HHsearch results for GI: 254781110 and protein with PDBid: 1q0p_A
>1q0p_A Complement factor B; VON willebrand factor, MAC-1, I domain, A domain, hydrolase; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=99.70 E-value=1e-15 Score=119.38 Aligned_cols=192 Identities=16% Similarity=0.181 Sum_probs=139.2
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC
Q ss_conf 43443201221022324223357876666753467665306788999899998510467876554302232048764312
Q gi|254781110|r 187 ERPIFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKN 266 (420)
Q Consensus 187 ~~~~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (420)
.....++.|++|.|+||. ..+++..+.++..+++.+... ....|++++.|++.....
T Consensus 12 ~~~~~DivfvlD~SgSm~--------------------~~~~~~~k~~~~~li~~~~~~---~~~~rvgvv~fs~~~~~~ 68 (223)
T 1q0p_A 12 PSGSMNIYLVLDGSDSIG--------------------ASNFTGAKKSLVNLIEKVASY---GVKPRYGLVTYATYPKIW 68 (223)
T ss_dssp ---CEEEEEEEECSTTTC--------------------HHHHHHHHHHHHHHHHHHHTT---TCCCEEEEEEESSSEEEE
T ss_pred CCCCEEEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHHCCC---CCCCEEEEEEECCCEEEE
T ss_conf 989861899994888888--------------------288999999999999973368---877589999975937899
Q ss_pred CCCCCCH----HHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 4457784----8899999986404--678876538899999986131012334554334776778776662489960686
Q gi|254781110|r 267 IEPSWGT----EKVRQYVTRDMDS--LILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGE 340 (420)
Q Consensus 267 ~~lt~~~----~~~~~~i~~~~~~--~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~ 340 (420)
.+++... ......++.+... ..+|+|++..+|..+...+..... ......+...|++||+|||.
T Consensus 69 ~~l~~~~~~~~~~~~~~~~~i~~~~~~~~g~T~~~~Al~~a~~~~~~~~~----------~~~~~~~~~~~~ivllTDG~ 138 (223)
T 1q0p_A 69 VKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDD----------VPPEGWNRTRHVIILMTDGL 138 (223)
T ss_dssp ECTTSGGGGCHHHHHHHHHTCCTTSCSCTTCCCHHHHHHHHHHHHCCTTS----------SCCTTGGGCEEEEEEEECSC
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC----------CCCCCCCCCCEEEEEECCCC
T ss_conf 70786302456789999985454216688897599999999999864011----------46666777742899976887
Q ss_pred CCCCCCCCHHHHHHH----------HHHHCCCEEEEEEECCCCCHHHHHHHHHCCC---CCEEEECCHHHHHHHHHHHHH
Q ss_conf 777776534899999----------9997898799999548977899999862189---827981798999999999998
Q gi|254781110|r 341 NNNFKSNVNTIKICD----------KAKENFIKIVTISINASPNGQRLLKTCVSSP---EYHYNVVNADSLIHVFQNISQ 407 (420)
Q Consensus 341 ~~~~~~~~~~~~~c~----------~~k~~gi~i~tIgf~~~~~~~~~l~~cas~~---~~yf~a~~~~~L~~aF~~Ia~ 407 (420)
.|.+.........++ .++..|+.+|+||+|.+.+. ..|+.+|+.+ .+||.+++.++|.++|.+|..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~igvg~~~~~-~~L~~iAs~~~~~~~~~~~~d~~~L~~~~~~i~~ 217 (223)
T 1q0p_A 139 HNMGGDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQ-VNINALASKKDNEQHVFKVKDMENLEDVFYQMID 217 (223)
T ss_dssp CCSSSCTHHHHHHHHHHTTCSCBTTBCCGGGEEEEEEECSSCCCH-HHHHHHSCCCTTCCCEEETTC-------------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH-HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 677898289999998633467999998767965999736875699-9999997498997479990899999999999998
Q ss_pred HHHCC
Q ss_conf 74202
Q gi|254781110|r 408 LMVHR 412 (420)
Q Consensus 408 ~I~~l 412 (420)
+..+|
T Consensus 218 e~~s~ 222 (223)
T 1q0p_A 218 ESQSL 222 (223)
T ss_dssp ----C
T ss_pred HHCCC
T ss_conf 61478