HHsearch results for GI: 254781110 and protein with PDBid: 1atz_A
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 2adf_A 1fe8_A 1ao3_A
Probab=99.52 E-value=6.3e-13 Score=101.29 Aligned_cols=176 Identities=13% Similarity=0.131 Sum_probs=128.0
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 43201221022324223357876666753467665306788999899998510467876554302232048764312445
Q gi|254781110|r 190 IFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEP 269 (420)
Q Consensus 190 ~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (420)
..|+.|++|.|++|. ...++..+..+..+++.+.. .++..|++++.|++......++
T Consensus 5 ~~DivfllD~S~s~~--------------------~~~~~~~k~fv~~~i~~~~i---~~~~~rv~vv~y~~~~~~~~~l 61 (189)
T 1atz_A 5 PLDVILLLDGSSSFP--------------------ASYFDEMKSFAKAFISKANI---GPRLTQVSVLQYGSITTIDVPW 61 (189)
T ss_dssp CEEEEEEEECSSSSC--------------------HHHHHHHHHHHHHHHHHSCB---STTSEEEEEEEESSSEEEEECT
T ss_pred CEEEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHCCC---CCCCCEEEEEEEEEEEEEEEEE
T ss_conf 578999994879988--------------------68999999999999997075---8887489999975013899985
Q ss_pred CC--CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 77--8488999999864046788765388999999861310123345543347767787766624899606867777765
Q gi|254781110|r 270 SW--GTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSN 347 (420)
Q Consensus 270 t~--~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~ 347 (420)
.. +...+.+.++.+. ..+|+|++..+|.++.+.+.....+ .+++.+|++|++|||..+.
T Consensus 62 ~~~~~~~~~~~~i~~l~--~~gg~t~~~~al~~a~~~~~~~~~g-------------~R~~a~k~vvlltdg~~~~---- 122 (189)
T 1atz_A 62 NVVPEKAHLLSLVDVMQ--REGGPSQIGDALGFAVRYLTSEMHG-------------ARPGASKAVVILVTDVSVD---- 122 (189)
T ss_dssp TCCCCHHHHHHHHHTCC--CCCCCCCHHHHHHHHHHHHHSCCTT-------------CCTTSEEEEEEEECSCCSS----
T ss_pred ECCCCHHHHHHHHHHHH--HCCCCCCCCHHHHHHHHHHHHHHCC-------------CCCCCEEEEEEEECCCCCC----
T ss_conf 23675899999999887--4377876325789999997401027-------------9998805899992599865----
Q ss_pred CHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCC--CCEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 348999999997898799999548977899999862189--827981798999999999998742
Q gi|254781110|r 348 VNTIKICDKAKENFIKIVTISINASPNGQRLLKTCVSSP--EYHYNVVNADSLIHVFQNISQLMV 410 (420)
Q Consensus 348 ~~~~~~c~~~k~~gi~i~tIgf~~~~~~~~~l~~cas~~--~~yf~a~~~~~L~~aF~~Ia~~I~ 410 (420)
.....++.+|..||+||+||+|.+.+... |+..|+.+ ++.|.+.+.++|. .+..|.++|.
T Consensus 123 -~~~~~~~~lk~~~i~v~~igig~~~~~~~-l~~ia~~~~~~~~~~~~~~~~l~-~l~~~~~~~~ 184 (189)
T 1atz_A 123 -SVDAAADAARSNRVTVFPIGIGDRYDAAQ-LRILAGPAGDSNVVKLQRIEDLP-TMVTLGNSFL 184 (189)
T ss_dssp -CCHHHHHHHHHTTEEEEEEEESSSSCHHH-HHHHTGGGGGGGCEEESSTTHHH-HHHHSCSHHH
T ss_pred -CHHHHHHHHHHCCCEEEEEEECCCCCHHH-HHHHHCCCCCCCEEEECCHHHHH-HHHHHHHHHH
T ss_conf -18999999998899999999588699999-99985788877589946876688-8999999998