HHsearch alignment for GI: 254781111 and conserved domain: pfam00494
>pfam00494 SQS_PSY Squalene/phytoene synthase.
Probab=93.61 E-value=0.28 Score=26.83 Aligned_cols=74 Identities=16% Similarity=0.214 Sum_probs=49.2
Q ss_pred HHHHCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 66411332221000-00036799999998634899999999997598889999999999998499999867653443206
Q gi|254781111|r 157 QGMLGGQMLDIQDE-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 (237)
Q Consensus 157 ~~l~~GQ~~dl~~~-~~~~~~y~~i~~~KTa~lf~~~~~~ga~lag~~~~~~~~l~~~g~~lGiafQi~DD~lD~~~D~~ 235 (237)
T Consensus 92 ~~li~g~~~Dl~~~~~~t~~dL~~Y~~~vAg~Vg~l~~~i---~g~~~--~~~~~~~~A~~lG~AlQltNilRDi~eD~~ 166 (262)
T pfam00494 92 LELIDGMEMDLEKDRYETLAELEEYCYRVAGVVGLLLLRL---LGVRD--DAEAADEAARHLGLALQLTNILRDVGEDAR 166 (262)
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---HCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999987367999999999999988168999999999---57789--458899999999999999999974699983