HHSEARCH alignment of GI: 254781108 and SCOP domain: d1shux_

Alignment
>d1shux_ c.62.1.1 (X:) Capillary morphogenesis protein 2 domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77  E-value=6.9e-18  Score=122.97  Aligned_cols=174  Identities=20%  Similarity=0.266  Sum_probs=128.2

Q ss_pred             CCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             65431357505566666676663101233102301268876540310134322011255533341000245665541022
Q gi|254781108|r  146 LAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQ  225 (398)
Q Consensus       146 ~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  225 (398)
                      .++|+++++|.|+||...+                                              ...+..+..++..+.
T Consensus         4 ~~~Div~llD~S~Sm~~~~----------------------------------------------~~~k~~~~~~~~~~~   37 (181)
T d1shux_           4 RAFDLYFVLDKSGSVANNW----------------------------------------------IEIYNFVQQLAERFV   37 (181)
T ss_dssp             SCEEEEEEEECSGGGGGGH----------------------------------------------HHHHHHHHHHHHHCC
T ss_pred             CCEEEEEEEECCCCCCCCH----------------------------------------------HHHHHHHHHHHHHHC
T ss_conf             8658999994788853379----------------------------------------------999999999999726


Q ss_pred             HCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH---CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             027687765213465412677654311235689999999973---57788874458899999996113466666566766
Q gi|254781108|r  226 KAIQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLN---KLNPYENTNTYPAMHHAYRELYNEKESSHNTIGST  302 (398)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~---~l~~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~  302 (398)
                      .       ...+.+.+.|+...  ....+++.+...+...++   .+.++|+|+++.||.++.+.+....        ..
T Consensus        38 ~-------~~~rvglv~fs~~~--~~~~~l~~~~~~~~~~l~~l~~~~~~g~t~~~~al~~~~~~~~~~~--------~~  100 (181)
T d1shux_          38 S-------PEMRLSFIVFSSQA--TIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAG--------GL  100 (181)
T ss_dssp             C-------TTEEEEEEEESSSE--EEEEEEECCHHHHHHHHHHHHTCCCCSCCCHHHHHHHHHHHHHHHT--------GG
T ss_pred             C-------CCCEEEEEEEECCE--EEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC--------CC
T ss_conf             8-------99789999960423--7999724888999997653222367785068999999998763003--------57


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEECC-HHHHHHHHH
Q ss_conf             6651699815887787777766314899999999789889999954797558999998519981899469-899999999
Q gi|254781108|r  303 RLKKFVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPPEGQDLLRKCTDSSGQFFAVND-SRELLESFD  381 (398)
Q Consensus       303 ~~~k~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~~~~~~~l~~cAs~~~~yy~a~~-~~~L~~aF~  381 (398)
                      +..|+|||+|||+.+...    .......+..+|+.||.||+||+| + .+...|+.+|++|++.|.+.+ .++|.+.++
T Consensus       101 ~~~~~ivliTDG~~~~~~----~~~~~~~~~~~k~~gv~v~~vgig-~-~~~~~L~~ia~~~~~~~~~~~~~~~L~~~~~  174 (181)
T d1shux_         101 KTSSIIIALTDGKLDGLV----PSYAEKEAKISRSLGASVYCVGVL-D-FEQAQLERIADSKEQVFPVKGGFQALKGIIN  174 (181)
T ss_dssp             GSCEEEEEEECCCCCTTH----HHHHHHHHHHHHHTTCEEEEEECS-S-CCHHHHHHHSSSGGGEEESSSTTHHHHHHHH
T ss_pred             CCCEEEEEECCCCCCCCC----CHHHHHHHHHHHHCCCEEEEEEEC-C-CCHHHHHHHHCCCCCEEEECCCHHHHHHHHH
T ss_conf             875289992478778886----389999999999789889999968-5-4899999984899965994599999999999


Q ss_pred             HHHHHHH
Q ss_conf             9999875
Q gi|254781108|r  382 KITDKIQ  388 (398)
Q Consensus       382 ~I~~~i~  388 (398)
                      +|.++|.
T Consensus       175 ~i~~~iC  181 (181)
T d1shux_         175 SILAQSC  181 (181)
T ss_dssp             HHHHTBC
T ss_pred             HHHHHHC
T ss_conf             9986339


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: vWA-like
superfamily: vWA-like
family: Integrin A (or I) domain
domain: Capillary morphogenesis protein 2 domain
species: Human (Homo sapiens) [TaxId: 9606]