HHsearch results for GI: 254781111 and protein with PDBid: 3m0g_A

>3m0g_A Farnesyl diphosphate synthase; structural genomics, protein structure initiative, NYSGXRC, isoprene biosynthesis, transferase, PSI-2; 1.90A {Rhodobacter capsulatus} PDB: 3lvs_A
Probab=100.00  E-value=0  Score=357.14  Aligned_cols=220  Identities=38%  Similarity=0.637  Sum_probs=185.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf             48999999999999999999997675302457157999998750586007999999999961788222240246888899
Q gi|254781111|r    4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH   83 (237)
Q Consensus         4 ~l~~~l~~~~~~id~~l~~~l~~~~~~~~~~~~~~l~~~~~y~l~gGKr~R~~l~l~~~~~~~~~~~~~~~~AaavEllH   83 (237)
                      ++.++|++..+.|+..+.+.+...       .+..+.++++|+++||||+||.|++++++++|++++.++++|+|||++|
T Consensus         2 ~l~~~l~~~~~~v~~~l~~~~~~~-------~~~~l~~~~~y~~~gGKrlRp~L~l~~~~~~g~~~~~~~~~A~aiEllH   74 (297)
T 3m0g_A            2 SLSERLKEVQDAVETAMAAAIGRL-------PAGDLRDAMAYAAQGGKRLRAFLAIESAAIHGISMAQAMPAALAVEALH   74 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTS-------CCSHHHHHHHHHHSCSCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCC-------CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf             879999999999999999986438-------8088999998474575189999999999880969899999999999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99986477654453223445566543243452013322223347999973102341267888887653222356641133
Q gi|254781111|r   84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ  163 (237)
Q Consensus        84 ~asLihDDI~~~D~s~~RRG~pt~h~~~G~~~AIl~Gd~l~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GQ  163 (237)
                      +||||||||+++|+|++|||+||+|.+||++.|||+||++++.+|+++++...... ............+.+..+++.||
T Consensus        75 ~asLIHDDI~d~D~s~~RRG~pt~h~~~G~~~AIl~Gd~l~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~q  153 (297)
T 3m0g_A           75 AYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQTLAFELCTDPVLGSA-ENRVALVAALAQASGAEGMVYGQ  153 (297)
T ss_dssp             HHHHHHHTSTTTTCCSEETTEECHHHHSCHHHHHHHHHHHHHHHHHHTTCGGGCCH-HHHHHHHHHHHHHHSTTTHHHHH
T ss_pred             HHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999187646898744489964687708547677511787767999875201208-88999999999999999999773


Q ss_pred             CCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2221000----0003679999999863489999999999759888999999999999849999986765344320
Q gi|254781111|r  164 MLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL  234 (237)
Q Consensus       164 ~~dl~~~----~~~~~~y~~i~~~KTa~lf~~~~~~ga~lag~~~~~~~~l~~~g~~lGiafQi~DD~lD~~~D~  234 (237)
                      ..++...    ..+++.|++|+.+|||+||.++|.+|+++++.++.   .+.+||+++|++|||+||++|++||.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~KTa~l~~~~~~~~~~~~~~~~~---~~~~~g~~lG~aFQi~DDlld~~gd~  225 (297)
T 3m0g_A          154 ALDIAAETAAVPLTLDEIIRLQAGKTGALISFAAQAGAILAGADRG---PLTAYATALGLAFQIADDILDVEGNE  225 (297)
T ss_dssp             HHHHHHTTSSSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCCH---HHHHHHHHHHHHHHHHTTCC------
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH---HHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             7988866226307899999987999999999999989987499789---99987788888999888988731787