HHsearch results for GI: 254781108 and protein with PDBid: 1n3y_A
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=99.69 E-value=1.5e-16 Score=116.37 Aligned_cols=183 Identities=17% Similarity=0.245 Sum_probs=128.9
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 55654313575055666666766631012331023012688765403101343220112555333410002456655410
Q gi|254781108|r 144 ENLAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNS 223 (398)
Q Consensus 144 ~~~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 223 (398)
...++|+++++|.|+||.... ....+..+..+++.
T Consensus 6 ~~~~~DivfvlD~S~Sm~~~~---------------------------------------------~~~~k~~i~~li~~ 40 (198)
T 1n3y_A 6 SRQEQDIVFLIDGSGSISSRN---------------------------------------------FATMMNFVRAVISQ 40 (198)
T ss_dssp --CCEEEEEEEECCTTSCHHH---------------------------------------------HHHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEECCCCCCHHH---------------------------------------------HHHHHHHHHHHHHH
T ss_conf 688864899996879988799---------------------------------------------99999999999997
Q ss_pred HHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCC--CCHHHHHHHHHCCC-CCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 220276877652134654126776543112356--89999999973577-888744588999999961134666665667
Q gi|254781108|r 224 IQKAIQEKKNLSVRIGTIAYNIGIVGNQCTPLS--NNLNEVKSRLNKLN-PYENTNTYPAMHHAYRELYNEKESSHNTIG 300 (398)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt--~~~~~~~~~I~~l~-~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~ 300 (398)
+. + ...|.+.+.|....... .+|+ .+...+...|+.+. .+|+|+++.++.++.+.++....+ .
T Consensus 41 l~-----~--~~~rv~vv~f~~~~~~~--~~l~~~~~~~~~~~~i~~~~~~~~~t~~~~al~~a~~~~~~~~~~-----~ 106 (198)
T 1n3y_A 41 FQ-----R--PSTQFSLMQFSNKFQTH--FTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYG-----A 106 (198)
T ss_dssp SC-----T--TTEEEEEEEESSSEEEE--ECHHHHHHCSSGGGGGTTCCCCCSCBCHHHHHHHHHTTTTSGGGT-----C
T ss_pred HC-----C--CCCEEEEEEEECCEEEE--CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC-----C
T ss_conf 08-----9--98589999983432341--266664338999998876540369873889999999998423205-----7
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCC---CCHHHHHHHHHCCC--CCEEEECCHHH
Q ss_conf 66665169981588778777776631489999999978988999995479---75589999985199--81899469899
Q gi|254781108|r 301 STRLKKFVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAP---PEGQDLLRKCTDSS--GQFFAVNDSRE 375 (398)
Q Consensus 301 ~~~~~k~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~---~~~~~~l~~cAs~~--~~yy~a~~~~~ 375 (398)
.+..+|++||+|||..+.. ......+++.+|+.||+||+||++.. ....+.|+.+|+.| .++|.+++.++
T Consensus 107 r~~~~kvivlltDG~~~~~-----~~~~~~~~~~~~~~gv~i~~Ig~g~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~ 181 (198)
T 1n3y_A 107 RRDAAKILIVITDGKKEGD-----SLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDA 181 (198)
T ss_dssp CTTSEEEEEEEESSCCBSC-----SSCHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGG
T ss_pred CCCCCCEEEEEECCCCCCC-----CCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHH
T ss_conf 7876425999935898887-----20599999999978988999997876677534999999866998651999299999
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 999999999987512
Q gi|254781108|r 376 LLESFDKITDKIQEQ 390 (398)
Q Consensus 376 L~~aF~~I~~~i~~~ 390 (398)
|.+++++|.++|..+
T Consensus 182 L~~i~~~l~~~ic~~ 196 (198)
T 1n3y_A 182 LKDIQNQLKEKIFAI 196 (198)
T ss_dssp GGGGHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCC
T ss_conf 999999999873167