HHsearch results for GI: 254781108 and protein with PDBid: 2x5n_A
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=99.60 E-value=6.6e-14 Score=100.54 Aligned_cols=154 Identities=10% Similarity=0.088 Sum_probs=112.6
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 43135750556666667666310123310230126887654031013432201125553334100024566554102202
Q gi|254781108|r 148 ISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQKA 227 (398)
Q Consensus 148 ~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 227 (398)
-.+++|+|.|+||.... ...+|+...+.++..+++.+...
T Consensus 3 ea~viviD~S~SM~~~D----------------------------------------~~p~Rl~~ak~a~~~li~~~~~~ 42 (192)
T 2x5n_A 3 EATMILIDNSEWMINGD----------------------------------------YIPTRFEAQKDTVHMIFNQKIND 42 (192)
T ss_dssp EEEEEEECCSGGGGCTT----------------------------------------SSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEECCHHHCCCC----------------------------------------CCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 79999998985543789----------------------------------------89789999999999999987645
Q ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf 76877652134654126776543112356899999999735778887445889999999611346666656676666516
Q gi|254781108|r 228 IQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLNKLNPYENTNTYPAMHHAYRELYNEKESSHNTIGSTRLKKF 307 (398)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~~l~~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~~~k~ 307 (398)
... .+.+.+.|..... ....+++.+...+...++.+.++|+|+++.|+..|++.|.... ....++.
T Consensus 43 ~~~-----~~vg~v~~~~~~~-~~~~~~~~~~~~~~~~i~~l~~~G~T~l~~al~~A~~~l~~~~--------~~~~~~~ 108 (192)
T 2x5n_A 43 NPE-----NMCGLMTIGDNSP-QVLSTLTRDYGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRE--------NKIQRQR 108 (192)
T ss_dssp CTT-----CEEEEEECCTTSC-CEEEEEESCHHHHHHHHTTCCCCSCCCHHHHHHHHHHHHHTCS--------CTTSEEE
T ss_pred CCC-----CEEEEEEECCCCC-CCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH--------HCCCCEE
T ss_conf 977-----7499986057643-0147884089999987402344687652279999999998621--------1046506
Q ss_pred EEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
Q ss_conf 998158877877777663148999999997898899999547975589999985
Q gi|254781108|r 308 VIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPPEGQDLLRKCT 361 (398)
Q Consensus 308 iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~~~~~~~l~~cA 361 (398)
|+|+|||..+.. ......+++.+|+.||+||+||||.+. +...|+.++
T Consensus 109 iil~tdg~~~~~-----~~~~~~~a~~~~~~~i~i~~Ig~G~~~-~~~~l~~~~ 156 (192)
T 2x5n_A 109 IVAFVGSPIVED-----EKNLIRLAKRMKKNNVAIDIIHIGELQ-NESALQHFI 156 (192)
T ss_dssp EEEEECSCCSSC-----HHHHHHHHHHHHHTTEEEEEEEESCC----CHHHHHH
T ss_pred EEEEECCCCCCC-----HHHHHHHHHHHCCCCCEEEEEEEECCC-CHHHHHHHH
T ss_conf 999968897530-----678999999851357507999971767-879999999