HHsearch alignment of GI: 254781110 and MMDB domain: 1mf7_A_
>1mf7_A (A:) Integrin alpha M; cell adhesion; 1.25A {Homo sapiens}
Probab=99.39 E-value=5.9e-12 Score=95.96 Aligned_cols=184 Identities=14% Similarity=0.139 Sum_probs=137.2
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 44320122102232422335787666675346766530678899989999851046787655430223204876431244
Q gi|254781110|r 189 PIFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIE 268 (420)
Q Consensus 189 ~~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (420)
...++.|++|.|+||. ..+++.++.++..+++.+.. ...+++++.|++......+
T Consensus 4 ~~~di~fviD~SgSM~--------------------~~~~~~~k~~~~~~~~~l~~-----~~~~v~~v~f~~~~~~~~~ 58 (194)
T 1mf7_A 4 EDSDIAFLIDGSGSII--------------------PHDFRRMKEFVSTVMEQLKK-----SKTLFSLMQYSEEFRIHFT 58 (194)
T ss_dssp CCEEEEEEEECCTTSC--------------------HHHHHHHHHHHHHHHHHHCC-----TTEEEEEEEESSSEEEEEC
T ss_pred CCEEEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHCCC-----CCCEEEEEEEEEEEEEEEE
T ss_conf 8816999993889988--------------------68999999999999997076-----8836999999621057630
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 57784889999998640467887653889999998613101233455433477677877666248996068677777653
Q gi|254781110|r 269 PSWGTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNV 348 (420)
Q Consensus 269 lt~~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~ 348 (420)
++.................+.|+|+...++..+.+.+...... ..+..++++|++|||+++......
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~g~t~~~~~l~~~~~~~~~~~~~-------------~~~~~~~~iiliTDG~~~~~~~~~ 125 (194)
T 1mf7_A 59 FKEFQNNPNPRSLVKPITQLLGRTHTATGIRKVVRELFNITNG-------------ARKNAFKILVVITDGEKFGDPLGY 125 (194)
T ss_dssp HHHHHHSCCHHHHHTTCCCCCSCBCHHHHHHHHHHTTTSGGGT-------------CCTTSEEEEEEEESSCCBSCSSCG
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC-------------CCCCCEEEEEEEECCCCCCCCHHH
T ss_conf 4554548999999850101359964207999999988645426-------------767850389998369988980329
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCC--C-HHHHHHHHHCCC--CCEEEECCHHHHHHHHHHHHHHHHCC
Q ss_conf 4899999999789879999954897--7-899999862189--82798179899999999999874202
Q gi|254781110|r 349 NTIKICDKAKENFIKIVTISINASP--N-GQRLLKTCVSSP--EYHYNVVNADSLIHVFQNISQLMVHR 412 (420)
Q Consensus 349 ~~~~~c~~~k~~gi~i~tIgf~~~~--~-~~~~l~~cas~~--~~yf~a~~~~~L~~aF~~Ia~~I~~l 412 (420)
....+.+++.+++++++.++... + ...+|+..|..+ .++|.+.+.++|.++|+.|.+.|.+.
T Consensus 126 --~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~~ia~~~~g~~~~~~~~~~~l~~~~~~i~~~i~~~ 192 (194)
T 1mf7_A 126 --EDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNNFEALKTIQNQLREKIFCI 192 (194)
T ss_dssp --GGTHHHHHHTTEEEEEEEESGGGCSHHHHHHHHHHSCSSHHHHEEEESSGGGGGGGHHHHHHHHHTT
T ss_pred --HHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCCC
T ss_conf --9999999978999999997887666357999999866998661899389999999999998764027