HHsearch alignment for GI: 254781108 and conserved domain: cd01474

>cd01474 vWA_ATR ATR (Anthrax Toxin Receptor): Anthrax toxin is a key virulence factor for Bacillus anthracis, the causative agent of anthrax. ATR is the cellular receptor for the anthrax protective antigen and facilitates entry of the toxin into cells. The VWA domain in ATR contains the toxin binding site and mediates interaction with protective antigen. The binding is mediated by divalent cations that binds to the MIDAS motif. These proteins are a family of vertebrate ECM receptors expressed by endothelial cells.
Probab=99.78  E-value=5.6e-17  Score=120.23  Aligned_cols=178  Identities=19%  Similarity=0.255  Sum_probs=129.6

Q ss_pred             CCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             65431357505566666676663101233102301268876540310134322011255533341000245665541022
Q gi|254781108|r  146 LAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQ  225 (398)
Q Consensus       146 ~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  225 (398)
T Consensus         3 ~~~DivFllD~S~Sv~~~f--~~--------------------------------------------~~~Fv~~lv~~f~   36 (185)
T cd01474           3 GHFDLYFVLDKSGSVAANW--IE--------------------------------------------IYDFVEQLVDRFN   36 (185)
T ss_pred             CCEEEEEEEECCCCCCCCH--HH--------------------------------------------HHHHHHHHHHHCC
T ss_conf             8613899997899876576--99--------------------------------------------9999999998569


Q ss_pred             HCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHH---HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             0276877652134654126776543112356899999999---7357788874458899999996113466666566766
Q gi|254781108|r  226 KAIQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSR---LNKLNPYENTNTYPAMHHAYRELYNEKESSHNTIGST  302 (398)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~---I~~l~~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~  302 (398)
T Consensus        37 ----~~---~~rvgvv~fS~~~~~--~f~l~~~~~~~~~~~~~~~~~~~~G~T~tg~AL~~a~~~~f~~~~g~R------  101 (185)
T cd01474          37 ----SP---GLRFSFITFSTRATK--ILPLTDDSSAIIKGLEVLKKVTPSGQTYIHEGLENANEQIFNRNGGGR------  101 (185)
T ss_pred             ----CC---CEEEEEEEECCCCCE--EEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC------
T ss_conf             ----98---749999998698318--984578707889999998876158937899999999997503236998------


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEECC-HHHHHHHHH
Q ss_conf             6651699815887787777766314899999999789889999954797558999998519981899469-899999999
Q gi|254781108|r  303 RLKKFVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPPEGQDLLRKCTDSSGQFFAVND-SRELLESFD  381 (398)
Q Consensus       303 ~~~k~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~~~~~~~l~~cAs~~~~yy~a~~-~~~L~~aF~  381 (398)
T Consensus       102 ~~~kvlivlTDG~s~~~~----~~~~~~~a~~lr~~gV~i~aVGV~--~~~~~eL~~IAs~p~~vf~v~~~F~~L~~i~~  175 (185)
T cd01474         102 ETVSVIIALTDGQLLLNG----HKYPEHEAKLSRKLGAIVYCVGVT--DFLKSQLINIADSKEYVFPVTSGFQALSGIIE  175 (185)
T ss_pred             CCCEEEEEEECCCCCCCC----CHHHHHHHHHHHHCCCEEEEEECC--CCCHHHHHHHHCCCCEEEECCCCHHHHHHHHH
T ss_conf             876289999326656762----141799999999789489999716--25999999871998648983475777899999


Q ss_pred             HHHHHHHHC
Q ss_conf             999987512
Q gi|254781108|r  382 KITDKIQEQ  390 (398)
Q Consensus       382 ~I~~~i~~~  390 (398)
T Consensus       176 ~l~~~iC~~  184 (185)
T cd01474         176 SVVKKACIE  184 (185)
T ss_pred             HHHHHHCCC
T ss_conf             999852879