HHsearch alignment of GI: 254781108 and MMDB domain: 3ibs_A_

>3ibs_A (A:) Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for structural genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=99.62  E-value=5.4e-14  Score=101.98  Aligned_cols=180  Identities=17%  Similarity=0.288  Sum_probs=129.9

Q ss_pred             CCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf             45565431357505566666676663101233102301268876540310134322011255533341000245665541
Q gi|254781108|r  143 SENLAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVN  222 (398)
Q Consensus       143 ~~~~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  222 (398)
                      ....++++++|||.|+||......                                        ..|++..+.++..+..
T Consensus         7 ~~~~~~div~vlD~S~Sm~~~~~~----------------------------------------~~rl~~~k~~v~~l~~   46 (218)
T 3ibs_A            7 VKRKGVEVIIALDISNSXLAQDVQ----------------------------------------PSRLEKAKRLISRLVD   46 (218)
T ss_dssp             ---CCCEEEEEEECSGGGGCCSSS----------------------------------------SCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEEECCCCCCCCCCC----------------------------------------CCHHHHHHHHHHHHHH
T ss_conf             641794799999787476888778----------------------------------------3799999999999996


Q ss_pred             HHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHC----CCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             0220276877652134654126776543112356899999999735----778887445889999999611346666656
Q gi|254781108|r  223 SIQKAIQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLNK----LNPYENTNTYPAMHHAYRELYNEKESSHNT  298 (398)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~~----l~~~G~T~~~~gl~~a~~~l~~~~~~~~~~  298 (398)
                      ...         ..+.+.+.|.....  ...+++.+.......+..    +.++|+|+++.||.++.+.|...       
T Consensus        47 ~~~---------~~rv~iv~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~T~~~~aL~~a~~~l~~~-------  108 (218)
T 3ibs_A           47 ELD---------NDKVGXIVFAGDAF--TQLPITSDYISAKXFLESISPSLISKQGTAIGEAINLATRSFTPQ-------  108 (218)
T ss_dssp             TCS---------SCEEEEEEESSSEE--EEEEEESCHHHHHHHHHTCCGGGCCSCSCCHHHHHHHHHTTSCSC-------
T ss_pred             HCC---------CCEEEEEEECCCCC--CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHH-------
T ss_conf             489---------96589999898121--120354256677777876233666689945789999775330110-------


Q ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCC------------------------CHH
Q ss_conf             67666651699815887787777766314899999999789889999954797------------------------558
Q gi|254781108|r  299 IGSTRLKKFVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPP------------------------EGQ  354 (398)
Q Consensus       299 ~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~~------------------------~~~  354 (398)
                         +...+++|++|||..+..       ........+++.|+.+|+++++.+.                        .+.
T Consensus       109 ---~~~~~~~i~itDG~~~~~-------~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (218)
T 3ibs_A          109 ---EGVGRAIIVITDGENHEG-------GAVEAAKAAAEKGIQVSVLGVGXPEGAPIPVEGTNDYRRDREGNVIVTRLNE  178 (218)
T ss_dssp             ---SSCCEEEEEEECCTTCCS-------CHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCH
T ss_pred             ---HCCCCCEEEECCCCCCCC-------CCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf             ---045653499438987777-------5046667766406537653047765544320122220102467545454799


Q ss_pred             HHHHHHHC-CCCCEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf             99999851-9981899469899999999999987512
Q gi|254781108|r  355 DLLRKCTD-SSGQFFAVNDSRELLESFDKITDKIQEQ  390 (398)
Q Consensus       355 ~~l~~cAs-~~~~yy~a~~~~~L~~aF~~I~~~i~~~  390 (398)
                      ..|+..|. ..|.||.+.+.++|.+.|.+.-....+-
T Consensus       179 ~~l~~la~~~~g~~~~~~~~~~l~~~~~~~i~~~~~~  215 (218)
T 3ibs_A          179 GXCQEIAKDGKGIYVRVDNSNSAQKAISQEISKXAKS  215 (218)
T ss_dssp             HHHHHHHHHTEEEEEEECSSSHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCC
T ss_conf             9999999854908999518799999999999765043