HHsearch alignment for GI: 254781110 and conserved domain: cd01467

>cd01467 vWA_BatA_type VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if
Probab=99.85  E-value=1.8e-19  Score=145.26  Aligned_cols=167  Identities=22%  Similarity=0.253  Sum_probs=132.8

Q ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf             32012210223242233578766667534676653067889998999985104678765543022320487643124457
Q gi|254781110|r  191 FLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPS  270 (420)
Q Consensus       191 ~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt  270 (420)
T Consensus         3 ~dvvlvlD~SgSM~~~d~~--------------~~~rl~~ak~~~~~~i~~~~-------~drvglv~Fs~~a~~~~plT   61 (180)
T cd01467           3 RDIMIALDVSGSMLAQDFV--------------KPSRLEAAKEVLSDFIDRRE-------NDRIGLVVFAGAAFTQAPLT   61 (180)
T ss_pred             CEEEEEEECCCCCCCCCCC--------------CCCHHHHHHHHHHHHHHHCC-------CCEEEEEEECCCCEEECCCC
T ss_conf             2799999898475786667--------------85899999999999997199-------97599999728736733766


Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHH
Q ss_conf             78488999999864046788765388999999861310123345543347767787766624899606867777765348
Q gi|254781110|r  271 WGTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNVNT  350 (420)
Q Consensus       271 ~~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~~~  350 (420)
T Consensus        62 ~d~~~~~~~l~~i~~~~~~ggT~i~~al~~a~~~l~~~~------------------~~~~~ivLlTDG~~n~g~~--~~  121 (180)
T cd01467          62 LDRESLKELLEDIKIGLAGQGTAIGDAIGLAIKRLKNSE------------------AKERVIVLLTDGENNAGEI--DP  121 (180)
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC------------------CCCCEEEEEECCCCCCCCC--CH
T ss_conf             568999999862244532368608999999999764247------------------6663799980588667876--99


Q ss_pred             HHHHHHHHHCCCEEEEEEECCCC-----------CHHHHHHHHHCCCCCEEEECCHHHH
Q ss_conf             99999999789879999954897-----------7899999862189827981798999
Q gi|254781110|r  351 IKICDKAKENFIKIVTISINASP-----------NGQRLLKTCVSSPEYHYNVVNADSL  398 (420)
Q Consensus       351 ~~~c~~~k~~gi~i~tIgf~~~~-----------~~~~~l~~cas~~~~yf~a~~~~~L  398 (420)
T Consensus       122 ~~~~~~a~~~gi~v~tIGvG~~~~~~~~~~~~~~d~~~L~~iA~~tgG~yy~a~~~~eL  180 (180)
T cd01467         122 ATAAELAKNKGVRIYTIGVGKSGSGPKPDGSTILDEDSLVEIADKTGGRIFRALDGFEL  180 (180)
T ss_pred             HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCHHHC
T ss_conf             99999999769989999977898887688876559999999999619979972874649