RPSBLAST alignment of GI: 254781110 and protein with PDBid: 1rrk
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497
Score = 54.2 bits (129), Expect = 5e-08
Identities = 33/244 (13%), Positives = 76/244 (31%), Gaps = 53/244 (21%)
Query: 193 IELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDV 252
I LV+D S S+ + K L+ ++ +
Sbjct: 4 IYLVLDGSDSI--------------------GASNFTGAKKVLVNLIEKVASYG---VKP 40
Query: 253 YMGLIGYTTRVEKNIEPSWGTEKVRQYVTRDMDSLILKP------TDSTPAMKQAYQILT 306
GL+ Y T + ++ S +VT+ ++ + + T++ A++ Y ++
Sbjct: 41 RYGLVTYATYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMM- 99
Query: 307 SDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENN----------NFKSNVNTIKICDK 356
++ + II +TDG +N + + K
Sbjct: 100 ---------SWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKN 150
Query: 357 AKENFIKIVTISINASPNGQRLLKTCVSSP---EYHYNVVNADSLIHVFQNISQLMVHRK 413
+E+++ + + N Q + S ++ V + + L VF +
Sbjct: 151 PREDYLDVYVFGVGPLVN-QVNINALASKKDNEQHVCKVKDMECLEDVFYQMIDESQSLS 209
Query: 414 YSVI 417
+
Sbjct: 210 LCGM 213