HHsearch alignment for GI: 254781110 and conserved domain: cd01465

>cd01465 vWA_subgroup VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if n
Probab=99.82  E-value=1.2e-18  Score=139.93  Aligned_cols=166  Identities=19%  Similarity=0.210  Sum_probs=128.1

Q ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf             32012210223242233578766667534676653067889998999985104678765543022320487643124457
Q gi|254781110|r  191 FLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPS  270 (420)
Q Consensus       191 ~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt  270 (420)
T Consensus         1 ldiv~vlD~SGSM~--------------------g~~~~~~k~a~~~~l~~l~~------~dr~~iv~F~~~~~~~~~~~   54 (170)
T cd01465           1 LNLVFVIDRSGSMD--------------------GPKLPLVKSALKLLVDQLRP------DDRLAIVTYDGAAETVLPAT   54 (170)
T ss_pred             CCEEEEEECCCCCC--------------------CCHHHHHHHHHHHHHHHCCC------CCEEEEEEECCCCEECCCCC
T ss_conf             91999990886889--------------------71999999999999985898------78799998358615515878


Q ss_pred             CC--HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC-
Q ss_conf             78--488999999864046788765388999999861310123345543347767787766624899606867777765-
Q gi|254781110|r  271 WG--TEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSN-  347 (420)
Q Consensus       271 ~~--~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~-  347 (420)
T Consensus        55 ~~~~~~~~~~~i~---~l~~~G~T~~~~~l~~a~~~~~~~~----------------~~~~~~~iillTDG~~~~~~~~~  115 (170)
T cd01465          55 PVRDKAAILAAID---RLTAGGSTAGGAGIQLGYQEAQKHF----------------VPGGVNRILLATDGDFNVGETDP  115 (170)
T ss_pred             CHHHHHHHHHHHH---CCCCCCCCCHHHHHHHHHHHHHHCC----------------CCCCCEEEEEEECCCCCCCCCCH
T ss_conf             6667999999874---3898998527799999999998633----------------78875069998158856798898


Q ss_pred             CHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH-HHCCCCCEEEECCHHHHHHHH
Q ss_conf             3489999999978987999995489778999998-621898279817989999999
Q gi|254781110|r  348 VNTIKICDKAKENFIKIVTISINASPNGQRLLKT-CVSSPEYHYNVVNADSLIHVF  402 (420)
Q Consensus       348 ~~~~~~c~~~k~~gi~i~tIgf~~~~~~~~~l~~-cas~~~~yf~a~~~~~L~~aF  402 (420)
T Consensus       116 ~~~~~~~~~~~~~~i~i~tiGiG~~~~~~-~L~~iA~~~~G~~~~v~~~~~l~~~f  170 (170)
T cd01465         116 DELARLVAQKRESGITLSTLGFGDNYNED-LMEAIADAGNGNTAYIDNLAEARKVF  170 (170)
T ss_pred             HHHHHHHHHHHHCCCCCEEEEECCCCCHH-HHHHHHHCCCCEEEECCCHHHHHHHC
T ss_conf             99999999987438862489808879999-99999975798899849999999639