HHsearch results for GI: 254781110 and protein with PDBid: 3k6s_A
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=98.86 E-value=1.7e-09 Score=79.00 Aligned_cols=166 Identities=13% Similarity=0.119 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCH--HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 67889998999985104678765543022320487643124457784--8899999986404678876538899999986
Q gi|254781110|r 227 KMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPSWGT--EKVRQYVTRDMDSLILKPTDSTPAMKQAYQI 304 (420)
Q Consensus 227 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~--~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~ 304 (420)
-++..++-+..++..+. ....+++++.|++.......+.... ......++.+. ...|.|+...||..+...
T Consensus 147 df~~~k~f~~~v~~~f~-----~~~~qvg~vqys~~~~~~f~l~d~~~~~~~~~~v~~i~--~~~g~T~Ta~ai~~~~~~ 219 (1095)
T 3k6s_A 147 NFATMMNFVRAVISQFQ-----RPSTQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLASVH--QLQGFTYTATAIQNVVHR 219 (1095)
T ss_dssp HHHHHHHHHHHHHHSSC-----SSSEEEEEEEESSSEEEEECSHHHHSCSCGGGGTTTCC--CCCSCBCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHCC-----CCCEEEEEEEECCCEEEEEEHHHCCCCCCHHHHHHHEE--ECCCCCCHHHHHHHHHHH
T ss_conf 06899999999986246-----67549999961373258887034333302678754146--136743078889999997
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCC---CHHHHHHH
Q ss_conf 131012334554334776778776662489960686777776534899999999789879999954897---78999998
Q gi|254781110|r 305 LTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNVNTIKICDKAKENFIKIVTISINASP---NGQRLLKT 381 (420)
Q Consensus 305 L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~~~~~~c~~~k~~gi~i~tIgf~~~~---~~~~~l~~ 381 (420)
+..... ...++.+|+||++|||+-+.... ......+.++..||.+|.||++... ....-|+.
T Consensus 220 ~f~~~~-------------g~r~~a~kv~IviTDG~s~~d~~--~l~~~i~~~~~~gI~~~aIGvg~~~~~~~~~~eL~~ 284 (1095)
T 3k6s_A 220 LFHASY-------------GARRDAAKILIVITDGKKEGDSL--DYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELND 284 (1095)
T ss_dssp TTSTTT-------------TCCSSSEEEEEEEESSCCBSCSS--CHHHHHHHHHHHCEEECCEEBSSGGGSTTSSHHHHT
T ss_pred HHHHHH-------------CCCCCCCEEEEEEECCCCCCCCC--CHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHH
T ss_conf 631642-------------68889841799992686456732--034444458648928999972543256433535421
Q ss_pred HHCCCC--CEEEECCHHHHHHHHHHHHHHHHCCEE
Q ss_conf 621898--279817989999999999987420255
Q gi|254781110|r 382 CVSSPE--YHYNVVNADSLIHVFQNISQLMVHRKY 414 (420)
Q Consensus 382 cas~~~--~yf~a~~~~~L~~aF~~Ia~~I~~lr~ 414 (420)
.|+.|+ ++|.+++.++|.++.+.+.+.|..+..
T Consensus 285 iAs~p~~~~~f~v~~~~aL~~i~~~L~~~i~~ieg 319 (1095)
T 3k6s_A 285 IASKPSQEHIFKVEDFDALKDIQNQLKEKIFAIEG 319 (1095)
T ss_dssp TSCSSTTTSCCCBSCSGGGGSSTTTHHHHHHTCCC
T ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEC
T ss_conf 20588740389935557766777764165256454