HHsearch results for GI: 254781111 and protein with PDBid: 1yhl_A
>1yhl_A Farnesyl pyrophosphate synthase; farnesyl diphosphate synthase, bisphosphonate, dimethyl allyl pyrophosphate sulfate, FPPS, transferase; HET: DMA RIS; 1.95A {Trypanosoma cruzi} PDB: 1yhk_A* 1yhm_A* 3iba_A* 3ick_A* 3icm_A* 3icn_A* 3icz_A* 3id0_A*
Probab=100.00 E-value=0 Score=344.08 Aligned_cols=195 Identities=23% Similarity=0.239 Sum_probs=157.5
Q ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC-----------CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 15799999875058600799999999996178822-----------2240246888899999864776544532234455
Q gi|254781111|r 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL-----------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 (237)
Q Consensus 36 ~~~l~~~~~y~l~gGKr~R~~l~l~~~~~~~~~~~-----------~~~~~AaavEllH~asLihDDI~~~D~s~~RRG~ 104 (237)
...+.+.++|.+.||||+||.|++++++++++... .+..+|++||++|+|||||||| ||+|++|||+
T Consensus 33 ~~~~~~~~~y~~~GGKr~Rp~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~iEllH~asLihDDI--~D~s~~RRG~ 110 (362)
T 1yhl_A 33 ARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDI--MDGSVMRRGK 110 (362)
T ss_dssp HHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCCEETTE
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCC
T ss_conf 99999999645788531027999999999636434554325677899999999999999999997322--6799888999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH---------------
Q ss_conf 66543243452013322223347999973102341267888887653222356641133222100---------------
Q gi|254781111|r 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------------- 169 (237)
Q Consensus 105 pt~h~~~G~~~AIl~Gd~l~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GQ~~dl~~--------------- 169 (237)
||+|++||++.||++||+|++.++..+.............+++..+++.. ...+.||.+|+.+
T Consensus 111 pt~h~~~G~~~ai~~gD~l~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~GQ~~d~~~~~~~~~~d~e~~~~~ 188 (362)
T 1yhl_A 111 PCWYRFPGVTTQCAINDGIILKSWTQIMAWHYFADRPFLKDLLCLFQKVD--YATAVGQMYDVTSMCDSNKLDPEVAQPM 188 (362)
T ss_dssp ECGGGSTTTHHHHHHHHHHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHH--HHHHHHHHHHHTTTBCGGGCCTTSCCCB
T ss_pred CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHCCCCHHHHHHHHC
T ss_conf 87423068189999663999999999998752468455899999999999--9999998704124404631118988630
Q ss_pred ----HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----0000367999999986348-99999999997598889-99999999999849999986765344320
Q gi|254781111|r 170 ----EFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEEDL 234 (237)
Q Consensus 170 ----~~~~~~~y~~i~~~KTa~l-f~~~~~~ga~lag~~~~-~~~~l~~~g~~lGiafQi~DD~lD~~~D~ 234 (237)
..+++++|++|+.+|||+| |.+|+.+|++++|.+++ ..+.+.+||.++|++|||+||++|++||.
T Consensus 189 ~~~~~~~t~~~Y~~~i~~KTa~L~~~~~~~~g~~~~g~~~~~~~~~l~~~g~~lGiaFQI~DDilD~~~d~ 259 (362)
T 1yhl_A 189 TTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEAAASVEMNLVERVAHLIGEYFQVQDDVMDCFTPP 259 (362)
T ss_dssp CSSCTTCSHHHHHHHHHHHTHHHHTHHHHHHHHHHTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 25620058999999999987467899999877877136318899888767879999999999988700797