HHSEARCH alignment of GI: 254781110 and SCOP domain: d1jeya2

Alignment

Probab=99.08  E-value=5.6e-10  Score=80.51  Aligned_cols=183  Identities=11%  Similarity=0.046  Sum_probs=110.1

Q ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC------
Q ss_conf             01221022324223357876666753467665306788999899998510467876554302232048764312------
Q gi|254781110|r  193 IELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKN------  266 (420)
Q Consensus       193 ~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  266 (420)
                      +.|++|.|+||.....+             ...+++..+..++..++..+-...   ...++|++.|++.....      
T Consensus         5 ivf~ID~S~SM~~~d~~-------------~~~s~~~~~~~~~~~~~~~~i~~~---~~d~vglv~f~t~~~~~~~~~~~   68 (220)
T d1jeya2           5 LIFLVDASKAMFESQSE-------------DELTPFDMSIQCIQSVYISKIISS---DRDLLAVVFYGTEKDKNSVNFKN   68 (220)
T ss_dssp             EEEEEECSGGGGCCCSS-------------SSCCHHHHHHHHHHHHHHHHHHTT---CCCEEEEEEESCSSCBSTTCCTT
T ss_pred             EEEEEECCCCCCCCCCC-------------CCCCHHHHHHHHHHHHHHHHHHCC---CCCEEEEEEECCCCCCCCCCCCC
T ss_conf             99999898030745567-------------887789999999999999985079---98779999954666668776530


Q ss_pred             ----CCCCCCHHHHHHHHH---------HH-HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf             ----445778488999999---------86-4046788765388999999861310123345543347767787766624
Q gi|254781110|r  267 ----IEPSWGTEKVRQYVT---------RD-MDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKF  332 (420)
Q Consensus       267 ----~~lt~~~~~~~~~i~---------~~-~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~  332 (420)
                          .++..........+.         .. ......|+|++..+|..+.+.|....                .....|.
T Consensus        69 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~al~~a~~~~~~~~----------------~~~~~k~  132 (220)
T d1jeya2          69 IYVLQELDNPGAKRILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQ----------------FKMSHKR  132 (220)
T ss_dssp             EEEEEEEECCCHHHHHHHHTTSHHHHHHHHHHHHCCSCCCCHHHHHHHHHHHHHTCS----------------SCEEEEE
T ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC----------------CCCCCCE
T ss_conf             355301347428898766553234444443202467888629999999999987401----------------3457758


Q ss_pred             EEEEECCCCCCCCCCCHH---HHHHHHHHHCCCEEEEEEECCCCCH--HHHHH---HHHCCCCCEEEECCHHHHHHHHHH
Q ss_conf             899606867777765348---9999999978987999995489778--99999---862189827981798999999999
Q gi|254781110|r  333 IIFLTDGENNNFKSNVNT---IKICDKAKENFIKIVTISINASPNG--QRLLK---TCVSSPEYHYNVVNADSLIHVFQN  404 (420)
Q Consensus       333 iil~TDG~~~~~~~~~~~---~~~c~~~k~~gi~i~tIgf~~~~~~--~~~l~---~cas~~~~yf~a~~~~~L~~aF~~  404 (420)
                      ||++|||.++.+......   ...++.+++.||.||+|+++.+.+.  ..+.+   ....++...+..+..+.|++.+++
T Consensus       133 IiliTDg~~~~~~~~~~~~~~~~~a~~~~~~gv~i~~i~ig~~~~~d~~~f~~~~l~~~~~~~~~~~~~~~~~l~~l~~~  212 (220)
T d1jeya2         133 IMLFTNEDNPHGNDSAKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLEDLLRK  212 (220)
T ss_dssp             EEEEESCSCTTTTCHHHHHHHHHHHHHHHHHTEEEEEEEBCCTTCCCTTTTGGGTCC--------CCCCCBCSHHHHHHH
T ss_pred             EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             99980599888885124577999988776306517999837878755116689987211366676106864669999999


Q ss_pred             HHH
Q ss_conf             998
Q gi|254781110|r  405 ISQ  407 (420)
Q Consensus       405 Ia~  407 (420)
                      |..
T Consensus       213 i~~  215 (220)
T d1jeya2         213 VRA  215 (220)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             987

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: vWA-like
superfamily: vWA-like
family: Ku70 subunit N-terminal domain
domain: Ku70 subunit N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]