HHSEARCH alignment of GI: 254781110 and SCOP domain: d1n3ya_

Alignment
>d1n3ya_ c.62.1.1 (A:) Integrin alpha-x beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58  E-value=1.4e-14  Score=110.47  Aligned_cols=179  Identities=15%  Similarity=0.152  Sum_probs=129.9

Q ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf             32012210223242233578766667534676653067889998999985104678765543022320487643124457
Q gi|254781110|r  191 FLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPS  270 (420)
Q Consensus       191 ~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt  270 (420)
                      .|+.|++|.|+||.                    ..++...+..+..+++.+.     ....|++++.|++......+|+
T Consensus         3 ~DivfvlD~S~Sm~--------------------~~~~~~~k~~~~~~i~~l~-----~~~~rv~vv~fs~~~~~~~~l~   57 (189)
T d1n3ya_           3 QDIVFLIDGSGSIS--------------------SRNFATMMNFVRAVISQFQ-----RPSTQFSLMQFSNKFQTHFTFE   57 (189)
T ss_dssp             EEEEEEEECCTTSC--------------------HHHHHHHHHHHHHHHTTSC-----TTTEEEEEEEESSSEEEEECHH
T ss_pred             CCEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHHC-----CCCCEEEEEEEECCCEEECCCC
T ss_conf             41999996979988--------------------6999999999999999708-----9987899999531210100235


Q ss_pred             CCHH--HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf             7848--89999998640467887653889999998613101233455433477677877666248996068677777653
Q gi|254781110|r  271 WGTE--KVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNV  348 (420)
Q Consensus       271 ~~~~--~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~  348 (420)
                      ...+  ...+.++.+  ...+|+|+...++.++.+.+.....             ...++.+|++|++|||..+....  
T Consensus        58 ~~~~~~~~~~~i~~~--~~~~g~t~~~~al~~a~~~~f~~~~-------------~~r~~~~kvivllTDG~~~~~~~--  120 (189)
T d1n3ya_          58 EFRRSSNPLSLLASV--HQLQGFTYTATAIQNVVHRLFHASY-------------GARRDAAKILIVITDGKKEGDSL--  120 (189)
T ss_dssp             HHHHCSSGGGGGTTC--CCCCSCBCHHHHHHHHHTTTTSGGG-------------TCCTTSEEEEEEEESSCCBSCSS--
T ss_pred             CCCCHHHHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHC-------------CCCCCCCEEEEEEECCCCCCCCC--
T ss_conf             400288999998754--3433001389999999999841112-------------78888732799995689888832--


Q ss_pred             HHHHHHHHHHHCCCEEEEEEECCCCC---HHHHHHHHHCCC--CCEEEECCHHHHHHHHHHHHHHHHC
Q ss_conf             48999999997898799999548977---899999862189--8279817989999999999987420
Q gi|254781110|r  349 NTIKICDKAKENFIKIVTISINASPN---GQRLLKTCVSSP--EYHYNVVNADSLIHVFQNISQLMVH  411 (420)
Q Consensus       349 ~~~~~c~~~k~~gi~i~tIgf~~~~~---~~~~l~~cas~~--~~yf~a~~~~~L~~aF~~Ia~~I~~  411 (420)
                      ....++..+|+.||.||+||++.+.+   ....|+.+|+.|  +++|.+++.++|.+.++.|.++|-.
T Consensus       121 ~~~~~~~~~~~~gv~i~~Vgig~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~l~~i~~~i~~~ic~  188 (189)
T d1n3ya_         121 DYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFA  188 (189)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGGGGGGHHHHHHHHHT
T ss_pred             CHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCC
T ss_conf             39999999998799438983365556633399999996699866089828999999999999975143


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: vWA-like
superfamily: vWA-like
family: Integrin A (or I) domain
domain: Integrin alpha-x beta2
species: Human (Homo sapiens) [TaxId: 9606]