HHsearch results for GI: 254781111 and protein with PDBid: 3p8l_A
>3p8l_A Geranyltranstransferase; isoprenyl synthase, structural genomics, PSI, protein struct initiative, nysgrc; 2.00A {Enterococcus faecalis}
Probab=100.00 E-value=0 Score=372.35 Aligned_cols=224 Identities=37% Similarity=0.574 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCCCCC-CCCCHHHHHH
Q ss_conf 348999999999999999999997675302457157999998750-58600799999999996178822-2240246888
Q gi|254781111|r 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIE 80 (237)
Q Consensus 3 ~~l~~~l~~~~~~id~~l~~~l~~~~~~~~~~~~~~l~~~~~y~l-~gGKr~R~~l~l~~~~~~~~~~~-~~~~~AaavE 80 (237)
.+|.+.+++....|++.|++++.+. ..++.+.+++.|.+ .||||+||.|++++++++|++.+ .++++|++||
T Consensus 8 ~~~~~~~~~~~~~v~~~l~~~~~~~------~~~~~l~~~~~y~l~~gGKr~Rp~L~l~~~~~~g~~~~~~~~~~A~avE 81 (302)
T 3p8l_A 8 HSLTNFSQQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLE 81 (302)
T ss_dssp CCSTTHHHHHHHHHHHHHHHHHHHS------CCCHHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 2199999999999999999998734------8877899999988708963086999999999839995177899999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999986477654453223445566543243452013322223347999973102341267888887653222356641
Q gi|254781111|r 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 (237)
Q Consensus 81 llH~asLihDDI~~~D~s~~RRG~pt~h~~~G~~~AIl~Gd~l~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (237)
++|+||||||||+++|+|++|||+||+|.+||++.||++||+|++.+|++++.... ......+.+..++++.+.++++
T Consensus 82 llH~asLIHDDI~d~D~~~~RRg~pt~~~~~G~~~Ail~GD~l~~~a~~ll~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 159 (302)
T 3p8l_A 82 MIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQL--GLSEKVLLMQQLAKAAGNQGMV 159 (302)
T ss_dssp HHHHHHHHHHHSTTTTCCSEETTEECHHHHHCHHHHHHHHHHHHHHHHHHHHTSSC--CHHHHHHHHHHHHHHHSTTTHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999788613577754356886010248899998114879999999987037--8179999999999998899999
Q ss_pred CCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 133222100--00003679999999863489999999999759888999999999999849999986765344320
Q gi|254781111|r 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 (237)
Q Consensus 161 ~GQ~~dl~~--~~~~~~~y~~i~~~KTa~lf~~~~~~ga~lag~~~~~~~~l~~~g~~lGiafQi~DD~lD~~~D~ 234 (237)
.||.+|+.. ..+++++|++|+++|||+||.+||.+|+++++++++..+.+.+||.++|++|||+||++|++||.
T Consensus 160 ~Gq~~d~~~~~~~~~~~~y~~i~~~KTa~lf~~~~~~ga~la~~~~~~~~~l~~~g~~lGiafQi~DD~lD~~~~~ 235 (302)
T 3p8l_A 160 SGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTE 235 (302)
T ss_dssp HHHHHHHHTTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 9989998700457989999999997799999999973130048857889999999999888864159878534898