RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254781107|ref|YP_003065520.1| phosphoglucomutase [Candidatus Liberibacter asiaticus str. psy62] (542 letters) >gnl|CDD|177942 PLN02307, PLN02307, phosphoglucomutase. Length = 579 Score = 702 bits (1815), Expect = 0.0 Identities = 297/567 (52%), Positives = 386/567 (68%), Gaps = 36/567 (6%) Query: 6 VPTVPYQDQKPGTSGLRKKVSVFQQNSYTENFIQAIFNNV---DCAEKTLVVGGDGRFYN 62 VPT P + QKPGTSGLRKKV VF Q +Y NF+QA+FN + TLV+GGDGR++N Sbjct: 15 VPTKPIEGQKPGTSGLRKKVKVFMQENYLANFVQALFNALPAEKVKGATLVLGGDGRYFN 74 Query: 63 HIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRK---YKASGGIILTASHNPAGAT 119 IQ IIKIAAANG R+ +G+ G+LSTPAVS +IR+ KA+GG ILTASHNP G Sbjct: 75 KEAIQIIIKIAAANGVRRVWVGQNGLLSTPAVSAVIRERDGSKANGGFILTASHNPGGPE 134 Query: 120 QDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIE-ANDVDINHIGT---KELANMTI 175 +DFGIKYN SG A E T+ I+ + I Y++ E DVD++ +G + + Sbjct: 135 EDFGIKYNYESGQPAPESITDKIYGNTLTIKEYKMAEDIPDVDLSAVGVTKFGGPEDFDV 194 Query: 176 SVIDPIENYVALMENIFDFDAIRKLLSF-GFRIDIDCMNAVTGPYAKEILERKLGAPTGS 234 VIDP+E+YV LM++IFDF+ I+KLLS F D M+ VTG YAK I +LGAP S Sbjct: 195 EVIDPVEDYVKLMKSIFDFELIKKLLSRPDFTFCFDAMHGVTGAYAKRIFVEELGAPESS 254 Query: 235 VRNFIPLEDFGGCHPDPNLIHAKDLYDRMMMH------DSADFGAACDGDGDRSMILGKG 288 + N +P EDFGG HPDPNL +AK+L RM + + +FGAA DGDGDR+MILGK Sbjct: 255 LLNCVPKEDFGGGHPDPNLTYAKELVKRMGLGKTSYGDEPPEFGAASDGDGDRNMILGKR 314 Query: 289 IFVNPSDSLAIMVANA-GLIPGYATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKF 347 FV PSDS+AI+ ANA IP ++ GL GVARSMPTSAALD VA+KLNL FE PTGWKF Sbjct: 315 FFVTPSDSVAIIAANAQEAIPYFSGGLKGVARSMPTSAALDVVAKKLNLPFFEVPTGWKF 374 Query: 348 FNNLLENGMITICGEESFGTGSNHSREKDGIWSILFWLNILAVR------GESLL---DI 398 F NL++ G ++ICGEESFGTGS+H REKDGIW++L WL+ILA + G L+ DI Sbjct: 375 FGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKDVLPGGKLVTVEDI 434 Query: 399 VHKHWATYGRNYYSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQK-----IKQAGD 453 V +HWATYGRN+YSRYDY + +E A M+ L++L+ S G K + A D Sbjct: 435 VREHWATYGRNFYSRYDYENVDSEAANKMMD----HLRDLVNKSKKGIKYGVYTLAFADD 490 Query: 454 FVYTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTENSTLRVYIDNYEPDSSKHLKNTQ 513 F YTD +G+VS KQGIR +F + SRII+R+SGT + +T+R+YI+ YE D SKH ++ Q Sbjct: 491 FEYTDPVDGSVSSKQGIRFLFTDGSRIIFRLSGTGSAGATIRLYIEQYEKDPSKHGRDAQ 550 Query: 514 EMLSDLVEVSQRISCLRHYIGHTNPSI 540 E L L++V+ ++S L+ + G + P++ Sbjct: 551 EALKPLIDVALKLSKLKEFTGRSKPTV 577 >gnl|CDD|181032 PRK07564, PRK07564, phosphoglucomutase; Validated. Length = 543 Score = 667 bits (1725), Expect = 0.0 Identities = 197/547 (36%), Positives = 284/547 (51%), Gaps = 57/547 (10%) Query: 1 MLCTIVPTVPYQDQKPGTSGLRKKVSVFQQNSYTENFIQAIFNNVDCAEK------TLVV 54 PT P+QD K GTSG R Q S+ EN I AIF + L V Sbjct: 25 YTLKPDPTNPFQDVKFGTSGHRGSS---LQPSFNENHILAIFQAICEYRGKQGITGPLFV 81 Query: 55 GGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKYK-----ASGGIIL 109 GGD + IQ +++ AANG +I+G+GG TPAVSH I KY + GI++ Sbjct: 82 GGDTHALSEPAIQSALEVLAANGVGVVIVGRGGYTPTPAVSHAILKYNGRGGGLADGIVI 141 Query: 110 TASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKE 169 T SHNP +D GIKYN +GG A T+ I + ++ +Y + + ++ Sbjct: 142 TPSHNP---PEDGGIKYNPPNGGPADTDVTDAIEARANELLAYGLKGVKRIPLDRALAS- 197 Query: 170 LANMTISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILER--- 226 MT+ VIDP+ +YV +EN+FDFDAIRK G R+ +D + TGPY K I ER Sbjct: 198 ---MTVEVIDPVADYVEDLENVFDFDAIRK---AGLRLGVDPLGGATGPYWKAIAERYGL 251 Query: 227 ---KLGAPTGSVRNFIPLEDFGGCHPDPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSM 283 + AP NF+PL+D G D + +A + + + D+ D A D DGDR Sbjct: 252 DLTVVNAPVDPTFNFMPLDDDGKIRMDCSSPYA--MAGLLALKDAFDLAFANDPDGDRHG 309 Query: 284 ILGKGIFVNPSDSLAIMVANA-GLIPGYATGLVGVARSMPTSAALDRVAEKLNLKLFETP 342 I+ G +NP+ LA+ +A PG+ G GV +++ +SA +DRVA KL KL+E P Sbjct: 310 IVTPGGLMNPNHYLAVAIAYLFHHRPGWRAG-AGVGKTLVSSAMIDRVAAKLGRKLYEVP 368 Query: 343 TGWKFFNNLLENGMITICGEESFGT------GSNHSREKDGIWSILFWLNILAVRGESLL 396 G+K+F N L++G + GEES G GS + +KDG+ ++L ILAV G+S Sbjct: 369 VGFKWFVNGLDDGSLGFGGEESAGASFLRRDGSVWTTDKDGLIAVLLAAEILAVTGKSPS 428 Query: 397 DIVHKHWATYGRNYYSRYDYLGIPTEKAQDFMNDFRYRLKNLIG-SSFIGQKIKQAGDFV 455 +I + WA +GR YYSR+D P +KA R L+G + G I D Sbjct: 429 EIYRELWARFGRPYYSRHDAPATPEQKA-----ALRKLSPELVGATELAGDPI----DAS 479 Query: 456 YTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTENSTLRVYIDNYEPDSSKH--LKNTQ 513 T++ GN + G++VV +N R SGT+T T ++Y +++E D H K Q Sbjct: 480 LTEA-PGNGAAIGGLKVVTENG-WFAARPSGTET---TYKIYAESFEGDEHLHQIQKEAQ 534 Query: 514 EMLSDLV 520 E+++DL+ Sbjct: 535 EIVADLI 541 >gnl|CDD|130202 TIGR01132, pgm, phosphoglucomutase, alpha-D-glucose phosphate-specific. This enzyme interconverts alpha-D-glucose-1-P and alpha-D-glucose-6-P. Length = 543 Score = 126 bits (319), Expect = 1e-29 Identities = 135/481 (28%), Positives = 210/481 (43%), Gaps = 68/481 (14%) Query: 69 IIKIAAANGFARIIIGKGGILSTPAVSHLIRKYKASG-----GIILTASHNPAGATQDFG 123 ++++ AANG I+ G TPAVSH I + G GI++T SHNP +D G Sbjct: 97 VLEVLAANGVEVIVQENNGFTPTPAVSHAILTHNKKGEPLADGIVITPSHNPP---EDGG 153 Query: 124 IKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIEN 183 IKYN +GG A + T+ I + + + + + + + + LA+ T+ D ++ Sbjct: 154 IKYNPPNGGPADTEATQAIEDRANALLANGLKGVKRLPLA----QALASGTVKAHDLVQP 209 Query: 184 YVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILER-----KLGAP-TGSVRN 237 YV + +I D AI+K G R+ +D + Y K I E+ L P Sbjct: 210 YVDGLADIVDMAAIQKA---GLRLGVDPLGGSGIDYWKRIAEKYNLNLTLVNPQVDPTFR 266 Query: 238 FIPLEDFGGCHPD-------PNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMILGKGIF 290 F+ L+ G D L+ +D Y D D D DR I+ Sbjct: 267 FMTLDKDGKIRMDCSSPYAMAGLLALRDKY---------DLAFGNDPDYDRHGIVTPAGL 317 Query: 291 VNPSDSLAIMVANAGLI---PGYATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKF 347 +NP+ LA VA L P + G V V +++ +SA +DRV L +L E P G+K+ Sbjct: 318 MNPNHYLA--VAINYLFQHRPQWG-GDVAVGKTLVSSAMIDRVVADLGRQLVEVPVGFKW 374 Query: 348 FNNLLENGMITICGEESFGT------GSNHSREKDGIWSILFWLNILAVRGESLLDIVHK 401 F + L +G GEES G G+ S +KDGI L I AV G++ ++ Sbjct: 375 FVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQQHYNE 434 Query: 402 HWATYGRNYYSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTN 461 A +G Y+R +KA RLK L + AGD + T Sbjct: 435 LAAKFGAPSYNRIQAPATSAQKA---------RLKKLSPEMVSATTL--AGDPITARLTA 483 Query: 462 --GNVSDKQGIRVVFDNHSRIIYRISGTDTENSTLRVYIDNYEPDSSKHLKNTQEMLSDL 519 GN + G++V DN R SGT+ ++Y ++++ +HLK ++ ++ Sbjct: 484 APGNGAAIGGLKVTTDN-GWFAARPSGTE---DVYKIYCESFK--GEEHLKQIEKEAVEI 537 Query: 520 V 520 V Sbjct: 538 V 538 >gnl|CDD|184616 PRK14316, glmM, phosphoglucosamine mutase; Provisional. Length = 448 Score = 83.0 bits (206), Expect = 2e-16 Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 48/207 (23%) Query: 87 GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEES 146 G++ TP V++L R A G++++ASHNP +D GIK+ S G S++Q ++I Sbjct: 75 GVIPTPGVAYLTRALGADAGVMISASHNPV---EDNGIKFFGSDGFKLSDEQEDEI---- 127 Query: 147 KKITSYQIIEANDVDINH-----IGTKELANMTISVIDPIENYVALMENIFDFDAIRKLL 201 +++A + + +GT + + Y+ +++ D D L Sbjct: 128 -----EALLDAEEDTLPRPSGEGLGTV------SDYPEGLRKYLQFLKSTIDED-----L 171 Query: 202 SFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLI------- 254 S G ++ +DC N T A + LGA + + G PD I Sbjct: 172 S-GLKVALDCANGATSSLAPRLF-ADLGA------DVTVI----GTSPDGLNINDGVGST 219 Query: 255 HAKDLYDRMMMHDSADFGAACDGDGDR 281 H + L + ++ AD G A DGD DR Sbjct: 220 HPEALQELVVEKG-ADLGLAFDGDADR 245 >gnl|CDD|130522 TIGR01455, glmM, phosphoglucosamine mutase. This model describes GlmM, phosphoglucosamine mutase, also designated in MrsA and YhbF E. coli, UreC in Helicobacter pylori, and femR315 or FemD in Staphlococcus aureus. It converts glucosamine-6-phosphate to glucosamine-1-phosphate as part of the pathway toward UDP-N-acetylglucosamine for peptidoglycan and lipopolysaccharides. Length = 443 Score = 80.9 bits (200), Expect = 7e-16 Identities = 88/328 (26%), Positives = 134/328 (40%), Gaps = 58/328 (17%) Query: 87 GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGS---ASEQQTEDIF 143 G L TPAV++L R +A G++++ASHNP +D GIK+ G A+E E + Sbjct: 73 GPLPTPAVAYLTRTLRADAGVMISASHNPY---EDNGIKFFGPGGFKLDDATEAAIEALL 129 Query: 144 EESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSF 203 +E+ + + +G D + Y+ F + + L+ Sbjct: 130 DEADPLPR--------PESEGLGR------VKRYPDAVGRYIE-----FLKSTLPRGLTL 170 Query: 204 -GFRIDIDCMNAVTGPYAKEILERKLGA--------PTGSVRNFIPLEDFGGCHPDPNLI 254 G ++ +DC N A + R+LGA P G N + G H D Sbjct: 171 SGLKVVLDCANGAAYKVAPHVF-RELGAEVIAIGVEPDGLNIN----DGCGSTHLDA--- 222 Query: 255 HAKDLYDRMMMHDSADFGAACDGDGDRSMIL-GKGIFVNPSDSLAIMVANAGLIPGYATG 313 L + H AD G A DGD DR + + G V+ D + ++A A G G Sbjct: 223 ----LQKAVREHG-ADLGIAFDGDADRVLAVDANGRIVD-GDQILYIIARALKESGELAG 276 Query: 314 LVGVARSMPTSAALDRVAEKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTG----S 369 VA M ++ L+R EKL L L T G ++ + + GE+S G Sbjct: 277 NTVVATVM-SNLGLERALEKLGLTLIRTAVGDRYVLEEMRESGYNLGGEQS---GHIILL 332 Query: 370 NHSREKDGIWSILFWLNILAVRGESLLD 397 ++S DGI S L L I+ + S L Sbjct: 333 DYSTTGDGIVSALQVLTIM-KKSGSTLS 359 >gnl|CDD|184614 PRK14314, glmM, phosphoglucosamine mutase; Provisional. Length = 450 Score = 75.0 bits (185), Expect = 4e-14 Identities = 84/329 (25%), Positives = 135/329 (41%), Gaps = 56/329 (17%) Query: 87 GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSG---GSASEQQTEDIF 143 G L TP ++ + R +A G++++ASHNP QD GIK+ +S G E + E + Sbjct: 77 GPLPTPGIAFITRSMRADAGVVISASHNPY---QDNGIKFFSSDGFKLPDEVELRIEAMV 133 Query: 144 EESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSF 203 SK + +A+ V + D Y+ ++ F + L Sbjct: 134 -LSKDFDW-LLPDAHAVGKAK-----------RIDDAPGRYIVFLKATFP----KGLTLK 176 Query: 204 GFRIDIDCMNAVTGPYAKEILERKLGA--------PTGSVRNFIPLEDFGGCHPDPNLIH 255 G +I +DC N A + E +LGA P G N G HP+ Sbjct: 177 GLKIVLDCANGAAYKVAPAVFE-ELGAEVICIGVEPNGLNIN----AGCGSLHPE----- 226 Query: 256 AKDLYDRMMMHDSADFGAACDGDGDRS-MILGKGIFVNPSDSLAIMVANAGLIPGYATGL 314 + ++ H AD G A DGD DR ++ KG V+ D + + A G Sbjct: 227 --VIAKAVIEH-GADLGIALDGDADRLIVVDEKGHIVD-GDQIMAICATDLKKRGALPKN 282 Query: 315 VGVARSMPTSAALDRVAEKLNLKLFETPTGWKF-FNNLLENGMITICGEES----FGTGS 369 VA M ++ L+ ++L ++ TP G ++ + G + GE+S F Sbjct: 283 TLVATVM-SNMGLEVAMKELGGQVLRTPVGDRYVVEEMRRGGAN-LGGEQSGHLIF---L 337 Query: 370 NHSREKDGIWSILFWLNILAVRGESLLDI 398 +H+ DGI S L L I+ G+ L ++ Sbjct: 338 DHNTTGDGILSALQVLRIMIESGKPLSEL 366 >gnl|CDD|184620 PRK14323, glmM, phosphoglucosamine mutase; Provisional. Length = 440 Score = 72.5 bits (178), Expect = 2e-13 Identities = 80/329 (24%), Positives = 131/329 (39%), Gaps = 72/329 (21%) Query: 87 GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGS---ASEQQTEDIF 143 G+L TP VS+L R A+ G++++ASHNP QD GIK+ + G A+E + E + Sbjct: 77 GVLPTPGVSYLTRHLGATAGVVISASHNP---YQDNGIKFFGADGEKLPDAAELEIEALL 133 Query: 144 EESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSF 203 +E ELA +T + I + ++ DF LLS Sbjct: 134 DE---------------------VPELAEVTGAGIGSVSDFTEAERLYLDF-----LLSH 167 Query: 204 -----GFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLED-------FGGCHPDP 251 G ++ +DC N A ++ + GA V D G HP Sbjct: 168 APDLSGLKVALDCANGAAYRLAPKVF-QAAGA---DVFALFNTPDGRNINRGCGSTHP-- 221 Query: 252 NLIHAKDLYDRMMMHDSADFGAACDGDGDRSMILG-KGIFVNPSDSLAIMVANAGLIPGY 310 + R ++ D G A DGD DR++ + +G + L + NA Sbjct: 222 ------EALQRFVVEGGLDLGVAFDGDADRALFVDRRGRLFHGDHMLYL---NA-----L 267 Query: 311 ATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTGS- 369 A G V ++ ++ AL+ + + T G ++ + L +T+ GE+S G Sbjct: 268 ARGEKAVVGTVMSNMALEVKLREAGIAFHRTAVGDRYVHEKLHAKGLTLGGEQS---GHV 324 Query: 370 ---NHSREKDGIWSILFWLNILAVRGESL 395 +H+ DG+ + L L + G L Sbjct: 325 LFLDHAPTGDGVLTALLTLAAMKALGTDL 353 >gnl|CDD|185482 PTZ00150, PTZ00150, phosphoglucomutase-2-like protein; Provisional. Length = 584 Score = 68.2 bits (167), Expect = 5e-12 Identities = 122/546 (22%), Positives = 206/546 (37%), Gaps = 129/546 (23%) Query: 17 GTSGLRKK----------VSVFQQNSYTENFIQAIFNNVDCAEKTLVVGGDGRFYNHIVI 66 GT+GLR K ++V Q ++ F + +V+G DGR+++ Sbjct: 48 GTAGLRGKMGAGFNCMNDLTVQQTAQGLCAYVIETFGQ-ALKSRGVVIGYDGRYHSRRFA 106 Query: 67 QKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKY 126 + + + GF + G+ + TP V + +RK K G+++TASHNP +D G K Sbjct: 107 EITASVFLSKGFKVYLFGQ--TVPTPFVPYAVRKLKCLAGVMVTASHNP---KEDNGYKV 161 Query: 127 NTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELANMT-----------I 175 S+G QII +D +I+ K L+N+ Sbjct: 162 YWSNGA--------------------QIIPPHDKNIS---AKILSNLEPWSSSWEYLTET 198 Query: 176 SVIDPI----ENYVALMENIFDFDAIR--KLLSFGFRIDIDCMNAVTGPYAKEILERKLG 229 V DP+ + Y A +++ ++ K+ +I M+ V + ++ L +G Sbjct: 199 LVEDPLAEVSDAYFATLKSEYNPACCDRSKV-----KIVYTAMHGVGTRFVQKALH-TVG 252 Query: 230 APTGSVRNFIPLEDFGGCHPD--------PNLIHAKDLYDRMMMHDSADFGA----ACDG 277 P N + + PD PN K + M + G+ A D Sbjct: 253 LP-----NLLSVAQ--QAEPDPEFPTVTFPNPEEGKGALK-LSMETAEAHGSTVVLANDP 304 Query: 278 DGDRSMI---LGKGIFVNPSDSLAIMVA------NAGLIPGYATGLVGVARSMPTSAALD 328 D DR + L G + + L ++A G ++ +S L Sbjct: 305 DADRLAVAEKLNNGWKIFTGNELGALLAWWAMKRYRRQ--GIDKSKCFFICTVVSSRMLK 362 Query: 329 RVAEKLNLKLFETPTGWKFFNNLL-----ENGMITI-CGEESFGTG-SNHSREKDGIWSI 381 ++AEK + ET TG+K+ N ENG+ T+ EE+ G R+KDG+ + Sbjct: 363 KMAEKEGFQYDETLTGFKWIGNKAIELNAENGLTTLFAYEEAIGFMLGTRVRDKDGVTAA 422 Query: 382 LFWLNI---LAVRGESLLDIVHKHWATYG----RN-YYSRYDYLGIPTEKA---QDFMND 430 + L RG++L++ + + YG N YY YD P+ D N+ Sbjct: 423 AVVAEMALYLYERGKTLVEHLESLYKQYGYHFTNNSYYICYD----PSRIVSIFNDIRNN 478 Query: 431 FRYRLKNLIGSSFIGQKIKQAGDF-VYTDSTN-------GNVSDKQGIRVVFDNHSRIIY 482 Y + G + + D D+ + Q I F+N + I Sbjct: 479 GSYP------TKLGGYPVTRIRDLTTGYDTATPDGKPLLPVSASTQMITFYFENGAIITI 532 Query: 483 RISGTD 488 R SGT+ Sbjct: 533 RGSGTE 538 >gnl|CDD|184621 PRK14324, glmM, phosphoglucosamine mutase; Provisional. Length = 446 Score = 62.7 bits (153), Expect = 2e-10 Identities = 98/377 (25%), Positives = 160/377 (42%), Gaps = 83/377 (22%) Query: 28 FQQNSYTENFIQAIFNNVDCAEKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGG 87 F+++S T ++VG D R +++ ++ + G+ I IG Sbjct: 33 FKKHSITNK---------------ILVGKDTRRSGYMIENALVSGLTSVGYNVIQIGP-- 75 Query: 88 ILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSG---GSASEQQTEDIFE 144 + TPA++ L + GI+++ASHNP D GIK+ S G E++ E+IF Sbjct: 76 -MPTPAIAFLTEDMRCDAGIMISASHNP---YYDNGIKFFDSYGNKLDEEEEKEIEEIFF 131 Query: 145 ESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSF- 203 + + +I+++ IG+ + + D I Y+ ++N F K L+ Sbjct: 132 DEE------LIQSSQKTGEEIGSAK------RIDDVIGRYIVHIKNSFP-----KDLTLK 174 Query: 204 GFRIDIDCMNAVTGPYAKEILERKLGA--------PTGSVRNFIPLEDFGGCHPDPNLIH 255 G RI +D N A + +LGA P G N E+ G HP+ Sbjct: 175 GLRIVLDTANGAAYKVAPTVFS-ELGADVIVINDEPNGFNIN----ENCGALHPENLAQE 229 Query: 256 AKDLYDRMMMHDSADFGAACDGDGDRSMILG-KGIFVNPSDS----LAIMVANAGLIPGY 310 K AD G A DGD DR +++ KG V+ D LA+ + G + Sbjct: 230 VKRY--------RADIGFAFDGDADRLVVVDEKGEIVH-GDKLLGVLAVYLKEKGALKSQ 280 Query: 311 ATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKF-FNNLLENGMITICGEES----F 365 A VA M ++ AL+ +K ++L G K+ + ENG I GE+S F Sbjct: 281 AI----VATVM-SNLALEEYLKKHGIELKRCNVGDKYVLECMKENG-INFGGEQSGHIIF 334 Query: 366 GTGSNHSREKDGIWSIL 382 S++++ DG+ S L Sbjct: 335 ---SDYAKTGDGLVSAL 348 >gnl|CDD|172796 PRK14320, glmM, phosphoglucosamine mutase; Provisional. Length = 443 Score = 58.9 bits (142), Expect = 3e-09 Identities = 76/317 (23%), Positives = 129/317 (40%), Gaps = 60/317 (18%) Query: 17 GTSGLRKKVSVFQQNSYTENFIQAIFN------NVDCAEKTLVVGGDGRFYNHIVIQKII 70 GT G+R +V+ ++ T F Q + N N K ++VG D R + Sbjct: 6 GTDGIRGEVA---NSTITVEFTQKLGNAVGSLINQKNYPKFVIVGQDTRSSG-----GFL 57 Query: 71 KIAAANGF--ARIIIGKGGILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNT 128 K A +G A I + G++ TP V+ + K++A+ G ++TASHN D GIK + Sbjct: 58 KFALVSGLNAAGIDVLDLGVVPTPVVAFMTVKHRAAAGFVITASHN---KFTDNGIKLFS 114 Query: 129 SSG---GSASEQQTED------IFEESKKITSYQIIEANDVDINHIGTKELANMTISVID 179 S+G A E++ ED I++ K SY+I+ + Sbjct: 115 SNGFKLDDALEEEVEDMIDGDFIYQPQFKFGSYKILA----------------------N 152 Query: 180 PIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFI 239 I+ Y+ E+I A K +++ ++ +DC + + +L++ N Sbjct: 153 AIDEYI---ESIHSRFA--KFVNYKGKVVVDCAHGAASHNFEALLDKFGINYVSIASNPD 207 Query: 240 PLEDFGGCHPDPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMILGKGIFVNPSDSLAI 299 L GC + + AD G + DGD DR +I+ + D + Sbjct: 208 GLNINVGCGAT-----CVSNIKKAVKEQKADLGISLDGDADRIIIVDENGQEIDGDGILN 262 Query: 300 MVANAGLIPGYATGLVG 316 ++A I G G+VG Sbjct: 263 ILAQYSDICGGTNGIVG 279 >gnl|CDD|184617 PRK14317, glmM, phosphoglucosamine mutase; Provisional. Length = 465 Score = 56.9 bits (138), Expect = 1e-08 Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 49/219 (22%) Query: 87 GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSAS-EQQTEDIFEE 145 G+ TPAV++L RK +A GG++++ASHNP +D GIK+ + G S E Q Sbjct: 90 GLCPTPAVAYLTRKSEAIGGLMISASHNPP---EDNGIKFFGADGTKLSPELQ------- 139 Query: 146 SKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDF--DAIRKLLSF 203 IEA + + ++ S + L+++ D +++ ++ Sbjct: 140 -------AQIEA------GLRGELSSSDNASNWGRHYHRPELLDDYRDALLESLPDRVNL 186 Query: 204 -GFRIDID-CMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLI------- 254 G +I +D A + + + LGA I L D PD + I Sbjct: 187 QGVKIVLDLAWGAAVACAPE--VFKALGA------EVICLHD----QPDGDRINVNCGST 234 Query: 255 HAKDLYDRMMMHDSADFGAACDGDGDRSM-ILGKGIFVN 292 H + L ++ H AD G A DGD DR + + G+G V+ Sbjct: 235 HLEPLQAAVLEHG-ADMGFAFDGDADRVLAVDGQGRVVD 272 >gnl|CDD|182812 PRK10887, glmM, phosphoglucosamine mutase; Provisional. Length = 443 Score = 57.1 bits (139), Expect = 1e-08 Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 48/230 (20%) Query: 87 GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEES 146 G + TPAV++L R +A GI+++ASHNP D GIK+ ++ G D E + Sbjct: 74 GPMPTPAVAYLTRTLRAEAGIVISASHNP---YYDNGIKFFSADGTKLP-----DEVELA 125 Query: 147 KKITSYQIIEAN-DVDINHIGTKEL--ANMTISVIDPIENYVALMENIFDFDAIRKLLSF 203 IEA D + + + EL A+ + D Y+ ++ F + LS Sbjct: 126 --------IEAELDKPLTCVESAELGKAS---RINDAAGRYIEFCKSTFPNE-----LSL 169 Query: 204 -GFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLI-------H 255 G +I +DC N T A + R+LGA I + GC P+ I Sbjct: 170 RGLKIVVDCANGATYHIAPNVF-RELGA------EVIAI----GCEPNGLNINDECGATD 218 Query: 256 AKDLYDRMMMHDSADFGAACDGDGDR-SMILGKGIFVNPSDSLAIMVANA 304 + L ++ AD G A DGDGDR M+ G V+ L I+ + Sbjct: 219 PEALQAAVLAE-KADLGIAFDGDGDRVIMVDHLGNLVDGDQLLYIIARDR 267 >gnl|CDD|172797 PRK14321, glmM, phosphoglucosamine mutase; Provisional. Length = 449 Score = 52.9 bits (127), Expect = 2e-07 Identities = 77/280 (27%), Positives = 110/280 (39%), Gaps = 72/280 (25%) Query: 49 EKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKYKASGGII 108 +VVG D R + ++ +I + G I IG + TP I+ Y A G+ Sbjct: 36 GGKVVVGKDTRTSSEMLKNALISGLLSTGVDVIDIG---LAPTPLTGFAIKLYNADAGVT 92 Query: 109 LTASHNPAGATQDFGIKYNTSSG---GSASEQQTEDIFEESKKITSYQIIEANDVDINHI 165 +TASHNP + GIK +G E + E I E V N I Sbjct: 93 ITASHNPP---EYNGIKVWQRNGMAYTPEMENELERIIESGN---------FKRVPWNEI 140 Query: 166 GTKELANMTISVIDPIENYV-ALMENIFDFDAIRKLLSFGFRIDIDCMN---AVTGPYAK 221 GT A DP E Y+ A +E I L + + +D N ++ PY Sbjct: 141 GTLRRA-------DPKEEYIKAALEMIK--------LENSYTVVVDSGNGAGSILSPY-- 183 Query: 222 EILERKLGAPTGSVRNFIPLEDFGGCHP--------DPNLIHAKDL--YDRMMMHDSADF 271 L+R+LG S+ + HP +PN AK L + + AD Sbjct: 184 --LQRELGNKVISLNS----------HPSGFFVRELEPN---AKSLSMLAKTVKVLKADV 228 Query: 272 GAACDGDGDR-SMILGKGIFVNPSDSLAIMVANAGLIPGY 310 G A DGD DR ++ +G FV +M++ LI GY Sbjct: 229 GIAHDGDADRIGVVDDQGNFVE----YEVMLS---LIAGY 261 >gnl|CDD|184618 PRK14318, glmM, phosphoglucosamine mutase; Provisional. Length = 448 Score = 49.2 bits (118), Expect = 3e-06 Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%) Query: 87 GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEE 145 G+L TPAV++L A G++++ASHNP D GIK+ ++GG ED E Sbjct: 79 GVLPTPAVAYLTAALDADFGVMISASHNPM---PDNGIKF-FAAGGHKLPDDVEDRIEA 133 >gnl|CDD|185312 PRK15414, PRK15414, phosphomannomutase CpsG; Provisional. Length = 456 Score = 46.9 bits (111), Expect = 2e-05 Identities = 65/248 (26%), Positives = 103/248 (41%), Gaps = 31/248 (12%) Query: 50 KTLVVGGDGRFYNHIVIQKIIKIAAANGF--ARIIIGKGGILSTPAVSHLIRKYKASGGI 107 KT+V+GGD R + + +K+A A G A + + G+ T + GGI Sbjct: 39 KTIVLGGDVR-----LTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGI 93 Query: 108 ILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGT 167 +TASHNP + YN G + I ++ ++ EAND Sbjct: 94 EVTASHNP--------MDYN---GMKLVREGARPISGDTGLRDVQRLAEANDFPP----V 138 Query: 168 KELANMTISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILER- 226 E I+ + YV +++F + ++ L ++ I+ N GP I R Sbjct: 139 DETKRGRYQQINLRDAYV---DHLFGYINVKNLTPL--KLVINSGNGAAGPVVDAIEARF 193 Query: 227 -KLGAPTGSVR-NFIPLEDFGGCHPDPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMI 284 LGAP ++ + P +F P+P L +D ++ AD G A DGD DR + Sbjct: 194 KALGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFL 253 Query: 285 LG-KGIFV 291 KG F+ Sbjct: 254 FDEKGQFI 261 >gnl|CDD|184615 PRK14315, glmM, phosphoglucosamine mutase; Provisional. Length = 448 Score = 46.1 bits (110), Expect = 2e-05 Identities = 74/273 (27%), Positives = 107/273 (39%), Gaps = 54/273 (19%) Query: 87 GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSAS---EQQTEDIF 143 G + TPAV+ L R +A G++++ASHNP +D GIK G S E + E + Sbjct: 77 GPIPTPAVAMLTRSMRADLGVMISASHNPF---EDNGIKLFGPDGFKLSDEIELEIEALL 133 Query: 144 EESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSF 203 + ++ IG + + D Y+ + R L Sbjct: 134 DGD--------LDKRLAAPADIGRAK------RIDDAHGRYIEFAKRTLP----RDLRLD 175 Query: 204 GFRIDIDCMNAVTGPYAKEILERKLGA--------PTGSVRNFIPLEDFGGCHPDPNLIH 255 G R+ +DC N A E L +LGA P G N E+ G HP+ + Sbjct: 176 GLRVVVDCANGAAYKVAPEAL-WELGAEVITIGVEPNGFNIN----EECGSTHPE--ALA 228 Query: 256 AKDLYDRMMMHDSADFGAACDGDGDRSMILG-KGIFVNPSDSLAIMV---ANAGLIPGYA 311 K R AD G A DGD DR +I+ KG V+ +A++ A G + G Sbjct: 229 KKVREVR------ADIGIALDGDADRVIIVDEKGHVVDGDQLMALIAESWAEDGRLRGGG 282 Query: 312 TGLVGVARSMPTSAALDRVAEKLNLKLFETPTG 344 VA M ++ L+R L L T G Sbjct: 283 I----VATVM-SNLGLERFLADRGLTLERTAVG 310 >gnl|CDD|184619 PRK14322, glmM, phosphoglucosamine mutase; Provisional. Length = 429 Score = 44.6 bits (105), Expect = 6e-05 Identities = 74/280 (26%), Positives = 115/280 (41%), Gaps = 36/280 (12%) Query: 87 GILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEES 146 GIL TPAV+ L R + S G++++ASHNP GIK GG + E EE Sbjct: 72 GILPTPAVALLTRITR-SFGVVISASHNPPEYN---GIK--VLKGGYKIPDEMEVEIEER 125 Query: 147 KKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYV-ALMENIFDFDAIRKLLSFGF 205 + + + + T S + + Y+ A++E D D +++S Sbjct: 126 IESGYFP-------------VRSVVGRTKSFREGRDMYIGAVLEMFRDLDLTGEMVS--- 169 Query: 206 RIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLIHAKDLYDRMMM 265 +D N T AKE+ E LGA V F +D + H + L + M Sbjct: 170 ---LDLANGATTTTAKEVFEF-LGA---KVEVFNDSQDGLLINQGCGATHPRFLAEEM-- 220 Query: 266 HDSADFGAACDGDGDRSMILGKGIFVNPSDSLAIMVANAGLIPGYATGLVGVARSMPTSA 325 + G DGDGDR + + + V D + ++A G V M T+ Sbjct: 221 -KNGKVGFTFDGDGDRVIAVDEERNVVNGDRIIGILAVGLKEEGRLNSDTVVGTVM-TNG 278 Query: 326 ALDRVAEKLNLKLFETPTGWKF-FNNLLENGMITICGEES 364 L+ ++ +KL T G K+ +LE+G + GE S Sbjct: 279 GLEDFLKERGIKLLRTKVGDKYVLEKMLESGA-NLGGERS 317 >gnl|CDD|177999 PLN02371, PLN02371, phosphoglucosamine mutase family protein. Length = 583 Score = 39.3 bits (92), Expect = 0.003 Identities = 62/237 (26%), Positives = 95/237 (40%), Gaps = 57/237 (24%) Query: 75 ANGFARIIIGKG------GILSTPAV--SHLIRKYKASGGIILTASHNPAGATQDFGIKY 126 A+ + G G+ +TPA+ S L + I++TASH P G+K+ Sbjct: 132 ADAVFAGLASAGLDVVDMGLATTPAMFMSTLTEREDYDAPIMITASHLPYNRN---GLKF 188 Query: 127 NTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELANMTISVIDPIENYVA 186 T GG +DI E + +I D + + A+ + +D + Y Sbjct: 189 FTKDGGLGKP-DIKDILERAARIY------KEWSDEGLLKSSSGASSVVCRVDFMSTYAK 241 Query: 187 LMENIFDFDAIRKLLSF---------GFRIDIDCMNAVTGPYAKEILERKLGAPT-GSVR 236 + DAI++ + GF+I +D N G +A+++LE LGA T GS+ Sbjct: 242 HLR-----DAIKEGVGHPTNYETPLEGFKIVVDAGNGAGGFFAEKVLE-PLGADTSGSLF 295 Query: 237 NFIPLEDFGGCHPD---PNLIHAKDLYDRMMM--------HDSADFGAACDGDGDRS 282 LE PD PN H + D+ M + AD G D D DRS Sbjct: 296 ----LE------PDGMFPN--HIPNPEDKAAMSATTQAVLANKADLGIIFDTDVDRS 340 >gnl|CDD|172795 PRK14319, glmM, phosphoglucosamine mutase; Provisional. Length = 430 Score = 37.5 bits (87), Expect = 0.009 Identities = 70/279 (25%), Positives = 110/279 (39%), Gaps = 57/279 (20%) Query: 17 GTSGLRKKVSVFQQNSYTENFIQAIFNNVDCAEKTLVVGGDGRFYNHIVIQKIIKIAAAN 76 GT G+R V+ F A+ N VD K + + D R ++ ++ + Sbjct: 5 GTDGIRGVVNEFLTPEIAFRLGNALGNMVD---KKIFIAKDTRASGDMLEAALVAGITSA 61 Query: 77 GFARIIIGKGGILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASE 136 G + + G+L TPA++ LI K + + G++++ASHNP G+K G + Sbjct: 62 G---ADVYRCGVLPTPALA-LITKLEDAAGVMISASHNPPEYN---GLKV-LMRGYKLPD 113 Query: 137 QQTEDIFEESKKI--TSYQIIEANDVDINHIGTKELANMTISVIDPIENYVALMENIFDF 194 + E I +E +I + Y N +G VID Y E F++ Sbjct: 114 EVEERIEKEMNEIHYSPY----------NEVG---------CVID----YKLAFEEYFNY 150 Query: 195 DAIRKLLSF----GFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRN----FIPLEDFGG 246 I++ G +I +D N T ILE GA V N F D G Sbjct: 151 --IKQQYEGLDLSGIKIVVDVANGATYELNPYILE-YFGAKVEVVNNTPDGFNINVDCGS 207 Query: 247 CHPDPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMIL 285 HP ++ +++ H DGDGDR + L Sbjct: 208 THP-------ENAKEKITNH---KIAILHDGDGDRCIFL 236 >gnl|CDD|181937 PRK09542, manB, phosphomannomutase/phosphoglucomutase; Reviewed. Length = 445 Score = 36.1 bits (84), Expect = 0.025 Identities = 65/259 (25%), Positives = 99/259 (38%), Gaps = 76/259 (29%) Query: 72 IAAANGFARIIIGKG------GILSTPAVSHLIRKYKASG-----GIILTASHNPAGATQ 120 +AAA FA + +G G+ ST + Y ASG G + TASHNPA Sbjct: 51 LAAA--FAEGVTAQGLDVVRIGLASTDQL------YFASGLLDCPGAMFTASHNPA---A 99 Query: 121 DFGIKYNTSSGGSASEQQT--EDIFEESKKITSYQIIEANDVDINHIGTKELANMTISVI 178 GIK +G Q T I ++ I + + T++ Sbjct: 100 YNGIKL-CRAGAKPVGQDTGLAAIRDDL---------------IAGVPAYDGPPGTVTER 143 Query: 179 DPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNF 238 D + +Y A + ++ D IR L ++ +D N + G +L Sbjct: 144 DVLADYAAFLRSLVDLSGIRPL-----KVAVDAGNGMGGHTVPAVLGG------------ 186 Query: 239 IPLE------DFGGCHP-------DP-NLIHAKDLYDRMMMHDSADFGAACDGDGDRSMI 284 +P+ + G P DP NL+ DL + AD G A DGD DR + Sbjct: 187 LPITLLPLYFELDGTFPNHEANPLDPANLV---DLQAFVRET-GADIGLAFDGDADRCFV 242 Query: 285 LG-KGIFVNPSDSLAIMVA 302 + +G V+PS A++ A Sbjct: 243 VDERGQPVSPSAVTALVAA 261 >gnl|CDD|178483 PLN02895, PLN02895, phosphoacetylglucosamine mutase. Length = 562 Score = 32.3 bits (74), Expect = 0.32 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Query: 106 GIILTASHNPAGATQDFGIKYNTSSGG 132 G+++TASHNP D G+K SGG Sbjct: 61 GLMITASHNPVS---DNGVKIVDPSGG 84 >gnl|CDD|164792 PHA00363, PHA00363, major capsid protein. Length = 557 Score = 31.4 bits (71), Expect = 0.65 Identities = 15/57 (26%), Positives = 23/57 (40%) Query: 407 GRNYYSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGN 463 G S +DY G+PT+ A +R NLI + + + Q V T + Sbjct: 123 GFAEGSIHDYFGLPTKVAGIRCVALWHRAYNLIWNQYYRDENLQESVAVQMGDTTSD 179 >gnl|CDD|185546 PTZ00302, PTZ00302, N-acetylglucosamine-phosphate mutase; Provisional. Length = 585 Score = 31.2 bits (71), Expect = 0.74 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 3/20 (15%) Query: 106 GIILTASHNPAGATQDFGIK 125 G+++TASHNP QD G+K Sbjct: 78 GVMITASHNPI---QDNGVK 94 >gnl|CDD|151838 pfam11398, DUF2813, Protein of unknown function (DUF2813). Some members in this family of proteins are annotated as YjbD however this cannot be confirmed. Currently there is no known function. Length = 183 Score = 30.8 bits (70), Expect = 1.1 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 3/29 (10%) Query: 475 DNHSRIIYRISGTDTEN---STLRVYIDN 500 D RI YR+SG E+ +T ++DN Sbjct: 23 DGLQRIYYRVSGELNEDGNVTTTYSFLDN 51 >gnl|CDD|178450 PLN02859, PLN02859, glutamine-tRNA ligase. Length = 788 Score = 30.5 bits (69), Expect = 1.1 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 221 KEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLIHAKDLYDRMMMHDSADFGAACDGDG 279 KEILE+ L A G V P E G H + HAK ++ DFG A + G Sbjct: 251 KEILEKHLKATGGKVYTRFPPEPNGYLH----IGHAKAMF--------VDFGLAKERGG 297 >gnl|CDD|150454 pfam09787, Golgin_A5, Golgin subfamily A member 5. Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1. Length = 508 Score = 29.8 bits (67), Expect = 1.9 Identities = 10/46 (21%), Positives = 21/46 (45%) Query: 490 ENSTLRVYIDNYEPDSSKHLKNTQEMLSDLVEVSQRISCLRHYIGH 535 ++ ++ + N LK T ++ E+++R + LRH H Sbjct: 164 LDAAVKRHDGNVITAVLIFLKRTLKLEILFQELAERQTALRHLSKH 209 >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional. Length = 252 Score = 28.8 bits (65), Expect = 3.7 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%) Query: 194 FDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGA 230 F IR+ G R+DI NA PY IL+ LGA Sbjct: 76 FAHIRE--RHG-RLDILVNNAAANPYFGHILDTDLGA 109 >gnl|CDD|184126 PRK13539, PRK13539, cytochrome c biogenesis protein CcmA; Provisional. Length = 207 Score = 28.3 bits (64), Expect = 5.1 Identities = 11/21 (52%), Positives = 15/21 (71%) Query: 97 LIRKYKASGGIILTASHNPAG 117 LIR + A GGI++ A+H P G Sbjct: 169 LIRAHLAQGGIVIAATHIPLG 189 >gnl|CDD|162037 TIGR00785, dass, anion transporter. Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. Length = 444 Score = 28.1 bits (63), Expect = 5.4 Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 5/57 (8%) Query: 297 LAIMVANA-GLI----PGYATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKFF 348 LAI VA G I P T L+ + L K L F PT W FF Sbjct: 14 LAIFVAAIVGWILEPLPLPVTALLAIPIIAVLLGVLSAFKFKNALSGFADPTIWLFF 70 >gnl|CDD|177308 PHA00743, PHA00743, helix-turn-helix protein. Length = 51 Score = 27.8 bits (62), Expect = 8.1 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%) Query: 197 IRKLLSFGFRIDIDCMNAVTGPYAKEILERKL 228 +R+LLS I ID +T Y KE +E+ + Sbjct: 8 VRELLSIIHEIKID---IITQSYDKEKIEKAI 36 >gnl|CDD|179098 PRK00724, PRK00724, formate dehydrogenase accessory protein; Reviewed. Length = 263 Score = 27.4 bits (62), Expect = 9.3 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Query: 317 VARSMPTSAALDRVAEKLNLKL 338 VA S PTS A+ +AE+L L L Sbjct: 226 VAVSAPTSLAV-ELAEELGLTL 246 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.319 0.137 0.403 Gapped Lambda K H 0.267 0.0701 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 9,025,072 Number of extensions: 606547 Number of successful extensions: 1239 Number of sequences better than 10.0: 1 Number of HSP's gapped: 1203 Number of HSP's successfully gapped: 40 Length of query: 542 Length of database: 5,994,473 Length adjustment: 98 Effective length of query: 444 Effective length of database: 3,876,889 Effective search space: 1721338716 Effective search space used: 1721338716 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 60 (26.9 bits)