HHsearch alignment for GI: 254781107 and conserved domain: cd05801
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=0 Score=799.39 Aligned_cols=486 Identities=28% Similarity=0.372 Sum_probs=398.6
Q ss_pred EECCCCCCCCCCCCCCCEEECCCC-CHHHHHHHHHHHHHHCC--CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 207876788887674204505444-17899999999997546--548838999647678689999999999978987999
Q gi|254781107|r 6 VPTVPYQDQKPGTSGLRKKVSVFQ-QNSYTENFIQAIFNNVD--CAEKTLVVGGDGRFYNHIVIQKIIKIAAANGFARII 82 (542)
Q Consensus 6 ~~~~~~~~l~FGT~GiRG~~~~~~-~~~~~~~~~~ai~~~~~--~~~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~ 82 (542)
T Consensus 13 ~~~~~~~ri~FGT~G~RG~~g~~~~n~~~v~~~~~al~~~~~~~~~~~~vvIG~D~R~~S~~~a~~aa~vl~a~Gi~V~l 92 (522)
T cd05801 13 DPSNPAQRVAFGTSGHRGSSLKGSFNEAHILAISQAICDYRKSQGITGPLFLGKDTHALSEPAFISALEVLAANGVEVII 92 (522)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 99986657665685126776899988999999999999999972999878999689867699999999999978987999
Q ss_pred ECCCCCCCCHHHHHHH------HHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 6789806507999999------8508981799957657989887773587368786578679889999997405000134
Q gi|254781107|r 83 IGKGGILSTPAVSHLI------RKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIE 156 (542)
Q Consensus 83 ~~~~gi~PTP~~~~av------~~~~~~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~ 156 (542)
T Consensus 93 ~~~~~~~PTP~vsfaV~~~~~~~~~~~a~GImITASHNP~eyN---GiK~~~~~G~~~~~~~~~~Ie~~~~~~~~~~~~~ 169 (522)
T cd05801 93 QQNDGYTPTPVISHAILTYNRGRTEGLADGIVITPSHNPPEDG---GFKYNPPHGGPADTDITRWIEKRANALLANGLKG 169 (522)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHC---CEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 3799847860899999987665531767349981588980568---6887568899699789999999998765403366
Q ss_pred CCCCCHHHCCHHCCCCCEEEEEEECHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEE
Q ss_conf 44687121031002575058984022267543320780322001337846998503554401221112310585012332
Q gi|254781107|r 157 ANDVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVR 236 (542)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~d~~~i~~~~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~~~~~~ 236 (542)
T Consensus 170 v~~~~~~~~----~~~~~~~~~d~~~~Y~~~l~~~vd~~~i~~---~~lkIv~d~~~Gag~~~~~~ll-~~~g~~v~~v- 240 (522)
T cd05801 170 VKRIPLEAA----LASGYTHRHDFVTPYVADLGNVIDMDAIRK---SGLRLGVDPLGGASVPYWQPIA-EKYGLNLTVV- 240 (522)
T ss_pred CCCCCHHHH----HCCCEEEEEECHHHHHHHHHHHCCHHHHCC---CCCEEEEECCCCCCCHHHHHHH-HHCCCCEEEE-
T ss_conf 676886575----016837986408999999987659655501---6976999668987411589999-8829987998-
Q ss_pred ECCCCCCCCCCCC--------CCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEC-CCCCCCCHHHHHHHHHHHHHC
Q ss_conf 0157875476446--------8542221047888612258607898648874568853-887227465999999999872
Q gi|254781107|r 237 NFIPLEDFGGCHP--------DPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMILG-KGIFVNPSDSLAIMVANAGLI 307 (542)
Q Consensus 237 ~~~pd~~F~~~~P--------nP~~~~~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd-~g~~i~~~d~l~ll~~~~~~~ 307 (542)
T Consensus 241 ~~~~dp~f~f~~~~~~g~i~~np~~p~~l~--~l~~~~~~~dlgiA~DgDaDR~~vvd~~g~~l~gd~i~~ll~~~ll~~ 318 (522)
T cd05801 241 NPKVDPTFRFMTLDHDGKIRMDCSSPYAMA--GLLKLKDKFDLAFANDPDADRHGIVTPSAGLMNPNHYLSVAIDYLFTH 318 (522)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHH--HHHHHHCCCCEEEECCCCCCCEEEEECCCCEECHHHHHHHHHHHHHHH
T ss_conf 982579999889899866578998889999--999742156746612787771489978982887899999999999971
Q ss_pred CCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEECC------CCCCCCCCHHHH
Q ss_conf 02047871687531083799998404761599828632665421026973886211230134------742157516789
Q gi|254781107|r 308 PGYATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTGS------NHSREKDGIWSI 381 (542)
Q Consensus 308 ~~~~~~~~~vv~t~~sS~~i~~ia~~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~~~------~~~~dkDgi~aa 381 (542)
T Consensus 319 r~~~~~~~~v~~Tvvss~~l~~ia~~~G~~~~~t~vGfK~i~~~m~~~~~~fGgEeS~G~~f~~~~g~~~~~dkDGi~aa 398 (522)
T cd05801 319 RPLWNKSAGVGKTLVSSSMIDRVAAALGRKLYEVPVGFKWFVDGLLDGSLGFGGEESAGASFLRRDGTVWTTDKDGIIMC 398 (522)
T ss_pred CCCCCCCCCEEEEECCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCEECCCCHHHHH
T ss_conf 50158886168872375999999998699479804827999999986894588714368677416885100367389999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCC
Q ss_conf 99999997246888999988998829661211001368778999999999987753165211564201000000011346
Q gi|254781107|r 382 LFWLNILAVRGESLLDIVHKHWATYGRNYYSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTN 461 (542)
Q Consensus 382 l~~le~la~~gk~l~d~l~el~~~yG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~~~~~~~ 461 (542)
T Consensus 399 ll~~e~~a~~gk~l~~ll~el~~~~G~~~y~~~~~~~~~~~k--~~~~~~--~~~~~~~~~~~g~~v~~~~~-----~~~ 469 (522)
T cd05801 399 LLAAEILAVTGKDPGQLYQELTERFGEPYYARIDAPATPEQK--ARLKKL--SPEQVTATELAGDPILAKLT-----RAP 469 (522)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHH--HHHHHC--CHHHCCCCHHCCCCCEEEEE-----CCC
T ss_conf 999999998696999999999998588753130156898999--999855--84325841205854012341-----155
Q ss_pred CCCCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 77374670899988991999975888878558999999528997899999999999999
Q gi|254781107|r 462 GNVSDKQGIRVVFDNHSRIIYRISGTDTENSTLRVYIDNYEPDSSKHLKNTQEMLSDLV 520 (542)
Q Consensus 462 ~~i~~~dGik~~~~d~~wiliRpSGTEPk~~~iRiy~E~~~~~~~~~l~~~~~~l~~li 520 (542)
T Consensus 470 ~~~~~idG~ki~~~dg-w~liRpSGTEPk---iRiy~Ea~~--~ee~~~~l~~~~~~~v 522 (522)
T cd05801 470 GNGASIGGLKVTTANG-WFAARPSGTEDV---YKIYAESFL--SEEHLKKIQKEAQEIV 522 (522)
T ss_pred CCCCCCCCEEEEECCE-EEEEECCCCHHH---HEEEECCCC--CHHHHHHHHHHHHHHC
T ss_conf 6655568779980885-899976472610---142572488--9899999999998559