HHsearch alignment for GI: 254781110 and conserved domain: smart00327
>smart00327 VWA von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.
Probab=99.44 E-value=1.7e-11 Score=93.32 Aligned_cols=160 Identities=19% Similarity=0.227 Sum_probs=116.9
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC-
Q ss_conf 3201221022324223357876666753467665306788999899998510467876554302232048764312445-
Q gi|254781110|r 191 FLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEP- 269 (420)
Q Consensus 191 ~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l- 269 (420)
T Consensus 2 ~di~~vvD~S~SM~--------------------~~~~~~~k~~~~~~i~~l~~~~---~~~~v~vv~f~~~~~~~~~~~ 58 (177)
T smart00327 2 LDVVFLLDGSGSMG--------------------PNRFEKAKEFVLKLVEQLDIGP---DGDRVGLVTFSDDATVLFPLN 58 (177)
T ss_pred CEEEEEEECCCCCC--------------------CHHHHHHHHHHHHHHHHHHCCC---CCCEEEEEEECCCEEEEECCC
T ss_conf 48999992889988--------------------2899999999999999864179---987899999637268997688
Q ss_pred -CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf -7784889999998640467887653889999998613101233455433477677877666248996068677777653
Q gi|254781110|r 270 -SWGTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNV 348 (420)
Q Consensus 270 -t~~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~ 348 (420)
T Consensus 59 ~~~~~~~~~~~i~~l~~-~~~g~t~~~~al~~a~~~~~~~~~~-------------~~~~~~~~iil~TDG~~~~~---~ 121 (177)
T smart00327 59 DSRSKDALLEALASLSY-KLGGGTNLGAALQYALENLFSKSAG-------------SRRGAPKVLILITDGESNDG---G 121 (177)
T ss_pred CCCCHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHHHCC-------------CCCCCCEEEEEEECCCCCCC---H
T ss_conf 86899999999971415-5788776428999999999766503-------------77887428999805887872---5
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCC-CCEEE
Q ss_conf 48999999997898799999548977899999862189-82798
Q gi|254781110|r 349 NTIKICDKAKENFIKIVTISINASPNGQRLLKTCVSSP-EYHYN 391 (420)
Q Consensus 349 ~~~~~c~~~k~~gi~i~tIgf~~~~~~~~~l~~cas~~-~~yf~ 391 (420)
T Consensus 122 ~~~~~~~~~~~~~v~i~~ig~g~~~~~~-~l~~ia~~~~~~~~~ 164 (177)
T smart00327 122 DLLKAAKELKRSGVKVFVVGVGNDVDEE-ELKKLASAPGGVYVF 164 (177)
T ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCHH-HHHHHHHCCCCEEEE
T ss_conf 2999999998679489999958847999-999998489965999