HHsearch alignment for GI: 254781108 and conserved domain: cd01477

>cd01477 vWA_F09G8-8_type VWA F09G8.8 type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of mo
Probab=99.14  E-value=4.2e-09  Score=73.03  Aligned_cols=168  Identities=21%  Similarity=0.236  Sum_probs=111.1

Q ss_pred             CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             56543135750556666667666310123310230126887654031013432201125553334100024566554102
Q gi|254781108|r  145 NLAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSI  224 (398)
Q Consensus       145 ~~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  224 (398)
T Consensus        17 nLWLDVv~VVD~S~~mt~~gl~---------------------------------------------~V~~~I~s~f~~~   51 (193)
T cd01477          17 NLWLDIVFVVDNSKGMTQGGLW---------------------------------------------QVRATISSLFGSS   51 (193)
T ss_pred             HEEEEEEEEEECCCCCCCCCHH---------------------------------------------HHHHHHHHHHHCC
T ss_conf             2237899999678765621099---------------------------------------------9999999997135


Q ss_pred             HHCCCCCC-CCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHC-CC---CCCCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             20276877-652134654126776543112356899999999735-77---88874458899999996113466666566
Q gi|254781108|r  225 QKAIQEKK-NLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLNK-LN---PYENTNTYPAMHHAYRELYNEKESSHNTI  299 (398)
Q Consensus       225 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~~-l~---~~G~T~~~~gl~~a~~~l~~~~~~~~~~~  299 (398)
T Consensus        52 t~iGt~~~~pr~TRVGlVTYn~~AtvvAdLn~~~S~ddl~~~i~~~l~~vsss~~SyL~~GL~aA~~~l~~~~~-----~  126 (193)
T cd01477          52 SQIGTDYDDPRSTRVGLVTYNSNATVVADLNDLQSFDDLYSQIQGSLTDVSSTNASYLDTGLQAAEQMLAAGKR-----T  126 (193)
T ss_pred             CCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC-----C
T ss_conf             40357889987338999996787459863454565788999998875146666312799999999999983326-----6


Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCH--HHHHHHHHCCCCCEE
Q ss_conf             766665169981588778777776631489999999978988999995479755--899999851998189
Q gi|254781108|r  300 GSTRLKKFVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPPEG--QDLLRKCTDSSGQFF  368 (398)
Q Consensus       300 ~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~~~~--~~~l~~cAs~~~~yy  368 (398)
T Consensus       127 ~R~nykKVVIVyAs~y~~~g-----~~dp~pvA~rLK~~Gv~IiTVa~~q~~~~~~~~~L~~IAS-pg~nF  191 (193)
T cd01477         127 SRENYKKVVIVFASDYNDEG-----SNDPRPIAARLKSTGIAIITVAFTQDESSNLLDKLGKIAS-PGMNF  191 (193)
T ss_pred             CCCCCCEEEEEEECCCCCCC-----CCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCC-CCCCC
T ss_conf             42486279999950246789-----8886999999987697899998268875889998887579-98887