HHsearch alignment for GI: 254781110 and conserved domain: cd01462

>cd01462 VWA_YIEM_type VWA YIEM type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if
Probab=99.18  E-value=1.8e-09  Score=80.22  Aligned_cols=144  Identities=17%  Similarity=0.200  Sum_probs=98.7

Q ss_pred             CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC-CCCC
Q ss_conf             201221022324223357876666753467665306788999899998510467876554302232048764312-4457
Q gi|254781110|r  192 LIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKN-IEPS  270 (420)
Q Consensus       192 ~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt  270 (420)
T Consensus         2 pvV~vlD~SGSM~--------------------G~~~~~ak~~~~~l~~~l~~~-----~~~~~lv~F~~~~~~~~~~~~   56 (152)
T cd01462           2 PVILLVDQSGSMY--------------------GAPEEVAKAVALALLRIALAE-----NRDTYLILFDSEFQTKIVDKT   56 (152)
T ss_pred             CEEEEEECCCCCC--------------------CCHHHHHHHHHHHHHHHHHHC-----CCEEEEEEECCCCEEEECCCC
T ss_conf             9999997999989--------------------806999999999999973233-----980999991687357715876


Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHH
Q ss_conf             78488999999864046788765388999999861310123345543347767787766624899606867777765348
Q gi|254781110|r  271 WGTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNVNT  350 (420)
Q Consensus       271 ~~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~~~  350 (420)
T Consensus        57 ~~~~~~~~~i---~~~~~~GGT~i~~aL~~A~~~l~~~------------------~~~~~~IvlITDG~~~~~~--~~~  113 (152)
T cd01462          57 DDLEEPVEFL---SGVQLGGGTDINKALRYALELIERR------------------DPRKADIVLITDGYEGGVS--DEL  113 (152)
T ss_pred             CCHHHHHHHH---HHCCCCCCCCHHHHHHHHHHHHHCC------------------CCCCCEEEEEECCCCCCCH--HHH
T ss_conf             4599999999---7253689865799999999987425------------------7656469998267567983--999


Q ss_pred             HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHC
Q ss_conf             9999999978987999995489778999998621
Q gi|254781110|r  351 IKICDKAKENFIKIVTISINASPNGQRLLKTCVS  384 (420)
Q Consensus       351 ~~~c~~~k~~gi~i~tIgf~~~~~~~~~l~~cas  384 (420)
T Consensus       114 ~~~~~~~~~~~~r~~~~~iG~~~~-p~~~~~~~~  146 (152)
T cd01462         114 LREVELKRSRVARFVALALGDHGN-PGYDRISAE  146 (152)
T ss_pred             HHHHHHHHHCCEEEEEEEECCCCC-CHHHHHHHH
T ss_conf             999999983891999999899988-278787666