HHsearch results for GI: 254781108 and protein with PDBid: 1rrk_A
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.79 E-value=2.5e-18 Score=127.08 Aligned_cols=185 Identities=20% Similarity=0.233 Sum_probs=130.4
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 43135750556666667666310123310230126887654031013432201125553334100024566554102202
Q gi|254781108|r 148 ISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQKA 227 (398)
Q Consensus 148 ~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 227 (398)
+|+++|||.|+||... +.+..+.++..+++.+...
T Consensus 2 lDivfvlD~S~Sm~~~---------------------------------------------~~~~~k~~~~~~i~~~~~~ 36 (497)
T 1rrk_A 2 MNIYLVLDGSDSIGAS---------------------------------------------NFTGAKKVLVNLIEKVASY 36 (497)
T ss_dssp EEEEEEEECSTTTCHH---------------------------------------------HHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCCCHH---------------------------------------------HHHHHHHHHHHHHHHCCCC
T ss_conf 4589999577999869---------------------------------------------9999999999999853658
Q ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCCC----CCHHHHHHHHHCCC-----CCCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 76877652134654126776543112356----89999999973577-----8887445889999999611346666656
Q gi|254781108|r 228 IQEKKNLSVRIGTIAYNIGIVGNQCTPLS----NNLNEVKSRLNKLN-----PYENTNTYPAMHHAYRELYNEKESSHNT 298 (398)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lt----~~~~~~~~~I~~l~-----~~G~T~~~~gl~~a~~~l~~~~~~~~~~ 298 (398)
. ...|.+.+.|+..... ..+++ .++..++..|+.|. .+|+|++..+|.++.+.+.........
T Consensus 37 ~-----~~~rv~lv~f~~~~~~--~~~l~~~~~~~~~~~~~~i~~i~~~~~~~~g~T~~~~al~~a~~~~~~~~~~~~~- 108 (497)
T 1rrk_A 37 G-----VKPRYGLVTYATYPKI--WVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPE- 108 (497)
T ss_dssp T-----CCCEEEEEEESSSEEE--EECTTSGGGGCHHHHHHHHHHCCGGGSCCTTCCCHHHHHHHHHHHHCCC-------
T ss_pred C-----CCEEEEEEEECCEEEE--EECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC-
T ss_conf 9-----9609999998781789--9737987756899999999608566886888757999999999998652014755-
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHH-------HHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCC---CEE
Q ss_conf 67666651699815887787777766314899-------99999978988999995479755899999851998---189
Q gi|254781108|r 299 IGSTRLKKFVIFITDGENSGASAYQNTLNTLQ-------ICEYMRNAGMKIYSVAVSAPPEGQDLLRKCTDSSG---QFF 368 (398)
Q Consensus 299 ~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~-------~c~~~K~~gi~IytIg~~~~~~~~~~l~~cAs~~~---~yy 368 (398)
.....+|+|||||||+.|.+........... ....+|++||.||+||+|. ..+.+.|+.+|+.|+ |||
T Consensus 109 -~~~~~~~viillTDG~~n~~~~p~~~~~~i~~~~~~~~~~~~~~~~gi~i~~vgiG~-~~d~~~L~~iAs~~~~~~~~f 186 (497)
T 1rrk_A 109 -GWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGP-LVNQVNINALASKKDNEQHVC 186 (497)
T ss_dssp -CGGGCEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSSCC-CCCGGGEEEEEEECSS-SCCHHHHHHHSCCCTTCCCEE
T ss_pred -CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC-CCCHHHHHHHHCCCCCCEEEE
T ss_conf -556787599999797677789878999999987877777766876790799973688-679999998751789850499
Q ss_pred EECCHHHHHHHHHHHHHHH
Q ss_conf 9469899999999999987
Q gi|254781108|r 369 AVNDSRELLESFDKITDKI 387 (398)
Q Consensus 369 ~a~~~~~L~~aF~~I~~~i 387 (398)
.+++.++|.++|.++.++-
T Consensus 187 ~~~d~~~L~~~~~~~~~~~ 205 (497)
T 1rrk_A 187 KVKDMECLEDVFYQMIDES 205 (497)
T ss_dssp ETTCHHHHHHHHHHHSCGG
T ss_pred EECCHHHHHHHHHHCCCCC
T ss_conf 9499999999875302466