HHsearch results for GI: 254781106 and protein with PDBid: 1yfb_A
>1yfb_A Transition state regulatory protein ABRB; , homodimer, bioinformatics, swapped-hairpin barrel, transcription; NMR {Bacillus subtilis} SCOP: b.129.1.3 PDB: 1ysf_A 2k1n_A* 1z0r_A 2ro4_A 2fy9_A 2ro3_A
Probab=93.78 E-value=0.034 Score=33.29 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=25.6
Q ss_pred CCCEECCCCCEEECHHHHHHHHHCCCCCEEECCC
Q ss_conf 1210567662710788999985248984995165
Q gi|254781106|r 8 VTQKIDSKGRVSVPFVFRTILAQRCITDLYCFQD 41 (145)
Q Consensus 8 ~~~~lD~KGRi~iPa~fR~~L~~~~~~~lv~~~~ 41 (145)
.-++||+=||+.||...|+.|.-.....+-++..
T Consensus 14 ivRkiD~LGRIVIPkElRr~L~I~~~d~lEIfve 47 (59)
T 1yfb_A 14 IVRKVDELGRVVIPIELRRTLGIAEKDALEIYVD 47 (59)
T ss_dssp EEEECCTTCEEECCHHHHHHTTCCTTCEEEEEEE
T ss_pred EEEEECCCCCEEEEHHHHHHCCCCCCCCEEEEEE
T ss_conf 4873236887992299997759999990899980