RPSBLAST alignment of GI: 254781110 and protein with PDBid: 1rrk

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497
 Score = 54.2 bits (129), Expect = 5e-08
 Identities = 33/244 (13%), Positives = 76/244 (31%), Gaps = 53/244 (21%)

Query: 193 IELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDV 252
           I LV+D S S+                      +     K  L+  ++ +          
Sbjct: 4   IYLVLDGSDSI--------------------GASNFTGAKKVLVNLIEKVASYG---VKP 40

Query: 253 YMGLIGYTTRVEKNIEPSWGTEKVRQYVTRDMDSLILKP------TDSTPAMKQAYQILT 306
             GL+ Y T  +  ++ S        +VT+ ++ +  +       T++  A++  Y ++ 
Sbjct: 41  RYGLVTYATYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMM- 99

Query: 307 SDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENN----------NFKSNVNTIKICDK 356
                    ++            +  II +TDG +N            +  +   K    
Sbjct: 100 ---------SWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKN 150

Query: 357 AKENFIKIVTISINASPNGQRLLKTCVSSP---EYHYNVVNADSLIHVFQNISQLMVHRK 413
            +E+++ +    +    N Q  +    S     ++   V + + L  VF  +        
Sbjct: 151 PREDYLDVYVFGVGPLVN-QVNINALASKKDNEQHVCKVKDMECLEDVFYQMIDESQSLS 209

Query: 414 YSVI 417
              +
Sbjct: 210 LCGM 213