RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254781107|ref|YP_003065520.1| phosphoglucomutase [Candidatus
Liberibacter asiaticus str. psy62]
         (542 letters)



>gnl|CDD|177942 PLN02307, PLN02307, phosphoglucomutase.
          Length = 579

 Score =  702 bits (1815), Expect = 0.0
 Identities = 297/567 (52%), Positives = 386/567 (68%), Gaps = 36/567 (6%)

Query: 6   VPTVPYQDQKPGTSGLRKKVSVFQQNSYTENFIQAIFNNV---DCAEKTLVVGGDGRFYN 62
           VPT P + QKPGTSGLRKKV VF Q +Y  NF+QA+FN +        TLV+GGDGR++N
Sbjct: 15  VPTKPIEGQKPGTSGLRKKVKVFMQENYLANFVQALFNALPAEKVKGATLVLGGDGRYFN 74

Query: 63  HIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRK---YKASGGIILTASHNPAGAT 119
              IQ IIKIAAANG  R+ +G+ G+LSTPAVS +IR+    KA+GG ILTASHNP G  
Sbjct: 75  KEAIQIIIKIAAANGVRRVWVGQNGLLSTPAVSAVIRERDGSKANGGFILTASHNPGGPE 134

Query: 120 QDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIE-ANDVDINHIGT---KELANMTI 175
           +DFGIKYN  SG  A E  T+ I+  +  I  Y++ E   DVD++ +G        +  +
Sbjct: 135 EDFGIKYNYESGQPAPESITDKIYGNTLTIKEYKMAEDIPDVDLSAVGVTKFGGPEDFDV 194

Query: 176 SVIDPIENYVALMENIFDFDAIRKLLSF-GFRIDIDCMNAVTGPYAKEILERKLGAPTGS 234
            VIDP+E+YV LM++IFDF+ I+KLLS   F    D M+ VTG YAK I   +LGAP  S
Sbjct: 195 EVIDPVEDYVKLMKSIFDFELIKKLLSRPDFTFCFDAMHGVTGAYAKRIFVEELGAPESS 254

Query: 235 VRNFIPLEDFGGCHPDPNLIHAKDLYDRMMMH------DSADFGAACDGDGDRSMILGKG 288
           + N +P EDFGG HPDPNL +AK+L  RM +       +  +FGAA DGDGDR+MILGK 
Sbjct: 255 LLNCVPKEDFGGGHPDPNLTYAKELVKRMGLGKTSYGDEPPEFGAASDGDGDRNMILGKR 314

Query: 289 IFVNPSDSLAIMVANA-GLIPGYATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKF 347
            FV PSDS+AI+ ANA   IP ++ GL GVARSMPTSAALD VA+KLNL  FE PTGWKF
Sbjct: 315 FFVTPSDSVAIIAANAQEAIPYFSGGLKGVARSMPTSAALDVVAKKLNLPFFEVPTGWKF 374

Query: 348 FNNLLENGMITICGEESFGTGSNHSREKDGIWSILFWLNILAVR------GESLL---DI 398
           F NL++ G ++ICGEESFGTGS+H REKDGIW++L WL+ILA +      G  L+   DI
Sbjct: 375 FGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKDVLPGGKLVTVEDI 434

Query: 399 VHKHWATYGRNYYSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQK-----IKQAGD 453
           V +HWATYGRN+YSRYDY  + +E A   M+     L++L+  S  G K     +  A D
Sbjct: 435 VREHWATYGRNFYSRYDYENVDSEAANKMMD----HLRDLVNKSKKGIKYGVYTLAFADD 490

Query: 454 FVYTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTENSTLRVYIDNYEPDSSKHLKNTQ 513
           F YTD  +G+VS KQGIR +F + SRII+R+SGT +  +T+R+YI+ YE D SKH ++ Q
Sbjct: 491 FEYTDPVDGSVSSKQGIRFLFTDGSRIIFRLSGTGSAGATIRLYIEQYEKDPSKHGRDAQ 550

Query: 514 EMLSDLVEVSQRISCLRHYIGHTNPSI 540
           E L  L++V+ ++S L+ + G + P++
Sbjct: 551 EALKPLIDVALKLSKLKEFTGRSKPTV 577


>gnl|CDD|181032 PRK07564, PRK07564, phosphoglucomutase; Validated.
          Length = 543

 Score =  667 bits (1725), Expect = 0.0
 Identities = 197/547 (36%), Positives = 284/547 (51%), Gaps = 57/547 (10%)

Query: 1   MLCTIVPTVPYQDQKPGTSGLRKKVSVFQQNSYTENFIQAIFNNVDCAEK------TLVV 54
                 PT P+QD K GTSG R       Q S+ EN I AIF  +            L V
Sbjct: 25  YTLKPDPTNPFQDVKFGTSGHRGSS---LQPSFNENHILAIFQAICEYRGKQGITGPLFV 81

Query: 55  GGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKYK-----ASGGIIL 109
           GGD    +   IQ  +++ AANG   +I+G+GG   TPAVSH I KY       + GI++
Sbjct: 82  GGDTHALSEPAIQSALEVLAANGVGVVIVGRGGYTPTPAVSHAILKYNGRGGGLADGIVI 141

Query: 110 TASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKE 169
           T SHNP    +D GIKYN  +GG A    T+ I   + ++ +Y +     + ++      
Sbjct: 142 TPSHNP---PEDGGIKYNPPNGGPADTDVTDAIEARANELLAYGLKGVKRIPLDRALAS- 197

Query: 170 LANMTISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILER--- 226
              MT+ VIDP+ +YV  +EN+FDFDAIRK    G R+ +D +   TGPY K I ER   
Sbjct: 198 ---MTVEVIDPVADYVEDLENVFDFDAIRK---AGLRLGVDPLGGATGPYWKAIAERYGL 251

Query: 227 ---KLGAPTGSVRNFIPLEDFGGCHPDPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSM 283
               + AP     NF+PL+D G    D +  +A  +   + + D+ D   A D DGDR  
Sbjct: 252 DLTVVNAPVDPTFNFMPLDDDGKIRMDCSSPYA--MAGLLALKDAFDLAFANDPDGDRHG 309

Query: 284 ILGKGIFVNPSDSLAIMVANA-GLIPGYATGLVGVARSMPTSAALDRVAEKLNLKLFETP 342
           I+  G  +NP+  LA+ +A      PG+  G  GV +++ +SA +DRVA KL  KL+E P
Sbjct: 310 IVTPGGLMNPNHYLAVAIAYLFHHRPGWRAG-AGVGKTLVSSAMIDRVAAKLGRKLYEVP 368

Query: 343 TGWKFFNNLLENGMITICGEESFGT------GSNHSREKDGIWSILFWLNILAVRGESLL 396
            G+K+F N L++G +   GEES G       GS  + +KDG+ ++L    ILAV G+S  
Sbjct: 369 VGFKWFVNGLDDGSLGFGGEESAGASFLRRDGSVWTTDKDGLIAVLLAAEILAVTGKSPS 428

Query: 397 DIVHKHWATYGRNYYSRYDYLGIPTEKAQDFMNDFRYRLKNLIG-SSFIGQKIKQAGDFV 455
           +I  + WA +GR YYSR+D    P +KA       R     L+G +   G  I    D  
Sbjct: 429 EIYRELWARFGRPYYSRHDAPATPEQKA-----ALRKLSPELVGATELAGDPI----DAS 479

Query: 456 YTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTENSTLRVYIDNYEPDSSKH--LKNTQ 513
            T++  GN +   G++VV +N      R SGT+T   T ++Y +++E D   H   K  Q
Sbjct: 480 LTEA-PGNGAAIGGLKVVTENG-WFAARPSGTET---TYKIYAESFEGDEHLHQIQKEAQ 534

Query: 514 EMLSDLV 520
           E+++DL+
Sbjct: 535 EIVADLI 541


>gnl|CDD|130202 TIGR01132, pgm, phosphoglucomutase, alpha-D-glucose
           phosphate-specific.  This enzyme interconverts
           alpha-D-glucose-1-P and alpha-D-glucose-6-P.
          Length = 543

 Score =  126 bits (319), Expect = 1e-29
 Identities = 135/481 (28%), Positives = 210/481 (43%), Gaps = 68/481 (14%)

Query: 69  IIKIAAANGFARIIIGKGGILSTPAVSHLIRKYKASG-----GIILTASHNPAGATQDFG 123
           ++++ AANG   I+    G   TPAVSH I  +   G     GI++T SHNP    +D G
Sbjct: 97  VLEVLAANGVEVIVQENNGFTPTPAVSHAILTHNKKGEPLADGIVITPSHNPP---EDGG 153

Query: 124 IKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIEN 183
           IKYN  +GG A  + T+ I + +  + +  +     + +     + LA+ T+   D ++ 
Sbjct: 154 IKYNPPNGGPADTEATQAIEDRANALLANGLKGVKRLPLA----QALASGTVKAHDLVQP 209

Query: 184 YVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILER-----KLGAP-TGSVRN 237
           YV  + +I D  AI+K    G R+ +D +      Y K I E+      L  P       
Sbjct: 210 YVDGLADIVDMAAIQKA---GLRLGVDPLGGSGIDYWKRIAEKYNLNLTLVNPQVDPTFR 266

Query: 238 FIPLEDFGGCHPD-------PNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMILGKGIF 290
           F+ L+  G    D         L+  +D Y         D     D D DR  I+     
Sbjct: 267 FMTLDKDGKIRMDCSSPYAMAGLLALRDKY---------DLAFGNDPDYDRHGIVTPAGL 317

Query: 291 VNPSDSLAIMVANAGLI---PGYATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKF 347
           +NP+  LA  VA   L    P +  G V V +++ +SA +DRV   L  +L E P G+K+
Sbjct: 318 MNPNHYLA--VAINYLFQHRPQWG-GDVAVGKTLVSSAMIDRVVADLGRQLVEVPVGFKW 374

Query: 348 FNNLLENGMITICGEESFGT------GSNHSREKDGIWSILFWLNILAVRGESLLDIVHK 401
           F + L +G     GEES G       G+  S +KDGI   L    I AV G++     ++
Sbjct: 375 FVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQQHYNE 434

Query: 402 HWATYGRNYYSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTN 461
             A +G   Y+R        +KA         RLK L         +  AGD +    T 
Sbjct: 435 LAAKFGAPSYNRIQAPATSAQKA---------RLKKLSPEMVSATTL--AGDPITARLTA 483

Query: 462 --GNVSDKQGIRVVFDNHSRIIYRISGTDTENSTLRVYIDNYEPDSSKHLKNTQEMLSDL 519
             GN +   G++V  DN      R SGT+      ++Y ++++    +HLK  ++   ++
Sbjct: 484 APGNGAAIGGLKVTTDN-GWFAARPSGTE---DVYKIYCESFK--GEEHLKQIEKEAVEI 537

Query: 520 V 520
           V
Sbjct: 538 V 538


>gnl|CDD|184616 PRK14316, glmM, phosphoglucosamine mutase; Provisional.
          Length = 448

 Score = 83.0 bits (206), Expect = 2e-16
 Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 48/207 (23%)

Query: 87  GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEES 146
           G++ TP V++L R   A  G++++ASHNP    +D GIK+  S G   S++Q ++I    
Sbjct: 75  GVIPTPGVAYLTRALGADAGVMISASHNPV---EDNGIKFFGSDGFKLSDEQEDEI---- 127

Query: 147 KKITSYQIIEANDVDINH-----IGTKELANMTISVIDPIENYVALMENIFDFDAIRKLL 201
                  +++A +  +       +GT           + +  Y+  +++  D D     L
Sbjct: 128 -----EALLDAEEDTLPRPSGEGLGTV------SDYPEGLRKYLQFLKSTIDED-----L 171

Query: 202 SFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLI------- 254
           S G ++ +DC N  T   A  +    LGA      +   +    G  PD   I       
Sbjct: 172 S-GLKVALDCANGATSSLAPRLF-ADLGA------DVTVI----GTSPDGLNINDGVGST 219

Query: 255 HAKDLYDRMMMHDSADFGAACDGDGDR 281
           H + L + ++    AD G A DGD DR
Sbjct: 220 HPEALQELVVEKG-ADLGLAFDGDADR 245


>gnl|CDD|130522 TIGR01455, glmM, phosphoglucosamine mutase.  This model describes
           GlmM, phosphoglucosamine mutase, also designated in MrsA
           and YhbF E. coli, UreC in Helicobacter pylori, and
           femR315 or FemD in Staphlococcus aureus. It converts
           glucosamine-6-phosphate to glucosamine-1-phosphate as
           part of the pathway toward UDP-N-acetylglucosamine for
           peptidoglycan and lipopolysaccharides.
          Length = 443

 Score = 80.9 bits (200), Expect = 7e-16
 Identities = 88/328 (26%), Positives = 134/328 (40%), Gaps = 58/328 (17%)

Query: 87  GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGS---ASEQQTEDIF 143
           G L TPAV++L R  +A  G++++ASHNP    +D GIK+    G     A+E   E + 
Sbjct: 73  GPLPTPAVAYLTRTLRADAGVMISASHNPY---EDNGIKFFGPGGFKLDDATEAAIEALL 129

Query: 144 EESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSF 203
           +E+  +           +   +G            D +  Y+      F    + + L+ 
Sbjct: 130 DEADPLPR--------PESEGLGR------VKRYPDAVGRYIE-----FLKSTLPRGLTL 170

Query: 204 -GFRIDIDCMNAVTGPYAKEILERKLGA--------PTGSVRNFIPLEDFGGCHPDPNLI 254
            G ++ +DC N      A  +  R+LGA        P G   N    +  G  H D    
Sbjct: 171 SGLKVVLDCANGAAYKVAPHVF-RELGAEVIAIGVEPDGLNIN----DGCGSTHLDA--- 222

Query: 255 HAKDLYDRMMMHDSADFGAACDGDGDRSMIL-GKGIFVNPSDSLAIMVANAGLIPGYATG 313
               L   +  H  AD G A DGD DR + +   G  V+  D +  ++A A    G   G
Sbjct: 223 ----LQKAVREHG-ADLGIAFDGDADRVLAVDANGRIVD-GDQILYIIARALKESGELAG 276

Query: 314 LVGVARSMPTSAALDRVAEKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTG----S 369
              VA  M ++  L+R  EKL L L  T  G ++    +      + GE+S   G     
Sbjct: 277 NTVVATVM-SNLGLERALEKLGLTLIRTAVGDRYVLEEMRESGYNLGGEQS---GHIILL 332

Query: 370 NHSREKDGIWSILFWLNILAVRGESLLD 397
           ++S   DGI S L  L I+  +  S L 
Sbjct: 333 DYSTTGDGIVSALQVLTIM-KKSGSTLS 359


>gnl|CDD|184614 PRK14314, glmM, phosphoglucosamine mutase; Provisional.
          Length = 450

 Score = 75.0 bits (185), Expect = 4e-14
 Identities = 84/329 (25%), Positives = 135/329 (41%), Gaps = 56/329 (17%)

Query: 87  GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSG---GSASEQQTEDIF 143
           G L TP ++ + R  +A  G++++ASHNP    QD GIK+ +S G       E + E + 
Sbjct: 77  GPLPTPGIAFITRSMRADAGVVISASHNPY---QDNGIKFFSSDGFKLPDEVELRIEAMV 133

Query: 144 EESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSF 203
             SK      + +A+ V                + D    Y+  ++  F     + L   
Sbjct: 134 -LSKDFDW-LLPDAHAVGKAK-----------RIDDAPGRYIVFLKATFP----KGLTLK 176

Query: 204 GFRIDIDCMNAVTGPYAKEILERKLGA--------PTGSVRNFIPLEDFGGCHPDPNLIH 255
           G +I +DC N      A  + E +LGA        P G   N       G  HP+     
Sbjct: 177 GLKIVLDCANGAAYKVAPAVFE-ELGAEVICIGVEPNGLNIN----AGCGSLHPE----- 226

Query: 256 AKDLYDRMMMHDSADFGAACDGDGDRS-MILGKGIFVNPSDSLAIMVANAGLIPGYATGL 314
              +   ++ H  AD G A DGD DR  ++  KG  V+  D +  + A      G     
Sbjct: 227 --VIAKAVIEH-GADLGIALDGDADRLIVVDEKGHIVD-GDQIMAICATDLKKRGALPKN 282

Query: 315 VGVARSMPTSAALDRVAEKLNLKLFETPTGWKF-FNNLLENGMITICGEES----FGTGS 369
             VA  M ++  L+   ++L  ++  TP G ++    +   G   + GE+S    F    
Sbjct: 283 TLVATVM-SNMGLEVAMKELGGQVLRTPVGDRYVVEEMRRGGAN-LGGEQSGHLIF---L 337

Query: 370 NHSREKDGIWSILFWLNILAVRGESLLDI 398
           +H+   DGI S L  L I+   G+ L ++
Sbjct: 338 DHNTTGDGILSALQVLRIMIESGKPLSEL 366


>gnl|CDD|184620 PRK14323, glmM, phosphoglucosamine mutase; Provisional.
          Length = 440

 Score = 72.5 bits (178), Expect = 2e-13
 Identities = 80/329 (24%), Positives = 131/329 (39%), Gaps = 72/329 (21%)

Query: 87  GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGS---ASEQQTEDIF 143
           G+L TP VS+L R   A+ G++++ASHNP    QD GIK+  + G     A+E + E + 
Sbjct: 77  GVLPTPGVSYLTRHLGATAGVVISASHNP---YQDNGIKFFGADGEKLPDAAELEIEALL 133

Query: 144 EESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSF 203
           +E                       ELA +T + I  + ++        DF     LLS 
Sbjct: 134 DE---------------------VPELAEVTGAGIGSVSDFTEAERLYLDF-----LLSH 167

Query: 204 -----GFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLED-------FGGCHPDP 251
                G ++ +DC N      A ++  +  GA    V       D        G  HP  
Sbjct: 168 APDLSGLKVALDCANGAAYRLAPKVF-QAAGA---DVFALFNTPDGRNINRGCGSTHP-- 221

Query: 252 NLIHAKDLYDRMMMHDSADFGAACDGDGDRSMILG-KGIFVNPSDSLAIMVANAGLIPGY 310
                 +   R ++    D G A DGD DR++ +  +G   +    L +   NA      
Sbjct: 222 ------EALQRFVVEGGLDLGVAFDGDADRALFVDRRGRLFHGDHMLYL---NA-----L 267

Query: 311 ATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTGS- 369
           A G   V  ++ ++ AL+    +  +    T  G ++ +  L    +T+ GE+S   G  
Sbjct: 268 ARGEKAVVGTVMSNMALEVKLREAGIAFHRTAVGDRYVHEKLHAKGLTLGGEQS---GHV 324

Query: 370 ---NHSREKDGIWSILFWLNILAVRGESL 395
              +H+   DG+ + L  L  +   G  L
Sbjct: 325 LFLDHAPTGDGVLTALLTLAAMKALGTDL 353


>gnl|CDD|185482 PTZ00150, PTZ00150, phosphoglucomutase-2-like protein; Provisional.
          Length = 584

 Score = 68.2 bits (167), Expect = 5e-12
 Identities = 122/546 (22%), Positives = 206/546 (37%), Gaps = 129/546 (23%)

Query: 17  GTSGLRKK----------VSVFQQNSYTENFIQAIFNNVDCAEKTLVVGGDGRFYNHIVI 66
           GT+GLR K          ++V Q       ++   F       + +V+G DGR+++    
Sbjct: 48  GTAGLRGKMGAGFNCMNDLTVQQTAQGLCAYVIETFGQ-ALKSRGVVIGYDGRYHSRRFA 106

Query: 67  QKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKY 126
           +    +  + GF   + G+   + TP V + +RK K   G+++TASHNP    +D G K 
Sbjct: 107 EITASVFLSKGFKVYLFGQ--TVPTPFVPYAVRKLKCLAGVMVTASHNP---KEDNGYKV 161

Query: 127 NTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELANMT-----------I 175
             S+G                     QII  +D +I+    K L+N+             
Sbjct: 162 YWSNGA--------------------QIIPPHDKNIS---AKILSNLEPWSSSWEYLTET 198

Query: 176 SVIDPI----ENYVALMENIFDFDAIR--KLLSFGFRIDIDCMNAVTGPYAKEILERKLG 229
            V DP+    + Y A +++ ++       K+     +I    M+ V   + ++ L   +G
Sbjct: 199 LVEDPLAEVSDAYFATLKSEYNPACCDRSKV-----KIVYTAMHGVGTRFVQKALH-TVG 252

Query: 230 APTGSVRNFIPLEDFGGCHPD--------PNLIHAKDLYDRMMMHDSADFGA----ACDG 277
            P     N + +       PD        PN    K     + M  +   G+    A D 
Sbjct: 253 LP-----NLLSVAQ--QAEPDPEFPTVTFPNPEEGKGALK-LSMETAEAHGSTVVLANDP 304

Query: 278 DGDRSMI---LGKGIFVNPSDSLAIMVA------NAGLIPGYATGLVGVARSMPTSAALD 328
           D DR  +   L  G  +   + L  ++A            G          ++ +S  L 
Sbjct: 305 DADRLAVAEKLNNGWKIFTGNELGALLAWWAMKRYRRQ--GIDKSKCFFICTVVSSRMLK 362

Query: 329 RVAEKLNLKLFETPTGWKFFNNLL-----ENGMITI-CGEESFGTG-SNHSREKDGIWSI 381
           ++AEK   +  ET TG+K+  N       ENG+ T+   EE+ G       R+KDG+ + 
Sbjct: 363 KMAEKEGFQYDETLTGFKWIGNKAIELNAENGLTTLFAYEEAIGFMLGTRVRDKDGVTAA 422

Query: 382 LFWLNI---LAVRGESLLDIVHKHWATYG----RN-YYSRYDYLGIPTEKA---QDFMND 430
                +   L  RG++L++ +   +  YG     N YY  YD    P+       D  N+
Sbjct: 423 AVVAEMALYLYERGKTLVEHLESLYKQYGYHFTNNSYYICYD----PSRIVSIFNDIRNN 478

Query: 431 FRYRLKNLIGSSFIGQKIKQAGDF-VYTDSTN-------GNVSDKQGIRVVFDNHSRIIY 482
             Y       +   G  + +  D     D+            +  Q I   F+N + I  
Sbjct: 479 GSYP------TKLGGYPVTRIRDLTTGYDTATPDGKPLLPVSASTQMITFYFENGAIITI 532

Query: 483 RISGTD 488
           R SGT+
Sbjct: 533 RGSGTE 538


>gnl|CDD|184621 PRK14324, glmM, phosphoglucosamine mutase; Provisional.
          Length = 446

 Score = 62.7 bits (153), Expect = 2e-10
 Identities = 98/377 (25%), Positives = 160/377 (42%), Gaps = 83/377 (22%)

Query: 28  FQQNSYTENFIQAIFNNVDCAEKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGG 87
           F+++S T                 ++VG D R   +++   ++    + G+  I IG   
Sbjct: 33  FKKHSITNK---------------ILVGKDTRRSGYMIENALVSGLTSVGYNVIQIGP-- 75

Query: 88  ILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSG---GSASEQQTEDIFE 144
            + TPA++ L    +   GI+++ASHNP     D GIK+  S G       E++ E+IF 
Sbjct: 76  -MPTPAIAFLTEDMRCDAGIMISASHNP---YYDNGIKFFDSYGNKLDEEEEKEIEEIFF 131

Query: 145 ESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSF- 203
           + +      +I+++      IG+ +       + D I  Y+  ++N F      K L+  
Sbjct: 132 DEE------LIQSSQKTGEEIGSAK------RIDDVIGRYIVHIKNSFP-----KDLTLK 174

Query: 204 GFRIDIDCMNAVTGPYAKEILERKLGA--------PTGSVRNFIPLEDFGGCHPDPNLIH 255
           G RI +D  N      A  +   +LGA        P G   N    E+ G  HP+     
Sbjct: 175 GLRIVLDTANGAAYKVAPTVFS-ELGADVIVINDEPNGFNIN----ENCGALHPENLAQE 229

Query: 256 AKDLYDRMMMHDSADFGAACDGDGDRSMILG-KGIFVNPSDS----LAIMVANAGLIPGY 310
            K           AD G A DGD DR +++  KG  V+  D     LA+ +   G +   
Sbjct: 230 VKRY--------RADIGFAFDGDADRLVVVDEKGEIVH-GDKLLGVLAVYLKEKGALKSQ 280

Query: 311 ATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKF-FNNLLENGMITICGEES----F 365
           A     VA  M ++ AL+   +K  ++L     G K+    + ENG I   GE+S    F
Sbjct: 281 AI----VATVM-SNLALEEYLKKHGIELKRCNVGDKYVLECMKENG-INFGGEQSGHIIF 334

Query: 366 GTGSNHSREKDGIWSIL 382
              S++++  DG+ S L
Sbjct: 335 ---SDYAKTGDGLVSAL 348


>gnl|CDD|172796 PRK14320, glmM, phosphoglucosamine mutase; Provisional.
          Length = 443

 Score = 58.9 bits (142), Expect = 3e-09
 Identities = 76/317 (23%), Positives = 129/317 (40%), Gaps = 60/317 (18%)

Query: 17  GTSGLRKKVSVFQQNSYTENFIQAIFN------NVDCAEKTLVVGGDGRFYNHIVIQKII 70
           GT G+R +V+    ++ T  F Q + N      N     K ++VG D R          +
Sbjct: 6   GTDGIRGEVA---NSTITVEFTQKLGNAVGSLINQKNYPKFVIVGQDTRSSG-----GFL 57

Query: 71  KIAAANGF--ARIIIGKGGILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNT 128
           K A  +G   A I +   G++ TP V+ +  K++A+ G ++TASHN      D GIK  +
Sbjct: 58  KFALVSGLNAAGIDVLDLGVVPTPVVAFMTVKHRAAAGFVITASHN---KFTDNGIKLFS 114

Query: 129 SSG---GSASEQQTED------IFEESKKITSYQIIEANDVDINHIGTKELANMTISVID 179
           S+G     A E++ ED      I++   K  SY+I+                       +
Sbjct: 115 SNGFKLDDALEEEVEDMIDGDFIYQPQFKFGSYKILA----------------------N 152

Query: 180 PIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFI 239
            I+ Y+   E+I    A  K +++  ++ +DC +       + +L++          N  
Sbjct: 153 AIDEYI---ESIHSRFA--KFVNYKGKVVVDCAHGAASHNFEALLDKFGINYVSIASNPD 207

Query: 240 PLEDFGGCHPDPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMILGKGIFVNPSDSLAI 299
            L    GC              + +    AD G + DGD DR +I+ +       D +  
Sbjct: 208 GLNINVGCGAT-----CVSNIKKAVKEQKADLGISLDGDADRIIIVDENGQEIDGDGILN 262

Query: 300 MVANAGLIPGYATGLVG 316
           ++A    I G   G+VG
Sbjct: 263 ILAQYSDICGGTNGIVG 279


>gnl|CDD|184617 PRK14317, glmM, phosphoglucosamine mutase; Provisional.
          Length = 465

 Score = 56.9 bits (138), Expect = 1e-08
 Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 49/219 (22%)

Query: 87  GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSAS-EQQTEDIFEE 145
           G+  TPAV++L RK +A GG++++ASHNP    +D GIK+  + G   S E Q       
Sbjct: 90  GLCPTPAVAYLTRKSEAIGGLMISASHNPP---EDNGIKFFGADGTKLSPELQ------- 139

Query: 146 SKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDF--DAIRKLLSF 203
                    IEA       +  +  ++   S      +   L+++  D   +++   ++ 
Sbjct: 140 -------AQIEA------GLRGELSSSDNASNWGRHYHRPELLDDYRDALLESLPDRVNL 186

Query: 204 -GFRIDID-CMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLI------- 254
            G +I +D    A      +  + + LGA        I L D     PD + I       
Sbjct: 187 QGVKIVLDLAWGAAVACAPE--VFKALGA------EVICLHD----QPDGDRINVNCGST 234

Query: 255 HAKDLYDRMMMHDSADFGAACDGDGDRSM-ILGKGIFVN 292
           H + L   ++ H  AD G A DGD DR + + G+G  V+
Sbjct: 235 HLEPLQAAVLEHG-ADMGFAFDGDADRVLAVDGQGRVVD 272


>gnl|CDD|182812 PRK10887, glmM, phosphoglucosamine mutase; Provisional.
          Length = 443

 Score = 57.1 bits (139), Expect = 1e-08
 Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 48/230 (20%)

Query: 87  GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEES 146
           G + TPAV++L R  +A  GI+++ASHNP     D GIK+ ++ G         D  E +
Sbjct: 74  GPMPTPAVAYLTRTLRAEAGIVISASHNP---YYDNGIKFFSADGTKLP-----DEVELA 125

Query: 147 KKITSYQIIEAN-DVDINHIGTKEL--ANMTISVIDPIENYVALMENIFDFDAIRKLLSF 203
                   IEA  D  +  + + EL  A+    + D    Y+   ++ F  +     LS 
Sbjct: 126 --------IEAELDKPLTCVESAELGKAS---RINDAAGRYIEFCKSTFPNE-----LSL 169

Query: 204 -GFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLI-------H 255
            G +I +DC N  T   A  +  R+LGA        I +    GC P+   I        
Sbjct: 170 RGLKIVVDCANGATYHIAPNVF-RELGA------EVIAI----GCEPNGLNINDECGATD 218

Query: 256 AKDLYDRMMMHDSADFGAACDGDGDR-SMILGKGIFVNPSDSLAIMVANA 304
            + L   ++    AD G A DGDGDR  M+   G  V+    L I+  + 
Sbjct: 219 PEALQAAVLAE-KADLGIAFDGDGDRVIMVDHLGNLVDGDQLLYIIARDR 267


>gnl|CDD|172797 PRK14321, glmM, phosphoglucosamine mutase; Provisional.
          Length = 449

 Score = 52.9 bits (127), Expect = 2e-07
 Identities = 77/280 (27%), Positives = 110/280 (39%), Gaps = 72/280 (25%)

Query: 49  EKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKYKASGGII 108
              +VVG D R  + ++   +I    + G   I IG   +  TP     I+ Y A  G+ 
Sbjct: 36  GGKVVVGKDTRTSSEMLKNALISGLLSTGVDVIDIG---LAPTPLTGFAIKLYNADAGVT 92

Query: 109 LTASHNPAGATQDFGIKYNTSSG---GSASEQQTEDIFEESKKITSYQIIEANDVDINHI 165
           +TASHNP    +  GIK    +G       E + E I E               V  N I
Sbjct: 93  ITASHNPP---EYNGIKVWQRNGMAYTPEMENELERIIESGN---------FKRVPWNEI 140

Query: 166 GTKELANMTISVIDPIENYV-ALMENIFDFDAIRKLLSFGFRIDIDCMN---AVTGPYAK 221
           GT   A       DP E Y+ A +E I         L   + + +D  N   ++  PY  
Sbjct: 141 GTLRRA-------DPKEEYIKAALEMIK--------LENSYTVVVDSGNGAGSILSPY-- 183

Query: 222 EILERKLGAPTGSVRNFIPLEDFGGCHP--------DPNLIHAKDL--YDRMMMHDSADF 271
             L+R+LG    S+ +          HP        +PN   AK L    + +    AD 
Sbjct: 184 --LQRELGNKVISLNS----------HPSGFFVRELEPN---AKSLSMLAKTVKVLKADV 228

Query: 272 GAACDGDGDR-SMILGKGIFVNPSDSLAIMVANAGLIPGY 310
           G A DGD DR  ++  +G FV       +M++   LI GY
Sbjct: 229 GIAHDGDADRIGVVDDQGNFVE----YEVMLS---LIAGY 261


>gnl|CDD|184618 PRK14318, glmM, phosphoglucosamine mutase; Provisional.
          Length = 448

 Score = 49.2 bits (118), Expect = 3e-06
 Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 87  GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEE 145
           G+L TPAV++L     A  G++++ASHNP     D GIK+  ++GG       ED  E 
Sbjct: 79  GVLPTPAVAYLTAALDADFGVMISASHNPM---PDNGIKF-FAAGGHKLPDDVEDRIEA 133


>gnl|CDD|185312 PRK15414, PRK15414, phosphomannomutase CpsG; Provisional.
          Length = 456

 Score = 46.9 bits (111), Expect = 2e-05
 Identities = 65/248 (26%), Positives = 103/248 (41%), Gaps = 31/248 (12%)

Query: 50  KTLVVGGDGRFYNHIVIQKIIKIAAANGF--ARIIIGKGGILSTPAVSHLIRKYKASGGI 107
           KT+V+GGD R     +  + +K+A A G   A + +   G+  T  +          GGI
Sbjct: 39  KTIVLGGDVR-----LTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGI 93

Query: 108 ILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGT 167
            +TASHNP        + YN   G     +    I  ++      ++ EAND        
Sbjct: 94  EVTASHNP--------MDYN---GMKLVREGARPISGDTGLRDVQRLAEANDFPP----V 138

Query: 168 KELANMTISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILER- 226
            E        I+  + YV   +++F +  ++ L     ++ I+  N   GP    I  R 
Sbjct: 139 DETKRGRYQQINLRDAYV---DHLFGYINVKNLTPL--KLVINSGNGAAGPVVDAIEARF 193

Query: 227 -KLGAPTGSVR-NFIPLEDFGGCHPDPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMI 284
             LGAP   ++ +  P  +F    P+P L   +D     ++   AD G A DGD DR  +
Sbjct: 194 KALGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFL 253

Query: 285 LG-KGIFV 291
              KG F+
Sbjct: 254 FDEKGQFI 261


>gnl|CDD|184615 PRK14315, glmM, phosphoglucosamine mutase; Provisional.
          Length = 448

 Score = 46.1 bits (110), Expect = 2e-05
 Identities = 74/273 (27%), Positives = 107/273 (39%), Gaps = 54/273 (19%)

Query: 87  GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSAS---EQQTEDIF 143
           G + TPAV+ L R  +A  G++++ASHNP    +D GIK     G   S   E + E + 
Sbjct: 77  GPIPTPAVAMLTRSMRADLGVMISASHNPF---EDNGIKLFGPDGFKLSDEIELEIEALL 133

Query: 144 EESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSF 203
           +          ++        IG  +       + D    Y+   +        R L   
Sbjct: 134 DGD--------LDKRLAAPADIGRAK------RIDDAHGRYIEFAKRTLP----RDLRLD 175

Query: 204 GFRIDIDCMNAVTGPYAKEILERKLGA--------PTGSVRNFIPLEDFGGCHPDPNLIH 255
           G R+ +DC N      A E L  +LGA        P G   N    E+ G  HP+   + 
Sbjct: 176 GLRVVVDCANGAAYKVAPEAL-WELGAEVITIGVEPNGFNIN----EECGSTHPE--ALA 228

Query: 256 AKDLYDRMMMHDSADFGAACDGDGDRSMILG-KGIFVNPSDSLAIMV---ANAGLIPGYA 311
            K    R      AD G A DGD DR +I+  KG  V+    +A++    A  G + G  
Sbjct: 229 KKVREVR------ADIGIALDGDADRVIIVDEKGHVVDGDQLMALIAESWAEDGRLRGGG 282

Query: 312 TGLVGVARSMPTSAALDRVAEKLNLKLFETPTG 344
                VA  M ++  L+R      L L  T  G
Sbjct: 283 I----VATVM-SNLGLERFLADRGLTLERTAVG 310


>gnl|CDD|184619 PRK14322, glmM, phosphoglucosamine mutase; Provisional.
          Length = 429

 Score = 44.6 bits (105), Expect = 6e-05
 Identities = 74/280 (26%), Positives = 115/280 (41%), Gaps = 36/280 (12%)

Query: 87  GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEES 146
           GIL TPAV+ L R  + S G++++ASHNP       GIK     GG     + E   EE 
Sbjct: 72  GILPTPAVALLTRITR-SFGVVISASHNPPEYN---GIK--VLKGGYKIPDEMEVEIEER 125

Query: 147 KKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYV-ALMENIFDFDAIRKLLSFGF 205
            +   +               + +   T S  +  + Y+ A++E   D D   +++S   
Sbjct: 126 IESGYFP-------------VRSVVGRTKSFREGRDMYIGAVLEMFRDLDLTGEMVS--- 169

Query: 206 RIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLIHAKDLYDRMMM 265
              +D  N  T   AKE+ E  LGA    V  F   +D    +      H + L + M  
Sbjct: 170 ---LDLANGATTTTAKEVFEF-LGA---KVEVFNDSQDGLLINQGCGATHPRFLAEEM-- 220

Query: 266 HDSADFGAACDGDGDRSMILGKGIFVNPSDSLAIMVANAGLIPGYATGLVGVARSMPTSA 325
             +   G   DGDGDR + + +   V   D +  ++A      G       V   M T+ 
Sbjct: 221 -KNGKVGFTFDGDGDRVIAVDEERNVVNGDRIIGILAVGLKEEGRLNSDTVVGTVM-TNG 278

Query: 326 ALDRVAEKLNLKLFETPTGWKF-FNNLLENGMITICGEES 364
            L+   ++  +KL  T  G K+    +LE+G   + GE S
Sbjct: 279 GLEDFLKERGIKLLRTKVGDKYVLEKMLESGA-NLGGERS 317


>gnl|CDD|177999 PLN02371, PLN02371, phosphoglucosamine mutase family protein.
          Length = 583

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 62/237 (26%), Positives = 95/237 (40%), Gaps = 57/237 (24%)

Query: 75  ANGFARIIIGKG------GILSTPAV--SHLIRKYKASGGIILTASHNPAGATQDFGIKY 126
           A+     +   G      G+ +TPA+  S L  +      I++TASH P       G+K+
Sbjct: 132 ADAVFAGLASAGLDVVDMGLATTPAMFMSTLTEREDYDAPIMITASHLPYNRN---GLKF 188

Query: 127 NTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVA 186
            T  GG       +DI E + +I           D   + +   A+  +  +D +  Y  
Sbjct: 189 FTKDGGLGKP-DIKDILERAARIY------KEWSDEGLLKSSSGASSVVCRVDFMSTYAK 241

Query: 187 LMENIFDFDAIRKLLSF---------GFRIDIDCMNAVTGPYAKEILERKLGAPT-GSVR 236
            +      DAI++ +           GF+I +D  N   G +A+++LE  LGA T GS+ 
Sbjct: 242 HLR-----DAIKEGVGHPTNYETPLEGFKIVVDAGNGAGGFFAEKVLE-PLGADTSGSLF 295

Query: 237 NFIPLEDFGGCHPD---PNLIHAKDLYDRMMM--------HDSADFGAACDGDGDRS 282
               LE      PD   PN  H  +  D+  M         + AD G   D D DRS
Sbjct: 296 ----LE------PDGMFPN--HIPNPEDKAAMSATTQAVLANKADLGIIFDTDVDRS 340


>gnl|CDD|172795 PRK14319, glmM, phosphoglucosamine mutase; Provisional.
          Length = 430

 Score = 37.5 bits (87), Expect = 0.009
 Identities = 70/279 (25%), Positives = 110/279 (39%), Gaps = 57/279 (20%)

Query: 17  GTSGLRKKVSVFQQNSYTENFIQAIFNNVDCAEKTLVVGGDGRFYNHIVIQKIIKIAAAN 76
           GT G+R  V+ F           A+ N VD   K + +  D R    ++   ++    + 
Sbjct: 5   GTDGIRGVVNEFLTPEIAFRLGNALGNMVD---KKIFIAKDTRASGDMLEAALVAGITSA 61

Query: 77  GFARIIIGKGGILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASE 136
           G     + + G+L TPA++ LI K + + G++++ASHNP       G+K     G    +
Sbjct: 62  G---ADVYRCGVLPTPALA-LITKLEDAAGVMISASHNPPEYN---GLKV-LMRGYKLPD 113

Query: 137 QQTEDIFEESKKI--TSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDF 194
           +  E I +E  +I  + Y          N +G          VID    Y    E  F++
Sbjct: 114 EVEERIEKEMNEIHYSPY----------NEVG---------CVID----YKLAFEEYFNY 150

Query: 195 DAIRKLLSF----GFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRN----FIPLEDFGG 246
             I++        G +I +D  N  T      ILE   GA    V N    F    D G 
Sbjct: 151 --IKQQYEGLDLSGIKIVVDVANGATYELNPYILE-YFGAKVEVVNNTPDGFNINVDCGS 207

Query: 247 CHPDPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMIL 285
            HP       ++  +++  H         DGDGDR + L
Sbjct: 208 THP-------ENAKEKITNH---KIAILHDGDGDRCIFL 236


>gnl|CDD|181937 PRK09542, manB, phosphomannomutase/phosphoglucomutase; Reviewed.
          Length = 445

 Score = 36.1 bits (84), Expect = 0.025
 Identities = 65/259 (25%), Positives = 99/259 (38%), Gaps = 76/259 (29%)

Query: 72  IAAANGFARIIIGKG------GILSTPAVSHLIRKYKASG-----GIILTASHNPAGATQ 120
           +AAA  FA  +  +G      G+ ST  +      Y ASG     G + TASHNPA    
Sbjct: 51  LAAA--FAEGVTAQGLDVVRIGLASTDQL------YFASGLLDCPGAMFTASHNPA---A 99

Query: 121 DFGIKYNTSSGGSASEQQT--EDIFEESKKITSYQIIEANDVDINHIGTKELANMTISVI 178
             GIK    +G     Q T    I ++                I  +   +    T++  
Sbjct: 100 YNGIKL-CRAGAKPVGQDTGLAAIRDDL---------------IAGVPAYDGPPGTVTER 143

Query: 179 DPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNF 238
           D + +Y A + ++ D   IR L     ++ +D  N + G     +L              
Sbjct: 144 DVLADYAAFLRSLVDLSGIRPL-----KVAVDAGNGMGGHTVPAVLGG------------ 186

Query: 239 IPLE------DFGGCHP-------DP-NLIHAKDLYDRMMMHDSADFGAACDGDGDRSMI 284
           +P+       +  G  P       DP NL+   DL   +     AD G A DGD DR  +
Sbjct: 187 LPITLLPLYFELDGTFPNHEANPLDPANLV---DLQAFVRET-GADIGLAFDGDADRCFV 242

Query: 285 LG-KGIFVNPSDSLAIMVA 302
           +  +G  V+PS   A++ A
Sbjct: 243 VDERGQPVSPSAVTALVAA 261


>gnl|CDD|178483 PLN02895, PLN02895, phosphoacetylglucosamine mutase.
          Length = 562

 Score = 32.3 bits (74), Expect = 0.32
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 3/27 (11%)

Query: 106 GIILTASHNPAGATQDFGIKYNTSSGG 132
           G+++TASHNP     D G+K    SGG
Sbjct: 61  GLMITASHNPVS---DNGVKIVDPSGG 84


>gnl|CDD|164792 PHA00363, PHA00363, major capsid protein.
          Length = 557

 Score = 31.4 bits (71), Expect = 0.65
 Identities = 15/57 (26%), Positives = 23/57 (40%)

Query: 407 GRNYYSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGN 463
           G    S +DY G+PT+ A        +R  NLI + +   +  Q    V    T  +
Sbjct: 123 GFAEGSIHDYFGLPTKVAGIRCVALWHRAYNLIWNQYYRDENLQESVAVQMGDTTSD 179


>gnl|CDD|185546 PTZ00302, PTZ00302, N-acetylglucosamine-phosphate mutase;
           Provisional.
          Length = 585

 Score = 31.2 bits (71), Expect = 0.74
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 3/20 (15%)

Query: 106 GIILTASHNPAGATQDFGIK 125
           G+++TASHNP    QD G+K
Sbjct: 78  GVMITASHNPI---QDNGVK 94


>gnl|CDD|151838 pfam11398, DUF2813, Protein of unknown function (DUF2813).  Some
           members in this family of proteins are annotated as YjbD
           however this cannot be confirmed. Currently there is no
           known function.
          Length = 183

 Score = 30.8 bits (70), Expect = 1.1
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 3/29 (10%)

Query: 475 DNHSRIIYRISGTDTEN---STLRVYIDN 500
           D   RI YR+SG   E+   +T   ++DN
Sbjct: 23  DGLQRIYYRVSGELNEDGNVTTTYSFLDN 51


>gnl|CDD|178450 PLN02859, PLN02859, glutamine-tRNA ligase.
          Length = 788

 Score = 30.5 bits (69), Expect = 1.1
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%)

Query: 221 KEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLIHAKDLYDRMMMHDSADFGAACDGDG 279
           KEILE+ L A  G V    P E  G  H    + HAK ++         DFG A +  G
Sbjct: 251 KEILEKHLKATGGKVYTRFPPEPNGYLH----IGHAKAMF--------VDFGLAKERGG 297


>gnl|CDD|150454 pfam09787, Golgin_A5, Golgin subfamily A member 5.  Members of this
           family of proteins are involved in maintaining Golgi
           structure. They stimulate the formation of Golgi stacks
           and ribbons, and are involved in intra-Golgi retrograde
           transport. Two main interactions have been
           characterized: one with RAB1A that has been activated by
           GTP-binding and another with isoform CASP of CUTL1.
          Length = 508

 Score = 29.8 bits (67), Expect = 1.9
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 490 ENSTLRVYIDNYEPDSSKHLKNTQEMLSDLVEVSQRISCLRHYIGH 535
            ++ ++ +  N        LK T ++     E+++R + LRH   H
Sbjct: 164 LDAAVKRHDGNVITAVLIFLKRTLKLEILFQELAERQTALRHLSKH 209


>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional.
          Length = 252

 Score = 28.8 bits (65), Expect = 3.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 194 FDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGA 230
           F  IR+    G R+DI   NA   PY   IL+  LGA
Sbjct: 76  FAHIRE--RHG-RLDILVNNAAANPYFGHILDTDLGA 109


>gnl|CDD|184126 PRK13539, PRK13539, cytochrome c biogenesis protein CcmA;
           Provisional.
          Length = 207

 Score = 28.3 bits (64), Expect = 5.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)

Query: 97  LIRKYKASGGIILTASHNPAG 117
           LIR + A GGI++ A+H P G
Sbjct: 169 LIRAHLAQGGIVIAATHIPLG 189


>gnl|CDD|162037 TIGR00785, dass, anion transporter.  Functionally characterized
           proteins of the DASS family transport (1) organic di-
           and tricarboxylates of the Krebs Cycle as well as
           dicarboxylate amino acid, (2) inorganic sulfate and (3)
           phosphate. The animal NaDC-1 cotransport 3 Na+ with each
           dicarboxylate. Protonated tricarboxylates are also
           cotransported with 3Na+.
          Length = 444

 Score = 28.1 bits (63), Expect = 5.4
 Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 5/57 (8%)

Query: 297 LAIMVANA-GLI----PGYATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKFF 348
           LAI VA   G I    P   T L+ +         L     K  L  F  PT W FF
Sbjct: 14  LAIFVAAIVGWILEPLPLPVTALLAIPIIAVLLGVLSAFKFKNALSGFADPTIWLFF 70


>gnl|CDD|177308 PHA00743, PHA00743, helix-turn-helix protein.
          Length = 51

 Score = 27.8 bits (62), Expect = 8.1
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 197 IRKLLSFGFRIDIDCMNAVTGPYAKEILERKL 228
           +R+LLS    I ID    +T  Y KE +E+ +
Sbjct: 8   VRELLSIIHEIKID---IITQSYDKEKIEKAI 36


>gnl|CDD|179098 PRK00724, PRK00724, formate dehydrogenase accessory protein;
           Reviewed.
          Length = 263

 Score = 27.4 bits (62), Expect = 9.3
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)

Query: 317 VARSMPTSAALDRVAEKLNLKL 338
           VA S PTS A+  +AE+L L L
Sbjct: 226 VAVSAPTSLAV-ELAEELGLTL 246


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.319    0.137    0.403 

Gapped
Lambda     K      H
   0.267   0.0701    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 9,025,072
Number of extensions: 606547
Number of successful extensions: 1239
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1203
Number of HSP's successfully gapped: 40
Length of query: 542
Length of database: 5,994,473
Length adjustment: 98
Effective length of query: 444
Effective length of database: 3,876,889
Effective search space: 1721338716
Effective search space used: 1721338716
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (26.9 bits)