HHsearch results for GI: 254781108 and protein with PDBid: 1rrk_A

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.79  E-value=2.5e-18  Score=127.08  Aligned_cols=185  Identities=20%  Similarity=0.233  Sum_probs=130.4

Q ss_pred             CCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf             43135750556666667666310123310230126887654031013432201125553334100024566554102202
Q gi|254781108|r  148 ISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQKA  227 (398)
Q Consensus       148 ~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  227 (398)
                      +|+++|||.|+||...                                             +.+..+.++..+++.+...
T Consensus         2 lDivfvlD~S~Sm~~~---------------------------------------------~~~~~k~~~~~~i~~~~~~   36 (497)
T 1rrk_A            2 MNIYLVLDGSDSIGAS---------------------------------------------NFTGAKKVLVNLIEKVASY   36 (497)
T ss_dssp             EEEEEEEECSTTTCHH---------------------------------------------HHHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEEECCCCCCHH---------------------------------------------HHHHHHHHHHHHHHHCCCC
T ss_conf             4589999577999869---------------------------------------------9999999999999853658


Q ss_pred             CCCCCCCCEEEEEEECCCCCCCCCCCCCC----CCHHHHHHHHHCCC-----CCCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             76877652134654126776543112356----89999999973577-----8887445889999999611346666656
Q gi|254781108|r  228 IQEKKNLSVRIGTIAYNIGIVGNQCTPLS----NNLNEVKSRLNKLN-----PYENTNTYPAMHHAYRELYNEKESSHNT  298 (398)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lt----~~~~~~~~~I~~l~-----~~G~T~~~~gl~~a~~~l~~~~~~~~~~  298 (398)
                      .     ...|.+.+.|+.....  ..+++    .++..++..|+.|.     .+|+|++..+|.++.+.+......... 
T Consensus        37 ~-----~~~rv~lv~f~~~~~~--~~~l~~~~~~~~~~~~~~i~~i~~~~~~~~g~T~~~~al~~a~~~~~~~~~~~~~-  108 (497)
T 1rrk_A           37 G-----VKPRYGLVTYATYPKI--WVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPE-  108 (497)
T ss_dssp             T-----CCCEEEEEEESSSEEE--EECTTSGGGGCHHHHHHHHHHCCGGGSCCTTCCCHHHHHHHHHHHHCCC-------
T ss_pred             C-----CCEEEEEEEECCEEEE--EECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC-
T ss_conf             9-----9609999998781789--9737987756899999999608566886888757999999999998652014755-


Q ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHH-------HHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCC---CEE
Q ss_conf             67666651699815887787777766314899-------99999978988999995479755899999851998---189
Q gi|254781108|r  299 IGSTRLKKFVIFITDGENSGASAYQNTLNTLQ-------ICEYMRNAGMKIYSVAVSAPPEGQDLLRKCTDSSG---QFF  368 (398)
Q Consensus       299 ~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~-------~c~~~K~~gi~IytIg~~~~~~~~~~l~~cAs~~~---~yy  368 (398)
                       .....+|+|||||||+.|.+...........       ....+|++||.||+||+|. ..+.+.|+.+|+.|+   |||
T Consensus       109 -~~~~~~~viillTDG~~n~~~~p~~~~~~i~~~~~~~~~~~~~~~~gi~i~~vgiG~-~~d~~~L~~iAs~~~~~~~~f  186 (497)
T 1rrk_A          109 -GWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGP-LVNQVNINALASKKDNEQHVC  186 (497)
T ss_dssp             -CGGGCEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSSCC-CCCGGGEEEEEEECSS-SCCHHHHHHHSCCCTTCCCEE
T ss_pred             -CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC-CCCHHHHHHHHCCCCCCEEEE
T ss_conf             -556787599999797677789878999999987877777766876790799973688-679999998751789850499


Q ss_pred             EECCHHHHHHHHHHHHHHH
Q ss_conf             9469899999999999987
Q gi|254781108|r  369 AVNDSRELLESFDKITDKI  387 (398)
Q Consensus       369 ~a~~~~~L~~aF~~I~~~i  387 (398)
                      .+++.++|.++|.++.++-
T Consensus       187 ~~~d~~~L~~~~~~~~~~~  205 (497)
T 1rrk_A          187 KVKDMECLEDVFYQMIDES  205 (497)
T ss_dssp             ETTCHHHHHHHHHHHSCGG
T ss_pred             EECCHHHHHHHHHHCCCCC
T ss_conf             9499999999875302466