HHsearch results for GI: 254781111 and protein with PDBid: 3mzv_A
>3mzv_A Decaprenyl diphosphate synthase; transferase, structural genomics, PSI-2, protein structure initiative; 1.90A {Rhodobacter capsulatus}
Probab=100.00 E-value=0 Score=357.66 Aligned_cols=212 Identities=27% Similarity=0.485 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 8999999999999999999997675302457157999998750-586007999999999961788222240246888899
Q gi|254781111|r 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 (237)
Q Consensus 5 l~~~l~~~~~~id~~l~~~l~~~~~~~~~~~~~~l~~~~~y~l-~gGKr~R~~l~l~~~~~~~~~~~~~~~~AaavEllH 83 (237)
+.+.+++....|+..|.+ .+.+...+.+.++.+|.+ .||||+||.|++++++++|++++.++++|+++|++|
T Consensus 14 l~~~l~~~l~~v~~~i~~-------~l~s~~~~~i~~~~~~~~~~gGKr~Rp~l~ll~~~~~~~~~~~~~~~A~aiEliH 86 (341)
T 3mzv_A 14 LAQALAEDMAAVNALIRE-------RMSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYGGPFHVHLAATVEFIH 86 (341)
T ss_dssp HHHHTHHHHHHHHHHHHH-------HSCCSSCTHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-------HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 999999999999999999-------8444771679999999981899628899999999983997077999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99986477654453223445566543243452013322223347999973102341267888887653222356641133
Q gi|254781111|r 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 (237)
Q Consensus 84 ~asLihDDI~~~D~s~~RRG~pt~h~~~G~~~AIl~Gd~l~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GQ 163 (237)
+|||||||| ||+|++|||+||+|.+||++.|||+||||++.+|+.+++.... +.+..++++ ...++.||
T Consensus 87 ~asLIHDDI--~D~~~~RRG~pt~~~~~G~~~AIl~GD~L~~~a~~~l~~~~~~-------~~~~~~~~~--~~~~~~Gq 155 (341)
T 3mzv_A 87 TATLLHDDV--VDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTDTGNM-------RVMEILANA--SAVIAEGE 155 (341)
T ss_dssp HHHHHHHHC--------CTTSCCHHHHSCHHHHHHHHHHHHHHHHHHHGGGCCH-------HHHHHHHHH--HHHHHHHH
T ss_pred HHHHHCCCC--CCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH-------HHHHHHHHH--HHHHHCCH
T ss_conf 999981876--6678655699975330682499998899999999864213654-------799999998--67760600
Q ss_pred CCCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2221000---0003679999999863489999999999759888999999999999849999986765344320
Q gi|254781111|r 164 MLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 (237)
Q Consensus 164 ~~dl~~~---~~~~~~y~~i~~~KTa~lf~~~~~~ga~lag~~~~~~~~l~~~g~~lGiafQi~DD~lD~~~D~ 234 (237)
.+|+.+. .+++++|++|+.+|||+||.++|.+|+++++++++..+.+.+||+++|+||||+||++|++||.
T Consensus 156 ~~~~~~~~~~~~~~~~yl~~i~~KTa~L~~~~~~~ga~l~~~~~~~~~~l~~~G~~lG~AFQI~DD~ld~~~d~ 229 (341)
T 3mzv_A 156 VLQLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGIIGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGGKS 229 (341)
T ss_dssp HHHHHHTTCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 79987502679989999999999999999999998410117998999999999999999999888876530786