HHsearch results for GI: 254781111 and protein with PDBid: 3mzv_A

>3mzv_A Decaprenyl diphosphate synthase; transferase, structural genomics, PSI-2, protein structure initiative; 1.90A {Rhodobacter capsulatus}
Probab=100.00  E-value=0  Score=357.66  Aligned_cols=212  Identities=27%  Similarity=0.485  Sum_probs=181.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf             8999999999999999999997675302457157999998750-586007999999999961788222240246888899
Q gi|254781111|r    5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH   83 (237)
Q Consensus         5 l~~~l~~~~~~id~~l~~~l~~~~~~~~~~~~~~l~~~~~y~l-~gGKr~R~~l~l~~~~~~~~~~~~~~~~AaavEllH   83 (237)
                      +.+.+++....|+..|.+       .+.+...+.+.++.+|.+ .||||+||.|++++++++|++++.++++|+++|++|
T Consensus        14 l~~~l~~~l~~v~~~i~~-------~l~s~~~~~i~~~~~~~~~~gGKr~Rp~l~ll~~~~~~~~~~~~~~~A~aiEliH   86 (341)
T 3mzv_A           14 LAQALAEDMAAVNALIRE-------RMSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYGGPFHVHLAATVEFIH   86 (341)
T ss_dssp             HHHHTHHHHHHHHHHHHH-------HSCCSSCTHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH-------HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf             999999999999999999-------8444771679999999981899628899999999983997077999999999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99986477654453223445566543243452013322223347999973102341267888887653222356641133
Q gi|254781111|r   84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ  163 (237)
Q Consensus        84 ~asLihDDI~~~D~s~~RRG~pt~h~~~G~~~AIl~Gd~l~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GQ  163 (237)
                      +||||||||  ||+|++|||+||+|.+||++.|||+||||++.+|+.+++....       +.+..++++  ...++.||
T Consensus        87 ~asLIHDDI--~D~~~~RRG~pt~~~~~G~~~AIl~GD~L~~~a~~~l~~~~~~-------~~~~~~~~~--~~~~~~Gq  155 (341)
T 3mzv_A           87 TATLLHDDV--VDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTDTGNM-------RVMEILANA--SAVIAEGE  155 (341)
T ss_dssp             HHHHHHHHC--------CTTSCCHHHHSCHHHHHHHHHHHHHHHHHHHGGGCCH-------HHHHHHHHH--HHHHHHHH
T ss_pred             HHHHHCCCC--CCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH-------HHHHHHHHH--HHHHHCCH
T ss_conf             999981876--6678655699975330682499998899999999864213654-------799999998--67760600


Q ss_pred             CCCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2221000---0003679999999863489999999999759888999999999999849999986765344320
Q gi|254781111|r  164 MLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL  234 (237)
Q Consensus       164 ~~dl~~~---~~~~~~y~~i~~~KTa~lf~~~~~~ga~lag~~~~~~~~l~~~g~~lGiafQi~DD~lD~~~D~  234 (237)
                      .+|+.+.   .+++++|++|+.+|||+||.++|.+|+++++++++..+.+.+||+++|+||||+||++|++||.
T Consensus       156 ~~~~~~~~~~~~~~~~yl~~i~~KTa~L~~~~~~~ga~l~~~~~~~~~~l~~~G~~lG~AFQI~DD~ld~~~d~  229 (341)
T 3mzv_A          156 VLQLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGIIGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGGKS  229 (341)
T ss_dssp             HHHHHHTTCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             79987502679989999999999999999999998410117998999999999999999999888876530786