HHsearch alignment for GI: 254781107 and conserved domain: cd05802

>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-acetylglucosamine, an essential precursor to components of the cell envelope. In order to be active, GlmM must be phosphorylated, which can occur via autophosphorylation or by the Ser/Thr kinase StkP. GlmM functions in a classical ping-pong bi-bi mechanism with glucosamine-1,6-diphosphate as an intermediate. Other members of the alpha-D-phosphohexomutase superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00  E-value=0  Score=664.56  Aligned_cols=419  Identities=23%  Similarity=0.313  Sum_probs=330.5

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCC--CCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHH
Q ss_conf             876742045054441789999999999754654--883899964767868999999999997898799967898065079
Q gi|254781107|r   16 PGTSGLRKKVSVFQQNSYTENFIQAIFNNVDCA--EKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPA   93 (542)
Q Consensus        16 FGT~GiRG~~~~~~~~~~~~~~~~ai~~~~~~~--~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP~   93 (542)
T Consensus         2 FGT~GiRG~~~~~lt~~~~~~ig~a~~~~~~~~~~~~~Vvvg~D~R~~s~~~~~~~~~gl~s~G~~V~~~---g~~pTP~   78 (434)
T cd05802           2 FGTDGIRGVANEPLTPELALKLGRAAGKVLGKGGGRPKVLIGKDTRISGYMLESALAAGLTSAGVDVLLL---GVIPTPA   78 (434)
T ss_pred             CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEC---CCCCHHH
T ss_conf             8999710036999999999999999999998469998699997999887999999999999869969991---8888599


Q ss_pred             HHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHCCCCC
Q ss_conf             99999850898179995765798988777358736878657867988999999740500013444687121031002575
Q gi|254781107|r   94 VSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELANM  173 (542)
Q Consensus        94 ~~~av~~~~~~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (542)
T Consensus        79 ~~~~v~~~~~~~Gi~ITASHNP~~~N---GiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~------~~~~~~~~------~  143 (434)
T cd05802          79 VAYLTRKLRADAGVVISASHNPFEDN---GIKFFSSDGYKLPDEVEEEIEALIDKELEL------PPTGEKIG------R  143 (434)
T ss_pred             HHHHHHHCCCCCEEEEECCCCCCCCC---CEEEECCCCCCCCHHHHHHHHHHHHCCCCC------CCCCCCCC------C
T ss_conf             99999964998138963688974028---489634678757989999999998378765------68601376------1


Q ss_pred             EEEEEEECHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             05898402226754332078032200133784699850355440122111231058501233201578754764468542
Q gi|254781107|r  174 TISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNL  253 (542)
Q Consensus       174 ~~~~~d~~~~Y~~~l~~~~d~~~i~~~~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~~~~~~~~~pd~~F~~~~PnP~~  253 (542)
T Consensus       144 ~~~~~d~~~~Y~~~l~~~~~~~~~-----~~lkvvvD~~~Ga~~~~~~~il-~~lG~~v~~~-~~~pdg~~~n~--~~~~  214 (434)
T cd05802         144 VYRIDDARGRYIEFLKSTFPKDLL-----SGLKIVLDCANGAAYKVAPEVF-RELGAEVIVI-NNAPDGLNINV--NCGS  214 (434)
T ss_pred             EEECCCHHHHHHHHHHHHCCHHHH-----CCCEEEEECCCCCHHHHHHHHH-HHCCCCEEEE-CCCCCCCCCCC--CCCC
T ss_conf             688500699999999875881441-----5988999899861245699999-8729844774-25788776789--9898


Q ss_pred             CCCCHHHHHHHCCCCCEEEEEECCCCCEEEEECC-CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHC
Q ss_conf             2210478886122586078986488745688538-872274659999999998720204787168753108379999840
Q gi|254781107|r  254 IHAKDLYDRMMMHDSADFGAACDGDGDRSMILGK-GIFVNPSDSLAIMVANAGLIPGYATGLVGVARSMPTSAALDRVAE  332 (542)
Q Consensus       254 ~~~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd~-g~~i~~~d~l~ll~~~~~~~~~~~~~~~~vv~t~~sS~~i~~ia~  332 (542)
T Consensus       215 ~~p~~l~-~~v~~~~aDlgia~DgD~DR~~~vd~~G~~i~~d~l~~l~a~~~l~~~~~~--~~~vv~tv~ss~~l~~~~~  291 (434)
T cd05802         215 THPESLQ-KAVLENGADLGIAFDGDADRVIAVDEKGNIVDGDQILAICARDLKERGRLK--GNTVVGTVMSNLGLEKALK  291 (434)
T ss_pred             CCHHHHH-HHHHHCCCCEEEEECCCCCEEEEECCCCCEECHHHHHHHHHHHHHHHCCCC--CCEEEEECCCCHHHHHHHH
T ss_conf             9979999-999855996788886998769999899978588999999999999850468--9879997344278999999


Q ss_pred             CCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEE-CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEE
Q ss_conf             47615998286326654210269738862112301-34742157516789999999972468889999889988296612
Q gi|254781107|r  333 KLNLKLFETPTGWKFFNNLLENGMITICGEESFGT-GSNHSREKDGIWSILFWLNILAVRGESLLDIVHKHWATYGRNYY  411 (542)
Q Consensus       333 ~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~-~~~~~~dkDgi~aal~~le~la~~gk~l~d~l~el~~~yG~~~~  411 (542)
T Consensus       292 ~~g~~~~~t~vG~k~i~~~m~~~~~~~ggE~sG~~~f~~~~~~~Dgi~aal~ile~l~~~~~~ls~l~~~~~~-y~~---  367 (434)
T cd05802         292 ELGIKLVRTKVGDRYVLEEMLKHGANLGGEQSGHIIFLDHSTTGDGLLTALQLLAIMKRSGKSLSELASDMKL-YPQ---  367 (434)
T ss_pred             HCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH-CCC---
T ss_conf             7699899943724999999996697797415475774588868989999999999999839999999987544-102---


Q ss_pred             EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCC
Q ss_conf             11001368778999999999987753165211564201000000011346773746708999889919999758888785
Q gi|254781107|r  412 SRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTEN  491 (542)
Q Consensus       412 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~~~~~~~~~i~~~dGik~~~~d~~wiliRpSGTEPk~  491 (542)
T Consensus       368 ~~~~~~-~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~d~~wvlvRpSgTEP~-  413 (434)
T cd05802         368 VLVNVR-VKDKKALLENPRVQA--------------------------------AIAEAEKELGGEGRVLVRPSGTEPL-  413 (434)
T ss_pred             EEECEE-CCCCCCHHHHHHHHH--------------------------------HHHHHHHHCCCCEEEEEECCCCCEE-
T ss_conf             014604-376421120288999--------------------------------9999998617977999981598416-


Q ss_pred             CEEEEEEEECCCC
Q ss_conf             5899999952899
Q gi|254781107|r  492 STLRVYIDNYEPD  504 (542)
Q Consensus       492 ~~iRiy~E~~~~~  504 (542)
T Consensus       414 --lriy~Ea~~~~  424 (434)
T cd05802         414 --IRVMVEGEDEE  424 (434)
T ss_pred             --EEEEEEECCHH
T ss_conf             --89999769999