HHsearch results for GI: 254781111 and protein with PDBid: 1yhl_A

>1yhl_A Farnesyl pyrophosphate synthase; farnesyl diphosphate synthase, bisphosphonate, dimethyl allyl pyrophosphate sulfate, FPPS, transferase; HET: DMA RIS; 1.95A {Trypanosoma cruzi} PDB: 1yhk_A* 1yhm_A* 3iba_A* 3ick_A* 3icm_A* 3icn_A* 3icz_A* 3id0_A*
Probab=100.00  E-value=0  Score=344.08  Aligned_cols=195  Identities=23%  Similarity=0.239  Sum_probs=157.5

Q ss_pred             CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC-----------CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             15799999875058600799999999996178822-----------2240246888899999864776544532234455
Q gi|254781111|r   36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL-----------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK  104 (237)
Q Consensus        36 ~~~l~~~~~y~l~gGKr~R~~l~l~~~~~~~~~~~-----------~~~~~AaavEllH~asLihDDI~~~D~s~~RRG~  104 (237)
                      ...+.+.++|.+.||||+||.|++++++++++...           .+..+|++||++|+||||||||  ||+|++|||+
T Consensus        33 ~~~~~~~~~y~~~GGKr~Rp~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~iEllH~asLihDDI--~D~s~~RRG~  110 (362)
T 1yhl_A           33 ARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDI--MDGSVMRRGK  110 (362)
T ss_dssp             HHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCCEETTE
T ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCC
T ss_conf             99999999645788531027999999999636434554325677899999999999999999997322--6799888999


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH---------------
Q ss_conf             66543243452013322223347999973102341267888887653222356641133222100---------------
Q gi|254781111|r  105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---------------  169 (237)
Q Consensus       105 pt~h~~~G~~~AIl~Gd~l~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GQ~~dl~~---------------  169 (237)
                      ||+|++||++.||++||+|++.++..+.............+++..+++..  ...+.||.+|+.+               
T Consensus       111 pt~h~~~G~~~ai~~gD~l~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~GQ~~d~~~~~~~~~~d~e~~~~~  188 (362)
T 1yhl_A          111 PCWYRFPGVTTQCAINDGIILKSWTQIMAWHYFADRPFLKDLLCLFQKVD--YATAVGQMYDVTSMCDSNKLDPEVAQPM  188 (362)
T ss_dssp             ECGGGSTTTHHHHHHHHHHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHH--HHHHHHHHHHHTTTBCGGGCCTTSCCCB
T ss_pred             CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHCCCCHHHHHHHHC
T ss_conf             87423068189999663999999999998752468455899999999999--9999998704124404631118988630


Q ss_pred             ----HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             ----0000367999999986348-99999999997598889-99999999999849999986765344320
Q gi|254781111|r  170 ----EFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEEDL  234 (237)
Q Consensus       170 ----~~~~~~~y~~i~~~KTa~l-f~~~~~~ga~lag~~~~-~~~~l~~~g~~lGiafQi~DD~lD~~~D~  234 (237)
                          ..+++++|++|+.+|||+| |.+|+.+|++++|.+++ ..+.+.+||.++|++|||+||++|++||.
T Consensus       189 ~~~~~~~t~~~Y~~~i~~KTa~L~~~~~~~~g~~~~g~~~~~~~~~l~~~g~~lGiaFQI~DDilD~~~d~  259 (362)
T 1yhl_A          189 TTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEAAASVEMNLVERVAHLIGEYFQVQDDVMDCFTPP  259 (362)
T ss_dssp             CSSCTTCSHHHHHHHHHHHTHHHHTHHHHHHHHHHTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             25620058999999999987467899999877877136318899888767879999999999988700797