HHsearch results for GI: 254781106 and protein with PDBid: 1yfb_A

>1yfb_A Transition state regulatory protein ABRB; , homodimer, bioinformatics, swapped-hairpin barrel, transcription; NMR {Bacillus subtilis} SCOP: b.129.1.3 PDB: 1ysf_A 2k1n_A* 1z0r_A 2ro4_A 2fy9_A 2ro3_A

Probab=94.40  E-value=0.06  Score=31.79  Aligned_cols=21  Identities=33%  Similarity=0.487  Sum_probs=10.5

Q ss_pred             CCCCCCEEECCHHHHHHCCCC
Q ss_conf             217861475198999870998
Q gi|254781106|r   87 KMDSEGRILMTDFIRVFTGIE  107 (145)
Q Consensus        87 ~~D~~GRi~ip~~lr~~agi~  107 (145)
                      .+|..|||+||..||.-.+|.
T Consensus        17 kiD~LGRIVIPkElRr~L~I~   37 (59)
T 1yfb_A           17 KVDELGRVVIPIELRRTLGIA   37 (59)
T ss_dssp             ECCTTCEEECCHHHHHHTTCC
T ss_pred             EECCCCCEEEEHHHHHHCCCC
T ss_conf             323688799229999775999