HHSEARCH alignment of GI: 254781107 and SCOP domain: d3pmga4

Alignment

Probab=99.93  E-value=1.8e-26  Score=187.24  Aligned_cols=135  Identities=36%  Similarity=0.734  Sum_probs=128.4

Q ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHHHH--HHCCCCCCCC----CEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEE
Q ss_conf             6612110013687789999999999877--5316521156----420100000001134677374670899988991999
Q gi|254781107|r  408 RNYYSRYDYLGIPTEKAQDFMNDFRYRL--KNLIGSSFIG----QKIKQAGDFVYTDSTNGNVSDKQGIRVVFDNHSRII  481 (542)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~----~~v~~~~d~~~~~~~~~~i~~~dGik~~~~d~~wil  481 (542)
                      ++||+|+||+.++.+.+.++|+.++..+  +.+.++.+.+    .+|..+.||.|.|..++++++.||||+.|+||+|+.
T Consensus         1 RnyytRyDYE~v~s~~A~~~m~~L~~~~~~~~l~G~~~~~~~~~~~v~~aDdFsYtDPVDgSvs~~QGlRi~F~dGsRiV   80 (141)
T d3pmga4           1 RNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFADGSRII   80 (141)
T ss_dssp             EEEEEEEEEEEECHHHHHHHHHHHHHHHHSTTSTTCEEEETTEEEEEEEEEECCEECTTTCCEECCCCEEEEETTSCEEE
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCEEEEECCCCEEE
T ss_conf             98575677577887999999999998723734488754678850589865742555998985214885799972897899


Q ss_pred             EECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             9758888785589999995289978999999999999999999985066883789997579
Q gi|254781107|r  482 YRISGTDTENSTLRVYIDNYEPDSSKHLKNTQEMLSDLVEVSQRISCLRHYIGHTNPSIAS  542 (542)
Q Consensus       482 iRpSGTEPk~~~iRiy~E~~~~~~~~~l~~~~~~l~~li~~~~~~~~~~~~~~~~~~~~~~  542 (542)
                      +|.|||-..-..||+|+|.++++..++..+.|+.|+++|+.|+++++|++||||++|||+|
T Consensus        81 fRLSGTGs~GATiRlY~E~ye~d~~~~~~~~q~aL~~li~~Al~~s~i~~~tGr~~PtVIT  141 (141)
T d3pmga4          81 FRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT  141 (141)
T ss_dssp             EEEEECSSSCEEEEEEEEEEECCTTTTTSCHHHHHHHHHHHHHHHHTHHHHHCCSSCSEEC
T ss_pred             EEECCCCCCCCEEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             9945788998379999874058967707588999999999999997788886899997319

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Phosphoglucomutase, C-terminal domain
family: Phosphoglucomutase, C-terminal domain
domain: Phosphoglucomutase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]