BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781111|ref|YP_003065524.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus str. psy62] (237 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781111|ref|YP_003065524.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040788|gb|ACT57584.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 237 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 237/237 (100%), Positives = 237/237 (100%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE Sbjct: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG Sbjct: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI Sbjct: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK Sbjct: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 >gi|315122480|ref|YP_004062969.1| geranyltranstransferase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495882|gb|ADR52481.1| geranyltranstransferase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 297 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 167/233 (71%), Positives = 197/233 (84%), Gaps = 4/233 (1%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 MN L KLQENS++I+++L+DLL SH + NDRL SAIRYA+LGGK IRSFLV E Sbjct: 1 MNDDLLLKLQENSQKIESLLNDLL----SHQSSYLNDRLRSAIRYAILGGKNIRSFLVAE 56 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 CASLF +++ T LRVGAAIEC+HCYSLIHDDLPSMDNGYIRRGKPT+H+QYDE TAI+AG Sbjct: 57 CASLFGLSNPTVLRVGAAIECVHCYSLIHDDLPSMDNGYIRRGKPTLHLQYDEATAILAG 116 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 N LLTYAFEII SP+TQLKD+IRS+L LSL N G+QGMLGGQMLDIQ+E +DE Q+ I Sbjct: 117 NSLLTYAFEIICSPETQLKDSIRSELTLSLARNAGIQGMLGGQMLDIQNECLDEKQLLTI 176 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 Q+MKTG+LM FACE+GAI+AH +Q EK RLR +GENLGI+FQL DDLLD EE+ Sbjct: 177 QEMKTGSLMRFACEAGAIIAHTNQEEKARLRYYGENLGIVFQLVDDLLDFEEN 229 >gi|190893863|ref|YP_001980405.1| geranyltranstransferase [Rhizobium etli CIAT 652] gi|190699142|gb|ACE93227.1| geranyltranstransferase protein [Rhizobium etli CIAT 652] Length = 327 Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 118/230 (51%), Positives = 167/230 (72%), Gaps = 3/230 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++L+ N++ I+ +LD LLL A + + L A+ YA+L GGK++R FLV E A+L Sbjct: 33 TRLKNNAREIEALLDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPFLVVESAALL 92 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + ALR+GAA+EC+HCYSL+HDDLP+MD+ IRRGKPTVH+++DE TAI+AG+ LLT Sbjct: 93 GGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDIRRGKPTVHVKFDEATAILAGDSLLT 152 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 YAF+I+++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + +Q M Sbjct: 153 YAFDIVAAPETALPDTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAM 212 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD D Sbjct: 213 KTGALIRFACEAGAILAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSD 262 >gi|319899404|ref|YP_004159501.1| geranyltranstransferase [Bartonella clarridgeiae 73] gi|319403372|emb|CBI76931.1| geranyltranstransferase [Bartonella clarridgeiae 73] Length = 301 Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 109/231 (47%), Positives = 158/231 (68%), Gaps = 16/231 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L +++ ++ LD LL A + + + L++A+R+ +L GGK++R FLV + A++F++ Sbjct: 8 LAKHAYNVEKRLDTLLSHKAQNGEITRPEILINAMRHGVLNGGKRLRPFLVIQSAAIFDI 67 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +L +G A+EC+HCYSLIHDDLP++DN +RRGKPTVH+ +DE TAI+AGN LLT+A Sbjct: 68 PPEHSLDIGVALECLHCYSLIHDDLPALDNDTLRRGKPTVHVAFDEATAILAGNALLTFA 127 Query: 128 FEIIS-------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVF 178 FEII+ SPKT++ L+ +LT GL GM+GGQMLD++ E DE+ Sbjct: 128 FEIIAHKEAYSFSPKTKI------DLITALTQAAGLGGMIGGQMLDLEAEKKPQDESATI 181 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +Q+MKT ALM FAC++GAIM AS+ ++L FG +G+ FQL DDLLD Sbjct: 182 TLQQMKTAALMRFACQAGAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLD 232 >gi|319404799|emb|CBI78400.1| geranyltranstransferase [Bartonella rochalimae ATCC BAA-1498] Length = 300 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 156/224 (69%), Gaps = 3/224 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L ++++ ++ LD LL A + + + L++A+R+ +L GGK++R FLV + A+LF++ Sbjct: 8 LAKHAQNVEKRLDILLSHKAQNDEITRPEILINAMRHGVLNGGKRLRPFLVIQSAALFDI 67 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + +L +G A+ECIHCYSLIHDDLP++DN +RRG+PTVHI +DE TAI+AGN LLT+A Sbjct: 68 SPEDSLDIGVALECIHCYSLIHDDLPALDNDTLRRGQPTVHIAFDEGTAILAGNALLTFA 127 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185 FEII+ R +L+ +LT GL GM+GGQMLD++ E +E+ +Q+MKT Sbjct: 128 FEIIAHKACSFSSKTRIELITALTQAAGLGGMIGGQMLDLEAEKKPQNESATITLQQMKT 187 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AL+ FAC++GAIM AS+ +L FG ++G+ FQL DDLLD Sbjct: 188 AALIRFACQAGAIMGRASKTLTHKLASFGTHIGLAFQLTDDLLD 231 >gi|218463158|ref|ZP_03503249.1| geranyltranstransferase protein [Rhizobium etli Kim 5] Length = 304 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 119/230 (51%), Positives = 167/230 (72%), Gaps = 3/230 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++L+ N++ I+ +LD LLL A + + L SA+ YA+L GGK++R FLV E A+L Sbjct: 10 TRLKNNAREIEALLDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVESAALL 69 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TAI+AG+ LLT Sbjct: 70 GGDAKAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHIKFDEATAILAGDSLLT 129 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 YAF+I+++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + +Q M Sbjct: 130 YAFDIVAAPETALPDASKASLVLALARAAGLGGMAGGQALDLAAEKQAQDEAGIIRLQAM 189 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ FACE+GAI+A + Q+++ RLR FGE +G+ FQLADD+LD D Sbjct: 190 KTGALIRFACEAGAIIAGSPQDDRRRLRAFGEKIGLAFQLADDILDLTSD 239 >gi|327191787|gb|EGE58789.1| geranyltranstransferase protein [Rhizobium etli CNPAF512] Length = 387 Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 117/230 (50%), Positives = 167/230 (72%), Gaps = 3/230 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++L+ N++ I+ +LD LLL A + + L A+ YA+L GGK++R FLV E A+L Sbjct: 93 TRLKNNAREIEALLDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPFLVVESAALL 152 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVH+++DE TAI+AG+ LLT Sbjct: 153 GGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATAILAGDSLLT 212 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 YAF+I+++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + +Q M Sbjct: 213 YAFDIVAAPETALPDTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAM 272 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD D Sbjct: 273 KTGALIRFACEAGAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSD 322 >gi|86359590|ref|YP_471482.1| geranyltranstransferase protein [Rhizobium etli CFN 42] gi|86283692|gb|ABC92755.1| geranyltranstransferase protein [Rhizobium etli CFN 42] Length = 331 Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 117/230 (50%), Positives = 169/230 (73%), Gaps = 3/230 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++L+ N+++I+ +L LL A + + L SA+ YA+L GGK++R FLV E A+L Sbjct: 37 TRLKNNARKIEALLVALLSPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVAESAALL 96 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVH+++DE TAI+AG+ LLT Sbjct: 97 GGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATAILAGDSLLT 156 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 YAF+I+++P+T L D+ ++ L+L+L GL GM GGQ LD+ E DET + +Q M Sbjct: 157 YAFDIVAAPETALPDSSKASLVLALARAAGLGGMAGGQALDLAAEKKAPDETGIIRLQAM 216 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD D Sbjct: 217 KTGALIRFACEAGAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSD 266 >gi|153008460|ref|YP_001369675.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] gi|151560348|gb|ABS13846.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] Length = 304 Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 117/228 (51%), Positives = 155/228 (67%), Gaps = 3/228 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + ++ L LL Q + +RLL+A+R+ +L GGK++R FLV E A+LF Sbjct: 12 LNHRAMEVEMALTGLLDQRLKTGEIARPERLLAAMRHGVLNGGKRLRPFLVVESAALFGK 71 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+GLLTYA Sbjct: 72 GSDAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDGLLTYA 131 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185 F+IISS +T L IR QL+ +L GL GM+GGQ LD+ E DE + +Q MKT Sbjct: 132 FDIISSDETDLDAAIRLQLVSALARASGLGGMVGGQALDLMAETSKPDEAGIITLQAMKT 191 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ FACE+GAI+A+AS ++ER+ FG +G+ FQLADDLLD D Sbjct: 192 GALIRFACEAGAIIANASSEDRERMAEFGSAIGLAFQLADDLLDVTAD 239 >gi|319406284|emb|CBI79921.1| geranyltranstransferase [Bartonella sp. AR 15-3] Length = 300 Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 151/224 (67%), Gaps = 3/224 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L +++ ++ LD LL A + + + L++A+RY +L GGK+ R FLV + A+LF++ Sbjct: 8 LAKHAHNVEKRLDILLSHKAQNGEISRPEILINAMRYGVLNGGKRFRPFLVIQSAALFDI 67 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +L +G A+EC+HCYSLIHDDLP++DN +RRGKPTVH +DE TAI+AGN LLT+A Sbjct: 68 PPEHSLDIGVALECLHCYSLIHDDLPALDNDTLRRGKPTVHTAFDEGTAILAGNALLTFA 127 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185 FEII+ + L+ +LT GL GM+GGQMLD++ E +E+ +Q+MKT Sbjct: 128 FEIIAHKACSFSSKTKIDLITALTQAAGLGGMIGGQMLDLEAEKKPQNESATITLQQMKT 187 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AL+ FAC++GAIM AS+ ++L FG +G+ FQL DDLLD Sbjct: 188 AALIRFACQAGAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLD 231 >gi|49474704|ref|YP_032746.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella quintana str. Toulouse] gi|49240208|emb|CAF26676.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella quintana str. Toulouse] Length = 301 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 104/220 (47%), Positives = 150/220 (68%), Gaps = 8/220 (3%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 +R+DT+L D + + + + L+ A+RY +L GGK++R FLV + +LF++ Sbjct: 17 RRLDTLLSDQV----QNGEISRPEALIKAMRYGVLNGGKRLRPFLVIQSGALFDIPAEYC 72 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L V +A+EC+HCYSLIHDDLP+MDN +RRG+PTVHI +DE TAI+AGN LLT+AFEII+ Sbjct: 73 LDVASALECVHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNALLTFAFEIIA 132 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALM 189 + L + +L+ +L + GL GM+GGQMLD++ E + + +Q MKT AL+ Sbjct: 133 HKASTLPFETKIKLITTLAQSAGLGGMIGGQMLDLEAEKKPQDSAISILTLQHMKTAALI 192 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 FAC++GAI+ +AS+ E+L FG LG+ FQL DDLLD Sbjct: 193 SFACQAGAIIGNASKELTEKLAAFGTYLGLAFQLTDDLLD 232 >gi|209551400|ref|YP_002283317.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537156|gb|ACI57091.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 304 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 118/230 (51%), Positives = 164/230 (71%), Gaps = 3/230 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++L+ N++ I+ +LD LLL A + + L SA+ YA+L GGK++R FLV E A+L Sbjct: 10 TRLKNNAREIEALLDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVESAALL 69 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + A RVGAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TAI+AG+ LLT Sbjct: 70 GGDDEAARRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGDSLLT 129 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 YAF+II++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + +Q M Sbjct: 130 YAFDIIAAPETALADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAM 189 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ FACE+GA++A + ++ RLR FGE +G+ FQLADD+LD D Sbjct: 190 KTGALIRFACEAGALIAASPPEDRRRLRAFGEKIGLAFQLADDILDLTSD 239 >gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella henselae str. Houston-1] gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella henselae str. Houston-1] Length = 300 Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 107/220 (48%), Positives = 149/220 (67%), Gaps = 7/220 (3%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 KR+ T+L D + + + + LL A+RY +L GGK++R FLV + +LF++ + Sbjct: 17 KRLATLLSDQV----QNGEIARPEILLKAMRYGVLNGGKRLRPFLVIQSCALFDIPIEYS 72 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L V +A+ECIHCYSLIHDDLP+MDN +RRG+PTVHI +DE TAI+AGN LLT+AFEII+ Sbjct: 73 LNVASALECIHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNALLTFAFEIIA 132 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190 ++L R +L+ +L GL GM+GGQMLD++ E + + +Q MKT L+ Sbjct: 133 HKTSELSFETRIRLITALAQASGLGGMIGGQMLDLEAEKKPQESKDITTLQHMKTATLIS 192 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 FAC++GAI+ +ASQ E+L FG LG+ FQL DDLLD Sbjct: 193 FACQAGAIIGNASQELTEKLAAFGTYLGLAFQLTDDLLDV 232 >gi|319407760|emb|CBI81407.1| geranyltranstransferase [Bartonella sp. 1-1C] Length = 300 Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 154/224 (68%), Gaps = 3/224 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L ++++ ++ LD LL A + + + L++A+R+ +L GGK++R FLV + A+LF++ Sbjct: 8 LAKHAQNVEKRLDMLLSHKAQNDEIIRPEMLINAMRHGVLNGGKRLRPFLVIQSAALFDI 67 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +L +G A+ECIHCYSLIHDDLP++DN +RRG+PTVHI +DE TAI+AGN LLT+A Sbjct: 68 PPEDSLDIGVALECIHCYSLIHDDLPALDNDTLRRGQPTVHIAFDEATAILAGNALLTFA 127 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185 FEII+ + +L+ +LT GL GM+GGQ+LD++ E +E +Q+MKT Sbjct: 128 FEIIAHKTCSFSPKTKIELITALTQAAGLGGMIGGQLLDLEAEKKPHNENATTTLQQMKT 187 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AL+ FAC++GAIM AS+ +L FG ++G+ FQL DDLLD Sbjct: 188 AALIRFACQAGAIMGRASKTLTHQLASFGTHIGLAFQLTDDLLD 231 >gi|241206841|ref|YP_002977937.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860731|gb|ACS58398.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 304 Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 117/230 (50%), Positives = 164/230 (71%), Gaps = 3/230 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++L+ N++ I+ +LD LL +A + + L A+ YA+L GGK++R FLV E A+L Sbjct: 10 TRLKNNARDIEALLDALLSPSALSDEIARPETLRDAMHYAVLNGGKRLRPFLVVESAALL 69 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + ALRVGAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TAI+AG+ LLT Sbjct: 70 GGDAEAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGDSLLT 129 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 YAF+II++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + +Q M Sbjct: 130 YAFDIIAAPETTLADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAM 189 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ FACE+GA++A + ++ RLR FGE +G+ FQLADD+LD D Sbjct: 190 KTGALIRFACEAGAVIAASRPEDRRRLRAFGEKIGLAFQLADDILDLTSD 239 >gi|288961625|ref|YP_003451935.1| geranyltranstransferase [Azospirillum sp. B510] gi|288913905|dbj|BAI75391.1| geranyltranstransferase [Azospirillum sp. B510] Length = 300 Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 96/197 (48%), Positives = 136/197 (69%), Gaps = 3/197 (1%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 R+ A+RY L GGK++R FLV + ++LF VN A+R AA+E +H YSL+HDDLP+MD Sbjct: 37 RVFEAMRYGCLNGGKRLRPFLVMQSSALFGVNPDCAIRAAAAVEMVHSYSLVHDDLPAMD 96 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 +G +RRG+PT H Q+DE TAI+AG+GLLT AFE+++ P T NIR QL+ +L G Sbjct: 97 DGELRRGRPTCHRQFDEATAILAGDGLLTLAFEVLADPATHEDPNIRCQLVTALAKAAGG 156 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQMLD+ + E D +Q++KTG ++ F+CE+G I+ AS ++ LR + Sbjct: 157 HGMVGGQMLDLIAEHETFDLGTTTRLQRLKTGEMIAFSCEAGGILGKASPPQRTALRAYA 216 Query: 215 ENLGIIFQLADDLLDCE 231 +LG+ FQ+ DDLLD E Sbjct: 217 HDLGLAFQIVDDLLDVE 233 >gi|121601917|ref|YP_988458.1| polyprenyl synthetase [Bartonella bacilliformis KC583] gi|120614094|gb|ABM44695.1| polyprenyl synthetase [Bartonella bacilliformis KC583] Length = 300 Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 109/223 (48%), Positives = 147/223 (65%), Gaps = 6/223 (2%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 +K D + L + +H+Q R LL A+RY +L GGK +R F V + A+LF+V Sbjct: 9 AKHADAVKQRLNMLLNNHVQEGEIARPELLLQAMRYGVLNGGKCLRPFFVIQSAALFDVP 68 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AL VG A+ECIHCYSLIHDDLP+MDN +RRGKPTVH +DE TAI+AGN LLT+AF Sbjct: 69 PEHALDVGVALECIHCYSLIHDDLPAMDNDILRRGKPTVHKAFDEATAILAGNALLTFAF 128 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTG 186 EII+ L R L+ +L GL GM+GGQ+LD++ E D T++ +Q+MKT Sbjct: 129 EIIAHKACALLPQTRLNLITALAQAAGLGGMIGGQILDLEAEKKPQDRTKILTLQRMKTA 188 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AL+ F+C++GAIM +AS + ++ FG +G+ FQL DDLLD Sbjct: 189 ALISFSCQAGAIMGNASASITQQFADFGTQIGLAFQLTDDLLD 231 >gi|239832857|ref|ZP_04681186.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] gi|239825124|gb|EEQ96692.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] Length = 316 Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 113/221 (51%), Positives = 151/221 (68%), Gaps = 3/221 (1%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 ++ L LL Q + +RLL+A+R+ +L GGK++R FLV E A+LF LR Sbjct: 31 VEMALTGLLDQRLRTGEIARPERLLAAMRHGVLNGGKRLRPFLVVESAALFGKGGDAVLR 90 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYAF+I+SS Sbjct: 91 VAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIVSSD 150 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +T L IR +L+ +L GL GM GGQ LD+ E DE + +Q MKTGAL+ FA Sbjct: 151 ETDLDPAIRVRLVSALARASGLGGMAGGQALDLMAETSKPDEAGIITLQAMKTGALIRFA 210 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 CE+GAI+A+AS ++ER+ FG +G+ FQLADDLLD D Sbjct: 211 CEAGAIIANASTEDRERMAEFGSAIGLAFQLADDLLDVTAD 251 >gi|116254354|ref|YP_770192.1| geranyltranstransferase [Rhizobium leguminosarum bv. viciae 3841] gi|115259002|emb|CAK10111.1| putative geranyltranstransferase [Rhizobium leguminosarum bv. viciae 3841] Length = 304 Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 116/230 (50%), Positives = 164/230 (71%), Gaps = 3/230 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++L+ N++ I+ +LD LL +A + + L A+ YA+L GGK++R FLV E A+L Sbjct: 10 TRLKNNARDIEALLDALLSPSAFSDEIARPETLRDAMHYAVLNGGKRLRPFLVVESAALL 69 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + ALRVGAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TAI+AG+ LLT Sbjct: 70 GGDAEAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGDSLLT 129 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 YAF+II++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + +Q M Sbjct: 130 YAFDIIAAPETTLADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAM 189 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ FACE+GA+++ + ++ RLR FGE +G+ FQLADD+LD D Sbjct: 190 KTGALIRFACEAGAVISGSLAEDRRRLRAFGEKIGLAFQLADDILDLTSD 239 >gi|92116242|ref|YP_575971.1| polyprenyl synthetase [Nitrobacter hamburgensis X14] gi|91799136|gb|ABE61511.1| farnesyl-diphosphate synthase [Nitrobacter hamburgensis X14] Length = 308 Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 112/243 (46%), Positives = 151/243 (62%), Gaps = 10/243 (4%) Query: 1 MNGGLPS-----KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIR 54 M GL S +L + +T+L LL + RL+ A+RY+ LGG K++R Sbjct: 1 MTSGLSSADFVKRLDTTADETETLLGTLLSDAVLPDEIARPKRLMDAMRYSSLGGGKRLR 60 Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 FLV E +++F V +AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H D+ Sbjct: 61 PFLVVESSAVFGVPRDSALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTADDA 120 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FI 172 TAI+AG+GLLT AF+II+ + +R L +L G+ GM+GGQMLD+ E F Sbjct: 121 TAILAGDGLLTLAFDIITRDEVHQDPAVRLLLTRALARAAGIGGMVGGQMLDLAGEGRFG 180 Query: 173 DE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 D V +Q+MKTGAL+ F C SGA++ ASQ + + L +G LG FQ+ADDLLD Sbjct: 181 DREPVDVARLQQMKTGALLRFGCISGALLGQASQKDYQALDAYGRALGEAFQIADDLLDV 240 Query: 231 EED 233 E D Sbjct: 241 EGD 243 >gi|222087742|ref|YP_002546279.1| geranyltranstransferase protein [Agrobacterium radiobacter K84] gi|221725190|gb|ACM28346.1| geranyltranstransferase protein [Agrobacterium radiobacter K84] Length = 304 Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 116/228 (50%), Positives = 164/228 (71%), Gaps = 3/228 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L++N+ +++ +L LL + + RLL A+R+ +L GGK++R FLV E A+L Sbjct: 12 LRDNAGKVEAVLSRLLADARLNDEIARPARLLEAMRHGVLNGGKRLRPFLVMETAALLGG 71 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVHI +D TAI+AG+ LLTYA Sbjct: 72 NADAALRIGAALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDYATAILAGDSLLTYA 131 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185 F+II++P+T L + + +L+L+L+ G+ GM GGQ LD+ E + DE + +Q MKT Sbjct: 132 FDIIAAPETDLPADRKMELVLALSRAAGIGGMAGGQALDLAAEKVTPDEQGITTLQAMKT 191 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ FACE+GAIMA AS +++RLR FGE +G+ FQLADDLLD D Sbjct: 192 GALIRFACEAGAIMAGASAGDRQRLRSFGEKIGLAFQLADDLLDLTAD 239 >gi|23502633|ref|NP_698760.1| geranyltranstransferase [Brucella suis 1330] gi|161619701|ref|YP_001593588.1| polyprenyl synthetase [Brucella canis ATCC 23365] gi|254703547|ref|ZP_05165375.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] gi|260568852|ref|ZP_05839320.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261754180|ref|ZP_05997889.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] gi|23348639|gb|AAN30675.1| geranyltranstransferase [Brucella suis 1330] gi|161336512|gb|ABX62817.1| Polyprenyl synthetase [Brucella canis ATCC 23365] gi|260154236|gb|EEW89318.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261743933|gb|EEY31859.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] Length = 304 Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 113/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + ++ L LL + + RL++A+R+ +L GGK++R FLV E A+LF Sbjct: 12 LNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYA Sbjct: 72 YGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYA 131 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKT Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEASIITLQAMKT 191 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 192 GALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 239 >gi|150398316|ref|YP_001328783.1| polyprenyl synthetase [Sinorhizobium medicae WSM419] gi|150029831|gb|ABR61948.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419] Length = 304 Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 117/232 (50%), Positives = 165/232 (71%), Gaps = 3/232 (1%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 P +L+ N+ ++ +L+ LL + LL A+R+A+L GGK++R FLV+E A+ Sbjct: 8 FPERLKSNAVAVEALLETLLDPAVRGGEISRPANLLEAMRHAVLNGGKRLRPFLVSETAA 67 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + ALR+GAA+ECIHCYSL+HDDLP+MDN +RRGKPTVH+ +DE TAI+AG+ L Sbjct: 68 LLGGDVQAALRIGAALECIHCYSLVHDDLPAMDNDDMRRGKPTVHVAFDEATAILAGDSL 127 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 LT++F+II++P+T L D ++ L+L+L G GM GGQ LD+ E DET + ++Q Sbjct: 128 LTFSFDIIAAPETALSDRQKTALVLALARAAGHGGMAGGQALDLAAEKSAPDETGIVLLQ 187 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ FACE+GAI+A A+ +++RLR FGE +G+ FQLADDLLD D Sbjct: 188 SMKTGALLRFACEAGAIIADAAAEDRQRLRAFGEKIGLAFQLADDLLDLTAD 239 >gi|256114345|ref|ZP_05455078.1| Polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|265995644|ref|ZP_06108201.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|262766928|gb|EEZ12546.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] Length = 304 Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 113/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + ++ L LL + + RL++A+R+ +L GGK++R FLV E A+LF Sbjct: 12 LNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYA Sbjct: 72 YGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYA 131 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKT Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKT 191 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 192 GALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 239 >gi|17986554|ref|NP_539188.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] gi|62290646|ref|YP_222439.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941] gi|82700560|ref|YP_415134.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225628336|ref|ZP_03786370.1| geranyltranstransferase [Brucella ceti str. Cudo] gi|225853224|ref|YP_002733457.1| polyprenyl synthetase [Brucella melitensis ATCC 23457] gi|237816147|ref|ZP_04595142.1| geranyltranstransferase [Brucella abortus str. 2308 A] gi|254689934|ref|ZP_05153188.1| geranyltranstransferase [Brucella abortus bv. 6 str. 870] gi|254694426|ref|ZP_05156254.1| geranyltranstransferase [Brucella abortus bv. 3 str. Tulya] gi|254698085|ref|ZP_05159913.1| geranyltranstransferase [Brucella abortus bv. 2 str. 86/8/59] gi|254708366|ref|ZP_05170194.1| geranyltranstransferase [Brucella pinnipedialis M163/99/10] gi|254708781|ref|ZP_05170592.1| geranyltranstransferase [Brucella pinnipedialis B2/94] gi|254714624|ref|ZP_05176435.1| geranyltranstransferase [Brucella ceti M644/93/1] gi|254717522|ref|ZP_05179333.1| geranyltranstransferase [Brucella ceti M13/05/1] gi|254730969|ref|ZP_05189547.1| geranyltranstransferase [Brucella abortus bv. 4 str. 292] gi|256030307|ref|ZP_05443921.1| geranyltranstransferase [Brucella pinnipedialis M292/94/1] gi|256045376|ref|ZP_05448270.1| geranyltranstransferase [Brucella melitensis bv. 1 str. Rev.1] gi|256061806|ref|ZP_05451941.1| geranyltranstransferase [Brucella neotomae 5K33] gi|256160480|ref|ZP_05458169.1| geranyltranstransferase [Brucella ceti M490/95/1] gi|256255686|ref|ZP_05461222.1| geranyltranstransferase [Brucella ceti B1/94] gi|256258189|ref|ZP_05463725.1| geranyltranstransferase [Brucella abortus bv. 9 str. C68] gi|256263286|ref|ZP_05465818.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|256370183|ref|YP_003107694.1| geranyltranstransferase [Brucella microti CCM 4915] gi|260167981|ref|ZP_05754792.1| geranyltranstransferase [Brucella sp. F5/99] gi|260547118|ref|ZP_05822856.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260565731|ref|ZP_05836214.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260755469|ref|ZP_05867817.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260758692|ref|ZP_05871040.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260762526|ref|ZP_05874863.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260884489|ref|ZP_05896103.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|261214740|ref|ZP_05929021.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|261219357|ref|ZP_05933638.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261222894|ref|ZP_05937175.1| polyprenyl synthetase [Brucella ceti B1/94] gi|261315865|ref|ZP_05955062.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261316274|ref|ZP_05955471.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261322419|ref|ZP_05961616.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261325809|ref|ZP_05965006.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261757424|ref|ZP_06001133.1| polyprenyl synthetase [Brucella sp. F5/99] gi|265987340|ref|ZP_06099897.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|265991805|ref|ZP_06104362.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265998853|ref|ZP_06111410.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|294851019|ref|ZP_06791695.1| geranyltranstransferase [Brucella sp. NVSL 07-0026] gi|297249039|ref|ZP_06932747.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196] gi|17982161|gb|AAL51452.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] gi|62196778|gb|AAX75078.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941] gi|82616661|emb|CAJ11743.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225616182|gb|EEH13230.1| geranyltranstransferase [Brucella ceti str. Cudo] gi|225641589|gb|ACO01503.1| Polyprenyl synthetase [Brucella melitensis ATCC 23457] gi|237788609|gb|EEP62822.1| geranyltranstransferase [Brucella abortus str. 2308 A] gi|256000346|gb|ACU48745.1| geranyltranstransferase [Brucella microti CCM 4915] gi|260095483|gb|EEW79361.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260151104|gb|EEW86199.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260669010|gb|EEX55950.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260672952|gb|EEX59773.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260675577|gb|EEX62398.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260874017|gb|EEX81086.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|260916347|gb|EEX83208.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|260921478|gb|EEX88131.1| polyprenyl synthetase [Brucella ceti B1/94] gi|260924446|gb|EEX91014.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261295109|gb|EEX98605.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261295497|gb|EEX98993.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261301789|gb|EEY05286.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261304891|gb|EEY08388.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261737408|gb|EEY25404.1| polyprenyl synthetase [Brucella sp. F5/99] gi|262553542|gb|EEZ09311.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|263002761|gb|EEZ15164.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263093252|gb|EEZ17349.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|264659537|gb|EEZ29798.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|294821662|gb|EFG38658.1| geranyltranstransferase [Brucella sp. NVSL 07-0026] gi|297174172|gb|EFH33529.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196] gi|326409783|gb|ADZ66848.1| polyprenyl synthetase [Brucella melitensis M28] gi|326539499|gb|ADZ87714.1| polyprenyl synthetase [Brucella melitensis M5-90] Length = 304 Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 113/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + ++ L LL + + RL++A+R+ +L GGK++R FLV E A+LF Sbjct: 12 LNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYA Sbjct: 72 YGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYA 131 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKT Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKT 191 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 192 GALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 239 >gi|148560740|ref|YP_001259620.1| geranyltranstransferase [Brucella ovis ATCC 25840] gi|148371997|gb|ABQ61976.1| geranyltranstransferase [Brucella ovis ATCC 25840] Length = 304 Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 113/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + ++ L LL + + RL++A+R+ +L GGK++R FLV E A+LF Sbjct: 12 LNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYA Sbjct: 72 YGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYA 131 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKT Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKT 191 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 192 GALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 239 >gi|163845354|ref|YP_001623009.1| hypothetical protein BSUIS_B1253 [Brucella suis ATCC 23445] gi|163676077|gb|ABY40187.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 304 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 113/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + ++ L LL + + RL++A+R+ +L GGK++R FLV E A+LF Sbjct: 12 LNRRAMEVEAALAGLLDECPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYA Sbjct: 72 YGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYA 131 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKT Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKT 191 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 192 GALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 239 >gi|254700427|ref|ZP_05162255.1| geranyltranstransferase [Brucella suis bv. 5 str. 513] gi|261750926|ref|ZP_05994635.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] gi|261740679|gb|EEY28605.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] Length = 304 Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 112/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + ++ L L+ + + RL++A+R+ +L GGK++R FLV E A+LF Sbjct: 12 LNRRAMEVEAALAGLMDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYA Sbjct: 72 YGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYA 131 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKT Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKT 191 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 192 GALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 239 >gi|189024858|ref|YP_001935626.1| polyprenyl synthetase [Brucella abortus S19] gi|189020430|gb|ACD73152.1| Polyprenyl synthetase [Brucella abortus S19] Length = 288 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 112/221 (50%), Positives = 151/221 (68%), Gaps = 3/221 (1%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 ++ L LL + + RL++A+R+ +L GGK++R FLV E A+LF LR Sbjct: 3 VEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLR 62 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYAF+II+S Sbjct: 63 VAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIASD 122 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKTGAL+ FA Sbjct: 123 ETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRFA 182 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 CE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 183 CEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 223 >gi|254719767|ref|ZP_05181578.1| Polyprenyl synthetase [Brucella sp. 83/13] gi|265984787|ref|ZP_06097522.1| polyprenyl synthetase [Brucella sp. 83/13] gi|264663379|gb|EEZ33640.1| polyprenyl synthetase [Brucella sp. 83/13] Length = 304 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 112/228 (49%), Positives = 154/228 (67%), Gaps = 3/228 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + ++ L LL + + RL++A+R+ +L GGK++R FLV E A+LF Sbjct: 12 LNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYA Sbjct: 72 HGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYA 131 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKT Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKT 191 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ FACE+GAI+A AS+ ++ER+ FG +G+ FQLADDLLD D Sbjct: 192 GALIRFACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTAD 239 >gi|306844758|ref|ZP_07477343.1| geranyltranstransferase [Brucella sp. BO1] gi|306274930|gb|EFM56700.1| geranyltranstransferase [Brucella sp. BO1] Length = 288 Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 111/221 (50%), Positives = 152/221 (68%), Gaps = 3/221 (1%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 ++ L LL + + RL++A+R+ +L GGK++R FLV E A+LF + LR Sbjct: 3 VEAALASLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVLR 62 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYAF+II+S Sbjct: 63 VAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIASD 122 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKTGAL+ FA Sbjct: 123 ETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRFA 182 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 CE+GAI+A AS+ ++ER+ FG +G+ FQLADDLLD D Sbjct: 183 CEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTAD 223 >gi|306839463|ref|ZP_07472271.1| geranyltranstransferase [Brucella sp. NF 2653] gi|306405408|gb|EFM61679.1| geranyltranstransferase [Brucella sp. NF 2653] Length = 288 Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 111/221 (50%), Positives = 152/221 (68%), Gaps = 3/221 (1%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 ++ L LL + + RL++A+R+ +L GGK++R FLV E A+LF + LR Sbjct: 3 VEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVLR 62 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYAF+II+S Sbjct: 63 VAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYAFDIIASD 122 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKTGAL+ FA Sbjct: 123 ETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRFA 182 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 CE+GAI+A AS+ ++ER+ FG +G+ FQLADDLLD D Sbjct: 183 CEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTAD 223 >gi|15967020|ref|NP_387373.1| geranyltranstransferase protein [Sinorhizobium meliloti 1021] gi|307302488|ref|ZP_07582245.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C] gi|307316182|ref|ZP_07595626.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83] gi|15076293|emb|CAC47846.1| Probable geranyltranstransferase [Sinorhizobium meliloti 1021] gi|306898022|gb|EFN28764.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83] gi|306903158|gb|EFN33748.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C] Length = 304 Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 112/232 (48%), Positives = 159/232 (68%), Gaps = 3/232 (1%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 P++L+ N+ ++ +L+ LL + LL A+R+ +L GGK++R FLV E + Sbjct: 8 FPARLKTNAVAVEALLETLLGPAVGTGEIARPANLLGAMRHGVLNGGKRLRPFLVAESTA 67 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + ALR GAA+ECIHCYSL+HDDLP+MD+ +RRGKPTVH+ +DE TAI+AG+ L Sbjct: 68 LLGGDAEAALRTGAALECIHCYSLVHDDLPAMDDDDMRRGKPTVHVAFDEATAILAGDSL 127 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 LT+AF+I+++P+T L D ++ L+L+L G GM GGQ LD+ E DE + ++Q Sbjct: 128 LTFAFDIVAAPETALSDRQKTTLVLALARAAGHGGMAGGQALDLAAEKSAPDEAGIVLLQ 187 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ FACE+GAI+A A ++ RLR FG+ +G+ FQLADDLLD D Sbjct: 188 SMKTGALIRFACEAGAIIADAPAEDRRRLRAFGDKIGLAFQLADDLLDLTAD 239 >gi|91974793|ref|YP_567452.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5] gi|91681249|gb|ABE37551.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5] Length = 321 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 110/233 (47%), Positives = 144/233 (61%), Gaps = 12/233 (5%) Query: 13 SKRIDTILDD-------LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64 +KR+DT +D LL + RL+ AIRYA L GGK++R FL E A++ Sbjct: 24 AKRLDTTAEDTEALLGRLLSDDLLPDEITRPRRLMEAIRYATLGGGKRLRPFLAVESAAV 83 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F V +AL VGAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ TAI+AG+ LL Sbjct: 84 FGVERASALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAGDALL 143 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMI 180 T+AF+II+ + +R L L GL GM+GGQ+LD+ E F D V + Sbjct: 144 TFAFDIITRDEVHRDPQVRLDLNRVLARCAGLGGMVGGQILDLAGEGRFGDREPVDVARL 203 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 Q+MKTGAL+ + C +GAI+ A L +G LG FQ+ADDLLD E D Sbjct: 204 QQMKTGALLRYGCVAGAILGEAPPEHYRALDDYGRALGEAFQIADDLLDVEGD 256 >gi|86747642|ref|YP_484138.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2] gi|86570670|gb|ABD05227.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2] Length = 308 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 104/201 (51%), Positives = 134/201 (66%), Gaps = 5/201 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL+ AIRY+ LGG K++R FL E A++F V+ AL VGAA+ECIHCYSLIHDDLP+MD Sbjct: 43 RLMEAIRYSTLGGGKRLRPFLAVESAAVFGVDRAGALLVGAALECIHCYSLIHDDLPAMD 102 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PT+H YD+ TAI+AG+ LLT AF+II+ + +R L L GL Sbjct: 103 NSDLRRGRPTLHKAYDDATAILAGDALLTLAFDIITRDEVHQDAKVRLDLNRVLARCAGL 162 Query: 157 QGMLGGQMLDIQDE--FIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM+GGQMLD+ E F D V +Q+MKTGAL+ + C +GAI+ AS + L Sbjct: 163 GGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQASPEHYKALDD 222 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQ+ADDLLD E D Sbjct: 223 YGRALGEAFQIADDLLDVEGD 243 >gi|254513451|ref|ZP_05125516.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11] gi|221532455|gb|EEE35451.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11] Length = 301 Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 108/232 (46%), Positives = 145/232 (62%), Gaps = 3/232 (1%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L + + + RI+T LD LL + + RLL+A+R+ +L GGK++R LV Sbjct: 1 MTPDLKTHMAVQAIRIETRLDHLLGGSEFLESNKSPPRLLAAMRHGVLNGGKRLRPVLVL 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 ECA+L L V A+E IHCYSL+HDDLP+MDN +RRGKPTVH +DE T I+A Sbjct: 61 ECAALLGRCDEGVLDVACALELIHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATGILA 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177 G+ LLT AF++I IR QL L+ G+ GM GGQMLD+Q E D T ++ Sbjct: 121 GDALLTLAFDVIGQEAAHPDATIRLQLSRELSKASGVVGMAGGQMLDLQAEHCDRTEIEI 180 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + MKTGAL+ +AC +GAI+A AS + +RL FG +G+ FQ+ADDLLD Sbjct: 181 YKFHAMKTGALLRYACRAGAILADASNDNIDRLTRFGTTIGLSFQIADDLLD 232 >gi|316931945|ref|YP_004106927.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1] gi|315599659|gb|ADU42194.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1] Length = 308 Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 104/231 (45%), Positives = 145/231 (62%), Gaps = 5/231 (2%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 +L ++ + +L LL + RL+ AIRY+ LGG K++R FL E A++F Sbjct: 13 RLDSTAEDTEALLGRLLSDELMTDEIARPRRLMEAIRYSTLGGGKRLRPFLAVESAAVFG 72 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ AL VGAA+ECIHCYSLIHDDLP+MD+ +RRG+PT+H YD+ TAI+AG+ LLT+ Sbjct: 73 IDRDAALLVGAALECIHCYSLIHDDLPAMDDSDLRRGRPTLHKAYDDATAILAGDALLTF 132 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQK 182 AF+I++ + +R L L GL GM+GGQMLD+ E F D V +Q+ Sbjct: 133 AFDIVTRDEVHTDPTVRLMLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVAKLQQ 192 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ + C +GAI+ A+ + L +G LG FQ+ADDLLD E D Sbjct: 193 MKTGALLRYGCVAGAILGQANAEQYRALDDYGRALGEAFQIADDLLDVESD 243 >gi|146337687|ref|YP_001202735.1| putative geranyltranstransferase [Bradyrhizobium sp. ORS278] gi|146190493|emb|CAL74492.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Bradyrhizobium sp. ORS278] Length = 306 Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 104/231 (45%), Positives = 145/231 (62%), Gaps = 5/231 (2%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 +L + ++ + +L +LL + RL+ ++RY+ LGG K++R FLV E A++F Sbjct: 11 RLDKTAEETEALLGELLSDAPLADEIARPKRLIESMRYSSLGGGKRLRPFLVVESAAVFG 70 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ TAI+AG+ LLT Sbjct: 71 VPRRGALMAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDALLTI 130 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQK 182 AF+II+ + +R L +L G+ GM GGQ+LD+ E D V +Q+ Sbjct: 131 AFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDRDPVDVARVQQ 190 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ F C +GA++ AS E + L +G LG FQ+ADDLLD E D Sbjct: 191 MKTGALLRFGCIAGALLGQASAAEYKALDDYGRALGEAFQIADDLLDVEGD 241 >gi|218682196|ref|ZP_03529797.1| Polyprenyl synthetase [Rhizobium etli CIAT 894] Length = 304 Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 119/230 (51%), Positives = 164/230 (71%), Gaps = 3/230 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++L+ N+ I+ +LD LL + + L SA+ YA+L GGK++R FLV E A+LF Sbjct: 10 TRLKHNAHEIEALLDILLSPATLSDEIARPETLRSAMHYAVLNGGKRMRPFLVVESAALF 69 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + ALRVGAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TAI+AG+ LLT Sbjct: 70 GGDAGAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGDSLLT 129 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 YAF+II++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + +Q M Sbjct: 130 YAFDIIAAPETALPDTSKAALVLALARAAGLGGMAGGQALDLAAERQAPDEAGIIRLQAM 189 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ FACE+GAI++ S +++ RLR FGE +G+ FQLADD+LD D Sbjct: 190 KTGALIRFACEAGAIISAGSPDDRLRLRAFGEKIGLAFQLADDILDLTSD 239 >gi|148258788|ref|YP_001243373.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1] gi|146410961|gb|ABQ39467.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1] Length = 307 Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 105/231 (45%), Positives = 146/231 (63%), Gaps = 5/231 (2%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 +L + ++ + +L +LL + RL+ ++RY+ LGG K++R FLV E A++F Sbjct: 12 RLDKTAEETEALLGELLGDAPLADEIARPQRLIESMRYSSLGGGKRLRPFLVVESAAVFG 71 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ TAI+AG+ LLT Sbjct: 72 VPRKGALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDALLTI 131 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQK 182 AF+II+ + +R L +L G+ GM GGQ+LD+ E F D V +Q+ Sbjct: 132 AFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDSGPVDVARVQQ 191 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ F C +GA++ AS E + L +G LG FQ+ADDLLD E D Sbjct: 192 MKTGALLRFGCIAGALLGQASPAEYQALDDYGRALGEAFQIADDLLDVEGD 242 >gi|323137013|ref|ZP_08072093.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242] gi|322397774|gb|EFY00296.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242] Length = 310 Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 106/231 (45%), Positives = 149/231 (64%), Gaps = 5/231 (2%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66 +L + ++ + LD LL + RLL A+RY +L GGK++R FLV E A LF Sbjct: 13 RLDQAAEATEAALDSLLAPAPLADEITRPARLLEAMRYVSLGGGKRLRPFLVIESARLFG 72 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V +ALR A+E IHCYSL HDDLP+MD+ +RRG+PT H +DE TAI+AG+GLLTY Sbjct: 73 VEGASALRTACALEMIHCYSLAHDDLPAMDDDDLRRGRPTAHKAFDEATAILAGDGLLTY 132 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQK 182 AF++++ P T ++R L+L+L GL GM+GGQ LD+ E + + + +Q Sbjct: 133 AFDVVADPATHPDASLRVSLVLALARAAGLGGMVGGQALDLAAETAATPLSQAETMQMQA 192 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ FA ++G I+ A+ +K+ LR +GE LG FQ+ADD+LD E D Sbjct: 193 MKTGALLRFAVDAGGILGGAAPAQKKALRRYGEALGAAFQIADDILDAEGD 243 >gi|326387412|ref|ZP_08209021.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM 19370] gi|326208068|gb|EGD58876.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM 19370] Length = 305 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 142/235 (60%), Gaps = 13/235 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQT----------QHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 ++R D++L D L++ + RL A+RY A+ GGK++R LVT Sbjct: 6 TNQRPDSLLKDALVRIQQEVDACFDATLPVPEDPRARLYEAMRYSAIGGGKRLRPLLVTA 65 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 ASLF V+ A+RVG A+E IH YSLIHDD+P MDN +R GKPTVH+ YD+ TA++AG Sbjct: 66 VASLFGVDRSVAVRVGTALESIHVYSLIHDDMPCMDNDSLRHGKPTVHLAYDDATAVLAG 125 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + L AFEI+S P +R +L+ +L H G+ GM+GGQM+DI E D V Sbjct: 126 DALQALAFEILSDPDLVGDPFVRIELVRTLAHASGINGMVGGQMMDIAAETASFDLATVT 185 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +Q++KTGAL+ A E GAI+ H + LR + N+G+ FQ+ DDLLD E D Sbjct: 186 RLQQLKTGALLAAAVEMGAILGHVPPEGRTHLRGYARNIGLAFQIVDDLLDAEGD 240 >gi|312112938|ref|YP_004010534.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311218067|gb|ADP69435.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 296 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 109/229 (47%), Positives = 148/229 (64%), Gaps = 6/229 (2%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 +L++++ R++ LD+ L ++ DRLL A+RY LGG K+ R FLV E A+LF Sbjct: 6 RLEDHASRVERHLDEWL---STDKLGAVPDRLLDAMRYGTLGGGKRFRPFLVIESAALFG 62 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V AL G+A+ECIHCYSL+HDDLP+MDN +RRG+PTVH +D+ TAI+AG+ LLT Sbjct: 63 VPVEKALNAGSALECIHCYSLVHDDLPAMDNDDLRRGRPTVHKAFDDATAILAGDTLLTV 122 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 AFEII+ T +R+ L L L G GM GGQMLD+ + + E + +Q MK Sbjct: 123 AFEIIAHESTHPNPAVRAALGLELARASGGAGMAGGQMLDLMAPGKMLGEADIRTLQAMK 182 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TGAL+ + C +G I+ AS+ E L+ +G+ LG FQLADDLLD E D Sbjct: 183 TGALITYGCVAGGILGEASKAELAALKTYGDALGAAFQLADDLLDAEGD 231 >gi|220927127|ref|YP_002502429.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060] gi|219951734|gb|ACL62126.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060] Length = 337 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 97/234 (41%), Positives = 144/234 (61%), Gaps = 7/234 (2%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 P++L + ++ L++ L A + RL+ +R+A+LGG K++R FL E A Sbjct: 37 FPARLTAVADAVEGFLNERLGDAAGPGEITRPVRLMQGMRHAVLGGGKRLRPFLTIETAR 96 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + AL G+ IE +HCYSL+HDDLP+MDN +RRGKPTVH +DE TAI+ G+ L Sbjct: 97 MLGGPYAGALAAGSGIELVHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATAILVGDAL 156 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDETQV 177 LT+AFEI++ P Q +R++L+L L GL GM+GGQ+LD+ E +D Sbjct: 157 LTFAFEILADPVWQPDARVRAELVLGLARAAGLGGMVGGQLLDLGAEGRFGPANLDVDAT 216 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 +Q MKTGAL+ + ++GAI+ A +++ L +G LG FQ+ADD+LD E Sbjct: 217 LQLQAMKTGALLAVSVDAGAIVGGADPDQRAALLAYGRALGQAFQVADDILDRE 270 >gi|83593950|ref|YP_427702.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170] gi|83576864|gb|ABC23415.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170] Length = 305 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 99/203 (48%), Positives = 138/203 (67%), Gaps = 7/203 (3%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 R++ A+RYA L GGK++R FLV + A LF+V+ AL V AAIE IHCYSLIHDDLP+MD Sbjct: 38 RVVDAMRYAALEGGKRLRPFLVLQSAQLFSVSRACALNVAAAIEMIHCYSLIHDDLPAMD 97 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PTVH QYDE TAI+AG+ LLT AFE+I+ P T +R L+ L G Sbjct: 98 NDDLRRGRPTVHRQYDEPTAILAGDALLTKAFEVIALPGTHSDPAVRCDLVTELAIAAGA 157 Query: 157 QGMLGGQMLDIQ------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +GM+GGQM+D+ D +D + + ++KTG L+ F+ +GAI+ A +++++ L Sbjct: 158 KGMVGGQMIDLMAERGLIDGALDVPAITRMHQLKTGRLISFSSIAGAILGKAPRSQRQAL 217 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + +LG+ FQ+ADDLLD E D Sbjct: 218 FNYAHDLGLAFQIADDLLDVEGD 240 >gi|298292712|ref|YP_003694651.1| polyprenyl synthetase [Starkeya novella DSM 506] gi|296929223|gb|ADH90032.1| Polyprenyl synthetase [Starkeya novella DSM 506] Length = 305 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 101/206 (49%), Positives = 136/206 (66%), Gaps = 10/206 (4%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 +RL SA+R+ AL GGK++R FLV E A+LF V A+ AA+ECIHCYSL+HDDLP+ Sbjct: 33 GERLASAMRHGALAGGKRLRPFLVIESAALFGVPAAAAMPAAAALECIHCYSLVHDDLPA 92 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN +RRG+PTVH YDE TAI+AG+GLLT AFEI++ + +R L+ SL H Sbjct: 93 MDNDDLRRGQPTVHRAYDEATAILAGDGLLTLAFEILAREEAGPDAEVRIALVASLAHAA 152 Query: 155 GLQGMLGGQMLDIQDEF---------IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 G+ GM+GGQMLD+ E + ++ +Q MKTGAL+ ACE+GA++ A+ Sbjct: 153 GVAGMIGGQMLDLAAEGRFASGRPLDLPAEEIIRLQAMKTGALLRQACEAGALVGRATPE 212 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 E+ L + +G FQ+ADDLLD E Sbjct: 213 ERASLDRYARAVGRAFQIADDLLDVE 238 >gi|209963898|ref|YP_002296813.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW] gi|209957364|gb|ACI98000.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW] Length = 296 Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 98/197 (49%), Positives = 137/197 (69%), Gaps = 3/197 (1%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RY LGG K++R FLV E A LF VN ALR AA+E IHCYSL+HDDLP+MD Sbjct: 33 RLFEAMRYGCLGGGKRLRPFLVMESARLFGVNPACALRAAAAVEFIHCYSLVHDDLPAMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PT+H++YDE TAI+AG+ LLT AFEI++ P+T +R +L+ +L G Sbjct: 93 DSDLRRGRPTLHLEYDEATAILAGDALLTVAFEILADPETHEDAQVRCRLVSALAKAAGP 152 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM+GGQMLD+ +D D + +Q++KTG L+ F+ +GAI+ AS + L+ + Sbjct: 153 RGMVGGQMLDLMAEDRTFDIGAITRLQRLKTGELIAFSATAGAILGRASPPQHHALQAYA 212 Query: 215 ENLGIIFQLADDLLDCE 231 +LG+ FQ+ADDLLD E Sbjct: 213 HDLGLAFQIADDLLDVE 229 >gi|240851259|ref|YP_002972662.1| geranyltranstransferase [Bartonella grahamii as4aup] gi|240268382|gb|ACS51970.1| geranyltranstransferase [Bartonella grahamii as4aup] Length = 300 Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 153/220 (69%), Gaps = 7/220 (3%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 KR+DT+L D + + + L+ A+RY +L GGK++R FLV + A+LF++ + Sbjct: 17 KRLDTLLSDQI----QNGEISRPKNLIKAMRYGVLNGGKRLRPFLVIQSAALFDIPVEYS 72 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L V A+ECIHCYSLIHDDLP+MDN +RRGKPTVHI +DE TAI+AGN LLT+AFEII+ Sbjct: 73 LDVACALECIHCYSLIHDDLPAMDNDILRRGKPTVHIAFDEATAILAGNALLTFAFEIIA 132 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMC 190 + L +IR +L+ SL + GL GMLGGQMLD++ E + + + +Q MKT AL+ Sbjct: 133 HKASTLSTDIRIKLITSLAQSAGLGGMLGGQMLDLEAEKKPQGSSDIITLQHMKTAALIS 192 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 FAC++GAI+ +AS+ E+L FG LG+ FQL DDLLD Sbjct: 193 FACQAGAIIGNASKELTEKLTDFGTYLGLAFQLTDDLLDV 232 >gi|227823787|ref|YP_002827760.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii NGR234] gi|227342789|gb|ACP27007.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii NGR234] Length = 360 Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 113/232 (48%), Positives = 162/232 (69%), Gaps = 3/232 (1%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 P +L+ + ++++L +LL +A + +LL A+R+ +L GGK++R FLV E + Sbjct: 64 FPERLKAAALAVESLLSNLLGPSAQADEIARPAQLLDAMRHGVLNGGKRLRPFLVAESTA 123 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 124 LLGGSADAALRIGAALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDSL 183 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181 LT+AF+I+++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + +Q Sbjct: 184 LTFAFDIVAAPETPLSDGQKTALVLALARAAGLGGMAGGQALDLAAEKTAPDEAAIVTLQ 243 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ FACE+GAI+A A ++ RLR FGE +G+ FQLADDLLD D Sbjct: 244 AMKTGALIRFACEAGAIIADAGLEDRRRLRAFGEKIGLAFQLADDLLDLTAD 295 >gi|217977003|ref|YP_002361150.1| Polyprenyl synthetase [Methylocella silvestris BL2] gi|217502379|gb|ACK49788.1| Polyprenyl synthetase [Methylocella silvestris BL2] Length = 309 Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 103/231 (44%), Positives = 144/231 (62%), Gaps = 5/231 (2%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 +L+ + ++T+LD LL + + RLL AIRY+ LGG K++R FL+ E A LF Sbjct: 12 RLKTAADAVETMLDRLLGPSPLAGEIARPGRLLEAIRYSSLGGGKRLRPFLLIETARLFG 71 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V R AA+E IHCYSL+HDDLP++DN +RRG+ T H YDE TAI+ G+GLLTY Sbjct: 72 VEGEGVTRAAAAVEMIHCYSLVHDDLPALDNDDLRRGRATTHKAYDEATAILVGDGLLTY 131 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ----VFMIQK 182 AF++++ P T IR++L+L+L G GM+GGQ+LD++ E V +Q Sbjct: 132 AFDVLADPATHADPAIRAELVLALARAAGFGGMIGGQVLDLEAEQSTAPHTAEAVIRLQS 191 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ F+ +GAI+ A + L +G LG FQ+ADD+LD E D Sbjct: 192 MKTGALLHFSVLAGAIIGAADAKARAALSAYGHALGAAFQVADDILDVEAD 242 >gi|163869177|ref|YP_001610429.1| geranyltranstransferase [Bartonella tribocorum CIP 105476] gi|161018876|emb|CAK02434.1| geranyltranstransferase [Bartonella tribocorum CIP 105476] Length = 301 Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 110/222 (49%), Positives = 151/222 (68%), Gaps = 13/222 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 R+ T+L D H+Q R L+ A+RY +L GGK++R FLV + A+LF++ Sbjct: 18 RLSTLLSD-------HIQNGEISRPENLIKAMRYGVLNGGKRLRPFLVIQSAALFDIPVE 70 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 +L V A+EC+HCYSLIHDDLP+MDN +RRGKPTVH+++DE TAI+AGN LLT+AFEI Sbjct: 71 HSLDVACALECVHCYSLIHDDLPAMDNDILRRGKPTVHVEFDEATAILAGNALLTFAFEI 130 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGAL 188 I+ L + R +L+ +L + GL GMLGGQMLD++ E + T + +Q+MKT AL Sbjct: 131 IAHKANTLSTDTRIKLITALAQSAGLGGMLGGQMLDLEAEKKPQENTDIITLQRMKTAAL 190 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + FAC++GAI+ +ASQ +L FG LG+ FQL DDLLD Sbjct: 191 ISFACQAGAIIGNASQELLTKLTAFGSYLGLAFQLTDDLLDV 232 >gi|85713667|ref|ZP_01044657.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] gi|85699571|gb|EAQ37438.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] Length = 308 Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 109/243 (44%), Positives = 150/243 (61%), Gaps = 10/243 (4%) Query: 1 MNGGLPS-----KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIR 54 M GL S +L + + +L+ LL + RL+ A+RY+ LGG K++R Sbjct: 1 MTSGLSSADFAKRLDSTADETEALLEKLLSDAPLPDEIARPKRLMDAMRYSSLGGGKRLR 60 Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 FLV E +++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H D+ Sbjct: 61 PFLVVESSAVFGVAREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDA 120 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FI 172 TAI+AG+GLLT AF+II+ + +R L +L G+ GM+GGQ+LD+ E F Sbjct: 121 TAILAGDGLLTLAFDIITRDEVHQDPTVRLLLTRALARAAGIGGMVGGQLLDLAGEGRFG 180 Query: 173 DE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 D V +Q+MKTGAL+ F C +GA++ ASQ + + L +G LG FQ+ADDLLD Sbjct: 181 DRGPVDVARVQQMKTGALLRFGCIAGALLGQASQEDYQALDTYGRALGEAFQIADDLLDV 240 Query: 231 EED 233 E D Sbjct: 241 EGD 243 >gi|90422021|ref|YP_530391.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18] gi|90104035|gb|ABD86072.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18] Length = 308 Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 103/201 (51%), Positives = 136/201 (67%), Gaps = 5/201 (2%) Query: 38 RLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL+ AIRY+ L GGK++R FLV E A++F V AL GAA+ECIHCYSLIHDDLP+MD Sbjct: 43 RLMEAIRYSSLAGGKRLRPFLVVESAAVFGVPRGAALLAGAALECIHCYSLIHDDLPAMD 102 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PT+H YD+ TAI+AG+ LLT AF+II+ + +R L +L G+ Sbjct: 103 NSELRRGRPTLHRAYDDATAILAGDALLTLAFDIITRDEIHSDAGVRLALTRALARASGI 162 Query: 157 QGMLGGQMLDIQDE--FIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM+GGQMLD+ E F D V +Q+MKTGAL+ F C +GAI+ A++ + + L Sbjct: 163 GGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRFGCIAGAILGQATKEQTKALDD 222 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQ+ADDLLD E D Sbjct: 223 YGRALGEAFQIADDLLDVEGD 243 >gi|115522205|ref|YP_779116.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53] gi|115516152|gb|ABJ04136.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53] Length = 308 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 106/201 (52%), Positives = 136/201 (67%), Gaps = 5/201 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL+ AIRY+ LGG K++R FLV E A++F V AL VGAA+ECIHCYSLIHDDLPSMD Sbjct: 43 RLMEAIRYSTLGGGKRLRPFLVVESAAVFGVPRAAALLVGAALECIHCYSLIHDDLPSMD 102 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PT+H YD+ TAI+AG+ LLT AF+IIS + +R L +L G+ Sbjct: 103 NSDLRRGRPTLHKAYDDATAILAGDALLTLAFDIISRDEIHPDAKVRLLLTRALARASGI 162 Query: 157 QGMLGGQMLDIQDE--FIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM+GGQMLD+ E F D V +Q+MKTGAL+ F C +GA++ AS + + L Sbjct: 163 GGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRFGCIAGALLGQASPQQYQALDD 222 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQ+ADDLLD E D Sbjct: 223 YGRALGEAFQIADDLLDVEGD 243 >gi|296533686|ref|ZP_06896240.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957] gi|296265985|gb|EFH12056.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957] Length = 300 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 101/237 (42%), Positives = 147/237 (62%), Gaps = 12/237 (5%) Query: 1 MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57 M G P + L+E + I+ LD LL Q + +L +A+RY++LGG K++R FL Sbjct: 1 MTGDTPLSAALREAAAEIEHTLDMLLPQ-----EEGPEAKLYAAMRYSVLGGGKRMRGFL 55 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V E A+ F V+ ++ALRV AAIE +H YSL+HDDLP+MDN +RRGKPT H Y E TAI Sbjct: 56 VLEGAAQFGVSRVSALRVAAAIEMLHAYSLVHDDLPAMDNDELRRGKPTTHRAYGEATAI 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFID 173 +AG+ L +AF +++ T +R++L L L G +GM GGQMLD+ E + Sbjct: 116 LAGDALQAHAFAVLAGEDTHSDPAVRAELCLRLALAAGSKGMCGGQMLDMLAEEATEALS 175 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 E+ + +Q +KTG L+ F+ E+GA++ A ++ L +G LG FQ+ADD+LD Sbjct: 176 ESAIGRLQLLKTGKLIEFSAEAGAVLGKAPGPQRHALCAYGRELGAAFQIADDILDA 232 >gi|39933601|ref|NP_945877.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009] gi|39647447|emb|CAE25968.1| putative geranyltranstransferase (farnesyl-diphosphate synthase) [Rhodopseudomonas palustris CGA009] Length = 308 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 107/231 (46%), Positives = 146/231 (63%), Gaps = 5/231 (2%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 +L ++ + +L LL + RL+ AIRY+ LGG K++R FL E A++F Sbjct: 13 RLDTTAEETEALLGRLLSDELMSDEIARPRRLMDAIRYSTLGGGKRLRPFLAVESAAVFG 72 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ AL VGAA+ECIHCYSLIHDDLPSMDN +RRG+PT+H YD+ TAI+AG+ LLT+ Sbjct: 73 IDRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDALLTF 132 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQK 182 AF+I++ + +R L L GL GM+GGQMLD+ E F D V +Q+ Sbjct: 133 AFDIVTRDEVHNDPTVRLLLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQ 192 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ + C +GAI+ AS ++ L +G LG FQ+ADDLLD E D Sbjct: 193 MKTGALLRYGCVAGAILGQASPDQYRALDDYGRALGEAFQIADDLLDVEGD 243 >gi|110635757|ref|YP_675965.1| farnesyl-diphosphate synthase [Mesorhizobium sp. BNC1] gi|110286741|gb|ABG64800.1| farnesyl-diphosphate synthase [Chelativorans sp. BNC1] Length = 305 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 156/226 (69%), Gaps = 3/226 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S L N++ ++ +L LL + + LL+A+R+ +L GGK++R FLV E A+LF Sbjct: 11 SLLALNAQSVEDLLRHLLDERVREGEILRPSHLLAAMRHGVLNGGKRLRPFLVLESAALF 70 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +LRV AA+EC+HCYSLIHDDLP+MD+ +RRG+PTVH +DE TAI+AG+ LLT Sbjct: 71 EAQGMASLRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHRAFDEATAILAGDSLLT 130 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKM 183 YAF+II+ +T L+ IR+ L++ L G+ GM GGQ LD+ E + DE + +Q M Sbjct: 131 YAFDIIADAETDLRPEIRADLVVKLATAAGMGGMAGGQALDLLAEKVPPDEVGIVQLQAM 190 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL FACE+GAI+A AS ++ER+ FG +G+ FQLADDLLD Sbjct: 191 KTGALFRFACEAGAIVADASSADRERMSSFGAAIGLAFQLADDLLD 236 >gi|192288955|ref|YP_001989560.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] gi|192282704|gb|ACE99084.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] Length = 308 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 107/231 (46%), Positives = 146/231 (63%), Gaps = 5/231 (2%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 +L ++ + +L LL + RL+ AIRY+ LGG K++R FL E A++F Sbjct: 13 RLDTTAEETEALLGRLLSDELMSDEIARPRRLMDAIRYSTLGGGKRLRPFLAVESAAVFG 72 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ AL VGAA+ECIHCYSLIHDDLPSMDN +RRG+PT+H YD+ TAI+AG+ LLT+ Sbjct: 73 IDRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDALLTF 132 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQK 182 AF+I++ + +R L L GL GM+GGQMLD+ E F D V +Q+ Sbjct: 133 AFDIVTRDEVHNDPTVRLLLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQ 192 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ + C +GAI+ AS ++ L +G LG FQ+ADDLLD E D Sbjct: 193 MKTGALLRYGCVAGAILGQASPDQYRALDDYGRALGEAFQIADDLLDVEGD 243 >gi|75674693|ref|YP_317114.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255] gi|74419563|gb|ABA03762.1| farnesyl-diphosphate synthase [Nitrobacter winogradskyi Nb-255] Length = 308 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 109/243 (44%), Positives = 149/243 (61%), Gaps = 10/243 (4%) Query: 1 MNGGLPS-----KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIR 54 M GL S +L + + +L+ LL + RL A+RY+ LGG K++R Sbjct: 1 MTSGLSSADFAIRLDTTADETEAVLEKLLSDAPLPDEIARPRRLTDAMRYSSLGGGKRLR 60 Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 FLV E +++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H D+ Sbjct: 61 PFLVVESSAVFGVPREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDA 120 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FI 172 TAI+AG+GLLT AF+II+ + +R L +L G+ GM+GGQ+LD+ E F Sbjct: 121 TAILAGDGLLTLAFDIITRDEVHDDPAVRLLLTRALARAAGIGGMVGGQLLDLAGEGRFG 180 Query: 173 DE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 D V +Q+MKTGAL+ F C +GA++ ASQ + + L +G LG FQ+ADDLLD Sbjct: 181 DRGPVDVARVQQMKTGALLRFGCIAGALLGQASQKDYQALDAYGRALGEAFQIADDLLDV 240 Query: 231 EED 233 E D Sbjct: 241 ESD 243 >gi|90420298|ref|ZP_01228206.1| putative geranyltranstransferase [Aurantimonas manganoxydans SI85-9A1] gi|90335632|gb|EAS49382.1| putative geranyltranstransferase [Aurantimonas manganoxydans SI85-9A1] Length = 300 Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 106/199 (53%), Positives = 138/199 (69%), Gaps = 4/199 (2%) Query: 38 RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RLL+A+R+ AL GGK++R FLV E A LF + A+ A+ECIHCYSL+HDDLPSMD Sbjct: 38 RLLAAMRHGALGGGKRLRPFLVIESARLFGADLQAAIGAATALECIHCYSLVHDDLPSMD 97 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH YDE TAI+AG+GLLT AF +++ + L R L+ L + G Sbjct: 98 DDDLRRGKPTVHRAYDEATAILAGDGLLTLAFGLVAG-EEGLSPKARVALVALLARDAGA 156 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ+LD+ E + E ++ +Q MKTGAL+ FACE+GAI+A A E+ RLR FG Sbjct: 157 AGMVGGQVLDLAAENAVLSEDEIARMQAMKTGALIAFACEAGAIVADAGAAERARLRRFG 216 Query: 215 ENLGIIFQLADDLLDCEED 233 E +G+ FQLADDLLD D Sbjct: 217 EIVGLAFQLADDLLDETAD 235 >gi|182677419|ref|YP_001831565.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633302|gb|ACB94076.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 310 Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 105/231 (45%), Positives = 147/231 (63%), Gaps = 5/231 (2%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 +L + ++ + LD LL + +T R L A+RYA LGG K++R FL+ E A LF Sbjct: 13 RLTQIAEATEKTLDHLLGPSPLPGETLRPPRFLEAMRYASLGGGKRLRPFLLVETARLFG 72 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + LR +A+E IHCYSL+HDDLP++DN +RRG+PT H YDE TAI+ G+GLLTY Sbjct: 73 IEGEGVLRAASALEMIHCYSLVHDDLPALDNDDLRRGRPTTHKAYDEATAILVGDGLLTY 132 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ----VFMIQK 182 AF++++ P T IR +L+L+L G+ GM+GGQ+LDI+ E V +Q Sbjct: 133 AFDVLADPATHKDPAIRIELVLALARAAGVGGMVGGQVLDIEAEQAKTPHTAEAVIELQS 192 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ +A +GAI A S+ +E L +G+ LG FQ+ADD+LD E D Sbjct: 193 MKTGALLHYAVIAGAIFAGVSKQTREALSAYGQALGAAFQVADDILDVEAD 243 >gi|222150203|ref|YP_002551160.1| geranyltranstransferase [Agrobacterium vitis S4] gi|221737185|gb|ACM38148.1| geranyltranstransferase [Agrobacterium vitis S4] Length = 283 Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 114/199 (57%), Positives = 149/199 (74%), Gaps = 3/199 (1%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +LL+A+R+A+L GGK++R FLV E A LF+ ALRVGAA+EC+HCYSL+HDDLP+MD Sbjct: 20 QLLAAMRHAVLNGGKRLRPFLVVESARLFHGQDDAALRVGAALECLHCYSLVHDDLPAMD 79 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PTVHI +DE TAI+AG+ LLT+AFEII+SP+T L D ++ L+L+L GL Sbjct: 80 DDDLRRGQPTVHIAFDEATAILAGDSLLTFAFEIIASPQTTLPDAAKTALVLALARAAGL 139 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM GGQ LD+ E DE + +Q MKTGAL+ FACE+G ++A AS ++ERLR FG Sbjct: 140 GGMAGGQALDLAAEKHAPDEVGIVTLQAMKTGALLRFACEAGPVIAGASNEDRERLRQFG 199 Query: 215 ENLGIIFQLADDLLDCEED 233 E +G FQLADDLLD D Sbjct: 200 ELIGRAFQLADDLLDLTAD 218 >gi|27376057|ref|NP_767586.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110] gi|27349196|dbj|BAC46211.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110] Length = 307 Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 111/245 (45%), Positives = 150/245 (61%), Gaps = 15/245 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDD-------LLLQTASHMQTQHNDRLLSAIRYALL-GGKK 52 M G PS +KR+D DD LL + RL+ A+RY+ L GGK+ Sbjct: 1 MTGTSPSDF---AKRLDKTADDTEALLGRLLADDILPDEIARPKRLMDAMRYSSLNGGKR 57 Query: 53 IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112 +R FLV E A++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H + D Sbjct: 58 LRPFLVVESAAVFGVPREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKKTD 117 Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172 + TAI+AG+GLLT AF+I++ + N+R L +L G+ GM+GGQ+LD+ E Sbjct: 118 DATAILAGDGLLTLAFDIVTRDEIHRDANVRLLLTRALARCAGIGGMVGGQILDLAGEGR 177 Query: 173 ----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + V IQ+MKTGAL+ + C +GAI+ A+ E + L +G LG FQ+ADDLL Sbjct: 178 FGGNEPIDVARIQQMKTGALLRYGCIAGAILGQATAKEYQALDDYGRALGEAFQIADDLL 237 Query: 229 DCEED 233 D E D Sbjct: 238 DVEGD 242 >gi|260752677|ref|YP_003225570.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552040|gb|ACV74986.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 298 Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 92/201 (45%), Positives = 134/201 (66%), Gaps = 5/201 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL+ A+RYA +GG K++R LV +LFNV+ ALRVG AIECIH YSLIHDD+P MD Sbjct: 33 RLVEAMRYAAIGGGKRLRPLLVAATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPTVH +D+ +A+++G+ L AFEI+S K ++R +L+ +L G Sbjct: 93 NDDLRRGKPTVHKAFDDASAVLSGDALQALAFEILSEEKIHTDPHVRLELIQALAIASGK 152 Query: 157 QGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM+GGQ +D+ E D + +Q++KTGAL F E+GAIM +++ ++RL+ Sbjct: 153 DGMVGGQAIDLAAETSTVPFDLPTITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKA 212 Query: 213 FGENLGIIFQLADDLLDCEED 233 + ++G+ FQ+ADDL+D E D Sbjct: 213 YARDIGLAFQIADDLIDAEGD 233 >gi|56551751|ref|YP_162590.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|241762408|ref|ZP_04760487.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56543325|gb|AAV89479.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|241373095|gb|EER62744.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 298 Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 92/201 (45%), Positives = 134/201 (66%), Gaps = 5/201 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL+ A+RYA +GG K++R LV +LFNV+ ALRVG AIECIH YSLIHDD+P MD Sbjct: 33 RLVEAMRYAAIGGGKRLRPLLVVATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPTVH +D+ +A+++G+ L AFEI+S K ++R +L+ +L G Sbjct: 93 NDDLRRGKPTVHKAFDDASAVLSGDALQALAFEILSEEKIHTDPHVRLELIQALAIASGK 152 Query: 157 QGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM+GGQ +D+ E D + +Q++KTGAL F E+GAIM +++ ++RL+ Sbjct: 153 DGMVGGQAIDLAAETSTVPFDLPTITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKA 212 Query: 213 FGENLGIIFQLADDLLDCEED 233 + ++G+ FQ+ADDL+D E D Sbjct: 213 YARDIGLAFQIADDLIDAEGD 233 >gi|319781104|ref|YP_004140580.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166992|gb|ADV10530.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 305 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 112/228 (49%), Positives = 155/228 (67%), Gaps = 3/228 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + ++ +L LL A + DRL++A+R+ +L GGK++R FLV E A+LF+ Sbjct: 13 LIRRAAAVEVLLRRLLDDRALSGEIARPDRLMAAMRHGVLNGGKRLRPFLVMESAALFSA 72 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + ALRV AA+EC+HCYSLIHDDLP+MD+ +RRG+PTVH +DE TAI+AG+ LLT A Sbjct: 73 DGEAALRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHKAFDEATAILAGDALLTLA 132 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185 F+II+ T L R+ L+L+L G GM+GGQ LD++ E DE + +Q MKT Sbjct: 133 FDIIAGESTALPAERRAALVLALARAAGAGGMVGGQKLDLEAEQTPPDEAGIIRLQAMKT 192 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ FACE+GA++A A +++ERL FG +G+ FQLADDLLD D Sbjct: 193 GALIRFACEAGALIAGAPADDRERLAEFGSAIGLAFQLADDLLDLTGD 240 >gi|254502825|ref|ZP_05114976.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] gi|222438896|gb|EEE45575.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] Length = 301 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 108/230 (46%), Positives = 149/230 (64%), Gaps = 3/230 (1%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S L + RI+T L LL +T + +RL++A+R+ AL GGK++R LV + A Sbjct: 5 LKSHLAAQAGRIETALTSLLKETERDGEISRPERLINAMRHGALNGGKRLRPVLVMDAAG 64 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF ++ G A+E IHCYSL+HDDLP+MD+ +RRG+PTVH YD+ TAI+AG+ L Sbjct: 65 LFGRADDGVVQAGCALELIHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDDATAILAGDAL 124 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQ 181 LT AF++I+ + IR +L L G+ GM GGQMLD++ E D E ++ +Q Sbjct: 125 LTLAFDVITDEAVHPEAGIRLRLCRELARASGIGGMAGGQMLDLESEHRDRSEAEIRHLQ 184 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 MKTGAL+ +AC +GAI+ AS + ERL FGE +G+ FQLADDLLD E Sbjct: 185 SMKTGALLRYACRAGAILGDASDADVERLTRFGEIIGLAFQLADDLLDVE 234 >gi|325294094|ref|YP_004279958.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium sp. H13-3] gi|325061947|gb|ADY65638.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium sp. H13-3] Length = 324 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 112/230 (48%), Positives = 159/230 (69%), Gaps = 3/230 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 +KL++N+ + +++L LL A + LL A+R+ +L GGK++R FLV E +L Sbjct: 30 TKLRDNAAQTESLLGRLLSAEARADEITRPQNLLDAMRHGVLNGGKRLRPFLVIESTALL 89 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 N A VGAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVH ++DE TAI+AG+ LLT Sbjct: 90 GGNAEAAHHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDSLLT 149 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 AF+II+S + L+ + ++ L+LSL G+ GM GGQ LD+ E DE + +Q M Sbjct: 150 LAFDIIASDENPLEADRKAALVLSLARAAGIGGMAGGQALDLAAEKNAPDEAGIITLQAM 209 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ FACE+GAI+A + +E++RLR FGE +G+ FQLADDLLD D Sbjct: 210 KTGALLRFACEAGAIIAGSDVSERQRLRLFGEKIGLAFQLADDLLDLTAD 259 >gi|319409361|emb|CBI83005.1| geranyltranstransferase [Bartonella schoenbuchensis R1] Length = 300 Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 151/225 (67%), Gaps = 3/225 (1%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L +++ I+ LD LL A + + + L+ A+R+ L GGK++R FLV + A+LF++ Sbjct: 8 LAKHTHNIEKRLDTLLNYKAQNNEIARPEILIKAMRHGTLNGGKRLRPFLVIQSAALFDI 67 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +L +G A+EC+HCYSLIHDDLP+MDN +RRGKPTVH ++E TAI+AGN LLT A Sbjct: 68 PLEQSLDIGVALECVHCYSLIHDDLPAMDNDTLRRGKPTVHKAFNEATAILAGNALLTLA 127 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185 FEII+ L IR L+ +L GL GMLGGQMLD++ E D + +Q MKT Sbjct: 128 FEIIAHKACALSPQIRIDLITALAQAAGLGGMLGGQMLDLEAENKPQDHHAIITLQHMKT 187 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 AL+ FAC++GAI+ +AS+ + ++L FG +LG+ FQL DDLLD Sbjct: 188 AALISFACQAGAIIGNASKTQIDQLSTFGTHLGLAFQLTDDLLDV 232 >gi|6466227|gb|AAF12843.1|AF203881_16 geranyltransferase [Zymomonas mobilis subsp. mobilis ZM4] Length = 298 Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 91/201 (45%), Positives = 133/201 (66%), Gaps = 5/201 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL+ A+RYA +GG K++R LV +LFNV+ ALRVG AIECIH YSLIHDD+P MD Sbjct: 33 RLVEAMRYAAIGGGKRLRPLLVVATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPTVH +D+ +A+++G+ L AFEI+S K ++R +L+ +L Sbjct: 93 NDDLRRGKPTVHKAFDDASAVLSGDALQALAFEILSEEKIHTDPHVRLELIQALLSPPVK 152 Query: 157 QGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM+GGQ +D+ E D + +Q++KTGAL F E+GAIM +++ ++RL+ Sbjct: 153 DGMVGGQAIDLAAETSTVPFDLPTITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKA 212 Query: 213 FGENLGIIFQLADDLLDCEED 233 + ++G+ FQ+ADDL+D E D Sbjct: 213 YARDIGLAFQIADDLIDAEGD 233 >gi|209883275|ref|YP_002287132.1| geranyltranstransferase [Oligotropha carboxidovorans OM5] gi|209871471|gb|ACI91267.1| geranyltranstransferase [Oligotropha carboxidovorans OM5] Length = 312 Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 146/230 (63%), Gaps = 5/230 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + + +LD LL + + + RL+ A+RY+ L GGK++R FLV A++FNV Sbjct: 18 LDATAADTEALLDRLLSERPEQGEIERPHRLIEAMRYSSLNGGKRLRPFLVVASAAIFNV 77 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AL GAA+ECIHCYSLIHDDLPSMDN +RRG+PT H ++DE TAI+AG+ LLT A Sbjct: 78 PREGALMAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTSHKKFDEATAILAGDSLLTLA 137 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQKM 183 F+II+ + +R L +L G+ GM GGQ++D+ E F D+ V +Q+M Sbjct: 138 FDIITRDEVHRDPTVRLLLTRALARAAGIGGMAGGQIMDLAGEGRFGDKEPPDVAKLQQM 197 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ + C +GA++ AS+++ L +G G FQ+ADDLLD E D Sbjct: 198 KTGALLKYGCIAGALLGQASKDQYAALDAYGHAFGEAFQIADDLLDVEGD 247 >gi|15889973|ref|NP_355654.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58] gi|15157936|gb|AAK88439.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58] Length = 304 Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 111/230 (48%), Positives = 156/230 (67%), Gaps = 3/230 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++L+EN+ + + +L LL A + LL A+R+ +L GGK++R FLV E +L Sbjct: 10 TRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESVALL 69 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + L VGAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVH ++DE TAI+AG+ LLT Sbjct: 70 GGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDSLLT 129 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 AF+II+S L ++ L++SL G+ GM GGQ LD+ E DE + +Q M Sbjct: 130 LAFDIIASDDNPLAAERKAALVISLARAAGIGGMAGGQALDLAAEKKAPDEDGIITLQAM 189 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ FACE+GAI+A ++Q E++RLR FGE +G+ FQLADDLLD D Sbjct: 190 KTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTAD 239 >gi|87200267|ref|YP_497524.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM 12444] gi|87135948|gb|ABD26690.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM 12444] Length = 303 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 93/201 (46%), Positives = 128/201 (63%), Gaps = 3/201 (1%) Query: 36 NDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 DRL+ A+RYA +GG K++R LV +L V+ A+RVG AIE IH YSLIHDDLP Sbjct: 38 RDRLVEAMRYAAIGGGKRLRPLLVCATGALHGVSREAAVRVGTAIEAIHVYSLIHDDLPC 97 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN +R GKPTVH+ +D+ TA++AG+ L +AFE++S P T R +L+ +L Sbjct: 98 MDNDGLRHGKPTVHVAFDDATAVLAGDALHDFAFEVLSDPATSGDPFTRIELIRTLATAS 157 Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G+ GM GGQM+DI E D V +Q++KTGAL+ + E GAI+ + LR Sbjct: 158 GMNGMCGGQMMDIVAETSSFDLPTVTRLQQLKTGALLGASVELGAILGKVPPEGRTHLRG 217 Query: 213 FGENLGIIFQLADDLLDCEED 233 + ++G+ FQ+ADDLLD E D Sbjct: 218 YARDIGLAFQIADDLLDAEGD 238 >gi|110590588|pdb|2H8O|A Chain A, The 1.6a Crystal Structure Of The Geranyltransferase From Agrobacterium Tumefaciens Length = 335 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 111/230 (48%), Positives = 156/230 (67%), Gaps = 3/230 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++L+EN+ + + +L LL A + LL A+R+ +L GGK++R FLV E +L Sbjct: 41 TRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESVALL 100 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + L VGAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVH ++DE TAI+AG+ LLT Sbjct: 101 GGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDSLLT 160 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 AF+II+S L ++ L++SL G+ GM GGQ LD+ E DE + +Q M Sbjct: 161 LAFDIIASDDNPLAAERKAALVISLARAAGIGGMAGGQALDLAAEKKAPDEDGIITLQAM 220 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ FACE+GAI+A ++Q E++RLR FGE +G+ FQLADDLLD D Sbjct: 221 KTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTAD 270 >gi|330814378|ref|YP_004358617.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487473|gb|AEA81878.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 293 Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 97/208 (46%), Positives = 132/208 (63%), Gaps = 4/208 (1%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q + N+ L A+ Y L GGKKIRS+L LF++ TA+ V AAIEC+H YSLIHD Sbjct: 25 QQKQNNELFEAMGYGLFAGGKKIRSYLTVAAFDLFDIKEETAIAVAAAIECVHSYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLPSMDN RRGK + H ++ E TAI+AGN LLT AFEI++S L ++S L+ +L Sbjct: 85 DLPSMDNDDFRRGKESTHKKFGESTAILAGNSLLTIAFEILTSNHLNLDKEVKSDLVFAL 144 Query: 151 THNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G G+ GGQ LD+ + + DE + +Q KTG LM F E+ AI+A + N++E Sbjct: 145 ASCSGHLGIAGGQFLDLSFEGKAQDEKTIIHMQNKKTGELMGFCTEAAAIVAKKN-NDRE 203 Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ G ++G++FQ+ADDLLD D K Sbjct: 204 ELKKIGLDIGLLFQIADDLLDVYGDQNK 231 >gi|300024283|ref|YP_003756894.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299526104|gb|ADJ24573.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 301 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 95/201 (47%), Positives = 128/201 (63%), Gaps = 7/201 (3%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+R+A+L GGK+ R FLV E A LF V AL AA+ECIHCYSL+HDDLP+MD Sbjct: 34 RLADALRHAVLAGGKRFRPFLVFESAGLFGVARDAALPAAAALECIHCYSLVHDDLPAMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PTV YDE TAI+ G+ L AFE+ S P+ R++L +L G Sbjct: 94 NDELRRGQPTVWKAYDEWTAILVGDALQAIAFELTSDPRRHDDAEARAELTHALAIASGA 153 Query: 157 QGMLGGQMLDIQDEFIDE------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 GM+GGQMLD++ + + + +Q MKTG L+ CE GAI+ AS +++ L Sbjct: 154 IGMVGGQMLDLEAGRLPDQPAATIADIVRLQAMKTGRLITVGCEMGAILGRASPSDRAAL 213 Query: 211 RCFGENLGIIFQLADDLLDCE 231 + +GE+LG FQ++DDLLD E Sbjct: 214 KTYGEHLGTAFQISDDLLDAE 234 >gi|254472285|ref|ZP_05085685.1| geranyltranstransferase [Pseudovibrio sp. JE062] gi|211958568|gb|EEA93768.1| geranyltranstransferase [Pseudovibrio sp. JE062] Length = 301 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 106/236 (44%), Positives = 146/236 (61%), Gaps = 3/236 (1%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ L S + E ++ ++ L LL + + +RLL A+ YA L GGK++R L+ Sbjct: 1 MSVALKSVITETAQSLEEKLTSLLGEKVLPQEVARPERLLEAMNYAALSGGKRLRPVLMV 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E A LF L +A+ECIHCYSL HDDLP+MD+ +RRG+PT H +DE TAI+A Sbjct: 61 EAARLFGHEDEGTLVAASALECIHCYSLAHDDLPAMDDDDLRRGRPTTHKAFDEATAILA 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177 G+ LLT AF+ I+ + IR +L L G+ GM GGQMLD+ E D E ++ Sbjct: 121 GDALLTIAFDFIADEQVHPDAAIRLRLSQELARASGIGGMAGGQMLDLASEHRDRTEAEI 180 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +Q MKTGAL+ +AC +GAI+A+AS ++ RL FGE +G+ FQLADDLLD D Sbjct: 181 RQLQAMKTGALIRYACRAGAILANASDDDIARLTRFGEIIGLAFQLADDLLDLTGD 236 >gi|299132868|ref|ZP_07026063.1| Polyprenyl synthetase [Afipia sp. 1NLS2] gi|298593005|gb|EFI53205.1| Polyprenyl synthetase [Afipia sp. 1NLS2] Length = 312 Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 101/230 (43%), Positives = 143/230 (62%), Gaps = 5/230 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + + +LD LL + + RL+ A+RY+ L GGK++R FL A++F+V Sbjct: 18 LDATAADTEALLDRLLSERPEQGEILRPKRLIEAMRYSSLNGGKRLRPFLAVASAAMFDV 77 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AL GAA+ECIHCYSLIHDDLPSMDN +RRG+PT H ++D+ TAI+AG+ LLT A Sbjct: 78 PRQGALLAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTSHKKFDDATAILAGDSLLTLA 137 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQKM 183 F+II+ + +R L +L G+ GM GGQ++D+ E F D+ V +Q+M Sbjct: 138 FDIITRDEVHRDPTVRLLLTRALARAAGIGGMAGGQIMDLAGEGRFGDKEPPDVAKLQQM 197 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ + C +GA++ AS+ + L +G G FQ+ADDLLD E D Sbjct: 198 KTGALLKYGCIAGALLGQASKEQYAALDAYGHAFGEAFQIADDLLDVEGD 247 >gi|118591313|ref|ZP_01548711.1| geranyltranstransferase [Stappia aggregata IAM 12614] gi|118435985|gb|EAV42628.1| geranyltranstransferase [Stappia aggregata IAM 12614] Length = 301 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 143/223 (64%), Gaps = 3/223 (1%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70 +K ++ L+ LL A + RLL+A+R+ AL GGK++R LV E A+LF Sbjct: 12 QAKFVEATLETLLADQALPGEQVRPPRLLAAMRHGALNGGKRLRPVLVMETANLFGRADD 71 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 L+ A+E +HCYSL+HDDLP+MD+ +RRG+PTVH YDE TAI+AG+ LLT AF++ Sbjct: 72 GVLQAACALELVHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDEATAILAGDALLTLAFDV 131 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGAL 188 I+ +R +L L G GM GGQMLD++ E + E ++ +Q MKTGAL Sbjct: 132 ITGEAVHADAAVRLRLSRELARASGFGGMAGGQMLDLESEHRERTEAEIRQLQSMKTGAL 191 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + +AC +GAI+A A + + +RL FGE +G+ FQLADDLLD E Sbjct: 192 LRYACRAGAILADAPEADIDRLTRFGEVIGLAFQLADDLLDVE 234 >gi|170744677|ref|YP_001773332.1| polyprenyl synthetase [Methylobacterium sp. 4-46] gi|168198951|gb|ACA20898.1| Polyprenyl synthetase [Methylobacterium sp. 4-46] Length = 290 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 136/223 (60%), Gaps = 7/223 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALR 74 ++ LD+ L + RL+ A+R+A+LGG K++R FL E A L + AL Sbjct: 1 MEVFLDERLGDATGPGEITRPPRLMQAMRHAVLGGGKRLRPFLTIETARLLGGPYPGALA 60 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 G IE +HCYSL+HDDLP+MD+ +RRGKPTVH +DE TAI+AG+ LLT AFE+++ P Sbjct: 61 AGGGIELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAFDEATAILAGDALLTLAFELLADP 120 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDETQVFMIQKMKTGAL 188 Q IR+ L+L L GL GM+GGQ+LD+ E +D +Q MKTGAL Sbjct: 121 AWQPDAGIRADLVLGLARAAGLGGMVGGQLLDLGAEGRFGEAALDVDATLQLQAMKTGAL 180 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + + E+GAI+ A ++ L +G LG FQ+ADD+LD E Sbjct: 181 LAVSVEAGAIVGGADAEQRAALLAYGRALGQAFQVADDILDRE 223 >gi|295688780|ref|YP_003592473.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756] gi|295430683|gb|ADG09855.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756] Length = 299 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 95/197 (48%), Positives = 131/197 (66%), Gaps = 1/197 (0%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA LG GK++R F E +F++ LR A+ECIH YSL+HDDLP+MD Sbjct: 37 RLTEAMRYAALGPGKRLRPFFALETGKMFDLAERPVLRAACALECIHAYSLVHDDLPAMD 96 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PTVH QYDE TAI+AG+ L T AFEI++ P T +IRS+L+ L G Sbjct: 97 DDDVRRGRPTVHKQYDEATAILAGDALQTAAFEIMAHPDTHDDAHIRSELVRKLAIASGA 156 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 +GM+GGQM+DI D V +Q++KTGAL+ FA E I+A A ++E+ L F ++ Sbjct: 157 RGMVGGQMIDILGVRDDLGAVARMQRLKTGALIAFAFEIPLIIARAKESERHALMAFAQD 216 Query: 217 LGIIFQLADDLLDCEED 233 LG+ +Q+ DD+LD E D Sbjct: 217 LGLAYQIVDDILDAEGD 233 >gi|296447264|ref|ZP_06889193.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b] gi|296255226|gb|EFH02324.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b] Length = 306 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 106/231 (45%), Positives = 143/231 (61%), Gaps = 5/231 (2%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66 +L E + LD LL + + RLL A+RY AL GGK++R FL E A LF Sbjct: 9 RLDEAAAATQATLDALLAPSPLEGEIARPARLLEAMRYVALGGGKRLRPFLALESARLFG 68 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V +A R AAIE IHCYSL HDDLP+MD+ +RRG+PT H +DE TAI+AG+GLLTY Sbjct: 69 VCGESAARAAAAIEMIHCYSLAHDDLPAMDDDDLRRGRPTAHKAFDEATAILAGDGLLTY 128 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK 182 AF++++ P T IR++L+L+L GL GM+GGQ LD++ E + + + +Q Sbjct: 129 AFDVLADPATHADPLIRARLVLALARAAGLGGMVGGQALDLEAEKAAAPLTQEETLRLQA 188 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ + GAI+ AS L +G+ LG FQ+ADD+LD E D Sbjct: 189 MKTGALLRVCVDFGAILGGASAEVAAALGRYGDALGAAFQIADDILDAEGD 239 >gi|83945403|ref|ZP_00957751.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633] gi|83851237|gb|EAP89094.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633] Length = 296 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 96/231 (41%), Positives = 148/231 (64%), Gaps = 9/231 (3%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65 + L E + R+ LD LL + R++SA+RYA LG GK++R FL+ E L Sbjct: 6 THLTETADRVTVALDALLARP-----DGPEARVISAMRYAALGPGKRLRPFLLIEAGFLV 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + LR A+EC+H YSL+HDDLP MD+ +RRG+PTVH +YDE TA++AG+ L + Sbjct: 61 GADERALLRAACAVECVHAYSLVHDDLPCMDDDDLRRGRPTVHKEYDEATAVLAGDALQS 120 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI---QK 182 AFE+++ P+T +R++L+L L+ G +GM+GGQM+D+ E + + + +I Q+ Sbjct: 121 QAFELLADPETHSNPAVRAELVLRLSKASGPRGMVGGQMIDMAVEAGELSDIGIITRCQR 180 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ F E+G ++A+A + ++ L F +LG+ +Q+ DDLLD E D Sbjct: 181 MKTGALISFCAEAGGVIANADRAQRIALEGFAHDLGLCYQIVDDLLDAEGD 231 >gi|13473247|ref|NP_104814.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Mesorhizobium loti MAFF303099] gi|14023995|dbj|BAB50600.1| geranyltranstransferase; farnesyl-diphosphate synthase [Mesorhizobium loti MAFF303099] Length = 305 Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 108/200 (54%), Positives = 146/200 (73%), Gaps = 3/200 (1%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 DRL++A+R+ +L GGK++R FLV E A+LF+ + ALRV AA+EC+HCYSLIHDDLP+M Sbjct: 41 DRLMAAMRHGVLNGGKRLRPFLVMESAALFSADGEAALRVAAALECVHCYSLIHDDLPAM 100 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRG+PTVH +DE TAI+AG+ LLT AF+I++S T L + R+ L+L+L G Sbjct: 101 DDDDLRRGQPTVHKAFDEATAILAGDALLTLAFDIVASEATVLPADRRAALVLALARAAG 160 Query: 156 LQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+GGQ LD++ E DE + +Q MKTGAL+ FACE+GAI+A A ++ERL F Sbjct: 161 AGGMVGGQKLDLEAEQTPPDEAGIITLQAMKTGALIRFACEAGAIIAGAPAEDRERLAEF 220 Query: 214 GENLGIIFQLADDLLDCEED 233 G +G+ FQLADDLLD D Sbjct: 221 GSAIGLAFQLADDLLDLTAD 240 >gi|306841490|ref|ZP_07474190.1| geranyltranstransferase [Brucella sp. BO2] gi|306288454|gb|EFM59810.1| geranyltranstransferase [Brucella sp. BO2] Length = 229 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 92/163 (56%), Positives = 120/163 (73%), Gaps = 2/163 (1%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYAF+II+ Sbjct: 2 LRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYAFDIIA 61 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 S +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKTGAL+ Sbjct: 62 SDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIR 121 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 FACE+GAI+A AS+ ++ER+ FG +G+ FQLADDLLD D Sbjct: 122 FACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTAD 164 >gi|328541834|ref|YP_004301943.1| Geranyltranstransferase protein [polymorphum gilvum SL003B-26A1] gi|326411586|gb|ADZ68649.1| Geranyltranstransferase protein [Polymorphum gilvum SL003B-26A1] Length = 303 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 105/230 (45%), Positives = 146/230 (63%), Gaps = 3/230 (1%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 L + L E + R++ +L D L +T+ RL+ A+R+A LGG K++R L+ E A Sbjct: 7 LEAHLAEVAGRMEAVLADALAPAPKDGETERPSRLVEAMRHAALGGGKRLRPVLMVETAR 66 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF R AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE TAI+AG+ L Sbjct: 67 LFGRADDGVYRAAAALECIHCYSLVHDDLPAMDDDDLRRGRPTVHKAFDEATAILAGDAL 126 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 LT AF++I+ +R +L L G+ GM GGQMLD++ E ET++ +Q Sbjct: 127 LTLAFDLIAEAPVHPDPAVRLRLSQELARAAGVGGMAGGQMLDLEAEHRVRSETEIRTLQ 186 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 MKTGAL+ +AC +GAI+A A + R+ FGE +G+ FQLADDLLD E Sbjct: 187 AMKTGALLRYACRAGAILADAGAEDVARMTRFGEVVGLAFQLADDLLDLE 236 >gi|154244163|ref|YP_001415121.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2] gi|15553715|gb|AAL01997.1|AF408846_1 farnesyl diphosphate synthase [Xanthobacter autotrophicus Py2] gi|154158248|gb|ABS65464.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2] Length = 308 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 96/214 (44%), Positives = 140/214 (65%), Gaps = 13/214 (6%) Query: 37 DRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RL++A+R+ AL GGK++R FLV E A+LF + A+ AIECIHCYSL+HDDLP+M Sbjct: 37 ERLMAAMRHGALGGGKRLRPFLVIESAALFGIPADQAVTAATAIECIHCYSLVHDDLPAM 96 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRG+PTVH +DE TAI+AG+GLLT AF++++ +R L+ +L G Sbjct: 97 DDDDLRRGRPTVHRAFDEATAILAGDGLLTLAFDLLAGEDAHPDPAVRIALVRALARASG 156 Query: 156 LQGMLGGQMLDIQDE---------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + GM+GGQMLD+ E + E + +Q MKTGAL+ + E+GA++ A+ +E Sbjct: 157 IGGMVGGQMLDLAAEGRFSGGTPLALAEDAIRDLQAMKTGALLAVSVEAGALLGGATADE 216 Query: 207 KERLRCFGENLGIIFQLADDLLDCE---EDLPKK 237 + L +G LG FQ+ADD+LD E E++ KK Sbjct: 217 RAALLAYGRALGAAFQIADDILDVEGTAEEVGKK 250 >gi|16126308|ref|NP_420872.1| geranyltranstransferase [Caulobacter crescentus CB15] gi|221235087|ref|YP_002517523.1| dimethylallyltransferase/geranyltranstransferase [Caulobacter crescentus NA1000] gi|13423548|gb|AAK24040.1| geranyltranstransferase [Caulobacter crescentus CB15] gi|220964259|gb|ACL95615.1| dimethylallyltransferase/Geranyltranstransferase [Caulobacter crescentus NA1000] Length = 294 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 99/219 (45%), Positives = 139/219 (63%), Gaps = 5/219 (2%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR 74 I T+ D LL A ++ RL A+RYA LG GK++R F E +F++ LR Sbjct: 14 IVTVALDELLPRADGPES----RLTEAMRYAALGPGKRLRPFFALETGKMFDLPERPVLR 69 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+ECIH YSL+HDDLP+MD+ +RRG+PTVH QYDE TAI+AG+ L T AFEI++ P Sbjct: 70 AACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHKQYDEATAILAGDALQTAAFEIMAHP 129 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 T ++RS+L+ L G +GM GGQM+D+ D V +Q++KTGAL+ FA E Sbjct: 130 DTHDDGHVRSELVRKLAIASGARGMCGGQMIDLLGVRDDLGAVARMQRLKTGALIAFAFE 189 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+A A ++E+ L F ++LG+ +Q+ DD+LD E D Sbjct: 190 IPLIIARAKESERSALMAFAQDLGLAYQIVDDILDAEGD 228 >gi|167647277|ref|YP_001684940.1| polyprenyl synthetase [Caulobacter sp. K31] gi|167349707|gb|ABZ72442.1| Polyprenyl synthetase [Caulobacter sp. K31] Length = 294 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 94/197 (47%), Positives = 130/197 (65%), Gaps = 1/197 (0%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA LG GK++R F E +F++ LR A+ECIH YSL+HDDLP+MD Sbjct: 32 RLTEAMRYAALGPGKRLRPFFALETGKMFDLPERPVLRAACALECIHAYSLVHDDLPAMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PTVHIQYDE TAI+AG+ L T AFEI++ P T ++RS+L+ L G Sbjct: 92 DDDVRRGRPTVHIQYDEATAILAGDALQTAAFEIMAHPDTHDDGHVRSELVRKLAIASGA 151 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 +GM GGQM+D+ D V +Q++KTGAL+ FA E I+A A +E+ L F ++ Sbjct: 152 KGMAGGQMIDLLGVRDDLGAVARMQRLKTGALIAFAFEIPLIIARAKDSERSALMGFAQD 211 Query: 217 LGIIFQLADDLLDCEED 233 LG+ +Q+ DD+LD E D Sbjct: 212 LGLAYQIVDDILDEEGD 228 >gi|148260202|ref|YP_001234329.1| polyprenyl synthetase [Acidiphilium cryptum JF-5] gi|326402853|ref|YP_004282934.1| geranyltranstransferase [Acidiphilium multivorum AIU301] gi|146401883|gb|ABQ30410.1| farnesyl-diphosphate synthase [Acidiphilium cryptum JF-5] gi|325049714|dbj|BAJ80052.1| geranyltranstransferase [Acidiphilium multivorum AIU301] Length = 301 Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 98/219 (44%), Positives = 143/219 (65%), Gaps = 8/219 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALR 74 I+T LD LL + L+ A+RYA+LGG K++R FLV E A LF+VN A+R Sbjct: 21 IETELDVLL-----PLPEGEERPLVEAMRYAVLGGGKRMRGFLVIETARLFSVNITCAVR 75 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V AA+E +H YSL+HDDLP+MD+ +RRGKP+ H +DE TAI+AG+ L T AFE+++ P Sbjct: 76 VAAAVEMLHAYSLVHDDLPAMDDDDLRRGKPSCHKAFDEATAILAGDALQTRAFEVLAEP 135 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 T +R +L+L+L G +GM+GGQM+DI E ++ + +Q +KTG L+ F+ Sbjct: 136 DTHSDPEVRCELVLALAAASGARGMVGGQMIDIVSEGRQLEPPVITRLQALKTGRLIQFS 195 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 E+GAI+ A ++ + +G +LG FQ+ADD+LD E Sbjct: 196 AEAGAILGRAPGPQRHHIAGYGRDLGAAFQIADDILDEE 234 >gi|190571159|ref|YP_001975517.1| geranyltranstransferase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018563|ref|ZP_03334371.1| geranyltranstransferase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357431|emb|CAQ54865.1| geranyltranstransferase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995514|gb|EEB56154.1| geranyltranstransferase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 260 Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 92/212 (43%), Positives = 133/212 (62%), Gaps = 12/212 (5%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+++ + ++L+SA+RY LL K IRSFLV +S+FN+ A+ AAIE Sbjct: 10 LVVEVNKLLPENSENKLISAMRYVLLAPAKHIRSFLVIASSSIFNIKVEKAITAAAAIEF 69 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSLIHDDLP MDN RRG+P+ H ++ E TA++AG+ LLT AFE++S Sbjct: 70 IHAYSLIHDDLPCMDNSDTRRGQPSCHKKFGEATAVLAGDALLTLAFEVLSL-------- 121 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 + +++ L+ IG++GM+GGQ+LDI +F ++ I MKT L +CE GAI+ Sbjct: 122 LNCEIIKVLSQAIGMKGMVGGQILDIGADF---DKIKEIHLMKTAKLFAASCEIGAIIGG 178 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A+ E+E L +G NLG+IFQ DD+ D E+D Sbjct: 179 ATDKEREALYNYGINLGLIFQAKDDIEDYEQD 210 >gi|294084635|ref|YP_003551393.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664208|gb|ADE39309.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum IMCC1322] Length = 302 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 97/216 (44%), Positives = 130/216 (60%), Gaps = 14/216 (6%) Query: 30 HMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIEC 81 + Q+ RL+ A+RYA+L GGK++R+ LV A L ALRV AA+EC Sbjct: 24 NAQSMQAPRLVDAMRYAVLNGGKRMRAGLVLGAARLAATESDASTYIDSRALRVAAALEC 83 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H YSLIHDDLP+MD+ RRGK + HI YDE TAI+AG+ L T AFEI++ T Sbjct: 84 LHAYSLIHDDLPAMDDADTRRGKSSCHIAYDEATAILAGDALQTLAFEILADDATHPDPA 143 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGA 197 +R L+ +L GL GM GGQMLD+Q E + ET+ +Q MKTGAL+ A GA Sbjct: 144 VRVALVTTLARASGLAGMAGGQMLDLQAETRTLTLAETE--QMQMMKTGALIVCAASCGA 201 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ AS + + + LG+ FQ+ADDLLD + D Sbjct: 202 LVGEASSTLVNAIVAYADKLGLAFQIADDLLDYDGD 237 >gi|114797210|ref|YP_760540.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444] gi|114737384|gb|ABI75509.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444] Length = 295 Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 97/229 (42%), Positives = 146/229 (63%), Gaps = 8/229 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66 +L E + ++ LD L+ AS + L+ A+R+A L GK++R F V E ++F Sbjct: 7 RLTEVADKVTVALDQLI-PPASGPEAN----LMRAMRHAALANGKRMRPFFVLETGAMFG 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + LR AA+ECIHCYSL+HDDLP MD+ RRG+PTVH +DE TA++AG+ LLT Sbjct: 62 ASEKSLLRTAAALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAFDEATAVLAGDALLTL 121 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMK 184 AF+I++S +T +R L+ L G +GM+GGQM+D+ +E D + +Q++K Sbjct: 122 AFKILASSETHDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPRDLNTITRMQRLK 181 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TGAL+ +A E+G I+ HA + E+ L F +LG+ +Q+ADD+LD E D Sbjct: 182 TGALISYALEAGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGD 230 >gi|254561671|ref|YP_003068766.1| geranyltranstransferase [Methylobacterium extorquens DM4] gi|254268949|emb|CAX24910.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Methylobacterium extorquens DM4] Length = 320 Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 103/239 (43%), Positives = 148/239 (61%), Gaps = 11/239 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60 G +L + + ++T L DLL T + RL+ A+R+A+LGG K++R FL E Sbjct: 17 TGDFTHRLAQVADTVETFLVDLLGPTLQAGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + AL GA +E +HCYSL+HDDLP+MD+ +RRGKPTVH YDE TAI+ G Sbjct: 77 TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--------I 172 + L T AFE+ + P+ Q IR++L+L L GL GM+GGQ+LD+ E I Sbjct: 137 DALQTLAFEVTADPRWQPDPAIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPATMDI 196 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 D+T +Q MKTGA++ F+ E+GA++ A+ +E+ L +G+ LG FQ+ADD+LD E Sbjct: 197 DDT--LRMQAMKTGAILAFSVEAGALVGGANADERAALLRYGKALGQAFQVADDILDRE 253 >gi|307943552|ref|ZP_07658896.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp. TrichSKD4] gi|307773182|gb|EFO32399.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp. TrichSKD4] Length = 310 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 106/230 (46%), Positives = 153/230 (66%), Gaps = 3/230 (1%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L ++L + +++ LD++L T + +RLL+A+R+ AL GGK+IR L+ E Sbjct: 14 LKTRLTTQAAKVEARLDEMLAATPLENEVARPERLLAAMRHGALNGGKRIRPVLLLETVR 73 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF+ + AL + A+E IHCYSL+HDDLP+MD+ +RRG+PTVHI YDE TAI+AG+ L Sbjct: 74 LFDQDDTQALDIACALEFIHCYSLVHDDLPAMDDDDLRRGQPTVHIAYDEATAILAGDAL 133 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQ 181 LT AF+++++P I+ +L+ L GL GM GGQMLD++ E D E ++ +Q Sbjct: 134 LTLAFDVVANPGLHQDARIQLRLVRELAQAAGLGGMAGGQMLDLESEHRDRSEAEIRKLQ 193 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 MKTGAL+ F C GAI ++A + + ER+ FGE +G+ FQLADDLLD E Sbjct: 194 SMKTGALLRFGCRGGAIFSNAREEDVERVTHFGEIIGLAFQLADDLLDVE 243 >gi|163851951|ref|YP_001639994.1| polyprenyl synthetase [Methylobacterium extorquens PA1] gi|218530703|ref|YP_002421519.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4] gi|240139077|ref|YP_002963552.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Methylobacterium extorquens AM1] gi|163663556|gb|ABY30923.1| Polyprenyl synthetase [Methylobacterium extorquens PA1] gi|218523006|gb|ACK83591.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4] gi|240009049|gb|ACS40275.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Methylobacterium extorquens AM1] Length = 320 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 103/239 (43%), Positives = 148/239 (61%), Gaps = 11/239 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60 G +L + + ++T L DLL T + RL+ A+R+A+LGG K++R FL E Sbjct: 17 TGDFTHRLAQVADTVETFLVDLLGPTLQAGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + AL GA +E +HCYSL+HDDLP+MD+ +RRGKPTVH YDE TAI+ G Sbjct: 77 TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--------I 172 + L T AFE+ + P+ Q IR++L+L L GL GM+GGQ+LD+ E I Sbjct: 137 DALQTLAFEVTADPRWQPDPAIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPATMDI 196 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 D+T +Q MKTGA++ F+ E+GA++ A+ +E+ L +G+ LG FQ+ADD+LD E Sbjct: 197 DDT--LRMQAMKTGAILAFSVEAGALVGGANADERAALLRYGKALGQAFQVADDILDRE 253 >gi|260461502|ref|ZP_05809749.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] gi|259032572|gb|EEW33836.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] Length = 305 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 107/199 (53%), Positives = 143/199 (71%), Gaps = 3/199 (1%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL++A+R+ +L GGK++R FLV E A+LF+ + ALRV AA+EC+HCYSLIHDDLP+MD Sbjct: 42 RLMAAMRHGVLNGGKRLRPFLVMESAALFSADGEAALRVAAALECVHCYSLIHDDLPAMD 101 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PTVH +DE TAI+AG+ LLT AF+II+ T L R+ L+L+L G Sbjct: 102 DDDMRRGQPTVHRAFDEATAILAGDALLTLAFDIIAGEATVLPAERRAALVLALARAAGA 161 Query: 157 QGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ LD++ E DE + +Q MKTGAL+ FACE+GAI+A A ++ERL FG Sbjct: 162 GGMVGGQTLDLEAERTPPDEAGIIRLQAMKTGALIRFACEAGAIIAGAPAEDRERLAEFG 221 Query: 215 ENLGIIFQLADDLLDCEED 233 +G+ FQLADDLLD D Sbjct: 222 SAVGLAFQLADDLLDLTAD 240 >gi|329115335|ref|ZP_08244089.1| Geranyltranstransferase [Acetobacter pomorum DM001] gi|326695314|gb|EGE47001.1| Geranyltranstransferase [Acetobacter pomorum DM001] Length = 312 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 96/229 (41%), Positives = 145/229 (63%), Gaps = 8/229 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 L + ++ I+ +D LL T T + RL+ A+RYA LGG K++R +L AS Sbjct: 21 LKQDMGARARVIEHTIDTLLPLT-----TGGDARLIEAMRYATLGGGKRLRGYLAIVTAS 75 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF V + RV A++E +H YSL+HDDLP+MD+ +RRG+P+ H ++DE TAI+AG+ L Sbjct: 76 LFGVPESQSARVAASVEMLHAYSLVHDDLPAMDDDDMRRGQPSTHRKFDEATAILAGDAL 135 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 T AFEI+++ +T N+R L+ + G GM+GGQM+D++ E + +V + Sbjct: 136 QTKAFEILAASQTHADANVRIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLAEVRHLH 195 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +KTG L+ ++ ESGAI+ AS N + RLR +G N+G FQ+ADD+LD Sbjct: 196 ALKTGCLIRYSAESGAILGQASPNLRRRLRSYGANIGAAFQIADDVLDA 244 >gi|197104377|ref|YP_002129754.1| geranyltranstransferase [Phenylobacterium zucineum HLK1] gi|196477797|gb|ACG77325.1| geranyltranstransferase [Phenylobacterium zucineum HLK1] Length = 292 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 98/230 (42%), Positives = 138/230 (60%), Gaps = 6/230 (2%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63 L ++ E + + LD+LL + RL A+RYA LG GK++R+F E Sbjct: 3 LSRRVAEAADLVTVALDELLPRGEGP-----ESRLTEAMRYAALGPGKRLRTFFALETGR 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F+++ LR A+ECIH YSL+HDDLP MD+ +RRG+PTVH YDE TA++AG+ L Sbjct: 58 MFDLDDRPVLRSACALECIHAYSLVHDDLPCMDDDDVRRGRPTVHKAYDEATAVLAGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 T AFEI++ P T IR++L+ L H G +GM GGQM+DI D V +Q++ Sbjct: 118 QTAAFEILAHPDTHPDGGIRAELVARLAHASGARGMAGGQMIDILGVREDLGGVARMQRL 177 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ A E ++A A E+ L F +LG+ +Q+ DDLLD E D Sbjct: 178 KTGALIACAFELPLVLARAMDGERHALMNFAHDLGLAYQIVDDLLDAEGD 227 >gi|307293392|ref|ZP_07573238.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1] gi|306881458|gb|EFN12674.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1] Length = 302 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 98/230 (42%), Positives = 144/230 (62%), Gaps = 8/230 (3%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65 S+ ++ +D + D LL + RL A+R+A +GG K++R LV + LF Sbjct: 13 SRAAALAEDVDRLFDTLLA-----VPDDPRRRLYEAMRHAAMGGGKRLRPLLVQAASDLF 67 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 N++ +ALRVG A+ECIH YSL+HDDLP+MD+ +RRGKPTVH +DE TAI+AG+ L Sbjct: 68 NISRDSALRVGVAVECIHVYSLVHDDLPAMDDDDMRRGKPTVHKAFDEATAILAGDCLHD 127 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 AFEI++ +T +R +L+ +L G GM GGQM+D++ E D V +Q++ Sbjct: 128 LAFEILADEETHPDPFVRVELVKALAVASGTSGMAGGQMMDLEAEKASFDLPTVTRLQQL 187 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ F ++ AIMA + + RL + ++G+ FQ+ADDLLD E D Sbjct: 188 KTGALIAFCVDAAAIMARIPPDARPRLHGYARDIGLAFQIADDLLDVEGD 237 >gi|258542579|ref|YP_003188012.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256633657|dbj|BAH99632.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256636716|dbj|BAI02685.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-03] gi|256639769|dbj|BAI05731.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-07] gi|256642825|dbj|BAI08780.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-22] gi|256645880|dbj|BAI11828.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-26] gi|256648933|dbj|BAI14874.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-32] gi|256651920|dbj|BAI17854.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654977|dbj|BAI20904.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-12] Length = 312 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 98/233 (42%), Positives = 147/233 (63%), Gaps = 9/233 (3%) Query: 2 NGGL-PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 NG L + ++ I+ +D LL T T + RL+ A+RYA LGG K++R +L Sbjct: 17 NGALLKQDMGARARVIEHTIDTLLPLT-----TGGDARLIEAMRYATLGGGKRLRGYLAI 71 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 ASLF V + RV A++E +H YSL+HDDLP+MD+ +RRG+P+ H Q+DE TAI+A Sbjct: 72 VTASLFGVPESQSARVAASVEMLHAYSLVHDDLPAMDDDDMRRGQPSTHRQFDEATAILA 131 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 G+ L T AFEI+++ +T N+R L+ + G GM+GGQM+D++ E + +V Sbjct: 132 GDALQTKAFEILAASQTHTDANVRIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLEEV 191 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + +KTG L+ ++ ESGAI+ AS + + RLR +G N+G FQ+ADD+LD Sbjct: 192 RHLHALKTGCLIRYSAESGAILGQASPDLRRRLRSYGANIGAAFQIADDVLDA 244 >gi|158426076|ref|YP_001527368.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571] gi|158332965|dbj|BAF90450.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571] Length = 311 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 91/205 (44%), Positives = 128/205 (62%), Gaps = 10/205 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++A+R+ L GGK++R LV E A+LF V A+ AA+EC+HCYSLIHDDLP+MDN Sbjct: 42 LMAAMRHGSLDGGKRLRPLLVVESAALFGVPLARAITAAAALECVHCYSLIHDDLPAMDN 101 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+PTVH+ + E TAI+AG+GLLT AF++++ +R L+ L G+ Sbjct: 102 DLLRRGRPTVHVAFGEETAILAGDGLLTLAFDLLAGEDAHPDAQVRIALVRLLARASGIG 161 Query: 158 GMLGGQMLDIQDE---------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 GM+GGQMLD+ E + E + +Q MKTGAL+ E GA++ A + Sbjct: 162 GMVGGQMLDLAAEGRFSGGTPQALSEADIRTLQAMKTGALLRAGVEMGALLGGADAEARA 221 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 L +G LG+ FQ+ADD+LD E D Sbjct: 222 ALAAYGTALGVAFQIADDILDIEGD 246 >gi|330994690|ref|ZP_08318613.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1] gi|329758331|gb|EGG74852.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1] Length = 311 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 93/229 (40%), Positives = 147/229 (64%), Gaps = 8/229 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 L + + + I++++D LL + RL+ A+RYA LGG K++R +LV E AS Sbjct: 20 LRASMSARATAIESMIDRLLPRVEGG-----EARLIDAMRYATLGGGKRLRGYLVAEVAS 74 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LFNV A RV A++E +H YSL+HDDLP+MD+ +RRG+P+ H ++DE TAI+AG+ L Sbjct: 75 LFNVAAEGADRVAASVEMLHAYSLVHDDLPAMDDDDLRRGQPSTHRKFDEATAILAGDAL 134 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 T AF+I+++P T +R L+ +L G GM+GGQM+D++ E + +V + Sbjct: 135 QTMAFDILANPLTHAGAEVRINLVRALADASGAAGMVGGQMIDMEGEGRALSLEEVARLH 194 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +KTG L+ ++ E+GAI+ A ++ + R+ +G +LG FQ+ADD+LD Sbjct: 195 ALKTGCLIRYSAEAGAILGQAGEDARLRISAYGRDLGAAFQIADDVLDA 243 >gi|332187832|ref|ZP_08389566.1| polyprenyl synthetase family protein [Sphingomonas sp. S17] gi|332012182|gb|EGI54253.1| polyprenyl synthetase family protein [Sphingomonas sp. S17] Length = 296 Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 96/198 (48%), Positives = 129/198 (65%), Gaps = 3/198 (1%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +A+R+A +GG K++R LV A LF+V+ A V A+E IH YSLIHDDLP+MD+ Sbjct: 34 LYAAMRHAAIGGGKRLRPLLVFATARLFDVDRDCAGWVATALEAIHVYSLIHDDLPAMDD 93 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPTVH +DE TAI+AG+ L AFEI++ P T +RS+L+L L G Sbjct: 94 DDMRRGKPTVHKAFDEATAILAGDCLHALAFEILADPSTHPDPFVRSELILDLARASGPS 153 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM GGQM+D++ E D V +Q+MKTGAL+C A E+GAI+ + LR + Sbjct: 154 GMAGGQMMDLEAERQIFDLPTVTRLQQMKTGALICAAVEAGAILGRVPPEGRTHLRGYAH 213 Query: 216 NLGIIFQLADDLLDCEED 233 +LG+ FQ+ADDLLD E D Sbjct: 214 DLGLAFQIADDLLDAEGD 231 >gi|58696945|ref|ZP_00372440.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila simulans] gi|58699606|ref|ZP_00374302.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila ananassae] gi|225630859|ref|YP_002727650.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi] gi|58533876|gb|EAL58179.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila ananassae] gi|58536823|gb|EAL60043.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila simulans] gi|225592840|gb|ACN95859.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi] Length = 263 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 9/212 (4%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+++ + ++L+SA+RY LL K IRSFLV + +FN + V AAIE Sbjct: 10 LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H YSLIHDDLP MDN RR + + H ++DE TA++AG+ LLT AFE++SS + Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEK---- 125 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 R +++ L+ IG++GM+GGQ LDI +F ++ I MKT L +CE GAI+ Sbjct: 126 -RCEIIKVLSQAIGIRGMVGGQALDIDTDF---NKIKEIHLMKTAKLFAASCEIGAIIGG 181 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A+ ++ L FG NLG+IFQ DD+ D E+D Sbjct: 182 ATDEQRRALYNFGINLGLIFQAKDDIEDYEQD 213 >gi|254455595|ref|ZP_05069024.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211] gi|207082597|gb|EDZ60023.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211] Length = 290 Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 86/218 (39%), Positives = 136/218 (62%), Gaps = 3/218 (1%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 +++ I D + + Q N +L+ A++Y L GGKKIRS ++ + S+ ++++ T + Sbjct: 4 KLNKIAKDTNIFLKDFINKQKNSKLILAMKYGLFPGGKKIRSKILIDIGSMMSIDYKTLI 63 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +GAA+ECIH Y+LIHDDLP MD+ IRRGKP+ HI++ E TAI+AGN L T A EI++S Sbjct: 64 AIGAAVECIHAYTLIHDDLPCMDDDKIRRGKPSTHIKFGESTAILAGNSLQTMACEILTS 123 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCF 191 K ++ D I+ +L+ L+ G G+ GGQ LD+ E + + ++ ++ KTG L F Sbjct: 124 SKLKIGDKIKIELIKKLSECSGHLGVAGGQYLDLSYEKRKVSKKKIIEMEIKKTGKLFSF 183 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 C + AI+ E + G +G++FQ+ADDL+D Sbjct: 184 CCVAPAIIKKKDNQEIKFFEDLGSKIGLLFQIADDLID 221 >gi|114569399|ref|YP_756079.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10] gi|114339861|gb|ABI65141.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10] Length = 295 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 97/229 (42%), Positives = 141/229 (61%), Gaps = 8/229 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66 +L E++ R+ T+ D LL A + N SA+RYA LG GK++R FL E L + Sbjct: 7 RLNEHADRV-TVALDALLPRAEGPEAHLN----SAMRYAALGPGKRLRPFLTIEAGHLVH 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + LR A+ECIH YSLIHDDLP MD+ +RRG+PTVH YDE TA++AG+GL + Sbjct: 62 ADERGVLRAACALECIHAYSLIHDDLPCMDDDDMRRGRPTVHKAYDEATAVLAGDGLQSI 121 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 A+EI++ P T + ++R++L+ L+ G GM+GGQM+DI+ E D + V + +MK Sbjct: 122 AYEILAHPDTHQRGSVRARLVERLSRASGPYGMVGGQMIDIRAETEQFDISVVTRMHRMK 181 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TGAL+ +A E+ I+ + L F +LG+ +Q+ DDLLD D Sbjct: 182 TGALISYAVEAATILKDVDDPVRRALEGFAHDLGLAYQITDDLLDATGD 230 >gi|262277469|ref|ZP_06055262.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha proteobacterium HIMB114] gi|262224572|gb|EEY75031.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha proteobacterium HIMB114] Length = 292 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 85/205 (41%), Positives = 129/205 (62%), Gaps = 5/205 (2%) Query: 29 SHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86 S+ + Q D RL A+ Y L GGK IRS+LV +F+++ + + AA+EC+H YS Sbjct: 21 SYFKNQSADNRLYEAMEYGLFSGGKMIRSYLVQSTCKIFDIDEKKYIPIAAAVECVHSYS 80 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 LIHDDLPSMDN RRGK + H Y E TAI+AG+ LLT AFE+IS PK ++ ++I++++ Sbjct: 81 LIHDDLPSMDNDDFRRGKESTHKAYGEYTAILAGSSLLTLAFEMISDPKFEIDEDIKTKI 140 Query: 147 MLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 + +L+ + G G+ GGQ D ++ +D+ + +Q KTGALM F E +++H + Sbjct: 141 IHALSSSSGHLGIAGGQFFDLSLKKSEVDKETIIDMQNKKTGALMGFCTEVAPLLSHKKE 200 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 K + G +G++FQ+ DD LD Sbjct: 201 LAK-TFKDLGIKIGLLFQIVDDFLD 224 >gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522] gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522] Length = 295 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 102/236 (43%), Positives = 140/236 (59%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 +NG L E K+ID L ++ +Q L A+ Y+L GGK+IR L+ Sbjct: 2 INGTLKHFFDEEKKQIDNRLPHIIENLNIPVQ------LRDAMIYSLKAGGKRIRPMLLL 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +N V AIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+A Sbjct: 56 ATLRGYNKPLSHGYDVACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177 G+GLLTY+F++ISS L DN++ L+ ++ G +GM+GGQ+LD+Q E I + Q+ Sbjct: 116 GDGLLTYSFQLISS-SMLLPDNVKLLLIQKMSQAAGPEGMVGGQVLDMQGEGITLSVDQL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I KTG L+ + ESGAI+A S+NE+ L F ++LGI FQ+ DD+LD E D Sbjct: 175 QKIHHHKTGDLLAVSVESGAILAGVSENERISLTSFAKHLGIAFQIKDDILDVEGD 230 >gi|94497294|ref|ZP_01303865.1| Polyprenyl synthetase [Sphingomonas sp. SKA58] gi|94423157|gb|EAT08187.1| Polyprenyl synthetase [Sphingomonas sp. SKA58] Length = 302 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 95/200 (47%), Positives = 132/200 (66%), Gaps = 3/200 (1%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+R+A +GG K++R LV LF+++ +ALRVG AIECIH YSLIHDDLP+MD Sbjct: 39 RLYDAMRHAAIGGGKRLRPLLVQAACDLFHISRESALRVGLAIECIHVYSLIHDDLPAMD 98 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH +DE TAI+AG+ L AFE+++ +T +R +L+ +L G Sbjct: 99 DDDMRRGKPTVHKAFDEATAILAGDCLHDLAFEVLADAETHPDPFVRIELVKALATCSGP 158 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM GGQM+D++ E D V +Q +KTGAL+CF E+ AIMA Q + L + Sbjct: 159 AGMAGGQMMDLEAERTRFDLATVTRLQNLKTGALICFCVEAAAIMARLPQEARTGLHGYA 218 Query: 215 ENLGIIFQLADDLLDCEEDL 234 ++G+ FQ+ADDLLD E D+ Sbjct: 219 RDIGLAFQIADDLLDVEGDV 238 >gi|296116237|ref|ZP_06834855.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295977343|gb|EFG84103.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 295 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 86/196 (43%), Positives = 131/196 (66%), Gaps = 3/196 (1%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL+ A+RYA LGG K++R +LV E AS+F V A R A++E +H YSL+HDDLP+MD Sbjct: 32 RLIDAMRYATLGGGKRLRGYLVAEVASMFKVEEAGAYRAAASVEMLHAYSLVHDDLPAMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+P+ H ++DE TAI+AG+ L T AF I++ P T +R L+ +L G Sbjct: 92 DDDLRRGQPSTHRKFDEATAILAGDALQTMAFGILADPATHRDAGVRIDLVTTLAAASGA 151 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQM+D++ E + +V + +KTG L+ ++ E+GAI+ A+ + +ER+ +G Sbjct: 152 AGMVGGQMIDMEGEGRSLSLEEVARLHALKTGCLIRYSAEAGAILGQAAPDLRERIAAYG 211 Query: 215 ENLGIIFQLADDLLDC 230 +LG FQ+ADD+LD Sbjct: 212 RDLGAAFQVADDVLDA 227 >gi|225677225|ref|ZP_03788218.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590749|gb|EEH11983.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 263 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 131/212 (61%), Gaps = 9/212 (4%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+++ + ++L+SA+RY LL K IRSFLV + +FN + V AAIE Sbjct: 10 LIVEVNRLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H YSLIHDDLP MDN RR + + H ++DE TA++AG+ LLT AFE++SS + Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEK---- 125 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 R +++ L+ IG++GM+GGQ LDI +F ++ I MKT L +CE GAI+ + Sbjct: 126 -RCEIIKVLSQAIGIRGMVGGQALDIGADF---NKIKEIHLMKTAKLFAASCEIGAIIGN 181 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A +++ L +G NLG+IFQ DD+ D E+D Sbjct: 182 AIDKQRKALYNYGINLGLIFQAKDDIEDYEQD 213 >gi|304322149|ref|YP_003855792.1| putative geranyltranstransferase (farnesyl-diphosphate synthase) [Parvularcula bermudensis HTCC2503] gi|303301051|gb|ADM10650.1| putative geranyltranstransferase (farnesyl-diphosphate synthase) [Parvularcula bermudensis HTCC2503] Length = 296 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 87/193 (45%), Positives = 122/193 (63%), Gaps = 2/193 (1%) Query: 38 RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+ + AL GGK++R FLV E AS+F + AL AIE +HCYSLIHDDLP+MD Sbjct: 36 RLRAAMAHGALGGGKRLRPFLVLEAASIFGADDEAALPAATAIEMVHCYSLIHDDLPAMD 95 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + RRG+P+VH YDE AI+AG+GLLT AF +++ T +L+ L G Sbjct: 96 DADTRRGRPSVHKAYDEAIAILAGDGLLTDAFALLTEEGTYTAPTA-CRLVRELALAAGS 154 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 GM+GGQM+D+ + DE + IQ+ KTGAL+ A GAI+ A+ +++ LR + Sbjct: 155 GGMVGGQMMDLYPDGGDEAAIVGIQRRKTGALIEAAAVMGAIVGAAAPSDEAALRQYAAA 214 Query: 217 LGIIFQLADDLLD 229 +G FQ+ DD+LD Sbjct: 215 VGEAFQVVDDILD 227 >gi|170747046|ref|YP_001753306.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] gi|170653568|gb|ACB22623.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] Length = 323 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/231 (42%), Positives = 142/231 (61%), Gaps = 7/231 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 +L E + ++T L + L + RL+ A+R+A+LGG K++R FL E A + Sbjct: 26 RLTEVAGTVETFLVERLGPAVGPGEIARPPRLMEAMRHAVLGGGKRLRPFLAIETARMLG 85 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + AL GA +E +HCYSL+HDDLP+MD+ +RRGKPTVH YDE TAI+ G+ L T Sbjct: 86 GSEAAALAAGAGVELVHCYSLVHDDLPAMDDDDMRRGKPTVHKAYDEATAILVGDALQTL 145 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDETQVFMI 180 AFEI++ P Q +R+ L+L L GL GM+GGQ+LD+ E +D + Sbjct: 146 AFEIVADPAWQPDARVRADLVLGLARASGLGGMVGGQLLDLTAEGRFGAANMDVDDTLRM 205 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 Q MKTGA++ F+ E+GAI+ A ++++ L +G LG FQ+ADD+LD E Sbjct: 206 QAMKTGAILAFSVEAGAIVGGADKDQRAALLRYGLALGQAFQIADDILDRE 256 >gi|315498417|ref|YP_004087221.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48] gi|315416429|gb|ADU13070.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48] Length = 303 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 103/236 (43%), Positives = 138/236 (58%), Gaps = 9/236 (3%) Query: 2 NGGLPS---KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFL 57 N LP ++QE + + LD+LL + RL A+RYA LG GK++R F Sbjct: 7 NSDLPPLHERMQETADLVTMALDELLPRAEGF-----ESRLTEAMRYAALGPGKRLRPFF 61 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 E LF+ + LR A+ECIH YSL+HDDLP MD+ IRRG+ TVH YDE TA+ Sbjct: 62 ALETGRLFDADSQAVLRAACALECIHAYSLVHDDLPCMDDDDIRRGQLTVHRAYDEATAV 121 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 +AG+ L T AFEI++S T +R +L+ L G QGM GGQM+D+ D V Sbjct: 122 LAGDALQTVAFEILASEDTHEDPRVRVELISRLALASGAQGMAGGQMIDLIGVSDDLGGV 181 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +Q+MKTGAL+ A E I+A A + E L F ++LG+ +Q+ADDLLD E D Sbjct: 182 ARMQRMKTGALIVHAFEIPIIIADAPEKEANSLIHFAQDLGLAYQIADDLLDVEGD 237 >gi|149202564|ref|ZP_01879536.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035] gi|149143846|gb|EDM31880.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035] Length = 287 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 86/195 (44%), Positives = 119/195 (61%), Gaps = 8/195 (4%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 +RYA GGK+IR FLV E A L +V A+ AIE +H YSL+HDDLP+MDN +RR Sbjct: 32 MRYATQGGKRIRGFLVMESARLHDVPETAAIWPATAIEALHAYSLVHDDLPAMDNDDLRR 91 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G+PTVHI++DE TAI+ G+ L + AFE+++ P + +R+ L LSL G QGM+ G Sbjct: 92 GQPTVHIKWDEATAILVGDALQSLAFELVAHPDCGPAE-VRAGLTLSLARAAGGQGMVLG 150 Query: 163 QMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 Q LDI E ++ +Q KTGAL+ ++ +GA MAHA L + LG Sbjct: 151 QALDIAAETATSPLSLDEITTLQAGKTGALILWSATAGACMAHADMTP---LSTYARALG 207 Query: 219 IIFQLADDLLDCEED 233 + FQ+ DD++D D Sbjct: 208 LAFQIQDDVIDVTGD 222 >gi|154251236|ref|YP_001412060.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1] gi|154155186|gb|ABS62403.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1] Length = 302 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 97/230 (42%), Positives = 145/230 (63%), Gaps = 8/230 (3%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65 + L + +++ +LD LL + R+ A+RYA LGG K+ R FLV + A+LF Sbjct: 13 AGLATVAAKVEEMLDRLLPRVEGP-----EARIAEAMRYAALGGGKRFRPFLVAQSAALF 67 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V ALR AA EC+H YSL+HDDLP MD+ +R G P VH Q+DE TA++AG+ LLT Sbjct: 68 GVASEAALRAAAAAECVHIYSLVHDDLPCMDDDDLRHGLPAVHRQFDEATAVLAGDALLT 127 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183 AFEI++ P+T + +R +L+ L G GM+GGQ++D+ E +D + +Q++ Sbjct: 128 LAFEILADPETHERARVRIELVRRLAIASGAHGMVGGQIIDLTSEGRELDMGGITRLQQL 187 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ F+CE+GAI+ AS + L + ++G+ +Q+ADD+LD E D Sbjct: 188 KTGALISFSCEAGAILGRASPDALHALHAYAHDMGLAYQIADDILDAEGD 237 >gi|114769861|ref|ZP_01447471.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium HTCC2255] gi|114549566|gb|EAU52448.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium HTCC2255] Length = 291 Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 91/210 (43%), Positives = 137/210 (65%), Gaps = 13/210 (6%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 +Q Q ND + + IR+A+L GGK++R+FLV ++F V TA++ AIEC+H YSL+H Sbjct: 23 LQKQGNDLMSAPIRHAVLNGGKRLRAFLVIHSCNIFEVQKDTAIQAAIAIECLHAYSLVH 82 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIR-SQLM 147 DDLP MD+ +RRGKPTVH+++DE TA + G+ L AFE+I+S P T D IR +L+ Sbjct: 83 DDLPCMDDDELRRGKPTVHVKWDEATATLTGDALQALAFELIASLPNT---DAIRIVELL 139 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L G+QGM+ GQ DIQ E ++ + +Q+ KTGAL+ ++ SGAI+ S Sbjct: 140 KKLAKASGMQGMVLGQAQDIQAEKSEVNLNINDITSLQQNKTGALIEWSAISGAIL---S 196 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ +L + +++G+ FQ+ DD+LD E D Sbjct: 197 NHDDRKLLDYAKSIGLAFQIQDDILDIEGD 226 >gi|304394308|ref|ZP_07376231.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130] gi|303293748|gb|EFL88125.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130] Length = 300 Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 94/210 (44%), Positives = 141/210 (67%), Gaps = 4/210 (1%) Query: 27 TASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85 +A+ + Q +RL++A+R+ +L GGK++R FLV E A+LF V+ AL A+EC+H + Sbjct: 27 SAAEGERQRPERLVAAMRHGVLNGGKRVRPFLVVESAALFGVSLDDALPTACALECLHSF 86 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ L T AF+I++S ++ +R + Sbjct: 87 SLVHDDLPAMDDDDLRRGQPTVHKAFDEALAILAGDALSTLAFDILAS-RSSADAAVRCE 145 Query: 146 LMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L L G GM+GGQ+LDI +D + ++ +Q MKTGAL+ FACE+GA++ A Sbjct: 146 LTTMLARASGWGGMIGGQVLDIEAEDGAPTDAEIRTLQAMKTGALIRFACEAGAVLGGAD 205 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233 + LR +GE +G+ FQLADD+LD D Sbjct: 206 DAARAALRSYGETVGLAFQLADDILDVTAD 235 >gi|91762255|ref|ZP_01264220.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002] gi|91718057|gb|EAS84707.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002] Length = 290 Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 87/218 (39%), Positives = 131/218 (60%), Gaps = 3/218 (1%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 ++ I D L ++ Q L++A+ Y L GGKKIRS ++ + ++F +N+ T + Sbjct: 4 KLARIAKDTNLFLKQFIKGQKRTELIAAMEYGLFPGGKKIRSKILIDIGAIFKINYKTLI 63 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +GAA+ECIH YSLIHDDLP MD+ IRRGK + HI++ E TA++AGN LLT AFEI+ S Sbjct: 64 SIGAAVECIHAYSLIHDDLPCMDDDKIRRGKISTHIKFGESTAVLAGNSLLTMAFEILVS 123 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCF 191 +L + I+ L+ L+ G G+ GGQ LD+ E ++ + ++ KTG L F Sbjct: 124 SSLKLNEKIKVDLIKKLSETSGHLGIAGGQYLDLSFEKKKVSKSKIIDMEIKKTGKLFSF 183 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 C I+ S + + G N+G++FQ+ADDL+D Sbjct: 184 CCTVPVIIKRKSNTQIKFFENIGSNIGLLFQIADDLID 221 >gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1] gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1] Length = 294 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 88/194 (45%), Positives = 121/194 (62%), Gaps = 3/194 (1%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RY+LL GGK++R L C A+ A+EC+H YSLIHDDLP+MDN Sbjct: 32 LTGAMRYSLLIGGKRLRPILTLACCEAVGGALERAMNFACAMECVHTYSLIHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG PT H QY E TAI+AG+ LLT+AFE+ + P T + R +L+ L G Sbjct: 92 DDLRRGHPTCHRQYGEATAILAGDALLTHAFELAAKPVTGVLPEARLELIGELAMAAGTY 151 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQMLDIQ E ++ Q+ I KTGAL+ AC +GA + + ++ + L+ +GE Sbjct: 152 GMVGGQMLDIQGEKRPLELVQLQNIHIHKTGALIRVACLAGARLGGGTPDQVKHLKRYGE 211 Query: 216 NLGIIFQLADDLLD 229 LG+ FQ+ DD+LD Sbjct: 212 ALGLAFQITDDILD 225 >gi|110677933|ref|YP_680940.1| geranyltranstransferase [Roseobacter denitrificans OCh 114] gi|109454049|gb|ABG30254.1| geranyltranstransferase [Roseobacter denitrificans OCh 114] Length = 289 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 84/201 (41%), Positives = 126/201 (62%), Gaps = 11/201 (5%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 ++ A+ +A GGK++R FLV E A L ++ A+ AIE +H YSL+HDDLP MDN Sbjct: 29 IVEAMAHATSGGKRLRGFLVLETARLHDIAAGEAIWSATAIEALHAYSLVHDDLPCMDND 88 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG+PTVH ++D+ TA++AG+ L T AFE+++ P +R+ L LSL G QG Sbjct: 89 DMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASASAEVRADLALSLARASGAQG 148 Query: 159 MLGGQMLDIQDEF------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 M+ GQ LDI E +DE + +Q+ KTGAL+ ++ ++GA +A Q + L+ Sbjct: 149 MVLGQALDIAAETARAPLSLDE--ITRLQQGKTGALIGWSAQAGARLA---QADTAALKR 203 Query: 213 FGENLGIIFQLADDLLDCEED 233 + + LG+ FQ+ADD+LD D Sbjct: 204 YAQALGLAFQIADDILDVTGD 224 >gi|304570553|ref|YP_266034.2| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062] Length = 290 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 86/218 (39%), Positives = 131/218 (60%), Gaps = 3/218 (1%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 ++ I D L ++ Q L++A+ Y L GGKKIRS ++ + ++F +N+ T + Sbjct: 4 KLARIAKDTNLFLKQFIKGQKRTELIAAMEYGLFPGGKKIRSKILIDIGAIFKINYKTLI 63 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +GAA+ECIH YSLIHDDLP MD+ IRRGK + HI++ E TA++AGN LLT AFEI+ S Sbjct: 64 SIGAAVECIHAYSLIHDDLPCMDDDKIRRGKISTHIKFGESTAVLAGNSLLTMAFEILVS 123 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCF 191 ++ + I+ L+ L+ G G+ GGQ LD+ E ++ + ++ KTG L F Sbjct: 124 SSLKINEKIKVDLVKKLSETSGHLGIAGGQYLDLSFEKKKVSKSKIIDMEIKKTGKLFSF 183 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 C I+ S + + G N+G++FQ+ADDL+D Sbjct: 184 CCAVPVIIKRKSNTQIKFFENIGSNIGLLFQIADDLID 221 >gi|146292379|ref|YP_001182803.1| polyprenyl synthetase [Shewanella putrefaciens CN-32] gi|145564069|gb|ABP75004.1| farnesyl-diphosphate synthase [Shewanella putrefaciens CN-32] Length = 293 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 95/228 (41%), Positives = 136/228 (59%), Gaps = 8/228 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S +QE R+DT L Q S ++ +L +A++Y ALLGGK+IR FLV Sbjct: 2 LASTIQEYQLRVDTQLK----QRFSTLE-DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 T AFEI++ + + ++ +L G +GM GGQ +D+ D+ ID + + Sbjct: 117 QTLAFEIVTEAVSGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 MKTGAL+ A E I A+A +++ + + F +G+ FQ+ DD+LD Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMTFAHAVGLAFQVQDDILD 224 >gi|212636370|ref|YP_002312895.1| polyprenyl synthetase [Shewanella piezotolerans WP3] gi|212557854|gb|ACJ30308.1| Polyprenyl synthetase [Shewanella piezotolerans WP3] Length = 293 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 86/197 (43%), Positives = 125/197 (63%), Gaps = 3/197 (1%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + +L +A+++ AL+GGK+IR FLV + NV T AAIEC+H YSLIHDDLP+ Sbjct: 28 DPKLKAAMKHGALIGGKRIRPFLVYAIGEMLNVKLETLDSCAAAIECVHAYSLIHDDLPA 87 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRG+PTVHI YDE TAI+AG+ L AFEIIS P + + ++ +L + Sbjct: 88 MDDDALRRGQPTVHIAYDEATAILAGDALQALAFEIISEPIKNIAPSQNLAMVKALANAS 147 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM GGQ +D+ D+ I+ + + K+KTGAL+ A E I A + +E++ L Sbjct: 148 GYSGMCGGQAMDLSATDKQIELATLIQLHKLKTGALIRCAVEFAIIAAKINDDERQALVD 207 Query: 213 FGENLGIIFQLADDLLD 229 F + +G+ FQ+ DD+LD Sbjct: 208 FADAIGLAFQVQDDVLD 224 >gi|319425679|gb|ADV53753.1| Polyprenyl synthetase [Shewanella putrefaciens 200] Length = 293 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 95/228 (41%), Positives = 135/228 (59%), Gaps = 8/228 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S +QE R+DT L Q S ++ +L +A++Y ALLGGK+IR FLV Sbjct: 2 LASTIQEYQLRVDTQLK----QRFSTLE-DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 T AFEI++ + ++ +L G +GM GGQ +D+ D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 MKTGAL+ A E I A+A +++ + + F +G+ FQ+ DD+LD Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMTFAHAVGLAFQVQDDILD 224 >gi|294013329|ref|YP_003546789.1| geranyltranstransferase [Sphingobium japonicum UT26S] gi|292676659|dbj|BAI98177.1| geranyltranstransferase [Sphingobium japonicum UT26S] Length = 305 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 92/199 (46%), Positives = 131/199 (65%), Gaps = 3/199 (1%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+R+A + GGK++R LV + LFN++ +ALRVG A+ECIH YSL+HDDLP+MD Sbjct: 42 RLYEAMRHAAMDGGKRLRPLLVQAASDLFNISRESALRVGVAVECIHVYSLVHDDLPAMD 101 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH +DE TAI+AG+ L AFEI++ +T +R +L+ +L G Sbjct: 102 DDDMRRGKPTVHRAFDEATAILAGDCLHDLAFEILADEETHPDPFVRIELVKALAVASGT 161 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM GGQM+D++ E D V +Q++KTGAL+ ++ AIMA + RL + Sbjct: 162 SGMAGGQMMDLEAEKASFDLPTVTRLQQLKTGALIAVCVDAAAIMALIPPEGRMRLHGYA 221 Query: 215 ENLGIIFQLADDLLDCEED 233 ++G+ FQ+ADDLLD E D Sbjct: 222 RDIGLAFQIADDLLDVEGD 240 >gi|83312002|ref|YP_422266.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] gi|82946843|dbj|BAE51707.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] Length = 301 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 105/237 (44%), Positives = 151/237 (63%), Gaps = 8/237 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ L L S+ +++ LD LL + S + R+ A+RY L GGK++R FLV Sbjct: 6 MSPRLTEALTVVSQAVNSELDRLLPVSESP-----DSRVHEAMRYVTLDGGKRLRPFLVM 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + ASLFNV A+RV AIE IHCYSL+HDDLP MD+ +RRG+PT H +DE TA++A Sbjct: 61 QSASLFNVAESAAIRVACAIEMIHCYSLVHDDLPCMDDDDLRRGRPTCHKAFDEATALLA 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLT AFE++ +P T +R +L+ L H G QGM+GGQM+D+Q +D + Sbjct: 121 GDALLTKAFEVLVNPATHADPAVRCELVADLAHASGGQGMVGGQMIDLQAHTLDLDVAGI 180 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 +Q++KTG L F+CE+GA++ A + LR + +LG+ FQ+ADD+LD E D+ Sbjct: 181 TRLQQLKTGRLFSFSCEAGAVLGKAHGELRLALRNYAHDLGLAFQIADDILDVEGDV 237 >gi|83942134|ref|ZP_00954596.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36] gi|83847954|gb|EAP85829.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36] Length = 312 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 86/196 (43%), Positives = 124/196 (63%), Gaps = 9/196 (4%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+RYA+ GGK +R+FLV E A L V A AIE +H YSL+HDD+P MD+ +R Sbjct: 57 AMRYAVTGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDDDALR 116 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG+PTVH+++DE TA++AG+ L T AFE++++ T D R L+ L G++GM+G Sbjct: 117 RGQPTVHVKWDEATAVLAGDALQTLAFELVAA--TGCGDAERVALVTGLARAAGVRGMVG 174 Query: 162 GQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ +DI E + Q+ +Q KTGAL+ +A +G +MA ++ LR + NL Sbjct: 175 GQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGPVMA---GDDAAALRSYARNL 231 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ADD+LD E D Sbjct: 232 GLAFQIADDILDVEGD 247 >gi|162147645|ref|YP_001602106.1| geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5] gi|209542274|ref|YP_002274503.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161786222|emb|CAP55804.1| Geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5] gi|209529951|gb|ACI49888.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 311 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 95/229 (41%), Positives = 137/229 (59%), Gaps = 8/229 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 L S L + I+ +D LL R++ A+RYA LGG K++R +L E AS Sbjct: 20 LRSSLSNRATAIEAAIDSLLPPVPGA-----EGRVVDAMRYATLGGGKRLRGYLTAEVAS 74 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF V A RV A++E +H YSL+HDDLP+MDN +RRG+P+ H ++DE TAI+AG+ L Sbjct: 75 LFGVEPARAYRVAASVEMLHAYSLVHDDLPAMDNDDLRRGQPSTHRKFDEATAILAGDAL 134 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 T AFEI++ T IR L+ +L G GM+GGQM+D+ E + +V + Sbjct: 135 QTMAFEILTDTATHPSATIRIGLVAALAAASGAAGMVGGQMIDMDGEGRALSLPEVERLH 194 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +KTG L+ +A E+GAI+ A + R+ +G +LG FQ+ADD+LD Sbjct: 195 ALKTGCLIRYAAEAGAILGDADLPARARIAAYGRDLGAAFQIADDVLDA 243 >gi|85373942|ref|YP_458004.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594] gi|84787025|gb|ABC63207.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594] Length = 305 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 97/235 (41%), Positives = 141/235 (60%), Gaps = 8/235 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S L ++ ID + D +LL + L+ A+RY A+ GGK++R LV A Sbjct: 14 LSSALNRIARDIDAVFD-VLLPVPDDTRAP----LVEAMRYSAMDGGKRVRPLLVVATAE 68 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + V+ ALRVG A+E IH YSLIHDDLP MD+ +RRGK T+H YDE TA++AG+ L Sbjct: 69 MLGVSRDPALRVGCAVEAIHVYSLIHDDLPCMDDDELRRGKATLHKAYDEATAVLAGDSL 128 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181 AFEI++ +T +++L+ +L G+ GM GGQM+D+ E D + +Q Sbjct: 129 HALAFEILTDDETTPDPFTQAELVRTLAAASGMAGMAGGQMMDMAAESADYDLHTITRLQ 188 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++KTGAL+ + E GAI+A + + LR + ++G+ FQ+ADDLLD E D K Sbjct: 189 QLKTGALLAASVEMGAILAKIPREGRSHLRAYARDIGLAFQIADDLLDAEGDEEK 243 >gi|126173596|ref|YP_001049745.1| polyprenyl synthetase [Shewanella baltica OS155] gi|125996801|gb|ABN60876.1| farnesyl-diphosphate synthase [Shewanella baltica OS155] Length = 293 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 131/228 (57%), Gaps = 8/228 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S +QE +R+D L L T H Q L +A+ Y ALLGGK+IR FLV Sbjct: 2 LVSAIQEYQQRVDNQLKQRL-STLEHTAPQ----LKAAMTYGALLGGKRIRPFLVYSVGR 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 T AFEI++ + ++ L G +GM GGQ +D+ D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 MKTGAL+ A E I A+A +++ + F +G+ FQ+ DD+LD Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILD 224 >gi|114326884|ref|YP_744041.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1] gi|114315058|gb|ABI61118.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1] Length = 309 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 91/231 (39%), Positives = 141/231 (61%), Gaps = 9/231 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L L + ++ LD LL + R++ A+RYA+L GGK++R+FLV E A+ Sbjct: 17 LKEALTRRAHEVEAALDRLL-----PVPPGPESRVVEAMRYAVLNGGKRLRAFLVLESAA 71 Query: 64 LFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF+ + +R A++E +H YSL+HDDLP+MD+ +RRGKP+ H +DE TAI+AG+ Sbjct: 72 LFDGAAAESGVRAAASVEMLHAYSLVHDDLPAMDDDDLRRGKPSAHRAFDEATAILAGDA 131 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180 L T AFE+++ T R L+L+L +G GM+GGQM+D+ E + QV + Sbjct: 132 LQTSAFELLADAATHPDPAARCALVLALARAVGADGMVGGQMIDMASEGRALTAEQVGRL 191 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 +KTG L+ ++ E+G I+ A+ ++E L +G +LG FQ+ DD+LD E Sbjct: 192 HALKTGRLIQYSAEAGGILGAATPAQQEALASYGRDLGAAFQIVDDILDTE 242 >gi|83953189|ref|ZP_00961911.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. NAS-14.1] gi|83842157|gb|EAP81325.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. NAS-14.1] Length = 301 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 86/196 (43%), Positives = 124/196 (63%), Gaps = 9/196 (4%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+RYA+ GGK +R+FLV E A L V A AIE +H YSL+HDD+P MD+ +R Sbjct: 46 AMRYAVTGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDDDALR 105 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG+PTVH+++DE TA++AG+ L T AFE++++ T D R L+ L G++GM+G Sbjct: 106 RGQPTVHVKWDEATAVLAGDALQTLAFELVAA--TGCGDAERVALVTGLARAAGVRGMVG 163 Query: 162 GQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ +DI E + Q+ +Q KTGAL+ +A +G +MA ++ LR + NL Sbjct: 164 GQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGPVMA---GDDAAALRSYARNL 220 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ADD+LD E D Sbjct: 221 GLAFQIADDILDVEGD 236 >gi|73667184|ref|YP_303200.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake] gi|72394325|gb|AAZ68602.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake] Length = 283 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 93/216 (43%), Positives = 130/216 (60%), Gaps = 4/216 (1%) Query: 23 LLLQTASHMQTQHN-DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 LL+Q M ++N D LL++IRY++ GK IR FLV A +F+VN L V AA+E Sbjct: 23 LLIQKLESMLPENNQDILLTSIRYSIFSPGKHIRPFLVNAVAQMFDVNVDRTLPVSAAVE 82 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP MDN IRRG+ + H +++E AI+ G+ LLT AFEI+S+ Sbjct: 83 IIHVYSLIHDDLPGMDNEEIRRGQASSHKKFNEAVAILTGDALLTLAFEILSTINE--SP 140 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 IR +++ +L H IG QGM+ GQ+LD + D ++ I +KT CE G I+ Sbjct: 141 LIRCRIIKTLAHAIGYQGMIQGQILDTETIAKDINEIQNIHVLKTAQFFSAICELGGILG 200 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +AS + L +G NLG FQ+ DD+ D ++D K Sbjct: 201 NASNIQLNALANYGLNLGHAFQIKDDIADEDQDKSK 236 >gi|294139891|ref|YP_003555869.1| geranyltranstransferase [Shewanella violacea DSS12] gi|293326360|dbj|BAJ01091.1| geranyltranstransferase [Shewanella violacea DSS12] Length = 293 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 132/219 (60%), Gaps = 8/219 (3%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA 72 +R+D+ L+ ++ QT + +LL+AI++ ALLGGK+IR FLV + N+ Sbjct: 11 QRVDSQLEKII-----DAQTITDPKLLAAIKHGALLGGKRIRPFLVYAIGDMLNIPLKKL 65 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AAIEC+H YSLIHDDLP+MD+ +RRG+PTVH+ +DE TAI+AG+ L FEII Sbjct: 66 DSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEATAILAGDALQALGFEIIC 125 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190 P ++ + ++ +L G GM GGQ +D+ D+ ID + + K+KTGAL+ Sbjct: 126 EPIDGIEPSQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTKLHKLKTGALIR 185 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A E I A S E+ L F + +G+ FQ+ DD+LD Sbjct: 186 CAVELPMIAAQVSPEEQTLLLEFADTIGLAFQVQDDVLD 224 >gi|58038726|ref|YP_190690.1| dimethylallyltransferase [Gluconobacter oxydans 621H] gi|58001140|gb|AAW60034.1| Dimethylallyltransferase [Gluconobacter oxydans 621H] Length = 301 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 96/218 (44%), Positives = 137/218 (62%), Gaps = 8/218 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALR 74 I++ +D LL M L+ A+RYA LGG K++R FL E A+LF + ALR Sbjct: 21 IESTIDTLL-----PMVPGDESVLIEAMRYAALGGGKRLRGFLAVEVATLFGADRKAALR 75 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V A++E +H YSL+HDDLPSMD+ +RRG+P+ H Q+DE AI+AG+ L T AFEI+ P Sbjct: 76 VAASVELLHAYSLVHDDLPSMDDDDLRRGQPSTHKQFDEAIAILAGDALQTRAFEILVEP 135 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFA 192 +T +R+ L L+L G GM+GGQ++DI+ E + QV + +KTGAL+ +A Sbjct: 136 ETSPNATVRANLALALAQASGSAGMVGGQVIDIRGEGRALPLDQVRRLHALKTGALIRYA 195 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ESGAI+A + + +G +LG FQ+ADD+LD Sbjct: 196 AESGAILADVDDARRAAIVAYGRDLGTAFQVADDVLDS 233 >gi|120599627|ref|YP_964201.1| polyprenyl synthetase [Shewanella sp. W3-18-1] gi|120559720|gb|ABM25647.1| farnesyl-diphosphate synthase [Shewanella sp. W3-18-1] Length = 293 Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 94/228 (41%), Positives = 134/228 (58%), Gaps = 8/228 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S +QE R+DT L Q S ++ +L +A++Y ALLGGK+IR FLV Sbjct: 2 LASTIQEYQLRVDTQLK----QRFSTLE-DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 T AFEI++ + ++ +L G +GM GGQ +D+ D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 MKTGAL+ A E I +A +++ + + F +G+ FQ+ DD+LD Sbjct: 177 NMKTGALISCAVELALIAVNAPKDQYQTMMTFAHAVGLAFQVQDDILD 224 >gi|144900826|emb|CAM77690.1| geranyltranstransferase [Magnetospirillum gryphiswaldense MSR-1] Length = 296 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 96/199 (48%), Positives = 137/199 (68%), Gaps = 3/199 (1%) Query: 38 RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 R+ A+RY AL GGK++R FL + ASLFNV+ ALRVG A+E +HCYSLIHDDLP MD Sbjct: 33 RVHDAMRYSALDGGKRLRPFLTVQAASLFNVSPAAALRVGCALEMVHCYSLIHDDLPCMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PT H Q+DE TA++AG+ L + AFE++++ T +R +L+ L H G Sbjct: 93 DDDLRRGRPTCHRQFDEATALLAGDALQSRAFEVLAAESTHPDPAVRCELVWQLAHAAGG 152 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQM+D+Q +D + +Q+MKTG L+ FACE+GAI+ A + + L+ + Sbjct: 153 MGMVGGQMVDLQAAQLTMDMADITRLQQMKTGRLIGFACEAGAILGKAPSSLRLALKNYA 212 Query: 215 ENLGIIFQLADDLLDCEED 233 +LG+ FQ+ADDLLD + D Sbjct: 213 HDLGLAFQIADDLLDVQGD 231 >gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1] gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1] Length = 315 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 86/201 (42%), Positives = 126/201 (62%), Gaps = 9/201 (4%) Query: 40 LSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 + A+RY+LL GGK++R L A + L V A+ECIH YSLIHDDLP+MDN Sbjct: 52 IEAMRYSLLAGGKRVRPILCLAAAEAVGSDPKPLLPVAGALECIHTYSLIHDDLPAMDND 111 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTHNIGL 156 +RRG PT H ++ E AI+AG+GLL++AFE+++ P + +QL L ++ +G Sbjct: 112 DLRRGMPTSHKKFGEAAAILAGDGLLSFAFELLARPLGEHGPGPAAQLRLLATVAAAVGP 171 Query: 157 QGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 +GM+GGQ+LDI+ E +DE Q I + KTGAL+ A ++GAI AS+ + + L Sbjct: 172 RGMVGGQVLDIEAEGRRLELDELQ--QIHRHKTGALITAAVQAGAIGGGASETQLQALTR 229 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G+ G+ FQ+ DDLL+ D Sbjct: 230 YGQQTGLAFQIVDDLLNVTSD 250 >gi|58617311|ref|YP_196510.1| putative geranyltranstransferase [Ehrlichia ruminantium str. Gardel] gi|58416923|emb|CAI28036.1| Possible geranyltranstransferase [Ehrlichia ruminantium str. Gardel] Length = 276 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 89/206 (43%), Positives = 122/206 (59%), Gaps = 3/206 (1%) Query: 32 QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + H+D LL++++Y+L GK IR FLV A +FNVN L V AIE IH YSLIHD Sbjct: 26 KADHDDILLASMKYSLFTPGKYIRPFLVNASAQIFNVNIDRTLPVSVAIELIHVYSLIHD 85 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP MDN RRG+ + H ++ E AI+ G+ LLT AFE++S+ IR +++ L Sbjct: 86 DLPGMDNEDTRRGQLSSHKKFTEAIAILTGDALLTLAFEVLSTINES--PYIRCRIIQVL 143 Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 T IG QGM+ GQ+LD + D + + +KT L ACE G I+ AS E L Sbjct: 144 TQAIGYQGMIKGQVLDTETIAKDINDIKTMHTLKTACLFSAACEVGGILGGASDTELNSL 203 Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236 + +G NLG FQ+ DD+ D +D+ K Sbjct: 204 KNYGLNLGFAFQIKDDIADICKDISK 229 >gi|57239293|ref|YP_180429.1| putative geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden] gi|58579257|ref|YP_197469.1| putative geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden] gi|57161372|emb|CAH58295.1| putative geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden] gi|58417883|emb|CAI27087.1| Possible geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden] Length = 276 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 89/206 (43%), Positives = 122/206 (59%), Gaps = 3/206 (1%) Query: 32 QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + H+D LL++++Y+L GK IR FLV A +FNVN L V AIE IH YSLIHD Sbjct: 26 KADHDDILLASMKYSLFTPGKYIRPFLVNASAQIFNVNIDRTLPVSVAIELIHVYSLIHD 85 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP MDN RRG+ + H ++ E AI+ G+ LLT AFE++S+ IR +++ L Sbjct: 86 DLPGMDNEDTRRGQLSSHKKFTEAIAILTGDALLTLAFEVLSTINES--PYIRCRIIQVL 143 Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 T IG QGM+ GQ+LD + D + + +KT L ACE G I+ AS E L Sbjct: 144 TQAIGYQGMIKGQVLDTETIAKDINDIKTMHTLKTACLFSAACEVGGILGGASDTELNSL 203 Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236 + +G NLG FQ+ DD+ D +D+ K Sbjct: 204 KNYGLNLGFAFQIKDDIADICKDISK 229 >gi|170727812|ref|YP_001761838.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908] gi|169813159|gb|ACA87743.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908] Length = 293 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 85/201 (42%), Positives = 124/201 (61%), Gaps = 3/201 (1%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q+ + +LL+A+++ AL+GGK+IR FLV + NV AAIECIH YSLIHD Sbjct: 24 QSVTDSQLLAAMKHGALIGGKRIRPFLVYAIGEMLNVPQEKLDAAAAAIECIHAYSLIHD 83 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP+MD+ +RRG+PTVH+ +DE TAI+AG+ L AF+I+S P L ++ +L Sbjct: 84 DLPAMDDDALRRGQPTVHVAFDEATAILAGDALQALAFDILSQPIDGLTPTQNLAMVRAL 143 Query: 151 THNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G GM GGQ +D+ D+ ID + + K+KTGAL+ A E I A ++E+ Sbjct: 144 AKASGYSGMCGGQAMDLNATDKQIDLATLTQLHKLKTGALIRCAVELPMIAADLPKDEQA 203 Query: 209 RLRCFGENLGIIFQLADDLLD 229 L F + +G+ FQ+ DD++D Sbjct: 204 LLMTFADAVGLAFQVQDDVID 224 >gi|119775569|ref|YP_928309.1| geranyltranstransferase [Shewanella amazonensis SB2B] gi|119768069|gb|ABM00640.1| farnesyl-diphosphate synthase [Shewanella amazonensis SB2B] Length = 293 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 133/227 (58%), Gaps = 14/227 (6%) Query: 9 LQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASL 64 L + R+D +L D L QTA ++ +A+R+ AL+GGK+IR FLV L Sbjct: 6 LADCQSRVDAVLAAHIDALPQTAPALK--------AAMRHGALIGGKRIRPFLVYAVGEL 57 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 V+ R+ AA+EC+H YSLIHDDLP+MD+ +RRGKPTVHI +DE TAI+AG+ L Sbjct: 58 LGVDKAKLDRLAAAVECVHAYSLIHDDLPAMDDDNLRRGKPTVHIAFDEATAILAGDALQ 117 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182 T AFEIIS L + ++ +L G GM GGQ LD+ E I ++ + Sbjct: 118 TLAFEIISESDAGLAPKAQVAMIAALARASGYLGMCGGQALDLAGEGKSISLDELTRLHN 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KTGAL+ A E I A AS + LR + + +G+ FQ+ DD+LD Sbjct: 178 LKTGALIRAAVELALIAADASDADTAALRAYADAIGLAFQVQDDILD 224 >gi|254488785|ref|ZP_05101990.1| geranyltranstransferase [Roseobacter sp. GAI101] gi|214045654|gb|EEB86292.1| geranyltranstransferase [Roseobacter sp. GAI101] Length = 301 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/202 (43%), Positives = 127/202 (62%), Gaps = 9/202 (4%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + ++ A+RYA+ GGK +R+FLV E A L V A AIE +H YSL+HDD+P M Sbjct: 40 DGQIAEAMRYAVTGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCM 99 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRG+PTVH+++DEVTA++AG+ L AFE+ + +T D R L+ L H G Sbjct: 100 DNDDLRRGQPTVHVKWDEVTAVLAGDALQALAFELAA--QTGCSDAGRVALVAGLAHASG 157 Query: 156 LQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 ++GM+GGQ LDI E Q+ +Q KTGAL+ +A +G +MA +++ L+ Sbjct: 158 VRGMVGGQALDIAAESASVPLTLDQITTLQAGKTGALIEWAATAGPVMA---RDDPRPLQ 214 Query: 212 CFGENLGIIFQLADDLLDCEED 233 + +LG+ FQ+ADD+LD E D Sbjct: 215 RYARDLGLAFQIADDILDIEGD 236 >gi|88859185|ref|ZP_01133826.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas tunicata D2] gi|88819411|gb|EAR29225.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas tunicata D2] Length = 296 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 109/231 (47%), Positives = 144/231 (62%), Gaps = 16/231 (6%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69 EN R++ +LD LL Q QT LL+A RY+LL GGK++R +V +F N Sbjct: 9 ENQLRVEGVLDTLLTQPMITDQT-----LLAASRYSLLNGGKRMRPCMVYVTGEIFGANP 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 V AAIECIH YSL+HDDLP+MD+ +RRG PT HI YDE TAI+AG+ L T+AFE Sbjct: 64 DDLDLVAAAIECIHSYSLVHDDLPAMDDDDLRRGMPTCHIAYDEATAILAGDALQTFAFE 123 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 I+SS K + I +Q ++L N+ GL+GM GGQ LDI I+ TQ+ I ++ Sbjct: 124 ILSSSKFK---TINAQQQVALIANLASASGLRGMCGGQALDIAATNCAINLTQLEQIHQL 180 Query: 184 KTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ A GAI A + E + L+ FGEN+G+ FQ+ DD+LD E D Sbjct: 181 KTGALLTSAILMGAICAPKTTPEILQNLKIFGENIGLAFQVQDDILDIEGD 231 >gi|85703102|ref|ZP_01034206.1| farnesyl diphosphate synthase [Roseovarius sp. 217] gi|85672030|gb|EAQ26887.1| farnesyl diphosphate synthase [Roseovarius sp. 217] Length = 287 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 83/195 (42%), Positives = 118/195 (60%), Gaps = 8/195 (4%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 +RYA GGK+IR FL+ E A L V +AL AIE +H YSL+HDDLP+MDN +RR Sbjct: 32 MRYATQGGKRIRGFLLMESARLHAVPETSALWPATAIEALHAYSLVHDDLPAMDNDDLRR 91 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G+PTVH+++DE TAI+ G+ L + AFE+++ P +R+ L L+L G QGM+ G Sbjct: 92 GQPTVHVKWDEATAILVGDALQSLAFELVAHPDCG-PAAVRADLTLTLARAAGGQGMVLG 150 Query: 163 QMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 Q LDI E ++ +Q KTGAL+ ++ +GA MA A + L + LG Sbjct: 151 QALDIAAETATTPLSLDEITTLQAGKTGALILWSATAGARMAMA---DSAPLSTYARALG 207 Query: 219 IIFQLADDLLDCEED 233 + FQ+ DD++D D Sbjct: 208 LAFQIQDDVIDVTGD 222 >gi|254419553|ref|ZP_05033277.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3] gi|196185730|gb|EDX80706.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3] Length = 301 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 89/195 (45%), Positives = 122/195 (62%), Gaps = 1/195 (0%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA LG GK++R F E A LFN++ + LR A+EC+H YSL+HDDLP MD Sbjct: 39 RLTEAMRYAALGPGKRLRPFFALEAARLFNIDERSVLRAACALECVHAYSLVHDDLPCMD 98 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PTVH YDE TA++AG+ L T AF+II T +R +L L+ G Sbjct: 99 DDDMRRGRPTVHRAYDEATAVLAGDALQTAAFDIILHEDTHEDAVVRCELAARLSMASGA 158 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 +GM GGQM+D+ D V +Q++KTGAL +A E I+A AS + L F + Sbjct: 159 RGMAGGQMIDLLGVRDDLGGVARMQRLKTGALFAYAFEIPLIIAEASAQHQHALISFAHD 218 Query: 217 LGIIFQLADDLLDCE 231 +G+ +Q+ DDLLD E Sbjct: 219 VGLAYQIVDDLLDAE 233 >gi|149184810|ref|ZP_01863128.1| Polyprenyl synthetase [Erythrobacter sp. SD-21] gi|148832130|gb|EDL50563.1| Polyprenyl synthetase [Erythrobacter sp. SD-21] Length = 296 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 90/202 (44%), Positives = 128/202 (63%), Gaps = 3/202 (1%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL+ A+RYA +GG K++R LV A LF V+ A+ G A+E IH YSLIHDDLP MD Sbjct: 33 RLVEAMRYAAIGGGKRVRPLLVCATAKLFGVDRDAAVAAGCAVEAIHAYSLIHDDLPCMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +R GKPT+H YDE TA++AG+ L AF+I++ P +R++L+ +L G Sbjct: 93 DDDLRHGKPTLHKVYDEATAVLAGDCLHALAFDILTMPGISNDPFVRAELVATLAKASGH 152 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM GGQM+DI +E D QV +Q++KTGAL+ + E GA++ + LR + Sbjct: 153 EGMAGGQMMDIVSDEEEYDIRQVTRLQQLKTGALLAASVEMGAVLGKLPPEGRTHLRAYA 212 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 ++G+ FQ+ADDLLD E D K Sbjct: 213 RDIGLAFQIADDLLDVEGDETK 234 >gi|188581709|ref|YP_001925154.1| polyprenyl synthetase [Methylobacterium populi BJ001] gi|179345207|gb|ACB80619.1| Polyprenyl synthetase [Methylobacterium populi BJ001] Length = 320 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 103/239 (43%), Positives = 145/239 (60%), Gaps = 11/239 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60 G +L + ++T L DLL T + RL+ A+R+A+LGG K++R FL E Sbjct: 17 TGDFTHRLAGVADTVETFLVDLLGPTLQTGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + AL GA +E +HCYSL+HDDLP+MD+ +RRGKPTVH YDE TAI+ G Sbjct: 77 TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--------I 172 + L T AFE+ + P+ Q IR++L+L L GL GM+GGQ+LD+ E I Sbjct: 137 DALQTLAFEVTADPRWQPDPMIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPADMDI 196 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 D+T +Q MKTGA++ F+ E+GA++ A E+ L +G+ LG FQ+ADD+LD E Sbjct: 197 DDT--LRMQAMKTGAILAFSVEAGALVGGAGAEERAALLRYGKALGQAFQVADDILDRE 253 >gi|46015555|pdb|1RTR|A Chain A, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate Synthase gi|46015556|pdb|1RTR|B Chain B, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate Synthase Length = 301 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 13 SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 +K ID + ++L + S M TQ + +L ++ GGK+IR L+ N + Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+I Sbjct: 64 GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 SS +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 182 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 FA S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 183 TFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|57650478|ref|YP_186407.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL] gi|87160564|ref|YP_494166.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195328|ref|YP_500132.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221639|ref|YP_001332461.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509750|ref|YP_001575409.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140058|ref|ZP_03564551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258451179|ref|ZP_05699214.1| geranyltranstransferase [Staphylococcus aureus A5948] gi|262049107|ref|ZP_06021984.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30] gi|262051188|ref|ZP_06023412.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3] gi|282924770|ref|ZP_06332437.1| geranyltranstransferase [Staphylococcus aureus A9765] gi|284024581|ref|ZP_06378979.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 132] gi|294848552|ref|ZP_06789298.1| geranyltranstransferase [Staphylococcus aureus A9754] gi|304380890|ref|ZP_07363550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|57284664|gb|AAW36758.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL] gi|87126538|gb|ABD21052.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202886|gb|ABD30696.1| geranyltranstransferase, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374439|dbj|BAF67699.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368559|gb|ABX29530.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257861234|gb|EEV84047.1| geranyltranstransferase [Staphylococcus aureus A5948] gi|259160825|gb|EEW45845.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3] gi|259162776|gb|EEW47341.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30] gi|269941012|emb|CBI49396.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus TW20] gi|282592777|gb|EFB97783.1| geranyltranstransferase [Staphylococcus aureus A9765] gi|294824578|gb|EFG41001.1| geranyltranstransferase [Staphylococcus aureus A9754] gi|304340617|gb|EFM06551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198784|gb|EFU29112.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus CGS01] gi|329314199|gb|AEB88612.1| Geranyltranstransferase [Staphylococcus aureus subsp. aureus T0131] gi|329728330|gb|EGG64767.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21189] Length = 293 Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 13 SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 +K ID + ++L + S M TQ + +L ++ GGK+IR L+ N + Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+I Sbjct: 64 GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 SS +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 182 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 FA S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 183 TFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|152999876|ref|YP_001365557.1| polyprenyl synthetase [Shewanella baltica OS185] gi|160874501|ref|YP_001553817.1| polyprenyl synthetase [Shewanella baltica OS195] gi|217974160|ref|YP_002358911.1| polyprenyl synthetase [Shewanella baltica OS223] gi|151364494|gb|ABS07494.1| Polyprenyl synthetase [Shewanella baltica OS185] gi|160860023|gb|ABX48557.1| Polyprenyl synthetase [Shewanella baltica OS195] gi|217499295|gb|ACK47488.1| Polyprenyl synthetase [Shewanella baltica OS223] gi|315266739|gb|ADT93592.1| Polyprenyl synthetase [Shewanella baltica OS678] Length = 293 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 94/228 (41%), Positives = 133/228 (58%), Gaps = 8/228 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S +QE +R+D + L Q S ++ +L +A+ Y ALLGGK+IR FLV Sbjct: 2 LVSAIQEYQQRVD----NQLKQRFSTLE-DTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 T AFEI++ + ++ L G +GM GGQ +D+ D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 MKTGAL+ A E I A+A +++ + F +G+ FQ+ DD+LD Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILD 224 >gi|302751353|gb|ADL65530.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|320140593|gb|EFW32447.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MRSA131] gi|320144130|gb|EFW35899.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MRSA177] Length = 288 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 13 SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 +K ID + ++L + S M TQ + +L ++ GGK+IR L+ N + Sbjct: 2 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 58 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+I Sbjct: 59 GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 118 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 SS +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ Sbjct: 119 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 177 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 FA S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 178 TFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224 >gi|283470800|emb|CAQ50011.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Staphylococcus aureus subsp. aureus ST398] Length = 293 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 13 SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 +K ID + ++L + S M TQ + +L ++ GGK+IR L+ N H Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTKHEL 63 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+I Sbjct: 64 GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 SS +L D ++ +++ L+ G GM+GGQMLD+Q E I+ + MI K KTGAL+ Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPINLETLEMIHKTKTGALL 182 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 FA S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 183 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|163760025|ref|ZP_02167109.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43] gi|162282983|gb|EDQ33270.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43] Length = 305 Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 102/198 (51%), Positives = 138/198 (69%), Gaps = 3/198 (1%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+R+ +L GGK++R FLV E A + ALRV AA+ECIHCYSL+HDDLP+MD+ Sbjct: 43 LILAMRHGVLNGGKRLRPFLVIETARMLGAPEDAALRVAAALECIHCYSLVHDDLPAMDD 102 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+PTVHI +DE TAI+AG+ LLT AF++IS+P+T L + R +L+ +L+ G+ Sbjct: 103 DDLRRGQPTVHIAFDEATAILAGDALLTLAFDVISAPETDLPADARLRLVNALSRAAGVG 162 Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD+ E + DE + +Q MKTGAL+ FAC +GAI A R+ FGE Sbjct: 163 GMVGGQALDLAAERVSPDEAGIVKLQAMKTGALLRFACAAGAIAAGCDDAIVARVTRFGE 222 Query: 216 NLGIIFQLADDLLDCEED 233 +G+ FQLADDLLD D Sbjct: 223 IIGLAFQLADDLLDVTSD 240 >gi|67906634|gb|AAY82729.1| predicted geranyltranstransferase [uncultured bacterium eBACmed86H08] Length = 287 Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 84/219 (38%), Positives = 139/219 (63%), Gaps = 4/219 (1%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 K+I+ I D+ + ++ Q L++++ Y L GGKKIRS ++ + +F+V + Sbjct: 3 KKINKIGKDINKFLKNFLKKQKRTELITSMNYGLFPGGKKIRSKIIIDVGKIFSVPYHHL 62 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +RVGAA+ECIH YSLIHDDLP MDN +RRGK + H ++ E TA++AGN LLT AFEI+S Sbjct: 63 IRVGAAVECIHAYSLIHDDLPCMDNDDLRRGKLSTHKKFGESTAVLAGNSLLTLAFEILS 122 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMC 190 ++ + +++L+ SL++ G G+ GGQ LD+ + + + + ++ +Q KTG L Sbjct: 123 EKNFKINETKKNKLINSLSNTSGHLGIAGGQYLDLNFEKKRVSKKKIIDMQLNKTGKLFS 182 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 F+ + I+A+ S + + + G ++G++FQ+ DD LD Sbjct: 183 FSTIAPLIIANKSA-KINQFKRIGLDIGLLFQIVDDFLD 220 >gi|49483771|ref|YP_040995.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425647|ref|ZP_05602071.1| ispA [Staphylococcus aureus subsp. aureus 55/2053] gi|257428308|ref|ZP_05604706.1| ispA [Staphylococcus aureus subsp. aureus 65-1322] gi|257430945|ref|ZP_05607325.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 68-397] gi|257433634|ref|ZP_05609992.1| ispA protein [Staphylococcus aureus subsp. aureus E1410] gi|257436547|ref|ZP_05612591.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876] gi|282904104|ref|ZP_06311992.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160] gi|282905931|ref|ZP_06313786.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908841|ref|ZP_06316659.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911160|ref|ZP_06318962.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914329|ref|ZP_06322115.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899] gi|282919298|ref|ZP_06327033.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427] gi|282924623|ref|ZP_06332291.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101] gi|283958286|ref|ZP_06375737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus A017934/97] gi|293503404|ref|ZP_06667251.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 58-424] gi|293510420|ref|ZP_06669126.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809] gi|293530960|ref|ZP_06671642.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015] gi|295428100|ref|ZP_06820732.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590934|ref|ZP_06949572.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8] gi|49241900|emb|CAG40594.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271341|gb|EEV03487.1| ispA [Staphylococcus aureus subsp. aureus 55/2053] gi|257275149|gb|EEV06636.1| ispA [Staphylococcus aureus subsp. aureus 65-1322] gi|257278375|gb|EEV09011.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 68-397] gi|257281727|gb|EEV11864.1| ispA protein [Staphylococcus aureus subsp. aureus E1410] gi|257283898|gb|EEV14021.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876] gi|282313458|gb|EFB43853.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101] gi|282317108|gb|EFB47482.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427] gi|282321510|gb|EFB51835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899] gi|282324855|gb|EFB55165.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327105|gb|EFB57400.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331223|gb|EFB60737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595722|gb|EFC00686.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160] gi|283790435|gb|EFC29252.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920228|gb|EFD97294.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015] gi|291095070|gb|EFE25335.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 58-424] gi|291466784|gb|EFF09304.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809] gi|295128458|gb|EFG58092.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575820|gb|EFH94536.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8] gi|312438010|gb|ADQ77081.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH60] gi|315195423|gb|EFU25810.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus CGS00] Length = 293 Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 93/204 (45%), Positives = 125/204 (61%), Gaps = 4/204 (1%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N +L ++ Y+L GGK+IR L+ N + ++ A+E IH YSLIHDDLP+ Sbjct: 27 NTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPA 86 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS +L D ++ +++ L+ Sbjct: 87 MDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDD-RLTDEVKIKVLQRLSIAS 145 Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+GGQMLD+Q E ID + MI K KTGAL+ FA S A +A+ KE L Sbjct: 146 GHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLES 205 Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236 + +LG++FQ+ DDLLDC D K Sbjct: 206 YSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228] Length = 293 Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 83/201 (41%), Positives = 130/201 (64%), Gaps = 5/201 (2%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q + +L +++Y LL GGK+IR L A L N+ AL+ G+A+E IH YSLIHD Sbjct: 26 QDELAPQLTKSMKYTLLSGGKRIRPILTLLIAELLEGNYQAALKAGSALEMIHSYSLIHD 85 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP+MD+ +RRGK T H+ + E TAI+AG+GLLTYAF++++ +LK +++ +++ + Sbjct: 86 DLPAMDDDKLRRGKKTNHLVFGEATAILAGDGLLTYAFQVLAD--LELKPDLKVKIIANT 143 Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G QGM+GGQ+LD++ E D T ++ + + KTGAL+ + +G + EK+ Sbjct: 144 AKFSGYQGMVGGQVLDLEAENKDLTLQEMQKVHQAKTGALIKASVLNGVYCSDFKPEEKK 203 Query: 209 RLRCFGENLGIIFQLADDLLD 229 L + E +G++FQ+ DDLLD Sbjct: 204 ALLTYAEKIGVLFQIVDDLLD 224 >gi|304409467|ref|ZP_07391087.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|307303825|ref|ZP_07583578.1| Polyprenyl synthetase [Shewanella baltica BA175] gi|304351985|gb|EFM16383.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|306912723|gb|EFN43146.1| Polyprenyl synthetase [Shewanella baltica BA175] Length = 293 Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 94/228 (41%), Positives = 133/228 (58%), Gaps = 8/228 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S +QE +R+D + L Q S ++ +L +A+ Y ALLGGK+IR FLV Sbjct: 2 LVSAIQEFQQRVD----NQLKQRFSTLE-DTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 T AFEI++ + ++ L G +GM GGQ +D+ D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 MKTGAL+ A E I A+A +++ + F +G+ FQ+ DD+LD Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILD 224 >gi|58584994|ref|YP_198567.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419310|gb|AAW71325.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 305 Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 89/234 (38%), Positives = 132/234 (56%), Gaps = 39/234 (16%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RL+SA+RY LL K IR FLV + +FNV + + A+ECIH YSLIHDDLP M Sbjct: 24 NRLISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCM 83 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN RRG+ + H ++D+ TA++AG+ LLT AFEI+SS N R +++ +L+ IG Sbjct: 84 DNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNE--GSNKRCEIIKALSQAIG 141 Query: 156 LQGMLGGQMLDIQD--------EFID----------------------------ETQVFM 179 +GM+GGQ+LDI+ +++D ++++ Sbjct: 142 AKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKE 201 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I MKT L +CE GAI+ A+ ++ L +G NLG+IFQ DD+ D ++D Sbjct: 202 IHLMKTAKLFAASCEIGAIIGSATDKQRRALYNYGVNLGLIFQAKDDIRDYKQD 255 >gi|21283203|ref|NP_646291.1| hypothetical protein MW1474 [Staphylococcus aureus subsp. aureus MW2] gi|49486358|ref|YP_043579.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MSSA476] gi|253732175|ref|ZP_04866340.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|297207759|ref|ZP_06924194.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911840|ref|ZP_07129283.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70] gi|21204643|dbj|BAB95339.1| ispA [Staphylococcus aureus subsp. aureus MW2] gi|49244801|emb|CAG43248.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MSSA476] gi|253723964|gb|EES92693.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|296887776|gb|EFH26674.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886086|gb|EFK81288.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70] Length = 293 Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 13 SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 +K ID + ++L + S M TQ + +L ++ GGK+IR L+ N + Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+I Sbjct: 64 GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 SS +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 182 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 FA S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 183 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|323440419|gb|EGA98131.1| geranyltranstransferase [Staphylococcus aureus O11] gi|323443193|gb|EGB00811.1| geranyltranstransferase [Staphylococcus aureus O46] Length = 288 Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 13 SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 +K ID + ++L + S M TQ + +L ++ GGK+IR L+ N + Sbjct: 2 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 58 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+I Sbjct: 59 GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 118 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 SS +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ Sbjct: 119 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 177 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 FA S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 178 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224 >gi|253733229|ref|ZP_04867394.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH130] gi|253728769|gb|EES97498.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH130] Length = 288 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 13 SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 +K ID + ++L + S M TQ + +L ++ GGK+IR L+ N + Sbjct: 2 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 58 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+I Sbjct: 59 GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 118 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 SS +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ Sbjct: 119 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 177 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 FA S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 178 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224 >gi|15924511|ref|NP_372045.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp. aureus Mu50] gi|15927102|ref|NP_374635.1| hypothetical protein SA1352 [Staphylococcus aureus subsp. aureus N315] gi|148268006|ref|YP_001246949.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150394073|ref|YP_001316748.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156979840|ref|YP_001442099.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp. aureus Mu3] gi|253314891|ref|ZP_04838104.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006308|ref|ZP_05144909.2| geranyltranstransferase-like protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793598|ref|ZP_05642577.1| polyprenyl synthetase [Staphylococcus aureus A9781] gi|258411102|ref|ZP_05681382.1| polyprenyl synthetase [Staphylococcus aureus A9763] gi|258420094|ref|ZP_05683049.1| polyprenyl synthetase [Staphylococcus aureus A9719] gi|258437354|ref|ZP_05689338.1| polyprenyl synthetase [Staphylococcus aureus A9299] gi|258443560|ref|ZP_05691899.1| polyprenyl synthetase [Staphylococcus aureus A8115] gi|258446767|ref|ZP_05694921.1| polyprenyl synthetase [Staphylococcus aureus A6300] gi|258448681|ref|ZP_05696793.1| polyprenyl synthetase [Staphylococcus aureus A6224] gi|258453498|ref|ZP_05701476.1| polyprenyl synthetase [Staphylococcus aureus A5937] gi|269203151|ref|YP_003282420.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98] gi|282893023|ref|ZP_06301257.1| geranyltranstransferase [Staphylococcus aureus A8117] gi|282928993|ref|ZP_06336580.1| geranyltranstransferase [Staphylococcus aureus A10102] gi|295406644|ref|ZP_06816449.1| geranyltranstransferase [Staphylococcus aureus A8819] gi|296275122|ref|ZP_06857629.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MR1] gi|297245773|ref|ZP_06929638.1| geranyltranstransferase [Staphylococcus aureus A8796] gi|13701320|dbj|BAB42614.1| ispA [Staphylococcus aureus subsp. aureus N315] gi|14247292|dbj|BAB57683.1| geranyltranstransferase homolog [Staphylococcus aureus subsp. aureus Mu50] gi|147741075|gb|ABQ49373.1| farnesyl-diphosphate synthase [Staphylococcus aureus subsp. aureus JH9] gi|149946525|gb|ABR52461.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156721975|dbj|BAF78392.1| geranyltranstransferase homolog [Staphylococcus aureus subsp. aureus Mu3] gi|257787570|gb|EEV25910.1| polyprenyl synthetase [Staphylococcus aureus A9781] gi|257840252|gb|EEV64716.1| polyprenyl synthetase [Staphylococcus aureus A9763] gi|257843805|gb|EEV68199.1| polyprenyl synthetase [Staphylococcus aureus A9719] gi|257848559|gb|EEV72547.1| polyprenyl synthetase [Staphylococcus aureus A9299] gi|257850966|gb|EEV74909.1| polyprenyl synthetase [Staphylococcus aureus A8115] gi|257854342|gb|EEV77291.1| polyprenyl synthetase [Staphylococcus aureus A6300] gi|257857959|gb|EEV80848.1| polyprenyl synthetase [Staphylococcus aureus A6224] gi|257864229|gb|EEV86979.1| polyprenyl synthetase [Staphylococcus aureus A5937] gi|262075441|gb|ACY11414.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98] gi|282589400|gb|EFB94491.1| geranyltranstransferase [Staphylococcus aureus A10102] gi|282764341|gb|EFC04467.1| geranyltranstransferase [Staphylococcus aureus A8117] gi|285817204|gb|ADC37691.1| Geranyltranstransferase (farnesyldiphosphate synthase) [Staphylococcus aureus 04-02981] gi|294968391|gb|EFG44415.1| geranyltranstransferase [Staphylococcus aureus A8819] gi|297177424|gb|EFH36676.1| geranyltranstransferase [Staphylococcus aureus A8796] gi|312829911|emb|CBX34753.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129799|gb|EFT85789.1| hypothetical protein CGSSa03_01898 [Staphylococcus aureus subsp. aureus CGS03] gi|329727336|gb|EGG63792.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21172] gi|329730812|gb|EGG67190.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21193] Length = 293 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 13 SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 +K ID + ++L + S M TQ + +L ++ GGK+IR L+ N + Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+I Sbjct: 64 GVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 SS +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 182 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 FA S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 183 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|157962808|ref|YP_001502842.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345] gi|157847808|gb|ABV88307.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345] Length = 293 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 84/197 (42%), Positives = 122/197 (61%), Gaps = 3/197 (1%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + +L +A+++ AL+GGK+IR FLV + V T AAIEC+H YSLIHDDLP+ Sbjct: 28 DPQLKAAMKHGALIGGKRIRPFLVYAIGDMLGVKLSTLDSCAAAIECVHAYSLIHDDLPA 87 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRG+PTVHI +DE TAI+AG+ L AFEIIS P + + ++ +L + Sbjct: 88 MDDDALRRGQPTVHIAFDEATAILAGDALQALAFEIISEPIENITPSQNLAMVRALANAS 147 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM GGQ +D+ D+ I+ + + K+KTGAL+ A E I A E++ L Sbjct: 148 GYSGMCGGQAMDLSATDKQIELATLIQLHKLKTGALIRCAVEFAIIAAKIEGQERQALLD 207 Query: 213 FGENLGIIFQLADDLLD 229 F + +G+ FQ+ DD+LD Sbjct: 208 FADAIGLAFQVQDDVLD 224 >gi|68171692|ref|ZP_00545051.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa] gi|88657808|ref|YP_507273.1| putative geranyltranstransferase [Ehrlichia chaffeensis str. Arkansas] gi|67998884|gb|EAM85577.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa] gi|88599265|gb|ABD44734.1| putative geranyltranstransferase [Ehrlichia chaffeensis str. Arkansas] Length = 267 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 90/215 (41%), Positives = 125/215 (58%), Gaps = 3/215 (1%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+ Q S + + D LL+++RY++ GK IR FLV A +FNVN L V AA+E Sbjct: 8 LVKQLESILPENNQDILLTSMRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAVEI 67 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSLIHDDLP +DN IRRG+ + H +++E AI+ G+ LLT AFEI+S+ Sbjct: 68 IHVYSLIHDDLPGIDNENIRRGQASSHKKFNEAIAILTGDALLTLAFEILSTIDE--SPF 125 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 IR ++ +L +G QGM+ GQ+LD + D + I +KT ACE G I+ + Sbjct: 126 IRCCMIKALAKALGYQGMIQGQILDTETIAKDTNDIQAIHVLKTAQFFSVACELGGILGN 185 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 AS E L +G NLG FQ+ DD+ D +D K Sbjct: 186 ASNIELNALANYGLNLGHAFQVKDDIADANQDKSK 220 >gi|163749512|ref|ZP_02156760.1| geranyltranstransferase [Shewanella benthica KT99] gi|161330921|gb|EDQ01848.1| geranyltranstransferase [Shewanella benthica KT99] Length = 293 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 131/219 (59%), Gaps = 8/219 (3%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA 72 +R+D+ L+ + QT + +LL+A+++ ALLGGK+IR FLV + ++ Sbjct: 11 QRVDSQLEKIF-----DNQTVTDPKLLAAMKHGALLGGKRIRPFLVYAIGDMLSIPLKQL 65 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AAIEC+H YSLIHDDLP+MD+ +RRG+PTVH+ +DE AI+AG+ L AFE++ Sbjct: 66 DSSAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEAAAILAGDALQALAFEVMC 125 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190 P ++ ++ +L G GM GGQ +D+ ++ ID + + K+KTGAL+ Sbjct: 126 EPIDEIAPRQNLAMVRALAKASGYSGMCGGQAMDLSATNKPIDLATLSQLHKLKTGALIR 185 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A E I A SQ E+ L F + +G+ FQ+ DD+LD Sbjct: 186 CAVELPMIAAQVSQEEQTLLMEFADAIGLAFQVQDDVLD 224 >gi|71062428|gb|AAZ21431.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062] Length = 259 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 80/190 (42%), Positives = 119/190 (62%), Gaps = 3/190 (1%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 + Y L GGKKIRS ++ + ++F +N+ T + +GAA+ECIH YSLIHDDLP MD+ IR Sbjct: 1 MEYGLFPGGKKIRSKILIDIGAIFKINYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIR 60 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RGK + HI++ E TA++AGN LLT AFEI+ S ++ + I+ L+ L+ G G+ G Sbjct: 61 RGKISTHIKFGESTAVLAGNSLLTMAFEILVSSSLKINEKIKVDLVKKLSETSGHLGIAG 120 Query: 162 GQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 GQ LD+ E ++ + ++ KTG L F C I+ S + + G N+G+ Sbjct: 121 GQYLDLSFEKKKVSKSKIIDMEIKKTGKLFSFCCAVPVIIKRKSNTQIKFFENIGSNIGL 180 Query: 220 IFQLADDLLD 229 +FQ+ADDL+D Sbjct: 181 LFQIADDLID 190 >gi|298694804|gb|ADI98026.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED133] Length = 293 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 13 SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 +K ID + ++L + S M TQ + +L ++ GGK+IR L+ N + Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+I Sbjct: 64 GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 SS +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLEILEMIHKTKTGALL 182 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 FA S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 183 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 297 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/234 (38%), Positives = 131/234 (55%), Gaps = 11/234 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 ++ N +D L + L + + H A+ Y++ GGK++R L LF Sbjct: 7 MKNNKNLVDQKLQEYLPNKSEYPTAIH-----EAMHYSVFAGGKRLRPLLTLAAGDLFGA 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N T L AIE IH YSLIHDDLP++DN +RRGK T H+ + E AI+AG+ LL YA Sbjct: 62 NKKTILPFACAIELIHTYSLIHDDLPALDNDDLRRGKSTNHVVFGEDIAILAGDALLNYA 121 Query: 128 FEIISSPKTQLKDNIRSQLML--SLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQK 182 FE+++S + + R+ L + G +GM+GGQ++DI+ E ID V I K Sbjct: 122 FELMTSKGVENFTDARTPLWAISEVAKASGTKGMIGGQVVDIKSEKNADIDLETVSYIHK 181 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTGAL + GAI++ ASQ + E+L + + LG+ FQ+ DD+LD E D K Sbjct: 182 HKTGALFTASIRIGAILSQASQADLEKLTTYAQKLGLAFQVVDDILDIEGDEQK 235 >gi|24373100|ref|NP_717143.1| geranyltranstransferase [Shewanella oneidensis MR-1] gi|24347286|gb|AAN54587.1|AE015598_6 geranyltranstransferase [Shewanella oneidensis MR-1] Length = 293 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 123/212 (58%), Gaps = 2/212 (0%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +DD L Q S ++ + ALLGGK+IR FLV +F V AAI Sbjct: 13 VDDQLKQRFSTLEDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGVPLEKLDACAAAI 72 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 ECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFEI++ + Sbjct: 73 ECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGIT 132 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ +L G +GM GGQ +D+ D+ ID + + MKTGAL+ A E Sbjct: 133 SEQHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKTGALISCAVELAL 192 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I A+A +++ + + F +G+ FQ+ DD+LD Sbjct: 193 IAANAPKDQYQTMMEFAHAVGLAFQVQDDILD 224 >gi|302333198|gb|ADL23391.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus JKD6159] Length = 288 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 124/202 (61%), Gaps = 4/202 (1%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L ++ Y+L GGK+IR L+ N + ++ A+E IH YSLIHDDLP+MD Sbjct: 24 QLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMD 83 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGK T H Y E TAI+AG+ LLT AFE+ISS +L D ++ +++ L+ G Sbjct: 84 NDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDD-RLTDEVKIKVLQRLSIASGH 142 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQMLD+Q E ID + MI K KTGAL+ FA S A +A+ KE L + Sbjct: 143 VGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYS 202 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLDC D K Sbjct: 203 YHLGMMFQIKDDLLDCYGDEAK 224 >gi|114563954|ref|YP_751468.1| polyprenyl synthetase [Shewanella frigidimarina NCIMB 400] gi|114335247|gb|ABI72629.1| farnesyl-diphosphate synthase [Shewanella frigidimarina NCIMB 400] Length = 293 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/186 (45%), Positives = 111/186 (59%), Gaps = 2/186 (1%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 ALLGGK+IR FLV + VN + AAIECIH YSLIHDDLP+MDN +RRG+P Sbjct: 39 ALLGGKRIRPFLVYSVGDMLGVNINALDKAAAAIECIHAYSLIHDDLPAMDNDALRRGQP 98 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVHI +DE TAI+AG+ L T AFEII++P L + ++ L G QGM GGQ + Sbjct: 99 TVHIAFDEATAILAGDALQTLAFEIITAPCNDLHPKQQLAMVRVLAKASGYQGMCGGQAI 158 Query: 166 DIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D+ D I+ ++ + KTGAL+ A E I A + + + LG+ FQ+ Sbjct: 159 DLSATDHSINLDRLTELHNKKTGALISCAVELALIAADVPDEHYKLMMKYAHTLGLAFQV 218 Query: 224 ADDLLD 229 DD+LD Sbjct: 219 QDDILD 224 >gi|167624992|ref|YP_001675286.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] gi|167355014|gb|ABZ77627.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] Length = 293 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 84/197 (42%), Positives = 122/197 (61%), Gaps = 3/197 (1%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + +L +A+++ AL+GGK+IR FLV + V T AAIECIH YSLIHDDLP+ Sbjct: 28 DPQLKAAMKHGALIGGKRIRPFLVYAIGDMLGVKLTTLDSCAAAIECIHAYSLIHDDLPA 87 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRG+PTVHI +DE TAI+AG+ L AFEIIS P + + ++ +L + Sbjct: 88 MDDDALRRGQPTVHIAFDEATAILAGDALQALAFEIISDPIENITPSQNLAMVKALANAS 147 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM GGQ +D+ ++ I+ + + K+KTGAL+ A E I A E++ L Sbjct: 148 GYSGMCGGQAMDLSATNKQIELATLIKLHKLKTGALIRCAVEFAIIAAKVDGQERQALLD 207 Query: 213 FGENLGIIFQLADDLLD 229 F + +G+ FQ+ DD+LD Sbjct: 208 FADAIGLAFQVQDDVLD 224 >gi|254293553|ref|YP_003059576.1| polyprenyl synthetase [Hirschia baltica ATCC 49814] gi|254042084|gb|ACT58879.1| Polyprenyl synthetase [Hirschia baltica ATCC 49814] Length = 303 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 92/229 (40%), Positives = 145/229 (63%), Gaps = 9/229 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67 L E + ++ +LD + +A + Q L+ A+R+ AL GGK++R F+ E LF+ Sbjct: 15 LAECADKVTVVLDKFI-PSAIGPEAQ----LMRAMRHGALAGGKRLRPFITIEVGRLFDA 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + LR +A+EC+H YSL+HDDLP MD+ +RRG PTVH +DE TA++AG+ L A Sbjct: 70 PEKSLLRAASALECVHAYSLVHDDLPCMDDDDLRRGLPTVHKAFDEATAVLAGDALQALA 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI---QKMK 184 FEI+++ +T +R +L+ L + G +GM+GGQM+D+ F D+ + ++ Q+MK Sbjct: 130 FEILANTETHGDAGVRCKLIEVLALSSGARGMVGGQMIDMAPSFDDKDALNILARMQRMK 189 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TGAL+ A E GAI+ A+++E + L F +LG+ +Q+ DDLLD + D Sbjct: 190 TGALISCAAEFGAIIGGANEHEHQALAGFTTDLGLAYQIKDDLLDVQGD 238 >gi|82751126|ref|YP_416867.1| geranyltranstransferase [Staphylococcus aureus RF122] gi|258423175|ref|ZP_05686068.1| geranyltranstransferase [Staphylococcus aureus A9635] gi|82656657|emb|CAI81083.1| geranyltranstransferase [Staphylococcus aureus RF122] gi|257846625|gb|EEV70646.1| geranyltranstransferase [Staphylococcus aureus A9635] Length = 293 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 97/227 (42%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 13 SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 +K ID + ++L + S M TQ + +L ++ GGK+IR L+ N + Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+I Sbjct: 64 GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 SS +L D ++ +++ L+ G GM+GGQMLD+Q E I+ + MI K KTGAL+ Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPINLETLEMIHKTKTGALL 182 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 FA S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 183 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|319776299|ref|YP_004138787.1| geranyltranstransferase [Haemophilus influenzae F3047] gi|317450890|emb|CBY87115.1| geranyltranstransferase [Haemophilus influenzae F3047] Length = 296 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 139/240 (57%), Gaps = 19/240 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ L SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLETQLEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYTT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAGKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTH----NIGLQGMLGGQMLDIQDEF--IDET 175 L ++AFEI++ NI ++ L+L + G+QGM GQ LD+ E I + Sbjct: 117 ALQSFAFEILTKTP-----NISAEQKLALVQILAKSSGIQGMCLGQSLDLISEHKQISLS 171 Query: 176 QVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ +I + KTGAL+ A + G I + A + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 172 ELELIHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAETIGLAFQVQDDILDIEGD 231 >gi|254460310|ref|ZP_05073726.1| geranyltranstransferase [Rhodobacterales bacterium HTCC2083] gi|206676899|gb|EDZ41386.1| geranyltranstransferase [Rhodobacteraceae bacterium HTCC2083] Length = 284 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 89/213 (41%), Positives = 130/213 (61%), Gaps = 16/213 (7%) Query: 34 QHNDRLLS---------AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 QH R+LS A+RYA GGK++R+FLV E A + V+ ++ AIE +H Sbjct: 10 QHFTRVLSSFADVPIVQAMRYATTGGKRLRAFLVRESARVCGVDVARSIAPACAIEALHA 69 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSL+HDDLP MD+ +RRG+PTVH+++D+ TA++ G+ L T AFE++S P +RS Sbjct: 70 YSLVHDDLPCMDDDDLRRGQPTVHVKWDDATAVLCGDALQTLAFELVSEPSCHEDPLVRS 129 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMA 200 L L+L G GM+ GQ LDI+ E Q+ +Q KTGAL+ ++ +GA++A Sbjct: 130 TLALTLARASGAAGMVYGQALDIEAESAANPLTIEQITELQNGKTGALITWSATAGAVLA 189 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A N L+ +G+ LG+ FQ+ADD+LD D Sbjct: 190 KADTNA---LKTYGDALGLAFQIADDILDVTSD 219 >gi|71898704|ref|ZP_00680873.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1] gi|71731469|gb|EAO33531.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1] Length = 291 Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 89/221 (40%), Positives = 126/221 (57%), Gaps = 10/221 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 +R D+ L+ L + TQ RL +A+RY +L GGK+IR LV LF+V+ Sbjct: 11 QRTDSYLERTL-----SIPTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLL 65 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ G+ L T AFE ++ Sbjct: 66 DVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLA 125 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190 ++R + +LTH G+ GM GGQ LDI +T + ++ +K+G LM Sbjct: 126 DAPAD--TSLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEVMHALKSGTLMR 183 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A GA+ S + L F LG+ FQ+ DD+LD E Sbjct: 184 AAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIE 224 >gi|94676522|ref|YP_588724.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219672|gb|ABF13831.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 304 Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 96/235 (40%), Positives = 137/235 (58%), Gaps = 13/235 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L SKLQ++S I+ +L+ L +S N L++A+R AL GGK++R FL+ + L Sbjct: 11 LISKLQKSSNYIEIVLEQHLCTLSSK-----NKILVTAMRSALTGGKRLRPFLIYQTGKL 65 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F + + AAIECIH YSLIHDDLP+MDN +RRGKPT HIQ+ E AI+AG+ L Sbjct: 66 FGIKKHSLNAAAAAIECIHAYSLIHDDLPAMDNHKLRRGKPTCHIQFGEKIAILAGDALH 125 Query: 125 TYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 T AF I+++ P +K +R +++ L + G GM GQ L+++ +F + V Sbjct: 126 TLAFTILANAQMPAIPIK--VRLKMIEILANASGANGMCLGQALELESQFKKMSAKAVET 183 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I KTGAL+ A GAI A + S+ L + +G+ FQ+ DDL D ED Sbjct: 184 IYSYKTGALIRAAVHIGAIAAGNKSKLAINYLDRYATAIGLAFQVQDDLWDISED 238 >gi|254475094|ref|ZP_05088480.1| polyprenyl synthetase [Ruegeria sp. R11] gi|214029337|gb|EEB70172.1| polyprenyl synthetase [Ruegeria sp. R11] Length = 294 Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 134/214 (62%), Gaps = 12/214 (5%) Query: 29 SHMQTQ--HNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86 +HM+ + ND L +A+RYA+ GGK +R FLV E A L V+ AL AIECIH YS Sbjct: 25 AHMEARLGGNDPLHAAMRYAITGGKMLRGFLVLESARLHGVDDDAALEAALAIECIHAYS 84 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+HDDLP MD+ +RRG+PTVH ++DE A++AG+ L T+AFE+++ PK + L Sbjct: 85 LVHDDLPCMDDDDLRRGQPTVHKKWDEAMAVLAGDSLQTFAFELLADPKIGPHALV---L 141 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHA 202 + L + G GM+ GQMLDI E +D Q+ +Q KTG L+ ++ +GA+MA A Sbjct: 142 IRGLAQSSGKDGMVSGQMLDIAAETATTPLDLDQITRLQNRKTGCLISWSATAGAVMAGA 201 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + LR + + LG+ FQ+ADD+LD E D K Sbjct: 202 DEAP---LRRYADALGLAFQIADDILDVEGDAAK 232 >gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG'] Length = 303 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 84/200 (42%), Positives = 127/200 (63%), Gaps = 5/200 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L ++RY+LL GGK+IR L + + + + + A +E IH YSLIHDDLPSMD+ Sbjct: 39 LAESMRYSLLAGGKRIRPVLAMAAMEALDRDPIPCIPLLAPLELIHTYSLIHDDLPSMDD 98 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIG 155 +RRGKPT H+ Y + TAI+AG+ LLT+AF ++S P + IR +++ L+ G Sbjct: 99 DSLRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDPDYDKLVSFEIRLKIIHELSVGAG 158 Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GM+GGQ +DI E ++ + + + + KTGAL+ + GA++ AS ++ ERL + Sbjct: 159 INGMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIRASLRIGALLGKASSSDFERLDRY 218 Query: 214 GENLGIIFQLADDLLDCEED 233 G+ +GI FQ+ADDLLD E D Sbjct: 219 GQAVGIAFQIADDLLDVEGD 238 >gi|28199392|ref|NP_779706.1| farnesyl-diphosphate synthase [Xylella fastidiosa Temecula1] gi|182682121|ref|YP_001830281.1| polyprenyl synthetase [Xylella fastidiosa M23] gi|28057498|gb|AAO29355.1| geranyltranstransferase [Xylella fastidiosa Temecula1] gi|182632231|gb|ACB93007.1| Polyprenyl synthetase [Xylella fastidiosa M23] gi|307578386|gb|ADN62355.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 291 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 89/221 (40%), Positives = 125/221 (56%), Gaps = 10/221 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 +R D+ L+ L + TQ RL +A+RY +L GGK+IR LV LF+V+ Sbjct: 11 QRTDSYLERTL-----SIPTQAPQRLQAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLL 65 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ G+ L T AFE ++ Sbjct: 66 DVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLA 125 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190 ++R + +LTH G+ GM GGQ LDI +T + + +K+G LM Sbjct: 126 DAPA--DTSLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALKSGTLMR 183 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A GA+ S + L F LG+ FQ+ DD+LD E Sbjct: 184 AAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIE 224 >gi|170730756|ref|YP_001776189.1| geranyltranstransferase [Xylella fastidiosa M12] gi|167965549|gb|ACA12559.1| geranyltranstransferase [Xylella fastidiosa M12] Length = 291 Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 89/221 (40%), Positives = 125/221 (56%), Gaps = 10/221 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 +R D+ L+ L + TQ RL +A+RY +L GGK+IR LV LF+V+ Sbjct: 11 QRTDSYLERTL-----SIPTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLL 65 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ G+ L T AFE ++ Sbjct: 66 DVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLA 125 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190 ++R + +LTH G+ GM GGQ LDI +T + + +K+G LM Sbjct: 126 DAPADA--SLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALKSGTLMR 183 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A GA+ S + L F LG+ FQ+ DD+LD E Sbjct: 184 AAVRMGALAGDPSPEDLHSLDTFAATLGLAFQVRDDILDIE 224 >gi|329851866|ref|ZP_08266547.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] gi|328839715|gb|EGF89288.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] Length = 303 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 97/235 (41%), Positives = 138/235 (58%), Gaps = 7/235 (2%) Query: 2 NGGLPSKLQENSKRID--TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58 N LP LQ ++ D T++ D LL + RL A+RYA LG GK++R F Sbjct: 7 NTDLPPLLQRMAETADLVTVVLDQLLPRGDGPEC----RLTEAMRYAALGPGKRLRPFFA 62 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 E A LF+ + LR A+ECIH YSL+HDDLP MD+ IRRG+ TVH YDE TA++ Sbjct: 63 LETARLFDADENAVLRAACALECIHAYSLVHDDLPCMDDDDIRRGRLTVHRAYDEATAVL 122 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 G+ L + AFEI++S T +R +L+ L G QGM GGQM+D+ D V Sbjct: 123 VGDALQSVAFEILASEDTHDDPLVRCELVRMLAQASGAQGMAGGQMIDLIGVHDDLGGVA 182 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +Q++KTGAL+ +A + ++A + E + F ++LG+ +Q+ADD+LD E D Sbjct: 183 RMQRLKTGALIVYAFQIPLVVADVGEREGMVMTHFAQDLGLAYQIADDVLDIEGD 237 >gi|77361281|ref|YP_340856.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas haloplanktis TAC125] gi|76876192|emb|CAI87414.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas haloplanktis TAC125] Length = 295 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 122/202 (60%), Gaps = 4/202 (1%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 ++ + +A Y+L+ GGK++R FLV + + + AAIECIH YSL+HDDLP+ Sbjct: 29 DETIKAATHYSLMNGGKRLRPFLVYATGKMLGADKQDLDVLAAAIECIHSYSLVHDDLPA 88 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRG+PT HI Y E AI+AG+ L AFE+I+ + +++ L H Sbjct: 89 MDDDELRRGRPTCHIVYGEAHAILAGDALQALAFELIAKHNFNCSAQAQVKMIAELAHAS 148 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLR 211 GLQGM+ GQ LDI D+ I ++ I K+KTGAL+ A GA+ + + SQN E L Sbjct: 149 GLQGMVAGQGLDIAATDKVITVAELERIHKLKTGALISCAITLGALCSNNVSQNTLENLA 208 Query: 212 CFGENLGIIFQLADDLLDCEED 233 FG +G+ FQ+ DD+LD E D Sbjct: 209 TFGYAIGLAFQVHDDILDVEGD 230 >gi|148552951|ref|YP_001260533.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1] gi|148498141|gb|ABQ66395.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1] Length = 297 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 103/237 (43%), Positives = 143/237 (60%), Gaps = 9/237 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 M+ L S+L ++ ID D LL +RL +A+R+A +GG K++R L Sbjct: 1 MSALLASELARIAQEIDARFDTLLTPP-----DDSRERLYAAMRHAAIGGGKRLRPLLAC 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A LF V+ ALR G AIE IH YSLIHDDLP+MD+ +RRG+PTVH YDE TAI+A Sbjct: 56 ASARLFAVDPECALRAGLAIEAIHVYSLIHDDLPAMDDDDLRRGRPTVHRAYDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQ 176 G+G AFEI +S T +RS+L+ +L G GM+GGQ +D+ E E Sbjct: 116 GDGFQALAFEIAASEATHPDPFVRSELVAALAAAAGPAGMVGGQAMDMAAEAGGEHDLDA 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + +Q++KTGAL+ F+ E+GAI+ + +LR + +LG+ FQ+ADDLLD E D Sbjct: 176 ISRLQQLKTGALIGFSIEAGAILGRVPPEGRTKLRAYAHDLGLAFQIADDLLDAEGD 232 >gi|114765815|ref|ZP_01444908.1| geranylgeranyl pyrophosphate synthetase [Pelagibaca bermudensis HTCC2601] gi|114541814|gb|EAU44851.1| geranylgeranyl pyrophosphate synthetase [Roseovarius sp. HTCC2601] Length = 289 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 89/199 (44%), Positives = 124/199 (62%), Gaps = 7/199 (3%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 +L A+RYA GGK +R +LV E A L +V AL AIE IH YSL+HDDLP MD+ Sbjct: 29 VLHAMRYATTGGKGLRGWLVLEGARLHDVAPERALWPACAIEAIHAYSLVHDDLPCMDDD 88 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG PTVH ++DE TA++AG+ L FE+++ P+ +R+ L LSL G +G Sbjct: 89 DLRRGLPTVHRKWDEATAVLAGDALQALGFEMVADPRCHPDPLVRADLTLSLARAAGARG 148 Query: 159 MLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M+ GQ LD+ D +D Q+ +Q KTGAL+ ++ E+GA +AHA + L + Sbjct: 149 MVLGQALDMAAERADAPLDLQQITALQAGKTGALIAWSAEAGARLAHA---DLAPLTAYA 205 Query: 215 ENLGIIFQLADDLLDCEED 233 E LG+ FQ+ADD+LD E D Sbjct: 206 ERLGLAFQIADDILDVEGD 224 >gi|171464023|ref|YP_001798136.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193561|gb|ACB44522.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 300 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/231 (40%), Positives = 134/231 (58%), Gaps = 18/231 (7%) Query: 12 NSKRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68 +S R + LD LL QT H RL AIRYA GG K+IR LV L N + Sbjct: 14 HSIRTEQTLDRLLDSAQTIPH-------RLHEAIRYAAQGGGKRIRPLLVYAAGQLGNKS 66 Query: 69 HLTALR----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + AIECIH YSL+HDDLP MD+ Y+RRG+PTVH +DE TA++ G+ L Sbjct: 67 DVVPVEFLDAAAVAIECIHAYSLVHDDLPCMDDDYLRRGRPTVHKAFDEATALLVGDALQ 126 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182 T AFEI+++ T +R +++ +L G +GM GGQ +D++ + +D + + Sbjct: 127 TRAFEILAN--TNGDAQVRLRMISTLAAASGSRGMAGGQAIDLESVGKKLDLQGLKQMHA 184 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ A E G I AH + + +L+ + ++LG+ FQ+ DD+LD D Sbjct: 185 MKTGALLSCAVELGGIAAHLNFAQMMQLQSYSKSLGLAFQIVDDVLDATAD 235 >gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum] Length = 303 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 9/223 (4%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 ++ LD L ++ Q L ++RY+LL GGK+IR L + + + Sbjct: 20 VEQFLDSLFVKE----QRTDYGTLAESMRYSLLAGGKRIRPVLAMAAIEALGKDPIPYIP 75 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A +E IH YSLIHDDLPSMDN +RRGKPT H+ Y + TAI+AG+ LLT+AF ++S P Sbjct: 76 LLAPLELIHTYSLIHDDLPSMDNDSLRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDP 135 Query: 135 KTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMC 190 + IR +++ L+ G+ GM+GGQ +DI E ++ + + + + KTGAL+ Sbjct: 136 DYDKLVSFEIRLKIIQELSVGAGVNGMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIR 195 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA++ AS + E L +G+ +GI FQ+ADDLLD E D Sbjct: 196 ASLRIGALLGKASSPDFEHLDRYGQAVGIAFQIADDLLDVEGD 238 >gi|71274508|ref|ZP_00650796.1| Polyprenyl synthetase [Xylella fastidiosa Dixon] gi|71900337|ref|ZP_00682472.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1] gi|71164240|gb|EAO13954.1| Polyprenyl synthetase [Xylella fastidiosa Dixon] gi|71729912|gb|EAO32008.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1] Length = 291 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 117/202 (57%), Gaps = 5/202 (2%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 TQ RL +A+RY +L GGK+IR LV LF+V+ AA+E IH YSL+HDD Sbjct: 25 TQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLLDVPAAAVELIHAYSLVHDD 84 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ +RRG+PTVHI +DE TAI+ G+ L T AFE ++ ++R + +LT Sbjct: 85 LPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLADAPADA--SLRIAWLQTLT 142 Query: 152 HNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 H G+ GM GGQ LDI +T + + +K+G LM A GA+ S + Sbjct: 143 HAAGVAGMCGGQALDIDATGQSQTLKALEAMHALKSGTLMRAAVRMGALAGDPSPEDLHS 202 Query: 210 LRCFGENLGIIFQLADDLLDCE 231 L F LG+ FQ+ DD+LD E Sbjct: 203 LDTFAATLGLAFQVRDDILDIE 224 >gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2] gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2] Length = 327 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 82/198 (41%), Positives = 116/198 (58%), Gaps = 3/198 (1%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RYA+L GGK++R LV + N + TALR AIE IH YSL+HDD+P MDN Sbjct: 64 LCDAMRYAVLDGGKRLRPLLVMAACAAVNGDAATALRPACAIELIHAYSLVHDDMPCMDN 123 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPTVH+QY E A++AG+ L AFE+++ + +++L L G Q Sbjct: 124 DVLRRGKPTVHVQYGEAQALLAGDALQALAFELLTPGDDSVDAPTQARLCRLLAQAAGYQ 183 Query: 158 GMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM GGQ +D+ + T Q+ + ++KTGAL+ + GA AS LR +G Sbjct: 184 GMAGGQAIDLASVGLPLTSAQLHEMHRLKTGALLQASVMMGAACGAASPTALAALRDYGA 243 Query: 216 NLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 244 AIGLAFQVVDDILDVTAD 261 >gi|148826941|ref|YP_001291694.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittGG] gi|148718183|gb|ABQ99310.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittGG] Length = 296 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 139/240 (57%), Gaps = 19/240 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL+A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLNAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF--IDET 175 L ++AFEI++ NI ++ L+L + G+QGM GQ LD+ E I + Sbjct: 117 ALQSFAFEILTKTP-----NISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLS 171 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233 ++ +I + KTGAL+ A + G I + ++K + L + E +G+ FQ+ DD+LD E D Sbjct: 172 ELELIHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis Ellin345] gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis Ellin345] Length = 315 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 84/219 (38%), Positives = 135/219 (61%), Gaps = 7/219 (3%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL-RVG 76 IL D L+ TQ + A+R+++ GGK++R LV E A + + + +G Sbjct: 33 ILADAALERLLPPGTQRPPSIHQAMRHSVFAGGKRLRPILVMEAARMITGSLPDGVDELG 92 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H YSLIHDDLP++DN +RRG+PT H+ + E TAI+AG+ L TYA+E+++ +T Sbjct: 93 AALEMLHTYSLIHDDLPALDNDDLRRGRPTCHVAFGEATAILAGDALQTYAYEVMARLRT 152 Query: 137 QLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFAC 193 + R Q++ + H G + GM+GGQ+LD++ E D V I + KTGAL+ + Sbjct: 153 TAE--ARVQIIEEVAHATGTIDGMIGGQVLDLEAEHTHADAATVEYIHRSKTGALITASV 210 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +G + A A + + +R+R FG++ G+ FQ+ DD+LD + Sbjct: 211 VAGGLYAGADKAQVQRIREFGKSAGLAFQIVDDVLDVTQ 249 >gi|290790316|pdb|3LVS|A Chain A, Crystal Structure Of Farnesyl Diphosphate Synthase From Rhodobacter Capsulatus Sb1003 gi|290790317|pdb|3LVS|B Chain B, Crystal Structure Of Farnesyl Diphosphate Synthase From Rhodobacter Capsulatus Sb1003 Length = 298 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 88/225 (39%), Positives = 132/225 (58%), Gaps = 12/225 (5%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72 S+R+ I D + A+ + L A+ YA GGK++R+FL E A++ ++ A Sbjct: 5 SERLKEIQDAVETAMAAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAIHGISMAQA 64 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + A+E +H YSL+HDD+P MDN +RRG PTVH ++D+ TA++AG+ L T AFE+ + Sbjct: 65 MPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQTLAFELCT 124 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDETQVFMIQKMKTG 186 P +N R L+ +L G +GM+ GQ LDI E +DE + +Q KTG Sbjct: 125 DPVLGSAEN-RVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDE--IIRLQAGKTG 181 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 AL+ FA ++GAI+A A + L + LG+ FQ+ADD+LD E Sbjct: 182 ALISFAAQAGAILAGADRGP---LTAYATALGLAFQIADDILDVE 223 >gi|294678977|ref|YP_003579592.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003] gi|293372070|gb|ADE44162.1| farnesyl diphosphate synthase [Rhodobacter capsulatus] gi|294477797|gb|ADE87185.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003] Length = 288 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 88/225 (39%), Positives = 132/225 (58%), Gaps = 12/225 (5%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72 S+R+ I D + A+ + L A+ YA GGK++R+FL E A++ ++ A Sbjct: 3 SERLKEIQDAVETAMAAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAIHGISMAQA 62 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + A+E +H YSL+HDD+P MDN +RRG PTVH ++D+ TA++AG+ L T AFE+ + Sbjct: 63 MPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQTLAFELCT 122 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDETQVFMIQKMKTG 186 P +N R L+ +L G +GM+ GQ LDI E +DE + +Q KTG Sbjct: 123 DPVLGSAEN-RVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDE--IIRLQAGKTG 179 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 AL+ FA ++GAI+A A + L + LG+ FQ+ADD+LD E Sbjct: 180 ALISFAAQAGAILAGADRGP---LTAYATALGLAFQIADDILDVE 221 >gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] Length = 294 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 86/232 (37%), Positives = 129/232 (55%), Gaps = 8/232 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 +L+ + +D L++ L + T H A+RY++ GGK++R L A Sbjct: 6 QLKSYALAVDKALNEYLPAAEVYPSTIHE-----AMRYSVFAGGKRLRPILTIAAAEAVG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + V A+E IH YSL+HDDLP+MDN RRG+PT H Y E AI+ G+ LLT Sbjct: 61 GSMEQVMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALLTQ 120 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 AFE+I+ ++ + +Q+ L + G G++GGQ++D +D+ ID + I + K Sbjct: 121 AFEVIAGTAVKVSPDKVNQVTLEIARAAGSLGLIGGQVVDTLSEDQVIDGQVLEYIHRHK 180 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 TGAL A +GAI++ AS E L + E +G+ FQ+ DDLLD E D K Sbjct: 181 TGALFRVAVRAGAILSGASAEELAALTTYAEQMGLAFQIKDDLLDIEGDEAK 232 >gi|229844084|ref|ZP_04464225.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 6P18H1] gi|229813078|gb|EEP48766.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 6P18H1] Length = 296 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 138/240 (57%), Gaps = 19/240 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF--IDET 175 L ++AFEI++ NI ++ L+L + G+QGM GQ LD+ E I + Sbjct: 117 ALQSFAFEILTKTP-----NISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLS 171 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233 ++ +I + KTGAL+ A + G I + ++K + L + E +G+ FQ+ DD+LD E D Sbjct: 172 ELELIHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|254787182|ref|YP_003074611.1| geranyltranstransferase [Teredinibacter turnerae T7901] gi|237687258|gb|ACR14522.1| geranyltranstransferase [Teredinibacter turnerae T7901] Length = 295 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 92/241 (38%), Positives = 137/241 (56%), Gaps = 19/241 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN L + + S +++ L+ +H R+ A+RY+L+ GGK+IR LV Sbjct: 1 MNPALQEFINDTSLQVNRCLEGW-----THPADAVAPRVTEAMRYSLMNGGKRIRPTLVY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A +V + L A+ECIH YSLIHDDLP+MDN +RRGKPT HI +DE TAI+A Sbjct: 56 AAARAVSVPNEATLAGAGAVECIHAYSLIHDDLPAMDNDDLRRGKPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-- 174 G+GL T AFE +S+ P T + ++ +L G +GM+ GQM+D++ E + + Sbjct: 116 GDGLQTLAFEKLSTIEDPATAVA------MIRTLALASGDKGMVAGQMIDMESEGLQQAF 169 Query: 175 --TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + I + KTGAL+ A GA ASQ + + L + + +G+ FQ+ DD+LD Sbjct: 170 TISHLEKIHRHKTGALIRAAVLMGARSVQASQEQTQSLIRYADAIGLAFQVQDDILDVIS 229 Query: 233 D 233 D Sbjct: 230 D 230 >gi|312143726|ref|YP_003995172.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus'] gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus'] Length = 294 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/202 (44%), Positives = 126/202 (62%), Gaps = 5/202 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L A+RY LL GGK+IR L L ++ AL+ G+A+E IH YSLIHDDLP+MD Sbjct: 33 ELSEAMRYTLLSGGKRIRPILTLLTTELLKGDYQAALKSGSALEMIHSYSLIHDDLPAMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGK T H+ + E AI+AG+ LLTYAFEI+S + +L+ + +++ + N G+ Sbjct: 93 DDQLRRGKKTNHLVFGEAKAILAGDALLTYAFEILS--ELELEPAKKIKIIKLIASNSGM 150 Query: 157 QGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ LDI E + + M I KTGAL+ + SG + S+ EKE L+ + Sbjct: 151 LGMVGGQTLDIDAEKKELSLAEMQKIHAAKTGALIKASVLSGVYCSVYSRTEKEALQKYA 210 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 ENLG++FQ+ DDLLD D K Sbjct: 211 ENLGVLFQVVDDLLDVTGDTEK 232 >gi|70726395|ref|YP_253309.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435] gi|68447119|dbj|BAE04703.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435] Length = 293 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L +++Y+L GGK+IR LV + N ++ + A+E IH YSLIHDDLP+ Sbjct: 27 NTNLEESMQYSLNAGGKRIRPLLVFLTLDVLNQDYKKGKKTALALEMIHTYSLIHDDLPA 86 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGK T H Y E AI+AG+ LLT AFEII+ + L+ +++ +++ L HN Sbjct: 87 MDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFEIIADDEL-LESDVKVKILSRLAHNS 145 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+GGQ LD+Q D+ +D + I K KTGAL+ FA S A +A ++ + L Sbjct: 146 GHLGMVGGQTLDMQSEDKPVDLDTLEQIHKAKTGALLQFAVLSAADIAKVDKSTSQALED 205 Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236 F ++G++FQ+ DDLLD D K Sbjct: 206 FSNHMGLMFQIKDDLLDVYGDESK 229 >gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803] gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803] Length = 302 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 88/216 (40%), Positives = 126/216 (58%), Gaps = 9/216 (4%) Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 S + +++ A+RY+LL GGK++R L L + AL A+E IH SL Sbjct: 29 SSLAIARPEKIYEAMRYSLLAGGKRLRPILCITACELCGGDEALALPTACALEMIHTMSL 88 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLPSMDN RRGKPT H Y E AI+AG+GLL YAFE + + Q Q++ Sbjct: 89 IHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVTHTPQADPQALLQVI 148 Query: 148 LSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L +G G++GGQ+LD++ E ET F I KTGAL+ + +GAI+A A+ Sbjct: 149 ARLGRTVGAAGLVGGQVLDLESEGRTDITPETLTF-IHTHKTGALLEASVLTGAILAGAT 207 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 +++RL + +N+G+ FQ+ DD+LD +E+L K Sbjct: 208 GEQQQRLARYAQNIGLAFQVVDDILDITATQEELGK 243 >gi|282916792|ref|ZP_06324550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139] gi|283770598|ref|ZP_06343490.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19] gi|282319279|gb|EFB49631.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139] gi|283460745|gb|EFC07835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19] Length = 293 Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 99/227 (43%), Positives = 136/227 (59%), Gaps = 7/227 (3%) Query: 13 SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 +K ID + ++L + S M TQ + +L ++ GGK+IR L+ N + Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+I Sbjct: 64 GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 SS +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 182 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 FA S A +A+A KE L + +LG++FQ+ DDLLDC D K Sbjct: 183 TFAVMSAADIANADDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|163797801|ref|ZP_02191747.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] gi|159176923|gb|EDP61489.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] Length = 295 Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 90/232 (38%), Positives = 135/232 (58%), Gaps = 8/232 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L + L E ++ ++ ++D LL Q RL SA+R+ A GGK++R FLV + A Sbjct: 4 LQAALAECAEDVERMMDLLLPQPEGA-----EARLYSAMRHSAFAGGKRLRPFLVMQSAR 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F V+ A RV AA+E +H YSLIHDDLP+MD+ +RRG+ + H ++DE TAI+AG+ L Sbjct: 59 QFGVDRRCAARVAAAVEFMHTYSLIHDDLPAMDDADMRRGRTSCHKEFDEATAILAGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 AFE + P+T +R++L+ L G +GM GGQM+D+ E +D + +Q Sbjct: 119 QALAFETLVMPETHSDPAVRAELVRDLARASGGRGMCGGQMMDLLAESTEMDIGAITRLQ 178 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++KTG + F+ SGAI+ L + + G+ FQ+ DDLLD D Sbjct: 179 RLKTGEMFAFSAVSGAILGKGPYRAYMALHNYAQEFGLAFQIVDDLLDATGD 230 >gi|145638945|ref|ZP_01794553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittII] gi|145271917|gb|EDK11826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittII] gi|309750914|gb|ADO80898.1| Geranyltranstransferase [Haemophilus influenzae R2866] Length = 296 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 138/240 (57%), Gaps = 19/240 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF--IDET 175 L ++AFEI++ NI ++ L+L + G+QGM GQ LD+ E I + Sbjct: 117 ALQSFAFEILTKTP-----NISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLS 171 Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 ++ +I + KTGAL+ A + G I + H + E+ L + E +G+ FQ+ DD+LD E D Sbjct: 172 ELELIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|293376580|ref|ZP_06622808.1| geranyltranstransferase [Turicibacter sanguinis PC909] gi|325839379|ref|ZP_08166818.1| geranyltranstransferase [Turicibacter sp. HGF1] gi|292644806|gb|EFF62888.1| geranyltranstransferase [Turicibacter sanguinis PC909] gi|325490499|gb|EGC92815.1| geranyltranstransferase [Turicibacter sp. HGF1] Length = 291 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 87/229 (37%), Positives = 139/229 (60%), Gaps = 8/229 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + ++ N K + ++ DL+ + + ++ + +L +++ +GGK++R L+ Sbjct: 2 LSTYIETNKKPFEKVMFDLI--ESEPIPSELKESMLYSLK---VGGKRLRPILLFAVLES 56 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 FN+ V AA+E IH YSLIHDDLP+MD+ +RRGKPT HI + E TAI+AG+ LL Sbjct: 57 FNLAPQKGYHVAAALEMIHTYSLIHDDLPAMDDDALRRGKPTNHIVFGEATAILAGDSLL 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182 T+AF++I+ + +L N R L+ +L+ G GM+ GQ+LD++ E + Q+ I Sbjct: 117 THAFKVIAEDE-RLTTNQRLSLIQALSLASGPMGMVAGQVLDMEAEVKAVSLEQLKQIHV 175 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 KTG L+ FA +GAI+A A +L+ F +LG+ FQ+ DD+LD E Sbjct: 176 NKTGRLIEFAIVAGAIIAQADDEVINQLKQFAYHLGLAFQIKDDILDVE 224 >gi|15837263|ref|NP_297951.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella fastidiosa 9a5c] gi|9105539|gb|AAF83471.1|AE003910_7 geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella fastidiosa 9a5c] Length = 291 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 87/221 (39%), Positives = 125/221 (56%), Gaps = 10/221 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTA 72 +R D+ L+ L + TQ RL +A+RY +L GK+IR LV LF+V+ Sbjct: 11 QRTDSYLERTL-----SIPTQAPQRLHAAMRYTVLSRGKRIRPLLVYAAGHLFHVDEPLL 65 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ G+ L T AFE ++ Sbjct: 66 DVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLA 125 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190 + ++R + +LTH G+ GM GGQ +DI +T + + +K+G LM Sbjct: 126 DAPSD--TSLRIAWLQTLTHAAGVAGMCGGQAIDIDATGQSQTLKALEAMHALKSGTLMR 183 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A GA+ S + L F LG+ FQ+ DD+LD E Sbjct: 184 AAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIE 224 >gi|308048592|ref|YP_003912158.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799] gi|307630782|gb|ADN75084.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799] Length = 294 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 82/203 (40%), Positives = 125/203 (61%), Gaps = 5/203 (2%) Query: 36 NDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + RLL A+RY LLGGK++R FLV ++ + AA+ECIH YSLIHDDLP+ Sbjct: 27 DPRLLDAMRYGTLLGGKRVRPFLVYATGTMLGAKEDDLDSLAAAVECIHAYSLIHDDLPA 86 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153 MD+ ++RRG+PTVHI +DE TAI+AG+ L A+E+++ +P + R ++ SL Sbjct: 87 MDDDHLRRGQPTVHIAFDEATAILAGDALQGLAYELLAEAPLPAALEGNRIAMLRSLARA 146 Query: 154 IGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKERL 210 G QGM GGQ +D+ + I+ + + ++KTGAL+ A E G+ +A + ++ L Sbjct: 147 SGYQGMCGGQAIDLASTGKRIELDALQQLHRLKTGALIRSAVEMGSYGVADLATEHRDAL 206 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + E +G+ FQ+ DD+LD D Sbjct: 207 LRYAEAIGLAFQVQDDILDITAD 229 >gi|309973121|gb|ADO96322.1| Geranyltranstransferase [Haemophilus influenzae R2846] Length = 296 Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 95/237 (40%), Positives = 137/237 (57%), Gaps = 13/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQSLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L ++AFEI++ +P + + L+ L G+QGM GQ LD+ E I +++ Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LVQILAQGSGVQGMCLGQSLDLISEHKQISLSELE 174 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233 +I + KTGAL+ A + G I + ++K + L + E +G+ FQ+ DD+LD E D Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC 6301] gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942] gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC 6301] gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942] Length = 301 Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 86/229 (37%), Positives = 133/229 (58%), Gaps = 11/229 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63 L S L+E ++++ L+ +L Q + ++RY+LL GK++R L Sbjct: 11 LKSYLKERQRQVEAALNAIL-------PPQDPPLIYESMRYSLLAEGKRLRPILCLASCE 63 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AL A+E +H SLIHDDLPSMDN RRG+PT H Y E AI+AG+ L Sbjct: 64 LAGGTAAIALPTACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDAL 123 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMI 180 LTYAFE I+ ++ + +++ +L +G +G++GGQ++D+Q E D+ + I Sbjct: 124 LTYAFEAIARHTPEVPADRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVNLETLHYI 183 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ + SGAI+A AS+ +E+LR + + +G+ FQ+ DD+LD Sbjct: 184 HTHKTGALLEVSVVSGAILAGASEELQEQLRTYAQKIGLAFQVIDDILD 232 >gi|260425613|ref|ZP_05779593.1| geranyltranstransferase [Citreicella sp. SE45] gi|260423553|gb|EEX16803.1| geranyltranstransferase [Citreicella sp. SE45] Length = 289 Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 85/196 (43%), Positives = 119/196 (60%), Gaps = 7/196 (3%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+RYA +GGK +R +LV E A L V AL AIE IH YSL+HDDLP MD+ +R Sbjct: 32 AMRYATVGGKGLRGWLVLEGARLHGVPQAQALWPACAIEAIHAYSLVHDDLPCMDDDDLR 91 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG PTVH ++DE TA++AG+ L FE+++ P+ +R+ L LSL G +GM+ Sbjct: 92 RGLPTVHRKWDEATAVLAGDALQALGFELVADPRCHPDAGVRADLTLSLARAAGARGMVL 151 Query: 162 GQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ LD+ E D ++ +Q KTGAL+ ++ E+GA +A A L + + L Sbjct: 152 GQALDMAAETADTPLTLDEITALQAGKTGALITWSAEAGARLAQADPGP---LTSYADRL 208 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ADD+LD E D Sbjct: 209 GLAFQIADDILDVEGD 224 >gi|116492587|ref|YP_804322.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745] gi|116102737|gb|ABJ67880.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745] Length = 296 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 87/236 (36%), Positives = 134/236 (56%), Gaps = 11/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN +++N + +D +D+L + N L ++Y++ GGK++R ++ Sbjct: 1 MNSNFDDFVKQNVELLDQHIDELF-----DSDSTLNTDLKMMMKYSIDAGGKRVRPLVLL 55 Query: 60 ECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 F + L V AA+E +H YSLIHDDLP+MDN +RRG+PT H ++ E AI+ Sbjct: 56 AILKAFGKTPNYDILTVAAALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKKFGEAEAIL 115 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 AG+ LLT AF+ ISS T LKD I+S+L+LSL + G GM+ GQ+LDIQ + Sbjct: 116 AGDALLTVAFQWISS--TNLKDRIKSELVLSLASDAGASGMIAGQLLDIQGNQRHYSLAE 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + +KTG ++ F E+ IM + E ++ F N G+ FQ+ DD++D E Sbjct: 174 LKHLHHLKTGKMLLFPAEAALIMKPSKLQVAELVKDFMANFGLAFQIHDDIIDVTE 229 >gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae WA1] gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae WA1] Length = 296 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 84/230 (36%), Positives = 143/230 (62%), Gaps = 14/230 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +L+E +K ID + D S ++ +++ + ++Y L GGK++R L LFN Sbjct: 10 RLEEINKTIDNVFD------KSDIELENS--FIEMLKYPLDAGGKRLRPILTCLACELFN 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ ++ A+E IH YSL+HDDLP+MDN +RRGKPT H++Y E AI+ G+GLLT+ Sbjct: 62 GDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTH 121 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 AF+++S KT +KD+ +L+ L++ G+ GM+ GQ +D+ +++ I+ + ++ K Sbjct: 122 AFQLLS--KTDVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHAKK 179 Query: 185 TGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TGA++ A GAI + + + N+ E + +GE +G+ FQ+ DD+LD D Sbjct: 180 TGAMIRGAIRLGAISSENINDNDIENITKYGEAIGLAFQIQDDILDVISD 229 >gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus WK1] gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus WK1] Length = 290 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 82/198 (41%), Positives = 122/198 (61%), Gaps = 4/198 (2%) Query: 42 AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+L GGK+IR L+ F + V A+E IH YSLIHDDLPSMDN + Sbjct: 32 AMLYSLQAGGKRIRPLLLLSTLHAFRKPIDIGMSVACALEMIHTYSLIHDDLPSMDNDDL 91 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H + E AI+AG+ LLTYAF++++ KT + +++ +L+ L G +GM+ Sbjct: 92 RRGKPTNHKVFGEANAILAGDALLTYAFQVVADDKT-ISSDVKVRLISELAKAAGPEGMV 150 Query: 161 GGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQ+ D++ E I Q+ I + KTG L+ ++ +GAI+ A++ + L F ++LG Sbjct: 151 GGQVADLEGEGKTISLQQLEYIHRHKTGKLLQYSIRAGAILGEATEQQLTLLTLFADHLG 210 Query: 219 IIFQLADDLLDCEEDLPK 236 + FQ+ DD+LD E D K Sbjct: 211 LAFQIRDDILDIEGDEQK 228 >gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54] Length = 303 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 16/238 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 P LQ + ++ +LDDLL A + RL A+RYA+LGG K++R+ LV Sbjct: 8 FPEWLQGRVRHVEDVLDDLL-PPADAVPA----RLHEAMRYAVLGGGKRVRAALVYAAGQ 62 Query: 64 LFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V+ + R AA+E IH YSL+HDDLP MD+ +RRG+PT H+Q+DE TA+ Sbjct: 63 ACPVSGSVLAVEASLDRAAAAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATAM 122 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175 +AG+ L AFE+++S + + Q SL G QGM GGQ +D+ + Sbjct: 123 LAGDALQPLAFELLAS--MPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRD 180 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 181 DLQLMHSMKTGAMLACSVALGGIVAGASSASRQALDVYAQAMGLAFQVVDDILDVTAD 238 >gi|302383899|ref|YP_003819722.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302194527|gb|ADL02099.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 301 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 85/197 (43%), Positives = 122/197 (61%), Gaps = 1/197 (0%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA LG GK++R + E + LF++ LR A+EC+H YSL+HDDLP MD Sbjct: 40 RLTEAMRYAALGPGKRLRPYFAMEASRLFDIEERPVLRAACALECVHAYSLVHDDLPCMD 99 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PT+H YDE TA++AG+ L T AF+I+ T NIR L L+ G Sbjct: 100 DDDMRRGRPTLHRAYDEATAVLAGDALQTAAFDILLHEDTHEDANIRCALAARLSLASGA 159 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 +GM GGQM+D+ D V +Q++KTGAL +A E I+A A++ + L F + Sbjct: 160 RGMAGGQMVDLLGVRDDLEGVARMQRLKTGALFTYAFEIPLIVARANERHCQALTDFAHD 219 Query: 217 LGIIFQLADDLLDCEED 233 +G+ +Q+ DDLLD + D Sbjct: 220 IGLAYQIVDDLLDFDGD 236 >gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1] Length = 292 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/218 (39%), Positives = 128/218 (58%), Gaps = 7/218 (3%) Query: 22 DLLLQTASHMQTQH---NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA 77 DL+ Q + + T++ N L A+ Y+L+ GGK++R L+ A V+ LR+ Sbjct: 11 DLINQQLNEIYTENMALNKDLAKAMNYSLMAGGKRLRPILIMAAADALGVDGEKFLRLST 70 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 +IE IH YSLIHDDLP+MDN RRGK T H + E AI+AG+ LLT AFEII++ K Sbjct: 71 SIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMAFEIIATDK-N 129 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACES 195 + + +++ ++ G +GM+GGQ++D+Q E ID + + KTGAL C A S Sbjct: 130 VDAETKIKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAAKTGALFCAAIRS 189 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAI+A A + + L + G+ FQ+ DD+LD D Sbjct: 190 GAILAGADEKQLANLTEYARQFGLAFQITDDILDVVGD 227 >gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF] gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF] Length = 295 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 87/222 (39%), Positives = 128/222 (57%), Gaps = 4/222 (1%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA 77 IL D L ++ N ++ A+RY++ GGK++R + +LF N L Sbjct: 12 ILTDKKLHHYLDVKEDKNKTVIDAMRYSIFAGGKRLRPIVAIATYNLFKDNLEEVLPYAC 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKT 136 A+E IH YSLIHDDLP+MD+ RRGK T H Y E AI+AG+ LL YAFEI IS +T Sbjct: 72 ALEMIHTYSLIHDDLPAMDDDNYRRGKLTNHKVYGEGIAILAGDALLNYAFEIMISHART 131 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 Q N+ Q + + G+ GM+GGQ++D++ E +D+ + I KT AL+ A + Sbjct: 132 QSNANVHLQAIEEIAKAAGMNGMIGGQVVDLESENKQVDKNTLNYIHYNKTAALIISAFK 191 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 GAI+A A++ + + G+N+G+ FQ+ DD+LD D K Sbjct: 192 VGAIIAEATETDIAHMNSLGKNIGLAFQIQDDILDIIGDEKK 233 >gi|194366666|ref|YP_002029276.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3] gi|194349470|gb|ACF52593.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3] Length = 292 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 123/220 (55%), Gaps = 10/220 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTAL 73 RI++ LD L A Q RL A+RY++LGG K++R LV LF + Sbjct: 13 RIESQLDAALPSPAEAPQ-----RLHQAMRYSVLGGGKRMRPLLVYASGQLFGAQPESLD 67 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+AG+ L T AF +++ Sbjct: 68 AAAMAVELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQTRAFGLLAD 127 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCF 191 L +R + +L H G GM GGQ LDI +T + + +KTGAL+ Sbjct: 128 --APLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKTGALIRA 185 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A GA+ A + + +L F + LG+ FQ+ DD+LD E Sbjct: 186 AVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVE 225 >gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263] Length = 309 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 126/204 (61%), Gaps = 7/204 (3%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D ++SA++Y+L GGK++R L+ E ++F + A+ AIE IH YSLIHDDLP+M Sbjct: 41 DIIVSAMKYSLFAGGKRVRPILLMETCAMFGGDERVAIPFACAIEMIHTYSLIHDDLPAM 100 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT---H 152 DN +RRG+PT H Y E AI+AG+ LL A E ++ R++ + +L+ Sbjct: 101 DNDDLRRGEPTNHKVYGENIAILAGDALLNAAVETAVEGIETMEPAERARGIAALSLLMR 160 Query: 153 NIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G+ GM+GGQ D+ D+ I+E ++ I KTGAL+ A GA++A AS++E++ Sbjct: 161 AAGVNGMIGGQTGDLLAEDDDAINEDKIVYIHAHKTGALLTAAVLIGAVLAGASEDEQQA 220 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 LR +G +G+ FQ+ DD+LD E + Sbjct: 221 LRNYGSAIGMAFQVVDDILDVESE 244 >gi|157376460|ref|YP_001475060.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3] gi|157318834|gb|ABV37932.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3] Length = 293 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 83/201 (41%), Positives = 120/201 (59%), Gaps = 3/201 (1%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q + +L +A+++ AL+GGK+IR FLV + NV AAIEC+H YSLIHD Sbjct: 24 QATTDLKLQAAMKHGALIGGKRIRPFLVYAIGDMLNVAPEKLDACAAAIECVHAYSLIHD 83 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP+MD+ +RRG+PTVHI +DE TAI+AG+ L AFE I P + + ++ +L Sbjct: 84 DLPAMDDDALRRGQPTVHIAFDEATAILAGDALQALAFESICEPINGITPSQNLAMVRAL 143 Query: 151 THNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G GM GGQ +D+ D+ ID + + ++KTGAL+ A E I A + E+ Sbjct: 144 AKASGYSGMCGGQAMDLNATDKQIDLATLTKLHRLKTGALIRCAVELPMIAAAVTVEEQN 203 Query: 209 RLRCFGENLGIIFQLADDLLD 229 L F + +G+ FQ+ DD+LD Sbjct: 204 LLMDFADAIGLAFQVQDDVLD 224 >gi|169828970|ref|YP_001699128.1| geranyltranstransferase [Lysinibacillus sphaericus C3-41] gi|168993458|gb|ACA40998.1| Geranyltranstransferase [Lysinibacillus sphaericus C3-41] Length = 293 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 81/185 (43%), Positives = 116/185 (62%), Gaps = 4/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V L+ N L VGA IE IH YSLIHDDLPSMDN RRGKPT H Sbjct: 44 GGKRIRPLFVLAVLELYRKNLQDGLIVGAVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y E A +AG+ L T AF I++ + + R +L+ L+ G +GM+GGQ+LD++ Sbjct: 104 KVYGEALATLAGDALNTLAFGILA--RMDVTAEKRIELVQLLSVAAGAEGMVGGQVLDME 161 Query: 169 DE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E +D T++ + KTGAL+ F+ E+GA++A AS+ ++ L+ + ++G+ FQ+ DD Sbjct: 162 GEQRQLDLTELEQVHVNKTGALLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDD 221 Query: 227 LLDCE 231 +LD E Sbjct: 222 ILDIE 226 >gi|56416957|ref|YP_154031.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma marginale str. St. Maries] gi|222475323|ref|YP_002563740.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Florida] gi|56388189|gb|AAV86776.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma marginale str. St. Maries] gi|222419461|gb|ACM49484.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Florida] Length = 291 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 4/229 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65 S +Q+ + +++ L Q + L A+ Y + GK IRSFL + A +F Sbjct: 11 SDIQQKVEDFASLVQKELAQVVHEKAECPSAALHEALGYVISNPGKCIRSFLASTSAQVF 70 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V+ LR+ AAIE +H YSL+HDDLPSMDN IRRGK + HI++ E A++ GN LLT Sbjct: 71 GVSTERTLRLSAAIEVVHAYSLVHDDLPSMDNSPIRRGKESCHIKFGEAVAVLTGNALLT 130 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMK 184 FE++S+ +R +++ L+ G GM+ GQMLD++ + V I ++K Sbjct: 131 LTFELLSTMNEGCA--VRCEIIELLSKACGRCGMIAGQMLDMEAHSSTSFEGVRRIHELK 188 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T L ACE+GA++ AS E+ L +G LG FQ DDL D ED Sbjct: 189 TARLFSAACEAGAVLGGASAEERAALAKYGAALGCAFQAKDDLSDAWED 237 >gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822] gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis] Length = 303 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 87/234 (37%), Positives = 132/234 (56%), Gaps = 16/234 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 L+E ++ ++ +LD+LL A T RL A+RYA+LGG K++R+ LV V Sbjct: 12 LRERAQHVEHVLDELL-PGADIAPT----RLHEAMRYAVLGGGKRVRAVLVYAAGQACPV 66 Query: 68 NHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 N T R AA+E IH YSL+HDDLP MD+ +RRG+PTVH+Q+DE TA++AG+ Sbjct: 67 NGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGD 126 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179 L AFE+++ + + Q L G QGM GGQ +D+ + ++ Sbjct: 127 ALQPLAFELLAG--MPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQT 184 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 185 MHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTAD 238 >gi|254995136|ref|ZP_05277326.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Mississippi] gi|255003306|ref|ZP_05278270.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Puerto Rico] gi|255004432|ref|ZP_05279233.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Virginia] Length = 286 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 4/229 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65 S +Q+ + +++ L Q + L A+ Y + GK IRSFL + A +F Sbjct: 6 SDIQQKVEDFASLVQKELAQVVHEKAECPSAALHEALGYVISNPGKCIRSFLASTSAQVF 65 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V+ LR+ AAIE +H YSL+HDDLPSMDN IRRGK + HI++ E A++ GN LLT Sbjct: 66 GVSTERTLRLSAAIEVVHAYSLVHDDLPSMDNSPIRRGKESCHIKFGEAVAVLTGNALLT 125 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMK 184 FE++S+ +R +++ L+ G GM+ GQMLD++ + V I ++K Sbjct: 126 LTFELLSTMNEGCA--VRCEIIELLSKACGRCGMIAGQMLDMEAHSSTSFEGVRRIHELK 183 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T L ACE+GA++ AS E+ L +G LG FQ DDL D ED Sbjct: 184 TARLFSAACEAGAVLGGASAEERAALAKYGAALGCAFQAKDDLSDAWED 232 >gi|126653065|ref|ZP_01725200.1| YqiD [Bacillus sp. B14905] gi|126590166|gb|EAZ84290.1| YqiD [Bacillus sp. B14905] Length = 293 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 80/185 (43%), Positives = 117/185 (63%), Gaps = 4/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V L+ N L VG+ IE IH YSLIHDDLPSMDN RRGKPT H Sbjct: 44 GGKRIRPLFVLAVLELYQKNLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y E A +AG+ L T AF I++ + ++ R +L+ L+ G +GM+GGQ+LD++ Sbjct: 104 KVYGEALATLAGDALNTLAFGILA--RMEVTAEKRIELVQLLSVAAGAEGMVGGQVLDME 161 Query: 169 DE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E +D T++ + KTGAL+ F+ E+GA++A AS+ ++ L+ + ++G+ FQ+ DD Sbjct: 162 GEQRQLDLTELEQVHVNKTGALLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDD 221 Query: 227 LLDCE 231 +LD E Sbjct: 222 ILDIE 226 >gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium thermophilum] Length = 292 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 9/224 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 E ++ LD L+ T R+ A+RY+L+ GGK++R LV F Sbjct: 6 FAEKVPEVNRWLDRLMPPA-----TTFPPRIHEAMRYSLMAGGKRLRPILVLAAGEAFGG 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 V A E +H YSLIHDDLP+MDN +RRG PT H Q+DE TAI+AG+GL+T+A Sbjct: 61 APERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMTHA 120 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F I++ + +R L++ ++GM+ GQ++D++ E ID ++ I + KT Sbjct: 121 FRILAEMDAPAEQKVRVIRELAVGSGT-VEGMIAGQIVDLEAERKPIDAERLKFIHRAKT 179 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GAL+ A G I+A A++++ L +G+ +G+ FQ+ADD+LD Sbjct: 180 GALIRGAVVCGGIVAGATESDLALLAAYGDRVGLAFQIADDILD 223 >gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila UWE25] gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia amoebophila UWE25] Length = 294 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 92/224 (41%), Positives = 132/224 (58%), Gaps = 9/224 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 LQ S+ I+ LD L+ S H + L+ A RYALL GGK++R L + Sbjct: 8 LQTQSQLIEKRLDQLV----SKRHGPHQN-LIEAARYALLSGGKRLRPILALTTVQTLHG 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AL +E IH YSLIHDDLP MDN RRGK TVH QY E A++ G+ LLTYA Sbjct: 63 DIQEALSPACTLELIHTYSLIHDDLPCMDNDDYRRGKLTVHRQYSEGHAVLTGDFLLTYA 122 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 FE++++ K L + +L+ L+ G GM+GGQ LD+ E I+ + ++ + KT Sbjct: 123 FELLATDK-YLTSEKKVKLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLLHRNKT 181 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AL+ + E G I+A+A++ + +R FGEN+G+ FQ+ DD+LD Sbjct: 182 AALITASVEFGGILANATEEQLAHIREFGENIGLAFQITDDILD 225 >gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I] gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I] gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS] Length = 303 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 87/234 (37%), Positives = 132/234 (56%), Gaps = 16/234 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 L+E ++ ++ +LD+LL A T RL A+RYA+LGG K++R+ LV V Sbjct: 12 LRERAQHVEHVLDELL-PGADIAPT----RLHEAMRYAVLGGGKRVRAALVYAAGQACPV 66 Query: 68 NHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 N T R AA+E IH YSL+HDDLP MD+ +RRG+PTVH+Q+DE TA++AG+ Sbjct: 67 NGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGD 126 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179 L AFE+++ + + Q L G QGM GGQ +D+ + ++ Sbjct: 127 ALQPLAFELLAG--MPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQT 184 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 185 MHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTAD 238 >gi|127513698|ref|YP_001094895.1| polyprenyl synthetase [Shewanella loihica PV-4] gi|126638993|gb|ABO24636.1| farnesyl-diphosphate synthase [Shewanella loihica PV-4] Length = 293 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 81/186 (43%), Positives = 112/186 (60%), Gaps = 2/186 (1%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 AL+GGK+IR FLV + V AAIECIH YSLIHDDLP+MD+ +RRG+P Sbjct: 39 ALIGGKRIRPFLVYAVGEMLGVPLERLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQP 98 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVHI ++E TAI+AG+ L T AFEIIS +L + + ++ +L G GM GGQ + Sbjct: 99 TVHIAFNEATAILAGDALQTLAFEIISQEGGELSASQQLAMVRALAKASGYSGMCGGQAM 158 Query: 166 DIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D+ D ID + + ++KTGAL+ A E I A + + L F + +G+ FQ+ Sbjct: 159 DLNATDRQIDLETLKRLHRLKTGALIRCAVELPIIAAKVTDEQASHLLTFADAIGLAFQV 218 Query: 224 ADDLLD 229 DD+LD Sbjct: 219 QDDVLD 224 >gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1] gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1] Length = 294 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 84/232 (36%), Positives = 130/232 (56%), Gaps = 8/232 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 +L++ S+++D LD + + ++ H A+RY++ GGK++R LV Sbjct: 6 ELKQWSQKVDEALDRYIPSSDAYPSVIHE-----AMRYSIFAGGKRLRPILVLAATQAVG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N + V A+E IH YSL+HDDLP+MDN RRG+PT H Y E AI+ G+ L T Sbjct: 61 GNTEKVMPVACAMELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALQTL 120 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 AFE+I+ + + +Q+ L + G G++GGQ++DI ++ ID + I + K Sbjct: 121 AFELIAQTTESFEADRVNQVTLEIAKAAGSSGLIGGQVVDILSENRDIDGDTLEYIHRHK 180 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 TGAL + +GAI+ A+ N+ L + E +G+ FQ+ DDLLD E D K Sbjct: 181 TGALFRASIRAGAILGGATVNQLAALTLYAEQMGLAFQIKDDLLDIEGDEAK 232 >gi|163737897|ref|ZP_02145313.1| branched-chain amino acid aminotransferase [Phaeobacter gallaeciensis BS107] gi|163743327|ref|ZP_02150707.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis 2.10] gi|161383321|gb|EDQ07710.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis 2.10] gi|161388513|gb|EDQ12866.1| branched-chain amino acid aminotransferase [Phaeobacter gallaeciensis BS107] Length = 299 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 133/223 (59%), Gaps = 12/223 (5%) Query: 20 LDDLLLQTASHMQTQ--HNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77 L D + +HM + +D L +A+RYA+ GGK +R FLV E A L V AL Sbjct: 21 LKDAQTRITTHMDARLGGDDALHAAMRYAVTGGKMLRGFLVLESARLHGVAEAAALEAAL 80 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIECIH YSL+HDDLP MD+ +RRG+PTVH ++DE A++AG+ L T+AFE+++ P+ Sbjct: 81 AIECIHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEAMAVLAGDSLQTFAFELLADPRIG 140 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFAC 193 L+ L G GM+ GQMLDI E +D Q+ +Q KTG L+ ++ Sbjct: 141 PH---ALTLIRGLAQASGKDGMVSGQMLDIAAETATRPLDLEQITHLQNRKTGCLISWSA 197 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +GA+MA A + LR + + LG+ FQ+ADD+LD E D K Sbjct: 198 TAGAVMAGADEAP---LRRYADALGLAFQIADDILDVEGDAAK 237 >gi|327439759|dbj|BAK16124.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris StLB046] Length = 294 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 78/185 (42%), Positives = 119/185 (64%), Gaps = 3/185 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V ++N + T+ VG+A+E IH YSLIHDDLPSMD+ +RRGKPT H Sbjct: 44 GGKRIRPLFVVAVCEMYNQSLETSYTVGSAVEMIHTYSLIHDDLPSMDDDELRRGKPTNH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + Y E A +AG+ L T AF +I+ L R +L+ L+ G +GM+GGQ+LD+ Sbjct: 104 VVYGEALATLAGDALNTLAFGVIARL-NNLSAEKRIELVNLLSVAAGTEGMVGGQVLDMD 162 Query: 169 DE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E ++ ++ + KTGAL+ F+ E+GA++A+AS +++E L + ++G+ FQ+ DD Sbjct: 163 GEKRLLNLKELETVHVNKTGALLRFSIEAGAVLANASISDREALVEYAHHIGLAFQIQDD 222 Query: 227 LLDCE 231 +LD E Sbjct: 223 ILDIE 227 >gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter sp. Re1] gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter sp. Re1] Length = 296 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 9/201 (4%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+ Y+ L GGK++R +V + A LF +++ + IE IH YSLIHDDLP MD Sbjct: 32 KLHEAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPVMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGKPT H Y + A++AG+ LLT+AF I+ K I ++ + + L Sbjct: 92 NDDFRRGKPTCHKIYGDAVALLAGDALLTHAFATIA--KNSKISGINPDAVVDVIEKVSL 149 Query: 157 Q----GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 GM+GGQ +DI + + +F I KTG LM + SGA +A AS+ + E + Sbjct: 150 AAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVSFWSGARLAGASKEDLETI 209 Query: 211 RCFGENLGIIFQLADDLLDCE 231 +CFGE LG+IFQ+ DD+LD + Sbjct: 210 KCFGEKLGLIFQIVDDILDIK 230 >gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50] gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50] Length = 303 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 85/234 (36%), Positives = 130/234 (55%), Gaps = 16/234 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 L+E ++ ++ +LD+LL RL A+RYA+LGG K++R+ LV V Sbjct: 12 LRERAQHVEHVLDELLPGA-----DIAPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPV 66 Query: 68 NHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 N T R AA+E IH YSL+HDDLP MD+ +RRG+PTVH+Q+DE TA++AG+ Sbjct: 67 NGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGD 126 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179 L AFE+++ + + Q L G QGM GGQ +D+ + ++ Sbjct: 127 ALQPLAFELLAG--MPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQT 184 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 185 MHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTAD 238 >gi|20429115|emb|CAD24425.1| geranyl-diphosphate synthase [Paracoccus zeaxanthinifaciens] Length = 287 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 86/197 (43%), Positives = 127/197 (64%), Gaps = 8/197 (4%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 L A+RYA+ GGK++R+FLV E A L ++ +L V AA+E +H YSL+HDDLP+MD+ Sbjct: 28 LSDAMRYAVQGGKRLRAFLVMESARLHGLDDDASLPVAAAVEALHAYSLVHDDLPAMDDD 87 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG+PTVH+++ E TAI+AG+ L T AF++++ P+ D R +L+ SL G G Sbjct: 88 DLRRGQPTVHVKWTEATAILAGDALQTLAFQLLADPRVG-DDAARMRLVGSLAQASGAAG 146 Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M+ GQ LDI E +D + +Q KTGAL+ FA +G +MA A + L + Sbjct: 147 MVWGQALDIAAETSGVPLDLDAIIRLQGGKTGALIRFAATAGPLMAGA---DPAALDDYA 203 Query: 215 ENLGIIFQLADDLLDCE 231 + +G+ FQ+ADD+LD E Sbjct: 204 QAVGLAFQIADDILDVE 220 >gi|146278824|ref|YP_001168983.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145557065|gb|ABP71678.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025] Length = 289 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 126/202 (62%), Gaps = 8/202 (3%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 ++ A+RYA+ GGK++R FLV E A L + A+ A+IE +H YSL+HDD+P MD+ Sbjct: 30 VVHAMRYAVQGGKRLRGFLVLESARLHGIVPEAAVSAAASIEALHAYSLVHDDMPCMDDD 89 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG PTVH ++DE TA++AG+ L T AFE+++ P +R +L+ +L G +G Sbjct: 90 DLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAEVRIRLVETLAKASGAEG 148 Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M+ GQ LDI E + Q+ +Q KTGAL+C++ E+GAI+ A LR + Sbjct: 149 MVLGQALDIAAETAAVPLTLEQITHLQAGKTGALICWSAEAGAILGQADTGP---LRRYA 205 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 LG+ FQ+ADD+LD E D K Sbjct: 206 TALGLAFQIADDILDVEGDADK 227 >gi|197284007|ref|YP_002149879.1| geranyltranstransferase [Proteus mirabilis HI4320] gi|227358123|ref|ZP_03842464.1| geranyltranstransferase [Proteus mirabilis ATCC 29906] gi|194681494|emb|CAR40356.1| geranyltranstransferase [Proteus mirabilis HI4320] gi|227161459|gb|EEI46496.1| geranyltranstransferase [Proteus mirabilis ATCC 29906] Length = 307 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 99/231 (42%), Positives = 131/231 (56%), Gaps = 16/231 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRY-ALLGGKKIRSFLVTECASLF 65 KL +R+D L+ L QT +D LS A+RY ALLGGK++R FLV +F Sbjct: 14 KLHSAHQRVDEALNQAL-QT-----LPFSDMPLSQAMRYGALLGGKRLRPFLVYAVGEMF 67 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 NV AAIECIH YSLIHDDLP+MDN +RRGKPT HI++ E AI+AG+ L T Sbjct: 68 NVPVANLDVPAAAIECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILAGDALQT 127 Query: 126 YAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180 AFEI++ P + D R ++ L GL GM GGQ LD+ +D+ ID + I Sbjct: 128 LAFEILAKNAMPDVAIAD--RVAMIAELATASGLAGMCGGQALDLDAEDKSIDLVALEKI 185 Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTGAL+ A GA+ A + L + ++G+ FQ+ DD+LD Sbjct: 186 HLHKTGALIRAAVRLGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDV 236 >gi|159045835|ref|YP_001534629.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12] gi|157913595|gb|ABV95028.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12] Length = 291 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 92/237 (38%), Positives = 133/237 (56%), Gaps = 14/237 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 G + + + RI LDDL+ Q + + YA GGK++R LV E A Sbjct: 3 GFAAAQADGATRIAACLDDLI-------GAQPESVIRDGMAYATRGGKRLRGVLVLETAW 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L V A+ AAIEC+H YSL+HDDLP+MD+ +RRG+PTVH+++DE +AI+ G+ L Sbjct: 56 LHGVAPERAVYAAAAIECLHAYSLVHDDLPAMDDDDLRRGQPTVHVKWDEASAILVGDAL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFM 179 T AFE +S P+ + L+ SL G GM+ GQ LDI E ++ Sbjct: 116 QTLAFEALSDPRMTDDPAVALALVRSLAQASGAAGMVLGQALDIAAETAAAPLSLDEITR 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +Q KTGAL+ ++ E+GA++A A + LR + E +G+ FQ+ADD+LD D K Sbjct: 176 LQAGKTGALIRWSAEAGALLARA---DPAPLRRYAEAIGLAFQIADDILDVTGDAEK 229 >gi|289434644|ref|YP_003464516.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170888|emb|CBH27430.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 293 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 82/190 (43%), Positives = 115/190 (60%), Gaps = 3/190 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV V+ ++ ++V A+E IH YSLIHDDLP+MDN RRGK T H Sbjct: 43 GGKRIRPMLVFATLQALQVDPMSGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNH 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y + TAI+AG+ LLT AF I++ + L R L+ ++ + G +GM+GGQ D++ Sbjct: 103 KVYGDATAILAGDALLTLAFSILAEDE-NLSFETRIGLINQISFSSGAEGMVGGQQADME 161 Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E T ++ I KTG L+ FA S A +A AS + +RLR F EN+G+ FQ++DD Sbjct: 162 AENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQISDD 221 Query: 227 LLDCEEDLPK 236 +LD D K Sbjct: 222 ILDVIGDETK 231 >gi|254994133|ref|ZP_05276323.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL J2-064] Length = 233 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 126/215 (58%), Gaps = 6/215 (2%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 ++D+ L + S + RL ++ Y++ GGK+IR LV VN L ++ Sbjct: 14 VIDESLFKEISERNIEP--RLKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTAT 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I++ + Sbjct: 72 ALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDE-N 130 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACES 195 L R L+ ++ + G +GM+GGQ+ D++ E T ++ I KTG L+ FA S Sbjct: 131 LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTS 190 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A +A A + +RLR F EN+GI FQ++DD+LD Sbjct: 191 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDV 225 >gi|46907589|ref|YP_013978.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str. F2365] gi|47093750|ref|ZP_00231500.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858] gi|226223964|ref|YP_002758071.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes Clip81459] gi|254932322|ref|ZP_05265681.1| geranyltranstransferase [Listeria monocytogenes HPB2262] gi|46880857|gb|AAT04155.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str. F2365] gi|47017871|gb|EAL08654.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858] gi|225876426|emb|CAS05135.1| Putative Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583878|gb|EFF95910.1| geranyltranstransferase [Listeria monocytogenes HPB2262] gi|328467501|gb|EGF38570.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 1816] gi|328475077|gb|EGF45865.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 220] gi|332311804|gb|EGJ24899.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A] Length = 293 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 126/215 (58%), Gaps = 6/215 (2%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 ++D+ L + S + RL ++ Y++ GGK+IR LV VN L ++ Sbjct: 14 VIDESLFKEISERNIEP--RLKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTAT 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I++ + Sbjct: 72 ALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDE-N 130 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACES 195 L R L+ ++ + G +GM+GGQ+ D++ E T ++ I KTG L+ FA S Sbjct: 131 LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTS 190 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A +A A + +RLR F EN+GI FQ++DD+LD Sbjct: 191 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDV 225 >gi|190575335|ref|YP_001973180.1| putative geranyltranstransferase [Stenotrophomonas maltophilia K279a] gi|190013257|emb|CAQ46891.1| putative geranyltranstransferase [Stenotrophomonas maltophilia K279a] Length = 292 Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 123/220 (55%), Gaps = 10/220 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTAL 73 RI++ LD L A Q RL A+RY++LGG K++R LV LF + Sbjct: 13 RIESQLDAALPSPAEAPQ-----RLHQAMRYSVLGGGKRMRPLLVYASGHLFGTQPESLD 67 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++E IH YSL+HDDLP+MD+ +RRGKPT H+ +DE TAI+AG+ L T AF +++ Sbjct: 68 AAAMSVELIHAYSLVHDDLPAMDDDALRRGKPTTHVAFDEATAILAGDALQTRAFGLLAD 127 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCF 191 L +R + +L H G GM GGQ LDI +T + + +KTGAL+ Sbjct: 128 --APLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKTGALIRA 185 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A GA+ A + + +L F + LG+ FQ+ DD+LD E Sbjct: 186 AVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVE 225 >gi|254852589|ref|ZP_05241937.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503] gi|300765397|ref|ZP_07075379.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017] gi|258605902|gb|EEW18510.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503] gi|300513834|gb|EFK40899.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017] Length = 293 Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 126/215 (58%), Gaps = 6/215 (2%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 ++D+ L + S + RL ++ Y++ GGK+IR LV VN L ++ Sbjct: 14 VIDESLFKEISERNIEP--RLKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTAT 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I++ + Sbjct: 72 ALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDE-N 130 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACES 195 L R L+ ++ + G +GM+GGQ+ D++ E T ++ I KTG L+ FA S Sbjct: 131 LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTIEELSSIHARKTGELLIFAVTS 190 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A +A A + +RLR F EN+GI FQ++DD+LD Sbjct: 191 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDV 225 >gi|103487675|ref|YP_617236.1| polyprenyl synthetase [Sphingopyxis alaskensis RB2256] gi|98977752|gb|ABF53903.1| farnesyl-diphosphate synthase [Sphingopyxis alaskensis RB2256] Length = 306 Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 95/226 (42%), Positives = 133/226 (58%), Gaps = 8/226 (3%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69 E ++ ID + D LL A L A+RYA + GGK++R LV LF+V+ Sbjct: 21 EVAEGIDALFDQLLAVPADP-----RGPLYEAMRYAAIAGGKRLRPLLVRAAGDLFHVDR 75 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 LRVGAA+E +H YSLIHDDLP MD+ +RRGKPT H + E TA++AG+ L AFE Sbjct: 76 ALTLRVGAAVEAMHVYSLIHDDLPCMDDDDMRRGKPTTHKAFGEATAVLAGDSLHALAFE 135 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187 + P T +R++L L G GM GGQM+D+ E D V +Q++KTGA Sbjct: 136 WLCDPATSADPFVRAELCCELARAAGPAGMAGGQMMDLAAETSDFDLPTVTRLQQLKTGA 195 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ F+ E+GAI+A + LR + ++G+ FQ+ADD++D E D Sbjct: 196 LIAFSVEAGAILARIPAEGRRPLRGYARDIGLAFQIADDIMDVEGD 241 >gi|254824578|ref|ZP_05229579.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194] gi|293593816|gb|EFG01577.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194] Length = 293 Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 118/196 (60%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL ++ Y++ GGK+IR LV VN L ++ A+E IH YSLIHDDLP+MD Sbjct: 31 RLKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGK T H + + TAI+AG+ LLT AF I++ + L R L+ ++ + G Sbjct: 91 NDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISFSSGA 149 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM+GGQ+ D++ E T ++ I KTG L+ FA S A +A A + +RLR F Sbjct: 150 EGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFA 209 Query: 215 ENLGIIFQLADDLLDC 230 EN+GI FQ++DD+LD Sbjct: 210 ENIGIGFQISDDILDV 225 >gi|170761674|ref|YP_001787211.1| geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree] gi|169408663|gb|ACA57074.1| putative geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree] Length = 290 Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 85/216 (39%), Positives = 133/216 (61%), Gaps = 6/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L+ + ++ ++ A+ Y+L GGK+IR L SL+ ++ A+ + AAIE Sbjct: 12 ELWLKEYLDNKGNYDKKIYEAMIYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ + LK+ Sbjct: 72 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197 + + ++T G+ GM+GGQ++DI +D+ I +++ + K KTGAL+ + +GA Sbjct: 130 GEEALKACYTITKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGA 189 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+ A+ + E L +G+NLG+ FQ+ DD+LD E D Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225 >gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland] gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland] Length = 290 Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 84/216 (38%), Positives = 133/216 (61%), Gaps = 6/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L+ + ++ ++ A+ Y+L GGK+IR L SL+ ++ A+ + AAIE Sbjct: 12 ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ + LK+ Sbjct: 72 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + ++ G+ GM+GGQ++DI +D+ I +++ + K KTGAL+ + +GA Sbjct: 130 GEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGA 189 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+ A+ + E L +G+NLG+ FQ+ DD+LD E D Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225 >gi|315303030|ref|ZP_07873740.1| geranyltranstransferase [Listeria ivanovii FSL F6-596] gi|313628597|gb|EFR97020.1| geranyltranstransferase [Listeria ivanovii FSL F6-596] Length = 293 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/221 (38%), Positives = 127/221 (57%), Gaps = 6/221 (2%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 ++DD LL + + +L ++ Y++ GGK+IR LV N + + ++ Sbjct: 14 VMDDSLLTEINKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNTDPMRGVKTAT 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH YSLIHDDLP+MDN RRGK T H Y + TAI+AG+ LLT AF +++ Sbjct: 72 ALEMIHTYSLIHDDLPAMDNDDYRRGKRTNHKVYGDATAILAGDALLTLAFSVLAE-DAN 130 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACES 195 L R L+ L+ + G +GM+GGQ D++ E I ++ I KTG L+ FA S Sbjct: 131 LTFETRLALINELSFSSGAEGMVGGQQADMEAENKKITLEELATIHARKTGELLIFAVTS 190 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A +A A+ + +RLR F EN+G+ FQ++DD+LD D K Sbjct: 191 AAKIAEATPEQTKRLRIFAENIGVGFQISDDILDVIGDETK 231 >gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8] gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8] Length = 303 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/238 (35%), Positives = 133/238 (55%), Gaps = 16/238 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 P LQ + ++ +LDDLL A + + RL A+RYA+LGG K++R+ LV Sbjct: 8 FPEWLQGRVQHVEDVLDDLL-PPADALPS----RLHEAMRYAVLGGGKRVRAALVYAAGQ 62 Query: 64 LFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V+ + R AA+E IH YSL+HDDLP MD+ +RRG+PT H+++DE TA+ Sbjct: 63 ACPVSGSVLAVQASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVKFDEATAM 122 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175 +AG+ L AF++++S + + Q SL G QGM GGQ +D+ + Sbjct: 123 LAGDALQPLAFDLLAS--MPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGHALSRD 180 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ + MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 181 ELQTMHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTAD 238 >gi|313633363|gb|EFS00206.1| geranyltranstransferase [Listeria seeligeri FSL N1-067] Length = 293 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 83/190 (43%), Positives = 114/190 (60%), Gaps = 3/190 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV V+ + ++V A+E IH YSLIHDDLP+MDN RRGK T H Sbjct: 43 GGKRIRPMLVFATLQALQVDPMRGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNH 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y + TAI+AG+ LLT AF I++ + L R L+ ++ + G +GM+GGQ D++ Sbjct: 103 KVYGDATAILAGDALLTLAFSILAEDE-NLSFETRIGLINQISFSSGAEGMVGGQQADME 161 Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E T ++ I KTG L+ FA S A +A AS + +RLR F EN+GI FQ++DD Sbjct: 162 AENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAENIGIGFQISDD 221 Query: 227 LLDCEEDLPK 236 +LD D K Sbjct: 222 ILDVIGDETK 231 >gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2] gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2] Length = 296 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 95/231 (41%), Positives = 137/231 (59%), Gaps = 14/231 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 + QE + +D +L + A H++ A+RY+LL GGK+IR L A Sbjct: 10 RCQEVEQALDQLLPPIEGPLAGHVE---------AMRYSLLAGGKRIRPILCLAAAEALP 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + L V AA+ECIH YSLIHDDLP+MD+ +RRG PT H ++ E AI+AG+GLL++ Sbjct: 61 TDSRPLLPVAAALECIHTYSLIHDDLPAMDDDDLRRGNPTCHKKFGEAAAILAGDGLLSF 120 Query: 127 AFEIISSPKTQLKDNIRSQLML--SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182 AFE+++ P + QL L ++ IG GM+GGQ+LDI+ E I+ Q+ I + Sbjct: 121 AFELLARPLATKNISAGEQLHLIGNIAAAIGPMGMVGGQVLDIEAEGRQIELEQLQQIHR 180 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ A +SGAI A + + E L +GE +G+ FQ+ DDLL+ D Sbjct: 181 CKTGALITVAVQSGAIGGGADRRQYEALTSYGEQIGLAFQIVDDLLNVTGD 231 >gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto] gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto] Length = 290 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 84/216 (38%), Positives = 133/216 (61%), Gaps = 6/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L+ + ++ ++ A+ Y+L GGK+IR L SL+ ++ A+ + AAIE Sbjct: 12 ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ + LK+ Sbjct: 72 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + ++ G+ GM+GGQ++DI +D+ I +++ + K KTGAL+ + +GA Sbjct: 130 GEKAVKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGA 189 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+ A+ + E L +G+NLG+ FQ+ DD+LD E D Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225 >gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916] gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916] Length = 290 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 84/216 (38%), Positives = 133/216 (61%), Gaps = 6/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L+ + ++ ++ A+ Y+L GGK+IR L SL+ ++ A+ + AAIE Sbjct: 12 ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ + LK+ Sbjct: 72 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + ++ G+ GM+GGQ++DI +D+ I +++ + K KTGAL+ + +GA Sbjct: 130 GEKAVKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGA 189 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+ A+ + E L +G+NLG+ FQ+ DD+LD E D Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225 >gi|165976224|ref|YP_001651817.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876325|gb|ABY69373.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 297 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 129/201 (64%), Gaps = 6/201 (2%) Query: 35 HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 ++ L+ A+ YA LLGGK++R FL+ + +V AA+E IH YSL+HDDLP Sbjct: 30 YDSALIEAMSYAVLLGGKRVRPFLIYATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLP 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT HI +DE TAI+AG+ L ++AFE+I+ ++ L D+ + + + SLT Sbjct: 90 AMDDDKLRRGKPTCHIAFDEATAILAGDALQSFAFELIAQDES-LTDSQKVRQIQSLTQA 148 Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN--EKER 209 G +GM GQ LD+ +D+ ++ ++ +I + KTGAL+ + G ++ SQN K++ Sbjct: 149 AGARGMCLGQSLDLLAEDKAVNLAELELIHRNKTGALIIASVLMGFNLSAHSQNLAVKQQ 208 Query: 210 LRCFGENLGIIFQLADDLLDC 230 L + + +G+ FQ+ DD+LD Sbjct: 209 LERYAQAIGLAFQVQDDILDV 229 >gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 312 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/230 (36%), Positives = 130/230 (56%), Gaps = 6/230 (2%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S QE + I + ++ + + + +RL ++RY+LL GGK+IR L L Sbjct: 14 SSEQEFNAYIKNVNAEIERALDASVPMHYPERLSESMRYSLLAGGKRIRPALCLAACELV 73 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A+ A+E IH SLIHDDLPSMDN RRGKPT H Y E AI+AG+ LL+ Sbjct: 74 GGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLS 133 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----I 180 +AFE I + + ++++ + +G +G++GGQ++DI E DE V + I Sbjct: 134 HAFEYIGRETKGVSADKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGADEGTVTIDTLKYI 193 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTGAL+ + +GAI+ AS+ + +L + +N+G+ FQ+ DD+LDC Sbjct: 194 HAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDC 243 >gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC 15579] gi|187773137|gb|EDU36939.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC 15579] Length = 290 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L+ + ++ ++ A+ Y+L GGK+IR L+ +L+ ++ A+ + AAIE Sbjct: 12 ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLLLNTYALYKEDYKKAMPIAAAIE 71 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ + + Sbjct: 72 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGE 131 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAI 198 N + ++ G+ GM+GGQ++DI +D+ I +++ + K KTGAL+ + +GAI Sbjct: 132 NAL-KACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAI 190 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + A+ + E L +G+NLG+ FQ+ DD+LD E D Sbjct: 191 LGSATSTDIELLGEYGDNLGLAFQIKDDILDVEGD 225 >gi|315282228|ref|ZP_07870682.1| geranyltranstransferase [Listeria marthii FSL S4-120] gi|313614130|gb|EFR87820.1| geranyltranstransferase [Listeria marthii FSL S4-120] Length = 293 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/190 (43%), Positives = 112/190 (58%), Gaps = 3/190 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV N + L +R A+E IH YSLIHDDLP+MDN RRGK T H Sbjct: 43 GGKRIRPMLVFATLQALNADPLLGVRTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNH 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + TAI+AG+ LLT AF I++ + L R L+ ++ + G +GM+GGQ D++ Sbjct: 103 KIFGDATAILAGDALLTLAFSILAEDE-NLSFETRLALIKEISFSSGAEGMVGGQQADME 161 Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E T ++ I KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD Sbjct: 162 AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADSEQTKRLRIFAENIGIGFQISDD 221 Query: 227 LLDCEEDLPK 236 +LD D K Sbjct: 222 ILDVIGDETK 231 >gi|126741029|ref|ZP_01756712.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6] gi|126717955|gb|EBA14674.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6] Length = 293 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/205 (43%), Positives = 126/205 (61%), Gaps = 10/205 (4%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L A+RYAL GGK +R FLV E A L V+ AL AIEC+H YSL HDDLP M Sbjct: 33 EDNLHQAMRYALKGGKMLRGFLVLESARLHGVSQKVALDAALAIECLHAYSLAHDDLPCM 92 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRG+PT+H ++DE A++AG+ L +AFE++S+P + N S L+ L + G Sbjct: 93 DDDDLRRGQPTLHRKWDEAMAVLAGDSLQCFAFELLSNP--DMGPNALS-LIRDLAKSAG 149 Query: 156 LQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GM+ GQMLDI E + Q+ ++Q KTG L+ ++ +GA++A A LR Sbjct: 150 KDGMVSGQMLDIAAETAETPLTLEQISLLQARKTGCLIEWSASAGAVLAGADSTP---LR 206 Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236 + LG+ FQ+ADD+LD E D+ K Sbjct: 207 QYATALGLAFQIADDILDVEGDVQK 231 >gi|217964491|ref|YP_002350169.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Listeria monocytogenes HCC23] gi|217333761|gb|ACK39555.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Listeria monocytogenes HCC23] gi|307570945|emb|CAR84124.1| geranyltranstransferase [Listeria monocytogenes L99] Length = 293 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 80/184 (43%), Positives = 111/184 (60%), Gaps = 3/184 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H Sbjct: 43 GGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNH 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + TAI+AG+ LLT AF I++ + L R L+ ++ + G +GM+GGQ+ D++ Sbjct: 103 KVFGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISFSSGAEGMVGGQLADME 161 Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E T ++ I KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD Sbjct: 162 AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDD 221 Query: 227 LLDC 230 +LD Sbjct: 222 ILDV 225 >gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila LSv54] gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila LSv54] Length = 298 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 91/232 (39%), Positives = 133/232 (57%), Gaps = 18/232 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L++ ++ +D +L+ + + + A+RY+L GGK+IR L A Sbjct: 7 LEQKRSLVEEAMDRFMLEESGPFKKH-----IEAMRYSLFAGGKRIRPILCLAAADSICA 61 Query: 68 NHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 T L V A+ECIH YSLIHDDLP+MD+ +RRGK T H+ Y E AI+AG+GLL Sbjct: 62 QERTQENLLPVACALECIHTYSLIHDDLPAMDDDQLRRGKATNHVLYGEAGAILAGDGLL 121 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF--IDETQVF 178 ++AF++I+ + K N+ ++ L + H + G GM+GGQ LDIQ E ID + Sbjct: 122 SWAFDLIAD---RGKGNLTAEKRLDICHMVARAAGSLGMVGGQQLDIQSENKEIDFDTLA 178 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I + KTGAL+ + SGAI A A+ + L +G N+G+ FQ+ DDLLD Sbjct: 179 TIHRSKTGALITCSIMSGAIGAGANAKQLHALEEYGNNIGLAFQIIDDLLDA 230 >gi|313608930|gb|EFR84685.1| geranyltranstransferase [Listeria monocytogenes FSL F2-208] Length = 293 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 80/184 (43%), Positives = 111/184 (60%), Gaps = 3/184 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H Sbjct: 43 GGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNH 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + TAI+AG+ LLT AF I++ + L R L+ ++ + G +GM+GGQ+ D++ Sbjct: 103 KVFGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISFSSGAEGMVGGQLADME 161 Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E T ++ I KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD Sbjct: 162 AESKQVTLEELSSIHARKTGELLIFAITSAAKIAEADPEQTKRLRIFAENIGIGFQISDD 221 Query: 227 LLDC 230 +LD Sbjct: 222 ILDV 225 >gi|254282519|ref|ZP_04957487.1| geranyltranstransferase [gamma proteobacterium NOR51-B] gi|219678722|gb|EED35071.1| geranyltranstransferase [gamma proteobacterium NOR51-B] Length = 279 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN--HLTALRVGAAIECIHCYSLIHDDL 92 + +L +A Y L GK++R+ LV E A++ + V AIE +H YSL+HDDL Sbjct: 13 DPQLAAAAEYVLANPGKQLRAKLVRETAAMLGSADPNCGVETVATAIELLHSYSLVHDDL 72 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN +RRG+PTVH +DE TAI+ G+G AFEII+ + L R +L L+ Sbjct: 73 PAMDNDDLRRGRPTVHRAFDEATAILVGDGFQARAFEIIAR-DSSLSAEQRVELFALLSQ 131 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +G +GM+GGQ LD+ E ++ + ++KTGAL+ A GAI+A A++ +RL Sbjct: 132 AVGFEGMVGGQALDMAAEHQQCGIAELTRLHRLKTGALIQAAVVGGAIVAGANRETLDRL 191 Query: 211 RCFGENLGIIFQLADDLLD---CEEDLPK 236 F NLG+ FQ+ DD+LD C +DL K Sbjct: 192 ATFAMNLGLAFQVIDDVLDVTACSDDLGK 220 >gi|16803403|ref|NP_464888.1| hypothetical protein lmo1363 [Listeria monocytogenes EGD-e] gi|224499942|ref|ZP_03668291.1| hypothetical protein LmonF1_09784 [Listeria monocytogenes Finland 1988] gi|224501694|ref|ZP_03670001.1| hypothetical protein LmonFR_04127 [Listeria monocytogenes FSL R2-561] gi|254827624|ref|ZP_05232311.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165] gi|284801748|ref|YP_003413613.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578] gi|284994890|ref|YP_003416658.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923] gi|16410779|emb|CAC99441.1| lmo1363 [Listeria monocytogenes EGD-e] gi|258600002|gb|EEW13327.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165] gi|284057310|gb|ADB68251.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578] gi|284060357|gb|ADB71296.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923] Length = 293 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 119/200 (59%), Gaps = 12/200 (6%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL ++ Y++ GGK+IR LV VN L ++ A+E IH YSLIHDDLP+MD Sbjct: 31 RLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154 N RRGK T H + + TAI+AG+ LLT AF I++ DN+ + ++L + I Sbjct: 91 NDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAE-----DDNLSFETRIALINQISF 145 Query: 155 --GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G +GM+GGQ+ D++ E T ++ I KTG L+ +A S A +A A + +RL Sbjct: 146 SSGAEGMVGGQLADLEAENKQVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRL 205 Query: 211 RCFGENLGIIFQLADDLLDC 230 R F EN+GI FQ++DD+LD Sbjct: 206 RIFAENIGIGFQISDDILDV 225 >gi|290893528|ref|ZP_06556511.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria monocytogenes FSL J2-071] gi|290556873|gb|EFD90404.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria monocytogenes FSL J2-071] Length = 285 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/184 (43%), Positives = 111/184 (60%), Gaps = 3/184 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H Sbjct: 35 GGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNH 94 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + TAI+AG+ LLT AF I++ + L R L+ ++ + G +GM+GGQ+ D++ Sbjct: 95 KVFGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISFSSGAEGMVGGQLADME 153 Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E T ++ I KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD Sbjct: 154 AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDD 213 Query: 227 LLDC 230 +LD Sbjct: 214 ILDV 217 >gi|269958629|ref|YP_003328416.1| geranyltranstransferase [Anaplasma centrale str. Israel] gi|269848458|gb|ACZ49102.1| geranyltranstransferase [Anaplasma centrale str. Israel] Length = 290 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 86/229 (37%), Positives = 127/229 (55%), Gaps = 4/229 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65 S +++ + ++ L+Q AS + L A+ Y + GK IRSFL + A +F Sbjct: 10 SDIRQKVEDFSCLVRKELVQIASTKAECPSTVLYEALSYTISNPGKCIRSFLASTSARVF 69 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V+ LR+GAAIE +H YSL+HDDLPSMDN RRG+ + H ++ E A++ G+ LLT Sbjct: 70 GVSAERTLRLGAAIEAVHAYSLVHDDLPSMDNSPTRRGRESCHTKFGEAVAVLTGDALLT 129 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMK 184 FE++S+ +R +++ L+ G GM+ GQ LDI+ + V I ++K Sbjct: 130 LTFELLSTMDEGCA--VRCKIIELLSKACGRCGMVAGQALDIEAHSSTSFEGVRRIHELK 187 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T L ACE+GA++ AS E+ L +G LG FQ DDL D ED Sbjct: 188 TARLFSAACEAGAVLGGASTKERAALAEYGSALGCAFQAKDDLNDAGED 236 >gi|254829880|ref|ZP_05234535.1| hypothetical protein Lmon1_00925 [Listeria monocytogenes 10403S] Length = 293 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/200 (41%), Positives = 119/200 (59%), Gaps = 12/200 (6%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL ++ Y++ GGK+IR LV VN L ++ A+E IH YSLIHDDLP+MD Sbjct: 31 RLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154 N RRGK T H + + TAI+AG+ LLT AF I++ DN+ + ++L + I Sbjct: 91 NDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAE-----DDNLSFETRIALINQISF 145 Query: 155 --GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G +GM+GGQ+ D++ E + ++ I KTG L+ +A S A +A A + +RL Sbjct: 146 SSGAEGMVGGQLADMEAENKHVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRL 205 Query: 211 RCFGENLGIIFQLADDLLDC 230 R F EN+GI FQ++DD+LD Sbjct: 206 RIFAENIGIGFQISDDILDV 225 >gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065] Length = 284 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 84/216 (38%), Positives = 133/216 (61%), Gaps = 6/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L+ + ++ ++ A+ Y+L GGK+IR L SL+ ++ A+ + AAIE Sbjct: 6 ELWLKEHLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 65 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ + LK+ Sbjct: 66 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 123 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + ++ G+ GM+GGQ++DI +D+ I +++ + K KTGAL+ + +GA Sbjct: 124 GEKAVKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKSSILAGA 183 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+ A+ + E L +G+NLG+ FQ+ DD+LD E D Sbjct: 184 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 219 >gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum] Length = 297 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 91/222 (40%), Positives = 129/222 (58%), Gaps = 9/222 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 KR+D L+ L + S + RL IRY+LL GGK+IR L + + Sbjct: 12 KRVDKALEALFERELS----REYGRLAEGIRYSLLAGGKRIRPVLALAAIEAVGGDGESL 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L + +E +H YSL+HDDLP+MDN +RRG+PT H+ Y E AI+AG+ LLT+AF ++S Sbjct: 68 LPLTLPLELVHTYSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDALLTHAFTLLS 127 Query: 133 SP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGAL 188 P L + R +++ L+ GL GM+GGQ LDI E + T ++ + + KTGAL Sbjct: 128 DPVYDKVLPASRRMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELENLHRHKTGAL 187 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + + G I+A AS E L +GE +GI FQ+ADDLLD Sbjct: 188 LRASVRIGGILAGASSEWVEALTRYGEAVGIAFQIADDLLDV 229 >gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16] gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16] Length = 293 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/194 (42%), Positives = 118/194 (60%), Gaps = 5/194 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ Y+L+ GGK+IR LV E + + AL A+E IH YSLIHDDLP+MD+ Sbjct: 34 LREAMEYSLMAGGKRIRPVLVLESCRMCGGDPEVALPFACAVEMIHTYSLIHDDLPAMDD 93 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+PT H+ Y E TAI+AG+GLLT AF+ ++ + + + + LSL G Sbjct: 94 DELRRGRPTNHMVYGEATAILAGDGLLTAAFQTLTQAQLTAQQVVDAVACLSLA--AGPD 151 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD+ E + ++ +Q +KTGAL+ A E G I A S ++E +R + + Sbjct: 152 GMVGGQALDMAGEGRSLTRAELEQLQSLKTGALIAAAAELGCIAAGGSPEQRESVRQYAQ 211 Query: 216 NLGIIFQLADDLLD 229 LG FQ+ DD+LD Sbjct: 212 CLGRAFQVQDDILD 225 >gi|300214352|gb|ADJ78768.1| Geranyltranstransferase [Lactobacillus salivarius CECT 5713] Length = 305 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 127/203 (62%), Gaps = 14/203 (6%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N L ++RY++ GGK+IR LV A SL + +V ++E +H YSLIHDDLP Sbjct: 39 NQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLP 98 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MDN +RRGKPT H ++ + A++AG+GLLT +FE +S T + ++ + +L+ L Sbjct: 99 EMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALA 156 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEK 207 G QGM+ GQ D+ + E++ + ++++ KTGAL+ +AC +G I++ AS N+ Sbjct: 157 AGPQGMVSGQT----DDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 212 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 E LR +GEN G+ FQ+ DDLLD Sbjct: 213 ELLRKYGENFGLAFQIYDDLLDV 235 >gi|227890599|ref|ZP_04008404.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741] gi|227867537|gb|EEJ74958.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741] Length = 305 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 127/203 (62%), Gaps = 14/203 (6%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N L ++RY++ GGK+IR LV A SL + +V ++E +H YSLIHDDLP Sbjct: 39 NQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLP 98 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MDN +RRGKPT H ++ + A++AG+GLLT +FE +S T + ++ + +L+ L Sbjct: 99 EMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALA 156 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEK 207 G QGM+ GQ D+ + E++ + ++++ KTGAL+ +AC +G I++ AS N+ Sbjct: 157 AGPQGMVSGQT----DDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 212 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 E LR +GEN G+ FQ+ DDLLD Sbjct: 213 ELLRKYGENFGLAFQIYDDLLDV 235 >gi|332288106|ref|YP_004418958.1| putative geranyltranstransferase [Gallibacterium anatis UMN179] gi|330431002|gb|AEC16061.1| putative geranyltranstransferase [Gallibacterium anatis UMN179] Length = 295 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 87/197 (44%), Positives = 121/197 (61%), Gaps = 9/197 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RY+LL GGK+IR FLV + V+ + AIECIHCYSLIHDDLP+MDN Sbjct: 33 LADAMRYSLLLGGKRIRPFLVYATGRMLGVDLAKLDHIAGAIECIHCYSLIHDDLPAMDN 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RR PT HI +DE TAI+AG+ L +YAFE+++ SP + ++ QL L + G Sbjct: 93 DTLRRNNPTCHIAFDEATAILAGDALQSYAFELLAKSPIADQQKILQFQL---LANASGA 149 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KERLRC 212 +GM GQ LD+ +++ I ++ I K KTGAL+ A G + QNE K++L Sbjct: 150 EGMCLGQSLDLISENKQIGLAELERIHKNKTGALITAAVLLGFYCSSYYQNEQIKQKLIS 209 Query: 213 FGENLGIIFQLADDLLD 229 F +G+ FQ+ DD+LD Sbjct: 210 FSAAIGLAFQVQDDILD 226 >gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553] gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553] Length = 303 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 86/234 (36%), Positives = 133/234 (56%), Gaps = 16/234 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV----TECAS 63 LQ + ++ +LDDL+ A + RL A+RYA+LGG K++R+ +V C Sbjct: 12 LQGRVRHVEDVLDDLM-PPAEVLPV----RLHEAMRYAVLGGGKRVRAAMVYAAGQACPV 66 Query: 64 LFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +V + A R AA+E IH YSL+HDDLP MDN +RRG+PT H+Q+DE TA++AG+ Sbjct: 67 SGSVLAIEASLDRAAAAVELIHAYSLVHDDLPCMDNDTLRRGRPTTHVQFDEATAMLAGD 126 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179 L AF++++S + + Q SL G QGM GGQ +D+ + ++ Sbjct: 127 ALQPLAFDLLAS--MPIAPALIVQATQSLARAAGSQGMAGGQAIDLLSVGHSLSRDELQT 184 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 185 MHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAMGLAFQVVDDILDVTAD 238 >gi|295319241|gb|ADF99618.1| geranyltranstransferase [Clostridium botulinum F str. 230613] Length = 290 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/216 (38%), Positives = 133/216 (61%), Gaps = 6/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L+ + ++ ++ A+ Y+L GGK+IR L SL+ ++ A+ + AAIE Sbjct: 12 ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ + LK+ Sbjct: 72 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + ++ G+ GM+GGQ++DI +D+ I +++ +Q+ K GAL+ + +GA Sbjct: 130 GEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMQQKKAGALIKASILAGA 189 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+ A+ + E L +G+NLG+ FQ+ DD+LD E D Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225 >gi|90961512|ref|YP_535428.1| geranyltranstransferase [Lactobacillus salivarius UCC118] gi|90820706|gb|ABD99345.1| Geranyltranstransferase [Lactobacillus salivarius UCC118] Length = 297 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 127/203 (62%), Gaps = 14/203 (6%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N L ++RY++ GGK+IR LV A SL + +V ++E +H YSLIHDDLP Sbjct: 31 NQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLP 90 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MDN +RRGKPT H ++ + A++AG+GLLT +FE +S T + ++ + +L+ L Sbjct: 91 EMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALA 148 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEK 207 G QGM+ GQ D+ + E++ + ++++ KTGAL+ +AC +G I++ AS N+ Sbjct: 149 AGPQGMVSGQT----DDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 204 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 E LR +GEN G+ FQ+ DDLLD Sbjct: 205 ELLRKYGENFGLAFQIYDDLLDV 227 >gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 299 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/229 (40%), Positives = 128/229 (55%), Gaps = 19/229 (8%) Query: 24 LLQTASHMQTQHNDRL--------------LSAIRY-ALLGGKKIRSFLVTECASLFNVN 68 LLQ H Q ++N +L L A++Y ALLGGK++R FL ++ VN Sbjct: 6 LLQLLQHYQERNNQQLTHWLDAQPFADQTLLKAMKYGALLGGKRVRPFLTYVTGNMLGVN 65 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AAIECIH YSLIHDDLP+MD+ +RRG+PT HI +DE TA++AG+ L T AF Sbjct: 66 EENLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIAFDEATAVLAGDALQTLAF 125 Query: 129 EIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 EI++ + ++ R +++ L G GM GQ LD+ E + TQ+ I K KT Sbjct: 126 EILAEGTLSIDGESQRIKMIKELAQASGAAGMCMGQALDLDGEGKHLGLTQLEQIHKHKT 185 Query: 186 GALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ A GA+ A E +L + E +G+ FQ+ DD+LD D Sbjct: 186 GALIRCAVRLGALAAGEKGLEILPQLNTYAEAIGLAFQVQDDILDVISD 234 >gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545] gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545] Length = 343 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 123/204 (60%), Gaps = 9/204 (4%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + +RL ++RY+LL GGK+IR L L A+ A+E IH SLIHDDLP Sbjct: 72 YPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMEVAMPTACALEMIHTMSLIHDDLP 131 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLT 151 SMDN RRGKPT H Y E AI+AG+ LL++AFE I +PK+ + ++++ + Sbjct: 132 SMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETPKSVPAERTL-RVLVDVG 190 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNE 206 +G +G++GGQ++DI E D +V + I KTGAL+ + SGAI+A A + + Sbjct: 191 KCVGSEGLVGGQVVDIMSEGADADEVTLETLKYIHAHKTGALLEVSVTSGAILAGAKEED 250 Query: 207 KERLRCFGENLGIIFQLADDLLDC 230 ERL + + +G+ FQ+ DD+LDC Sbjct: 251 VERLGKYAQLIGLAFQVVDDILDC 274 >gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured Desulfobacterium sp.] Length = 316 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/239 (38%), Positives = 138/239 (57%), Gaps = 21/239 (8%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63 L S E +K I L +++ ++ S Q L A+ Y+L+ GK+IR L A Sbjct: 24 LESYFAEKTKTIKNELINIINKSNSFGQ------LSKAMEYSLISEGKRIRPILCIAAAE 77 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AIE IH YSLIHDDLP++DN +RRGKPT H ++E TAI+AG+ L Sbjct: 78 SVGGKQSDVLPAACAIEIIHTYSLIHDDLPAIDNDLLRRGKPTCHAAFNEATAILAGDAL 137 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEFIDETQVFM 179 LT AF+++S + +L +N + L + + I G GM+ GQM DI E TQ+ + Sbjct: 138 LTLAFQVLS--EFELHNNTNALKWLKIINLISTAAGYMGMIEGQMRDIASE---NTQILL 192 Query: 180 -----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + +KTGAL+ + ESGAI+A+AS ++ ++L+ + + +G+ FQ+ADDLL+ D Sbjct: 193 NKLEELHILKTGALIVASVESGAILANASLDQIKQLKIYAKKIGLAFQIADDLLNAMGD 251 >gi|47095946|ref|ZP_00233549.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854] gi|254898472|ref|ZP_05258396.1| hypothetical protein LmonJ_01615 [Listeria monocytogenes J0161] gi|254912037|ref|ZP_05262049.1| geranyltranstransferase [Listeria monocytogenes J2818] gi|254936364|ref|ZP_05268061.1| geranyltranstransferase [Listeria monocytogenes F6900] gi|47015692|gb|EAL06622.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854] gi|258608955|gb|EEW21563.1| geranyltranstransferase [Listeria monocytogenes F6900] gi|293590003|gb|EFF98337.1| geranyltranstransferase [Listeria monocytogenes J2818] Length = 293 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 121/206 (58%), Gaps = 12/206 (5%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL ++ Y++ GGK+IR LV VN L ++ A+E IH YSLIHDDLP+MD Sbjct: 31 RLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154 N RRGK T H + + TAI+AG+ LLT AF I++ DN+ + ++L + I Sbjct: 91 NDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAE-----DDNLSFETRIALINQISF 145 Query: 155 --GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G +GM+GGQ+ D++ E + ++ I KTG L+ +A S A +A A + +RL Sbjct: 146 SSGAEGMVGGQLADMEAENKHVTLEELSSIHARKTGELLIYAVTSAAKIAEADLEQTKRL 205 Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236 R F EN+GI FQ++DD+LD D K Sbjct: 206 RIFAENIGIGFQISDDILDVIGDETK 231 >gi|313638049|gb|EFS03327.1| geranyltranstransferase [Listeria seeligeri FSL S4-171] Length = 293 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/190 (42%), Positives = 113/190 (59%), Gaps = 3/190 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV + + ++V A+E IH YSLIHDDLP+MDN RRGK T H Sbjct: 43 GGKRIRPMLVFATLQALQADPMRGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNH 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y + TAI+AG+ LLT AF I++ + L R L+ ++ + G +GM+GGQ D++ Sbjct: 103 KVYGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISFSSGAEGMVGGQQADME 161 Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E T ++ I KTG L+ FA S A +A AS + +RLR F EN+G+ FQ++DD Sbjct: 162 AENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQISDD 221 Query: 227 LLDCEEDLPK 236 +LD D K Sbjct: 222 ILDVIGDETK 231 >gi|312899122|ref|ZP_07758500.1| putative geranyltranstransferase [Megasphaera micronuciformis F0359] gi|310619789|gb|EFQ03371.1| putative geranyltranstransferase [Megasphaera micronuciformis F0359] Length = 293 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 87/227 (38%), Positives = 124/227 (54%), Gaps = 9/227 (3%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65 + L+ KRIDT L +LL QT+ T L A+ Y+L GGK+IR L Sbjct: 5 TSLESRKKRIDTRLAELL-QTS----TPEFSGLYEAMNYSLNAGGKRIRPVLFLAVLEAA 59 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + L + A+EC+H YSLIHDDLP+MDN RRGKPT H Y + TA++AG+GLLT Sbjct: 60 GTDPDAFLDLACALECVHSYSLIHDDLPAMDNDDFRRGKPTNHKVYGDGTAVLAGDGLLT 119 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKM 183 YAFE++++ I + + H G GM+GGQ D+Q E T+ M + + Sbjct: 120 YAFELMAAQSAAPAHKILQAIRI-FAHAAGPAGMVGGQYFDLQSEGGVPTRAAMELMHRS 178 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG + + A++A + L +G+ LG+ FQ+ DD+LD Sbjct: 179 KTGVIFTAIVQMAALLAGVRNETMKALTTYGDQLGLAFQITDDILDV 225 >gi|301300958|ref|ZP_07207123.1| putative geranyltranstransferase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851425|gb|EFK79144.1| putative geranyltranstransferase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 277 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 127/203 (62%), Gaps = 14/203 (6%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N L ++RY++ GGK+IR LV A SL + +V ++E +H YSLIHDDLP Sbjct: 11 NQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLP 70 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MDN +RRGKPT H ++ + A++AG+GLLT +FE +S T + ++ + +L+ L Sbjct: 71 EMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALA 128 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEK 207 G QGM+ GQ D+ + E++ + ++++ KTGAL+ +AC +G I++ AS N+ Sbjct: 129 AGPQGMVSGQT----DDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 184 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 E LR +GEN G+ FQ+ DDLLD Sbjct: 185 ELLRKYGENFGLAFQIYDDLLDV 207 >gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822] gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822] Length = 307 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 85/208 (40%), Positives = 124/208 (59%), Gaps = 9/208 (4%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +++ A+RY+LL GGK++R L L A+ A+E IH SLIHDDLP+M Sbjct: 42 EKIYEAMRYSLLAGGKRLRPILCLATCELMGGTIEMAMPTACALEMIHTMSLIHDDLPAM 101 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN RRGK T H Y E AI+AG+GLL+YAFE +++ + N Q++ L +G Sbjct: 102 DNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFEFVATQTRNVPPNQVLQVIARLGRTVG 161 Query: 156 LQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G++GGQ+LD++ E ET F I KTGAL+ + SGAI+A A+ ++ RL Sbjct: 162 AAGLVGGQVLDLESEGKLDITAETLTF-IHTHKTGALLETSVLSGAILAGATSEDQRRLS 220 Query: 212 CFGENLGIIFQLADDLLD---CEEDLPK 236 + +N+G+ FQ+ DD+LD +E+L K Sbjct: 221 RYAQNIGLAFQIIDDILDITSTQEELGK 248 >gi|313891715|ref|ZP_07825320.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E] gi|313119709|gb|EFR42896.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E] Length = 284 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 5/198 (2%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L ++ Y+LL GK+IR L +F V++L L + A++EC+H YSLIHDDLP MDN Sbjct: 31 LFDSMNYSLLSNGKRIRGCLFLFILEMFKVDYLQYLDIAASVECVHTYSLIHDDLPCMDN 90 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG T H +Y E A+ AG+ LLT+AF++IS K KD R +L+ L+ G + Sbjct: 91 DDYRRGILTNHKKYGEGVALQAGDALLTFAFQLISQAKFSAKD--RCKLIEILSIAAGAE 148 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+ GQ+ DIQ E I+ ++ ++ K KTG ++ + + H S ++ E+LR F + Sbjct: 149 GMVAGQVHDIQIENRSIELDELKLLDKFKTGRMIKAPVDMAIQLTHMSISDAEQLRKFAK 208 Query: 216 NLGIIFQLADDLLDCEED 233 +LG++FQ+ DD+LD +ED Sbjct: 209 HLGLLFQITDDILDYKED 226 >gi|315639632|ref|ZP_07894772.1| geranyltranstransferase [Enterococcus italicus DSM 15952] gi|315484593|gb|EFU75049.1| geranyltranstransferase [Enterococcus italicus DSM 15952] Length = 289 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 85/213 (39%), Positives = 128/213 (60%), Gaps = 7/213 (3%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAI 79 ++ + TA QT + ++L ++RY++ GGK+IR L+ +L+ N A+ +V AA+ Sbjct: 12 EMTMLTAISEQT-NEEQLAESMRYSVEAGGKRIRPLLLASTYALYQKNVSQAVCQVAAAV 70 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF+++ + +L Sbjct: 71 ELVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTLAFQVLG--QAELA 128 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGA 197 D+ + + L G GM+ GQ DI+ E + Q+ I KTG L+ F+ +G Sbjct: 129 DDKKVACLTLLAQTAGTLGMVAGQAADIEAEGKQLSLEQLQGIHARKTGELIRFSVIAGG 188 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I+ AS E+ +L F LG+ FQ+ DDLLD Sbjct: 189 IIGGASAKEQAQLDSFARKLGLAFQIKDDLLDV 221 >gi|240948732|ref|ZP_04753104.1| geranyltranstransferase [Actinobacillus minor NM305] gi|240296948|gb|EER47526.1| geranyltranstransferase [Actinobacillus minor NM305] Length = 299 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 33 TQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 + H+ L+ A+ YA LLGGK++R FL+ + V+ AA+E IH YSL+HDD Sbjct: 30 SAHHSPLIDAMAYAVLLGGKRVRPFLIYATGRMLGVSLKALDHSAAAMESIHAYSLVHDD 89 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ +RRGKPT HI +DE TAI+AG+ L T+AFE+I+ L D + + + SL Sbjct: 90 LPAMDDDKLRRGKPTCHIAFDEATAILAGDSLQTFAFELIAKDPF-LTDLQKIKQIQSLA 148 Query: 152 HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G +GM GQ LD+ +++ I +++ +I + KTGAL+ + G ++ +Q+EK + Sbjct: 149 KAAGAKGMCLGQSLDLISENKAISLSELELIHRNKTGALIVASVLMGFNLSDYAQDEKIK 208 Query: 210 --LRCFGENLGIIFQLADDLLDCEEDLPK 236 L C+ + +G+ FQ+ DD+LD D K Sbjct: 209 NALECYAKAIGLAFQVQDDILDVIGDTDK 237 >gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666] gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666] Length = 306 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 81/225 (36%), Positives = 122/225 (54%), Gaps = 3/225 (1%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 ++++++TI L A L A+RYA+L GGK++R LV N N Sbjct: 16 SAQQLETIEQALSRWVACPTDAPAPAGLGDAMRYAVLDGGKRLRPLLVMAACEAVNGNAE 75 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ALR A+E IH YSL+HDD+P MDN +RRGKPTVH+++ E A++AG+ L AFE Sbjct: 76 AALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALLAGDALQALAFEF 135 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGAL 188 ++ + +++L L G QGM GGQ +D+ + T Q+ + ++KTGAL Sbjct: 136 LTPDDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGLPLTSGQLHEMHRLKTGAL 195 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + G A + LR +G +G+ FQ+ DD+LD D Sbjct: 196 LQASVMMGTACGAAPPAAQHALREYGAAVGLAFQVVDDILDVTAD 240 >gi|163734437|ref|ZP_02141877.1| geranyltranstransferase [Roseobacter litoralis Och 149] gi|161392445|gb|EDQ16774.1| geranyltranstransferase [Roseobacter litoralis Och 149] Length = 289 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 88/224 (39%), Positives = 133/224 (59%), Gaps = 20/224 (8%) Query: 25 LQTASHMQTQHNDRLLS---------AIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75 L+ A H D++L+ A+ +A GGK++R FLV E A L ++ A+ Sbjct: 6 LEAAGAAVQAHFDKVLAEFEPLPIVEAMAHATSGGKRLRGFLVLETARLHDIAAGEAIWS 65 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AIE +H YSL+HDDLP MD+ +RRG+PTVH ++D+ TA++AG+ L T AFE+++ P Sbjct: 66 ATAIEALHAYSLVHDDLPCMDDDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPG 125 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDETQVFMIQKMKTGALM 189 +R+ L LSL G QGM+ GQ LDI E +DE + +Q+ KTGAL+ Sbjct: 126 ASPSAEVRADLALSLARASGAQGMVLGQALDIAAETAHTPLSLDE--ITRLQQGKTGALI 183 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ ++GA +A Q + L+ + + LG+ FQ+ADD+LD D Sbjct: 184 GWSAQAGARLA---QADTAALKRYAQALGLAFQIADDILDVTGD 224 >gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1] gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1] Length = 297 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 88/233 (37%), Positives = 133/233 (57%), Gaps = 22/233 (9%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 LQ+ +R++ L + + A+ + + A+ Y+L GGK+IR L+ F Sbjct: 10 LQQQKQRLENALPHYITRMAA------PETIKRAMSYSLEAGGKRIRPLLLFATLHSFGK 63 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+GLLTYA Sbjct: 64 EPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYA 123 Query: 128 FEIIS-------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 F++I+ SP T+++ L+ L G +GM+ GQ+ DI+ E + Q+ Sbjct: 124 FQVIAEANDARISPMTKIR------LIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLE 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I + KTG ++ ++ +GA++A A+ + +L F +LG+ FQ+ DD+LD E Sbjct: 178 YIHRHKTGKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIE 230 >gi|304440276|ref|ZP_07400166.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371325|gb|EFM24941.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 289 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 85/208 (40%), Positives = 123/208 (59%), Gaps = 12/208 (5%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLP 93 ++ +++Y+L GGK++R L S+FN N + A+E IH YSLIHDDLP Sbjct: 30 KIYESMKYSLSTGGKRVRPILALVSYSIFNDDSKNFSEIIPFAVALEYIHTYSLIHDDLP 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN IRRGKPT H Y+E AI+AG+GLL A E+++ + D I+ + + Sbjct: 90 AMDNDDIRRGKPTNHKVYNEAIAILAGDGLLNLAAEVVAKELEGITDPIKLKRAIKSFRY 149 Query: 154 I----GLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 I G+QGM+GGQ +DI D +DE +V + K+KTGAL+ GAIM A+ E Sbjct: 150 IFSSSGIQGMVGGQTIDI-DLSVDEMSLEEVETMYKLKTGALIKAPLAVGAIMGGATPEE 208 Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDL 234 + + E LG+ +Q+ DD+LD E+DL Sbjct: 209 LISIEGYAEQLGLQYQIKDDILDYEDDL 236 >gi|300870060|ref|YP_003784931.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli 95/1000] gi|300687759|gb|ADK30430.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli 95/1000] Length = 295 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 80/223 (35%), Positives = 133/223 (59%), Gaps = 9/223 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K ID+ ++++ +S + ++N L ++Y L GGK++R L LFN ++ A Sbjct: 12 KDIDSEINNIF--KSSSISLENN--FLDMLKYPLDAGGKRLRPILTCLACELFNGDYKKA 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + ++E IH YSL+HDDLP+MDN +RRGKPT H++Y E AI+ G+GLLT++FEI+S Sbjct: 68 IIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTHSFEILS 127 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMC 190 + + D +L+ +++ G+ GM+ GQ +D+ ++ ID + ++ KTGA++ Sbjct: 128 N--ANVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKILHSKKTGAMIR 185 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A GAI + E + +GE +G+ FQ+ DD+LD D Sbjct: 186 GAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISD 228 >gi|168184569|ref|ZP_02619233.1| geranyltranstransferase [Clostridium botulinum Bf] gi|182672379|gb|EDT84340.1| geranyltranstransferase [Clostridium botulinum Bf] Length = 290 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 84/216 (38%), Positives = 132/216 (61%), Gaps = 6/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L+ + ++ ++ A+ Y+L GGK+IR L SL+ ++ A+ + AAIE Sbjct: 12 ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ + LK+ Sbjct: 72 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + ++ G+ GM+GGQ++DI +D+ I ++ + K KTGAL+ + +GA Sbjct: 130 GEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKKTGALIKASILAGA 189 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+ A+ + E L +G+NLG+ FQ+ DD+LD E D Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225 >gi|295399115|ref|ZP_06809097.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|294978581|gb|EFG54177.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93] Length = 297 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 88/233 (37%), Positives = 133/233 (57%), Gaps = 22/233 (9%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 LQ+ +R++ L + + A+ + + A+ Y+L GGK+IR L+ F Sbjct: 10 LQQQKQRLENALPHYITRMAA------PETIKRAMSYSLEAGGKRIRPLLLFATLHSFGK 63 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+GLLTYA Sbjct: 64 EPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYA 123 Query: 128 FEIIS-------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 F++I+ SP T+++ L+ L G +GM+ GQ+ DI+ E + Q+ Sbjct: 124 FQVIAEADDARISPMTKIR------LIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLE 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I + KTG ++ ++ +GA++A A+ + +L F +LG+ FQ+ DD+LD E Sbjct: 178 YIHRHKTGKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIE 230 >gi|237795298|ref|YP_002862850.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str. 657] gi|229262575|gb|ACQ53608.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str. 657] Length = 290 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 84/216 (38%), Positives = 132/216 (61%), Gaps = 6/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L+ + ++ ++ A+ Y+L GGK+IR L SL+ ++ A+ + AAIE Sbjct: 12 ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ + LK+ Sbjct: 72 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + ++ G+ GM+GGQ++DI +D+ I ++ + K KTGAL+ + +GA Sbjct: 130 GEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKKTGALIKASILAGA 189 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+ A+ + E L +G+NLG+ FQ+ DD+LD E D Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225 >gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185] gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185] gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185] gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185] Length = 295 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 88/231 (38%), Positives = 129/231 (55%), Gaps = 16/231 (6%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69 E KR D + + LL + +++ L A+ Y+L+ GGK++R L+ A + Sbjct: 8 EWKKRADLVEEGLLRELKK--VPAYDETLEKAMEYSLMAGGKRLRPVLLMAAADAVGKDG 65 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 L G AIE IH YSLIHDDLP+MDN RRGKPT H + + A++AG+ LLT AFE Sbjct: 66 AAFLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLAGDALLTLAFE 125 Query: 130 II-----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182 ++ ++P+T + ++ ++ G GM+GGQ+LD++ E +D + I Sbjct: 126 VMLRQEGAAPETLV------TVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAALRKIHM 179 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL C A SGAI+A A + E L + E G+ FQ+ DD+LD D Sbjct: 180 GKTGALFCAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDILDVTGD 230 >gi|227544389|ref|ZP_03974438.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A] gi|300909750|ref|ZP_07127211.1| geranyltranstransferase [Lactobacillus reuteri SD2112] gi|227185652|gb|EEI65723.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A] gi|300893615|gb|EFK86974.1| geranyltranstransferase [Lactobacillus reuteri SD2112] Length = 290 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 118/196 (60%), Gaps = 6/196 (3%) Query: 39 LLSAIRYALL-GGKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L S++ Y+L+ GGK++R L +T L + LR +A+E +H YSLIHDDLP+MD Sbjct: 29 LESSMSYSLMAGGKRLRPALTLTTIEMLGGTLNDDLLRAASALELLHTYSLIHDDLPAMD 88 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H ++ A +AG+GLLT AF+ ++ L N+RSQL L L G Sbjct: 89 NDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVAD--NHLPANVRSQLTLELAKAAGP 146 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+ GQ DI+ E ++ Q+ + + KTG L+ +A +G IM S K+ L FG Sbjct: 147 SGMVAGQARDIEGEHQHLNLNQLKYLHRQKTGELIRYAVLAGGIMMDQSAEIKQELAAFG 206 Query: 215 ENLGIIFQLADDLLDC 230 EN G+ FQ+ DDL+D Sbjct: 207 ENYGLAFQIYDDLMDV 222 >gi|283834262|ref|ZP_06354003.1| geranyltranstransferase [Citrobacter youngae ATCC 29220] gi|291069784|gb|EFE07893.1| geranyltranstransferase [Citrobacter youngae ATCC 29220] Length = 299 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 85/208 (40%), Positives = 123/208 (59%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSL+HDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGQMFGVSLSTLDAPAAAVECIHAYSLMHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MDN +RRG PT H+++ E AI+AG+ L T AF IIS +P ++ D R ++ L Sbjct: 88 AMDNDDLRRGLPTCHVKFGEANAILAGDALQTLAFSIISDAPMPEVADRDRIAMLSELAQ 147 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD++ E ++ + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLEAEGHQVELDALERIHRHKTGALIRAAVRLGAL----SAGDKGRE 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 CLAILDKYAESIGLAFQVQDDILDVVGD 231 >gi|314936356|ref|ZP_07843703.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80] gi|313654975|gb|EFS18720.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80] Length = 293 Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 88/204 (43%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N +L +++Y+L GGK+IR LV + N N+ L+ A+E IH YSLIHDDLP+ Sbjct: 27 NTKLEESMQYSLDAGGKRIRPVLVLLTLEVLNENYKKGLQTALALEMIHTYSLIHDDLPA 86 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGK T H Y E AI+AG+ LLT +FE+I++ K L + +++ L H+ Sbjct: 87 MDNDDFRRGKLTNHKVYGEWKAILAGDALLTKSFELIANDKN-LDAETKVKVISRLAHDS 145 Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+GGQ LD+ E I+ + I K KTGAL+ F+ S A +A+ ++ L C Sbjct: 146 GNLGMVGGQTLDMDSENTPIELHTLEQIHKAKTGALLKFSILSAADIANVNKEILNTLDC 205 Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236 F E+LG++FQ+ DDLLD D K Sbjct: 206 FSEHLGLMFQIKDDLLDVYGDEKK 229 >gi|228476147|ref|ZP_04060855.1| geranyltranstransferase [Staphylococcus hominis SK119] gi|228269970|gb|EEK11450.1| geranyltranstransferase [Staphylococcus hominis SK119] Length = 296 Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 88/204 (43%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N +L +++Y+L GGK+IR LV + N N+ L+ A+E IH YSLIHDDLP+ Sbjct: 30 NTKLEESMQYSLDAGGKRIRPVLVLLTLEVLNENYKKGLQTALALEMIHTYSLIHDDLPA 89 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGK T H Y E AI+AG+ LLT +FE+I++ K L + +++ L H+ Sbjct: 90 MDNDDFRRGKLTNHKVYGEWKAILAGDALLTKSFELIANDKN-LDAETKVKVISRLAHDS 148 Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+GGQ LD+ E I+ + I K KTGAL+ F+ S A +A+ ++ L C Sbjct: 149 GNLGMVGGQTLDMDSENTPIELHTLEQIHKAKTGALLKFSILSAADIANVNKEILNTLDC 208 Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236 F E+LG++FQ+ DDLLD D K Sbjct: 209 FSEHLGLMFQIKDDLLDVYGDEKK 232 >gi|325578412|ref|ZP_08148547.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392] gi|325160148|gb|EGC72277.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392] Length = 297 Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 123/204 (60%), Gaps = 6/204 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 +N L A++Y LL GGK++R FLV + AAIE IH YSLIHDDLP Sbjct: 30 YNAHLRDAMKYGLLLGGKRVRPFLVYATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLP 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN +RRG+PT HI +DE TAI+AG+ L +AFEI++ + L + QL+ L Sbjct: 90 AMDNDELRRGQPTCHIAFDEATAILAGDALQAFAFEILTEAPS-LSAEQKLQLVKVLAQA 148 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KER 209 G+QGM GQ LD+ E ++ ++ +I + KTGAL+ A + G I + +N+ +++ Sbjct: 149 SGVQGMCLGQSLDLISEHKQVNLDELELIHRNKTGALLTAALKLGFICSPHFENKELEQQ 208 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + + +G+ FQ+ DD+LD E D Sbjct: 209 LERYSQTIGLAFQVQDDILDIEGD 232 >gi|33152401|ref|NP_873754.1| farnesyl-diphosphate synthase [Haemophilus ducreyi 35000HP] gi|33148624|gb|AAP96143.1| geranyltranstransferase [Haemophilus ducreyi 35000HP] Length = 308 Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 90/235 (38%), Positives = 134/235 (57%), Gaps = 11/235 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M L + L +RI+ L + L Q+ + L A+ YA LLGGK+IR FL+ Sbjct: 12 MTYSLTTDLNAIQQRINHFLSNQLPQSPTEQPP-----LNQAMAYAVLLGGKRIRPFLMY 66 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + V T AAIE IH YSL+HDDLP+MDN +RRGKPT HI +DE TAI+A Sbjct: 67 TTGKMLGVPLTTLDHSAAAIEAIHAYSLVHDDLPAMDNDQLRRGKPTCHIAFDEATAILA 126 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177 GN L AFE+I++ L D + Q + +L+ G +GM GQ LD+ +++ ++ T++ Sbjct: 127 GNALQALAFELIAN-APHLTDWQKVQQIRTLSTAAGAKGMCLGQNLDLLAENKSLNLTEL 185 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDC 230 I + KTGAL+ + ++ +QN K+ L + + +G+ FQ+ DD+LD Sbjct: 186 EQIHRHKTGALIVASVLMAVNLSDHAQNNAIKQPLERYAQAIGLAFQVQDDILDV 240 >gi|169837010|ref|ZP_02870198.1| Dimethylallyltransferase [candidate division TM7 single-cell isolate TM7a] Length = 269 Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 85/238 (35%), Positives = 140/238 (58%), Gaps = 10/238 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 LQ+ K +++D L++ + + ++ ++L A+ YA++ GGK+IR L+ LF+ Sbjct: 6 LQKYLKEKKKVVEDNLMELLGNYRDKYPEKLAKAMEYAVMNGGKRIRPILMYMICDLFDE 65 Query: 68 NHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N + ++ A+E IHCYSL+HDDLP+MDN RRGK TVH +Y+E ++ G+ LL Sbjct: 66 NKKSYDKIKEIAVALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGVLVGDVLL 125 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182 T AF +++S K L+D + Q++ L+ G GM+GGQ +DI+ E ++ + I Sbjct: 126 TEAFGVVASAKN-LEDKSKVQIISKLSEYAGFFGMVGGQFVDIESEHKKVEIDTLKYIHA 184 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPKK 237 KTG L+ A E I + + +++ + + LGI FQ+ DD+LD E E++ KK Sbjct: 185 HKTGKLLTAAIELPMIALNIENEKYQKMVEYSKLLGIAFQIKDDILDIEGNFEEIGKK 242 >gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424] gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424] Length = 307 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/216 (39%), Positives = 126/216 (58%), Gaps = 9/216 (4%) Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 S + +++ A+RY+LL GGK++R L L A+ A+E IH SL Sbjct: 34 SSLPITKPEKIYEAMRYSLLAGGKRLRPILCLATCDLMGGTVEMAMPTACALEMIHTMSL 93 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLP+MDN RRGK T H Y E AI+AG+GLL+YAFE +++ + +++ Sbjct: 94 IHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFEYVATQTRNVPPEQILEVI 153 Query: 148 LSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L +G G++GGQ+LD++ E ET F I KTGAL+ + SGAI+A A+ Sbjct: 154 ARLGRTVGAAGLVGGQVLDLESEGKSDITPETLTF-IHTHKTGALLETSVVSGAILAGAT 212 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 + E E+L + +N+G+ FQ+ DD+LD +E+L K Sbjct: 213 REEVEKLSRYAQNIGLAFQIVDDILDITATQEELGK 248 >gi|254513023|ref|ZP_05125089.1| farnesyl diphosphate synthase [Rhodobacteraceae bacterium KLH11] gi|221533022|gb|EEE36017.1| farnesyl diphosphate synthase [Rhodobacteraceae bacterium KLH11] Length = 288 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/199 (42%), Positives = 124/199 (62%), Gaps = 8/199 (4%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+ YA GGK++R FLV E A L ++ A+ IE +H YSL+HDDLP MD+ +R Sbjct: 32 AMAYATAGGKRLRGFLVLESARLHEIDLARAIWPATGIEALHAYSLVHDDLPCMDDDDLR 91 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG+PTVH+++DE TA++AG+ L T AFE+ + P+ +R++L L+L G QGM+ Sbjct: 92 RGRPTVHVKWDEGTAVLAGDALQTLAFELCTRPEVG-DAGVRAELALTLAQASGAQGMVL 150 Query: 162 GQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ LDI E + ++ +Q KTGAL+ ++ +GA MA Q + + LR + L Sbjct: 151 GQALDIAAETAATPLTLPEITRLQSGKTGALIEWSACAGARMA---QADPDPLRQYARAL 207 Query: 218 GIIFQLADDLLDCEEDLPK 236 G+ FQ+ADD+LD E D K Sbjct: 208 GLAFQIADDILDVEGDADK 226 >gi|219870895|ref|YP_002475270.1| geranyltranstransferase [Haemophilus parasuis SH0165] gi|219691099|gb|ACL32322.1| geranyltranstransferase [Haemophilus parasuis SH0165] Length = 297 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 89/237 (37%), Positives = 137/237 (57%), Gaps = 15/237 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN L ++L + +RI+ L + L Q ++ N L+ A+ YA LLGGK++R FL+ Sbjct: 1 MNYDLFAELSQYQQRINHFLSEQLSQYPAY-----NTPLIDAMSYAVLLGGKRVRPFLIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + V A+E IH YSL+HDDLP+MDN +RRGKPT HI +DE TAI+A Sbjct: 56 ATGKMLGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175 G+ L ++AFE+++ + + +Q M L + G +GM GQ LD+Q E +DE Sbjct: 116 GDALQSFAFELLAFDPSLTAEQKVAQ-MQWLAKSAGAKGMCLGQSLDLQSEHKAIALDEL 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDC 230 + I + KTGAL+ + G ++ +Q+ K++L + E +G+ FQ+ DD+LD Sbjct: 175 E--RIHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAEAIGLAFQVQDDILDV 229 >gi|261379616|ref|ZP_05984189.1| geranyltranstransferase [Neisseria subflava NJ9703] gi|284798098|gb|EFC53445.1| geranyltranstransferase [Neisseria subflava NJ9703] Length = 298 Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 7/209 (3%) Query: 29 SHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 S Q H L A+RY LGG K++R LV + L N + AAIE +H YSL Sbjct: 28 SESQVPHT--LHEAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIEMVHVYSL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+P+MDN +RRGKPT H+QYDE TA++ G+ L T AF+++S P T L + ++ Sbjct: 86 VHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRP-TGLPAERQLAML 144 Query: 148 LSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQ 204 +L G GM GGQ +D+ + + +++ ++ + +KTGAL+ A GA+ + Sbjct: 145 STLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKTGALIRAAVALGALSCPDLTP 204 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + L + LG+ FQ+ DD+LDCE D Sbjct: 205 AQIQTLDRYAAKLGLAFQVIDDVLDCEAD 233 >gi|319941604|ref|ZP_08015928.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B] gi|319804834|gb|EFW01688.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B] Length = 296 Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL+ A+RY+LLGG K+IR L ++ R A+E IH YSL+HDD+PSMD Sbjct: 25 RLVGAMRYSLLGGGKRIRPLLCYAAGAVSGAPEEVLDRAALALEMIHSYSLVHDDMPSMD 84 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+ T H++Y E A++AG+ L T AF ++SSP + +L+ +L G+ Sbjct: 85 NDTLRRGRATTHVRYGEAMAMLAGDALQTEAFTVLSSP--SVPPEAAQRLVQTLARAAGV 142 Query: 157 QGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGA---IMAHASQNEKERLR 211 GM GGQ LD++ + ++ +Q MKTGA++ A GA I K L Sbjct: 143 WGMCGGQALDLEMVGQKPGAAELSRMQAMKTGAMIMAAVLMGAQSGIWTALGDQAKAGLA 202 Query: 212 CFGENLGIIFQLADDLLDCEED 233 + + LG+ FQ+ DD+LDC +D Sbjct: 203 AYADALGVAFQVVDDILDCTQD 224 >gi|310829047|ref|YP_003961404.1| Polyprenyl synthetase [Eubacterium limosum KIST612] gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612] Length = 297 Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 5/202 (2%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D ++SA++Y+L GGK++R L+ E + + AIE IH YSLIHDDLP+M Sbjct: 31 DIIVSAMKYSLFAGGKRLRPILMKETCRCLGGDSADVKPLACAIEMIHTYSLIHDDLPAM 90 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSLTHN 153 DN +RRGKPT H Y E AI+AG+ LL YA E I P K ++ + L H+ Sbjct: 91 DNDDLRRGKPTNHKVYGENMAILAGDALLNYAMETAIAGIPVDPSKTFHYTRALSYLAHS 150 Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G+ GM+GGQ DI ++E I+E +++ I KTGAL+ A G +A + E++ L Sbjct: 151 SGVNGMIGGQTGDILSENEAINEEKMYYIHAHKTGALLKAAVLCGGFVAKVTGEERDALE 210 Query: 212 CFGENLGIIFQLADDLLDCEED 233 + E +G+ FQ+ DD+LD D Sbjct: 211 TYSEKIGLAFQIVDDILDVTGD 232 >gi|328956986|ref|YP_004374372.1| geranyltranstransferase [Carnobacterium sp. 17-4] gi|328673310|gb|AEB29356.1| geranyltranstransferase [Carnobacterium sp. 17-4] Length = 299 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/196 (42%), Positives = 121/196 (61%), Gaps = 13/196 (6%) Query: 42 AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+L GGK+IR L+ + V AA+E IH YSLIHDDLP+MDN + Sbjct: 35 AMFYSLEAGGKRIRPLLLLATIQSLGGDIRKGYAVSAALEFIHTYSLIHDDLPAMDNDDL 94 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGL 156 RRGKPT HI Y E TAI+AG+ LLT AFEII +SP+ ++K L+L+L + G Sbjct: 95 RRGKPTSHIVYGEDTAILAGDALLTQAFEIIAVSDASPEKKVK------LILALAKSAGP 148 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM+ GQM DIQ E D + ++ I + KTG L+ F + ++A A+ +E+L + Sbjct: 149 EGMILGQMADIQGETKDLSLEELQFIHRNKTGELLKFPIYAACVIADAATEVEEQLMGYA 208 Query: 215 ENLGIIFQLADDLLDC 230 E++G+ +Q+ DD+LD Sbjct: 209 EHIGLAYQIRDDILDV 224 >gi|241760634|ref|ZP_04758726.1| geranyltranstransferase [Neisseria flavescens SK114] gi|241318815|gb|EER55341.1| geranyltranstransferase [Neisseria flavescens SK114] Length = 298 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 7/209 (3%) Query: 29 SHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 S Q H L A+RY LGG K++R LV + L N + AAIE +H YSL Sbjct: 28 SESQVPHT--LHEAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIEMVHVYSL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+P+MDN +RRGKPT H+QYDE TA++ G+ L T AF+++S P T L + ++ Sbjct: 86 VHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRP-TGLSAERQLAML 144 Query: 148 LSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQ 204 +L G GM GGQ +D+ + + +++ ++ + +KTGAL+ A GA+ + Sbjct: 145 STLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKTGALIRAAVALGALSCPDLTP 204 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + L + LG+ FQ+ DD+LDCE D Sbjct: 205 AQIQTLDHYAAKLGLAFQVIDDVLDCEAD 233 >gi|269121046|ref|YP_003309223.1| polyprenyl synthetase [Sebaldella termitidis ATCC 33386] gi|268614924|gb|ACZ09292.1| Polyprenyl synthetase [Sebaldella termitidis ATCC 33386] Length = 290 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/208 (38%), Positives = 127/208 (61%), Gaps = 4/208 (1%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + ++ +RL ++ Y+++ GGK++R L+ A +FN ++ AA+ECIH YSL+HD Sbjct: 23 ELKYPERLAESMIYSVMNGGKRLRPVLMYMIADIFNQDYSRIEDTAAALECIHSYSLVHD 82 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP+MD+ RRGK T H ++DE TAI+AG+ LLTYAF +IS+ + +++++ + ++ L Sbjct: 83 DLPAMDDDTYRRGKLTTHKKFDEATAILAGDALLTYAFYVISASE-KIENSGKVNIIRIL 141 Query: 151 THNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + G+ GM+GGQ +D++ E I + I KTG L+ A E +KE Sbjct: 142 SDYSGINGMVGGQYVDMESENKEISFDTLKYIHSHKTGKLLKAAVELPLEALAIEGKQKE 201 Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236 L + E +GI FQ+ DDLLD E D K Sbjct: 202 VLLEYSELIGIAFQIKDDLLDIEGDFEK 229 >gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. SG-1] gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. SG-1] Length = 295 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 122/199 (61%), Gaps = 6/199 (3%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +++ A+ Y+L GGK+IR L+ + L AA+E IH YSLIHDDLPSM Sbjct: 32 EKVKEAMAYSLKAGGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLPSM 91 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNI 154 DN +RRGKPT H + E TAI+AG+GLLTY+FE+++ +P + IR L+ L + Sbjct: 92 DNDDLRRGKPTNHKVFGEATAILAGDGLLTYSFEVLAGTPDVSAEKLIR--LVSLLAKSA 149 Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G +GM+GGQ D++ E + ++ I K KTG L+ F+ + AI+A +++ + L Sbjct: 150 GPEGMVGGQAADMEGESQSLSVEELEYIHKNKTGRLLAFSVMAAAILADSTEEQISLLEE 209 Query: 213 FGENLGIIFQLADDLLDCE 231 + ++G+ FQ+ DD+LD E Sbjct: 210 YAFHIGLAFQIQDDILDVE 228 >gi|225076775|ref|ZP_03719974.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens NRL30031/H210] gi|224951873|gb|EEG33082.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens NRL30031/H210] Length = 298 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 7/209 (3%) Query: 29 SHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 S Q H L A+RY LGG K++R LV + L N + AAIE +H YSL Sbjct: 28 SESQVPHT--LHEAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIEMVHVYSL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+P+MDN +RRGKPT H+QYDE TA++ G+ L T AF+++S P T L + ++ Sbjct: 86 VHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRP-TGLPAERQLAML 144 Query: 148 LSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQ 204 +L G GM GGQ +D+ + + +++ ++ + +KTGAL+ A GA+ + Sbjct: 145 STLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKTGALIRAAVALGALSCPDLTP 204 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + L + LG+ FQ+ DD+LDCE D Sbjct: 205 AQIQTLDHYAAKLGLAFQVIDDVLDCEAD 233 >gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri] gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri] Length = 345 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 80/208 (38%), Positives = 120/208 (57%), Gaps = 6/208 (2%) Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + + + +RL ++RY+LL GGK+IR L L + TA+ A+E IH SL Sbjct: 69 ASVPVHYPERLSESMRYSLLAGGKRIRPALCLAACELVGGDMETAMPTACALEMIHTMSL 128 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLPSMDN RRGKPT H Y E AI+AG+ LL++AFE I +++ Sbjct: 129 IHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETKGASAEKVLRVI 188 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHA 202 + + +G +G++GGQ++DI E V + I KTGAL+ + +GAI+ A Sbjct: 189 VDVGKCVGSEGLVGGQVVDIMSEGAGPENVTVDTLKYIHAHKTGALLEVSVTAGAILGGA 248 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230 S+ + +L + +N+G+ FQ+ DD+LDC Sbjct: 249 SEEQIGKLERYAQNIGLAFQVVDDILDC 276 >gi|317047156|ref|YP_004114804.1| polyprenyl synthetase [Pantoea sp. At-9b] gi|316948773|gb|ADU68248.1| Polyprenyl synthetase [Pantoea sp. At-9b] Length = 299 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/208 (40%), Positives = 120/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + L++A++Y ALLGGK++R FLV + + + AA+ECIH YSLIHDDLP Sbjct: 28 QSSPLVNAMQYGALLGGKRLRPFLVYATGEMLKADPASLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG+PT HI+Y E TAI+AG+ L T AF I++ P + R ++ L Sbjct: 88 AMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQPMPGVSAEARITMISELAQ 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E ID Q+ I + KTGAL+ A GA+ A E+ R Sbjct: 148 ASGVAGMCGGQALDLAAEGQSIDLAQLEQIHRHKTGALIRAAVRLGALAA----GEQGRA 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 204 ALPVLDVYANAIGLAFQVQDDILDVVGD 231 >gi|153937414|ref|YP_001387682.1| geranyltranstransferase [Clostridium botulinum A str. Hall] gi|152933328|gb|ABS38827.1| putative geranyltranstransferase [Clostridium botulinum A str. Hall] Length = 290 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 83/216 (38%), Positives = 131/216 (60%), Gaps = 6/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L+ + ++ + A+ Y+L GGK+IR L SL+ ++ A+ + AAIE Sbjct: 12 ELWLKEYLDNKGNYDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ + LK+ Sbjct: 72 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + ++ G+ GM+GGQ++DI +D+ I +++ + K KTGAL+ + +GA Sbjct: 130 GEKALEACYAIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGA 189 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+ + + E L +G+NLG+ FQ+ DD+LD E D Sbjct: 190 ILGSDTYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225 >gi|329895161|ref|ZP_08270845.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088] gi|328922475|gb|EGG29816.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088] Length = 298 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 86/207 (41%), Positives = 124/207 (59%), Gaps = 13/207 (6%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECA-------SLFNVNHLTALRVGAA-IECIHCYSLI 88 +L A+ Y+L +GGK++R LV A +LF N LT L + AA IE IH YSL+ Sbjct: 30 QLADAVAYSLKVGGKRLRPALVYSAAASLRADLTLFPPN-LTPLDLAAAAIESIHTYSLV 88 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MDN +RRG+PTVH QYDE TAI+ G+ L +AFE+++ T D + + ++ Sbjct: 89 HDDLPAMDNDDLRRGQPTVHRQYDEATAILVGDALQAWAFELLTQIDTLPADKVVA-MVK 147 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNE 206 L G +GM+ GQ LD+Q E+ ++ Q +KTGAL+ A GA +A E Sbjct: 148 ELAQASGPKGMVLGQALDMQATGASESVDYLKQLHSLKTGALIRSALRLGAYCMNAGSKE 207 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 + L +G+ +G+ FQ+ DD+LD D Sbjct: 208 RRVLSAYGDAIGLCFQVVDDILDVTTD 234 >gi|319638772|ref|ZP_07993531.1| geranyltranstransferase [Neisseria mucosa C102] gi|317400013|gb|EFV80675.1| geranyltranstransferase [Neisseria mucosa C102] Length = 298 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 126/216 (58%), Gaps = 5/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +LLL ++Q L A+RY LGG K++R LV + L N + AAIE Sbjct: 19 ELLLAHFLPYESQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIE 78 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H YSL+HDD+P+MDN +RRGKPT H+QYDE TA++ G+ L T AF+++S P T L Sbjct: 79 MVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRP-TGLPA 137 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L G GM GGQ +D+ + + +++ ++ + +KTGAL+ A GA+ Sbjct: 138 ERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKTGALIRAAVALGAL 197 Query: 199 M-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + + L + LG+ FQ+ DD+LDCE D Sbjct: 198 SCPDLTPAQIQTLDRYAAKLGLAFQVIDDVLDCEAD 233 >gi|319792406|ref|YP_004154046.1| polyprenyl synthetase [Variovorax paradoxus EPS] gi|315594869|gb|ADU35935.1| Polyprenyl synthetase [Variovorax paradoxus EPS] Length = 304 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 80/195 (41%), Positives = 115/195 (58%), Gaps = 3/195 (1%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV + N ALR A E IH YSL+HDDLP MDN + Sbjct: 44 AMRYAVLDGGKRLRPLLVLAASEAVGGNEAAALRAACAAELIHAYSLVHDDLPCMDNDVL 103 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH+++ E A++AG+ L AFE+++ ++ ++ L L G QGM Sbjct: 104 RRGKPTVHVKFGEADALLAGDALQALAFELLAPEGDEIPAATQATLCRLLARAAGSQGMA 163 Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQ +D+ I +ETQ+ + ++KTGAL+ + E GA + S LR +G +G Sbjct: 164 GGQAIDLASVGIALNETQLREMHRLKTGALLQGSVEMGAACGNVSAAALAALRDYGAAIG 223 Query: 219 IIFQLADDLLDCEED 233 + FQ+ DD+LD D Sbjct: 224 LAFQVVDDILDVTAD 238 >gi|170757695|ref|YP_001781434.1| geranyltranstransferase [Clostridium botulinum B1 str. Okra] gi|169122907|gb|ACA46743.1| putative geranyltranstransferase [Clostridium botulinum B1 str. Okra] Length = 290 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 83/216 (38%), Positives = 132/216 (61%), Gaps = 6/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L+ + ++ ++ A+ Y+L GGK+IR L SL+ ++ A+ + AAIE Sbjct: 12 ELWLKGYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ + LK+ Sbjct: 72 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + ++ + GM+GGQ++DI +D+ I +++ + K KTGAL+ + +GA Sbjct: 130 GEKALKACYTIAKAAEVDGMIGGQVVDILSEDKSITLDELYYMHKKKTGALIKASILAGA 189 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+ A+ + E L +G+NLG+ FQ+ DD+LD E D Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225 >gi|149191099|ref|ZP_01869358.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1] gi|148835027|gb|EDL52005.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1] Length = 294 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 91/231 (39%), Positives = 129/231 (55%), Gaps = 14/231 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D LD Q RL+ A+RYALL GGK+ R FLV Sbjct: 4 ALKSYQQRNNEQLDAWLDHYPFQ---------EQRLIEAMRYALLLGGKRARPFLVYATG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F + AAIECIH YSLIHDDLP+MD+ +RRG+ T HIQ+DE TAI+ G+ Sbjct: 55 QIFGCTNEQLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQATCHIQFDEATAILTGDA 114 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179 L T AF I+S + + R ++ L H G GM GQ LD++ E + T ++ Sbjct: 115 LQTLAFTILSEGELASFANEQRITMVQKLAHASGAAGMCIGQALDLEAENRNVTLEELER 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLD 229 I + KTGAL+ A + GA+ A + +L + + +G+ FQ+ DD+LD Sbjct: 175 IHRHKTGALIKCAVQLGALAAGDKGVQYLPQLENYADAIGLAFQVQDDILD 225 >gi|225849919|ref|YP_002730153.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Persephonella marina EX-H1] gi|225646113|gb|ACO04299.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Persephonella marina EX-H1] Length = 290 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 120/199 (60%), Gaps = 10/199 (5%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPS 94 ++L A+ Y+L GGK++R LV E A + + + + A E IH YSLIHDDLP+ Sbjct: 28 EKLFDAMAYSLSAGGKRLRPILVLESAKAVGMEDIKDIVDIAVATEFIHTYSLIHDDLPA 87 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRGKPT HI Y E AI+AG+GL +YAFE+IS +T D + + + L+H Sbjct: 88 MDDDELRRGKPTCHIVYGEAIAILAGDGLQSYAFELISKNRTVPPDKLLKVINI-LSHGT 146 Query: 155 GLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G+ GM+GGQ DI ++ F D + I KT + C+ G ++A A++ E+ L Sbjct: 147 GIYGMVGGQAADILHEKENSFND---INFIHTHKTAKFIQSCCQMGGVLADATEEEEISL 203 Query: 211 RCFGENLGIIFQLADDLLD 229 + +G +G+ FQ+ DD+LD Sbjct: 204 KNYGLYIGLAFQIQDDILD 222 >gi|226941241|ref|YP_002796315.1| IspA [Laribacter hongkongensis HLHK9] gi|226716168|gb|ACO75306.1| IspA [Laribacter hongkongensis HLHK9] Length = 297 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 116/212 (54%), Gaps = 7/212 (3%) Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L +H T L A+RYA L GGK++R LV + A+ECIH Sbjct: 25 LPAGTHAATP----LFDAMRYAALDGGKRVRPLLVFAAGDVSGATPEALSAAACAVECIH 80 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSL+HDDLP MD+ +RRGKPT HI + E A++AG+ L +AFE+++ P + + Sbjct: 81 AYSLVHDDLPCMDDDVLRRGKPTCHIAHGEAMALLAGDALQAHAFELLAIPLPGVVPARQ 140 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 ++ +L H G +GM GGQ +D+ +D+T + + +KTGAL+ A GA+ Sbjct: 141 LAMVSALAHAAGPRGMCGGQAIDLAAVGHALDQTALEYMHCLKTGALIQAAVRLGALAGS 200 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +E L + +G+ FQ+ DD+LDCE D Sbjct: 201 PDDDELAALDRYARRIGLAFQVIDDVLDCEAD 232 >gi|148379844|ref|YP_001254385.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502] gi|148289328|emb|CAL83424.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502] Length = 294 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 83/216 (38%), Positives = 131/216 (60%), Gaps = 6/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L+ + ++ + A+ Y+L GGK+IR L SL+ ++ A+ + AAIE Sbjct: 16 ELWLKEYLDNKGNYDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 75 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ + LK+ Sbjct: 76 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 133 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + ++ G+ GM+GGQ++DI +D+ I +++ + K KTGAL+ + +GA Sbjct: 134 GEKALEACYAIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGA 193 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+ + + E L +G+NLG+ FQ+ DD+LD E D Sbjct: 194 ILGSDTYTDIELLGEYGDNLGLAFQIKDDILDVEGD 229 >gi|238754213|ref|ZP_04615570.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473] gi|238707460|gb|EEP99820.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473] Length = 305 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 92/243 (37%), Positives = 133/243 (54%), Gaps = 10/243 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN G P + ++ LL + + H+D L+ A+RY LLGGK++R +LV Sbjct: 1 MNMGEPVLFNQQLAVYQQRANNALLSFIAPLPFNHSD-LVQAMRYGTLLGGKRLRPYLVY 59 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +F V T AA+ECIH YSL+HDDLP+MDN +RRG+PT HI++ E AI+A Sbjct: 60 ATGQMFGVPLATLDAPAAAVECIHAYSLMHDDLPAMDNDDLRRGQPTCHIKFGEANAILA 119 Query: 120 GNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDE 174 G+ L T AF I++ P L+D I ++ L G+ GM GGQ LD+ ++ I Sbjct: 120 GDALQTLAFSILADAPMPDVTLQDRI--SMLSELATASGVAGMCGGQALDLAAEERQISL 177 Query: 175 TQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T++ I + KTGAL+ A A+ A A +L + +G+ FQ+ DD+LD D Sbjct: 178 TELEKIHRHKTGALIRTAVRMAALTAGTAGHLAMPQLDRYANAIGLAFQVQDDILDVIGD 237 Query: 234 LPK 236 K Sbjct: 238 TAK 240 >gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans NG80-2] gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16] gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans NG80-2] gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16] Length = 297 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 4/204 (1%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q + L A+ Y+L GGK+IR L+ N L V AIE IH YSLIHD Sbjct: 27 QLHGPETLKKAMAYSLEAGGKRIRPLLLLSTIQALGQNPSLGLPVACAIEMIHTYSLIHD 86 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLS 149 DLPSMDN +RRGKPT H + E AI+AG+GLLTYAF++I+ ++ ++R QL+ Sbjct: 87 DLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLIAEIHDERVPVDVRLQLIAE 146 Query: 150 LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G +GM+ GQ+ D++ E + ++ I + KTG ++ ++ +GA++ A + Sbjct: 147 LAKAAGPEGMVAGQVADMEGEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADARQM 206 Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231 L F +LG+ FQ+ DD+LD E Sbjct: 207 RELNEFAAHLGLAFQIRDDILDIE 230 >gi|148544405|ref|YP_001271775.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016] gi|184153768|ref|YP_001842109.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112] gi|227363170|ref|ZP_03847304.1| geranyltranstransferase [Lactobacillus reuteri MM2-3] gi|325682725|ref|ZP_08162241.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A] gi|148531439|gb|ABQ83438.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016] gi|183225112|dbj|BAG25629.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112] gi|227071776|gb|EEI10065.1| geranyltranstransferase [Lactobacillus reuteri MM2-3] gi|324977075|gb|EGC14026.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A] Length = 290 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 114/196 (58%), Gaps = 6/196 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMD 96 L A+ Y+L+ GGK++R L + + LR +A+E +H YSLIHDDLP+MD Sbjct: 29 LRDAMNYSLMAGGKRLRPALTLATIEMLGGTLNDDLLRAASALELLHTYSLIHDDLPAMD 88 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H ++ A +AG+GLLT AF+ ++ L NIRSQL L L G Sbjct: 89 NDDLRRGKPTNHCKFGAGMATLAGDGLLTMAFQWVAD--NHLPANIRSQLTLELAKAAGP 146 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+ GQ DI+ E T Q+ + + KTG L+ +A +G IM S K+ L FG Sbjct: 147 SGMVAGQARDIEGEHQHLTLNQLRYLHRQKTGELIRYAVLAGGIMMDQSAEIKQELAAFG 206 Query: 215 ENLGIIFQLADDLLDC 230 EN G+ FQ+ DDL+D Sbjct: 207 ENYGLAFQIYDDLMDV 222 >gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032] gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032] Length = 298 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/234 (39%), Positives = 144/234 (61%), Gaps = 12/234 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 + + L + +R++ L L+L+ A +QH + ++RY+L +GGK+IR L A Sbjct: 3 IATYLNDQRQRVEDQLAALMLKPAGDF-SQH----IESMRYSLFVGGKRIRPILCLAGAE 57 Query: 64 LFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + T AL V A+ECIH YSLIHDDLP+MD+ +RRGKPT H + E AI+AG Sbjct: 58 AVDSGEATRQRALSVACALECIHTYSLIHDDLPAMDDDDLRRGKPTNHTVFGEAAAILAG 117 Query: 121 NGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177 +GLLT+AF+++SS + D R +++ ++ G GM+GGQ LD+ + + + + Sbjct: 118 DGLLTFAFDLLSSQASADINDAARIRIIQTIARAAGPLGMVGGQSLDMIYEGQQVGYEML 177 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I + KTGAL+ + SGA++A AS ++ L+ +G+N+G+ FQ+ DDLLD E Sbjct: 178 RTIHRSKTGALITASVLSGAMVAGASAEQETALKTYGDNIGLAFQIVDDLLDVE 231 >gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] Length = 294 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 80/198 (40%), Positives = 118/198 (59%), Gaps = 4/198 (2%) Query: 42 AIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY++LGG K++R LV A N L A+E IH YSL+HDDLP+MDN Sbjct: 36 AMRYSVLGGGKRLRPALVMAGAEAVGGNAADVLPAACAVELIHTYSLVHDDLPAMDNDDY 95 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG+ T H Y E AI+AG+ LLT AFE++++ +NI +++ G G++ Sbjct: 96 RRGRLTNHKVYGEAAAILAGDALLTLAFELLANNDRARPENI-VRVIREAAAAAGTMGLI 154 Query: 161 GGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQ++D + IDE+ + I + KTGAL F+ +GA++A A + + L + E+LG Sbjct: 155 GGQVVDTFSAGKEIDESTLEYIHRHKTGALYRFSVRAGAMLAGAQEEQLASLTAYAEHLG 214 Query: 219 IIFQLADDLLDCEEDLPK 236 + FQ+ DD+LD E D K Sbjct: 215 LAFQIKDDILDVEGDEKK 232 >gi|303252274|ref|ZP_07338440.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247789|ref|ZP_07529826.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307256855|ref|ZP_07538633.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261287|ref|ZP_07542962.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|302648733|gb|EFL78923.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855732|gb|EFM87898.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306864589|gb|EFM96494.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869018|gb|EFN00820.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 297 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 127/201 (63%), Gaps = 6/201 (2%) Query: 35 HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 ++ L+ A+ YA LLGGK++R FL+ + +V AA+E IH YSL+HDDLP Sbjct: 30 YDSALIEAMSYAVLLGGKRVRPFLIYATGRMLDVPLEQLDHSAAAMEAIHAYSLVHDDLP 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT HI +DE TAI+AG+ L ++AFE+I ++ L D+ + + + SLT Sbjct: 90 AMDDDKLRRGKPTCHIAFDEATAILAGDALQSFAFELIVQDES-LTDSQKVRQIQSLTQA 148 Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KER 209 G +GM GQ LD+ +D+ ++ ++ +I + KTGAL+ + G ++ SQN K+ Sbjct: 149 AGARGMCLGQSLDLLAEDKAVNLAELELIHRNKTGALIIASVLMGFNLSVHSQNLAIKQP 208 Query: 210 LRCFGENLGIIFQLADDLLDC 230 L + + +G+ FQ+ DD+LD Sbjct: 209 LERYAQAIGLAFQVQDDILDV 229 >gi|46143506|ref|ZP_00135080.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208283|ref|YP_001053508.1| geranyltranstransferase [Actinobacillus pleuropneumoniae L20] gi|303251195|ref|ZP_07337374.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307245667|ref|ZP_07527753.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307250028|ref|ZP_07531996.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252381|ref|ZP_07534278.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254629|ref|ZP_07536460.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259080|ref|ZP_07540810.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|126097075|gb|ABN73903.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302649929|gb|EFL80106.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306853369|gb|EFM85588.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306857950|gb|EFM90038.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860303|gb|EFM92319.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862424|gb|EFM94387.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866747|gb|EFM98605.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 297 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/201 (39%), Positives = 126/201 (62%), Gaps = 6/201 (2%) Query: 35 HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 ++ L+ A+ YA LLGGK++R FL+ + +V AA+E IH YSL+HDDLP Sbjct: 30 YDSALIEAMSYAVLLGGKRVRPFLIYATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLP 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT HI +DE TAI+AG+ L ++AFE+I+ ++ L D+ + + + SL Sbjct: 90 AMDDDKLRRGKPTCHIAFDEATAILAGDALQSFAFELIAQDES-LTDSQKVRQIQSLAQA 148 Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KER 209 G +GM GQ LD+ +D ++ ++ +I + KTGAL+ + G ++ SQN K+ Sbjct: 149 AGARGMCLGQSLDLLAEDTAVNLAELELIHRNKTGALIIASVLMGFNLSAHSQNLAIKQP 208 Query: 210 LRCFGENLGIIFQLADDLLDC 230 L + + +G+ FQ+ DD+LD Sbjct: 209 LERYAQAIGLAFQVQDDILDV 229 >gi|585326|sp|Q08291|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus] Length = 297 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 118/198 (59%), Gaps = 4/198 (2%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+ Y+L GGK+IR L+ + L V AIE IH YSLIHDDLPSMD Sbjct: 33 KLKKAMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIG 155 N +RRGKPT H + E AI+AG+GLLTYAF++I+ ++ ++R +L+ L G Sbjct: 93 NDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLITEIDDERIPPSVRLRLIERLAKAAG 152 Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +GM+ GQ D++ E + +++ I + KTG ++ ++ +GA++ A + L F Sbjct: 153 PEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVHAGALIGGADARQTRELDEF 212 Query: 214 GENLGIIFQLADDLLDCE 231 +LG+ FQ+ DD+LD E Sbjct: 213 AAHLGLAFQIRDDILDIE 230 >gi|114776787|ref|ZP_01451830.1| geranyltranstransferase [Mariprofundus ferrooxydans PV-1] gi|114552873|gb|EAU55304.1| geranyltranstransferase [Mariprofundus ferrooxydans PV-1] Length = 295 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 94/229 (41%), Positives = 147/229 (64%), Gaps = 11/229 (4%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA-S 63 P+ L ++ ++ L +L AS + +RLLSA+RY+L+ GGK++R L+ E + Sbjct: 4 PAFLATHATTVEQALCAMLDARASVV----PERLLSAMRYSLMAGGKRVRPALLLESYLA 59 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +H A+ AIECIH YSLIHDDLP MD+ +RRGKPT H ++DE TA++A + L Sbjct: 60 CGGKDHAAAMPAMLAIECIHTYSLIHDDLPCMDDDDLRRGKPTCHRRFDEATAVLAADAL 119 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 AFE+++ + +L +R +L+ L G QGM+GGQM+D+Q E + + M++++ Sbjct: 120 QALAFELLA--EAELDPELRLELIRKLALAAGCQGMVGGQMMDMQAEHDSDIDMLMVERI 177 Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+C+ CE+GA++A A E E +G+ +G++FQ+ADD+LD Sbjct: 178 HLHKTGALLCWCCEAGAMLAGAGTAELEASSRYGKAVGLLFQVADDILD 226 >gi|194466515|ref|ZP_03072502.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23] gi|194453551|gb|EDX42448.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23] Length = 290 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 8/196 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 L A+ Y+L+ GGK++R L + +N LR +A+E +H YSLIHDDLP+M Sbjct: 29 LRDAMNYSLMAGGKRLRPALTLATIEMLGGTIND-DLLRAASALELLHTYSLIHDDLPAM 87 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRGKPT H ++ A +AG+GLLT AF+ ++ L N+RSQL L L G Sbjct: 88 DNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVAD--NHLPANVRSQLTLELAKAAG 145 Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+ GQ DI+ E T Q+ + + KTG L+ +A +G IM S K+ L F Sbjct: 146 PSGMVAGQARDIEGEHQHLTLNQLRYLHRQKTGELIRYAVLAGGIMMDQSAEIKQELAAF 205 Query: 214 GENLGIIFQLADDLLD 229 GEN G+ FQ+ DDL+D Sbjct: 206 GENYGLAFQIYDDLMD 221 >gi|298370440|ref|ZP_06981756.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314] gi|298281900|gb|EFI23389.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314] Length = 298 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 127/216 (58%), Gaps = 5/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +LLL+ + Q L A+RY LGG K++R LV + L + + + AAIE Sbjct: 19 ELLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIE 78 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H YSL+HDD+P+MDN +RRGKPT H++YDE TA++ G+ L T AF+++S P T L Sbjct: 79 MVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRP-TGLPA 137 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L G GM GGQ +D+ + + +++ Q+ + +KTGAL+ A GA+ Sbjct: 138 ERQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAAVLGAL 197 Query: 199 MAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 ++ R L + LG+ FQ+ DD+LDCE D Sbjct: 198 ACPDLDSDDVRTLDNYAAKLGLAFQVIDDVLDCEAD 233 >gi|301156308|emb|CBW15779.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1] Length = 297 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 122/202 (60%), Gaps = 6/202 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 +N L A++Y LL GGK++R FLV + AAIE IH YSLIHDDLP Sbjct: 30 YNAPLRDAMKYGLLLGGKRVRPFLVYATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLP 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN +RRG+PT HI +DE TAI+AG+ L +AFEI++ + L + QL+ L Sbjct: 90 AMDNDELRRGQPTCHIAFDEATAILAGDALQAFAFEILTEAPS-LSAEQKLQLVKVLAQA 148 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KER 209 G+QGM GQ LD+ E ++ ++ +I + KTGAL+ A + G I + +N+ +++ Sbjct: 149 SGVQGMCLGQSLDLISEHKQVNLDELELIHRNKTGALLTAALKLGFICSPHFENKELEQQ 208 Query: 210 LRCFGENLGIIFQLADDLLDCE 231 L + + +G+ FQ+ DD+LD E Sbjct: 209 LERYSQAIGLAFQVQDDILDIE 230 >gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3] gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3] Length = 295 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 88/233 (37%), Positives = 128/233 (54%), Gaps = 10/233 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + L K ++ LD +L RL SA+R++L GGK++R L A Sbjct: 4 LETYLARRQKAVNEALDRILADCVP------GGRLFSAMRHSLKAGGKRLRPILCMAAAE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 AL G AIE IH YSL+HDDLP++DN +RRG+P H +DE TAI AG+ L Sbjct: 58 AVGGTWEDALFPGCAIELIHTYSLVHDDLPAIDNDPLRRGQPACHAAFDEATAIFAGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180 T AFE++SS + R ++ L + G GM+ GQM DI Q + Q+ + Sbjct: 118 HTLAFEVLSSDRYIFFQGKRRLALIHLISRATGNHGMIEGQMRDILAQGGNLGLDQLKEL 177 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++KTGAL+ + +GA+ A+ + +L + EN+G+ FQ+ADDLL+ E D Sbjct: 178 HRLKTGALITASVHAGALTGKATVRQTGKLIEYAENIGLAFQVADDLLNVEGD 230 >gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121] gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121] Length = 293 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 124/202 (61%), Gaps = 7/202 (3%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPS 94 ++L +A+RY+L GGK+IR L A L +++ LT AA+E IH YSLIHDDLP+ Sbjct: 29 NQLHNAMRYSLFNGGKRIRPMLTYASAQLVGDISSLTDAS-AAALESIHAYSLIHDDLPA 87 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN +RRGKPT HIQ+DE TAI+AG+ L T+AFE++S+P T + + +L+ L Sbjct: 88 MDNDELRRGKPTCHIQFDEATAILAGDALQTFAFELLSNP-TSAQPELAIKLIQELVVAS 146 Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLR 211 G GM+ GQM+D+ E I ++ + KTGAL+ + GA+ + E+ +L Sbjct: 147 GRNGMITGQMIDLSSENKNISLAELEQMHVHKTGALIKASVRMGALSTGQVKPEQLAKLD 206 Query: 212 CFGENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD++D D Sbjct: 207 AYAHAIGLAFQVQDDIIDLTSD 228 >gi|329121102|ref|ZP_08249733.1| geranyltranstransferase [Dialister micraerophilus DSM 19965] gi|327471264|gb|EGF16718.1| geranyltranstransferase [Dialister micraerophilus DSM 19965] Length = 284 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/198 (39%), Positives = 125/198 (63%), Gaps = 5/198 (2%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L ++ Y+LL GK+IR L +F V++L L + A++EC+H YSLIHDDLP MDN Sbjct: 31 LFDSMNYSLLSNGKRIRGCLFLFILEMFKVDYLQYLDIAASVECVHTYSLIHDDLPCMDN 90 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG T H +Y E A+ AG+ LLT+AF++IS K +D R +L+ L+ G + Sbjct: 91 DDYRRGILTNHKKYGEGVALQAGDALLTFAFQLISQAKFSAED--RCKLIEILSIAAGAE 148 Query: 158 GMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+ GQ+ DIQ ++ I+ ++ ++ K KTG ++ + + H S ++ ++LR F + Sbjct: 149 GMVAGQVHDIQIENKSIELDELKLLDKFKTGRMIKTPVDMAIQLTHMSISDADQLRKFAK 208 Query: 216 NLGIIFQLADDLLDCEED 233 +LG++FQ+ DD+LD +ED Sbjct: 209 HLGLLFQITDDILDYKED 226 >gi|300854301|ref|YP_003779285.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528] gi|300434416|gb|ADK14183.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528] Length = 293 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 88/224 (39%), Positives = 134/224 (59%), Gaps = 8/224 (3%) Query: 16 IDTILDDLLLQTASHMQTQ--HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 I+T+ ++L +M+ + +N R+ A++Y+L GGK+IR L L+ + Sbjct: 7 IETLREELNKYLYDYMEGKGSYNKRVYEAMQYSLDAGGKRIRPLLFLLTYKLYKTDCNEV 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E A++AG+GLL A ++ Sbjct: 67 MDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAVLAGDGLLNEAMSLMF 126 Query: 133 SPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALM 189 KDN IR+ ++S + G GM+GGQ +DI ++ I Q++ + KTGAL+ Sbjct: 127 RHCIGKKDNAIRACSIIS--ESAGADGMVGGQTVDILSENTKIPIDQLYYMHSKKTGALI 184 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + S A+ A AS+ E ++L +GE LG+ FQ+ DD+LD D Sbjct: 185 KGSIISAAVYAGASKAEIDKLSYYGEKLGLAFQIKDDILDLTGD 228 >gi|313672239|ref|YP_004050350.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM 19672] gi|312938995|gb|ADR18187.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM 19672] Length = 298 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 87/224 (38%), Positives = 138/224 (61%), Gaps = 14/224 (6%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71 +K++D+ L+ ++ +Q+ D L+ A+RY+L GGK++R L+ +F+ Sbjct: 13 AKKVDSWLEQYVIS-----NSQYIDGLVEAMRYSLFAGGKRLRPALIYSSFGIFDGYFDK 67 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 AA+E +H YSLIHDDLP+MD+ +RRGKPT H+ Y E AI+AG+ LLT AFEI+ Sbjct: 68 VTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHVVYGEGVAILAGDALLTKAFEIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 +S + L ++ +ML + + G +GM+GGQ D++ E F ++ V I KT Sbjct: 128 TS--SSLNPDVDPVMMLEAANKLAIATGEKGMVGGQYADLKAEGGFFNDGTVSFIHLNKT 185 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AL+ + CE GAI+ +A+ EK+ + FG+ +G+ FQ+ DD+LD Sbjct: 186 AALISYCCELGAILGYATDEEKKDMSQFGKKIGLAFQIIDDILD 229 >gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] Length = 292 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 86/228 (37%), Positives = 130/228 (57%), Gaps = 8/228 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 KL+ I++ +D L A+ H + +L ++R GGK++R LV LF+ Sbjct: 6 KLRTYQSEIESAVDQYLPAEATRPSRIH-EAMLYSMR---AGGKRLRPVLVLASKELFD- 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + L A+ A+EC+H YSLIHDDLPS+D+G +RRGKPT H Q+DE TA++AG+ LL YA Sbjct: 61 SELDAMPAAIAVECLHTYSLIHDDLPSIDDGDLRRGKPTSHKQFDEATAVLAGDALLAYA 120 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F++++ D + + L+ L G + ++GGQM DI E + E + I KT Sbjct: 121 FQLLARHFANAPD-VCANLVGELGETAGSERLIGGQMEDILGEGGPLSEDTLNFIHLNKT 179 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 AL+ G I+ A+ + + LR +G +GI FQ+ DD+LD D Sbjct: 180 SALIECCLVMGGIIGGANYEQIDALRTYGREIGIAFQIIDDILDATSD 227 >gi|119502847|ref|ZP_01624932.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080] gi|119461193|gb|EAW42283.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080] Length = 280 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 5/202 (2%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLP 93 + RL +A++Y L GKK+R+ LV + A AIE +H YSL+HDDLP Sbjct: 15 DPRLAAALQYVLENSGKKLRARLVMASYHMLCEGADDAAASAATAIEWLHTYSLVHDDLP 74 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPTVH YDE TAI+ G+GL AF +IS + +L R +L+ + + Sbjct: 75 AMDDDALRRGKPTVHTVYDEATAILIGDGLQAAAFSLISEDE-RLASGTRLKLITLIANA 133 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 +G GM+GGQ LD+ + T Q+ +I + KTGAL A SGA+ A+A++ + +RL Sbjct: 134 VGFNGMVGGQALDMAAQGKASTFEQLRLIHEQKTGALFRAAVLSGAVCANATEQDIQRLD 193 Query: 212 CFGENLGIIFQLADDLLDCEED 233 F +G+ FQ+ADD+LD E+ Sbjct: 194 QFASTIGLAFQVADDILDVTEN 215 >gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C] gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 295 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 81/228 (35%), Positives = 123/228 (53%), Gaps = 14/228 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L ++ ID LD L Q + + H A+RY++ GGK++R L A Sbjct: 6 LAAKAETIDAALDRYLRQASENPPVIHE-----AMRYSVFAGGKRLRPALTLAAAQAVGA 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L AIE IH YSLIHDDLP+MDN +RRGKPT H + E A++AG+ L A Sbjct: 61 PERLVLPAACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVFGEAVALLAGSALFALA 120 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDI--QDEFIDETQVFMIQ 181 FE+++ + + ++ +L++ + G G++GGQ LD+ + E ++ + Sbjct: 121 FEVLAGCRRD--GGLAAERILAVVEEVAAACGTAGLIGGQALDVVSVSRTVSEAELEAVH 178 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + KTGAL A +GA++ AS + ERL F E+ G+ FQ+ DD+LD Sbjct: 179 RAKTGALFRAAVRAGAVLGGASPVQLERLTVFAEHFGLAFQITDDILD 226 >gi|167855502|ref|ZP_02478265.1| geranyltranstransferase [Haemophilus parasuis 29755] gi|167853368|gb|EDS24619.1| geranyltranstransferase [Haemophilus parasuis 29755] Length = 297 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 88/237 (37%), Positives = 137/237 (57%), Gaps = 15/237 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN L ++L + +RI+ L + L Q ++ N L+ A+ YA LLGGK++R FL+ Sbjct: 1 MNYDLFAELSQYQQRINHFLSEQLSQYPAY-----NTPLIDAMSYAVLLGGKRVRPFLIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + V A+E IH YSL+HDDLP+MDN +RRGKPT HI +DE TAI+A Sbjct: 56 ATGKMLGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175 G+ L ++AFE+++ + + +Q M L + G +GM GQ LD+Q E +DE Sbjct: 116 GDALQSFAFELLAFDPSLTAEQKVAQ-MQWLAKSAGAKGMCLGQSLDLQSEHKAIALDEL 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDC 230 + I + KTGAL+ + G ++ +Q+ K++L + + +G+ FQ+ DD+LD Sbjct: 175 E--RIHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAKAIGLAFQVQDDILDV 229 >gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804] gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii] Length = 303 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 84/234 (35%), Positives = 131/234 (55%), Gaps = 16/234 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 LQ ++ I+ +LD+ L A + RL A+RYA+LGG K+IR+ LV V Sbjct: 12 LQGRAQHIEAVLDECL-PAADALPA----RLHEAMRYAVLGGGKRIRAALVYAAGQACPV 66 Query: 68 N------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 N + R AA+E IH YSLIHDDLP MD+ +RRG+PT H+Q+DE TA++AG+ Sbjct: 67 NGSAVAIQASMDRAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGD 126 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179 L AFE+++ + + Q +L G GM GGQ +D+ + + ++ Sbjct: 127 ALQPLAFELLA--DMPIAPALVVQATQALARAAGSLGMAGGQAIDLHSVGQALSRDELQT 184 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + MKTGA++ + G I++ AS + ++ L + + +G+ FQ+ DD+LD D Sbjct: 185 MHSMKTGAMLACSVALGGIVSGASSSTRQALDDYAQAVGLAFQVVDDILDVTAD 238 >gi|299537767|ref|ZP_07051056.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1] gi|298726746|gb|EFI67332.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1] Length = 293 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 87/234 (37%), Positives = 134/234 (57%), Gaps = 11/234 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L ++ N+ +I+ + L+ Q + L ++ Y+L GGK+IR V Sbjct: 1 MNEPLKYFIESNTPQIEETMFSLVEQIDAPAD------LKESMLYSLKAGGKRIRPLFVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L+ N L VG+ IE IH YSLIHDDLPSMDN RRGKPT H Y E A +A Sbjct: 55 AVLELYRENLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 G+ L T AF I++ + + R +L+ L+ G +GM+GGQ+LD++ E ++ ++ Sbjct: 115 GDALNTLAFGILA--RMDIAAEKRIELVQLLSIAAGAEGMVGGQVLDMEGEQRQLNLAEL 172 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + KTGAL+ F+ E+GA++A S ++ L+ + ++G+ FQ+ DD+LD E Sbjct: 173 EQVHVNKTGALLRFSIEAGAVLADVSAQDRATLKEYAHHIGLAFQIQDDILDIE 226 >gi|291616530|ref|YP_003519272.1| IspA [Pantoea ananatis LMG 20103] gi|291151560|gb|ADD76144.1| IspA [Pantoea ananatis LMG 20103] Length = 299 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 82/200 (41%), Positives = 117/200 (58%), Gaps = 5/200 (2%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++A++Y ALLGGK++R FLV + + + + AA+ECIH YSLIHDDLP+MD+ Sbjct: 32 LVNAMQYGALLGGKRLRPFLVYATGEMLHADKASLDAPAAAVECIHAYSLIHDDLPAMDD 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI+Y E TAI+AG+ L T AF I++ P + R ++ L G+ Sbjct: 92 DALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQPMPGVSAEYRLAMLSELAKASGV 151 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213 GM GGQ LD+ E + Q+ I + KTGAL+ A GA A E L + Sbjct: 152 AGMCGGQALDLAAEGQSVGLAQLEQIHRHKTGALIRAAVRLGAFAAGEKGREALPYLDRY 211 Query: 214 GENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD D Sbjct: 212 ADAIGLAFQVQDDILDVTGD 231 >gi|327392961|dbj|BAK10383.1| geranyltranstransferase IspA [Pantoea ananatis AJ13355] Length = 299 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 82/200 (41%), Positives = 117/200 (58%), Gaps = 5/200 (2%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++A++Y ALLGGK++R FLV + + + + AA+ECIH YSLIHDDLP+MD+ Sbjct: 32 LVNAMQYGALLGGKRLRPFLVYATGEMLHADKASLDAPAAAVECIHAYSLIHDDLPAMDD 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI+Y E TAI+AG+ L T AF I++ P + R ++ L G+ Sbjct: 92 DALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQPMPGVSAEYRLAMLSELAKASGV 151 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213 GM GGQ LD+ E + Q+ I + KTGAL+ A GA A E L + Sbjct: 152 AGMCGGQALDLAAEGQSVGLAQLEQIHRHKTGALIRAAVRLGAFAAGEKGREALPYLDRY 211 Query: 214 GENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD D Sbjct: 212 ADAIGLAFQVQDDILDVTGD 231 >gi|255065407|ref|ZP_05317262.1| geranyltranstransferase [Neisseria sicca ATCC 29256] gi|255050232|gb|EET45696.1| geranyltranstransferase [Neisseria sicca ATCC 29256] Length = 298 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 81/216 (37%), Positives = 125/216 (57%), Gaps = 5/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +LLL+ + Q L A+RY LGG K++R LV + L + + + AAIE Sbjct: 19 ELLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIE 78 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H YSL+HDD+P+MDN +RRGKPT H++YDE TA++ G+ L T AF+++S P T L Sbjct: 79 MVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRP-TGLPA 137 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L G GM GGQ +D+ + + +++ Q+ + +KTG L+ A GA+ Sbjct: 138 ERQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGTLIRAAVVLGAL 197 Query: 199 M-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 N+ L + LG+ FQ+ DD+LDCE D Sbjct: 198 ACPDLDSNDVRTLDNYAAKLGLAFQVIDDVLDCEAD 233 >gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299] gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299] Length = 349 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 123/204 (60%), Gaps = 9/204 (4%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + +RL ++RY+LL GGK+IR L L A+ A+E IH SLIHDDLP Sbjct: 78 YPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMDVAMPTACALEMIHTMSLIHDDLP 137 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLT 151 SMDN RRGKPT H Y E AI+AG+ LL++AFE I +PK+ + ++++ + Sbjct: 138 SMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETPKSVPAERTL-RVIVDVG 196 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNE 206 +G +G++GGQ++DI E + +V + I KTGAL+ + +GAI+A A + + Sbjct: 197 KCVGSEGLVGGQVVDIMSEGAEAGEVTVETLQYIHAHKTGALLEVSVTAGAILAGAKEED 256 Query: 207 KERLRCFGENLGIIFQLADDLLDC 230 ERL + + +G+ FQ+ DD+LDC Sbjct: 257 VERLGKYAQLIGLAFQVVDDILDC 280 >gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM 16646] gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM 16646] Length = 296 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 90/229 (39%), Positives = 126/229 (55%), Gaps = 14/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 +L+E K I+ LD + ++ + Q H A+RY+ GGK+IR L + A LF Sbjct: 7 ELKEAGKIIEKALDFYIPKSNEYPQKIHE-----AMRYSTFNGGKRIRPVLTMKAAELFG 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + IE IH YSLIHDDLP MDN RRGKPT H + + A++AG+ LLT Sbjct: 62 LQGEKVIPTACGIEMIHTYSLIHDDLPIMDNDDFRRGKPTCHKVFGDAIALLAGDALLTL 121 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDI--QDEFIDETQVFMI 180 AF I K + I Q ++ + I G GM+GGQ +DI Q IDE +F + Sbjct: 122 AFNTIV--KNAQIEGISMQAVIDVIGRISRASGSLGMIGGQTVDILSQGVSIDEKTLFYM 179 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTG L+ + +GA +A A ++ +L FGE +G+IFQ+ DDLLD Sbjct: 180 DYHKTGCLIQASLWAGARLAEAPASDLNKLDIFGEKIGLIFQIVDDLLD 228 >gi|94500549|ref|ZP_01307080.1| Polyprenyl synthetase [Oceanobacter sp. RED65] gi|94427339|gb|EAT12318.1| Polyprenyl synthetase [Oceanobacter sp. RED65] Length = 294 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 122/201 (60%), Gaps = 7/201 (3%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+ Y+LL GGK++R +V + + A + A+E IH YSL+HDDLP+MD Sbjct: 31 RLKDAMTYSLLNGGKRVRPLMVYATTRSLSGDLQAADQCALAVEMIHAYSLVHDDLPAMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PT HI +DE TAI+AG+ L T AF+++ P + + +++ +L H GL Sbjct: 91 DDELRRGQPTCHIAFDEATAILAGDALQTQAFQVLVQPIDGMAPQQQLRMVQTLAHASGL 150 Query: 157 QGMLGGQMLDIQDEFID-ETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRC 212 GM GGQ LD+ E +D + + +Q M KTGAL+ + + G + A+AS+ + L Sbjct: 151 AGMAGGQSLDL--EAVDKQVDIEYLQNMHLHKTGALIEASVKLGGLCANASEQQLSYLSV 208 Query: 213 FGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD D Sbjct: 209 YAQAIGLAFQVQDDILDVISD 229 >gi|261365698|ref|ZP_05978581.1| geranyltranstransferase [Neisseria mucosa ATCC 25996] gi|288565797|gb|EFC87357.1| geranyltranstransferase [Neisseria mucosa ATCC 25996] Length = 298 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 127/216 (58%), Gaps = 5/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +LLL+ + Q L A+RY LGG K++R LV + L + + + AAIE Sbjct: 19 ELLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIE 78 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H YSL+HDD+P+MDN +RRGKPT H++YDE TA++ G+ L T AF+++S P T L Sbjct: 79 MVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRP-TGLPA 137 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L G GM GGQ +D+ + + +++ Q+ + +KTGAL+ A GA+ Sbjct: 138 EHQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAVVLGAL 197 Query: 199 MAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 ++ R L + LG+ FQ+ DD+LDCE D Sbjct: 198 ACPDLDSDDVRTLDDYAAKLGLAFQVIDDVLDCEAD 233 >gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941] gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941] Length = 299 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 114/199 (57%), Gaps = 6/199 (3%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RL A+RY+LL GGK++R L E A LF L AAIE IH YSLIHDDLP+M Sbjct: 33 ERLQEAMRYSLLAGGKRVRPLLCMESARLFGAPPERVLPSAAAIELIHTYSLIHDDLPAM 92 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN RRG+PT H ++ E AI+AG+ A +I+ + + R ++ L + G Sbjct: 93 DNDDFRRGRPTSHKKFGEAMAILAGDAFFGEALTLITVRQEGTCEQ-RLGVVQELASSTG 151 Query: 156 LQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + GM+GGQ+LD+ D +FMI + KTGAL+ + GAI+A A + E + Sbjct: 152 VNGMVGGQVLDMDQTGAGGSADPGMLFMIHRYKTGALIRSSARVGAILAGAGEEGLEAIS 211 Query: 212 CFGENLGIIFQLADDLLDC 230 + LG+ FQ+ DD+LD Sbjct: 212 RYATELGLCFQIVDDVLDA 230 >gi|296283988|ref|ZP_06861986.1| geranyltranstransferase [Citromicrobium bathyomarinum JL354] Length = 308 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 124/201 (61%), Gaps = 3/201 (1%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+R+A +GG K++R L+ A++ V+ A+ G A+E IH YSLIHDDLP MD+ Sbjct: 46 LVEAMRHAAIGGGKRVRPLLLVATATMLGVSREAAVLAGTAVESIHVYSLIHDDLPCMDD 105 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPTVH +DE TA++AG+ L AF+I++ I+++L+ L G+ Sbjct: 106 DDMRRGKPTVHKAFDEATAVLAGDALHALAFDILTDSSVSSDPFIQAELVRCLAQASGMS 165 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM GGQ +D+ + D + +Q++KTGAL+ + E GAI+A + + L + Sbjct: 166 GMAGGQAMDMAADSATYDLPTITRLQQLKTGALLTASVEMGAILARVPHDARGHLIAYAR 225 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 ++G+ FQ+ADDLLD E D K Sbjct: 226 DIGLAFQIADDLLDHEGDEDK 246 >gi|299822995|ref|ZP_07054881.1| geranyltranstransferase [Listeria grayi DSM 20601] gi|299816524|gb|EFI83762.1| geranyltranstransferase [Listeria grayi DSM 20601] Length = 293 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 120/205 (58%), Gaps = 7/205 (3%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RY+L GGK+IR L+ + AA+E IH YSLIHDDLP+MDN Sbjct: 32 LKKAMRYSLEAGGKRIRPILLFATLISLRTELEKGKKTAAALEMIHTYSLIHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK T H + + TAI+AG+GLLT AF ++S + L R +L+ + G + Sbjct: 92 DDYRRGKLTNHKVFGDATAILAGDGLLTLAFSLLSEEEA-LPAESRVKLIQLFAEHAGPE 150 Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+ GQ DI +D + ++ I + KTGAL+ A +GAI+A+A E+L + + Sbjct: 151 GMVAGQQADIEAEDRSVTLEELAAIHRKKTGALLKSAVLAGAIIANADAETYEKLNIYAD 210 Query: 216 NLGIIFQLADDLLDC---EEDLPKK 237 N+G+ FQ+ADD+LD E+ L KK Sbjct: 211 NIGVAFQIADDILDVVGDEQKLGKK 235 >gi|257464799|ref|ZP_05629170.1| geranyltranstransferase [Actinobacillus minor 202] gi|257450459|gb|EEV24502.1| geranyltranstransferase [Actinobacillus minor 202] Length = 299 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 33 TQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 + ++ L+ A+ YA LLGGK++R FL+ + V+ AA+E IH YSL+HDD Sbjct: 30 SAYHSPLIDAMAYAVLLGGKRVRPFLIYATGRMLGVSLEALDHSAAAMESIHAYSLVHDD 89 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ +RRGKPT HI +DE TAI+AG+ L T+AFE+I+ L D + + + SL Sbjct: 90 LPAMDDDKLRRGKPTCHIAFDEATAILAGDSLQTFAFELIAKDPF-LTDLQKVKQIQSLA 148 Query: 152 HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G +GM GQ LD+ +++ I +++ +I + KTGAL+ + G ++ +++EK + Sbjct: 149 QAAGARGMCLGQSLDLISENKAISLSELELIHRNKTGALIVASVLMGFNLSDYARDEKIK 208 Query: 210 --LRCFGENLGIIFQLADDLLDCEEDLPK 236 L C+ + +G+ FQ+ DD+LD D K Sbjct: 209 NALECYAKAIGLAFQVQDDILDVIGDTDK 237 >gi|42521829|ref|NP_967209.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100] gi|39574359|emb|CAE77863.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100] Length = 289 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 88/232 (37%), Positives = 128/232 (55%), Gaps = 11/232 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 + ++ Q ++ ++ L D+ L S + L SA GGK+ R L L Sbjct: 11 IAARTQAVNQFVEKYLSDMELPAGSAISELRKSMLYSATN----GGKRFRPVLSLLVGEL 66 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F L AA+E IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL Sbjct: 67 FGAGKERILPFAAAVEMIHTYSLIHDDLPCMDNDDMRRGKPTNHKVFGEDFALLAGDALL 126 Query: 125 TYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180 T AF +I+ DN + L L+ G++GM+GGQ +D++ D+ + ++ + Sbjct: 127 TEAFMLIAE---NYGDNSFLVGHLTRLLSSAAGIRGMVGGQAIDLRAGDKQMSLEELTHL 183 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++KTGAL+ A E A++A A E E L+ FGE LG+ FQ+ADD+LD E Sbjct: 184 HRLKTGALIRVAVEGAAVIAGAKPTEIESLKKFGEGLGLAFQVADDVLDHGE 235 >gi|308185891|ref|YP_003930022.1| geranyltranstransferase [Pantoea vagans C9-1] gi|308056401|gb|ADO08573.1| geranyltranstransferase [Pantoea vagans C9-1] Length = 264 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 83/192 (43%), Positives = 112/192 (58%), Gaps = 4/192 (2%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 ALLGGK++R FLV + + N + AA+ECIH YSLIHDDLP+MDN +RRG+P Sbjct: 5 ALLGGKRLRPFLVYATGEMLHANPASLDVPAAAVECIHAYSLIHDDLPAMDNDALRRGQP 64 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T HI+Y E TAI+AG+ L T AF I++ + R ++ L G+ GM GGQ Sbjct: 65 TCHIKYGEDTAILAGDALQTLAFSILADEAMPGVSAEYRLMMLSELAKASGVAGMCGGQA 124 Query: 165 LDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIF 221 LD+ E ID Q+ I + KTGAL+ A GA+ A + E L + E +G+ F Sbjct: 125 LDLAAEGKSIDLDQLEQIHRHKTGALIRSAVRLGALTAGDAGREALPLLDRYAEAIGLAF 184 Query: 222 QLADDLLDCEED 233 Q+ DD+LD D Sbjct: 185 QVQDDILDVIGD 196 >gi|284006403|emb|CBA71639.1| geranyltranstransferase [Arsenophonus nasoniae] Length = 302 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 85/201 (42%), Positives = 118/201 (58%), Gaps = 5/201 (2%) Query: 38 RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L++A++Y ALLGGK++R FLV + NV AA+ECIH +SLIHDDLP+MD Sbjct: 33 QLVAAMKYGALLGGKRLRPFLVYAIGDMLNVAVENLDVPAAAVECIHAFSLIHDDLPAMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIG 155 N +RRG+PT HI + E AI+AG+ L T AF+I+S S + D R ++ L G Sbjct: 93 NDNLRRGQPTCHISFGEAHAILAGDALQTLAFDILSRSAMPDVSDTYRLAMIAELATATG 152 Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRC 212 GM GGQ LD++ E ID T + I KTGAL+ A A+ A N+ L Sbjct: 153 AAGMCGGQALDMESEGQQIDFTTLETIHHHKTGALIRAAIRMSALTAGNQGNKLLPLLDN 212 Query: 213 FGENLGIIFQLADDLLDCEED 233 + +G++FQ+ DD+LD D Sbjct: 213 YANAIGLLFQVHDDILDVTGD 233 >gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB] gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB] Length = 296 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 115/198 (58%), Gaps = 3/198 (1%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 +L A RY+L GGK++R L A + + A+ A+E IH YSLIHDDLP+MDN Sbjct: 34 VLEAARYSLFAGGKRLRPILCLAAAEVAGGSREAAMPAACALEMIHTYSLIHDDLPAMDN 93 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H + E A++AG+ LLT AF+ +S + ++ +L G + Sbjct: 94 DDFRRGKPTNHKVFGEAIAVLAGDALLTEAFDFVSKMDGDIPPRKILAVVATLVRASGYR 153 Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ++D+ ++ +D V + KTGAL+ + E GA++ S + L+ +G Sbjct: 154 GMIGGQVIDLECENRTVDLATVEYMHIHKTGALLSASLEVGALLGGGSDAQVSSLKRYGH 213 Query: 216 NLGIIFQLADDLLDCEED 233 +LG+ FQ+ DDLLD E D Sbjct: 214 HLGLAFQITDDLLDVEGD 231 >gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002] gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002] Length = 302 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 85/229 (37%), Positives = 127/229 (55%), Gaps = 12/229 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L LQE ++T LD L+ T + A+RY+LL GGK++R L Sbjct: 13 LAQYLQEQKTIVETALDQSLVIT-------EPVTIYEAMRYSLLAGGKRLRPILCLAACE 65 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + A+ A+E IH SLIHDDLP+MDN +RRGKPT H Y E AI+AG+ L Sbjct: 66 MLGGTAAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDAL 125 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MI 180 L+YAFE ++ + + Q+++ L +G +G++GGQ++D++ E + V I Sbjct: 126 LSYAFEYVARTPDVPAERLL-QVIVRLGQAVGAEGLVGGQVVDLESEGKTDVAVETLNFI 184 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ +GAI+A A E + L + +N+G+ FQ+ DD+LD Sbjct: 185 HTHKTGALLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILD 233 >gi|262039631|ref|ZP_06012924.1| geranyltranstransferase [Leptotrichia goodfellowii F0264] gi|261746346|gb|EEY33892.1| geranyltranstransferase [Leptotrichia goodfellowii F0264] Length = 271 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 121/204 (59%), Gaps = 6/204 (2%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + ++ + L A++YA++ GGK+IR L+ LF + + A+E IHCYSL+HD Sbjct: 4 KYKYPEELSEAMKYAVMNGGKRIRPILMYMICDLFGKKYDKIEDMATALEFIHCYSLVHD 63 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149 DLP+MDN RRGK T H++Y E TAI+ G+ LLT AF +I+ S KT D +++++ Sbjct: 64 DLPAMDNDMYRRGKLTTHVKYGESTAILVGDVLLTEAFNVIAESEKTD--DTAKAKIIAK 121 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L+ G GM+GGQ +DI+ E + + I KTG L+ A E I ++++ Sbjct: 122 LSEYAGFYGMIGGQFMDIKSEHTRVSYDTLKYIHANKTGKLITAAIELPLIALDIEESKR 181 Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231 E+L + E +G FQ+ DD+LD E Sbjct: 182 EKLVGYSELIGTAFQIKDDILDIE 205 >gi|296133204|ref|YP_003640451.1| Polyprenyl synthetase [Thermincola sp. JR] gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR] Length = 299 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 91/231 (39%), Positives = 134/231 (58%), Gaps = 12/231 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 KR I+++ L Q + ++ + + ++RY++L GGK++R LV A + Sbjct: 11 KRKVNIIEEALSQYLPG-EDEYPETIHQSMRYSMLAGGKRLRPVLVLAAAEAVGGDVKKV 69 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + AIE IH YSLIHDDLP+MD+ RRGKPT H+ Y E AI+AG+ LLT AFE++S Sbjct: 70 IPAACAIEMIHTYSLIHDDLPAMDDDNYRRGKPTNHVVYGEAIAILAGDALLTLAFEVLS 129 Query: 133 SPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEFID---ETQVFMIQKMKT 185 S + I Q +L + I G +G++GGQ++DI E +D ET + I KT Sbjct: 130 SLVEE--PGIDPQKVLRVIKEISLAAGSRGLIGGQVVDIGSENLDISAETLKY-IHIHKT 186 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 GAL A ++GAI++ AS+ + L + LG+ FQ+ DD+LD E D K Sbjct: 187 GALFKAALKTGAILSSASEEQITALSRYAHFLGLGFQITDDILDIEGDTEK 237 >gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1] gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1] Length = 324 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 14/201 (6%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV A LR G A+E IH YSL+HDD+P MDN + Sbjct: 63 AMRYAVLDGGKRLRPLLVWAAAEAVGGQAAATLRAGCAVELIHAYSLVHDDMPCMDNDTM 122 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH+Q+ E +A++AG+ L AFE++ + +++++L L G GM Sbjct: 123 RRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQARLCRLLGAAAGSHGMA 182 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC------ 212 GGQ +D+ + + ETQ+ + ++KTGAL+ G+++ A+ N + R Sbjct: 183 GGQAIDLASVGKQLSETQLREMHRLKTGALLL-----GSVLMGAACNAQTDARALAALTD 237 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G+ LG+ FQ+ DD+LD D Sbjct: 238 YGQALGVAFQVVDDILDVVAD 258 >gi|152979039|ref|YP_001344668.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z] gi|150840762|gb|ABR74733.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z] Length = 296 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 91/215 (42%), Positives = 129/215 (60%), Gaps = 14/215 (6%) Query: 29 SHMQTQHND------RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL-RVGAAIE 80 S M+ Q ND L A++Y LL GGK+IR FLV + + L AL AAIE Sbjct: 17 SFMENQFNDINTFGSPLADAMKYGLLLGGKRIRPFLVYATGDMLGAD-LNALDYAAAAIE 75 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT HI +D TAI+AG+ L T+AFEII+ T L Sbjct: 76 SIHAYSLIHDDLPAMDNDELRRGKPTCHIAFDHATAILAGDALQTFAFEIITK-STALCA 134 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAI 198 + +L+ L+ G++GM GQ LD+ + + + ++ +I + KTGAL+ A G I Sbjct: 135 EQKLKLVQELSRAAGVRGMCLGQSLDLLAEQKKVTLAELELIHRNKTGALLTAALMMGFI 194 Query: 199 MA--HASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + +A+ RL+ + + +G+ FQ+ DD+LD E Sbjct: 195 CSPHYANHALACRLKQYADAIGLAFQVRDDILDIE 229 >gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70] gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70] Length = 297 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 80/194 (41%), Positives = 115/194 (59%), Gaps = 4/194 (2%) Query: 42 AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+L GGK+IR L+ F L V AIE IH YSLIHDDLPSMDN + Sbjct: 37 AMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDL 96 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRGKPT H + E AI+AG+GLLTYAF++I+ ++ + +L+ L G +GM Sbjct: 97 RRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEMSDARIVPATKIRLIEELAKAAGPEGM 156 Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 + GQ+ DI+ E + Q+ I + KTG ++ ++ +GA++A A + L F +L Sbjct: 157 VAGQVADIEGEGKQLSLEQLEYIHRHKTGKMLQYSVLAGALLADAKDEQLHHLHTFASHL 216 Query: 218 GIIFQLADDLLDCE 231 G+ FQ+ DD+LD E Sbjct: 217 GLAFQIRDDILDIE 230 >gi|264679659|ref|YP_003279566.1| polyprenyl synthetase [Comamonas testosteroni CNB-2] gi|262210172|gb|ACY34270.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2] Length = 324 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 14/201 (6%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV A LR G A+E IH YSL+HDD+P MDN + Sbjct: 63 AMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTM 122 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH+Q+ E +A++AG+ L AFE++ + +++++L L G QGM Sbjct: 123 RRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMA 182 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC------ 212 GGQ +D+ + + E Q+ + ++KTGAL+ G+++ A+ N + R Sbjct: 183 GGQAIDLASVGKHLSEAQLREMHRLKTGALLL-----GSVLMGAACNAQTDARALAALTD 237 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G+ LG+ FQ+ DD+LD D Sbjct: 238 YGQALGVAFQVVDDILDVVAD 258 >gi|119383153|ref|YP_914209.1| polyprenyl synthetase [Paracoccus denitrificans PD1222] gi|119372920|gb|ABL68513.1| farnesyl-diphosphate synthase [Paracoccus denitrificans PD1222] Length = 287 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 87/206 (42%), Positives = 128/206 (62%), Gaps = 11/206 (5%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 L A+RYA +GGK+IR+FLV E A LF + +L V AA+E +H YSL+HDDLPSMD+ Sbjct: 28 LTDAMRYACIGGKRIRAFLVMESARLFGLRDRESLPVAAAVEALHAYSLVHDDLPSMDDD 87 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG PTVH+++ E TAI+AG+ L + AF +++ + + IR L+ + +G +G Sbjct: 88 DLRRGLPTVHVRWSEATAILAGDALQSLAFGLLTDAQIGAPE-IRLALVSGFSEAVGGRG 146 Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M+ GQ LDI E +D + +Q+ KTGAL+ F+ +GA+MA + L + Sbjct: 147 MVWGQALDIAAETAVEPLDLMAIKRLQQAKTGALIQFSATAGAVMAG---QDTGPLAEYA 203 Query: 215 ENLGIIFQLADDLLDC---EEDLPKK 237 NLG+ FQ+ DD+LD E D K+ Sbjct: 204 RNLGLAFQIHDDVLDVTGNEADTGKR 229 >gi|84514696|ref|ZP_01002060.1| geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis SKA53] gi|84511747|gb|EAQ08200.1| geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis SKA53] Length = 294 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 100/226 (44%), Positives = 129/226 (57%), Gaps = 18/226 (7%) Query: 20 LDDLLLQTASHMQTQHNDRLLS--------AIRYALLGGKKIRSFLVTECASLFNVNHLT 71 L D L Q A+ + TQ + LS A+ YA GGK +R+FL E A L V Sbjct: 10 LPDALAQ-AARIATQMIEAQLSDLSGPVPDAMIYAARGGKALRAFLAIETARLHGVPPQV 68 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A AAIECIH YSLIHDDLP MD+ +RRG+PTVH ++DE TA++AG+ L AFE++ Sbjct: 69 AAHAAAAIECIHAYSLIHDDLPCMDDDDLRRGQPTVHKRWDEATAVLAGDALQALAFELL 128 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGA 187 + D + L LSL G++GM+GGQ DI E D Q+ +Q KTGA Sbjct: 129 G--RLDCADAAKLDLTLSLAQAAGVRGMVGGQAADIAAETADVPLTLDQIIALQAGKTGA 186 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 LM +A G MA A Q LR +G+ LG+ FQ+ADD+LD D Sbjct: 187 LMSWAALVGPRMALADQAA---LRLYGDCLGLAFQIADDVLDVTGD 229 >gi|310658649|ref|YP_003936370.1| geranyltranstransferase [Clostridium sticklandii DSM 519] gi|308825427|emb|CBH21465.1| geranyltranstransferase [Clostridium sticklandii] Length = 295 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 8/219 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 ++ +D+LL + + +L+ +++Y++ GGK++R L E L N N + Sbjct: 14 VEKYMDELL-----SINVIYEKKLIESMKYSVQAGGKRLRPILFLETIKLLNKNPFDFIE 68 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E TAI+AG+GLL A EI+ + Sbjct: 69 IACAIEMIHTYSLIHDDLPAMDNDSLRRGKPTNHVVFGEATAILAGDGLLNLAHEIMIAF 128 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFA 192 ++ + ++ G+ GM+ GQ +DI+ E ID + I KTGAL+ + Sbjct: 129 VSKKLTKNNINGINIISKAAGINGMIAGQAVDIESEGKSIDIDTMKFIHSNKTGALIEAS 188 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + A+M+ A L+ + + +G+ FQ+ DD+LD E Sbjct: 189 IVAAAVMSDADDTRIAALKTYAKYIGLAFQITDDILDIE 227 >gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa] gi|1345836|sp|P48368|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog; Short=GGPP synthase; AltName: Full=Farnesyltranstransferase gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa] Length = 300 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 82/205 (40%), Positives = 119/205 (58%), Gaps = 7/205 (3%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + +IRY+L GGK+IR L L AL A+E IH SLIHDDLP+MDN Sbjct: 37 IYDSIRYSLSAGGKRIRPILCLASCELAGGTMEMALPTACALEMIHTMSLIHDDLPAMDN 96 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT HI Y E AI+AG+ LL YAFE I++ + ++ +++ + H++ Sbjct: 97 DSYRRGKPTNHIIYGEDLAILAGDALLAYAFEFIATQTKNVPADLIVKVIAQVAHSVTTS 156 Query: 158 GMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G++GGQ++D+ E +T + I KTGAL+ A SGA++A A + + R + Sbjct: 157 GLVGGQIIDLSSEGKSDTTLETLNFIHIHKTGALLEAAVLSGALLAGAKEKDMNRFLRYA 216 Query: 215 ENLGIIFQLADDLLD---CEEDLPK 236 +N+G+ FQ+ DD+LD EE L K Sbjct: 217 QNIGLAFQIIDDVLDIISTEEKLGK 241 >gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus] Length = 319 Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 117/198 (59%), Gaps = 4/198 (2%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+ Y+L GGK+IR L+ + L V AIE IH YSLIHDDLPSMD Sbjct: 33 KLKKAMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIG 155 N +RRGKPT H + E AI+AG+GLLTYAF+ I+ ++ ++R +L+ L G Sbjct: 93 NDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLIVEIDDERIPPSVRLRLIERLAKAAG 152 Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +GM+ GQ D++ E + +++ I + KTG ++ ++ +GA++ A + L F Sbjct: 153 PEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVHAGALIGGADARQTRELDEF 212 Query: 214 GENLGIIFQLADDLLDCE 231 +LG+ FQ+ DD+LD E Sbjct: 213 AAHLGLAFQIRDDILDIE 230 >gi|88607928|ref|YP_504938.1| geranyltranstransferase [Anaplasma phagocytophilum HZ] gi|88598991|gb|ABD44461.1| geranyltranstransferase [Anaplasma phagocytophilum HZ] Length = 280 Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 81/196 (41%), Positives = 113/196 (57%), Gaps = 3/196 (1%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ AI Y +L GK +R+FL + A F V+ L + AIE +H YSL+HDDLPSMDN Sbjct: 37 LVDAIGYCILPPGKCLRAFLASSVAQTFGVSIERTLPLCLAIEVLHSYSLVHDDLPSMDN 96 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK + HI++ E A++ G+ LLT FE++SS ++ ++ ++ G + Sbjct: 97 APTRRGKNSCHIEHGEALALLTGDALLTLTFELLSSMDESC--TVKCAIIRVISDACGHR 154 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GM+ GQ LD+ + V I K+KT L ACESGAI+A S ++ L +GE L Sbjct: 155 GMVAGQALDMGNLEPSLEAVKQIHKLKTARLFSAACESGAILAEVSTANQQALASYGETL 214 Query: 218 GIIFQLADDLLDCEED 233 G FQ DDL D ED Sbjct: 215 GCAFQAKDDLCDINED 230 >gi|313884672|ref|ZP_07818428.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8] gi|312620040|gb|EFR31473.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8] Length = 300 Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 77/189 (40%), Positives = 116/189 (61%), Gaps = 12/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R +V +F +L L A+E IH YSLIHDDLP+MDN +RRG+PT Sbjct: 41 GGKRLRPLMVLLVIDIFEQANLKDGLSTAFALEYIHTYSLIHDDLPAMDNDDLRRGQPTN 100 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H+Q+DE TAI+AG+ LLT AF +I+ + +LK R +L+ L+ + G GM+ GQ+ DI Sbjct: 101 HVQFDEATAILAGDALLTDAFALIAQ-EAKLKPRQRLKLIELLSRSAGSTGMVAGQLFDI 159 Query: 168 QDEFIDETQVFMIQ------KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + E Q I+ ++KTG L +AC++GAI++ AS E + + F + G+ + Sbjct: 160 R----AENQTLTIEALKNIHRLKTGRLFSYACQAGAIISDASDKELKLIDEFAQAFGLAY 215 Query: 222 QLADDLLDC 230 Q+ +DL D Sbjct: 216 QIHNDLQDV 224 >gi|304395483|ref|ZP_07377366.1| Polyprenyl synthetase [Pantoea sp. aB] gi|304356777|gb|EFM21141.1| Polyprenyl synthetase [Pantoea sp. aB] Length = 299 Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 118/200 (59%), Gaps = 5/200 (2%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++A+ Y ALLGGK++R FLV + + + + AA+ECIH YSLIHDDLP+MD+ Sbjct: 32 LVNAMHYGALLGGKRLRPFLVYATGEMLHADPASLDAPAAAVECIHAYSLIHDDLPAMDD 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI+Y E TAI+AG+ L T AF I++ + R ++ L G+ Sbjct: 92 DALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADEAMPGVSAEYRLMMLSELAKASGV 151 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213 GM GGQ LD+ E +D Q+ I + KTGAL+ A GA+ A A + L + Sbjct: 152 AGMCGGQALDLAAEGKSVDLDQLEQIHRHKTGALIRSAVRLGALTAGDAGREALPLLDRY 211 Query: 214 GENLGIIFQLADDLLDCEED 233 E +G+ FQ+ DD+LD D Sbjct: 212 AEAIGLAFQVQDDILDVVGD 231 >gi|117618681|ref|YP_857809.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560088|gb|ABK37036.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 296 Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 119/204 (58%), Gaps = 11/204 (5%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RY LL GGK++R FLV + V + AA+ECIH YSL+HDDLP+MD Sbjct: 31 RLRDAMRYGLLLGGKRVRPFLVYAVGEMLGVKNELLDGPAAAVECIHAYSLLHDDLPAMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLS-LTH 152 N +RRG+PTVH +DE TAI+AG+ L T AF I++ P + L + +R MLS L Sbjct: 91 NDDLRRGQPTVHKAFDEGTAILAGDALQTLAFTILADHPMPDSLLANRVR---MLSRLAR 147 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKER 209 G GM GGQ LD+Q E I ++ + + KTGAL+ A GA+ A + Sbjct: 148 ASGYLGMCGGQALDLQAEGRQISIAELEQVHRHKTGALIECAVALGALCKADVDETTLSA 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L+ + +G+ FQ+ DD+LD D Sbjct: 208 LQTYAAAIGLAFQVQDDILDITGD 231 >gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106] gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106] Length = 287 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 7/209 (3%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + +++ A+RY+LL GGK++R L L A+ ++E IH SLIHDDLP Sbjct: 20 YPEKIYEAMRYSLLAGGKRLRPILCLATCELAGGTMEMAMPTACSLEMIHTMSLIHDDLP 79 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Y E AI+AG+GLL+YAFE +++ T + ++ L Sbjct: 80 AMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVATQTTNVPPQQVLDVIGHLGRA 139 Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +G G++GGQ++D++ E I E Q+ I KTGAL+ SGAI+A S +ERL Sbjct: 140 VGAAGLVGGQVVDVESEGKTDITEEQLTFIHTHKTGALLEACVVSGAILAGTSTENRERL 199 Query: 211 RCFGENLGIIFQLADDLLD---CEEDLPK 236 + + +G+ FQ+ DD+LD +E+L K Sbjct: 200 SRYAQKIGLAFQIVDDILDITATQEELGK 228 >gi|239814577|ref|YP_002943487.1| polyprenyl synthetase [Variovorax paradoxus S110] gi|239801154|gb|ACS18221.1| Polyprenyl synthetase [Variovorax paradoxus S110] Length = 305 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 82/196 (41%), Positives = 117/196 (59%), Gaps = 4/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV + N ALR A E IH YSL+HDDLPSMDN + Sbjct: 44 AMRYAVLDGGKRLRPLLVLAASEAVGGNAAAALRAACATELIHAYSLVHDDLPSMDNDVL 103 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH+++ E A++AG+ L AFE+++ ++ +I++ L L G QGM Sbjct: 104 RRGKPTVHVKFGEADALLAGDALQALAFELLTPEGDEIPASIQAALCRLLARAAGSQGMA 163 Query: 161 GGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENL 217 GGQ +D+ +DE Q+ + ++KTGAL+ + E GA A A LR +G + Sbjct: 164 GGQAIDLASVGLALDEAQLREMHRLKTGALLQGSVEMGAACAGAVAPAALSALRDYGAAI 223 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LD D Sbjct: 224 GLAFQVVDDILDVTAD 239 >gi|325569748|ref|ZP_08145772.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755] gi|325157053|gb|EGC69219.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755] Length = 298 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 78/199 (39%), Positives = 123/199 (61%), Gaps = 6/199 (3%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLP 93 + RL +++Y++ GGK+IR L+ + F+ TA+ + AA+E +H YSLIHDDLP Sbjct: 29 DQRLFKSMQYSIQAGGKRIRPLLLAATVAAFHKPVNTAVYQCAAALEMVHTYSLIHDDLP 88 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN +RRGKPT H + E AI+AG+GLLT AF++++ +++ N + L+ L+ Sbjct: 89 AMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVA--MAEIEANQKVLLLQQLSKA 146 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQ DIQ E + ++ I + KTG L+ FA +G ++A ++ L Sbjct: 147 AGTQGMVAGQAADIQGENQALSLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELD 206 Query: 212 CFGENLGIIFQLADDLLDC 230 F +++G+ FQ+ DDLLD Sbjct: 207 RFAQHIGLAFQIRDDLLDA 225 >gi|113971065|ref|YP_734858.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4] gi|113885749|gb|ABI39801.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4] Length = 293 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 84/186 (45%), Positives = 115/186 (61%), Gaps = 2/186 (1%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 ALLGGK+IR FLV +F V AAIECIH YSLIHDDLP+MD+ +RRG+P Sbjct: 39 ALLGGKRIRPFLVYSVGQMFGVPLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQP 98 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVHI +DE TAI+AG+ L T AFEI++ T + ++ +L G +GM GGQ + Sbjct: 99 TVHIAFDEATAILAGDALQTLAFEIVTEAVTGISSEQHIAMVRALAKASGYRGMCGGQAI 158 Query: 166 DIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D+ D+ ID + + MKTGAL+ A E I A+A ++E + + F +G+ FQ+ Sbjct: 159 DLASTDKLIDLKALTQLHNMKTGALISCAVELALIAANAPKDEYQTMIEFAHAVGLAFQV 218 Query: 224 ADDLLD 229 DD+LD Sbjct: 219 QDDILD 224 >gi|329888094|ref|ZP_08266692.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC 11568] gi|328846650|gb|EGF96212.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC 11568] Length = 303 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 86/195 (44%), Positives = 120/195 (61%), Gaps = 1/195 (0%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA LG GK++R F E + V ALR A+EC+H YSL+HDDLP+MD Sbjct: 41 RLTEAMRYAALGPGKRLRPFFAIEAGRMLEVEERAALRAACALECVHAYSLVHDDLPAMD 100 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PT+HI YDE TAI+AG+ L T AF+II T +R +L L+ G Sbjct: 101 DDDVRRGRPTLHIAYDEATAILAGDALQTAAFDIILDEDTHDDAVVRCELARRLSFASGA 160 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 +GM GGQM+D+ D V +Q++KTGAL +A E I+A A++ L F + Sbjct: 161 RGMAGGQMIDLMGVRDDLGGVARMQRLKTGALFAYAFEIPLIIADANEAAWHALTSFAHD 220 Query: 217 LGIIFQLADDLLDCE 231 +G+ +Q+ DD+LD E Sbjct: 221 IGLAYQIVDDVLDAE 235 >gi|114048295|ref|YP_738845.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7] gi|113889737|gb|ABI43788.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7] Length = 293 Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 2/212 (0%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +DD L Q S ++ + ALLGGK+IR FLV +F V+ AAI Sbjct: 13 VDDQLKQRFSTLEDTAAQLKAAMTHGALLGGKRIRPFLVYSVGQMFGVSLEKLDACAAAI 72 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 ECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFEI++ + Sbjct: 73 ECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGIS 132 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ +L G +GM GGQ +D+ D+ ID + + MKTGAL+ A E Sbjct: 133 SEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLHNMKTGALISCAVELAL 192 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I A+A ++E + + F +G+ FQ+ DD+LD Sbjct: 193 IAANAPKDEYQTMMEFAHAVGLAFQVQDDILD 224 >gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563] gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563] Length = 294 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 124/200 (62%), Gaps = 6/200 (3%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + + ++Y L GGK++R L LF ++ A+ ++E IH YSL+HDDLP+M Sbjct: 31 NSFIEMLKYPLDAGGKRLRPVLTLLACELFEGDYKKAVIPAVSLELIHTYSLVHDDLPAM 90 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRGKPT H++Y E AI+ G+GLLT+AF+++S K +KD+ +L+ L++ G Sbjct: 91 DNDDLRRGKPTTHVKYGEANAILVGDGLLTHAFQLLS--KADVKDSTLRKLLFELSYAAG 148 Query: 156 LQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GM+ GQ +D+ +++ I+ + ++ KT A++ A GAI + + N+ E + + Sbjct: 149 INGMVMGQFIDLYYEEKEINFDMLKVLHAKKTAAMIRGAVRLGAISSE-NDNDIENITKY 207 Query: 214 GENLGIIFQLADDLLDCEED 233 GE +G+ FQ+ DD+LD D Sbjct: 208 GEAIGLAFQIQDDILDVISD 227 >gi|190150135|ref|YP_001968660.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263471|ref|ZP_07545086.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915266|gb|ACE61518.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871114|gb|EFN02843.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 297 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 125/201 (62%), Gaps = 6/201 (2%) Query: 35 HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 ++ L+ A+ YA LLGGK++R FL+ + +V AA+E IH YSL+HDDLP Sbjct: 30 YDSALIEAMSYAVLLGGKRVRPFLIYATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLP 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT HI +DE TAI+AG+ L ++AFE+I+ ++ L D+ + + + SL Sbjct: 90 AMDDDKLRRGKPTCHIAFDEATAILAGDALQSFAFELIAQDES-LTDSQKVRQIQSLAQA 148 Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KER 209 G +GM GQ LD+ +D ++ ++ +I + KT AL+ + G ++ SQN K+ Sbjct: 149 AGARGMCLGQSLDLLAEDTAVNLAELELIHRNKTSALIIASVLMGFNLSAHSQNLAIKQP 208 Query: 210 LRCFGENLGIIFQLADDLLDC 230 L + + +G+ FQ+ DD+LD Sbjct: 209 LERYAQAIGLAFQVQDDILDV 229 >gi|238795560|ref|ZP_04639075.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969] gi|238720679|gb|EEQ12480.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969] Length = 306 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 82/200 (41%), Positives = 119/200 (59%), Gaps = 13/200 (6%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+RY A+LGGK++R +LV +F ++ + AAIECIH YSLIHDDLP+MDN Sbjct: 39 LVEAMRYGAVLGGKRLRPYLVYATGQMFGLSLVNLDAPAAAIECIHAYSLIHDDLPAMDN 98 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT H+++ E AI+AG+ L T AF I++ + + D R ++ L G+ Sbjct: 99 DDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEADMSDVADKDRLAMVAELARASGV 158 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209 GM GGQ LD++ E I + I + KTGAL+ A GA+ A E+ R Sbjct: 159 AGMCGGQALDLEAEARQISLADLEQIHRHKTGALIRAAVRLGALAA----GERGRAALPF 214 Query: 210 LRCFGENLGIIFQLADDLLD 229 L + E +G+ FQ+ DD+LD Sbjct: 215 LDRYAEAIGLAFQVQDDILD 234 >gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44] gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44] Length = 313 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 14/201 (6%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV A LR G A+E IH YSL+HDD+P MDN + Sbjct: 52 AMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTM 111 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH+Q+ E +A++AG+ L AFE++ + +++++L L G QGM Sbjct: 112 RRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMA 171 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC------ 212 GGQ +D+ + + E Q+ + ++KTGAL+ G+++ A+ N + R Sbjct: 172 GGQAIDLASVGKQLSEAQLREMHRLKTGALLL-----GSVLMGAACNAQTDARALAALTD 226 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G+ LG+ FQ+ DD+LD D Sbjct: 227 YGQALGVAFQVVDDILDVVAD 247 >gi|89052580|ref|YP_508031.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1] gi|88862129|gb|ABD53006.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1] Length = 288 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 82/205 (40%), Positives = 119/205 (58%), Gaps = 8/205 (3%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +D + +RYA GGK++R FL E A+LF+V AL A+EC+H YSL+HDDLP M Sbjct: 26 DDTIAQGMRYATGGGKRLRGFLALESAALFDVPPGQALYAAGAVECLHAYSLVHDDLPCM 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRG+PTVH ++D+ TA++ G+ L T+AFE+IS + R L SL G Sbjct: 86 DDDDLRRGQPTVHKKWDDATAVLVGDALQTFAFELISREDAGTAEE-RVALTASLAKASG 144 Query: 156 LQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 QGM+ GQ DI E ++ +Q KTG L+ + +GA++ A +R Sbjct: 145 AQGMVLGQAQDIAAETAGRALTLQEITGLQANKTGRLIEWPAHAGAVLGGADPAPLQR-- 202 Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236 + +G+ FQ+ADD+LD E D K Sbjct: 203 -YARAIGLAFQIADDILDVEGDAAK 226 >gi|262274770|ref|ZP_06052581.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] gi|262221333|gb|EEY72647.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] Length = 310 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 93/247 (37%), Positives = 130/247 (52%), Gaps = 25/247 (10%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRL--------------LSAIRY-ALLGGKKI 53 L N +I + D L T H QT++ND+L + A+++ ALLGGK++ Sbjct: 2 LPWNLLKIRAMSDTALTSTLLHYQTRNNDKLAYWLASLGHQEQPLIQAMKHGALLGGKRV 61 Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113 R FL LF AA+ECIH YSLIHDDLP+MDN +RRG+PT H+ +DE Sbjct: 62 RPFLTYMTGKLFGAPDEALDTPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHVAFDE 121 Query: 114 VTAIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 +AI+AG+ L T AF I++ SP+ + R Q++ L G GM GQ LD+ Sbjct: 122 ASAILAGDALQTLAFTILAEGDLSPEGE---AYRIQMVKELAAASGAAGMCLGQALDLSA 178 Query: 170 EF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADD 226 E +D + I + KTGAL+ A GA+ A +L F +G+ FQ+ DD Sbjct: 179 EGKKVDVDTLETIHRNKTGALIRCAVRLGALAAGKKGATYLSQLDTFSNAIGLAFQVQDD 238 Query: 227 LLDCEED 233 +LD D Sbjct: 239 ILDIISD 245 >gi|332534969|ref|ZP_08410787.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332035587|gb|EGI72079.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 295 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/197 (43%), Positives = 122/197 (61%), Gaps = 4/197 (2%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +A +Y L GGK++R FLV + N + AAIECIH YSL+HDDLP+MD+ Sbjct: 34 NATQYGLFNGGKRLRPFLVYATGKMLGANQQDLHVLAAAIECIHSYSLVHDDLPAMDDDD 93 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+PT HI++ E AI+AG+ L T AFE+I++ K + +++ +L H GL+GM Sbjct: 94 LRRGRPTCHIEFGEANAILAGDALQTLAFELIANHKFTCSSQTQVKMIATLAHASGLEGM 153 Query: 160 LGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGEN 216 +GGQ LDI D+ I ++ I K+KTGAL+ A GA+ + A Q E L FG Sbjct: 154 VGGQGLDIAATDKVITVQELARIHKLKTGALINCAITLGALCSEKADQQTLENLSIFGYA 213 Query: 217 LGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD E D Sbjct: 214 IGLAFQVHDDILDVEGD 230 >gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem] gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem] Length = 295 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 117/197 (59%), Gaps = 4/197 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L ++RY++ GGK++R L+ +AL A+E IH YSLIHDDLP+MDN Sbjct: 32 LHGSMRYSVFAGGKRVRPVLLLAACEAVGGELNSALPAACAMEMIHTYSLIHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG PT H Y E TAI+AG+ LLT AF ++S ++ R +++ + H G + Sbjct: 92 DDFRRGNPTNHKVYGEATAILAGDALLTEAFILLSCNGEGMEPGARLRVIHEIAHASGSR 151 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQM+D++ E ID + I KTGAL+ + +GAI+ A++ + L + Sbjct: 152 GMVGGQMVDMESEGKHDIDMATLSYIHTHKTGALIRASVRAGAILGGANEETFDALTRYA 211 Query: 215 ENLGIIFQLADDLLDCE 231 + +G+ FQ+ADD+LD E Sbjct: 212 DAIGLAFQIADDVLDVE 228 >gi|229828869|ref|ZP_04454938.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM 14600] gi|229792032|gb|EEP28146.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM 14600] Length = 305 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 83/232 (35%), Positives = 136/232 (58%), Gaps = 11/232 (4%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66 +L+E + + I+ L + + +T ++ A+ YAL+ GK++R L+ ECA+ F+ Sbjct: 14 ELEERTLEAEGIIRRFLPREEGYQKT-----IMEAMSYALMSPGKRLRPILMRECAACFD 68 Query: 67 VNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 AL AAIE IH YSL+HDDLP+MDN +RRGKPT H ++ E ++AG+ LL Sbjct: 69 QTSPQALPFFMAAIEMIHAYSLVHDDLPAMDNDLLRRGKPTTHARFGEAMGVLAGDALLN 128 Query: 126 YAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQ 181 YAFE + S +T + + ++ L G+ GM+GGQ++D++ E I D+ ++ I Sbjct: 129 YAFETALQSLETDGTNPAVHKSLILLARKAGIYGMIGGQVVDVESEHIQGMDKHRLDFIH 188 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++KTGAL+ A GA++ A +++ + +G+ FQ+ DD+LD D Sbjct: 189 ELKTGALIEAAMCIGALLGGADESQLLTVEQAAAKIGLAFQIEDDILDITGD 240 >gi|322514115|ref|ZP_08067184.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976] gi|322120026|gb|EFX92005.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976] Length = 297 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 85/235 (36%), Positives = 135/235 (57%), Gaps = 11/235 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M+ L + L +RI+ L T + L+ A+ YA LLGGK++R FL+ Sbjct: 1 MSYSLSTDLTAIQQRIND-----FLATKLQAHQAYGSPLIDAMSYAVLLGGKRVRPFLIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + V+ AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A Sbjct: 56 ATGRMLGVSLEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDETTAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177 G+ L ++AFE+I+ ++ L D+ + + +L G +GM GQ LD+ +D+ ++ ++ Sbjct: 116 GDALQSFAFELIAQDES-LTDSQKVWQIQALAQAAGARGMCLGQSLDLLAEDKAVNLAEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDC 230 +I + KTGAL+ + G + SQN K+ L + + +G+ FQ+ DD+LD Sbjct: 175 ELIHRNKTGALIVASVLMGFNSSAHSQNLAVKQPLERYAQAIGLAFQVQDDILDV 229 >gi|282876057|ref|ZP_06284924.1| geranyltranstransferase [Staphylococcus epidermidis SK135] gi|281295082|gb|EFA87609.1| geranyltranstransferase [Staphylococcus epidermidis SK135] Length = 298 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +++Y+L GGK+IR ++ + N ++ L A+E IH YSLIHDDLP+MDN Sbjct: 35 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK T H Y E AI+AG+ LLT AFE++S+ T ++D+++ ++ L+ G Sbjct: 95 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSND-TTIEDSVKVSIIKRLSKASGHW 153 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD++ E I + I + KTGAL+ F+ + +A QN + L F Sbjct: 154 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 213 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLD D K Sbjct: 214 HLGMMFQIKDDLLDVYGDESK 234 >gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2] gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2] Length = 296 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 80/186 (43%), Positives = 110/186 (59%), Gaps = 3/186 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L+ + F + L AAIE +H YSLIHDDLPSMDN +RRGKPT H Sbjct: 44 GGKRIRPMLLFASLAAFGEDTSKGLWTAAAIEMVHTYSLIHDDLPSMDNDDLRRGKPTNH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + E AI+AG+ LLTY+F+ I+ +P + L+ L+ G +GM+GGQ DI Sbjct: 104 KVFGEAFAILAGDALLTYSFQTIAETPDEFASAETKLSLIKELSKASGAEGMVGGQAADI 163 Query: 168 QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + E + + I KTG L+ + SGAI+A+ASQ + L F +LG+ FQ+ D Sbjct: 164 KGEGKQLGLEDLEYIHVHKTGKLLECSVVSGAILANASQETIQALSKFAYHLGLAFQIRD 223 Query: 226 DLLDCE 231 D+LD E Sbjct: 224 DILDLE 229 >gi|27468120|ref|NP_764757.1| geranyltranstransferase [Staphylococcus epidermidis ATCC 12228] gi|251810934|ref|ZP_04825407.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060] gi|27315666|gb|AAO04801.1|AE016748_35 geranyltranstransferase [Staphylococcus epidermidis ATCC 12228] gi|251805614|gb|EES58271.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060] Length = 293 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +++Y+L GGK+IR ++ + N ++ L A+E IH YSLIHDDLP+MDN Sbjct: 30 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK T H Y E AI+AG+ LLT AFE++S+ T ++D+++ ++ L+ G Sbjct: 90 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSND-TTIEDSVKVSIIKRLSKASGHW 148 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD++ E I + I + KTGAL+ F+ + +A QN + L F Sbjct: 149 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 208 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLD D K Sbjct: 209 HLGMMFQIKDDLLDVYGDESK 229 >gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB] gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB] Length = 297 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 119/202 (58%), Gaps = 15/202 (7%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA LGG K++R L L VG A+E IH YSL+HDDLP MD Sbjct: 34 RLHEAMRYATLGGGKRVRPLLAHAAGELTGATPEALDIVGCAVEMIHAYSLVHDDLPCMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-----PKTQLKDNIRSQLMLSLT 151 + +RRG+PT H+++DE TA++ G+ L T AFE+++S PK QL +++ L Sbjct: 94 DDVLRRGRPTCHVEFDEPTALLVGDSLQTMAFELLASQPLGEPKQQL------EIIALLA 147 Query: 152 HNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKE 208 H G +GM GGQ +D+ + + + ++ ++ +KTGAL+ A GA+ S +E+ Sbjct: 148 HASGSRGMAGGQAIDLASVGKPLTQPELELMHALKTGALIRAAVLLGALAGQPLSADERT 207 Query: 209 RLRCFGENLGIIFQLADDLLDC 230 L F + G++FQ+ DD+LDC Sbjct: 208 SLDRFAKRAGLLFQVVDDILDC 229 >gi|289663219|ref|ZP_06484800.1| polyprenyl synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668286|ref|ZP_06489361.1| polyprenyl synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 291 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/204 (42%), Positives = 124/204 (60%), Gaps = 9/204 (4%) Query: 33 TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T RL +A+RYA+LGG K++R LV +LF A+E IH YSL+HDD Sbjct: 25 THAPQRLHAAMRYAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDD 84 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ T + +R M SL Sbjct: 85 LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAAASTSAE--LRVGWMQSLA 142 Query: 152 HNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 G GM GGQ LD+ Q + + + Q + +KTGAL+ A GA+ A+ +++ Sbjct: 143 TAAGAAGMCGGQALDMDATGQLQPLQDLQ--RMHALKTGALIRAAVRMGALTGGAAADDQ 200 Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231 +RL F + LG+ FQ+ DD+LD E Sbjct: 201 QRLGAFADALGLAFQVRDDILDVE 224 >gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies] gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis] Length = 382 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 124/205 (60%), Gaps = 7/205 (3%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 +Q ++ +++ A+RY+LL GGK++R L L A+ A+E IH SLIH Sbjct: 109 VQLRYPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGTEKLAMPTACAMEMIHTMSLIH 168 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLM 147 DDLP MDN RRGKPT H + E TA++AG+ LL++AFE +S+ K+ D I +++ Sbjct: 169 DDLPCMDNDDFRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKSVGSDRIL-RVV 227 Query: 148 LSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 L IG QG++GGQ+ DI E +D + I KT L+ + GAI++ AS+ Sbjct: 228 SELGRTIGSQGLVGGQVADITSEGNASVDLDTLEWIHIHKTAVLLECSVVCGAIISGASE 287 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 NE ER++ + ++G++FQ+ DD+LD Sbjct: 288 NEIERVKRYARSVGLLFQVVDDILD 312 >gi|253990912|ref|YP_003042268.1| Geranyltranstransferase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782362|emb|CAQ85526.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP synthase [Photorhabdus asymbiotica] Length = 305 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 92/232 (39%), Positives = 138/232 (59%), Gaps = 14/232 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF- 65 + ++ K ++ +L+ T S + T N L+ A+++ ALLGGK++R FLV +F Sbjct: 8 QFEQQLKTYQQRVNKVLISTLSSL-TFPNSPLVRAMQHGALLGGKRLRPFLVYAVGEMFG 66 Query: 66 -NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + N+L A AA+ECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG+ L Sbjct: 67 LSANNLDA--PAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAGDALQ 124 Query: 125 TYAFEIISSPKTQLKDNI---RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179 AFEI+S K ++ D R +++ L G+ GM GGQ LD++ E ID + Sbjct: 125 ALAFEILS--KREMPDVTTANRLEMLAELATASGIAGMCGGQSLDLEAEGKHIDLQALEQ 182 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDC 230 I + KTGAL+ A + GA A S ++ L + + +G+ FQ+ DD+LD Sbjct: 183 IHRHKTGALIRCAVKMGAYGAGQSGHDVLPELDQYAQAIGLAFQVQDDILDV 234 >gi|329737240|gb|EGG73494.1| geranyltranstransferase [Staphylococcus epidermidis VCU028] Length = 288 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +++Y+L GGK+IR ++ + N ++ L A+E IH YSLIHDDLP+MDN Sbjct: 25 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK T H Y E AI+AG+ LLT AFE++S+ T ++D+++ ++ L+ G Sbjct: 85 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSND-TTIEDSVKVSIIKRLSKASGHW 143 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD++ E I + I + KTGAL+ F+ + +A QN + L F Sbjct: 144 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 203 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLD D K Sbjct: 204 HLGMMFQIKDDLLDVYGDESK 224 >gi|326201956|ref|ZP_08191826.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] gi|325987751|gb|EGD48577.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] Length = 294 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 80/195 (41%), Positives = 119/195 (61%), Gaps = 7/195 (3%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+LL GGK++R L A + + + G AIE IH YSLIHDDLP+MDN Sbjct: 35 AMSYSLLAGGKRLRPLLALAVAEMLDKPFDEVINFGCAIEMIHTYSLIHDDLPAMDNDDY 94 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQG 158 RRGKPT H + E AI+AG+GLL A+EI+ + + K D +R+ +++ G G Sbjct: 95 RRGKPTNHKVFGEAMAILAGDGLLNMAYEIMINDAVESKSIDKMRAAGIVA--KYAGSLG 152 Query: 159 MLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 M+GGQ++D+Q E I+ ++ + ++KTGAL+ E+ A++ A + E E L + N Sbjct: 153 MVGGQVIDLQSEGKTIESDRLKTMHRLKTGALIKAPVEAAAVICGADKKEFELLSGYAAN 212 Query: 217 LGIIFQLADDLLDCE 231 LG+ FQ+ DD+LD E Sbjct: 213 LGLAFQIKDDILDIE 227 >gi|8272414|dbj|BAA96459.1| farnesyl diphosphate synthase [Rhodovulum sulfidophilum] Length = 289 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 92/234 (39%), Positives = 141/234 (60%), Gaps = 14/234 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 S L+ ++RI+T L + L A TQ A+RYA+ GGK++R FLV E A+L++ Sbjct: 4 SSLKSAAERIETRLTEALAGAADQPVTQ-------AMRYAVSGGKRLRGFLVLESAALYD 56 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A+ AA+E +H YSL+HDD+P MD+ +RRG+PTVH+++D+ TA++ G+ L T Sbjct: 57 IAPEAAVDAAAAVEALHAYSLVHDDMPCMDDDDLRRGQPTVHVKWDDGTALLTGDALQTL 116 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQK 182 AFE++S+P +R L+ SL G+ GM+ GQ DI E + ++ +Q Sbjct: 117 AFELLSAPACHPDPAVRIDLVASLARASGIDGMVLGQAQDIAAETAGRSLTLDEITELQA 176 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTGAL+ ++ E+GA +A A + L + LG+ FQ+ADD+LD E D K Sbjct: 177 NKTGALIRWSAEAGARLARA---DIAPLTAYSTALGLAFQIADDILDVEGDAAK 227 >gi|117921341|ref|YP_870533.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3] gi|117613673|gb|ABK49127.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3] Length = 293 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 123/212 (58%), Gaps = 2/212 (0%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +DD L Q S ++ + ALLGGK+IR FLV +F V AAI Sbjct: 13 VDDQLKQRFSTLEDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGVPLEKLDASAAAI 72 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 ECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFEI++ + Sbjct: 73 ECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGIS 132 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ +L G +GM GGQ +D+ D+ ID + + MKTGAL+ A E Sbjct: 133 SEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLHNMKTGALISCAVELAL 192 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I A+A ++E + + F +G+ FQ+ DD+LD Sbjct: 193 IAANAPKDEYQTMMEFAHAVGLAFQVQDDILD 224 >gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii] gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii] Length = 326 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 119/214 (55%), Gaps = 5/214 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D L S L ++RY+L+ GGK++R L A + V ++E Sbjct: 45 DCFLDQVSPPTATPPTTLHESMRYSLMAGGKRVRPILTIAAAEAIGATPPGLMAVACSLE 104 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK--TQL 138 IH YSLIHDDLPSMDN RRGKPT H Y E AI+AG+ LLT AF++IS P+ Sbjct: 105 FIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEAMAILAGDALLTMAFDLISRPELMKGC 164 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196 + + +++ L + G GM+GGQ+ DIQ E ID + I K KTG L+ A G Sbjct: 165 EPTRQVRILQELAYGSGNMGMVGGQVFDIQAENQDIDLPTLQNIHKHKTGMLIRAAVRMG 224 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A+ A A+ + + + + E++G+ FQ+ADD+L+ Sbjct: 225 AMAAGATDRQLDDMTGYAEDIGLAFQIADDVLNV 258 >gi|254797046|ref|YP_003081883.1| putative geranyltranstransferase [Neorickettsia risticii str. Illinois] gi|254590280|gb|ACT69642.1| putative geranyltranstransferase [Neorickettsia risticii str. Illinois] Length = 256 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/227 (38%), Positives = 128/227 (56%), Gaps = 27/227 (11%) Query: 8 KLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65 KLQ+ S+ I +T+ ++L L + D+L AIRY+LL IR FLV E +LF Sbjct: 6 KLQKASRLIHETLKENLSLFPS-------EDKLFQAIRYSLLAESSHIRGFLVLELGTLF 58 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 N+ ++ + V AAIE IH +SLIHDDLP++DN RR +P HI + E TAI+AG+ LL Sbjct: 59 NIPYVDTIEVAAAIEMIHSFSLIHDDLPALDNSNERRNQPACHIAFQESTAILAGDALLV 118 Query: 126 YAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 A++I+S +P Q +++ H++ +G L DE I K Sbjct: 119 LAYQILSHYGAPLVQRTSKYVLEMITGQVHDV-----IGSSTL-TADE---------INK 163 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 MK+G+L +C S +A+++Q+E L FG +GIIFQ DD+ D Sbjct: 164 MKSGSLFALSCSSVGHLANSAQSELTVLEAFGYEIGIIFQAVDDIKD 210 >gi|257875398|ref|ZP_05655051.1| geranyltranstransferase [Enterococcus casseliflavus EC20] gi|257809564|gb|EEV38384.1| geranyltranstransferase [Enterococcus casseliflavus EC20] Length = 295 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 78/199 (39%), Positives = 123/199 (61%), Gaps = 6/199 (3%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLP 93 + RL +++Y++ GGK+IR L+ + F+ TA+ + AA+E +H YSLIHDDLP Sbjct: 26 DQRLFESMQYSIQAGGKRIRPLLLVATVAAFHKPINTAVYQCAAALEMVHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN +RRGKPT H + E AI+AG+GLLT AF++++ +++ N + L+ L+ Sbjct: 86 AMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAM--AEIEANQKVLLLQQLSKA 143 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQ DIQ E + ++ I + KTG L+ FA +G ++A ++ L Sbjct: 144 AGTQGMVAGQAADIQGENQALRLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELD 203 Query: 212 CFGENLGIIFQLADDLLDC 230 F +++G+ FQ+ DDLLD Sbjct: 204 RFAQHIGLAFQIRDDLLDA 222 >gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 309 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/231 (36%), Positives = 128/231 (55%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L+E +++ LD + + +++ A+RY+LL GGK++R L Sbjct: 19 LSTYLKERKAQVEAALD-------RSLPLGYPEKIYEAMRYSLLAGGKRLRPILCLATCE 71 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L A+ A+E +H SLIHDDLP+MDN RRGK T H Y E AI+AG+GL Sbjct: 72 LMGGTMEMAMPTACALEMLHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDMAILAGDGL 131 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 L YAFE +++ + Q++ L +G G++GGQ++D++ E I E + I Sbjct: 132 LAYAFEYVATQTQGVPAERVLQVIARLGRTVGAAGLVGGQVVDLESEGKSDIQEETLHYI 191 Query: 181 QKMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ C C G I+A A+ + ERL + +N+G+ FQ+ DD+LD Sbjct: 192 HTHKTGALLETCVVC--GGILAGATDADIERLSRYAQNIGLAFQIIDDILD 240 >gi|145298029|ref|YP_001140870.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850801|gb|ABO89122.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida A449] Length = 296 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/203 (41%), Positives = 116/203 (57%), Gaps = 9/203 (4%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RY LL GGK++R FLV + V AA+ECIH YSL+HDDLP+MD Sbjct: 31 RLRDAMRYGLLLGGKRVRPFLVYAVGEMLGVKRELLDGPAAAVECIHAYSLLHDDLPAMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHN 153 N +RRG+PTVH +DE TAI+AG+ L T AF I++ P L + +R ++ +L Sbjct: 91 NDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPLPDRLLANRVR--MLSTLARA 148 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKERL 210 G GM GGQ LD+Q E I ++ + + KTGAL+ A GA+ A L Sbjct: 149 SGYLGMCGGQALDLQAEGRQISLPELEQVHRHKTGALIECAVALGALCKADVDDTTLAAL 208 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD D Sbjct: 209 QTYAAAIGLAFQVQDDILDITGD 231 >gi|293392564|ref|ZP_06636884.1| geranyltranstransferase [Serratia odorifera DSM 4582] gi|291424966|gb|EFE98175.1| geranyltranstransferase [Serratia odorifera DSM 4582] Length = 300 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 123/204 (60%), Gaps = 11/204 (5%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDL 92 + D ++ A+R+ ALLGGK++R FLV +F V+ L L V AAIECIH YSLIHDDL Sbjct: 29 NKDAMVEAMRHGALLGGKRLRPFLVYATGEMFGVS-LNNLDVPAAAIECIHAYSLIHDDL 87 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLS 149 P+MDN +RRG+PT HI++ E AI+AG+ L T AF I++ P L+D R ++ Sbjct: 88 PAMDNDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADADMPDVALRD--RLAMVSE 145 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNE 206 L G+ GM GGQ LD+ E I+ + I ++KTGAL+ A GA+ A + Sbjct: 146 LAGASGVAGMCGGQALDLAAEGRQINLEALEQIHRLKTGALIRAAVRLGALAAGEPGRAA 205 Query: 207 KERLRCFGENLGIIFQLADDLLDC 230 +L + +G+ FQ+ DD+LD Sbjct: 206 LVQLDRYAAAIGLAFQVQDDILDV 229 >gi|225025925|ref|ZP_03715117.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353] gi|224956711|gb|EEG37920.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353] Length = 297 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 11/233 (4%) Query: 5 LPSKLQENSKRIDTILD--DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 +PS ++ SK+I+ I D L +Q +LSA+ Y++ GGK++R L+ E Sbjct: 1 MPSIKEQLSKKIEKIEQTIDFYLPEEKGLQKT----VLSAMNYSVKAGGKRLRPMLMAET 56 Query: 62 ASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F + + AAIE IH YSLIHDDLP++DN +RRG PT HI++ E AI+AG Sbjct: 57 YEMFGGADSSVIEPFMAAIEMIHTYSLIHDDLPALDNDALRRGMPTAHIKFGEAMAILAG 116 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 + LL YAFE + +I++ L LT G+ GM+GGQ +D++ E I + Sbjct: 117 DALLNYAFETAAKAFDGTNKDIQTAKALQILTRKPGIYGMIGGQTVDVEQENKAISFDTL 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I KT AL+ A GA++A AS+ E + +GI FQ+ DD+LD Sbjct: 177 MYIHNNKTAALIECAMMIGAVLAGASEKEVSMIEQIANKVGIAFQIEDDILDV 229 >gi|225024517|ref|ZP_03713709.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC 23834] gi|224942668|gb|EEG23877.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC 23834] Length = 295 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 120/200 (60%), Gaps = 5/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+LGG K++R LV A L A AA+E +H YSL+HDD+P+MD Sbjct: 32 RLHQAMRYAVLGGGKRLRPLLVLAAAELGQSEAAAAEAALAAVELVHVYSLVHDDMPAMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H+QYDE TA++ G+ L T AF+++S P L + Q++ +L G Sbjct: 92 NDSLRRGKPTCHVQYDEATALLVGDALQTLAFDVLSRPNG-LPAPRQLQMVHTLARASGS 150 Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213 GM GGQ +D+Q + I + ++ + ++KTGAL+ A GA+ + RL + Sbjct: 151 LGMAGGQAIDLQSVGQRIGQAELETMHRLKTGALIRAAVALGALSCPDLDDAALARLDDY 210 Query: 214 GENLGIIFQLADDLLDCEED 233 LG+ FQ+ DD+LDCE D Sbjct: 211 AAKLGLAFQVIDDVLDCEAD 230 >gi|170021207|ref|YP_001726161.1| geranyltranstransferase [Escherichia coli ATCC 8739] gi|169756135|gb|ACA78834.1| Polyprenyl synthetase [Escherichia coli ATCC 8739] Length = 299 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/208 (40%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MDN +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDNDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678] gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678] Length = 294 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 119/207 (57%), Gaps = 4/207 (1%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 ++ + L SA+ Y+ GGK++R L+ E L L AAIE IH YSLIH Sbjct: 24 LEEGYQKTLFSAMNYSYKAGGKRLRPILIMESYKLCGGKGSEYLPYAAAIEMIHTYSLIH 83 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLML 148 DDLP++DN +RRGK T H + E AI+AG+GLL YA+E+I + D + + Sbjct: 84 DDLPALDNDDLRRGKKTNHKVFGEAMAILAGDGLLNYAYEVILNHALNSSDQPSAIKACK 143 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 ++ G+ GM+GGQ++D++ E ID + I KT A++ +SGA +A A + Sbjct: 144 AIADGAGIYGMVGGQVVDVESESKEIDLACLDFIHLNKTAAMIVACMKSGAYLAGADDDT 203 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 E+L +G LG+ FQ+ADD+LD E D Sbjct: 204 VEKLEAYGRYLGLAFQIADDILDIEGD 230 >gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum HRM2] gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum HRM2] Length = 316 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 77/196 (39%), Positives = 113/196 (57%), Gaps = 9/196 (4%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 + GGK++R L + AL A+E IH YSL+HDDLP+MDN +RRG PT Sbjct: 55 MAGGKRLRPILCLAACEACSAPLEPALPAACALEMIHTYSLVHDDLPAMDNDDLRRGIPT 114 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK----DNIRSQLMLSLTHNIGLQGMLGG 162 H + E TAI+AG+GLLT+AF+I+S P+ K +R +L+ ++ G+ GM+ G Sbjct: 115 CHRAFGESTAILAGDGLLTHAFQILSRPENLFKVFPDPGVRLELVAIISDAAGINGMVEG 174 Query: 163 QMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 QMLD+ + DET + I +KTG ++ + +GA+ A A E L + E + Sbjct: 175 QMLDMLLQNADETVTSLELLTQIHTLKTGGMIRASVVAGAVSAGADNAMIESLAVYAEKI 234 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LD E D Sbjct: 235 GLAFQIVDDILDVEGD 250 >gi|83951988|ref|ZP_00960720.1| farnesyl diphosphate synthase [Roseovarius nubinhibens ISM] gi|83836994|gb|EAP76291.1| farnesyl diphosphate synthase [Roseovarius nubinhibens ISM] Length = 287 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 120/197 (60%), Gaps = 8/197 (4%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 L A+RYA GGK++R++LV E A L V A+ AIE +H YSL+HDD+P MD+ Sbjct: 28 LAQAMRYATEGGKRLRAYLVIEGARLHGVPAEQAIWPATAIEALHAYSLVHDDMPCMDDD 87 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG+PTVH ++DE TA++ G+ L + AFE ++ P+ +R++L L L G QG Sbjct: 88 DLRRGRPTVHRKWDEATAVLVGDALQSLAFECVADPRAG-SGEVRAELCLGLARAAGGQG 146 Query: 159 MLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M+ GQ LDI E ++ +Q KTGAL+ ++ +GA+MA A R + Sbjct: 147 MVLGQALDIAAETAGTPLSLDEITTLQAGKTGALIIWSGIAGAVMAGADPAPLTR---YA 203 Query: 215 ENLGIIFQLADDLLDCE 231 + +G+ FQ+ADD+LD E Sbjct: 204 QAVGLAFQIADDILDVE 220 >gi|257865770|ref|ZP_05645423.1| geranyltranstransferase [Enterococcus casseliflavus EC30] gi|257872105|ref|ZP_05651758.1| geranyltranstransferase [Enterococcus casseliflavus EC10] gi|257799704|gb|EEV28756.1| geranyltranstransferase [Enterococcus casseliflavus EC30] gi|257806269|gb|EEV35091.1| geranyltranstransferase [Enterococcus casseliflavus EC10] Length = 295 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 122/197 (61%), Gaps = 6/197 (3%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSM 95 RL +++Y++ GGK+IR L+ + F+ TA+ + AA+E +H YSLIHDDLP+M Sbjct: 28 RLFESMQYSIQAGGKRIRPLLLAATVAAFHKPINTAVYQCAAALEMVHTYSLIHDDLPAM 87 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRGKPT H + E AI+AG+GLLT AF++++ +++ N + L+ L+ G Sbjct: 88 DNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAM--AEIEANQKVLLLQQLSKAAG 145 Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 QGM+ GQ DIQ E + ++ I + KTG L+ FA +G ++A ++ L F Sbjct: 146 TQGMVAGQAADIQGENQALRLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELDRF 205 Query: 214 GENLGIIFQLADDLLDC 230 +++G+ FQ+ DDLLD Sbjct: 206 AQHIGLAFQIRDDLLDA 222 >gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina MBIC11017] gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina MBIC11017] Length = 301 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 78/200 (39%), Positives = 118/200 (59%), Gaps = 4/200 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + +++ A+RY+LL GGK++R L L A+ A+E IH SLIHDDLP Sbjct: 34 YPEKIYEAMRYSLLAGGKRLRPILCLAACELAGGTIEMAMPTACALEMIHTMSLIHDDLP 93 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRGKPT H +Y E AI+AG+GLL YA+E ++ Q+ +++ L H Sbjct: 94 AMDNDDFRRGKPTNHKKYGEDIAILAGDGLLAYAYEHVAIETQQVPPEQVLKVVARLGHA 153 Query: 154 IGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 + G++GGQ++D++ E ++ + + I KTGAL+ + SGA +A ASQ+ R Sbjct: 154 VAATGLVGGQVVDLESEGAEDVTLSTLNFIHAHKTGALLEASVLSGAELAGASQDLLNRC 213 Query: 211 RCFGENLGIIFQLADDLLDC 230 F N+G+ FQ+ DD+LD Sbjct: 214 SKFARNIGLAFQIIDDVLDV 233 >gi|290474684|ref|YP_003467564.1| geranyltranstransferase [Xenorhabdus bovienii SS-2004] gi|289173997|emb|CBJ80784.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Xenorhabdus bovienii SS-2004] Length = 305 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 86/218 (39%), Positives = 125/218 (57%), Gaps = 12/218 (5%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 ++D L+ T S + + + + A+LGGK++R FLV +F ++ + A+ Sbjct: 20 VNDKLMATFSSLPFLDSPLATAMLHGAVLGGKRLRPFLVYSVGEMFGLSRESLDAPALAL 79 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKT 136 ECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG+ L + AFEI++ P Sbjct: 80 ECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGESLAILAGDALQSLAFEILAKQDMPNI 139 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 L D R ++ L GL GM GGQ LD++ E ID + I + KTGAL+C A Sbjct: 140 ALSD--RLAMVAELATASGLAGMCGGQSLDLEAEGKQIDLATLEQIHRHKTGALICTAVR 197 Query: 195 SGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLD 229 GA A Q +E L + + +G+ FQ+ DD+LD Sbjct: 198 LGAY--SAGQRGREVLPLLDQYSQAIGLAFQVHDDILD 233 >gi|219854470|ref|YP_002471592.1| hypothetical protein CKR_1127 [Clostridium kluyveri NBRC 12016] gi|219568194|dbj|BAH06178.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 298 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 125/212 (58%), Gaps = 6/212 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D+ L+ + +N ++ ++ Y+L GGK+IR L ++N ++ + + AAIE Sbjct: 20 DIYLREYMKDRGTYNRKIYDSMEYSLNAGGKRIRPMLFLLTYRMYNKDYSKVMDIAAAIE 79 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+ G+ LL A I+ + Sbjct: 80 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILGGDALLNEAMSIMFRHCIGKGE 139 Query: 141 N-IRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGA 197 N IR+ ++S + G +GM+GGQ +DI E I +++ + KTGA++ + S A Sbjct: 140 NAIRACSIIS--ESAGAEGMIGGQTVDILSENVKISVDKLYYMHSRKTGAIIKASIVSAA 197 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A + E ++L+C+GE LG+ FQ+ DD+LD Sbjct: 198 VYASTGEEEIDKLKCYGEKLGLAFQIKDDILD 229 >gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21] gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21] Length = 295 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 114/197 (57%), Gaps = 4/197 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L ++RY++ GGK++R L+ AL A+E IH YSLIHDDLP+MDN Sbjct: 32 LHGSMRYSVFAGGKRVRPVLLLAACEAVGGALKPALPAACAMEMIHTYSLIHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG PT H Y E TAI+AG+ LLT AF ++S + R +++ + H G + Sbjct: 92 DDFRRGNPTNHKVYGEATAILAGDALLTEAFILLSGNGEGVDPAARLRVIHEIAHASGSR 151 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQM+D++ E ID + I KTGAL+ + +GAI+ A + + L + Sbjct: 152 GMVGGQMVDMESEGKHDIDMATLSYIHTHKTGALIRASVRAGAILGGADEEAFDALTRYA 211 Query: 215 ENLGIIFQLADDLLDCE 231 + +G+ FQ+ADD+LD E Sbjct: 212 DAIGLAFQIADDVLDVE 228 >gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus Ellin6076] gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus Ellin6076] Length = 298 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 84/228 (36%), Positives = 133/228 (58%), Gaps = 11/228 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + + +D+ LD L+ ++ +T H A+RY+L GGK+IR L E A + Sbjct: 12 LAQQQRLVDSELDRLVPPESAAPETIHR-----AMRYSLFAGGKRIRPILCIEAARTVSD 66 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + ++E IH YSLIHDDLP++DN RRGK T H + + AI+AG+ LLT A Sbjct: 67 DCAGVAAAACSLELIHTYSLIHDDLPALDNDDYRRGKLTNHKVFGDAMAILAGDSLLTLA 126 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDE--FIDETQVFMIQKMK 184 F++++ + D +++L+ L G + GM+GGQ+ D++ E D + I + K Sbjct: 127 FQVLA--QLDAPDARKTRLIAELATASGTVGGMIGGQVADLEGEGKPPDAQLLETIHRAK 184 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 TGAL+ + GAI A A++ + E L C+G+++G+ FQ+ DD+LD EE Sbjct: 185 TGALLRASLRLGAIFAGAAEPQYEALSCYGQHVGLAFQIVDDILDVEE 232 >gi|153953855|ref|YP_001394620.1| Fps [Clostridium kluyveri DSM 555] gi|146346736|gb|EDK33272.1| Fps [Clostridium kluyveri DSM 555] Length = 293 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 125/212 (58%), Gaps = 6/212 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D+ L+ + +N ++ ++ Y+L GGK+IR L ++N ++ + + AAIE Sbjct: 15 DIYLREYMKDRGTYNRKIYDSMEYSLNAGGKRIRPMLFLLTYRMYNKDYSKVMDIAAAIE 74 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+ G+ LL A I+ + Sbjct: 75 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILGGDALLNEAMSIMFRHCIGKGE 134 Query: 141 N-IRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGA 197 N IR+ ++S + G +GM+GGQ +DI E I +++ + KTGA++ + S A Sbjct: 135 NAIRACSIIS--ESAGAEGMIGGQTVDILSENVKISVDKLYYMHSRKTGAIIKASIVSAA 192 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A + E ++L+C+GE LG+ FQ+ DD+LD Sbjct: 193 VYASTGEEEIDKLKCYGEKLGLAFQIKDDILD 224 >gi|187478668|ref|YP_786692.1| geranyltranstransferase [Bordetella avium 197N] gi|115423254|emb|CAJ49787.1| geranyltranstransferase [Bordetella avium 197N] Length = 303 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 118/205 (57%), Gaps = 11/205 (5%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNH-LTAL-----RVGAAIECIHCYSLIHD 90 RL A+RYA+LGG K++R+ LV VN L A+ R AA+E IH YSL+HD Sbjct: 36 RLHEAMRYAVLGGGKRVRAALVYAAGQACPVNSSLLAIEASMDRAAAAVELIHAYSLVHD 95 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP MD+ +RRG+PT H+Q+DE TA++AG+ L AFE+++ + + Q L Sbjct: 96 DLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFELLAG--MPIAPALVVQATQVL 153 Query: 151 THNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G GM GGQ +D+ + + ++ + MKTGA++ + G ++A AS ++ Sbjct: 154 ARAAGSLGMAGGQAIDLHSVGKRLTRDELQTMHSMKTGAMLAASVTLGGVVAGASSAVRQ 213 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 L + + +G+ FQ+ DD+LD D Sbjct: 214 ALDAYAQAVGLAFQVVDDILDVTAD 238 >gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis] Length = 383 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 121/202 (59%), Gaps = 7/202 (3%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++ +R+ A+RY+LL GGK++R L L A+ A+E IH SLIHDDL Sbjct: 113 RYPERIHEAMRYSLLAGGKRVRPVLCISACELVGGTEEVAMPTACAMEMIHTMSLIHDDL 172 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSL 150 P MDN RRGKPT H + E TAI+AG+ LL++AFE +S+ K+ D I +++ L Sbjct: 173 PCMDNDDFRRGKPTNHKVFGEGTAILAGDALLSFAFEHIAVSTSKSVGTDRIL-RVVSEL 231 Query: 151 THNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 IG QG++GGQ+ DI D +D + I KT L+ + GAI++ AS NE Sbjct: 232 GRTIGSQGLVGGQVADITSEGDASVDLDTLEWIHIHKTAVLLECSVMCGAIISGASDNEI 291 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 ER++ + ++G++FQ+ DD+LD Sbjct: 292 ERIQRYARSVGLLFQVVDDILD 313 >gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426] gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus] gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Geobacillus kaustophilus HTA426] Length = 297 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 115/197 (58%), Gaps = 4/197 (2%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ Y+L GGK+IR L+ + L V AIE IH YSLIHDDLPSMDN Sbjct: 34 LKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDN 93 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPT H + E AI+AG+ LLTYAF++I+ ++ ++R QL+ L G Sbjct: 94 DDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLIAEVDDDRVPPSVRLQLIEQLAKAAGP 153 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM+ GQ D++ E + ++ I + KTG ++ ++ +GA++ A + L F Sbjct: 154 EGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFA 213 Query: 215 ENLGIIFQLADDLLDCE 231 +LG+ FQ+ DD+LD E Sbjct: 214 AHLGLAFQIRDDILDIE 230 >gi|297621395|ref|YP_003709532.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044] gi|297376696|gb|ADI38526.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044] Length = 294 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 89/202 (44%), Positives = 125/202 (61%), Gaps = 4/202 (1%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A RYALLGG K+IR L A LFN + AL AIE IH YS+IHDDLP MD+ Sbjct: 33 LYEAARYALLGGGKRIRPILTLATAKLFNADIEAALVPACAIEMIHTYSVIHDDLPCMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKP++H Q++E A++ G+ LLT AFE+IS + QL ++ L+ ++ G + Sbjct: 93 DDFRRGKPSLHKQFNEALAVLTGDFLLTRAFEVISEDR-QLNVEMQIDLIRTIACASGGK 151 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ++DI E +D Q+ + KTGAL+ A E G I+A AS E++ F + Sbjct: 152 GMIGGQVIDISSEGKGLDLKQLQHLHAKKTGALITAAVECGCIVASASDEERQPALQFAQ 211 Query: 216 NLGIIFQLADDLLDCEEDLPKK 237 ++G+ FQ+ DDLLD + K+ Sbjct: 212 DIGLAFQIVDDLLDITSGVKKR 233 >gi|329725410|gb|EGG61893.1| geranyltranstransferase [Staphylococcus epidermidis VCU144] gi|329735348|gb|EGG71640.1| geranyltranstransferase [Staphylococcus epidermidis VCU045] Length = 298 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +++Y+L GGK+IR ++ + N ++ L A+E IH YSLIHDDLP+MDN Sbjct: 35 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK T H Y E AI+AG+ LLT AFE++S+ T ++D+++ ++ L+ G Sbjct: 95 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSND-TTIEDSVKVSIIKRLSKASGHL 153 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD++ E I + I + KTGAL+ F+ + +A QN + L F Sbjct: 154 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 213 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLD D K Sbjct: 214 HLGMMFQIKDDLLDVYGDESK 234 >gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328] gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328] Length = 316 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 83/231 (35%), Positives = 130/231 (56%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L + + ++ LD + + + +++ ++RY+L+ GGK++R L Sbjct: 26 LSTYLSQKKELVEAALD-------AAIAVTYPEKIYESMRYSLMAGGKRLRPILCLATCE 78 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+GL Sbjct: 79 LLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGL 138 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 L+YAFE +++ + Q++ L +G G++GGQ++D+ E I E + I Sbjct: 139 LSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDLASEGLSDISEETLTFI 198 Query: 181 QKMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ C C GAI+A A++ + ERL + +N+G+ FQ+ DD+LD Sbjct: 199 HTHKTGALLEACVVC--GAILAGANETDLERLSRYAKNIGLAFQIVDDILD 247 >gi|57867011|ref|YP_188659.1| geranyltranstransferase [Staphylococcus epidermidis RP62A] gi|293366522|ref|ZP_06613199.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W2(grey)] gi|57637669|gb|AAW54457.1| geranyltranstransferase [Staphylococcus epidermidis RP62A] gi|291319291|gb|EFE59660.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W2(grey)] Length = 293 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +++Y+L GGK+IR ++ + N ++ L A+E IH YSLIHDDLP+MDN Sbjct: 30 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK T H Y E AI+AG+ LLT AFE++S+ T ++D+++ ++ L+ G Sbjct: 90 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSND-TTIEDSVKVSIIKRLSKASGHL 148 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD++ E I + I + KTGAL+ F+ + +A QN + L F Sbjct: 149 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 208 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLD D K Sbjct: 209 HLGMMFQIKDDLLDVYGDESK 229 >gi|285019214|ref|YP_003376925.1| geranylgeranyl pyrophosphate synthase [Xanthomonas albilineans GPE PC73] gi|283474432|emb|CBA16933.1| putative geranylgeranyl pyrophosphate synthase protein [Xanthomonas albilineans] Length = 293 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 121/221 (54%), Gaps = 9/221 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R++ LD L A Q RL +A+R+A LGG K++R LV +LF + Sbjct: 12 QRVEAGLDAHLPAIA-----QAPQRLHAAMRHATLGGGKRMRPLLVYASGALFGTDPARL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L + AFE+++ Sbjct: 67 DAPALAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQSLAFELLA 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMC 190 +R Q + +L G GM GGQ LDI I + + + +KTGAL+ Sbjct: 127 K-ADAADATLRVQWLQTLAEATGAAGMCGGQALDIDATGIVQPLADLQRMHALKTGALIR 185 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + GA+ A L F LG+ FQ+ DD+LD E Sbjct: 186 ASVRLGALGGGADHAALNHLDAFASALGLAFQIRDDILDVE 226 >gi|225377100|ref|ZP_03754321.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM 16841] gi|225211005|gb|EEG93359.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM 16841] Length = 303 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 82/229 (35%), Positives = 127/229 (55%), Gaps = 10/229 (4%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 +++Q I+ I+ L + +T ++ A+ Y++L GGK++R L++E LF Sbjct: 12 AEIQTRVDEIEQIIKRYLPEEEGWQKT-----IMEAMNYSILAGGKRLRPMLMSETYRLF 66 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 AA+E IH YSL+HDDLP+MDN RRGK T H Y E I+AG+ LL Sbjct: 67 GGKSKVIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLN 126 Query: 126 YAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQ 181 YAFE + DN + M L G+ GM+GGQ++D+Q E I + ++ I Sbjct: 127 YAFETAAKAFDMEPDNRNIGKAMQILATKAGIYGMVGGQVVDVQSEDSGDITKEKLDFIY 186 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++KTGAL+ + GA++A A++NE+ + +G+ FQ+ DD+LD Sbjct: 187 RLKTGALIESSMLIGAVLAGATKNEQNTIEKAATEVGLAFQIQDDILDV 235 >gi|6016394|sp|O66126|ISPA_MICLU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|2982677|dbj|BAA25265.1| farnesyl diphosphate synthase [Micrococcus luteus] Length = 291 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 88/197 (44%), Positives = 117/197 (59%), Gaps = 5/197 (2%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL AI Y+L GGK+IR LV N L G A+E IH YSLIHDDLP+MD Sbjct: 30 RLHEAINYSLSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIALEMIHTYSLIHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGK T H ++DE TAI+AG+ LLT AF+ I + TQL I+ L+ L+ G Sbjct: 90 NDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCILN--TQLNAEIKLSLINLLSTASGS 147 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+ GQMLD+Q E T ++ I KTG L+ A S I+ + + + E+L G Sbjct: 148 NGMVYGQMLDMQGEHKTLTLNELERIHIHKTGELIRAAIVSAGIIMNFNDAQIEQLNIIG 207 Query: 215 ENLGIIFQLADDLLDCE 231 +N+G++FQ+ DD+LD E Sbjct: 208 KNVGLMFQIKDDILDVE 224 >gi|316985189|gb|EFV64141.1| putative geranyltranstransferase [Neisseria meningitidis H44/76] gi|325135064|gb|EGC57692.1| geranyltranstransferase [Neisseria meningitidis M13399] gi|325141097|gb|EGC63600.1| geranyltranstransferase [Neisseria meningitidis CU385] gi|325199464|gb|ADY94919.1| geranyltranstransferase [Neisseria meningitidis H44/76] Length = 298 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 82/196 (41%), Positives = 113/196 (57%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT HI+Y E TA++ G+ L T AF+++S P T+L + ++ L G +GM Sbjct: 99 RRGKPTCHIKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMA 157 Query: 161 GGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + Q + Q +KTGAL+ A GA S E L + L Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|257125255|ref|YP_003163369.1| polyprenyl synthetase [Leptotrichia buccalis C-1013-b] gi|257049194|gb|ACV38378.1| Polyprenyl synthetase [Leptotrichia buccalis C-1013-b] Length = 296 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 87/243 (35%), Positives = 140/243 (57%), Gaps = 15/243 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L L++ K ++ L +LL + + ++ ++L A+ YA++ GGK+IR L+ Sbjct: 2 LREYLEDKKKIVEGNLKELL----GNYENKYPEKLSEAMEYAVMNGGKRIRPILMYMICD 57 Query: 64 LFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF N+ + + AA+E IHCYSL+HDDLP+MDN RRGK TVH +Y+E ++ Sbjct: 58 LFEKNNCKSYDKIKEIAAALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGVLV 117 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 G+ LLT AF II++ K+ L D + +++ L+ G GM+GGQ +D++ E ++ + Sbjct: 118 GDVLLTEAFGIIANSKS-LGDKNKIEIISKLSEYAGFFGMVGGQFVDMESENKKVEIDTL 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KTG L+ A E I ++E++ + + LGI FQ+ DD+LD E E++ Sbjct: 177 KYIHAHKTGKLLTAAIELPMIALDIESEKREKMVEYSKLLGIAFQIKDDILDIEGNFEEI 236 Query: 235 PKK 237 KK Sbjct: 237 GKK 239 >gi|331091277|ref|ZP_08340118.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404724|gb|EGG84263.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium 2_1_46FAA] Length = 296 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 117/201 (58%), Gaps = 5/201 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 H ++++ A+ Y L+ GGK+IR L+ E +F AAIE IH YSLIHDDLP Sbjct: 28 HQEKIMEAMEYNLMAGGKRIRPMLMKETYEMFGGTGKIIEPFMAAIEMIHTYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLT 151 +MDN RRG+ T HI Y E I+AG+ LL YAFE S +DN + + + L Sbjct: 88 AMDNDDYRRGRKTTHIVYGEAMGILAGDALLNYAFETASEAFDMDRDNGYLIGKALQILG 147 Query: 152 HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G+ GM+GGQ++D+ + +D+ + I +KTGAL+ + GAI+A A++ E + Sbjct: 148 RKAGIYGMIGGQVVDVAASGKAVDKDVLDFIYDLKTGALIEASMMIGAILAGATEQEVKI 207 Query: 210 LRCFGENLGIIFQLADDLLDC 230 + + +G+ FQ+ DD+LD Sbjct: 208 IESAAKKVGLAFQIQDDILDV 228 >gi|296313727|ref|ZP_06863668.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768] gi|296839651|gb|EFH23589.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768] Length = 298 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 118/199 (59%), Gaps = 5/199 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN Sbjct: 36 LHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDN 95 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPT H++Y E TA++ G+ L T AF+++S P T+L + ++ L G + Sbjct: 96 DSLRRGKPTCHVKYGEATALLVGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSR 154 Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFG 214 GM GGQ +D+ + + + + + +KTGAL+ A GA+ + S++ L + Sbjct: 155 GMAGGQAIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLGAMSCPNLSEDSLAVLDDYA 214 Query: 215 ENLGIIFQLADDLLDCEED 233 LG+ FQ+ DD+LDCE D Sbjct: 215 AKLGLAFQVIDDVLDCEAD 233 >gi|225570636|ref|ZP_03779659.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM 15053] gi|225160554|gb|EEG73173.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM 15053] Length = 300 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 87/231 (37%), Positives = 131/231 (56%), Gaps = 20/231 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 K+QE I+T+L D L + Q + ++ A+ Y+LL GGK++R L+ E LFN Sbjct: 14 KVQE----IETVLQDYLPR-----QKGYQSIIMEAMSYSLLAGGKRLRPMLMKETYDLFN 64 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I+AG+ LL Y Sbjct: 65 GRSKALKPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRRTTHVVYGEDMGILAGDALLNY 124 Query: 127 AFE-----IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-- 179 AFE ++ P+ L + + + L G+ GM+GGQ++D+++ D ++ + Sbjct: 125 AFETAFKAFVTEPEDSL---LIGRALGVLGEKAGIYGMIGGQVIDVRETGRDISKEVLDT 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I ++KT AL+ A GAI+ AS+ E + + N+GI FQ+ DD+LD Sbjct: 182 IYELKTAALIESAMMIGAILGGASEEEVKAVEQIAGNVGIAFQIQDDILDV 232 >gi|126736181|ref|ZP_01751924.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2] gi|126714347|gb|EBA11215.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2] Length = 302 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 87/201 (43%), Positives = 128/201 (63%), Gaps = 17/201 (8%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 +A+ YA GGK +R+FL E A + +N + A AAIECIH YSL+HDDLP MD+ + Sbjct: 46 AAMLYAASGGKALRAFLALETARMLGINPVAAAGAAAAIECIHAYSLVHDDLPCMDDDDL 105 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGL 156 RRG+PTVH ++D+ TA++AG+GL AFE++ +P+ +L L++SL++ G+ Sbjct: 106 RRGQPTVHQKWDQATAVLAGDGLQALAFELLIQAECAPRAKLN------LLMSLSNAAGV 159 Query: 157 QGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 +GM+GGQ DI E +D Q+ +Q KTGAL+ ++ G MA + E+E L Sbjct: 160 RGMVGGQAADIAAETAAVPLDLEQIMDLQASKTGALISWSALVGPRMA---ETEREPLSI 216 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G NLG+ FQ+ADD+LD D Sbjct: 217 YGANLGLAFQIADDVLDATGD 237 >gi|257869058|ref|ZP_05648711.1| geranyltranstransferase [Enterococcus gallinarum EG2] gi|257803222|gb|EEV32044.1| geranyltranstransferase [Enterococcus gallinarum EG2] Length = 294 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 80/187 (42%), Positives = 114/187 (60%), Gaps = 9/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+T + F+ + L + AA+E IH YSLIHDDLP+MD+ +RRGKPT Sbjct: 40 GGKRIRPLLLTATVASFHKSMTLGVYQTAAALEMIHTYSLIHDDLPAMDDDALRRGKPTN 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H Y E AI+AG+GLLT AF+++S L+ + + L+ L+H G GM+ GQ DI Sbjct: 100 HKVYGEALAILAGDGLLTAAFQLLS--LADLEPDKKILLLQQLSHTAGTAGMVAGQAADI 157 Query: 168 QDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 Q E +DE + I + KTG L+ FA +G I+A ++ + L F ++G+ FQ+ Sbjct: 158 QGENQQLTLDE--LISIHERKTGELIRFAVIAGGILADQTEEVIQLLDQFARHMGLAFQI 215 Query: 224 ADDLLDC 230 DDLLD Sbjct: 216 RDDLLDV 222 >gi|238783627|ref|ZP_04627648.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970] gi|238715505|gb|EEQ07496.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970] Length = 306 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 87/197 (44%), Positives = 122/197 (61%), Gaps = 7/197 (3%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMD 96 L+ A+RY A+LGGK++R +LV +F ++ LTAL AAIECIH YSLIHDDLP+MD Sbjct: 39 LVEAMRYGAVLGGKRLRPYLVYATGQMFGLS-LTALDAPAAAIECIHAYSLIHDDLPAMD 97 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIG 155 N +RRG+PT HI++ E AI+AG+ L T AF I++ + + D R ++ L H G Sbjct: 98 NDDLRRGQPTCHIKFGEANAILAGDALQTLAFTILAEAEMPDVADKDRLAMVAELAHASG 157 Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRC 212 + GM GGQ LD++ E I ++ I + KTGAL+ A GA+ A A L Sbjct: 158 VAGMCGGQALDLEAEARQISLAELEQIHRHKTGALIRAAVRLGALAAGARGRAALPLLDR 217 Query: 213 FGENLGIIFQLADDLLD 229 + E +G+ FQ+ DD+LD Sbjct: 218 YAEAIGLAFQVQDDILD 234 >gi|282889795|ref|ZP_06298334.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500369|gb|EFB42649.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 305 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 91/226 (40%), Positives = 128/226 (56%), Gaps = 15/226 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68 Q + I+ L+ L + SHM Q L A RY+LLGG K+IR L Sbjct: 19 QAALQHIEACLEKLFPE--SHMPYQ---SLFDAARYSLLGGGKRIRPLLSLAVTQALTGT 73 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A++ A+E IH YSL+HDDLPSMDN RRGKP++H + E AI+ G+ LLTYAF Sbjct: 74 FTQAIQPACALELIHTYSLVHDDLPSMDNDDFRRGKPSLHKVFPEGHAILTGDFLLTYAF 133 Query: 129 EII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKM 183 E++ SSP + + +L+ L + G GM+ GQ++DI Q +D Q I + Sbjct: 134 EVLCSSPGLTAQQIV--ELVALLAKSAGGHGMIAGQIMDISAVNQTLTLDNLQ--HIHQT 189 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ A E GAI++ + E+ L+ FG +G+ FQ+ DD+LD Sbjct: 190 KTGALITCAVEFGAIVSGCAPVERALLQQFGNEIGLAFQIIDDVLD 235 >gi|116333612|ref|YP_795139.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC 367] gi|116098959|gb|ABJ64108.1| farnesyl-diphosphate synthase [Lactobacillus brevis ATCC 367] Length = 300 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 7/201 (3%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDD 91 H+ +L +A+ Y++L GGK++R L V + R A+E +H YSLIHDD Sbjct: 31 HDAQLAAAMTYSVLAGGKRLRPLLTVATMRSLGVTFVPERHWRPVMALELLHTYSLIHDD 90 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MDN +RRG+PT H+++ A +AG+GLLT AF+ +++ T L +++ L+ +L Sbjct: 91 LPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTA--TDLPATMQAALVQALA 148 Query: 152 HNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G GM+ GQ DIQ E ++ +Q+ ++ K KTGAL+ +A ++G I+ A + + Sbjct: 149 TAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPA 208 Query: 210 LRCFGENLGIIFQLADDLLDC 230 F + G+ FQ+ DD+LD Sbjct: 209 YLQFADAFGLAFQIYDDILDV 229 >gi|254464346|ref|ZP_05077757.1| polyprenyl synthetase [Rhodobacterales bacterium Y4I] gi|206685254|gb|EDZ45736.1| polyprenyl synthetase [Rhodobacterales bacterium Y4I] Length = 294 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 91/223 (40%), Positives = 131/223 (58%), Gaps = 12/223 (5%) Query: 20 LDDLLLQTASHMQTQ--HNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77 L D + +HM+ + D L +A+RYA+ GGK +R FLV E A L V A+ Sbjct: 16 LKDAQARITAHMEARLAGGDDLHAAMRYAITGGKMLRGFLVLESARLHGVPAEAAIEAAL 75 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIECIH YSL+HDDLP MD+ +RRG+PTVH ++DE A++AG+ L ++AFE+++ P Sbjct: 76 AIECIHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEAMAVLAGDSLQSFAFELLADPSVG 135 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFAC 193 L+ L + G GM+ GQMLDI E E ++ +Q KTG L+ ++ Sbjct: 136 PHALT---LIRGLAQSSGKDGMVSGQMLDIAAETATEPLTLKEITRLQGRKTGCLIEWSA 192 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +GA++A A + LR + LG+ FQ+ADD+LD E D K Sbjct: 193 TAGAVLAGA---DPAPLRQYASALGLAFQIADDILDVEGDAAK 232 >gi|218660042|ref|ZP_03515972.1| geranyltranstransferase protein [Rhizobium etli IE4771] Length = 194 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 73/145 (50%), Positives = 108/145 (74%), Gaps = 1/145 (0%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++L+ N++ I+ +L LL A + + L SA+ YA+L GGK++R FLV E A+L Sbjct: 10 TRLKNNAREIEALLVALLSPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVESAALL 69 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TAI+AG+ LLT Sbjct: 70 GGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHIKFDEATAILAGDSLLT 129 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSL 150 YAF+I+++P+T L D ++ L+L+L Sbjct: 130 YAFDIVAAPETALPDASKASLVLAL 154 >gi|291550249|emb|CBL26511.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus torques L2-14] Length = 296 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 79/197 (40%), Positives = 118/197 (59%), Gaps = 5/197 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 ++ A+ Y+L+ GGK++R L+ E LF AA+E IH YSL+HDDLP+MDN Sbjct: 32 IMEAMEYSLMAGGKRLRPMLMMETYRLFGGETEVIYPFMAAMEMIHTYSLVHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL-KDNIR-SQLMLSLTHNIG 155 RRG+ T HI Y E I+AG+ LL YAFE Q ++++R Q M L G Sbjct: 92 DEYRRGRKTTHIVYGEDMGILAGDALLNYAFETACKAFEQFPEESLRIGQAMRVLARKAG 151 Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GM+GGQ++D+++ IDE + I ++KTGAL+ A GAI+A AS+ + + ++ Sbjct: 152 IYGMIGGQVVDVKESGHQIDEEVLDFIFRLKTGALIESAMMIGAILAGASKEDVKSMQKI 211 Query: 214 GENLGIIFQLADDLLDC 230 +G+ FQ+ DD+LD Sbjct: 212 AGKIGMAFQIQDDILDV 228 >gi|153802298|ref|ZP_01956884.1| geranyltranstransferase [Vibrio cholerae MZO-3] gi|124122180|gb|EAY40923.1| geranyltranstransferase [Vibrio cholerae MZO-3] Length = 294 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 91/239 (38%), Positives = 130/239 (54%), Gaps = 22/239 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ Sbjct: 55 QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L T AF I++ + + R ++ +L G+QGM GQ LD+ ++ I ++ Sbjct: 115 LQTLAFTILAEGDLSAAGETQRVAMIQALAEASGVQGMCLGQALDLAAENRLISLEELET 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233 I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD D Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229 >gi|242242790|ref|ZP_04797235.1| geranyltranstransferase [Staphylococcus epidermidis W23144] gi|242233926|gb|EES36238.1| geranyltranstransferase [Staphylococcus epidermidis W23144] gi|319400858|gb|EFV89077.1| geranyltranstransferase [Staphylococcus epidermidis FRI909] Length = 288 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +++Y+L GGK+IR ++ + N ++ L A+E IH YSLIHDDLP+MDN Sbjct: 25 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG+ T H Y E AI+AG+ LLT AFE++S+ T ++D+++ ++ L+ G Sbjct: 85 DDYRRGELTNHKVYGEWKAILAGDALLTKAFELVSND-TTIEDSVKVNIIQRLSKASGHL 143 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD++ E I + I K KTGAL+ F+ + +A QN + L F Sbjct: 144 GMVGGQALDMESEGKSIRLETLESIHKTKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 203 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLD D K Sbjct: 204 HLGMMFQIKDDLLDVYGDESK 224 >gi|85058635|ref|YP_454337.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans'] gi|84779155|dbj|BAE73932.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans'] Length = 300 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 118/202 (58%), Gaps = 9/202 (4%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+R+ ALLGGK++R FLV + LF + + AAIECIH YSLIHDDLP+MDN Sbjct: 33 LIQAMRHGALLGGKRLRPFLVYQTGRLFGLTAASLDAPAAAIECIHAYSLIHDDLPAMDN 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNI 154 +RRG PT H+++ E TAI+AG+ L T AF I++ PK +D R Q++ +L Sbjct: 93 DALRRGLPTCHVKFGETTAILAGDALQTLAFSILADVEMPKVSPQD--RLQMISALAAAS 150 Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LR 211 G GM GQ LD++ E + ++ I + KTGAL+ A G + A R L Sbjct: 151 GADGMCLGQALDLEAEGQQVSAARLETIHRHKTGALIRSAVRMGVLAAGERGGPALRYLD 210 Query: 212 CFGENLGIIFQLADDLLDCEED 233 F +G+ FQ+ DD+LD D Sbjct: 211 RFAAAIGLAFQVQDDILDVVGD 232 >gi|126730373|ref|ZP_01746184.1| geranylgeranyl pyrophosphate synthetase [Sagittula stellata E-37] gi|126709106|gb|EBA08161.1| geranylgeranyl pyrophosphate synthetase [Sagittula stellata E-37] Length = 302 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 85/199 (42%), Positives = 126/199 (63%), Gaps = 9/199 (4%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 + +A+RYA+ GGK +R+F+V E A LF+++ A AIE +H YSL+HDDLP MD+ Sbjct: 44 VAAAMRYAVEGGKALRAFMVIEGARLFDIDRQHAAPAAGAIEALHAYSLVHDDLPCMDDD 103 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRGKPTVH ++DE TA++AG+ L AF++++ T + R +L+ L GL+G Sbjct: 104 DMRRGKPTVHRKWDETTAVLAGDALQALAFQLVT--HTACPADRRLELVAGLATAAGLRG 161 Query: 159 MLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M+GGQ DI E ++ +Q KTGAL+ ++C +GA+MA S LR +G Sbjct: 162 MVGGQARDIAAESAQTPLTLEEITALQAGKTGALISWSCGAGAVMAGQSTGP---LRRYG 218 Query: 215 ENLGIIFQLADDLLDCEED 233 + LG+ FQ+ DD+LD E D Sbjct: 219 DCLGLAFQIWDDVLDVEGD 237 >gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] Length = 294 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 11/236 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + L+E ID++L T + + +L A++Y+L +GGK++R L Sbjct: 3 LKAYLKERKALIDSVL-----LTYLPPEPEFGKKLYEAVKYSLTVGGKRLRPILCLAGCE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + N AL AIE IH YSLIHDDLP+MDN +RRG PT +++ E TAI+AG+ L Sbjct: 58 IVGGNRNDALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWVKFGEATAILAGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 L AFE+++ + N + +++ + G+ GM+ GQ D+ E + ++ I Sbjct: 118 LNRAFEVLAD--WEFDCNRKVKVISEIARASGMLGMVLGQQCDLDAEGRGDVPLEELLFI 175 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 K KTG L+ + SG I S E + LR +G++LG+ FQ+ DD+LD D K Sbjct: 176 HKHKTGRLITASVVSGGITGGGSPEEIDALRRYGDSLGLAFQIIDDVLDVVGDQEK 231 >gi|310689999|pdb|3P8R|A Chain A, Crystal Structure Of Polyprenyl Synthase From Vibrio Cholerae Length = 302 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 12 ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 62 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ Sbjct: 63 QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 122 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L T AF I++ + + R ++ +L G QGM GQ LD+ ++ I ++ Sbjct: 123 LQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELET 182 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233 I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD D Sbjct: 183 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 237 >gi|237756447|ref|ZP_04584985.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691395|gb|EEP60465.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5] Length = 287 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 91/221 (41%), Positives = 132/221 (59%), Gaps = 15/221 (6%) Query: 20 LDDLLLQTASHMQTQHN--------DRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVN 68 D+L + AS + Q + + L +A+RY+L GGK+IR LV E A +VN Sbjct: 3 FKDILKEKASFINKQLDRFVPNCIPEELSNAMRYSLEAGGKRIRPILVIESAKAVKEDVN 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + + E IH YSLIHDDLP+MD+ +RRGKPT H + E AI+AG+GLLTYAF Sbjct: 63 VEDFIDIAISTEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAGDGLLTYAF 122 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E+IS+ K + I + + L+HN+G+ GM+GGQ DI F D V I KT Sbjct: 123 EVISNNKKLSAEKIVKVINI-LSHNVGIYGMVGGQAADILPNFKD---VEFIHLNKTAKF 178 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + C+ G ++A A++ E +L+ +G N+G+ FQ+ DD+LD Sbjct: 179 LSACCQIGGVLADATEEEILKLKNYGINIGLAFQIWDDILD 219 >gi|332638330|ref|ZP_08417193.1| farnesyl-diphosphate synthase [Weissella cibaria KACC 11862] Length = 287 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 121/220 (55%), Gaps = 7/220 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 KL E S + ++D L +H + N + A+ YA++ GGK++R L A + Sbjct: 2 KLSEFSATVVPQIEDKLAAELAH--STSNQTMRDAMTYAVMAGGKRLRPLLTLAVAQSYG 59 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + LR +A+E IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ L Sbjct: 60 LGINGLLRAASALELIHTYSLIHDDLPAMDNDDMRRGKPTTHKAFGEDVAILAGDALQPL 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKM 183 A++ ++S L +++L L L G GM+ GQ++D+ I QV I Sbjct: 120 AYQWLASDPL-LTTPQKAELTLQLALASGADGMVAGQVMDMAATNAATISLDQVKAIHYR 178 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 KTGAL+ +A +G IMAHAS KE L FG G+ FQ+ Sbjct: 179 KTGALIAYAAIAGGIMAHASDEVKETLWNFGMAYGLAFQI 218 >gi|34498146|ref|NP_902361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472] gi|34104001|gb|AAQ60361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472] Length = 298 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 84/200 (42%), Positives = 120/200 (60%), Gaps = 4/200 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA L GGK++R LV L R+GAA+E +H YSL+HDD+P MD Sbjct: 34 RLHEAMRYATLEGGKRVRPLLVFAAGELVGAQADNLARIGAALEMVHAYSLVHDDMPCMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT HI YD+ TA++ G+ L T AFE+IS P + + +++ +L H G Sbjct: 94 NDVLRRGKPTCHIAYDDATALLVGDALQTRAFELISQPMPDIAPASQLEMVRALAHAAGH 153 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213 GM GGQ +D+ + T ++ + +KTGAL+ A +G++ S EKE L F Sbjct: 154 AGMAGGQAIDLASVGLPLTLPELEFMHMLKTGALIRAAVLAGSMAGRELSAAEKEALDAF 213 Query: 214 GENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LDCE D Sbjct: 214 AKRIGLAFQVVDDILDCEAD 233 >gi|28211243|ref|NP_782187.1| geranylgeranyl pyrophosphate synthase [Clostridium tetani E88] gi|28203683|gb|AAO36124.1| geranyltranstransferase [Clostridium tetani E88] Length = 288 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 81/218 (37%), Positives = 127/218 (58%), Gaps = 5/218 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D L+ + +N + A+ Y++ +GGK+IR L ++N N+ AL + AIE Sbjct: 11 DTWLKEYFKDKGTYNKSVYEAMSYSVNIGGKRIRPILALITYKIYNKNYKEALSIACAIE 70 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP MD+ +RRGKPT H + + A++AG+GLL AF II Q K Sbjct: 71 MIHTYSLIHDDLPCMDDD-LRRGKPTNHKVFGDGLAVLAGDGLLNEAFNIILKNGCQ-KG 128 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAI 198 + + G++GM+GGQ++D+ ++ I+ ++ I + KT AL+ + +GAI Sbjct: 129 MTWVEAGYEIGKASGVEGMIGGQVVDVLNTNKSIEIEELDYIHEKKTAALITASIMTGAI 188 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + A++ + L+ FG+ LG+ FQ+ DD+LD E D K Sbjct: 189 LGEANEKDTTILKEFGKKLGLAFQIKDDILDIESDTRK 226 >gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L] gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L] Length = 309 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 86/227 (37%), Positives = 124/227 (54%), Gaps = 15/227 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+E I++ LD L + D++ A+RY+LL GGK++R L L Sbjct: 23 LKERKALIESALDQALPR-------MEPDKIYEAMRYSLLAGGKRLRPILCLATCELMGG 75 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+ A+E IH SLIHDDLP+MDN RRGK T H + E AI+AG+GLL YA Sbjct: 76 TVEMAMPTSCALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 135 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMK 184 FE ++ + Q++ L +G G++GGQ+LD++ E I E + I K Sbjct: 136 FEYAAAQTKNVPAPQVLQVVAWLAKAVGASGLVGGQVLDLESEGKSDIKEETLSFIHTHK 195 Query: 185 TGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 TGAL+ C C G I+A A+ +RL + +N+G+ FQ+ DD+LD Sbjct: 196 TGALLEACVVC--GGILAGATAANLQRLSKYAQNIGLAFQIVDDILD 240 >gi|229530007|ref|ZP_04419397.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] gi|229333781|gb|EEN99267.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] Length = 294 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ Sbjct: 55 QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L T AF I++ + + R ++ +L G QGM GQ LD+ ++ I ++ Sbjct: 115 LQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233 I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD D Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229 >gi|153830561|ref|ZP_01983228.1| geranyltranstransferase [Vibrio cholerae 623-39] gi|148873959|gb|EDL72094.1| geranyltranstransferase [Vibrio cholerae 623-39] Length = 294 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ Sbjct: 55 QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L T AF I++ + + R ++ +L G QGM GQ LD+ ++ I ++ Sbjct: 115 LQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233 I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD D Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229 >gi|329298746|ref|ZP_08256082.1| polyprenyl synthetase [Plautia stali symbiont] Length = 299 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 82/200 (41%), Positives = 118/200 (59%), Gaps = 5/200 (2%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++A++Y ALLGGK++R FLV + + AA+ECIH YSLIHDDLP+MD+ Sbjct: 32 LVNAMQYGALLGGKRLRPFLVYATGEMLRAEAASLDAPAAAVECIHAYSLIHDDLPAMDD 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI+Y E TAI+AG+ L T AF I++ P + R ++ L G+ Sbjct: 92 DALRRGQPTCHIKYGEDTAILAGDALQTLAFTILADQPMPGVSPQDRIAMISELAQASGV 151 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213 GM GQ LD+ E +D Q+ I + KTGAL+ A GA+ A A+ + +L + Sbjct: 152 AGMCCGQALDLAAEGKSVDLNQLEQIHRHKTGALIRAAVRLGALTAGAAGRDALPQLDIY 211 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 212 ANAIGLAFQVQDDILDVVGD 231 >gi|71892019|ref|YP_277749.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796125|gb|AAZ40876.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 306 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 87/240 (36%), Positives = 131/240 (54%), Gaps = 11/240 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 ++L+E+ +R+D + L+ Q L+ AIRY+ LLGGK++R FLV + Sbjct: 6 FANELRESHQRVDEAISRYLIM----FLKQDVSLLMQAIRYSVLLGGKRLRPFLVYQTGK 61 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF + AAIECIH YSLIHDDLP MDN +RRG PT H+++ E A++AG+ L Sbjct: 62 LFGIRSSNLNAPAAAIECIHAYSLIHDDLPIMDNDKLRRGHPTCHVKFGESIAVLAGDAL 121 Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM 179 T AF I+S + D R +++ +L G GM GQ LD+ ++ I TQ+ Sbjct: 122 HTLAFTILSEAHMPTITDQDRLKMIATLASASGANGMCLGQSLDLINKNNKNISATQLET 181 Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 I + KTG+L+ A GA+ A + + L + +G+ FQ+ DD++D +K Sbjct: 182 IYQYKTGSLIRAAVRIGALAAGNKSCDDVLSFLDHYATTIGLAFQIQDDIIDISHAYDQK 241 >gi|317492932|ref|ZP_07951356.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919054|gb|EFV40389.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 301 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 5/206 (2%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + +L++A+RY ALLGGK++R +LV +F ++ AA+ECIH YSL+HDDLP+ Sbjct: 30 DGQLVAAMRYGALLGGKRLRPYLVYATGEMFGLSLDNLDAPAAAVECIHAYSLMHDDLPA 89 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153 MD+ +RRG+PT HI++ E AI+AG+ L T AF I++ SP + + R ++ L Sbjct: 90 MDDDNLRRGQPTSHIKFGEAHAILAGDALQTLAFSILADSPMPDVAVSDRLAMLSELAQA 149 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210 G+ GM GGQ LD++ E ++D + I KTGAL+ A GA+ A + L Sbjct: 150 SGVAGMCGGQALDLEAEGKYVDLQSLERIHNHKTGALIRCAIRMGALAAGDTGRAALPLL 209 Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236 + +G+ FQ+ DD+LD D K Sbjct: 210 DRYAAAIGLAFQVQDDILDVIGDSEK 235 >gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630] gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26] gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932] gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42] gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255] gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55] gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34] gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79] gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196] gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291] gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58] gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile] gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196] gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291] Length = 295 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 79/233 (33%), Positives = 131/233 (56%), Gaps = 11/233 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L+E + ++ +L + + + + +T ++ A+ Y+L GGK++R L E + Sbjct: 7 LKEKASFVEKVLKEYMPKEEGYQKT-----VIEAMNYSLSAGGKRLRPILTLEACKIVGG 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N A+ AIE IH YSLIHDDLP++DN +RRG+PT H Y E I+AG+ LL YA Sbjct: 62 NEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYA 121 Query: 128 FEIISSPKTQLKDNIRSQL--MLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183 FE++ + K+N L + + G+ GM+GGQ++D++ E I++ ++ I Sbjct: 122 FEVMLAGSIN-KENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN 180 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT A+M +GA + A+ + E + + +N+G+ FQ+ DD+LD D K Sbjct: 181 KTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAK 233 >gi|153827049|ref|ZP_01979716.1| geranyltranstransferase [Vibrio cholerae MZO-2] gi|229513011|ref|ZP_04402477.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] gi|229525505|ref|ZP_04414910.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|254225115|ref|ZP_04918729.1| geranyltranstransferase [Vibrio cholerae V51] gi|262191492|ref|ZP_06049677.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae CT 5369-93] gi|297581274|ref|ZP_06943198.1| geranyltranstransferase [Vibrio cholerae RC385] gi|125622502|gb|EAZ50822.1| geranyltranstransferase [Vibrio cholerae V51] gi|149739090|gb|EDM53386.1| geranyltranstransferase [Vibrio cholerae MZO-2] gi|229339086|gb|EEO04103.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|229349904|gb|EEO14858.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] gi|262032640|gb|EEY51193.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae CT 5369-93] gi|297534590|gb|EFH73427.1| geranyltranstransferase [Vibrio cholerae RC385] gi|327483628|gb|AEA78035.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4] Length = 294 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ Sbjct: 55 QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L T AF I++ + + R ++ +L G QGM GQ LD+ ++ I ++ Sbjct: 115 LQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233 I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD D Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229 >gi|325920751|ref|ZP_08182657.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865] gi|325548803|gb|EGD19751.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865] Length = 291 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 123/197 (62%), Gaps = 5/197 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+R+A+LGG K++R LV +LF+ + + A+E IH YSL+HDDLP+MD Sbjct: 30 RLHAAMRHAVLGGGKRMRPLLVYATGALFDADEDSLDTPAVAVELIHAYSLVHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PTVHI +DE TAI+AG+ L T AFE++++ + ++R + SL G Sbjct: 90 DDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAA--ASVSADLRVGWLQSLASAAGA 147 Query: 157 QGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM GGQ LDI + + + + +KTGAL+ A GA+ A+ +++RL F Sbjct: 148 AGMCGGQALDIDATGQLQSLSDLERMHALKTGALIRAAVRMGALTGGAAHADQQRLDAFA 207 Query: 215 ENLGIIFQLADDLLDCE 231 + LG+ FQ+ DD+LD E Sbjct: 208 DALGLAFQVRDDILDVE 224 >gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6] gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6] Length = 298 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 125/227 (55%), Gaps = 8/227 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76 T LD + ++ + L A+RY +L GGK++R LV A + + ALR Sbjct: 12 TALDQVEIELDRQVPADAPAELGLAMRYGVLDGGKRLRPLLVLAAAGCVDGHPEAALRAA 71 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E IH YSLIHDD+P MDN +RRGKPTVH+QY E A++AG+ + AFE+++ T Sbjct: 72 CAVELIHAYSLIHDDMPCMDNDVLRRGKPTVHVQYGEARAMLAGDAMQALAFEVLTPEDT 131 Query: 137 Q--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFA 192 + ++++L L G+ GM GGQ +D+ + +DE + + KTGAL+ + Sbjct: 132 DDGVPPALQARLCSLLARASGVLGMAGGQAIDLAHVGKQMDEAALQDMHGRKTGALLQAS 191 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 GA + + + L +G +G+ FQ+ DD+LD C E L K Sbjct: 192 VLMGAACGRTTPAQWQALADYGWAIGLAFQVVDDILDVTQCAETLGK 238 >gi|229523313|ref|ZP_04412720.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] gi|229339676|gb|EEO04691.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] Length = 294 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ Sbjct: 55 QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L T AF I++ + + R ++ +L G QGM GQ LD+ ++ I ++ Sbjct: 115 LQTLAFTILAEGTLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233 I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD D Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229 >gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63] gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08] gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07] gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08] gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07] Length = 295 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 79/233 (33%), Positives = 131/233 (56%), Gaps = 11/233 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L+E + ++ +L + + + + +T ++ A+ Y+L GGK++R L E + Sbjct: 7 LKEKASFVEKVLKEYMPKEEGYQKT-----VIEAMNYSLSAGGKRLRPILTLEACKIVGG 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N A+ AIE IH YSLIHDDLP++DN +RRG+PT H Y E I+AG+ LL YA Sbjct: 62 NEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYA 121 Query: 128 FEIISSPKTQLKDNIRSQL--MLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183 FE++ + K+N L + + G+ GM+GGQ++D++ E I++ ++ I Sbjct: 122 FEVMLAGSIN-KENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN 180 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT A+M +GA + A+ + E + + +N+G+ FQ+ DD+LD D K Sbjct: 181 KTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDESK 233 >gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens] gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens] Length = 288 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 118/200 (59%), Gaps = 4/200 (2%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q+ +++ A+RY+LL GGK++R L L N ++ A+E +H SLIHDDL Sbjct: 19 QYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNEEMSMPAACAMEMVHTMSLIHDDL 78 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT H + E TA++AG+ LLTYAFE I+ T + + +++ L Sbjct: 79 PCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLTYAFEHIARDTTGVPADRVLRVIAHLGK 138 Query: 153 NIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 +G +G++ GQ++DI D + + + KT L+ + GAI+ AS++E R Sbjct: 139 AVGSEGLVAGQIVDIASEGDPTVGLETLEYVHTHKTAVLLESSVVCGAILGGASEDEISR 198 Query: 210 LRCFGENLGIIFQLADDLLD 229 L + N+G++FQ+ DD+LD Sbjct: 199 LSKYARNVGLLFQVVDDILD 218 >gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142] gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142] Length = 309 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 89/233 (38%), Positives = 131/233 (56%), Gaps = 17/233 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L S L+E + ++ LD L T +++ A+RY+LL GGK++R L Sbjct: 19 LASYLKEKKQLVEAALDQSLPIT-------RPEKIYEAMRYSLLAGGKRLRPILCLTTCE 71 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L +L A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+ L Sbjct: 72 LMGGTREMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDAL 131 Query: 124 LTYAFEIISSPKTQLKDNIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 L+YAFE ++ TQ ++ + LM L +G G++GGQ+LD++ E + V + Sbjct: 132 LSYAFEYVA---TQTRNVDLANLMDVIARLGRTVGAAGLVGGQVLDLESEGRADVTVDTL 188 Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + + KTGAL+ + SGAI+A A + ERL + +N+G+ FQ+ DD+LD Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDILDV 241 >gi|254285563|ref|ZP_04960527.1| geranyltranstransferase [Vibrio cholerae AM-19226] gi|150424425|gb|EDN16362.1| geranyltranstransferase [Vibrio cholerae AM-19226] Length = 294 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ Sbjct: 55 QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L T AF I++ + + R ++ +L G QGM GQ LD+ ++ I ++ Sbjct: 115 LQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233 I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD D Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229 >gi|149195157|ref|ZP_01872248.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2] gi|149134709|gb|EDM23194.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2] Length = 278 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 80/192 (41%), Positives = 118/192 (61%), Gaps = 10/192 (5%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKP 105 L GGK+ R L+ +N + + A AIE IH YSLIHDDLP+MD+ +RRG P Sbjct: 28 LAGGKRFRPKLLISVVKAYNPLLIDNAKYAAFAIELIHTYSLIHDDLPAMDDATLRRGHP 87 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+H YDE TAI+ G+GL TYAFE++S K + ++I+ +L+ L+ N G+ GM+ GQ + Sbjct: 88 TLHTTYDEATAILVGDGLNTYAFEVLS--KAPIHNDIKIELIKILSENAGVSGMVLGQAI 145 Query: 166 DIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D+ E +DE + I KT L+ + + GAI+ + + E+L FG LG++F Sbjct: 146 DLYFENKKLNLDELKELHIN--KTAKLIAASLKMGAIIVN-KIDLAEKLYDFGIKLGLLF 202 Query: 222 QLADDLLDCEED 233 Q+ DDLLD E++ Sbjct: 203 QIQDDLLDLEDE 214 >gi|56964228|ref|YP_175959.1| geranyltranstransferase [Bacillus clausii KSM-K16] gi|56910471|dbj|BAD64998.1| geranyltranstransferase [Bacillus clausii KSM-K16] Length = 295 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 83/218 (38%), Positives = 131/218 (60%), Gaps = 5/218 (2%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 ++D L + ++ +H RL A+ Y+L GGK++R L+ +N L L Sbjct: 15 LVDKKLPEYVRELEAEH--RLKEAMLYSLEAGGKRVRPVLLLAVLEAYNQPILHGLDTAC 72 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIE +H YSL+HDDLP+MD+ +RRG+PT H + E TAI+AG+ LLT +F +I++ Sbjct: 73 AIEMVHTYSLVHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDALLTQSFALIANADAP 132 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACES 195 L + ++ +L+ G GM+GGQ+ D+ E T Q+ + K KTG L+ F+ E+ Sbjct: 133 LSAKTKVSIIAALSKAAGASGMVGGQLADMFAEGKQLTVEQLANVHKRKTGELLAFSIEA 192 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GA++A S E+ +L FG+ +G++FQ+ DD+LD E D Sbjct: 193 GALIAGVSNEERSKLNEFGQEIGLLFQIKDDILDVEGD 230 >gi|15640906|ref|NP_230537.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|153823688|ref|ZP_01976355.1| geranyltranstransferase [Vibrio cholerae B33] gi|229510825|ref|ZP_04400304.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229517946|ref|ZP_04407390.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229608524|ref|YP_002879172.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|254848025|ref|ZP_05237375.1| geranyltranstransferase [Vibrio cholerae MO10] gi|255744681|ref|ZP_05418632.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262161186|ref|ZP_06030297.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1] gi|9655345|gb|AAF94052.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126518791|gb|EAZ76014.1| geranyltranstransferase [Vibrio cholerae B33] gi|229344661|gb|EEO09635.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229350790|gb|EEO15731.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229371179|gb|ACQ61602.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|254843730|gb|EET22144.1| geranyltranstransferase [Vibrio cholerae MO10] gi|255737712|gb|EET93106.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262028936|gb|EEY47589.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1] Length = 294 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ Sbjct: 55 QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L T AF I++ + + R ++ +L G QGM GQ LD+ ++ I ++ Sbjct: 115 LQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELET 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233 I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD D Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229 >gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis NIES-39] Length = 316 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 82/231 (35%), Positives = 130/231 (56%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L + + ++ LD + + + +++ ++RY+L+ GGK++R L Sbjct: 26 LSTYLSQKKELVEAALD-------AAITVTYPEKIYESMRYSLMAGGKRLRPTLCLATCE 78 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L A+ A+E IH SLIHDDLP+MDN RRGK T H Y + AI+AG+GL Sbjct: 79 LLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGL 138 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 L+YAFE +++ + Q++ L +G G++GGQ++DI E + E + I Sbjct: 139 LSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLTFI 198 Query: 181 QKMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ C C GAI+A A++ + ERL + +N+G+ FQ+ DD+LD Sbjct: 199 HTHKTGALLEACVVC--GAILAGANETDLERLSRYAKNIGLAFQIVDDILD 247 >gi|153216011|ref|ZP_01950233.1| geranyltranstransferase [Vibrio cholerae 1587] gi|124114524|gb|EAY33344.1| geranyltranstransferase [Vibrio cholerae 1587] Length = 294 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ Sbjct: 55 QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L T AF I++ + + R ++ +L G QGM GQ LD+ ++ I ++ Sbjct: 115 LQTLAFTILAEGTLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233 I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD D Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229 >gi|224373694|ref|YP_002608066.1| geranyltranstransferase [Nautilia profundicola AmH] gi|223588370|gb|ACM92106.1| geranyltranstransferase [Nautilia profundicola AmH] Length = 281 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 117/187 (62%), Gaps = 5/187 (2%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKP 105 L GGK+ R L+ + + + A AIE IH YSLIHDDLP+MDN +RRG P Sbjct: 28 LAGGKRFRPKLLLSVVKAYEPLLVENAKYAAYAIELIHTYSLIHDDLPTMDNADLRRGHP 87 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+H+ YDE+TA++AG+ L TYAFE++S K+ +++ +L+ L+ N G GM+ GQ + Sbjct: 88 TLHVTYDEITALLAGDALNTYAFEVLS--KSPFSSDVKIELIKILSENAGAGGMVLGQAI 145 Query: 166 D--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D +++ ++ ++ + KT L+ + + GA++ + + +E+L FG +LGI+FQ+ Sbjct: 146 DCYFENKKLNLDELKFLHLNKTAKLIAASLQMGAVIVNLDKKLQEKLYNFGIDLGILFQV 205 Query: 224 ADDLLDC 230 DD+LD Sbjct: 206 QDDILDV 212 >gi|121588137|ref|ZP_01677884.1| geranyltranstransferase [Vibrio cholerae 2740-80] gi|121728346|ref|ZP_01681376.1| geranyltranstransferase [Vibrio cholerae V52] gi|147674651|ref|YP_001216368.1| geranyltranstransferase [Vibrio cholerae O395] gi|153817233|ref|ZP_01969900.1| geranyltranstransferase [Vibrio cholerae NCTC 8457] gi|227081066|ref|YP_002809617.1| geranyltranstransferase [Vibrio cholerae M66-2] gi|229505505|ref|ZP_04395015.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|262168689|ref|ZP_06036384.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] gi|298498988|ref|ZP_07008795.1| geranyltranstransferase [Vibrio cholerae MAK 757] gi|121547628|gb|EAX57727.1| geranyltranstransferase [Vibrio cholerae 2740-80] gi|121629401|gb|EAX61831.1| geranyltranstransferase [Vibrio cholerae V52] gi|126512267|gb|EAZ74861.1| geranyltranstransferase [Vibrio cholerae NCTC 8457] gi|146316534|gb|ABQ21073.1| geranyltranstransferase [Vibrio cholerae O395] gi|227008954|gb|ACP05166.1| geranyltranstransferase [Vibrio cholerae M66-2] gi|227012710|gb|ACP08920.1| geranyltranstransferase [Vibrio cholerae O395] gi|229357728|gb|EEO22645.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|262022807|gb|EEY41513.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] gi|297543321|gb|EFH79371.1| geranyltranstransferase [Vibrio cholerae MAK 757] Length = 294 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ Sbjct: 55 QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L T AF I++ + + R ++ +L G QGM GQ LD+ ++ I ++ Sbjct: 115 LQTLAFTILAEGDLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233 I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD D Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229 >gi|326803324|ref|YP_004321142.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a] gi|326650194|gb|AEA00377.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a] Length = 299 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 124/213 (58%), Gaps = 3/213 (1%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76 +I DL +H+ D LL+++RY+L GGK++R L+ + FN ++ L Sbjct: 9 SIDKDLEAALIAHLGQDSQDSLLASMRYSLENGGKRLRPSLLLATLASFNYDYHLGLAPA 68 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E IH YSLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ LLT AFE++S + Sbjct: 69 CAVEYIHTYSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDALLTLAFEVLSQSQE 128 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACE 194 + ++ +L+ L G GM+ GQ+LD+ E T ++ + KTGAL+ FA Sbjct: 129 ETDPQLKLELVQLLAQAAGKSGMVDGQVLDMSSEEKHLTIEELKNLHGKKTGALIHFAIM 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + A++ Q ++ L + + GI +Q+ +DL Sbjct: 189 AAALIMDLDQAAQDSLASYAHHFGIAYQIQNDL 221 >gi|15602398|ref|NP_245470.1| hypothetical protein PM0533 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720796|gb|AAK02617.1| IspA [Pasteurella multocida subsp. multocida str. Pm70] Length = 295 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 123/199 (61%), Gaps = 8/199 (4%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RY LLGGK+IR FLV + + A++E +H YSLIHDDLP+MD+ Sbjct: 32 LAEAMRYGVLLGGKRIRPFLVYATGRMLGADLNQLDYAAASVEAVHAYSLIHDDLPAMDD 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 ++RRG+PT HI +D TAI+AG+ L +AFEI++ +P Q + + L+ +L+ G+ Sbjct: 92 DHLRRGQPTCHIAFDHATAILAGDALQAFAFEILTQAPALQAEQKLA--LVQTLSQAAGV 149 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KERLRC 212 +GM GQ LD+ + + I ++ I + KTGA++ A + G I + +N+ ++L+ Sbjct: 150 KGMCLGQSLDLISEQKHISLIELEQIHRNKTGAMLSAAIQLGRICSPHFKNDTLAQQLQR 209 Query: 213 FGENLGIIFQLADDLLDCE 231 + E +G+ FQ+ DD+LD E Sbjct: 210 YSEAIGLAFQVQDDILDIE 228 >gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 293 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 87/234 (37%), Positives = 128/234 (54%), Gaps = 19/234 (8%) Query: 19 ILDDLLLQTASHMQTQHN---------DRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 + DD+L++ ++ N + L A+RY++ GGK++R L L + Sbjct: 1 MFDDILMEKIEYINNGLNKLLDIDDKPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGD 60 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+ LL Y F Sbjct: 61 RDDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGF 120 Query: 129 EIISSPKTQLKDNIRSQLMLSLT----HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQK 182 E++ D+ Q +L T H G GM+GGQ++D+ +++ I E ++ + Sbjct: 121 EVLIH---HALDSANCQNILRATEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHD 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTGAL+ + +GAIM A ++L + E +G+ FQ+ DD+LD D K Sbjct: 178 HKTGALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESK 231 >gi|209694502|ref|YP_002262430.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238] gi|208008453|emb|CAQ78619.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238] Length = 298 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 120/200 (60%), Gaps = 5/200 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A++YALL GGK+ R +LV A++ ++ A AA+ECIH YSLIHDDLP+MDN Sbjct: 34 LTDAMKYALLLGGKRARPYLVYITANMLGIDSEHADAPAAAVECIHSYSLIHDDLPAMDN 93 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156 +RRG T HI++DE TAI+AG+ L T AFEI+++ + ++ R ++ L+ G Sbjct: 94 DDLRRGHATCHIKFDEATAILAGDALQTLAFEILANGTLAEEAESSRIDMIRVLSKASGA 153 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCF 213 GM GQ LD+Q E +D + I KTGALM A + GA+ A + +L + Sbjct: 154 SGMCMGQSLDLQAEGKQVDLLSLEQIHANKTGALMKSAIQLGALCAGEKGKQILPQLEKY 213 Query: 214 GENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD D Sbjct: 214 ADAIGLAFQVQDDILDITSD 233 >gi|167645671|ref|YP_001683334.1| polyprenyl synthetase [Caulobacter sp. K31] gi|167348101|gb|ABZ70836.1| Polyprenyl synthetase [Caulobacter sp. K31] Length = 303 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 114/198 (57%), Gaps = 4/198 (2%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 DRL+ A+RY LL GK+ R + A+ +AL A E IH SLI DDLP+M Sbjct: 40 DRLVEAVRYCLLAPGKRFRPMVTLLAAAECGAPEGSALDAACAFEMIHAASLILDDLPAM 99 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRG PT+H +DE TAI+AG GLL A+ +I++ + L ++R++L H +G Sbjct: 100 DDAGLRRGLPTIHRAFDEATAILAGVGLLNQAYAVIAADQG-LPGSLRAELTARAAHAVG 158 Query: 156 LQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G++ GQ D+ +D+ D + + KTG L+ A + GA++A A + E F Sbjct: 159 FSGLIAGQARDLFDRDQIRDPAALERLNHEKTGVLIIAAAQGGALVAGAPEATVEAFGTF 218 Query: 214 GENLGIIFQLADDLLDCE 231 ++G+ FQ+ DDL+D + Sbjct: 219 ARHIGLAFQIRDDLIDAQ 236 >gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599] gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599] Length = 322 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 112/205 (54%), Gaps = 8/205 (3%) Query: 37 DRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 DRL A+RYA+LGG K++R LV L + A+E IH YSL+HDD+P+M Sbjct: 53 DRLHEAMRYAVLGGGKRVRPLLVYAAGELVGADARVLDGAACAVELIHVYSLVHDDMPAM 112 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP----KTQLKDNIRSQLMLSLT 151 DN +RRGKPTVH QY E A++ G+ L AFE++ +P Q + ++ L Sbjct: 113 DNDDMRRGKPTVHRQYGEAMAMLVGDALQALAFEVLVAPLVEADPQAARVPAATMVAVLA 172 Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKE 208 G GM GGQ LDI+ + Q+ + + KTGA++ + E G + S + E Sbjct: 173 RAAGSWGMAGGQALDIEGVGLRLSRPQLEAMHRAKTGAMLSVSVELGLLAGGQPSADLAE 232 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 ++ +G +G+ FQ+ DD+LD D Sbjct: 233 AMQRYGRAIGLAFQVVDDILDVTAD 257 >gi|310814826|ref|YP_003962790.1| geranylgeranyl pyrophosphate synthetase [Ketogulonicigenium vulgare Y25] gi|308753561|gb|ADO41490.1| geranylgeranyl pyrophosphate synthetase [Ketogulonicigenium vulgare Y25] Length = 290 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 91/228 (39%), Positives = 135/228 (59%), Gaps = 10/228 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQT-QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 +Q S R+ D+ A+H+ + SA+ YA GGK +R FLV E A L + Sbjct: 1 MQSLSTRMAAAAADVQALIAAHLSPLAAASPVASAMIYACTGGKGLRGFLVLESARLHGI 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AL V AA+E +H YSL+HDD+P+MD+ +RRG+PTVH Q+DE TA++AG+ L + Sbjct: 61 AYADALPVAAAVEAVHAYSLVHDDMPAMDDDDLRRGRPTVHRQWDEATALLAGDALQSLG 120 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKM 183 FE+I++ L D+ R L+ G+ GM+GGQ DI E Q+ +Q+ Sbjct: 121 FELIAT--AALPDSARVTLLAGFARAAGIHGMVGGQEADIAAETAARPLSLDQIIALQRG 178 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 KTGAL+ ++ +GA+MA A + LR FG+ +G+ FQ+ DD+LD E Sbjct: 179 KTGALITWSASAGAVMAGA---DAAPLRAFGDAIGLAFQITDDILDVE 223 >gi|15606136|ref|NP_213513.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5] gi|6225572|sp|O66952|ISPA_AQUAE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|2983323|gb|AAC06913.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5] Length = 262 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 82/221 (37%), Positives = 123/221 (55%), Gaps = 12/221 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA 72 +RI+T + + + ++ + + L+ A++Y L GK+IR AS N A Sbjct: 2 ERIETWKEKIEKRLNEILKPEGPEELIEAMKYYPLQKGKRIRPLFTVAVASALGGNEDDA 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + VG+ IE IH YSLIHDDLP MDN RRG PT HI++ E A++AG+ LLTY FE++S Sbjct: 62 ITVGSGIELIHNYSLIHDDLPCMDNDVWRRGLPTCHIKFGEAMALLAGDALLTYTFEVLS 121 Query: 133 SPKTQLKDNIRSQLMLS--LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM- 189 + + L ++ + G GM+GGQ+LDI+ ++ + KTGAL Sbjct: 122 QRENYKTLSCEEILEINKIIAQKAGSNGMVGGQVLDIK----GYEDLYEVSVKKTGALFE 177 Query: 190 -CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 CF C GA++A + KE + G +G++FQ+ DD LD Sbjct: 178 ACFMC--GAVVAKRREKLKE-MESIGRKVGLLFQMVDDYLD 215 >gi|289207601|ref|YP_003459667.1| polyprenyl synthetase [Thioalkalivibrio sp. K90mix] gi|288943232|gb|ADC70931.1| Polyprenyl synthetase [Thioalkalivibrio sp. K90mix] Length = 297 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 88/232 (37%), Positives = 129/232 (55%), Gaps = 9/232 (3%) Query: 6 PSK-LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 PS+ L+ +RI+T+LD L + + RL+ A+RYA L GGK++R LV + Sbjct: 6 PSEALKAYQRRIETVLDQRLAA-----DSAPDPRLIEAMRYATLSGGKRLRPVLVYAAGA 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + AA+E +H YSLIHDDLP+MDN +RRG+PT H +DE TAI+AG+ L Sbjct: 61 TCGAPDDVLDAMAAAVEMVHVYSLIHDDLPAMDNDDLRRGRPTCHRAFDEATAILAGDAL 120 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 AFEI+++ L + L H GL GM GGQ +D+ + ID ++ + Sbjct: 121 QACAFEIMTAGVRALPGTAALDALAELAHAAGLHGMAGGQAIDLGACGKPIDLAELERMH 180 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++KTGAL+ + GAI + L + E +G+ FQ+ DD+LD E D Sbjct: 181 RLKTGALIRVSVRLGAIAGGVPGDALGHLTRYAECIGLAFQIRDDVLDVEGD 232 >gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61] gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3] gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52] gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61] gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3] gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52] Length = 297 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 114/197 (57%), Gaps = 4/197 (2%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ Y+L GGK+IR L+ + L V AIE IH YSLIHDDLPSMDN Sbjct: 34 LKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDN 93 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPT H + E AI+AG+ LLTYAF++++ ++ +R QL+ L G Sbjct: 94 DDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLMAEIDDDRVPPPVRLQLIEQLAKAAGP 153 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM+ GQ D++ E + ++ I + KTG ++ ++ +GA++ A + L F Sbjct: 154 EGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFA 213 Query: 215 ENLGIIFQLADDLLDCE 231 +LG+ FQ+ DD+LD E Sbjct: 214 AHLGLAFQIRDDILDIE 230 >gi|188996777|ref|YP_001931028.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931844|gb|ACD66474.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 287 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/196 (43%), Positives = 124/196 (63%), Gaps = 7/196 (3%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLP 93 + L +A+RY+L GGK+IR LV ECA +VN + + + E IH YSLIHDDLP Sbjct: 28 EELSNAMRYSLEAGGKRIRPILVIECAKAVKEDVNVEDFIDIAISTEFIHTYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E AI+AG+GLLT+AFE+IS+ K + I + + L+HN Sbjct: 88 AMDDDDLRRGKPTCHKVFGEAIAILAGDGLLTFAFELISNNKKLSAEKIVKVINI-LSHN 146 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G+ GM+GGQ DI F D V I KT + C+ G ++A A++ E +L+ + Sbjct: 147 VGIYGMVGGQAADILPNFKD---VEFIHLNKTAKFLSACCQIGCVLADATEEEILKLKNY 203 Query: 214 GENLGIIFQLADDLLD 229 G N+G+ FQ+ DD+LD Sbjct: 204 GINIGLAFQIWDDILD 219 >gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330] Length = 295 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 5/214 (2%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82 +LQT + L A+RY+ L GGK++R LV + L N AA+ECI Sbjct: 18 ILQTVLPISQVAPQTLHEAMRYSTLDGGKRLRPLLVLAASELGNQVQAACEAAMAAVECI 77 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H YSL+HDD+P+MDN +RRGKPT H+Q+ E TA++ G+ L T AF+I+S+ +T+L Sbjct: 78 HVYSLVHDDMPAMDNDSLRRGKPTCHVQFGEATALLVGDALQTLAFDILST-ETELSTVR 136 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMA 200 + +++ L G GM GGQ +D+ + D +T++ + +KTGAL+ A G + Sbjct: 137 QLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQTELEFMHSLKTGALIRAAVALGGLSC 196 Query: 201 HASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 +E+ L + LG+ FQ+ DD+LDCE D Sbjct: 197 PDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEAD 230 >gi|15676185|ref|NP_273317.1| geranyltranstransferase [Neisseria meningitidis MC58] gi|7225485|gb|AAF40715.1| geranyltranstransferase [Neisseria meningitidis MC58] Length = 259 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 81/195 (41%), Positives = 112/195 (57%), Gaps = 5/195 (2%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 +RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN +R Sbjct: 1 MRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLR 60 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RGKPT HI+Y E TA++ G+ L T AF+++S P T+L + ++ L G +GM G Sbjct: 61 RGKPTCHIKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAG 119 Query: 162 GQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLG 218 GQ +D+ + Q + Q +KTGAL+ A GA S E L + LG Sbjct: 120 GQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLG 179 Query: 219 IIFQLADDLLDCEED 233 + FQ+ DD+LDCE D Sbjct: 180 LAFQVIDDVLDCEAD 194 >gi|295698395|ref|YP_003603050.1| geranyltranstransferase [Candidatus Riesia pediculicola USDA] gi|291157112|gb|ADD79557.1| geranyltranstransferase [Candidatus Riesia pediculicola USDA] Length = 302 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/231 (35%), Positives = 129/231 (55%), Gaps = 7/231 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + SK I ++D+L+Q Q H + L++ IRY + GKKIRS + S+ V+ Sbjct: 9 FHQKSKIIKKQVNDILMQKVRSFQKIHRN-LINVIRYIIFEGKKIRSCFIYSVGSMLKVS 67 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 ++ A++EC+H YSLIHDDLPSMDN IRR K + HI + E AI+AGN L AF Sbjct: 68 CKQISKIAASVECMHAYSLIHDDLPSMDNDDIRRNKKSCHIVFGEANAILAGNALQALAF 127 Query: 129 E-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E ++S + L Q++ LT G++G+ GGQ LDI + + ++ + Sbjct: 128 ELLLSLNRKNLDHKSHLQIIRELTIAGGIKGICGGQSLDISKKKRCHMNIELLNIIYFYK 187 Query: 188 LMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233 + S ++ +AS+ E+ L + EN+G++FQ+ADDL+D ++D Sbjct: 188 TVSLIRASIRMIFYASRYRYEKKLILILDDYSENIGLLFQIADDLIDFKKD 238 >gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs] gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs] Length = 295 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 126/216 (58%), Gaps = 4/216 (1%) Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L+ +M+ +N L+ +++Y+L GGK++R L +F + + IE IH Sbjct: 18 LKDYFNMKEGYNQTLIESMKYSLFAGGKRLRPILSLASYQMFRDDIEEVMPYACGIEMIH 77 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP+MDN RRGK T H Y+E AI+AG+GLL Y+FE++ + D + Sbjct: 78 TYSLIHDDLPAMDNDDYRRGKLTNHKVYNEGVAILAGDGLLNYSFELMLENAIKQNDIYK 137 Query: 144 SQLML-SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA 200 + + ++++ G+ GM+GGQ++D++ E ID+ + I KT AL+ + + GAI+A Sbjct: 138 HIVAIKEISNSAGVHGMIGGQVVDLESENKIIDKEMLDYIHINKTAALITTSLKVGAIIA 197 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + + + G NLG+ FQ+ DD+LD D K Sbjct: 198 GAQEEDIRNMEKVGLNLGLAFQIKDDILDVVGDEAK 233 >gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18] gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18] Length = 295 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 115/197 (58%), Gaps = 4/197 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RY++ GGK++R L+ + + A+E IH YSLIHDDLP+MDN Sbjct: 32 LHGAMRYSVFAGGKRVRPVLMLAACEAVGGSPQAVMPAACAMEMIHTYSLIHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG PT H Y E TAI+AG+ LLT AF ++S+ R +++ + G + Sbjct: 92 DDFRRGNPTNHKVYGEATAILAGDALLTEAFILLSANGEGGDPAARLRVIQEIAVASGSR 151 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ++D++ E +D + I KTGAL+ + SGAIM AS+ + + L + Sbjct: 152 GMVGGQVVDMESEGRHDVDLATLSYIHTHKTGALIRASVRSGAIMGGASEEQFKALTRYA 211 Query: 215 ENLGIIFQLADDLLDCE 231 + +G+ FQ+ADD+LD E Sbjct: 212 DAIGLAFQIADDILDVE 228 >gi|220929321|ref|YP_002506230.1| polyprenyl synthetase [Clostridium cellulolyticum H10] gi|219999649|gb|ACL76250.1| Polyprenyl synthetase [Clostridium cellulolyticum H10] Length = 294 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 77/193 (39%), Positives = 116/193 (60%), Gaps = 3/193 (1%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+LL GGK++R L A +F+ + G AIE IH YSLIHDDLP+MDN Sbjct: 35 AMSYSLLAGGKRLRPVLALAVAEMFDKPFDEVINFGCAIEMIHTYSLIHDDLPAMDNDDY 94 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGK T H + E AI+AG+GLL A+EI+ + + ++ + + + G GM+ Sbjct: 95 RRGKLTNHKVFGEAMAILAGDGLLNMAYEIMINDAVESRNIEKMRAAGIVAKYAGALGMV 154 Query: 161 GGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQ++D+Q E I+ ++ + ++KTGAL+ E+ A++ A + E E L + NLG Sbjct: 155 GGQVIDLQSEEKTIESDRLKTMHRLKTGALIKAPVEAAAVICGADKKEFELLSGYAANLG 214 Query: 219 IIFQLADDLLDCE 231 + FQ+ DD+LD E Sbjct: 215 LAFQIKDDILDIE 227 >gi|323144187|ref|ZP_08078822.1| geranyltranstransferase [Succinatimonas hippei YIT 12066] gi|322416028|gb|EFY06727.1| geranyltranstransferase [Succinatimonas hippei YIT 12066] Length = 294 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 3/194 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ Y L LGGK+ R LV + + AA+ECIH YSLIHDD+P MDN Sbjct: 32 LKEAMSYGLILGGKRSRPLLVYATGKALGASDASLDYAAAAVECIHAYSLIHDDMPEMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG PTVH ++ + TA++AG+ L T FE S + L +R +L L G Sbjct: 92 DELRRGHPTVHKKFGQATALLAGDALQTLGFEFASDKNSGLSGELRGELCAVLAKGAGFS 151 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM GGQ +D+ E I ++ ++ KTGAL+ A GA+ A A + K L + Sbjct: 152 GMCGGQAMDLDAEGKHIPLERLRVLHSKKTGALIRVAVAMGAVCADADEKTKAVLDEYAA 211 Query: 216 NLGIIFQLADDLLD 229 G+ FQ+ DD+LD Sbjct: 212 LTGLAFQVWDDVLD 225 >gi|304415488|ref|ZP_07396128.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1] gi|304282658|gb|EFL91181.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1] Length = 313 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 10/221 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 +R+D L + + SH + +L+ AIRY +L GGK+IR +LV +F ++ + Sbjct: 19 RRVDEKLKNFIQPLPSHSR-----QLIEAIRYTVLCGGKRIRPYLVYATGKMFGLSPGSL 73 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+ECIH YSL+HDDLP+MD+ +RRG+P+ HI++ E AI+AG+ L T AF +++ Sbjct: 74 DVAAAAVECIHAYSLVHDDLPAMDDDNLRRGQPSCHIKFGEAIAILAGDALQTLAFSLLA 133 Query: 133 -SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 P + R +++ L IG GM GQ LD+ E I + I + KTGAL+ Sbjct: 134 DQPMPNVTLENRLKIVSELAKAIGAGGMCAGQALDLAAEHCQISLASLEKIHRHKTGALI 193 Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLD 229 A GA+ A S+ L + + +G+ FQ+ DD+LD Sbjct: 194 RAAVRIGALAAGERSEKTLSLLDDYADAIGLAFQVQDDILD 234 >gi|88607980|ref|YP_506571.1| putative geranyltranstransferase [Neorickettsia sennetsu str. Miyayama] gi|88600149|gb|ABD45617.1| putative geranyltranstransferase [Neorickettsia sennetsu str. Miyayama] Length = 256 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/226 (38%), Positives = 123/226 (54%), Gaps = 25/226 (11%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66 KLQ+ S+ I L + L S D+L AIRY+LL IR FLV E +LFN Sbjct: 6 KLQKASRLIRETLKENLSLFPSE------DKLFQAIRYSLLAESSHIRGFLVLELGTLFN 59 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + ++ + V AAIE IH +SLIHDDLP++DN RR +P HI + E TAI+AG+ LL Sbjct: 60 IPYVDTIEVAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVL 119 Query: 127 AFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 A++++S +P Q +++ H++ +G L DE I KM Sbjct: 120 AYQMLSRYGTPLVQCTSKYVLEMITGQVHDV-----IGSSTL-TADE---------INKM 164 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K+G+L +C S +A++ Q+E L FG +GIIFQ DD+ D Sbjct: 165 KSGSLFALSCSSVGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210 >gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC 51196] gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC 51196] Length = 300 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 13/201 (6%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDN 97 AIR++ GGK++R L E A + V GAAIE +H YSLIHDDLP++DN Sbjct: 39 AIRHSTFAGGKRLRPVLAMEAARTLRRDRALPAGVEDLGAAIEMLHTYSLIHDDLPALDN 98 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNI 154 +RRGKPT H+ + E AI+AG+ L T A++ ++ P + IR L+ T + Sbjct: 99 DDLRRGKPTCHVVFGEAIAILAGDALQTLAYQTLAQLRCPAPATVEIIR--LIAEATGTV 156 Query: 155 GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 +GM+GGQ+LD++ E T V I + KTGAL+ + +G + A A+ + ERL Sbjct: 157 --EGMIGGQVLDLEGEGTRPTAESVDAIHRAKTGALIRVSIVTGGVYAGATPEDVERLTI 214 Query: 213 FGENLGIIFQLADDLLDCEED 233 FG G+ FQ+ DD+LD +D Sbjct: 215 FGRKAGLAFQIVDDVLDMTQD 235 >gi|221640630|ref|YP_002526892.1| Farnesyl-diphosphate synthase [Rhodobacter sphaeroides KD131] gi|221161411|gb|ACM02391.1| Farnesyl-diphosphate synthase [Rhodobacter sphaeroides KD131] Length = 289 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 127/202 (62%), Gaps = 8/202 (3%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 ++ A+RYA+ GGK++R FLV E A L + A+ A+IE +H YSL+HDD+P MD+ Sbjct: 30 VVHAMRYAVQGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDD 89 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG PTVH ++DE TA++AG+ L T AFE+++ P +R +L+ SL G +G Sbjct: 90 DLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-SAEVRIELVASLAKASGAEG 148 Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M+ GQ LDI E + Q+ +Q KTGAL+ ++ E+GAI+ Q ++ LR + Sbjct: 149 MVLGQALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAIL---GQADRVPLRRYA 205 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 LG+ FQ+ADD+LD E D K Sbjct: 206 TALGLAFQIADDILDVEGDAEK 227 >gi|126463556|ref|YP_001044670.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17029] gi|332559609|ref|ZP_08413931.1| polyprenyl synthetase [Rhodobacter sphaeroides WS8N] gi|126105220|gb|ABN77898.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17029] gi|332277321|gb|EGJ22636.1| polyprenyl synthetase [Rhodobacter sphaeroides WS8N] Length = 289 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 127/202 (62%), Gaps = 8/202 (3%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 ++ A+RYA+ GGK++R FLV E A L + A+ A+IE +H YSL+HDD+P MD+ Sbjct: 30 VVHAMRYAVQGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDD 89 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG PTVH ++DE TA++AG+ L T AFE+++ P +R +L+ SL G +G Sbjct: 90 DLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAEVRIELVASLAKASGAEG 148 Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M+ GQ LDI E + Q+ +Q KTGAL+ ++ E+GAI+ Q ++ LR + Sbjct: 149 MVLGQALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAIL---GQADRVPLRRYA 205 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 LG+ FQ+ADD+LD E D K Sbjct: 206 TALGLAFQIADDILDVEGDAEK 227 >gi|291520797|emb|CBK79090.1| Geranylgeranyl pyrophosphate synthase [Coprococcus catus GD/7] Length = 303 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 87/234 (37%), Positives = 132/234 (56%), Gaps = 13/234 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L +L+E + I+ +L+ +L + A +T + SA+RY+L+ GGK+IR L+ E Sbjct: 3 LEQELKEKTADIEKLLERMLPEEAGLQKT-----IFSAMRYSLMAGGKRIRPLLIAETYR 57 Query: 64 LFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + A AAIE IH YSLIHDDLP++DN RRG+ T H Y E AI+AG+ Sbjct: 58 FFGGTDMALAEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRLTSHKVYGEAMAILAGDA 117 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 LL YAFE S +D+ ++ L+ G+ GM+GGQ++D++ + I E Sbjct: 118 LLNYAFETASKAMDHARDDEELLRVMKAFRILSSKPGINGMIGGQVVDVELTGKPIPEKT 177 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + I ++KTGAL+ A GA +A AS + + ++G+ FQ+ DD+LD Sbjct: 178 LRFIFELKTGALIEAAMMIGAQLAGASDEQIAAVEKAAGDIGMAFQIQDDVLDV 231 >gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab] gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab] Length = 297 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 115/199 (57%), Gaps = 3/199 (1%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + +R+ A+RY+LL GGK++R L L + A+ A+E IH SLIHDDLP Sbjct: 31 YPERIYEAMRYSLLAGGKRLRPILCLAACELAGGSVEQAMPTACALEMIHTMSLIHDDLP 90 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRGKPT H + E AI+AG+ LL YAFE I+S + + Q++ + H Sbjct: 91 AMDNDDFRRGKPTNHKVFGEDIAILAGDALLAYAFEHIASQTRGVPPQLVLQVIARIGHA 150 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + G++GGQ++D++ E I + I KTGAL+ + SG I+A A + RL Sbjct: 151 VAATGLVGGQVVDLESEGKAISLETLEYIHSHKTGALLEASVVSGGILAGADEELLARLS 210 Query: 212 CFGENLGIIFQLADDLLDC 230 + ++G+ FQ+ DD+LD Sbjct: 211 HYARDIGLAFQIVDDILDV 229 >gi|121634131|ref|YP_974376.1| geranyltranstransferase [Neisseria meningitidis FAM18] gi|120865837|emb|CAM09569.1| geranyltranstransferase [Neisseria meningitidis FAM18] gi|325143100|gb|EGC65447.1| geranyltranstransferase [Neisseria meningitidis 961-5945] gi|325143170|gb|EGC65516.1| geranyltranstransferase [Neisseria meningitidis 961-5945] gi|325197545|gb|ADY93001.1| geranyltranstransferase [Neisseria meningitidis G2136] Length = 298 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 113/199 (56%), Gaps = 5/199 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN Sbjct: 36 LHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDN 95 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPT HI+Y E A++ G+ L T AF+++S P T+L + ++ L G + Sbjct: 96 DSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSR 154 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFG 214 GM GGQ +D+ + Q + Q +KTGAL+ A GA S E L + Sbjct: 155 GMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYA 214 Query: 215 ENLGIIFQLADDLLDCEED 233 LG+ FQ+ DD+LDCE D Sbjct: 215 AKLGLAFQVIDDVLDCEAD 233 >gi|291519198|emb|CBK74419.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens 16/4] Length = 305 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 6/198 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + A++Y++ GGK++R L+ E +LF AAIE IH YSL+HDDLP+MDN Sbjct: 40 IFDAMQYSVTAGGKRLRPILMNETFTLFGGEGDVIEPFMAAIELIHTYSLVHDDLPAMDN 99 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGL 156 +RRGKPT H Y E ++AG+ LL YAFE + D +R ++ M L G+ Sbjct: 100 DSLRRGKPTTHAVYGEAMGVLAGDALLNYAFETALNAYDADIDTVRVTEAMRILARKAGV 159 Query: 157 QGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM+GGQ++D++ E + + ++ I ++KTGAL+ A GA++A A++ + + Sbjct: 160 FGMIGGQVVDVESEKKQLEMTKEKIDFIYELKTGALIEAAMMIGAVLAGATEQQVTTVEN 219 Query: 213 FGENLGIIFQLADDLLDC 230 + +G+ FQ+ DD+LD Sbjct: 220 VAKKIGLAFQIQDDILDV 237 >gi|188534651|ref|YP_001908448.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99] gi|188029693|emb|CAO97572.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99] Length = 299 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 118/202 (58%), Gaps = 9/202 (4%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++AI Y ALLGGK++R FLV ++ + + AA+ECIH YSLIHDDLP+MDN Sbjct: 32 LVNAIEYGALLGGKRLRPFLVYATGNMLHADDAALDAPAAAVECIHAYSLIHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E AI+AG+ L T AF I++ +P + R ++ L G+ Sbjct: 92 DSLRRGQPTCHIKFGEDAAILAGDALQTLAFSILADAPMPGVTAESRVAMLSELAQASGV 151 Query: 157 QGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLR 211 GM GGQ LD+ E +DE + I + KTGAL+ A GA+ A A L Sbjct: 152 AGMCGGQALDLAAEGKRVTLDELE--QIHRHKTGALIRSAVRLGALSAGAPGRAALPALD 209 Query: 212 CFGENLGIIFQLADDLLDCEED 233 F + +G+ FQ+ DD+LD D Sbjct: 210 RFADAIGLAFQVQDDILDVIGD 231 >gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801] gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802] gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801] gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802] Length = 309 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 90/242 (37%), Positives = 132/242 (54%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N L S L++ + ++ LD L T + + A+RY+LL GGK++R L Sbjct: 16 NFDLASYLKDKQQLVEAALDRSLAIT-------RPETIYEAMRYSLLAGGKRLRPILCLT 68 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L AL A+E IH SLIHDDLP+MDN RRGK T H +Y E AI+AG Sbjct: 69 TCELLGGTLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKYGEDIAILAG 128 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177 +GLL YAFE ++ + + ++ L +G G++GGQ+LD++ E + V Sbjct: 129 DGLLAYAFEYAATQTRNVDPHNLINVLGRLGRTVGPAGLVGGQVLDLESEGKPDITVDTL 188 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDL 234 I KTGAL+ + SGAI+A S + +RL + +N+G+ FQ+ DD+LD +E+L Sbjct: 189 KFIHTHKTGALLETSVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDDILDITSTQEEL 248 Query: 235 PK 236 K Sbjct: 249 GK 250 >gi|323705302|ref|ZP_08116877.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535204|gb|EGB24980.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 293 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 83/211 (39%), Positives = 120/211 (56%), Gaps = 10/211 (4%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T + L A++Y++ GGK++R L L N AL V AIE IH YSLIHDD Sbjct: 24 TDRPEVLFEAMKYSVFAGGKRLRPVLCISACELVGGNKEDALPVACAIEFIHTYSLIHDD 83 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MDN +RRGKPT H Y E AI+AG+ LL Y FE++ Q ++ +SQ +L Sbjct: 84 LPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGFEVLIQ---QALNSNKSQNILKAA 140 Query: 152 HNI----GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 I G +GM+ GQ++D+ +++ I E + + KTGAL+ + +GAI+ A Sbjct: 141 DEIARAAGCRGMIAGQVVDLLSENKEIGEYDLKFMHDHKTGALIKASILAGAIIGGADAA 200 Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++L + E LG FQ+ DD+LD + D K Sbjct: 201 TLKKLSSYAEYLGFAFQVKDDILDVQGDEAK 231 >gi|239637669|ref|ZP_04678641.1| geranyltranstransferase [Staphylococcus warneri L37603] gi|239596887|gb|EEQ79412.1| geranyltranstransferase [Staphylococcus warneri L37603] Length = 292 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/208 (41%), Positives = 124/208 (59%), Gaps = 7/208 (3%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L ++ Y+L GGK+IR L+ + N ++ ++ A+E IH YSLIHDDLP+ Sbjct: 26 NTNLEESMLYSLNAGGKRIRPVLLLLTLDMLNEDYRQGMQSALALEMIHTYSLIHDDLPA 85 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGK T H Y E AI+AG+ LLT AFE++S + L D + +++ L + Sbjct: 86 MDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSYD-SALCDAKKVKVLQRLAYAS 144 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+GGQ LD+Q D+ ID + + I + KTGAL+ FA S +A ++ L Sbjct: 145 GHLGMVGGQTLDMQSEDKKIDISTLESIHRTKTGALLTFAIMSAVDIADTDEHTSAMLNE 204 Query: 213 FGENLGIIFQLADDLLDC---EEDLPKK 237 F ++LG++FQ+ DDLLD E+ L KK Sbjct: 205 FSDHLGLMFQIKDDLLDIYGDEQKLGKK 232 >gi|150016579|ref|YP_001308833.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052] gi|149903044|gb|ABR33877.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052] Length = 289 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/192 (41%), Positives = 119/192 (61%), Gaps = 12/192 (6%) Query: 45 YAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 Y+L +GGK+IR L++ ++ ++ + + AA+E IH YSLIHDDLP MDN +RRG Sbjct: 34 YSLNIGGKRIRPILLSLTYYIYKEDYRKVIPMAAAMEMIHTYSLIHDDLPCMDNDDLRRG 93 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGM 159 KPT HI++ E A++AG+ LL A I+ + ++N L H I G +GM Sbjct: 94 KPTNHIKFQENIAVLAGDALLNEAMIIMMDYALKSENN-----ALRAAHEIAVAAGAEGM 148 Query: 160 LGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 +GGQ++DI E I + ++ + KTGAL+ A SGAI+A A +++ LR +GE L Sbjct: 149 IGGQVVDIISEGKKISQDELEYMHAKKTGALIRAAIVSGAILAEAPEDDLRLLREYGEKL 208 Query: 218 GIIFQLADDLLD 229 G++FQ+ DD+LD Sbjct: 209 GLVFQIKDDILD 220 >gi|262165140|ref|ZP_06032877.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] gi|262024856|gb|EEY43524.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] Length = 294 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 91/242 (37%), Positives = 131/242 (54%), Gaps = 28/242 (11%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+ G+ Sbjct: 55 QMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDA 114 Query: 123 LLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176 L T AF I++ SP + + R ++ +L G QGM GQ LD+ ++ + + Sbjct: 115 LQTLAFTILAEGTLSPAGETQ---RVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCE 231 + I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD Sbjct: 172 LETIHRNKTGALMRCAIRLGALAA----GEKGRAILPHLDRYAEAVGLAFQVQDDILDII 227 Query: 232 ED 233 D Sbjct: 228 SD 229 >gi|258624384|ref|ZP_05719332.1| geranyltranstransferase [Vibrio mimicus VM603] gi|258583346|gb|EEW08147.1| geranyltranstransferase [Vibrio mimicus VM603] Length = 294 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 91/242 (37%), Positives = 131/242 (54%), Gaps = 28/242 (11%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+ G+ Sbjct: 55 QMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDA 114 Query: 123 LLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176 L T AF I++ SP + + R ++ +L G QGM GQ LD+ ++ + + Sbjct: 115 LQTLAFTILAEGSLSPAGETQ---RVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCE 231 + I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD Sbjct: 172 LETIHRNKTGALMRCAIRLGALAA----GEKGRTILPHLDRYAEAVGLAFQVQDDILDII 227 Query: 232 ED 233 D Sbjct: 228 SD 229 >gi|300071276|gb|ADJ60676.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris NZ9000] Length = 285 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/195 (41%), Positives = 117/195 (60%), Gaps = 14/195 (7%) Query: 44 RYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 +Y+L+ GGK+IR L F++ TA +V AA+E IH SLIHDDLP+MDN R Sbjct: 30 KYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLPAMDNDDYR 89 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQ 157 RGK T H ++DE TAI+AG+ L F ++SS ++ +Q ++SLT + G Sbjct: 90 RGKLTNHKKFDEATAILAGDTLFFDPFYVLSS------SDLSAQTIVSLTRELAYASGSY 143 Query: 158 GMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+ GQ+LD+ E D TQ+ I ++KTG L+ F + I+A + E E+LR G+ Sbjct: 144 GMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAGIVAQKTNQEIEKLRVVGQ 203 Query: 216 NLGIIFQLADDLLDC 230 LG+ FQ+ DD+LD Sbjct: 204 ILGLAFQIRDDILDV 218 >gi|258621633|ref|ZP_05716665.1| geranyltranstransferase [Vibrio mimicus VM573] gi|258586105|gb|EEW10822.1| geranyltranstransferase [Vibrio mimicus VM573] Length = 294 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 91/242 (37%), Positives = 131/242 (54%), Gaps = 28/242 (11%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+ G+ Sbjct: 55 QMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDA 114 Query: 123 LLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176 L T AF I++ SP + + R ++ +L G QGM GQ LD+ ++ + + Sbjct: 115 LQTLAFTILAEGTLSPAGETQ---RVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCE 231 + I + KTGALM A GA+ S EK R L + E +G+ FQ+ DD+LD Sbjct: 172 LETIHRNKTGALMRCAIRLGAL----SAGEKGRAILPHLDRYAEAVGLAFQVQDDILDII 227 Query: 232 ED 233 D Sbjct: 228 SD 229 >gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM 16795] gi|164603021|gb|EDQ96486.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM 16795] Length = 295 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/225 (35%), Positives = 129/225 (57%), Gaps = 5/225 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 +E+ K ++DLL Q + + + A+ Y+L GGK++R L E A + Sbjct: 3 FKEDLKTKSAYIEDLLKQYMPK-EEGYQKTIFEAMNYSLSSGGKRLRPILTLESAKIIGG 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + AIE IH YSLIHDDLP+MDN RRGKPT H + + A +AG+ LL YA Sbjct: 62 DVKEVIPFCVAIEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGDGMATLAGDALLNYA 121 Query: 128 FEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMK 184 FEI+ ++ +IR + + + G+ GM+GGQ++DI+ E I++ ++ I K Sbjct: 122 FEIMLKESLGKENADIRLKAIYEIARGAGIYGMIGGQVVDIESENKSIEKEKLDFIHMNK 181 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T A++ +GAIM +A +++ + + + +N+G+ FQ+ DD+LD Sbjct: 182 TAAMIIGCMRAGAIMGNACEDDLQNITKYAKNIGLAFQIVDDILD 226 >gi|118595179|ref|ZP_01552526.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Methylophilales bacterium HTCC2181] gi|118440957|gb|EAV47584.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Methylophilales bacterium HTCC2181] Length = 296 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/212 (38%), Positives = 131/212 (61%), Gaps = 9/212 (4%) Query: 29 SHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHC 84 SH + + LL + YA+L GGK++RS L+ ++ + H L + A+E IH Sbjct: 22 SHFFKEIDQSLLKNVCEYAVLNGGKRLRSLLIYAISNYSDGYDTHFNCLAL--AVEMIHA 79 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSL+HDDLPSMD+ +RRGKP+ HI+YDE AI+ G+ L + AFE++SS K ++D ++ Sbjct: 80 YSLVHDDLPSMDDDELRRGKPSCHIKYDEAQAILGGDALQSLAFELLSSDKFNVQDKVKI 139 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACE-SGAIMAH 201 +++ L+ +IGL GM GQ +DI ++ ++ + +Q +KTGAL+ +C S I Sbjct: 140 KVLNMLSQSIGLHGMALGQSIDIDSANKELNLKSLDHLQALKTGALIEASCVMSYVISDK 199 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +Q ++ + G+ +G I+Q+ DD+LD E D Sbjct: 200 YNQKHEKDIASIGKLIGSIYQITDDILDFESD 231 >gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941] gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941] Length = 299 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 112/197 (56%), Gaps = 4/197 (2%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RL A+RY+LL GGK++R L E ASLF L AAIE IH +SLIHDDLP+M Sbjct: 35 ERLQEAMRYSLLAGGKRVRPLLCMESASLFGAPPERVLPSAAAIELIHTFSLIHDDLPAM 94 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN RRGKPT H ++ E AI+AG+ + +I+ + + + + ++ L H G Sbjct: 95 DNDDFRRGKPTSHKKFGEAMAILAGDAFFGESLALITDHQEGSAEQVLA-VVRELAHATG 153 Query: 156 LQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 L G+ GGQ LD++ ++ + KTGAL+ + GAI+A A + E + + Sbjct: 154 LAGLAGGQALDLEHTGRRAGPKELELTHHHKTGALIRASARIGAILAGAGEEGLEAISRY 213 Query: 214 GENLGIIFQLADDLLDC 230 LG+ FQ+ DD+LD Sbjct: 214 ATELGLCFQIVDDVLDA 230 >gi|332704078|ref|ZP_08424166.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay] gi|332554227|gb|EGJ51271.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay] Length = 298 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 84/198 (42%), Positives = 124/198 (62%), Gaps = 4/198 (2%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RLL+++ Y+LL GGK++R L + A L ++ A+ A++E IH YSLIHDDLP+M Sbjct: 32 ERLLTSMEYSLLAGGKRLRPVLCLKWAKLCGLDMEKAMPFAASLELIHTYSLIHDDLPAM 91 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRGKP+ H Q+DE TAI+AG+GLLT AF +++ L M ++ G Sbjct: 92 DNDDLRRGKPSNHKQFDEATAILAGDGLLTEAFSLMAQAAESLPAERVVCAMKAVAAAAG 151 Query: 156 LQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM+GGQ LD++ I Q+ + MKTGAL+ AC SGA++A + + E+ Sbjct: 152 AGGMVGGQALDMEYTGKAGISLDQLQTMHAMKTGALIRVACLSGAMLAGSKASVLEKAST 211 Query: 213 FGENLGIIFQLADDLLDC 230 +G +G+ FQ+ADD+LD Sbjct: 212 YGAAIGVAFQIADDILDV 229 >gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5] gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5] Length = 296 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 7/231 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L LQ I+ L++LL + + T ++ +L ++R GGK++R L A Sbjct: 4 LEQSLQHAIPLINQRLEELLSPSDEPLLTTIHEAMLYSVRA---GGKRLRPLLCLLTAGA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + L + AIE IH YSLIHDDLP++DN +RRGKPT H Y E AI+AG+ LL Sbjct: 61 LRQDESRVLDIACAIEMIHTYSLIHDDLPALDNDDLRRGKPTNHRVYGEAMAILAGDALL 120 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182 AFE++ + L ++ +++ + + G GM+GGQ++DIQ E ID + I + Sbjct: 121 NRAFEVLC--QLPLAPDLVIRVIAEIASSSGTAGMIGGQVVDIQSEGKSIDMPTMRYIHE 178 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTG ++ S AI A+ + E +G N+G+ FQ+ADD+LD E D Sbjct: 179 NKTGRIIRSCLVSSAIACQATAEQIELFDRYGYNIGLAFQIADDILDIEGD 229 >gi|294827621|ref|NP_710507.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans serovar Lai str. 56601] gi|293385465|gb|AAN47525.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans serovar Lai str. 56601] Length = 313 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 123/220 (55%), Gaps = 14/220 (6%) Query: 26 QTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 QT S + Q L A++Y+L+ GGK++R L L +GA++ECIH Sbjct: 24 QTLSILSKQSAPELFEAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGASLECIHT 83 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSLIHDDLPSMDN RRG PT+H ++ E TAI+AG+ L ++AF IS + + D+ Sbjct: 84 YSLIHDDLPSMDNDDFRRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVENGDHFLH 143 Query: 145 QLMLSLTH-NIGLQGMLGGQMLDIQ---------DEFIDETQVFMIQ---KMKTGALMCF 191 + +L + H G GM+ GQ+ D+Q D ++ M+Q ++KTGAL+ Sbjct: 144 RNLLEILHAGCGAPGMVSGQVYDLQMERENVKENDSTNQSDKIEMLQLTHRLKTGALIKS 203 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A G + + + L +GE+LG++FQ+ DD+LD E Sbjct: 204 ALLLGNRLRKDWKKRETSLSQYGEDLGLLFQITDDILDVE 243 >gi|330830903|ref|YP_004393855.1| Geranyltranstransferase [Aeromonas veronii B565] gi|328806039|gb|AEB51238.1| Geranyltranstransferase [Aeromonas veronii B565] Length = 296 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/203 (40%), Positives = 116/203 (57%), Gaps = 9/203 (4%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+ Y LL GGK++R FLV + V AA+ECIH YSL+HDDLP+MD Sbjct: 31 RLRDAMSYGLLLGGKRVRPFLVYAVGEMLGVKSELLDGPAAAVECIHAYSLLHDDLPAMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHN 153 N +RRG+PTVH +DE TAI+AG+ L T AF I++ P + + + +R ++ +L Sbjct: 91 NDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPMPDSLMANRVR--MLSTLARA 148 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKERL 210 G GM GGQ LD+Q E I ++ + + KTGAL+ A GA+ A L Sbjct: 149 SGYLGMCGGQALDLQAEGRQISLAELEQVHRHKTGALIECAVALGALCKADVDDATLAAL 208 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD D Sbjct: 209 QTYAAAIGLAFQVQDDILDITGD 231 >gi|262172097|ref|ZP_06039775.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] gi|261893173|gb|EEY39159.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] Length = 294 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 91/242 (37%), Positives = 131/242 (54%), Gaps = 28/242 (11%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+ G+ Sbjct: 55 QMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDA 114 Query: 123 LLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176 L T AF I++ SP + + R ++ +L G QGM GQ LD+ ++ + + Sbjct: 115 LQTLAFTILAEGTLSPAGETQ---RVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCE 231 + I + KTGALM A GA+ A EK R L + E +G+ FQ+ DD+LD Sbjct: 172 LETIHRNKTGALMRCAIRLGALAA----GEKGRAILLHLDRYAEAVGLAFQVQDDILDII 227 Query: 232 ED 233 D Sbjct: 228 SD 229 >gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399] gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399] Length = 295 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 15/211 (7%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 +D+L +++ Y+L+ GGK++R L+ A V+ + A+E IH YSLIHDDLP+ Sbjct: 31 DDKLRASMAYSLMAGGKRLRPILLMAAADAVGVDGTKFITAACALEMIHTYSLIHDDLPA 90 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGK T H YDE TAI+AG+ LLT AF +I + ++ ++ +L + Sbjct: 91 MDNDDYRRGKLTNHKVYDEGTAILAGDALLTLAFTVILRQQ-----DVPAERLLRVVDET 145 Query: 155 ----GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G +GM+GGQMLD++ E I ++ + KTGAL A GAI+A AS+ + Sbjct: 146 GRAAGAEGMVGGQMLDLEAENRRISMEELRRVHMGKTGALFRAALRCGAILAGASERQLA 205 Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLPK 236 L + ++ G+ FQ+ DD+LD ED+ K Sbjct: 206 ALTAYADHFGLAFQITDDILDVIGTAEDIGK 236 >gi|294054659|ref|YP_003548317.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221] gi|293613992|gb|ADE54147.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221] Length = 294 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/233 (35%), Positives = 127/233 (54%), Gaps = 10/233 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M +KL + +R++T +D LL + H RL A+RY++ GGK++R LV Sbjct: 1 MEASFKAKLSQYQQRVETGIDTLLPS-----EDTHPVRLHRAMRYSMEAGGKRLRPVLVL 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + L + + AIEC+H Y+LIHDDLPS+DN +RRG+P+ H Q+DE TA++A Sbjct: 56 ALSELADSGQ-DPIAAAVAIECLHTYTLIHDDLPSLDNSDLRRGRPSCHKQFDEPTAVLA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 G+ LLT+AFE++S + L+ L G + ++GGQ DI +E +D + Sbjct: 115 GDALLTFAFELLSREYAS-SPELAVGLIQDLADASGSRRLIGGQQEDIDNEGKPVDADTL 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I + KT AL+ A G + ++ G +LG+ FQ+ DD+LD Sbjct: 174 QYIHENKTAALLTAALSMGLRFTQPGAQALQLIQKVGFHLGMTFQIVDDILDA 226 >gi|300715575|ref|YP_003740378.1| Geranyltranstransferase [Erwinia billingiae Eb661] gi|299061411|emb|CAX58523.1| Geranyltranstransferase [Erwinia billingiae Eb661] Length = 299 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 118/208 (56%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N L++A+ Y ALLGGK++R FLV + + AA+ECIH YSLIHDDLP Sbjct: 28 QNSPLVNAMEYGALLGGKRLRPFLVYATGEMLGADDAALDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG+PT HI++ E TAI+AG+ L T AF I++ +P + R ++ L Sbjct: 88 AMDDDSLRRGQPTCHIKFGEDTAILAGDALQTLAFSILADTPMPGVSAEYRVAMLSELAQ 147 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E +D + I + KTGAL+ A GA+ A E+ R Sbjct: 148 ASGVAGMCGGQALDLAAEGQQVDLAALEQIHRHKTGALIRSAVRLGALAA----GERGRA 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 204 ALPALDRYANAIGLAFQVQDDILDVVGD 231 >gi|77464716|ref|YP_354220.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1] gi|77389134|gb|ABA80319.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1] Length = 289 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 127/202 (62%), Gaps = 8/202 (3%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 ++ A+RYA+ GGK++R FLV E A L + A+ A+IE +H YSL+HDD+P MD+ Sbjct: 30 VVHAMRYAVQGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDD 89 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG PTVH ++DE TA++AG+ L T AFE+++ P +R +L+ SL G +G Sbjct: 90 DLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAAVRIELVASLAKASGAEG 148 Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M+ GQ LDI E + Q+ +Q KTGAL+ ++ E+GAI+ Q ++ LR + Sbjct: 149 MVLGQALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAIL---GQADRVPLRRYA 205 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 LG+ FQ+ADD+LD E D K Sbjct: 206 TALGLAFQIADDILDVEGDAEK 227 >gi|116511680|ref|YP_808896.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris SK11] gi|116107334|gb|ABJ72474.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris SK11] Length = 301 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/195 (41%), Positives = 117/195 (60%), Gaps = 14/195 (7%) Query: 44 RYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 +Y+L+ GGK+IR L F++ TA +V AA+E IH SLIHDDLP+MDN R Sbjct: 46 KYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLPAMDNDDYR 105 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQ 157 RGK T H ++DE TAI+AG+ L F ++SS ++ +Q ++SLT + G Sbjct: 106 RGKLTNHKKFDEATAILAGDTLFFDPFYVLSS------SDLSAQTIVSLTRELAYASGSY 159 Query: 158 GMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+ GQ+LD+ E D TQ+ I ++KTG L+ F + I+A + E E+LR G+ Sbjct: 160 GMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAGIVAQKTNQEIEKLRVVGQ 219 Query: 216 NLGIIFQLADDLLDC 230 LG+ FQ+ DD+LD Sbjct: 220 ILGLAFQIRDDILDV 234 >gi|125624487|ref|YP_001032970.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363] gi|124493295|emb|CAL98263.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363] Length = 301 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/195 (41%), Positives = 117/195 (60%), Gaps = 14/195 (7%) Query: 44 RYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 +Y+L+ GGK+IR L F++ TA +V AA+E IH SLIHDDLP+MDN R Sbjct: 46 KYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLPAMDNDDYR 105 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQ 157 RGK T H ++DE TAI+AG+ L F ++SS ++ +Q ++SLT + G Sbjct: 106 RGKLTNHKKFDEATAILAGDTLFFDPFYVLSS------SDLSAQTIVSLTRELAYASGSY 159 Query: 158 GMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+ GQ+LD+ E D TQ+ I ++KTG L+ F + I+A + E E+LR G+ Sbjct: 160 GMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAGIVAQKTNQEIEKLRVVGQ 219 Query: 216 NLGIIFQLADDLLDC 230 LG+ FQ+ DD+LD Sbjct: 220 ILGLAFQIRDDILDV 234 >gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21] gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21] Length = 292 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/203 (38%), Positives = 117/203 (57%), Gaps = 12/203 (5%) Query: 38 RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 R+ A+ Y AL GGK++R L+ A L + +A+E IH YSLIHDDLP MD Sbjct: 30 RVDEAMAYSALAGGKRLRPILLMAAADAVGGKGTDFLPLASALEMIHTYSLIHDDLPEMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154 N RRG+ T H + + A++AG+GLLT AFE+++ K + LM+ + H I Sbjct: 90 NDDYRRGRLTNHKVFGQAMAVLAGDGLLTQAFEVMTEQK-----GVDPALMVEIIHLIAR 144 Query: 155 --GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G +GM+GGQ LDI +++ ++ ++ + + KTGAL A SGA++ S++E L Sbjct: 145 CAGPEGMVGGQALDINAEEKHLEPAEMKQLHEAKTGALFIAAIRSGALLGGGSKDEVNAL 204 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 F G+ FQ+ DD+LD E D Sbjct: 205 TKFATFFGLAFQITDDILDVEGD 227 >gi|154483652|ref|ZP_02026100.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC 27560] gi|149735562|gb|EDM51448.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC 27560] Length = 296 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 114/196 (58%), Gaps = 4/196 (2%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 ++ A+ Y+L GGK++R LV E LF + A AA+E IH YSL+HDDLP+MDN Sbjct: 33 IIEAMNYSLKAGGKRLRPMLVLETLRLFGGDEKEAYPFMAAMEMIHTYSLVHDDLPAMDN 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156 RRGK T H Y E I+AG+GLL A+E +S + K R+ L ++ L + G+ Sbjct: 93 DMYRRGKKTTHAVYGEDIGILAGDGLLNMAYETMSMAILKSKYPQRAALAMNILAYKAGI 152 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ +D+ +++ D + I K+KT AL+ A GAI+A + E + Sbjct: 153 YGMIGGQTVDVINENKEKDIDTINFIHKLKTAALIEGAMMVGAILAGVDEQAVETVEEIA 212 Query: 215 ENLGIIFQLADDLLDC 230 N+GI FQ+ DD+LD Sbjct: 213 TNVGIAFQIQDDILDV 228 >gi|269965070|ref|ZP_06179235.1| geranyltranstransferase [Vibrio alginolyticus 40B] gi|269830373|gb|EEZ84598.1| geranyltranstransferase [Vibrio alginolyticus 40B] Length = 294 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 132/241 (54%), Gaps = 20/241 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L S Q N+++++ LD L Q L+ A++Y LL GGK++R FLV Sbjct: 1 MQQTLTSFQQRNNQQLNLWLDQLPYQ---------EQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AAIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFID 173 G+ L T AF II+ SP + + R ++ +L H+ G GM GQ LD+ ++ + Sbjct: 112 GDALQTLAFTIIADGQLSPAAEAQ---RINMIKALAHSSGASGMCVGQALDLGAENRQVS 168 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232 ++ I + KTGAL+ A + GA+ A E L + + +G+ FQ+ DD+LD Sbjct: 169 LEEMEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIIS 228 Query: 233 D 233 D Sbjct: 229 D 229 >gi|187735758|ref|YP_001877870.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835] gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 297 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/228 (37%), Positives = 127/228 (55%), Gaps = 17/228 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + E ID LD LL +T H A+RY++ GGK++R L A Sbjct: 10 ITEQCALIDAALDRLLPAEDESPETIHK-----AMRYSIFAGGKRMRPVLCLAAAEACGG 64 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AL A+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LLT A Sbjct: 65 LAVDALVPACAVEMMHTYSLIHDDLPAMDNDDLRRGKPTSHKAFGEGVAILAGDALLTEA 124 Query: 128 FEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 F +I+ + + ++D +R L G ++GGQ+LD++ E + E +V + Sbjct: 125 FAVIAQVDDTERYTVRDYVR-----ELAATGGSTMLIGGQILDLEGEHKQLSEPEVRTVY 179 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + KT AL+ A G + A+A++++ E L FG NLG+ FQ+ DD+LD Sbjct: 180 EGKTAALLTTALRFGGMSANATESQLEALTDFGYNLGLAFQVIDDILD 227 >gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101] gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101] Length = 316 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 114/199 (57%), Gaps = 4/199 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + +++ A+RY+LL GGK++R L L N A+ A+E IH SLIHDDLP Sbjct: 49 YPEKIYEAMRYSLLAGGKRLRPILCLATCELSGGNIEMAMPTACALEMIHTMSLIHDDLP 108 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 SMDN RRG+ T H Y E AI+AG+GLL+YAFE + + + Q++ L Sbjct: 109 SMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVVTQTKNVLPKQVLQVIARLGKA 168 Query: 154 IGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G G++GGQ++D+ E I E + I KTGAL+ + GAI+A SQ RL Sbjct: 169 SGAAGLVGGQVVDLASEGISQVSEKTLHFIHTHKTGALLEASVVCGAILADVSQANLYRL 228 Query: 211 RCFGENLGIIFQLADDLLD 229 + +N+G+ FQ+ DD+LD Sbjct: 229 ERYAQNIGLAFQIVDDILD 247 >gi|325131595|gb|EGC54302.1| geranyltranstransferase [Neisseria meningitidis M6190] Length = 298 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 116/199 (58%), Gaps = 5/199 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN Sbjct: 36 LHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDN 95 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPT HI+Y E A++ G+ L T AF+++S P T+L + ++ L G + Sbjct: 96 DSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSR 154 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFG 214 GM GGQ +D+ + Q + Q +KTGAL+ A GA+ + S++ L + Sbjct: 155 GMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYA 214 Query: 215 ENLGIIFQLADDLLDCEED 233 LG+ FQ+ DD+LDCE D Sbjct: 215 AKLGLAFQVIDDVLDCEAD 233 >gi|262402761|ref|ZP_06079322.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] gi|262351543|gb|EEZ00676.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] Length = 294 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 91/241 (37%), Positives = 132/241 (54%), Gaps = 26/241 (10%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q NS+++D L+ + QT L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNSQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + +N L +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+ G Sbjct: 55 QMLGCELNELDT--PASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTG 112 Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177 + L T AF I++ + + R ++ +L G QGM GQ LD+ ++ + ++ Sbjct: 113 DALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEEL 172 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEE 232 I + KTGALM A GA+ A EK R L + + +G+ FQ+ DD+LD Sbjct: 173 ETIHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYADAVGLAFQVQDDILDIIS 228 Query: 233 D 233 D Sbjct: 229 D 229 >gi|296327940|ref|ZP_06870475.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154896|gb|EFG95678.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 297 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 7/212 (3%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + + + + + YA+L GGK++R FL+ L N N ++ A+E IH YSL+HD Sbjct: 25 ELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLNQNIEKGVKSAIALEMIHSYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP++DN RRGK T H + E I+ G+ LLTYAF ++S +L + + ++S Sbjct: 85 DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNIISK 144 Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 T G+ GM+GGQM+DIQ E ID + I KTG L+ E I+A+ ++++ Sbjct: 145 TSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANLEKDKR 204 Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 E L + + +G+ FQ+ DD+LD E EDL K Sbjct: 205 EVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236 >gi|45656187|ref|YP_000273.1| farnesyl-diphosphate synthase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599421|gb|AAS68910.1| geranyltranstransferase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 332 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 125/220 (56%), Gaps = 14/220 (6%) Query: 26 QTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 QT S + Q L A++Y+L+ GGK++R L L +GA++ECIH Sbjct: 43 QTLSILSKQSAPELFEAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGASLECIHT 102 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSLIHDDLPSMDN RRG PT+H ++ E TAI+AG+ L ++AF IS + + D+ Sbjct: 103 YSLIHDDLPSMDNDDFRRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVENGDHFLH 162 Query: 145 QLMLSLTH-NIGLQGMLGGQMLDIQ--DEFIDET-------QVFMIQ---KMKTGALMCF 191 + +L + H G GM+ GQ+ D+Q E + E ++ M+Q ++KTGAL+ Sbjct: 163 RNLLEILHAGCGAPGMVSGQVYDLQMERENVKENDLTNQSDKIEMLQLTHRLKTGALIKS 222 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A G + + + L +GE+LG++FQ+ DD+LD E Sbjct: 223 ALLLGNRLRKDWKKRETSLSQYGEDLGLLFQITDDILDVE 262 >gi|313683408|ref|YP_004061146.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994] gi|313156268|gb|ADR34946.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994] Length = 282 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 6/188 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R L+ +N + +A AIE +H YSLIHDDLP+MDN +RRG PT+ Sbjct: 33 GGKRFRPALLLGVVRAYNPLLIQSAYHAALAIELLHTYSLIHDDLPAMDNADLRRGIPTL 92 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDEV+AI+AG+ L TYAFE++S+ D + +L+ SL HN G +GM+ GQ +D Sbjct: 93 HKTYDEVSAILAGDALNTYAFEVLSN--APFADRVIVKLIRSLAHNGGAEGMVLGQAIDC 150 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ ++ QV M+ KTG L+ A + GA + + + L FG +LG++FQ+ D Sbjct: 151 HFENFRLELDQVKMLHIHKTGKLIAAALQMGAFIV-GRDDMAQELYDFGIDLGLLFQIQD 209 Query: 226 DLLDCEED 233 D+LD ++ Sbjct: 210 DILDVTQN 217 >gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f. nagariensis] gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f. nagariensis] Length = 312 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 82/225 (36%), Positives = 126/225 (56%), Gaps = 10/225 (4%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69 + +K ++ LD+ + Q ++ D L ++RY+LL GGK++R L L + Sbjct: 28 DRAKLVNKALDEAVPQ-------KYPDTLYESMRYSLLAGGKRVRPALCLAACELIGGDV 80 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 AL A+E IH SLIHDDLPSMDN RRG+PT H Y E AI++G+ LLTYAFE Sbjct: 81 QAALPAACAMEMIHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILSGDALLTYAFE 140 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGA 187 I+ + ++++ L G +G++ GQ++DIQ D+ + + I KT A Sbjct: 141 HIARATKGVSAERVLRVIMELGRATGAEGLVAGQVVDIQSEDKEVGLDVLKYIHLHKTAA 200 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ + GAI+ A + E+LR + N+G+ FQ+ DD+LD + Sbjct: 201 LLEASVVCGAIVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQ 245 >gi|168335575|ref|ZP_02693638.1| Polyprenyl synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 288 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 89/222 (40%), Positives = 128/222 (57%), Gaps = 11/222 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 N +ID +L + L + +T RL A+RY++L GGK+IR L+ Sbjct: 5 NKYKIDEMLXNYLAK-----ETGECTRLQEAMRYSVLQGGKRIRPILMRLAYEAVGGTGN 59 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A + AIE +H YSLIHDDLP+MDN +RRG PT H+++DE TAI+AG+GLLT AFEI Sbjct: 60 IAPYM-CAIEFVHTYSLIHDDLPAMDNDALRRGLPTNHVKFDEATAILAGDGLLTLAFEI 118 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGA 187 + D ++ L G GM+ GQM D+ E E + M++K+ KTGA Sbjct: 119 MLQDLVSDMDPAKAIAANILATGAGASGMVLGQMYDMFYEG-KEISIEMLEKIQLNKTGA 177 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ A + GA++ + S++E L +G LG +FQ+ DD+LD Sbjct: 178 LIKSALKMGAVLGYGSESELFALELYGIYLGKVFQIIDDILD 219 >gi|91225061|ref|ZP_01260283.1| geranyltranstransferase [Vibrio alginolyticus 12G01] gi|91190004|gb|EAS76275.1| geranyltranstransferase [Vibrio alginolyticus 12G01] Length = 294 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 132/241 (54%), Gaps = 20/241 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L S Q N+++++ LD L Q L+ A++Y LL GGK++R FLV Sbjct: 1 MQQTLTSFQQRNNQQLNLWLDQLPYQ---------EQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AAIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFID 173 G+ L T AF II+ SP + + R ++ +L H+ G GM GQ LD+ ++ + Sbjct: 112 GDALQTLAFTIIADGQLSPAAEAQ---RINMIKALAHSSGASGMCIGQALDLGAENRQVS 168 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232 ++ I + KTGAL+ A + GA+ A E L + + +G+ FQ+ DD+LD Sbjct: 169 LEEMEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIIS 228 Query: 233 D 233 D Sbjct: 229 D 229 >gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 302 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 8/212 (3%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q + L A+ Y+L+ GGK++R LV A + A+ V A+E +H YSLIHDDL Sbjct: 32 QVPETLSRAMDYSLMAGGKRLRPLLVVAAAEALGGSRDAAMPVACAVEMVHTYSLIHDDL 91 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSL 150 P++DN RRGKPT H + E AI+AG+GLLT+AF + +S K + ++ L Sbjct: 92 PALDNDDFRRGKPTNHKVFGEAMAILAGDGLLTHAFYSVVQASRKQGVPAEASLAIVEEL 151 Query: 151 THNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + G GM+GGQ+ D+Q E D Q+ I + KTG L+ F+ +G +A + + E Sbjct: 152 SRFAGPGGMVGGQVADMQGEQGVTDLDQLRYIHEHKTGDLIVFSVRAGGHIASGNAEQLE 211 Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 L +G LG FQ+ DD+LD E L KK Sbjct: 212 ALERYGRALGHAFQIQDDILDLIGDESKLGKK 243 >gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405] gi|125713574|gb|ABN52066.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405] Length = 295 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 7/206 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L SA+RY+L+ GGK++R L + + L A+E IH YSLIHDDLP+MDN Sbjct: 32 LYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGL 156 RRG+PT H Y E AI+AG+GLL AFEI+ + D R S+ + G+ Sbjct: 92 DDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGM 151 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+ GQ++D++ E +D + + ++KTGAL+ S AI+ A ++ ++L F Sbjct: 152 NGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAPVVSAAILCGADADDIQKLDEFA 211 Query: 215 ENLGIIFQLADDLLDCE---EDLPKK 237 ENLG+ FQ+ DD+LD E E L KK Sbjct: 212 ENLGLAFQIKDDILDVEGSSEKLGKK 237 >gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325] gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325] Length = 306 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 87/229 (37%), Positives = 128/229 (55%), Gaps = 14/229 (6%) Query: 9 LQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66 LQ+ +RI+ L L L TA L+ A+RY LLGGK+IR FLV + Sbjct: 19 LQQVQERINAFLAQQLNLNTAP-------SPLIEAMRYGVLLGGKRIRPFLVYATGRMLG 71 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + A +E IH YSLIHDDLP+MDN +RRG+PT HI +DE TAI+AG+ L + Sbjct: 72 ADLIQLDYAAAGLEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDEATAILAGDALQAF 131 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 AFEI++ L + L+ +L G +GM GQ LD+ + + I ++ I + K Sbjct: 132 AFEILTQAPA-LSAEQKLALVSTLAQASGAKGMCLGQSLDLISEQKQISLAELEQIHRNK 190 Query: 185 TGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCE 231 TGAL+ A + G I + + ++L+ + +G+ FQ+ DD+LD E Sbjct: 191 TGALLTAALQLGFICSPHFGDKTLAQQLQRYSRAIGLAFQVQDDILDIE 239 >gi|293652046|pdb|3M9U|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 gi|293652047|pdb|3M9U|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 gi|293652048|pdb|3M9U|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 gi|293652049|pdb|3M9U|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 gi|312208182|pdb|3PDE|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Isoprenyl Diphosphate And Magnesium gi|312208183|pdb|3PDE|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Isoprenyl Diphosphate And Magnesium gi|312208184|pdb|3PDE|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Isoprenyl Diphosphate And Magnesium gi|312208185|pdb|3PDE|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Isoprenyl Diphosphate And Magnesium Length = 309 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 7/198 (3%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPS 94 +L +A+ Y++L GGK++R L V + R A+E +H YSLIHDDLP+ Sbjct: 35 QLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPA 94 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN +RRG+PT H+++ A +AG+GLLT AF+ +++ T L +++ L+ +L Sbjct: 95 MDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTA--TDLPATMQAALVQALATAA 152 Query: 155 GLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+ GQ DIQ E ++ +Q+ ++ K KTGAL+ +A ++G I+ A + + Sbjct: 153 GPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQ 212 Query: 213 FGENLGIIFQLADDLLDC 230 F + G+ FQ+ DD+LD Sbjct: 213 FADAFGLAFQIYDDILDV 230 >gi|256027758|ref|ZP_05441592.1| dimethylallyltransferase [Fusobacterium sp. D11] gi|289765715|ref|ZP_06525093.1| dimethylallyltransferase [Fusobacterium sp. D11] gi|289717270|gb|EFD81282.1| dimethylallyltransferase [Fusobacterium sp. D11] Length = 297 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 7/212 (3%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + + + + + YA+L GGK++R FL+ L N N ++ A+E IH YSL+HD Sbjct: 25 ELSYPETIAKGMEYAILNGGKRLRPFLLFVILELLNENINKGVKSAIALEMIHSYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP++DN RRGK T H + E I+ G+ LLTYAF ++S +L + + ++S Sbjct: 85 DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNIISK 144 Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 T G+ GM+GGQM+DI+ E ID + I KTG L+ E I+A+ +++K Sbjct: 145 TSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEKDKK 204 Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 E L + + +G+ FQ+ DD+LD E EDL K Sbjct: 205 EVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236 >gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360] gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360] gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313] Length = 298 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 7/206 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L SA+RY+L+ GGK++R L + + L A+E IH YSLIHDDLP+MDN Sbjct: 35 LYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDN 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGL 156 RRG+PT H Y E AI+AG+GLL AFEI+ + D R S+ + G+ Sbjct: 95 DDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGM 154 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+ GQ++D++ E +D + + ++KTGAL+ S AI+ A ++ ++L F Sbjct: 155 NGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAPVVSAAILCGADADDIQKLDEFA 214 Query: 215 ENLGIIFQLADDLLDCE---EDLPKK 237 ENLG+ FQ+ DD+LD E E L KK Sbjct: 215 ENLGLAFQIKDDILDVEGSSEKLGKK 240 >gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20] gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20] Length = 298 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 7/206 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L SA+RY+L+ GGK++R L + + L A+E IH YSLIHDDLP+MDN Sbjct: 35 LYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDN 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGL 156 RRG+PT H Y E AI+AG+GLL AFEI+ + D R S+ + G+ Sbjct: 95 DDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGM 154 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+ GQ++D++ E +D + + ++KTGAL+ S AI+ A ++ ++L F Sbjct: 155 NGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAPVVSAAILCGADADDIQKLDEFA 214 Query: 215 ENLGIIFQLADDLLDCE---EDLPKK 237 ENLG+ FQ+ DD+LD E E L KK Sbjct: 215 ENLGLAFQIKDDILDVEGSSEKLGKK 240 >gi|330686046|gb|EGG97669.1| geranyltranstransferase [Staphylococcus epidermidis VCU121] Length = 288 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/208 (40%), Positives = 122/208 (58%), Gaps = 7/208 (3%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L ++ Y+L GGK+IR L+ + N ++ ++ A+E IH YSLIHDDLP+ Sbjct: 22 NTNLEESMLYSLNAGGKRIRPVLLLLTLDMLNEDYRQGMQSALALEMIHTYSLIHDDLPA 81 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGK T H Y E AI+AG+ LL AFE++S + L D + +++ L Sbjct: 82 MDNDDYRRGKLTNHKVYGEWKAILAGDALLPKAFELVSYD-SALSDTKKVKVIQRLAFAS 140 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+GGQ LD+Q D+ ID + + I + KTGAL+ FA S +A ++ L Sbjct: 141 GHLGMVGGQTLDMQSEDKAIDISTLESIHRTKTGALLTFAIMSAVDIADTDEHTSAMLNE 200 Query: 213 FGENLGIIFQLADDLLDC---EEDLPKK 237 F ++LG++FQ+ DDLLD E+ L KK Sbjct: 201 FSDHLGLMFQIKDDLLDIYGDEQKLGKK 228 >gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501] gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501] Length = 309 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/233 (36%), Positives = 126/233 (54%), Gaps = 11/233 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N L S L+E + ++ LD + +++ A+RY+LL GGK++R L Sbjct: 16 NFELASYLKEKKQLVEAALD-------QSLHITRPEKIYEAMRYSLLAGGKRLRPILCLT 68 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L +L A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG Sbjct: 69 TCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 128 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177 + LL+YAFE +++ + ++ L +G G++GGQ+LD++ E + V Sbjct: 129 DALLSYAFEYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTL 188 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I KTGAL+ + SGAI+A A + ERL + +N+G+ FQ+ DD+LD Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDV 241 >gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430] Length = 295 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 83/211 (39%), Positives = 124/211 (58%), Gaps = 15/211 (7%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 +D+L +++ Y+L+ GGK++R L+ A + + A+E IH YSLIHDDLP+ Sbjct: 31 DDKLRASMAYSLMAGGKRLRPILLMAAADAVGADGTKFITAACALEMIHTYSLIHDDLPA 90 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGK T H YDE TAI+AG+ LLT AF +I + ++ ++ +L + I Sbjct: 91 MDNDDYRRGKLTNHKAYDEGTAILAGDALLTLAFTVILRQQ-----DVPAERLLRIVDEI 145 Query: 155 ----GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G +GM+GGQMLD++ E I ++ + KTGAL A SGAI+A AS+ + Sbjct: 146 SRSAGAEGMVGGQMLDLEAENRRISMEELQRVHMGKTGALFRAALRSGAILAGASEQQLA 205 Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLPK 236 L + ++ G+ FQ+ DD+LD ED+ K Sbjct: 206 ALTTYADHFGLAFQITDDILDVVGTAEDIGK 236 >gi|330445276|ref|ZP_08308928.1| geranyltranstransferase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489467|dbj|GAA03425.1| geranyltranstransferase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 300 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 123/217 (56%), Gaps = 15/217 (6%) Query: 28 ASHMQTQ--HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 A+ + TQ + L+ A++Y LLGGK+ R FL + V AA+ECIH Sbjct: 23 ANWLATQPFADKALIKAMQYGTLLGGKRARPFLTYVTGEMLGVTQDDLDTPAAAVECIHA 82 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSLIHDDLP+MD+ +RRG+PT HI +DE TAI+AG+ L T AFEI+++ + N + Sbjct: 83 YSLIHDDLPAMDDDALRRGQPTCHIAFDEATAILAGDALQTLAFEILANGQLSQDGNTQR 142 Query: 145 QLMLS-LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAH 201 M+S L G GM GQ LD++ E + Q+ +I + KTGAL+ A GA+ A Sbjct: 143 IAMVSELAKASGAAGMCLGQTLDLEAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAA- 201 Query: 202 ASQNEK-----ERLRCFGENLGIIFQLADDLLDCEED 233 EK +L + E +G+ FQ+ DD+LD D Sbjct: 202 ---GEKGIAILPQLDKYAEAIGLAFQVQDDILDVISD 235 >gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544] gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544] Length = 298 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 114/204 (55%), Gaps = 14/204 (6%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL ++RY+L+ GGK++R L+ A L A+E IH YSLIHDDLP+MD Sbjct: 36 RLAESMRYSLMAGGKRLRPILLMAAADAVGAKGTDYLTTACALEMIHTYSLIHDDLPAMD 95 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-----SSPKTQLKDNIRSQLMLSLT 151 N RRGK T H + + A++AG+ LLT AFE+I + P T L+ + ++ Sbjct: 96 NDDYRRGKLTNHKVFGDGMAVLAGDALLTLAFEVIGRQQHTDPATLLR------TVQEIS 149 Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G+ GM+GGQ +D++ E I Q+ + KTGAL A SGAI+A AS+ + Sbjct: 150 TAAGMNGMVGGQAIDLESEGHRISMEQLRKMHMGKTGALFRAALRSGAILAGASEKQLAA 209 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E G+ FQ+ DD+LD D Sbjct: 210 LTAYAEGFGLAFQITDDILDVTGD 233 >gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 294 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 81/227 (35%), Positives = 126/227 (55%), Gaps = 7/227 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +L+E K I+D +L+ + RL A++Y+L +GGK++R L + Sbjct: 2 ELKEYLKERKAIIDREILKYLPSVPP-FGKRLYEAVKYSLTVGGKRLRPILCMAGCEVVG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N+ AL AIE IH YSLIHDDLP+MDN +RRG PT ++DE TAI+AG+ LL Sbjct: 61 GNYEEALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWYKFDEATAILAGDALLNR 120 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKM 183 AFE++S I+ ++ ++ G+ GM+ GQ D+ E + ++ I + Sbjct: 121 AFEVLSQWNFDCDRKIK--VIEEISKASGMLGMVLGQQCDMDAEGRKDVTLEELLFIHRH 178 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + SG I S+ E L+ +G+++G+ FQ+ DD+LD Sbjct: 179 KTGRLITASVVSGGITGGGSEEEIGTLKKYGDSIGLAFQIIDDVLDV 225 >gi|304312212|ref|YP_003811810.1| Polyprenyl synthetase [gamma proteobacterium HdN1] gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1] Length = 297 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 84/237 (35%), Positives = 128/237 (54%), Gaps = 9/237 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L + LQ R++T L+ + Q +L A+ YA++ GGK++R L Sbjct: 1 MTFDLHAYLQTAQFRVNTRLEYWFAK-----QNTTAAKLSEAMHYAVMNGGKRLRPVLAF 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A A+E +H YSL+HDDLP+MDN +RRG PT HI +DE TAI+A Sbjct: 56 AAAEACGTDASLANDAACALEMLHSYSLVHDDLPAMDNDALRRGVPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176 G+ L AFE+++S + + I+ +++ SL G GM GGQ LD+ + +D Sbjct: 116 GDALQCLAFEVLASSELPSMTTPIKLEMIRSLAVASGTHGMAGGQALDLAASGKLLDLHG 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + I ++KTG L+ A GA+ AHA ++ L + LG+ +Q+ DD+LD D Sbjct: 176 LETIHRLKTGCLIRAAVRLGALAAHAPESSLLALDQYASALGLAYQVQDDILDVTGD 232 >gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus elongatus BP-1] gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus elongatus BP-1] Length = 307 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 11/229 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L+E ++ L+ + + + +++ A+RY+L+ GGK++R L Sbjct: 17 LKAYLKERQALVEAALE-------ASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCE 69 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L A+ A+E IH SLIHDDLP+MDN RRGKPT H Y E AI+AG+GL Sbjct: 70 LMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGL 129 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 L YAFE + + +++ L H + G++GGQ++D++ E I + I Sbjct: 130 LAYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFI 189 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ + SGA++ A +++ RL + N+G+ FQ+ DD+LD Sbjct: 190 HSHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILD 238 >gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus elongatus] Length = 307 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 116/205 (56%), Gaps = 4/205 (1%) Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + + + +++ A+RY+L+ GGK++R L L A+ A+E IH SL Sbjct: 34 ASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCELMGGTVEMAMPTACALEMIHTMSL 93 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLP+MDN RRGKPT H Y E AI+AG+GLL YAFE + + +++ Sbjct: 94 IHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVEQTKNVPAEYLLKIV 153 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 L H + G++GGQ++D++ E I + I KTGAL+ + SGA++ A + Sbjct: 154 ARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIHSHKTGALLEASVVSGALLTGAHE 213 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 ++ RL + N+G+ FQ+ DD+LD Sbjct: 214 SDVARLSRYAANIGLAFQIVDDILD 238 >gi|255284124|ref|ZP_05348679.1| geranyltranstransferase [Bryantella formatexigens DSM 14469] gi|255265298|gb|EET58503.1| geranyltranstransferase [Bryantella formatexigens DSM 14469] Length = 295 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 112/196 (57%), Gaps = 4/196 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL A+ Y++ GGK++R L+ E LF N AAIE IH +SL+HDDLP+MDN Sbjct: 32 LLEAMNYSMTAGGKRLRPLLMQETYRLFGGNGKVVEPFMAAIEMIHTHSLVHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGL 156 RRGK T H+ Y E AI+AG+GLL YA+E N + M LT G+ Sbjct: 92 DEYRRGKKTTHVVYGEAMAILAGDGLLNYAYETACRAFALEPGNPHIGEAMTVLTTKTGV 151 Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GMLGGQ +D+Q + ++ I ++KT AL+ + +GAI+A AS+ E + Sbjct: 152 YGMLGGQAVDVQSVGGTLSREKLDFIYRLKTSALIECSMMTGAILAGASEEEIRTIGQVA 211 Query: 215 ENLGIIFQLADDLLDC 230 ++G+ FQ+ DD+LD Sbjct: 212 SDVGLAFQIQDDILDV 227 >gi|119474634|ref|ZP_01614987.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143] gi|119450837|gb|EAW32070.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143] Length = 309 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 92/245 (37%), Positives = 143/245 (58%), Gaps = 13/245 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN----DRLLSAIRYALL-GGKKIRS 55 MN + L + R+D +L + L +S + RL A+ Y+L+ GGK+IR Sbjct: 1 MNHDFSAFLMQTKTRVDQLLGEHLGSFSSSYAAVDSGIYLTRLQQAMHYSLINGGKRIRP 60 Query: 56 FLVTECASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110 LV A+ + + R+ +IE IH YSLIHDDLP+MD+ +RRG+PT H Sbjct: 61 VLVYATAAAITTDVSPVVTANLDRIACSIEMIHAYSLIHDDLPAMDDDDLRRGQPTCHRA 120 Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-- 168 +DE TAI+AG+ L AFE+++ T+ +I L+ LT G +GM+GGQ++D++ Sbjct: 121 FDEATAILAGDALQARAFELLTE-LTECPPHIHLNLLRILTQASGQRGMVGGQLIDLESV 179 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+ ID Q+ I ++KTGAL+ + GA + A + + E+L C+G+ +G+ FQ+ DD+L Sbjct: 180 DKPIDVQQLETIHRLKTGALIRASIAMGATLTGADRQQLEQLDCYGDAIGLAFQVHDDIL 239 Query: 229 DCEED 233 D E D Sbjct: 240 DIEAD 244 >gi|37527745|ref|NP_931090.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP synthase) [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787181|emb|CAE16258.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP synthase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 305 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 90/232 (38%), Positives = 135/232 (58%), Gaps = 14/232 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLF 65 ++ +E K ++++L+ T S + N+ L+ A+++ LLGGK++R FLV +F Sbjct: 7 TQFKEQLKICQQRVNNVLISTLSSVAFA-NNPLVHAMQHGTLLGGKRLRPFLVYAVGEMF 65 Query: 66 --NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + N+L A AA+ECIH +SLIHDDLP+MDN +RRG+PT HI++ E AI+AG+ L Sbjct: 66 GLSANNLDA--PAAAVECIHAFSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAGDAL 123 Query: 124 LTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178 AFEI+S P D R +++ L G+ GM GGQ LD+ E ID + Sbjct: 124 QALAFEILSKREMPDVTTAD--RLEMVAELATASGIAGMCGGQALDLAAEGRHIDLHMLE 181 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLD 229 I + KTGAL+ A GA A S ++ L + + +G+ FQ+ DD+LD Sbjct: 182 QIHRHKTGALIRCAVRMGAYGAGQSGHDALPELDQYAQAIGLAFQVQDDILD 233 >gi|294789125|ref|ZP_06754364.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453] gi|294482866|gb|EFG30554.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453] Length = 297 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 85/216 (39%), Positives = 123/216 (56%), Gaps = 5/216 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80 ++LL+ A Q + L A+RY LGG K++R LV A L + A+E Sbjct: 18 EILLERALPSINQAPETLHEAMRYVTLGGGKRLRPLLVWAAAELGDSVQAACEAAAVAVE 77 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 CIH YSL+HDD+P+MDN +RRGKPT H+QYDE TA++ G+ L T AF+++S+ T L Sbjct: 78 CIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEPTALLVGDALQTLAFDVLST-ATALSP 136 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAI 198 + +++ L G GM GGQ +D+ + +D +Q+ + Q KTGAL+ A GA+ Sbjct: 137 ARQIRMINVLAKASGSMGMAGGQAIDLANVGVDLSQIQLEQMHGWKTGALIRAAVALGAL 196 Query: 199 M-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 N L + LG+ FQ+ DD+LDCE D Sbjct: 197 SCPDLDDNALAALDNYATKLGLAFQVIDDVLDCEAD 232 >gi|260890388|ref|ZP_05901651.1| geranyltranstransferase [Leptotrichia hofstadii F0254] gi|260860008|gb|EEX74508.1| geranyltranstransferase [Leptotrichia hofstadii F0254] Length = 265 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 124/209 (59%), Gaps = 11/209 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL----RVGAAIECIHCYSLIHDDLP 93 + A+ YA++ GGK+IR L+ LF N+ + + AA+E IHCYSL+HDDLP Sbjct: 1 MAEAMEYAVMNGGKRIRPVLMYMICDLFEKNNYKSYDKIKEIAAALEFIHCYSLVHDDLP 60 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRGK TVH +Y+E ++ G+ LLT AF I+++ K+ L D + +L+ L+ Sbjct: 61 AMDNDDYRRGKLTVHKKYNEAIGVLVGDVLLTEAFGIVANSKS-LGDKNKIELISKLSEY 119 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQ +D++ E ++ + I KTG L+ A E I + ++E++ Sbjct: 120 AGFFGMVGGQFVDMESENKKVEIDTLKYIHAHKTGKLLTAAIELPMIALNIESEKREKMV 179 Query: 212 CFGENLGIIFQLADDLLDCE---EDLPKK 237 + + LGI FQ+ DD+LD E E++ KK Sbjct: 180 EYSKLLGIAFQIKDDILDIEGNFEEIGKK 208 >gi|19704662|ref|NP_604224.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714968|gb|AAL95523.1| Dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 297 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 7/212 (3%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + + + + + YA+L GGK++R FL+ L N N ++ A+E IH YSL+HD Sbjct: 25 ELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLNENINKGVKSAIALEMIHSYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP++DN RRGK T H + E I+ G+ LLTYAF ++S +L + + ++S Sbjct: 85 DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNIISK 144 Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 T G+ GM+GGQM+DIQ E ID + I KTG L+ E I+A+ ++++ Sbjct: 145 TSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANLEKDKR 204 Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 E L + + +G+ FQ+ DD+LD E EDL K Sbjct: 205 EVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236 >gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa] gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa] Length = 365 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 113/200 (56%), Gaps = 3/200 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 QH ++ A+RY+LL GGK++R L L + A+ A+E IH SLIHDDL Sbjct: 97 QHPQKINEAMRYSLLAGGKRVRPILCIASCELVGGDEGLAMPAACALEMIHTMSLIHDDL 156 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT H + E TA++AG+ LL+ AFE ++ + + Q + L Sbjct: 157 PCMDNDDLRRGKPTSHKIFGEDTAVLAGDALLSLAFEHVARNTKNVSSDRVVQAIAELGS 216 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +G +G++ GQ++DI E + + + I KT L+ A GAIM A ERL Sbjct: 217 TVGSKGLVAGQIVDIDSEGKEVSLSTLEYIHVHKTAKLLEAAVVCGAIMGGADATSVERL 276 Query: 211 RCFGENLGIIFQLADDLLDC 230 R + ++G++FQ+ DD+LD Sbjct: 277 RKYARSIGLLFQVVDDILDV 296 >gi|222151415|ref|YP_002560571.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402] gi|222120540|dbj|BAH17875.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402] Length = 290 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 5/209 (2%) Query: 26 QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 + S + + + RL ++ Y+L GGK+IR V N + L G A+E IH Sbjct: 17 EVISGLYSAKDGRLFDSMHYSLSAGGKRIRPLFVLTTIDSLGGNAVDGLSFGVALEMIHT 76 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSLIHDDLP+MDN RRGK T H +DE TAI+AG+ LLT +F +I+ K +I+ Sbjct: 77 YSLIHDDLPAMDNDDYRRGKLTNHKHFDEATAILAGDALLTDSFRMITEGK--FDADIKL 134 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA 202 L+ L+ G +GM+ GQMLD++ E ++ Q+ + KTG L+ A + I+ Sbjct: 135 PLISLLSEAAGSKGMVYGQMLDMEGEHQALELNQMEQVHSYKTGELIRAAFVAAGIIMKL 194 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCE 231 + + + L G N+G++FQ+ DD+LD E Sbjct: 195 TDEKIQLLDQIGRNVGLMFQIQDDILDVE 223 >gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9] gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9] Length = 294 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 86/218 (39%), Positives = 131/218 (60%), Gaps = 13/218 (5%) Query: 31 MQTQHNDRLL-SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 ++ + N +++ A++Y++ GGK++R L LF + AL V AIE IH YSLI Sbjct: 21 LEVEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDIKKALPVACAIELIHTYSLI 80 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MDN +RRGKPT H Y E AI+AG+GLL AFE++ + L++ Q +L Sbjct: 81 HDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFEVLI--RHALENPHDYQRIL 138 Query: 149 SLTHNI----GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202 T+ I G +GM+GGQ++DI Q+ + ++ + + KTGAL+ + +GA +A A Sbjct: 139 KATNEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHKTGALIEASVCAGAYIAGA 198 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 + + LR + +G+ FQ+ DD+LD EE L KK Sbjct: 199 IEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKK 236 >gi|254228604|ref|ZP_04922028.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] gi|262395026|ref|YP_003286880.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] gi|151938783|gb|EDN57617.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] gi|262338620|gb|ACY52415.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] Length = 294 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 88/238 (36%), Positives = 130/238 (54%), Gaps = 14/238 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L S Q N+++++ LD L Q L+ A++Y LL GGK++R FLV Sbjct: 1 MQQTLTSFQQRNNQQLNLWLDQLPYQ---------EQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AAIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176 G+ L T AF II+ + + R ++ +L H+ G GM GQ LD+ ++ + + Sbjct: 112 GDALQTLAFTIIADGQLNPAAETQRINMIKALAHSSGANGMCVGQALDLGAENRQVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 + I + KTGAL+ A + GA+ A E L + + +G+ FQ+ DD+LD D Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISD 229 >gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var. palaestina] Length = 364 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 79/226 (34%), Positives = 124/226 (54%), Gaps = 11/226 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L E K ++ LD+ +L + +++ A+RY+LL GGK++R L + L Sbjct: 77 LLEKGKSVNQALDNAIL-------IREPEKIHEAMRYSLLAGGKRVRPILCIAASELVGG 129 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N A+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+ LL +A Sbjct: 130 NESMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFA 189 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMK 184 FE +++ + + + + L +IG +G++ GQ++DI + + I K Sbjct: 190 FEYVANATVGVSPSRVVRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHK 249 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 T AL+ + GAI+ + + ERLR F +G++FQ+ DD+LD Sbjct: 250 TAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDV 295 >gi|332531501|ref|ZP_08407403.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624] gi|332039053|gb|EGI75477.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624] Length = 313 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 5/207 (2%) Query: 32 QTQHNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 + +H D +L A+RYA+L GGK++R LV ALR A E IH YSL+H Sbjct: 32 EPEHLDVVLGLAMRYAVLDGGKRLRPLLVLAACEAVRGEADAALRAACATELIHAYSLVH 91 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLML 148 DD+P MDN +RRGKPTVH+Q+ E A++AG+ L AFE+++ + + ++++L Sbjct: 92 DDMPCMDNDVLRRGKPTVHVQFGEAQALLAGDALQALAFELLTPDDEVAVPVGMQARLCR 151 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L G GM GGQ +D+ + DE ++ + ++KTGAL+ + GA H +Q + Sbjct: 152 LLARAAGSSGMAGGQAIDLASVGVKLDEERLRQMHRLKTGALLQASVMMGAACGHPTQAQ 211 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 + L +G +G+ FQ+ DD+LD D Sbjct: 212 QAALSDYGAAIGLAFQVVDDILDVTAD 238 >gi|311280690|ref|YP_003942921.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] gi|308749885|gb|ADO49637.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] Length = 299 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 13/211 (6%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q N L+ A+ Y ALLGGK++R FLV ++F V+ T AA+ECIH YSL+HD Sbjct: 25 QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGTMFGVSLTTLDAPAAAVECIHAYSLMHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149 DLP+MD+ +RRG+PT H+++ E AI+AG+ L T AF I+S +P ++ D R ++ Sbjct: 85 DLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILSDAPMPEVADRDRIAMISE 144 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G+ GM GGQ LD+Q E +D + I + KTGAL+ A GA+ S EK Sbjct: 145 LAQASGVAGMCGGQALDLQAEGQQVDLAALERIHRHKTGALIRAAVRLGAL----SAGEK 200 Query: 208 ER-----LRCFGENLGIIFQLADDLLDCEED 233 R L + E++G+ FQ+ DD+LD D Sbjct: 201 GRAALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|260431854|ref|ZP_05785825.1| geranyltranstransferase [Silicibacter lacuscaerulensis ITI-1157] gi|260415682|gb|EEX08941.1| geranyltranstransferase [Silicibacter lacuscaerulensis ITI-1157] Length = 288 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 120/199 (60%), Gaps = 8/199 (4%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+ YA GGK++R FLV E A L ++ A+ IE +H YSL+HDDLP MD+ +R Sbjct: 32 AMAYATQGGKRLRGFLVLESARLHGMDETCAIWPATGIEALHAYSLVHDDLPCMDDDDLR 91 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG+PTVH Q++E A++AG+ L AFE+ + P+ + IR+ L L+L G +GM+ Sbjct: 92 RGRPTVHKQWNEGIAVLAGDALQALAFELCARPEVGPAE-IRADLALTLAQAAGARGMVL 150 Query: 162 GQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ LDI E + + +Q KTGAL+ ++ +GA +A ER+R + L Sbjct: 151 GQALDIAAETAQQPLSLEDITRLQAGKTGALIEWSGCAGARLAG---ENPERMRLYSRAL 207 Query: 218 GIIFQLADDLLDCEEDLPK 236 G+ FQ+ADD+LD E D+ K Sbjct: 208 GLAFQIADDILDVEGDVQK 226 >gi|169350498|ref|ZP_02867436.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552] gi|169292818|gb|EDS74951.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552] Length = 282 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 81/203 (39%), Positives = 122/203 (60%), Gaps = 15/203 (7%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + ++ A++Y+LL GGK+IR L+ + +N+ L AIE IH YSLIHDDLP Sbjct: 20 QDSKVKDAMKYSLLAGGKRIRPLLMLRIIQSYGLNYHDYLDAACAIEMIHTYSLIHDDLP 79 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MDN +RRGKPT H Q+DE TAI+AG+GLL A +I LK N S+L ++L Sbjct: 80 GMDNDDLRRGKPTCHRQFDEATAILAGDGLLNEAANVI------LKANYNSELKIALLSI 133 Query: 154 I----GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 + G+ GM+ GQ LDI +++ + ++ +I KTG L+ + + GA++A+ N+ Sbjct: 134 LYQASGVNGMILGQALDIKFENKKANRKELDLIHHHKTGDLISASMQMGALVANV--NDL 191 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 E + G +G+ FQ+ DD+LD Sbjct: 192 ETFKEIGYKIGLAFQIQDDILDV 214 >gi|15234534|ref|NP_195399.1| GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1); farnesyltranstransferase [Arabidopsis thaliana] gi|13432144|sp|P34802|GGPP1_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 1, chloroplastic; Short=GGPP synthase 1; Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1; AltName: Full=Dimethylallyltranstransferase 1; AltName: Full=Farnesyl diphosphate synthase 1; AltName: Full=Farnesyltranstransferase 1; AltName: Full=Geranyltranstransferase 1; Flags: Precursor gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana] Length = 371 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 115/196 (58%), Gaps = 8/196 (4%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L TA+ A+E IH SLIHDDLP MDN + Sbjct: 106 AMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL 165 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQLMLSLTHNIGLQG 158 RRGKPT H + E A++AG+ LL++AFE + S+ + + +R + + L IG +G Sbjct: 166 RRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEG 225 Query: 159 MLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 ++ GQ++DI E +D V + I KT AL+ + GAI+ S +E ERLR F Sbjct: 226 LVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKF 285 Query: 214 GENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 286 ARCIGLLFQVVDDILD 301 >gi|253995978|ref|YP_003048042.1| polyprenyl synthetase [Methylotenera mobilis JLW8] gi|253982657|gb|ACT47515.1| Polyprenyl synthetase [Methylotenera mobilis JLW8] Length = 303 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 10/221 (4%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALR 74 I+ +LD+ L + Q H+ A+RY+LLGG K++R+ L A L N A Sbjct: 25 IEIVLDEALPSETTAPQVLHD-----AMRYSLLGGGKRVRALLCYAAAELCATNATIADA 79 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSL+HDD+P MDN +RRGKP+ H QYD+ TA++ G+ L + AF+++S+P Sbjct: 80 AACAVEMIHAYSLVHDDMPCMDNDDLRRGKPSCHKQYDDATALLVGDALQSLAFDVLSTP 139 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFA 192 N + ++ L G GM GGQ +D+ + + + ++ + K+KTGAL+ A Sbjct: 140 TLCESANQQISMLNILAKASGSLGMAGGQAIDLASVGKALSQHELENMHKLKTGALIQAA 199 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GA A Q + + E++G+ FQ+ DD+LD E D Sbjct: 200 ALLGASSGTAEQ--MSAVIVYAEHIGLAFQVVDDILDVEAD 238 >gi|237744132|ref|ZP_04574613.1| dimethylallyltransferase [Fusobacterium sp. 7_1] gi|229431361|gb|EEO41573.1| dimethylallyltransferase [Fusobacterium sp. 7_1] Length = 297 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 7/212 (3%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + + + + + + YA+L GGK++R FL+ L N + ++ A+E IH YSL+HD Sbjct: 25 ELSYPETIANGMEYAILNGGKRLRPFLLFVTLELLNEDIKKGVKSAIALEMIHSYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP++DN RRGK T H + E I+ G+ LLTYAF ++S +L + + ++S Sbjct: 85 DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNIISK 144 Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 T G+ GM+GGQM+DIQ E ID + I KTG L+ E I+A+ ++++ Sbjct: 145 TSEYAGINGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEKDKR 204 Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 E L + + +G+ FQ+ DD+LD E EDL K Sbjct: 205 EVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236 >gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp. lyrata] gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp. lyrata] Length = 379 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 115/196 (58%), Gaps = 8/196 (4%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L TA+ A+E IH SLIHDDLP MDN + Sbjct: 114 AMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL 173 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQLMLSLTHNIGLQG 158 RRGKPT H + E A++AG+ LL++AFE + S+ + + +R + + L IG +G Sbjct: 174 RRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAIGELAKAIGTEG 233 Query: 159 MLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 ++ GQ++DI E +D V + I KT AL+ + GAI+ S +E ERLR F Sbjct: 234 LVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKF 293 Query: 214 GENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 294 ARCIGLLFQVVDDILD 309 >gi|292898693|ref|YP_003538062.1| geranyltranstransferase [Erwinia amylovora ATCC 49946] gi|291198541|emb|CBJ45649.1| geranyltranstransferase [Erwinia amylovora ATCC 49946] gi|312171554|emb|CBX79812.1| geranyltranstransferase [Erwinia amylovora ATCC BAA-2158] Length = 299 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 115/200 (57%), Gaps = 5/200 (2%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++A+ Y ALLGGK++R FLV + + AAIECIH YSLIHDDLP+MDN Sbjct: 32 LVNAMEYGALLGGKRLRPFLVYATGDMLRADDAALDAPAAAIECIHAYSLIHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E +AI+AG+ L T AF I++ +P + R ++ L G+ Sbjct: 92 DSLRRGQPTCHIKFGEESAILAGDALQTLAFSILADAPMPGVMAESRIAMLSELAQASGV 151 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213 GM GGQ LD+ E T ++ I + KTGAL+ A GA+ A S L F Sbjct: 152 AGMCGGQALDLAAEGKKVTLNELEQIHRHKTGALIRSAVRLGALTAGESGRAALPALDRF 211 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 212 ANAIGLAFQVQDDILDVTGD 231 >gi|260893255|ref|YP_003239352.1| Polyprenyl synthetase [Ammonifex degensii KC4] gi|260865396|gb|ACX52502.1| Polyprenyl synthetase [Ammonifex degensii KC4] Length = 286 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 78/231 (33%), Positives = 127/231 (54%), Gaps = 11/231 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 L E ++ I+ LD L + H ++RY++LGG K++R L+ A Sbjct: 7 LAEKARLIEEALDRYLPPEFAPPHPIHQ-----SMRYSVLGGGKRLRPALLLGAAEAVGA 61 Query: 68 NHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + L + A IE IHCYSL+HDDLP+MDN RRG+PT H + E AI+ G+ LLT Sbjct: 62 DVAEDLLLAACGIELIHCYSLVHDDLPAMDNDDFRRGRPTSHRVFGEAIAILTGDALLTL 121 Query: 127 AFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQK 182 FE+++ + + ++++ + G +GM+GGQ+LD+ + + + I + Sbjct: 122 GFELLARAALVARQGSEVGLRVIVEVARAAGSEGMVGGQVLDLGGSKNADPALLLEEIHR 181 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL A +GA++ A + ++L + E LG+ FQ+ DD+LD +E+ Sbjct: 182 KKTGALFVAAVRAGALLGGAQEEALQKLTLYAEELGLAFQIVDDILDLDEE 232 >gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Syntrophus aciditrophicus SB] gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Syntrophus aciditrophicus SB] Length = 308 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 86/238 (36%), Positives = 131/238 (55%), Gaps = 16/238 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + ++E RID +D L + + L A+RY+L GGK+IR L A Sbjct: 13 LNAYIKEKKLRIDEAIDRYLPG-----EEESPGELFKAMRYSLFAGGKRIRPILCLAAAE 67 Query: 64 LF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +V+ L V A+E IH YSLIHDDLP+MDN RRGKPT H + + AI+AG+ Sbjct: 68 AVGTSVSSDCLLPVACALEYIHTYSLIHDDLPAMDNDDYRRGKPTSHKVFGDALAILAGD 127 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEFIDET-- 175 LLT AFE+++ +T + +++L + I G GM+GGQ+ D++ E Sbjct: 128 ALLTEAFELMT--RTDFHTGLAPEILLRVIREIAAAAGAFGMVGGQVEDLRAEGKPGNLD 185 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + I KTGA++ + +GAI++ S+ L +G +G++FQ+ADD+L+ E D Sbjct: 186 TLNRIHNRKTGAMIVVSLRAGAILSGGSEQAVSALTDYGHKIGLVFQIADDILNVEGD 243 >gi|149925097|ref|ZP_01913408.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1] gi|149814025|gb|EDM73658.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1] Length = 294 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 124/242 (51%), Gaps = 17/242 (7%) Query: 5 LPSKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 LPS L E ++ LD +L + A RL A+RYA+L GGK++R L Sbjct: 7 LPSYLDECRAAVNAALDAVLAMPEAGQPGADDPGRLREAMRYAVLQGGKRMRPVLTIAAC 66 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + AL A+E IH YSL+HDDLP+MDN RRGKPTVH+++ AI+ G+ Sbjct: 67 QAAGGDTAHALPAACALEMIHAYSLVHDDLPAMDNDLERRGKPTVHVEFGHANAILVGDA 126 Query: 123 LLTYAFEIISS-----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175 LLT AFE+++ P+ + D + L G+ GM+GGQ LD+ + D Sbjct: 127 LLTDAFEVLARGTEGVPRANIADAV-----TILARCAGINGMVGGQALDLIAGQDIADLE 181 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDCEEDL 234 + + +KTG L A G + + + E +L +G GI FQ ADD+LD +D Sbjct: 182 TLERVHALKTGGLYAAAGALGGLSSPTAAPEAATQLERYGLAFGIAFQHADDVLD--DDQ 239 Query: 235 PK 236 P Sbjct: 240 PS 241 >gi|8272410|dbj|BAA96457.1| farnesyl diphosphate synthase [Rhodobacter sphaeroides] Length = 256 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 85/198 (42%), Positives = 124/198 (62%), Gaps = 8/198 (4%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 +RYA+ GGK++R FLV E A L + A+ A+IE +H YSL+HDD+P MD+ +RR Sbjct: 1 MRYAVQGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRR 60 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G PTVH ++DE TA++AG+ L T AFE+++ P +R +L+ SL G +GM+ G Sbjct: 61 GLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAAVRIELVASLAKASGAEGMVLG 119 Query: 163 QMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 Q LDI E + Q+ +Q KTGAL+ ++ E+GAI+ Q ++ LR + LG Sbjct: 120 QALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAIL---GQADRVPLRRYATALG 176 Query: 219 IIFQLADDLLDCEEDLPK 236 + FQ+ADD+LD E D K Sbjct: 177 LAFQIADDILDVEGDAEK 194 >gi|257095634|ref|YP_003169275.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048158|gb|ACV37346.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 307 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 117/198 (59%), Gaps = 7/198 (3%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA L GGK++R LV L + +A+E IH YSL+HDDLP MD Sbjct: 44 RLHQAMRYASLDGGKRVRPLLVFAAGDLTDAARERLELAASAVELIHSYSLVHDDLPCMD 103 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIG 155 + +RRG+PT H++YDE TA++ G+ L + AFE+++ + D R M+ L G Sbjct: 104 DDVLRRGRPTCHVEYDEATALLVGDSLQSLAFELLA--REDFGDGARQLEMVRLLARASG 161 Query: 156 LQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRC 212 GM GGQ +D++ + +++ ++ ++ +KTGAL+ A GA+ S E+E L Sbjct: 162 SCGMAGGQSIDLESVGKTLNQPELELMHALKTGALIRAAVILGALCGTPLSTTEREALDR 221 Query: 213 FGENLGIIFQLADDLLDC 230 F + G++FQ+ DD+LDC Sbjct: 222 FAKRAGLLFQVVDDILDC 239 >gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506] gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506] Length = 308 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 8/207 (3%) Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 S + + +++ A+RY+LL GGK++R L L A+ A E H SL Sbjct: 35 SAVPVTYPEKIYEAMRYSLLAGGKRLRPILCLATCELLGGTVEMAMPTACAFEMSHTMSL 94 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLP+MDN RRGK T H Y E AI+AG+GLL YAFE I++ + Q++ Sbjct: 95 IHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEFIAAQTQNVPPQQVLQVV 154 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALM--CFACESGAIMAHA 202 L +G ++GGQ++D++ E + E + I KTGAL+ C C GAI+A A Sbjct: 155 ARLGRAVGAAELVGGQVVDLESEGVSDVSEETLNFIHTHKTGALLEACVVC--GAILAGA 212 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD 229 + +RL + +N+G+ FQ+ DD+LD Sbjct: 213 EPTDLQRLSRYAQNIGLAFQIVDDILD 239 >gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan] Length = 373 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 76/196 (38%), Positives = 113/196 (57%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 R+ ++RY+LL GGK+IR L L + TA+ A+E IH SL+HDDLP MD Sbjct: 108 RIHESMRYSLLAGGKRIRPMLCIAACELVGGDEETAMPAACAVEMIHTMSLMHDDLPCMD 167 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H Y E A++AG+ LL +AFE I++ +++ L +IG Sbjct: 168 NDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIATATKGASSEKIVRVVGELAKSIGA 227 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E I + I KT AL+ + GAI+ ++ E +LR F Sbjct: 228 EGLVAGQVVDICSEGISNVGLEHLEFIHLHKTAALLEGSVVLGAILGGGTEEEIAKLRKF 287 Query: 214 GENLGIIFQLADDLLD 229 N+G++FQ+ DD+LD Sbjct: 288 ARNIGLLFQVVDDILD 303 >gi|114707337|ref|ZP_01440234.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Fulvimarina pelagi HTCC2506] gi|114537218|gb|EAU40345.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Fulvimarina pelagi HTCC2506] Length = 296 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 91/199 (45%), Positives = 127/199 (63%), Gaps = 2/199 (1%) Query: 37 DRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RLL+A+R+ LGG K++R FL+ E A +F + L + A+E IHCYSL+HDDLP+M Sbjct: 33 ERLLAAMRHGTLGGGKRLRPFLLIESARIFGIQDDAVLDIACALEAIHCYSLVHDDLPAM 92 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNI 154 D+ +RRG+PTVH YD+ TAI+AG+ LLT AF +++ + K + +R +LS Sbjct: 93 DDDDLRRGRPTVHKAYDDATAILAGDSLLTLAFGLVAGASKIPPEARVRIAALLSADAGA 152 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G L + + E ++ +Q MKTGAL+ FACE GAI A AS ++ RLR FG Sbjct: 153 GGMAGGQALDLAAEQSALSEDEIARMQAMKTGALIAFACEGGAIAAAASSEDQRRLRRFG 212 Query: 215 ENLGIIFQLADDLLDCEED 233 E +G+ FQLADDLLD D Sbjct: 213 EIIGLAFQLADDLLDETAD 231 >gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1] gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1] Length = 297 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 71/195 (36%), Positives = 114/195 (58%), Gaps = 4/195 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 A+RY +L GGK++R LV A ++ + ALR ++E IH YSLIHDD+P MD+ Sbjct: 36 AMRYGVLDGGKRLRPLLVLSAAEAVGATDSEAALRAACSVELIHAYSLIHDDMPCMDDDV 95 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRGKPTVH+++ + A++AG+ + AFE+++ + ++++L L G GM Sbjct: 96 LRRGKPTVHVKFGQAQAMLAGDAMQALAFEVLTPEDDSVPLALQARLCGLLARAAGQDGM 155 Query: 160 LGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GGQ +D+ +DE + + + KTGAL+ + GA AS ++ L +G L Sbjct: 156 AGGQAIDLASIGRPLDEQSLSDMHRRKTGALLQASVMMGAACGDASPQARQALSEYGAAL 215 Query: 218 GIIFQLADDLLDCEE 232 G+ FQ+ DD+LD + Sbjct: 216 GLAFQVVDDILDVTQ 230 >gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3] gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3] Length = 296 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 86/224 (38%), Positives = 137/224 (61%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + L A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF+I+ Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI+++A++ ++E+L F +N+G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVE 229 >gi|325267227|ref|ZP_08133890.1| geranyltranstransferase [Kingella denitrificans ATCC 33394] gi|324981288|gb|EGC16937.1| geranyltranstransferase [Kingella denitrificans ATCC 33394] Length = 295 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 85/229 (37%), Positives = 128/229 (55%), Gaps = 6/229 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67 LQ KR+ + +L Q + +Q L A+RY AL GGK++R LV + L + Sbjct: 4 LQLWQKRVAAQTEIILQQKLPQI-SQEPVVLHEAMRYSALDGGKRLRPLLVWAASQLGDS 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AA+ECIH YSL+HDD+P MDN +RRGKPT H+Q+ + A++ G+ L T A Sbjct: 63 VQAACEAAMAAVECIHVYSLVHDDMPEMDNDQLRRGKPTCHVQFGDAVALLTGDALQTLA 122 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKT 185 F+I+S+ T+L + +++ L G GM GGQ +D+ + D Q + Q +KT Sbjct: 123 FDILSA-ATELPAERQLKMVQVLAKASGSLGMAGGQAIDLANVGKDMKQPALEQMHGLKT 181 Query: 186 GALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ A + G + + ++ RL + LG+ FQ+ DD+LDCE D Sbjct: 182 GALIRAAVQLGGLSCPQITADQLARLDAYAAKLGLAFQVIDDVLDCEAD 230 >gi|37679053|ref|NP_933662.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] gi|37197795|dbj|BAC93633.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] Length = 298 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 89/241 (36%), Positives = 130/241 (53%), Gaps = 28/241 (11%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L S Q N+++++ LD L N L+ A+RY L LGGK+ R FLV Sbjct: 9 LASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVYATGE 59 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + +AIECIH YSLIHDDLP+MD+ +RRG+PT H+++DE TAI+ G+ L Sbjct: 60 MLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILTGDAL 119 Query: 124 LTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177 T AF I++ SP + + R ++ +L G QGM GQ LD+ ++ + ++ Sbjct: 120 QTLAFTILAEGTLSPDGETQ---RVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEEL 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEK-----ERLRCFGENLGIIFQLADDLLDCEE 232 I + KTGAL+ A GA+ A EK +L F +G+ FQ+ DD+LD Sbjct: 177 EEIHRNKTGALIRCAVRLGALAA----GEKGLAILPQLEKFSTAIGLAFQVQDDILDIIS 232 Query: 233 D 233 D Sbjct: 233 D 233 >gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18] gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29] gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28] gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28] gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29] gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18] Length = 296 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 86/224 (38%), Positives = 137/224 (61%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + L A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF+I+ Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI+++A++ ++E+L F +N+G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVE 229 >gi|255262547|ref|ZP_05341889.1| geranyltranstransferase [Thalassiobium sp. R2A62] gi|255104882|gb|EET47556.1| geranyltranstransferase [Thalassiobium sp. R2A62] Length = 281 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 89/232 (38%), Positives = 132/232 (56%), Gaps = 24/232 (10%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 + + + + RI+ +D +L +D L+ + +AL GGK R+FLV E + L Sbjct: 6 TAMADAASRIEARIDQVLTP---------DDPLIEPMGHALRGGKMFRAFLVLEGSRLHG 56 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V+ AL AIECIH YSL+HDDLP MD+ +RRG+PTVH ++DE TA++ G+ L + Sbjct: 57 VDEAVALDAAMAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDEATAVLVGDNLQSL 116 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQK 182 AF++I+ P L I +L + + M+ GQMLDI E Q+ +Q+ Sbjct: 117 AFQLITGPG--LGGAIAQRLA------VDARTMVKGQMLDIAAETAATPLTLDQIIELQQ 168 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 KTGAL+ +A +G +MA A R + + LG+ FQ+ADDLLD E D+ Sbjct: 169 HKTGALIKWAAVAGPLMAGADIGPMSR---YADALGLAFQIADDLLDVEGDV 217 >gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 309 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 133/242 (54%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N L S L+E +++ LD S + + ++ A+RY+LL GGK++R L Sbjct: 16 NFSLASYLEEKRLIVESALD-------SSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLA 68 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + AL A+E IH SLIHDDLP+MDN RRGK T H + E AI+AG Sbjct: 69 TCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAG 128 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 +GLL YAFE +++ + +++ L +G G++GGQ+LD++ E I + Sbjct: 129 DGLLAYAFEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETL 188 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDL 234 I KTGAL+ + SGA++A A + +L + +N+G+ FQ+ DD+LD +E+L Sbjct: 189 GFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEEL 248 Query: 235 PK 236 K Sbjct: 249 GK 250 >gi|320540321|ref|ZP_08039973.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson] gi|320029641|gb|EFW11668.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson] Length = 306 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 83/201 (41%), Positives = 120/201 (59%), Gaps = 13/201 (6%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSM 95 L++++R+ ALLGGK++R FLV +F + N+L A AA+ECIH YSLIHDDLP+M Sbjct: 39 LVASMRHGALLGGKRLRPFLVYTTGQMFGIAQNNLDA--PAAAVECIHAYSLIHDDLPAM 96 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTH 152 DN +RRG+PT HI++ E AI+AG+ L + AF I++ P L+D R ++ L Sbjct: 97 DNDDLRRGQPTCHIKFGEANAILAGDALQSLAFSILADAEMPDVALRD--RLAMVSELAA 154 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209 G+ GM GGQ +D+ E I + I + KTGAL+ A GA+ A +S Sbjct: 155 ASGVAGMCGGQSMDLDAEGKQIGLAALEQIHRHKTGALIRAAIRLGALAAGSSGRAALPL 214 Query: 210 LRCFGENLGIIFQLADDLLDC 230 L + +G+ FQ+ DD+LD Sbjct: 215 LDRYAAAIGLAFQVQDDILDV 235 >gi|301170227|emb|CBW29831.1| geranyltranstransferase [Haemophilus influenzae 10810] Length = 296 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 95/237 (40%), Positives = 135/237 (56%), Gaps = 13/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L ++AFEI++ +P + + L+ L G+QGM GQ LD+ E I +++ Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174 Query: 179 MIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +I + KTGAL+ A + G I + Q ++ L + E +G+ FQ+ DD+LD E D Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDQRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|260494283|ref|ZP_05814414.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33] gi|260198429|gb|EEW95945.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33] Length = 297 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 124/212 (58%), Gaps = 7/212 (3%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + + + + + + YA+L GGK++R FL+ L N + ++ A+E IH YSL+HD Sbjct: 25 ELSYPETIANGMEYAILNGGKRLRPFLLFVTLELLNEDIKKGVKSAIALEMIHSYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP++DN RRGK T H + E I+ G+ LLTYAF ++S +L + + ++S Sbjct: 85 DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNIISK 144 Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 T G+ GM+GGQM+DI+ E ID + I KTG L+ + E I+A+ ++++ Sbjct: 145 TSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKTGKLIKLSIEIACIIANVEKDKR 204 Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 E L + + +G+ FQ+ DD+LD E EDL K Sbjct: 205 EVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236 >gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 294 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 86/218 (39%), Positives = 130/218 (59%), Gaps = 13/218 (5%) Query: 31 MQTQHNDRLL-SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 ++ + N +++ A++Y++ GGK++R L LF + AL V AIE IH YSLI Sbjct: 21 LEVEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDIKKALPVACAIELIHTYSLI 80 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MDN +RRGKPT H Y E AI+AG+GLL AFE++ + L++ Q +L Sbjct: 81 HDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFEVLI--RHALENPHDYQRIL 138 Query: 149 SLTHNI----GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202 T I G +GM+GGQ++DI Q+ + ++ + + KTGAL+ + +GA +A A Sbjct: 139 KATDEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHKTGALIEASVCAGAYIAGA 198 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 + + LR + +G+ FQ+ DD+LD EE L KK Sbjct: 199 IEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKK 236 >gi|254439465|ref|ZP_05052959.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] gi|198254911|gb|EDY79225.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] Length = 299 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 117/196 (59%), Gaps = 9/196 (4%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+ YA+ GGK +R FLV E A L V A + AIE +H YSLIHDDLP MD+ +R Sbjct: 44 AMMYAVRGGKALRGFLVLEGARLHGVEERIAAPIAGAIEAMHAYSLIHDDLPCMDDDDVR 103 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RGKPTVH ++D TA++ G+ L AFE+I S + + + ML++ + G +GM+G Sbjct: 104 RGKPTVHRKWDAATAVLTGDALQALAFELIMSADIKPEAKVVLAHMLAI--DAGERGMVG 161 Query: 162 GQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ DI E D ++ +Q KTGAL+ +AC +G +A A + +R +G+ L Sbjct: 162 GQAADIAAETADAPLTLREIESLQAKKTGALIEWACAAGPRIAGADEMP---MRHYGQAL 218 Query: 218 GIIFQLADDLLDCEED 233 G FQ+ADD+LD D Sbjct: 219 GRAFQIADDILDVTGD 234 >gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51] gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 289 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 130/229 (56%), Gaps = 12/229 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +L++ ++ +D+ L T + L ++ Y+L GGK+IR L A Sbjct: 5 ELEDYARLVDSYLAQFPWPTGT---------LAESMNYSLSAGGKRIRPVLALAAAHAVG 55 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + L A+E IH YSLIHDDLP+MDN RRG+ H + E AI+AG+ LLTY Sbjct: 56 GDCEDILPAVCALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGQAILAGDALLTY 115 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 AFE+I+ P + ++ + + + + G +GM+GGQMLD++ E ++ ++ + ++K Sbjct: 116 AFELIAQPMSGVEPQRQLRAIREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVHRLK 175 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TGA++ A GAI+A ++ + E L + + +G+ FQ+ DD+LD E D Sbjct: 176 TGAILVVAARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESD 224 >gi|332283715|ref|YP_004415626.1| geranyltranstransferase [Pusillimonas sp. T7-7] gi|330427668|gb|AEC19002.1| geranyltranstransferase [Pusillimonas sp. T7-7] Length = 304 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 84/239 (35%), Positives = 134/239 (56%), Gaps = 17/239 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC-- 61 P L + + I+ +LD +L Q +T + L A+RYA+LGG K++R+ LV Sbjct: 8 FPIWLDDRVQHIEAVLDQVLPQ-----ETVVPESLHEAMRYAVLGGGKRVRAALVYAAGE 62 Query: 62 ASLFNVNHLTALRVG-----AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 A+L + +A ++G AA+E IH YSLIHDDLP MD+ +RRG+PTVH+++ E TA Sbjct: 63 AALQSGTPASAQQIGLDHAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTVHVRFSEATA 122 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DE 174 ++AG+ L AFE++ + + Q L + G GM+GGQ +D + + + Sbjct: 123 MLAGDALQPLAFELLG--LMPIAPALIVQATQLLARSAGSLGMVGGQAIDCESVGVALSK 180 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 Q+ + MKTGA++ + G I+A A ++ L + +G+ FQ+ DD+LD D Sbjct: 181 EQLQQMHSMKTGAMLEASVLLGGIVAGAGSAVRQGLEDYATAIGLAFQVVDDILDVTAD 239 >gi|261212060|ref|ZP_05926346.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC341] gi|260838668|gb|EEX65319.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC341] Length = 294 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 132/241 (54%), Gaps = 26/241 (10%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S Q N++++D L+ + Q+ L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSYQQRNNQQLDLWLNRIPFQSLP---------LIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + +N L +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G Sbjct: 55 QMLGCELNELDT--PASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTG 112 Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177 + L T AF I++ + + R ++ +L G QGM GQ LD+ ++ + ++ Sbjct: 113 DALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEEL 172 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEE 232 I + KTGALM A GA+ A EK R L + + +G+ FQ+ DD+LD Sbjct: 173 ETIHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYADAVGLAFQVQDDILDIIS 228 Query: 233 D 233 D Sbjct: 229 D 229 >gi|186940997|dbj|BAG31127.1| geranyltranstransferase [Xanthomonas perforans 91-118] Length = 291 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 122/204 (59%), Gaps = 9/204 (4%) Query: 33 TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T RL +A+R+A+LGG K++R LV +LF A+E IH YSL+HDD Sbjct: 25 THAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDD 84 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ + +R M SL Sbjct: 85 LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLATASASAE--LRVSWMQSLA 142 Query: 152 HNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 G GM GGQ LDI Q + + + Q + +KTGAL+ A GA+ A+ ++ Sbjct: 143 TAAGAAGMCGGQALDIDATGQLQSLQDLQ--RMHALKTGALIRAAVRMGALTGCAAAADQ 200 Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231 +RL F + LG+ FQ+ DD+LD E Sbjct: 201 QRLDEFADALGLAFQVRDDILDVE 224 >gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus] Length = 356 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 80/195 (41%), Positives = 113/195 (57%), Gaps = 10/195 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L TA+ A+E IH SLIHDDLP MDN Sbjct: 94 AMRYSLLAGGKRVRPILCIAACELVGGEEATAMPAACAVEMIHTMSLIHDDLPCMDNDDF 153 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML-SLTHNIGLQGM 159 RRGKPT H Y E A++AG+ LL +AFE +SS +T+ R + L +IG +G+ Sbjct: 154 RRGKPTNHKVYGEDVAVLAGDSLLAFAFEYVSS-RTEGASPARVLAAIGELAKSIGTEGL 212 Query: 160 LGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ++DI QD +D+ + I KT AL+ + GAI+ S + E+LR F Sbjct: 213 VAGQVVDIASTGGQDIGLDQLEFIHIH--KTAALLEASVVLGAILGGGSDAQVEKLRTFA 270 Query: 215 ENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 271 RCIGLLFQVVDDILD 285 >gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase [Deferribacter desulfuricans SSM1] gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase [Deferribacter desulfuricans SSM1] Length = 300 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/235 (36%), Positives = 137/235 (58%), Gaps = 14/235 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N L + ++ ++R+D + + L + + L+ ++RY++ GGK++R L+ Sbjct: 4 NFNLKNYIKFFAQRVDDWIRNYLT-----YENEQTIGLIESMRYSIFAGGKRLRPVLIYS 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F AA+E +H YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG Sbjct: 59 SYGIFESYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKMFGEATAILAG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDI--QDEFIDE 174 + LLT AFEI+ + +I ++ +L L + G +GM+GGQ DI +++ ID+ Sbjct: 119 DALLTLAFEIMLD--KDINKDIPTETILEAAFKLAKSAGYKGMVGGQYADIINENKEIDK 176 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + I K KT AL+ + CE GAI+ A + +K+ L FGE +G+ FQ+ DD+LD Sbjct: 177 NTLDFIHKHKTAALISYCCELGAILGFADEKDKQNLAEFGEKIGLAFQIVDDILD 231 >gi|261492167|ref|ZP_05988738.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495736|ref|ZP_05992178.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308591|gb|EEY09852.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312240|gb|EEY13372.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 297 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 121/203 (59%), Gaps = 6/203 (2%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+ YA LLGGK++R FL+ + V AA+E IH YSL+HDDLP+MD+ Sbjct: 34 LVEAMAYAVLLGGKRVRPFLIYATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDD 93 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPT HI +DE TAI+AG+ L ++AFE++++ L D + + L G + Sbjct: 94 DRLRRGKPTCHIAFDEATAILAGDALQSFAFELLAT-DPHLTDREKVAQVTELATASGAK 152 Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KERLRCF 213 GM GQ LD+ +++ + ++ +I + KTGAL+ + G ++ SQN K+ L + Sbjct: 153 GMCLGQSLDLIAENKAVSLEELELIHRNKTGALILSSVMMGLNLSEHSQNLAIKQPLVNY 212 Query: 214 GENLGIIFQLADDLLDCEEDLPK 236 + +G+ FQ+ DD+LD D K Sbjct: 213 AKAIGLAFQVQDDILDVIGDTDK 235 >gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides] Length = 288 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 117/196 (59%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ ++RY++L GGK++R L L TA+ A+E IH SL+HDDLP MD Sbjct: 23 KIHESMRYSILAGGKRVRPLLCIAACELVGGQESTAMPAACAVEMIHTMSLMHDDLPCMD 82 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H+ + E A++AG+ LL +AFE+I++ T + + +++ L +IG Sbjct: 83 NDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTGVPADRIVRVIGELAKSIGS 142 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E + + + I KT AL+ + GAI+ A+ E E+LR F Sbjct: 143 EGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEGSVVLGAILGGATDPEVEKLRKF 202 Query: 214 GENLGIIFQLADDLLD 229 +G +FQ+ DD+LD Sbjct: 203 ARCIGFLFQVVDDILD 218 >gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113] gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113] Length = 296 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 4/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+LGG K++R L V +A+E IH YSL+HDDLPSMD Sbjct: 32 RLHEAMRYAVLGGGKRLRPLLTYSAGMAVGVAEAALDAPASAVELIHAYSLVHDDLPSMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PT H + E TA++AG+ L AF I++ P + + + ++ L G Sbjct: 92 NDDLRRGQPTCHKAFGETTALLAGDALQALAFRILAEPASTIPAENQINMLKLLAEAAGS 151 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213 +GM GGQ +D+ I T ++ + ++KTGAL+ + GA A +Q+ E+L F Sbjct: 152 RGMAGGQAIDLDSVGIQLTLSEMETMHRLKTGALIRASVLLGAWCQPAITQDTIEKLDHF 211 Query: 214 GENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD E D Sbjct: 212 AQCIGLAFQIQDDVLDVESD 231 >gi|16273345|ref|NP_439590.1| geranyltranstransferase [Haemophilus influenzae Rd KW20] gi|1170589|sp|P45204|ISPA_HAEIN RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|1574277|gb|AAC23087.1| geranyltranstransferase (ispA) [Haemophilus influenzae Rd KW20] Length = 295 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L ++AFEI++ +P + + L+ L G+QGM GQ LD+ E I +++ Sbjct: 117 ALQSFAFEILTKTPNISTEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 +I + KTGAL+ A + G I + H + E+ L + E +G+ FQ+ DD+LD E D Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|260580726|ref|ZP_05848552.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae RdAW] gi|260092543|gb|EEW76480.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae RdAW] Length = 296 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L ++AFEI++ +P + + L+ L G+QGM GQ LD+ E I +++ Sbjct: 117 ALQSFAFEILTKTPNISTEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 +I + KTGAL+ A + G I + H + E+ L + E +G+ FQ+ DD+LD E D Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|197334446|ref|YP_002155475.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio fischeri MJ11] gi|197315936|gb|ACH65383.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio fischeri MJ11] Length = 298 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 120/202 (59%), Gaps = 9/202 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A++Y+LL GGK+ R +LV A + + A AAIEC+H YSLIHDDLP+MDN Sbjct: 34 LTEAMKYSLLLGGKRARPYLVYITAQMLGIKAEFADSAAAAIECVHSYSLIHDDLPAMDN 93 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI---RSQLMLSLTHNI 154 +RRG T HI+YDE TAI+AG+ L T AFEI+++ QL D+ R ++ L+ Sbjct: 94 DDLRRGHATCHIKYDEATAILAGDALQTLAFEILAN--GQLSDDAETSRIDMIRVLSKAS 151 Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLR 211 G GM GQ LD+Q E +D T + I KTGAL+ A + GA+ A + +L Sbjct: 152 GASGMCMGQSLDLQAEGKKVDLTSLERIHANKTGALIKCAVQLGALCAGDKGKAILPQLE 211 Query: 212 CFGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD D Sbjct: 212 VYADAIGLAFQVQDDILDIISD 233 >gi|240113852|ref|ZP_04728342.1| geranyltranstransferase [Neisseria gonorrhoeae MS11] gi|240126561|ref|ZP_04739447.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679] gi|254494609|ref|ZP_05107780.1| geranyltranstransferase [Neisseria gonorrhoeae 1291] gi|268599920|ref|ZP_06134087.1| geranyltranstransferase [Neisseria gonorrhoeae MS11] gi|268685141|ref|ZP_06152003.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679] gi|226513649|gb|EEH62994.1| geranyltranstransferase [Neisseria gonorrhoeae 1291] gi|268584051|gb|EEZ48727.1| geranyltranstransferase [Neisseria gonorrhoeae MS11] gi|268625425|gb|EEZ57825.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679] Length = 298 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT HI+Y E TA++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHIKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKTGGSAGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + + + + +KTGAL+ A GA S E L + L Sbjct: 158 GGQAIDLANVGKQMVQADLERMHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|253682719|ref|ZP_04863516.1| geranyltranstransferase [Clostridium botulinum D str. 1873] gi|253562431|gb|EES91883.1| geranyltranstransferase [Clostridium botulinum D str. 1873] Length = 287 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 120/202 (59%), Gaps = 4/202 (1%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + +N L +++Y++ +GGK+IR L+ S++ N+ + + AIE IH YSLIHD Sbjct: 19 KGSYNKILYDSMKYSIEVGGKRIRPILMLSTYSIYKNNYKDIMPMACAIEMIHTYSLIHD 78 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP MDN +RRGKPT H + E AI+AG+GLL A I+ + + D + + Sbjct: 79 DLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNIMFNY-SLTHDKLALMASKVI 137 Query: 151 THNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + G +GM+GGQ++DI + + I ++ + K KTG L+ + +GAI+ AS+ E E Sbjct: 138 SEASGAEGMIGGQVVDIISEGQEISPDKLKYMHKNKTGQLIKSSIIAGAILGGASKEEIE 197 Query: 209 RLRCFGENLGIIFQLADDLLDC 230 L FG LG+ FQ+ DD+LD Sbjct: 198 ILDEFGSKLGLAFQIKDDILDV 219 >gi|206576602|ref|YP_002240111.1| geranyltranstransferase [Klebsiella pneumoniae 342] gi|288936860|ref|YP_003440919.1| polyprenyl synthetase [Klebsiella variicola At-22] gi|290510084|ref|ZP_06549454.1| geranyltranstransferase [Klebsiella sp. 1_1_55] gi|206565660|gb|ACI07436.1| geranyltranstransferase [Klebsiella pneumoniae 342] gi|288891569|gb|ADC59887.1| Polyprenyl synthetase [Klebsiella variicola At-22] gi|289776800|gb|EFD84798.1| geranyltranstransferase [Klebsiella sp. 1_1_55] Length = 299 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 124/211 (58%), Gaps = 13/211 (6%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q N L+ A+ Y ALLGGK++R FLV ++F V+ T AA+ECIH YSL+HD Sbjct: 25 QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGAMFGVSRTTLDAPAAAVECIHAYSLMHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149 DLP+MD+ +RRG PT HI++ E AI+AG+ L T AF I+S +P + D R ++ Sbjct: 85 DLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFSILSDAPMADVSDRDRLAMVSE 144 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G+ GM GGQ LD++ E +D + I + KTGAL+ A GA+ S E+ Sbjct: 145 LAQASGVAGMCGGQALDLEAEGQQVDLQALERIHRHKTGALIRAAVRMGAL----SAGER 200 Query: 208 ER-----LRCFGENLGIIFQLADDLLDCEED 233 R L + EN+G+ FQ+ DD+LD D Sbjct: 201 GRAALPALDRYAENIGLAFQVQDDILDVVGD 231 >gi|254302823|ref|ZP_04970181.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323015|gb|EDK88265.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 297 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 119/211 (56%), Gaps = 9/211 (4%) Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 LQ S+ +T + + YA+L GGK++R FL+ L N N ++ A+E IH Sbjct: 23 LQELSYPET-----IAKGMEYAILNGGKRLRPFLLFATLELLNQNIEKGVKSAIALEMIH 77 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSL+HDDLP++DN RRGK T H + E I+ G+ LLTYAF I+S + + + Sbjct: 78 SYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYILSQKNLKFLSSEQ 137 Query: 144 SQLMLSLTHNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA 200 ++S T G+ GM+GGQM+DI+ E ID + I KTG L+ E I+A Sbjct: 138 IVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKTGKLIKLPIEIACIIA 197 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + +++KE L + +G+ FQ+ DD+LD E Sbjct: 198 NVEKDKKEVLEEYANLIGLAFQVKDDILDVE 228 >gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307] gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307] Length = 300 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 S + + + L A+RY+LL GGK++R L L + AL A+E IH SL Sbjct: 28 SSLGPERPESLREAMRYSLLAGGKRLRPILCLASCELAGGDASLALPTATALEMIHTMSL 87 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQ 145 IHDDLP+MDN +RRG+PT H Y + TAI+AG+ LLT AFE+++ SP + ++ Sbjct: 88 IHDDLPAMDNDDLRRGRPTNHKVYGDATAILAGDALLTRAFEMVALRSPDVPAERLLKVI 147 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 LSL G G++GGQ++D+ E +D + I KTGAL+ + SGA++A A Sbjct: 148 GELSLA--AGAPGLVGGQIVDLASEGVEVDLDTLEYIHLHKTGALLQASVLSGALIAGAD 205 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230 E LR + +G+ FQ+ DD+LD Sbjct: 206 DTLLEALRTYSRAIGLAFQIIDDILDV 232 >gi|257467862|ref|ZP_05631958.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185] gi|317062151|ref|ZP_07926636.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185] gi|313687827|gb|EFS24662.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185] Length = 295 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 9/229 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L N K I++ +D L + + + + ++YA+L GGK++R L+ + Sbjct: 7 LDSNKKLIESSMDTYL------SELNYPEVIAEGMKYAVLNGGKRLRPILLFMILDILGC 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AAIE IH YSL+HDDLP++DN RRGK T H ++ E I+ G+ LLT+A Sbjct: 61 EKENGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHA 120 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F I++ L +++ + G+ GM+GGQM+DI E ID + I KT Sbjct: 121 FYILTDKNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDLETLKYIHSNKT 180 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 G LM E I+ A + EKE L F + +G+ FQ+ DD+LD E D Sbjct: 181 GKLMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDF 229 >gi|68250030|ref|YP_249142.1| geranyltranstransferase [Haemophilus influenzae 86-028NP] gi|145632792|ref|ZP_01788525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 3655] gi|145634984|ref|ZP_01790691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittAA] gi|68058229|gb|AAX88482.1| geranyltranstransferase [Haemophilus influenzae 86-028NP] gi|144986448|gb|EDJ93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 3655] gi|145267850|gb|EDK07847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittAA] Length = 296 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NALLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L ++AFEI++ +P + + L+ L G+QGM GQ LD+ E I +++ Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 +I + KTGAL+ A + G I + H + E+ L + E +G+ FQ+ DD+LD E D Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|260583060|ref|ZP_05850842.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae NT127] gi|260093911|gb|EEW77817.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae NT127] Length = 296 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GNFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L ++AFEI++ +P + + L+ L G+QGM GQ LD+ E I +++ Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 +I + KTGAL+ A + G I + H + E+ L + E +G+ FQ+ DD+LD E D Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|261341013|ref|ZP_05968871.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316] gi|288316878|gb|EFC55816.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316] Length = 299 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/208 (42%), Positives = 126/208 (60%), Gaps = 7/208 (3%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q N L+ A+ Y ALLGGK++R FLV ++F ++ T AA+ECIH YSLIHD Sbjct: 25 QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGNMFGISDATLDAPAAAVECIHAYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149 DLP+MD+ +RRG+PT HI++ E AI+AG+ L T AF I+S +P ++ D R ++ Sbjct: 85 DLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMVEVSDRYRLAMVSE 144 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G+ GM GGQ LD++ E ++ Q+ I + KTGAL+ A GA+ A Q K Sbjct: 145 LAMASGVAGMCGGQALDLEAEGRQVNLEQLERIHRHKTGALIRAAVRLGALSA-GEQGRK 203 Query: 208 ER--LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPILDRYAESIGLAFQVQDDILDVVGD 231 >gi|254458755|ref|ZP_05072179.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales bacterium GD 1] gi|207084521|gb|EDZ61809.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales bacterium GD 1] Length = 282 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 114/187 (60%), Gaps = 6/187 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R L+ + +N L R A A+E +H YSLIHDDLP+MD+ +RRG+PT+ Sbjct: 33 GGKRFRPALLLGVVAAYNSLMLDGARHAAYAVELLHTYSLIHDDLPAMDDSPLRRGEPTL 92 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H+ YDEVTAI+ G+ L TY+FE++S+ D R +L+ L N GL GM+ GQ +D Sbjct: 93 HVLYDEVTAILVGDALNTYSFEVLSN--APFSDYTRVKLIQELAKNGGLNGMVLGQAIDC 150 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +++ ++ + ++ KT L+ + + GAI+ + ++L FG LG++FQ+ D Sbjct: 151 YFENKPLNVADIKILHTNKTAKLIAASLKMGAIIV-GQEELGDKLYAFGIKLGLLFQIQD 209 Query: 226 DLLDCEE 232 D+LD + Sbjct: 210 DILDVTQ 216 >gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa] Length = 370 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 81/228 (35%), Positives = 123/228 (53%), Gaps = 11/228 (4%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S + E + R++ LDD + + ++ A+RY+LL GGK++R L L Sbjct: 81 SYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELV 133 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ LL Sbjct: 134 GGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLA 193 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQK 182 +AFE I+ + + + L +IG +G++ GQ++DI E + + Q+ I Sbjct: 194 FAFEHIAVSTAGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLEQLEFIHL 253 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KT AL+ A GAI+ S + E+LR F +G++FQ+ DD+LD Sbjct: 254 HKTAALLEGAVVLGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILDV 301 >gi|145630745|ref|ZP_01786523.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae R3021] gi|144983627|gb|EDJ91087.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae R3021] Length = 296 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L ++AFEI++ +P + + L+ L G+QGM GQ LD+ E I +++ Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 +I + KTGAL+ A + G I + H + E+ L + E +G+ FQ+ DD+LD E D Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies] Length = 386 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 5/207 (2%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 + ++ ++ ++RY+LL GGK++R L L A+ AIE IH SLIH Sbjct: 113 IPPRYPQKIYESMRYSLLAGGKRVRPILCIAACELMGGTEELAMPTACAIEMIHTMSLIH 172 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLML 148 DDLP +DN +RRGKPT H + E TAIIAG+ LL+ AFE ++ S L +I +L+ Sbjct: 173 DDLPYIDNDDLRRGKPTNHKVFGEDTAIIAGDALLSLAFEHVAVSTSRTLGTDIILRLLS 232 Query: 149 SLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 + G +G++GGQ++DI+ D ID + + KT L+ + GAIM AS++ Sbjct: 233 EIGRATGSEGVMGGQVVDIESEGDPSIDLETLEWVHIHKTAVLLECSVVCGAIMGGASED 292 Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232 + ER R + +G++FQ+ DD+LD + Sbjct: 293 DIERARRYARCVGLLFQVVDDILDVSQ 319 >gi|329123445|ref|ZP_08252009.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116] gi|327471027|gb|EGF16482.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116] Length = 296 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 133/240 (55%), Gaps = 19/240 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A+ YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMEYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQDEF--IDET 175 L ++AFEI++ NI S+ L+ L G QGM GQ LD+ E I Sbjct: 117 ALQSFAFEILTKTP-----NISSEQKLALIKILAQGAGAQGMCLGQSLDLISEHKQISLN 171 Query: 176 QVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ +I + KTGAL+ A + G I + A + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 172 ELELIHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis] gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media] gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media] gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana] Length = 393 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 121/201 (60%), Gaps = 5/201 (2%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++ +++ ++RY+LL GGK++R L L + A+ A+E IH SLIHDDL Sbjct: 123 EYPEKIHESMRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDL 182 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LT 151 P MDN RRGKPT H + E TA++AG+ LL++AFE I+ ++ + R+ ++S L Sbjct: 183 PCMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELG 242 Query: 152 HNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 IG QG++GGQ++DI D +D + I KT L+ + SG I+ A+++E Sbjct: 243 KTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVSGGILGGATEDEIA 302 Query: 209 RLRCFGENLGIIFQLADDLLD 229 R+R + +G++FQ+ DD+LD Sbjct: 303 RIRRYARCVGLLFQVVDDILD 323 >gi|303239901|ref|ZP_07326424.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2] gi|302592611|gb|EFL62336.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2] Length = 297 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 93/243 (38%), Positives = 133/243 (54%), Gaps = 20/243 (8%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRL----LSAIRYALL-GGKKIRSFLVTECAS 63 +EN +R +++ L + ND L SA+RY+LL GGK++R L Sbjct: 3 FKENQQRYADLVNAFL-----DNYVKENDLLEKSVYSAMRYSLLAGGKRLRPVLALAVCE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + + AIE +H YSLIHDDLP+MDN RRGK T H ++ E AI+AG+GL Sbjct: 58 LLGGDINEVMPFACAIEMVHTYSLIHDDLPAMDNDDFRRGKLTNHKKFGEAIAILAGDGL 117 Query: 124 LTYAFEI-ISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQV 177 L AFE+ I S T +N + + M + + G+ GM+ GQ++D + E + ET Sbjct: 118 LNLAFELMIESTATDNCNNAVQKVKAMSYIAKSSGIHGMIAGQVIDTESENKEVAYETLE 177 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 +M K KTGAL+ S AI+ +AS+ + L + NLG+ FQ+ DD+LD E E L Sbjct: 178 YM-HKCKTGALIKAPVVSSAIICNASEEDLRSLEAYAGNLGLAFQIKDDILDVEGSTEKL 236 Query: 235 PKK 237 KK Sbjct: 237 GKK 239 >gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis] Length = 383 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 120/202 (59%), Gaps = 7/202 (3%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++ +++ A+RY+LL GGK++R L L + A+ A+E IH SLIHDDL Sbjct: 113 RYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGSEELAMPTACAMEIIHTMSLIHDDL 172 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSL 150 P MDN +RRGKPT H + E TA++AG+ LL++AFE +S+ KT D + +++ L Sbjct: 173 PPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKTVESDRVL-RVVSEL 231 Query: 151 THNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 IG +G+ GGQ+ DI + + + I KT L+ + SGAI+ AS +E Sbjct: 232 GRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHKTAVLLECSVASGAIIGGASDDEI 291 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 ER+R + +G++FQ+ DD+LD Sbjct: 292 ERVRKYARCVGLLFQVVDDILD 313 >gi|260776529|ref|ZP_05885424.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260607752|gb|EEX34017.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 294 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 89/241 (36%), Positives = 130/241 (53%), Gaps = 20/241 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ L S Q N+++++ L+ L L+ A+RY LL GGK+ R FLV Sbjct: 1 MHEALTSLQQRNNRQLERWLNQL---------PHQEQPLIEAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKLEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FID 173 G+ L T AF I++ SP+ + R +++ +L G GM GQ LD+ E + Sbjct: 112 GDALQTLAFTILADGELSPEAE---TYRIKMVKALAEASGANGMCLGQALDLSAEGQKVS 168 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEE 232 ++ I + KTGALM A GA+ A +E +L F + +G+ FQ+ DD+LD Sbjct: 169 LAELENIHRNKTGALMKCAIRLGALAAGQKGSEILPQLDQFADAIGLAFQVQDDILDIIS 228 Query: 233 D 233 D Sbjct: 229 D 229 >gi|116331899|ref|YP_801617.1| geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116125588|gb|ABJ76859.1| Geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 313 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 124/220 (56%), Gaps = 14/220 (6%) Query: 26 QTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 QT S + Q L A++Y+L+ GGK++R LV L +G+++ECIH Sbjct: 24 QTLSILSEQSAPELFEAMKYSLVAGGKRLRPVLVLAAFGGSQNETRNTLLLGSSLECIHT 83 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSLIHDDLPSMDN RRG PT+H ++ E TAI+ G+ L ++AF IS + +D Sbjct: 84 YSLIHDDLPSMDNDDFRRGLPTLHKRFSEATAILTGDALNSFAFYFISLIQGDNEDYFLH 143 Query: 145 QLMLSLTHN-IGLQGMLGGQMLDIQDEF---------IDETQVFMIQ---KMKTGALMCF 191 + +L + H G GM+ GQ+ D+Q E ++ +V M+Q ++KTGAL+ Sbjct: 144 RDLLEILHTGCGAPGMVSGQIYDLQMERENTKNRNSKSEQEKVAMVQLTHRLKTGALIKA 203 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A G + + + L +GE+LG++FQ+ DD+LD E Sbjct: 204 ALLLGNRLRKDWKKREGPLSKYGEDLGLLFQITDDILDVE 243 >gi|116327487|ref|YP_797207.1| geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120231|gb|ABJ78274.1| Geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 313 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 124/220 (56%), Gaps = 14/220 (6%) Query: 26 QTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 QT S + Q L A++Y+L+ GGK++R LV L +G+++ECIH Sbjct: 24 QTLSILSEQSAPELFEAMKYSLVAGGKRLRPVLVLAAFGGSQNETRNTLLLGSSLECIHT 83 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSLIHDDLPSMDN RRG PT+H ++ E TAI+ G+ L ++AF IS + +D Sbjct: 84 YSLIHDDLPSMDNDDFRRGLPTLHKRFSEATAILTGDALNSFAFYFISLIQGDNEDYFLH 143 Query: 145 QLMLSLTHN-IGLQGMLGGQMLDIQDEF---------IDETQVFMIQ---KMKTGALMCF 191 + +L + H G GM+ GQ+ D+Q E ++ +V M+Q ++KTGAL+ Sbjct: 144 RDLLEILHTGCGAPGMVSGQIYDLQMERENTKNRNSKSEQEKVAMVQLTHRLKTGALIKA 203 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A G + + + L +GE+LG++FQ+ DD+LD E Sbjct: 204 ALLLGNRLRKDWKKREGPLSKYGEDLGLLFQITDDILDVE 243 >gi|91793921|ref|YP_563572.1| polyprenyl synthetase [Shewanella denitrificans OS217] gi|91715923|gb|ABE55849.1| farnesyl-diphosphate synthase [Shewanella denitrificans OS217] Length = 293 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/187 (43%), Positives = 111/187 (59%), Gaps = 2/187 (1%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 AL+GGK+IR FLV + V AAIECIH YSLIHDDLP+MD+ +RRGKP Sbjct: 39 ALMGGKRIRPFLVYAIGQMLKVPLEKLDNAAAAIECIHAYSLIHDDLPAMDDDDLRRGKP 98 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVHI ++E AI+AG+ L + AFE+++ + + ++ L G QGM GGQ + Sbjct: 99 TVHIAFNEAQAILAGDALQSLAFELMTESQADTSPTQQLHMVKVLAKAAGYQGMCGGQAI 158 Query: 166 DIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D+ ++ ID Q+ + KTGAL+ A E I+A AS E+ L F LG+ FQ+ Sbjct: 159 DLAATNKAIDLAQLTQLHNKKTGALISCAVELAIILADASPVERAHLAQFSHALGLAFQV 218 Query: 224 ADDLLDC 230 DD+LD Sbjct: 219 QDDILDV 225 >gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies] Length = 383 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 120/202 (59%), Gaps = 7/202 (3%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++ +++ A+RY+LL GGK++R L L + A+ A+E IH SLIHDDL Sbjct: 113 RYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGSEELAMPTACAMEIIHTMSLIHDDL 172 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSL 150 P MDN +RRGKPT H + E TA++AG+ LL++AFE +S+ KT D + +++ L Sbjct: 173 PPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKTVESDRVL-RVVSEL 231 Query: 151 THNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 IG +G+ GGQ+ DI + + + I KT L+ + SGAI+ AS +E Sbjct: 232 GRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHKTAVLLECSVASGAIIGGASDDEI 291 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 ER+R + +G++FQ+ DD+LD Sbjct: 292 ERVRKYARCVGLLFQVVDDILD 313 >gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium] Length = 345 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 114/195 (58%), Gaps = 3/195 (1%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ ++RY+LL GGK++R L L + ++A+ A+E IH SL+HDDLP MD Sbjct: 81 KIHESMRYSLLAGGKRVRPILCLASCELVGGDQISAMPAACAVEMIHTMSLMHDDLPCMD 140 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGKPT HI Y E A++AG+ LL++AFE +++ + + + L IG Sbjct: 141 NDDFRRGKPTNHIVYGEEIAVLAGDALLSFAFEHVATATKDVSAERIVRAIGELAKCIGS 200 Query: 157 QGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +G++ GQ++DI E D + I KT AL+ + GAIM S E ERLR F Sbjct: 201 EGLVAGQVVDICSEGADVGLEHLEFIHLHKTAALLEGSVVLGAIMGGGSDVEVERLRKFV 260 Query: 215 ENLGIIFQLADDLLD 229 ++G++FQ+ DD+LD Sbjct: 261 RSIGLLFQVVDDILD 275 >gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211] gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211] Length = 300 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/227 (38%), Positives = 125/227 (55%), Gaps = 14/227 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + R++ LD + + + +L A+RY+LL GGK++R L L Sbjct: 15 LAKEKIRVEAALD-------ASLGPERPKQLREAMRYSLLAGGKRLRPILCLAACELIAG 67 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 TAL AIE IH SLIHDDLPSMDN +RRG+PT H Y + AI+AG+ LLT A Sbjct: 68 ESETALPTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDALAILAGDALLTRA 127 Query: 128 FEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183 FE++S SP + I+ LSL G G++GGQ+ D++ E +D + I Sbjct: 128 FEMVSLRSPGISAERLIKVVGELSLVA--GAPGLVGGQVADLECEGKDVDIDTLEYIHIH 185 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTGAL+ + GA++ A + + LR + E +G+ FQ+ DD+LD Sbjct: 186 KTGALLKASVVCGALIGGAKDDLLDALRTYAEAIGLAFQIIDDILDV 232 >gi|148359869|ref|YP_001251076.1| geranyltranstransferase [Legionella pneumophila str. Corby] gi|296107919|ref|YP_003619620.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy] gi|148281642|gb|ABQ55730.1| geranyltranstransferase [Legionella pneumophila str. Corby] gi|295649821|gb|ADG25668.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy] Length = 298 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 122/207 (58%), Gaps = 24/207 (11%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ SA+ YAL GGK+IR LV L +V+ + AA+E HCYSLIHDDLP+MD Sbjct: 30 KIRSALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154 N +RRGKP+ H +DE TAI+ G+G+ A E++ T+L + + ++++T + Sbjct: 90 NDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVV---LTRLSPLLPAAQVVAITQVLVN 146 Query: 155 --GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALM--CFACESGAIMAHASQNE- 206 G+ GM+ GQ LD+ + + E Q+ I +KTG L+ CF M A+QNE Sbjct: 147 ASGISGMVSGQSLDLSELAKLSVTEEQLREIHLLKTGKLILACFE------MVLAAQNEI 200 Query: 207 ----KERLRCFGENLGIIFQLADDLLD 229 K LR +G+++G++FQ+ DD LD Sbjct: 201 SEQIKSALRTYGKHIGLVFQMQDDYLD 227 >gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753] gi|156866965|gb|EDO60337.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753] Length = 293 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 5/200 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 ++ A+ Y+LL GGK+IR L E + + A+ A+E IH YSLIHDDLP MDN Sbjct: 29 VIEAMEYSLLAGGKRIRPTLTLEFCRVCGGDVQAAMPFACAVEMIHSYSLIHDDLPCMDN 88 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIR-SQLMLSLTHNIG 155 +RRG+P HIQY E A++AG+GLLT AFE SP++ +L R ++ L G Sbjct: 89 SDLRRGRPANHIQYGEDIALLAGDGLLTLAFETALSPESIKLAGAQRGAEAARLLAKAAG 148 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +GM+GGQ++D+Q E +++ + KTGAL+ A + G +A A Q ++E + Sbjct: 149 AEGMVGGQVIDLQHENQRAPIEVLLEMDRKKTGALIQAAAQMGCAVAGADQKQREAAVEY 208 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 209 AACVGLAFQIRDDILDVISD 228 >gi|254361652|ref|ZP_04977790.1| geranyltranstransferase [Mannheimia haemolytica PHL213] gi|153093170|gb|EDN74186.1| geranyltranstransferase [Mannheimia haemolytica PHL213] Length = 297 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/197 (38%), Positives = 119/197 (60%), Gaps = 6/197 (3%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+ YA LLGGK++R FL+ + V AA+E IH YSL+HDDLP+MD+ Sbjct: 34 LVEAMAYAVLLGGKRVRPFLIYATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDD 93 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPT HI +DE TAI+AG+ L ++AFE++++ L D + + L G + Sbjct: 94 DRLRRGKPTCHIAFDEATAILAGDALQSFAFELLAT-DPHLTDREKVVQVTELATASGAK 152 Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KERLRCF 213 GM GQ LD+ +++ + ++ +I + KTGAL+ + G ++ SQN K+ L + Sbjct: 153 GMCLGQSLDLIAENKAVSLEELELIHRNKTGALILSSVMMGLNLSEYSQNVAIKQPLVNY 212 Query: 214 GENLGIIFQLADDLLDC 230 + +G+ FQ+ DD+LD Sbjct: 213 AKAIGLAFQVQDDILDV 229 >gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba] gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba] gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba] Length = 391 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 122/204 (59%), Gaps = 5/204 (2%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 + T + +++ ++RY+LL GGK++R L L A+ A+E IH +LIH Sbjct: 118 VPTHYPEKIHESMRYSLLAGGKRVRPTLCIAACELVGGTEDLAMPAACAMEMIHTMTLIH 177 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLML 148 DDLP MDN +RRGKPT H + E TA++AG+ LL++AFE I+ ++ ++ R +++ Sbjct: 178 DDLPCMDNDNLRRGKPTNHKAFGEDTAVLAGDALLSFAFEHIARSTSKTVESERVLRVIC 237 Query: 149 SLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 L ++G +G++ GQ++DI D +D + I KT L+ + SGAI+ AS+ Sbjct: 238 ELGKSMGSEGLVAGQIVDIASEGDTSVDLKTLEYIHLHKTAVLLECSVVSGAIIGGASEE 297 Query: 206 EKERLRCFGENLGIIFQLADDLLD 229 E ER R + +G++FQ+ DD+LD Sbjct: 298 EIERTRRYARCVGLLFQVVDDILD 321 >gi|291525241|emb|CBK90828.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale DSM 17629] gi|291529300|emb|CBK94886.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale M104/1] Length = 307 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 12/230 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +LQ+ + I+ +L+ L + + A+ Y++ GGK++R L+ E +F Sbjct: 15 ELQQKVEHINDVLEKFLPAEEGQQRI-----IFEAMNYSVRAGGKRLRPILMEETYHMFG 69 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + AAIE IH YSL+HDDLP+MDN RRGK T H Y E I+AG+ LL Sbjct: 70 GSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLNL 129 Query: 127 AFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-----MI 180 A+E + ++ D ++ L G+ GM+GGQ++D++ E D+ + I Sbjct: 130 AYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKLDFI 189 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++KTGAL+ + GAI+A AS +E R+ LG+ FQ+ DD+LD Sbjct: 190 YRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDV 239 >gi|224476632|ref|YP_002634238.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421239|emb|CAL28053.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus TM300] Length = 292 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 124/219 (56%), Gaps = 8/219 (3%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLTALRVG 76 +++LLLQ+ N L ++RY+L GGK+IR L+ E + N ++ L+ Sbjct: 9 INELLLQSIPLSPLDTN--LEESMRYSLEAGGKRIRPLLLIETLKMLSNNSDYSKGLQTA 66 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E +H YSLIHDDLP+MDN RRGK T H Y E A++AG+ LLT AF +IS+ + Sbjct: 67 LALEMVHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKALLAGDALLTKAFHLIST-DS 125 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 L R +L+ L+ G GM+GGQ LD++ E I + I K KTGAL+ +A Sbjct: 126 LLDAEARIKLVEGLSDASGHLGMIGGQTLDMESENKQIPLETLQQIHKEKTGALLTYAIM 185 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + + L + E+LG+IFQ+ DDLLD D Sbjct: 186 AAVTIVKPPNEISDILNNYSEHLGLIFQIKDDLLDVYGD 224 >gi|148825981|ref|YP_001290734.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittEE] gi|229846704|ref|ZP_04466811.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 7P49H1] gi|148716141|gb|ABQ98351.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittEE] gi|229810193|gb|EEP45912.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 7P49H1] Length = 296 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GNFSEELQQVQIRINRFLEAQFDGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L ++AFEI++ +P + + L+ L G+QGM GQ LD+ E I +++ Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 +I + KTGAL+ A + G I + H + E+ L + E +G+ FQ+ DD+LD E D Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|269214464|ref|ZP_06158593.1| geranyltranstransferase [Neisseria lactamica ATCC 23970] gi|269209749|gb|EEZ76204.1| geranyltranstransferase [Neisseria lactamica ATCC 23970] Length = 292 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/196 (38%), Positives = 117/196 (59%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV + L + AAIE IH YSL+HDD+P+MDN + Sbjct: 33 AMRYAVLDGGKRLRPMLVLAASELGESVADAVGQAMAAIEMIHAYSLVHDDMPAMDNDSL 92 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H++Y E TA++ G+ L T AF+++S P T+L + ++ L G +GM Sbjct: 93 RRGKPTCHVKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMA 151 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + + + +KTGAL+ A G++ + S++ L + L Sbjct: 152 GGQAIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLGSMSCPNLSEDSLAILDDYAAKL 211 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 212 GLAFQVIDDVLDCEAD 227 >gi|259909275|ref|YP_002649631.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96] gi|224964897|emb|CAX56420.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96] gi|283479330|emb|CAY75246.1| geranyltranstransferase [Erwinia pyrifoliae DSM 12163] Length = 299 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 116/204 (56%), Gaps = 13/204 (6%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++A+ Y ALLGGK++R FLV + N AAIECIH YSLIHDDLP+MDN Sbjct: 32 LVNAMEYGALLGGKRLRPFLVYATGDMLRANDAALDAPAAAIECIHAYSLIHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E AI+AG+ L T AF I++ +P + R ++ L G+ Sbjct: 92 DSLRRGQPTCHIKFGEEAAILAGDALQTLAFSILADAPMPGVVAESRIAMLSELAQASGV 151 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209 GM GGQ LD+ E T ++ I + KTGAL+ A GA+ A E+ R Sbjct: 152 AGMCGGQALDLAAEGKQVTLNELEQIHRHKTGALIRSAVRLGALTA----GERGRAALPA 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L F +G+ FQ+ DD+LD D Sbjct: 208 LDRFANAIGLAFQVQDDILDVTGD 231 >gi|184155736|ref|YP_001844076.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956] gi|227515672|ref|ZP_03945721.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931] gi|260663547|ref|ZP_05864437.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN] gi|183227080|dbj|BAG27596.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956] gi|227085975|gb|EEI21287.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931] gi|260552088|gb|EEX25141.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN] Length = 291 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 121/217 (55%), Gaps = 10/217 (4%) Query: 19 ILDDLLLQTASHMQTQHNDRLL-SAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL-RV 75 ++DD L A+H+ + LL ++ Y+LL GGK++R L A L L R Sbjct: 11 VVDDYL---ATHLAGACDQPLLEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRA 67 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E IH YSLIHDDLP+MDN +RRGKPT H Y A +AG+GLLT AFE +S Sbjct: 68 ACALELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSD-- 125 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFAC 193 QLK +R +L+ L G GM+ GQ D+ + + Q+ + + KTGAL+ +A Sbjct: 126 NQLKAPVRLRLVQELAKAAGPAGMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAV 185 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +G ++A + L FGE G+ FQ+ DD+LD Sbjct: 186 LAGGLIAEQETAVLDCLTTFGEAYGLAFQIYDDILDV 222 >gi|319897071|ref|YP_004135266.1| geranyltranstransferase [Haemophilus influenzae F3031] gi|317432575|emb|CBY80935.1| geranyltranstransferase [Haemophilus influenzae F3031] Length = 296 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L ++AFEI++ +P + + L+ L G+QGM GQ LD+ E I +++ Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 +I + KTGAL+ A + G I + H + E+ L + E +G+ FQ+ DD+LD E D Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|238924568|ref|YP_002938084.1| geranyltranstransferase [Eubacterium rectale ATCC 33656] gi|238876243|gb|ACR75950.1| geranyltranstransferase [Eubacterium rectale ATCC 33656] Length = 307 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/230 (34%), Positives = 124/230 (53%), Gaps = 12/230 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +LQ+ + I+ +L+ L ++ + A+ Y++ GGK++R L+ E +F Sbjct: 15 ELQQKVEHINNVLEKFL-----PVEEGQQRIIFEAMNYSVRAGGKRLRPILMEETYHMFG 69 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + AAIE IH YSL+HDDLP+MDN RRGK T H Y E I+AG+ LL Sbjct: 70 GSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLNL 129 Query: 127 AFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-----MI 180 A+E + ++ D ++ L G+ GM+GGQ++D++ E D+ + I Sbjct: 130 AYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKLDFI 189 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++KTGAL+ + GAI+A AS +E R+ LG+ FQ+ DD+LD Sbjct: 190 YRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDV 239 >gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200] gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200] Length = 296 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 86/224 (38%), Positives = 135/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 L A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 LGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229 >gi|320157198|ref|YP_004189577.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio vulnificus MO6-24/O] gi|319932510|gb|ADV87374.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O] Length = 294 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/241 (36%), Positives = 130/241 (53%), Gaps = 28/241 (11%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L S Q N+++++ LD L N L+ A+RY L LGGK+ R FLV Sbjct: 5 LASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVYATGE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + +AIECIH YSLIHDDLP+MD+ +RRG+PT H+++DE TAI+ G+ L Sbjct: 56 MLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILTGDAL 115 Query: 124 LTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177 T AF I++ SP + + R ++ +L G QGM GQ LD+ ++ + ++ Sbjct: 116 QTLAFTILAEGTLSPDGETQ---RVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEEL 172 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEK-----ERLRCFGENLGIIFQLADDLLDCEE 232 I + KTGAL+ A GA+ A EK +L + +G+ FQ+ DD+LD Sbjct: 173 EEIHRNKTGALIRCAVRLGALAA----GEKGLAILPQLEKYSTAIGLAFQVQDDILDIIS 228 Query: 233 D 233 D Sbjct: 229 D 229 >gi|260424661|ref|ZP_05778957.1| geranyltranstransferase [Dialister invisus DSM 15470] gi|260402735|gb|EEW96282.1| geranyltranstransferase [Dialister invisus DSM 15470] Length = 287 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 123/201 (61%), Gaps = 12/201 (5%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 +D L ++++Y+L+ GGK+IR L + V+ + V A+EC+H YSLIHDDLP Sbjct: 23 HDSLYASMQYSLMAGGKRIRPCLFLVLLDILGVDSNLYINVACALECVHTYSLIHDDLPG 82 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI----RSQLMLSL 150 MDN RRGK H +Y A +AG+GLLTYAFE+++ ++NI R L+ L Sbjct: 83 MDNDDYRRGKLANHKKYGVGIATMAGDGLLTYAFELLAC-----ENNISFFKRIALIKIL 137 Query: 151 THNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 T G GM+GGQ D + + + +++ + + KTG L+C + + + +A S+N+KE Sbjct: 138 TAAAGPAGMVGGQAHDKGAEGKTLSLSELMFLDQCKTGKLICASLDMASEIAGLSKNDKE 197 Query: 209 RLRCFGENLGIIFQLADDLLD 229 + +G+++G++FQ+ DDLLD Sbjct: 198 AIHTYGKHIGLLFQITDDLLD 218 >gi|238898686|ref|YP_002924367.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466445|gb|ACQ68219.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 312 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 85/230 (36%), Positives = 130/230 (56%), Gaps = 16/230 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66 +L + KR++T L L + ++ N LL +RY+ L+GGK++R +LV + Sbjct: 19 QLSKYQKRVETYLSSALDKLPAY-----NTVLLDVMRYSTLMGGKRLRPYLVYATGQMLG 73 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ AAIECIH YSL+HDDLPSMDN +RRG+ T H+++ E AI+AG+ L + Sbjct: 74 LSLSNLDAPAAAIECIHSYSLLHDDLPSMDNDDLRRGELTGHVKFGEANAILAGDSLQSL 133 Query: 127 AFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMI 180 AF I++ P +D R ++ L G GM GGQ LD+ E++D ET + +I Sbjct: 134 AFSILADDRMPDVVTED--RLAMLSELARASGATGMCGGQALDMASEYLDISLET-LELI 190 Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ A GA+ A + L + +++G+ FQ+ DD+LD Sbjct: 191 HHHKTGALLRAAVRLGALAAGETGRKALPWLDQYAKSIGLAFQVQDDILD 240 >gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps) [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps) [Thermodesulfovibrio yellowstonii DSM 11347] Length = 295 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/217 (40%), Positives = 125/217 (57%), Gaps = 24/217 (11%) Query: 29 SHMQTQHNDRLL-SAIRYALL-GGKKIRSFL----VTECASLFNVNHLTALRVGAAIECI 82 S+ QT +L ++ Y+L GGK++R L C + N+ + AIE I Sbjct: 22 SYFQTFPTPPILHDSVLYSLTAGGKRLRPILCIASYEACDGMENI-----VPYATAIEFI 76 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-- 140 H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF I+S+ KD Sbjct: 77 HTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEGIAILAGDGLLTEAFTILSN-----KDYA 131 Query: 141 NIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 NI S +L + I GL+GM+ GQ D+ E DE V I KT A++ + + Sbjct: 132 NISSNTLLKVISEISKAAGLRGMVAGQAYDLISEGKEPDERVVEFIHLYKTAAMIKASVK 191 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 GAI+A AS+ + + L +G+++G+ FQ+ DD+LD E Sbjct: 192 VGAILAEASEEKIKNLEIYGQSIGLAFQIVDDILDIE 228 >gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM 8271] gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM 8271] Length = 289 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 116/205 (56%), Gaps = 6/205 (2%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 + + ND L ++ Y L+ GGK++R L A + + +E IH YSLIH Sbjct: 20 LPWKANDVLSESMAYTLMAGGKRVRPVLALAAAEIVGGAPEVVIPCACGLEMIHTYSLIH 79 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLML 148 DDLP++DN RRG+PT H + E TA++AG+GLLTY F++++S L+ I+ ++ Sbjct: 80 DDLPALDNDDYRRGRPTNHKVFGEATALLAGDGLLTYGFQLLASDVPVPLERQIK--VIR 137 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 +G QGM+ GQ+LD E + +Q+ I +KTGAL+ + GAI+ + E Sbjct: 138 ETAEAVGWQGMVRGQVLDTLGEKGELSVSQITNIHHLKTGALLTASVRLGAILGGGLEEE 197 Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231 +L + LG+ FQ+ DD+LD E Sbjct: 198 IRQLSIYAAALGLAFQIKDDILDIE 222 >gi|325203376|gb|ADY98829.1| geranyltranstransferase [Neisseria meningitidis M01-240355] Length = 298 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/196 (39%), Positives = 115/196 (58%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT HI+Y E A++ G+ L T AF++++ P + L + + ++ L G +GM Sbjct: 99 RRGKPTCHIKYGEANALLTGDALQTQAFDVLARP-SGLPASRQLAMLSVLAKAGGSRGMA 157 Query: 161 GGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + Q + Q +KTGAL+ A GA+ + S++ L + L Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|224825912|ref|ZP_03699016.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] gi|224602136|gb|EEG08315.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] Length = 298 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 112/189 (59%), Gaps = 4/189 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RY+ L GGK++R LV L + N R+GAA+E IH YSL+HDD+P MD Sbjct: 34 RLHEAMRYSTLDGGKRVRPLLVHAAGELVSANPEHLARIGAAVEMIHAYSLVHDDMPCMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPT H+ +D+ TA++ G+ L T AF+++++P + + +++ +L G Sbjct: 94 DDVLRRGKPTCHVAFDDATALLVGDALQTLAFDVLATPLDGVAAAAQLEMVRTLARASGH 153 Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213 GM GGQ +D+ + + ++ + +KTGAL+ A GA+ S E ERL F Sbjct: 154 GGMAGGQAIDLASVGQTLSLPELEYMHCLKTGALIRAAVLLGALAGTPLSAEETERLDHF 213 Query: 214 GENLGIIFQ 222 + +G+ FQ Sbjct: 214 AKRIGLAFQ 222 >gi|55821223|ref|YP_139665.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus LMG 18311] gi|55823135|ref|YP_141576.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus CNRZ1066] gi|55737208|gb|AAV60850.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus LMG 18311] gi|55739120|gb|AAV62761.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus CNRZ1066] Length = 290 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/225 (36%), Positives = 127/225 (56%), Gaps = 10/225 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K+ID + D + + + L+ AI Y++ GGK+IR + + F + + Sbjct: 5 KKIDAAIRDFYQKKTPPVSSD----LIIAILYSVDSGGKRIRPLIFLDLLEGFGLELTPS 60 Query: 73 -LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 V A++E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L F ++ Sbjct: 61 HFDVAASLEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDPFALV 120 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 + +T+L IR QL+ +L+H G GM+GGQMLD++ E +D +Q+ I + KTG L+ Sbjct: 121 A--QTELSAEIRVQLIHALSHASGTFGMVGGQMLDMKGEGLELDLSQLAKIHENKTGKLL 178 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 F + I+A E L+ G +G+ FQ+ DD+LD D Sbjct: 179 TFPFVAAGIVAQQEDRVMENLQEAGRLIGLAFQVRDDILDVTADF 223 >gi|299783413|gb|ADJ41411.1| Geranyltranstransferase [Lactobacillus fermentum CECT 5716] Length = 311 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 121/217 (55%), Gaps = 10/217 (4%) Query: 19 ILDDLLLQTASHMQTQHNDRLL-SAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL-RV 75 ++DD L A+H+ + LL ++ Y+LL GGK++R L A L L R Sbjct: 11 VVDDYL---ATHLAGACDQPLLEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRA 67 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E IH YSLIHDDLP+MDN +RRGKPT H Y A +AG+GLLT AFE +S Sbjct: 68 ACALELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSD-- 125 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFAC 193 QLK +R +L+ L G GM+ GQ D+ + + Q+ + + KTGAL+ +A Sbjct: 126 NQLKAPVRLRLVQELAKAAGPAGMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAV 185 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +G ++A + L FGE G+ FQ+ DD+LD Sbjct: 186 LAGGLIAEQETAVLDCLTTFGEAYGLAFQIYDDILDV 222 >gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora] gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora] Length = 300 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 114/202 (56%), Gaps = 3/202 (1%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 + T+ L A+RY+LL GGK++R L L N A+ A+E IH SLIH Sbjct: 30 LGTERPTSLSEAMRYSLLAGGKRLRPILCLAACELAGGNVAAAMPTAVALEMIHTMSLIH 89 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP+MDN +RRG+PT H Y E TAI+AG+ LLT AFEI++ + +++ Sbjct: 90 DDLPAMDNDDLRRGRPTNHKVYGEATAILAGDALLTRAFEIVALRSPGVSPECILKVIGE 149 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L+ G G++GGQM+D++ E ++ + I KTGAL+ G ++ AS Sbjct: 150 LSLAAGAPGLVGGQMVDLESEGKEVNLDTLEYIHLHKTGALLSACVICGGLIGDASDELL 209 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 + LR + +G+ FQ+ DD+LD Sbjct: 210 QALRNYARGIGLAFQIIDDILD 231 >gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana CCMP1335] gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana CCMP1335] Length = 339 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 120/219 (54%), Gaps = 7/219 (3%) Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L+ + + D++ ++ Y+L+ GGK+IR L +F + A+ A+E IH Sbjct: 62 LEASVKSRIPQTDKICESMAYSLMAGGKRIRPVLCIAACEMFGGSQDVAMPTAVALEMIH 121 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 SLIHDDLPSMDN +RRGKPT H+ + E AI+AG+ LL+ +FE ++ + Sbjct: 122 TMSLIHDDLPSMDNDDLRRGKPTNHVVFGEDVAILAGDSLLSTSFEHVARETKGVSAEKI 181 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMA 200 ++ L ++G +G+ GGQ++D++ E T + I KT L+ A SGA++ Sbjct: 182 VDVIARLGKSVGAEGLAGGQVMDLECEAKPGTTLDDLKWIHIHKTATLLQVAVASGAVLG 241 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A+ E F N+G+ FQ+ADD+LD EDL K Sbjct: 242 GATPEEVAACELFAMNIGLAFQVADDILDVTASSEDLGK 280 >gi|292487451|ref|YP_003530323.1| geranyltranstransferase [Erwinia amylovora CFBP1430] gi|291552870|emb|CBA19915.1| geranyltranstransferase [Erwinia amylovora CFBP1430] Length = 264 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 80/192 (41%), Positives = 109/192 (56%), Gaps = 4/192 (2%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 ALLGGK++R FLV + + AAIECIH YSLIHDDLP+MDN +RRG+P Sbjct: 5 ALLGGKRLRPFLVYATGDMLRADDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQP 64 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T HI++ E +AI+AG+ L T AF I++ +P + R ++ L G+ GM GGQ Sbjct: 65 TCHIKFGEESAILAGDALQTLAFSILADAPMPGVMAESRIAMLSELAQASGVAGMCGGQA 124 Query: 165 LDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIF 221 LD+ E T ++ I + KTGAL+ A GA+ A S L F +G+ F Sbjct: 125 LDLAAEGKKVTLNELEQIHRHKTGALIRSAVRLGALTAGESGRAALPALDRFANAIGLAF 184 Query: 222 QLADDLLDCEED 233 Q+ DD+LD D Sbjct: 185 QVQDDILDVTGD 196 >gi|149377246|ref|ZP_01894993.1| geranyltranstransferase [Marinobacter algicola DG893] gi|149358434|gb|EDM46909.1| geranyltranstransferase [Marinobacter algicola DG893] Length = 299 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 121/204 (59%), Gaps = 5/204 (2%) Query: 34 QHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q ++RL A+RY++LGG K+IR L A+ +A+ ++E IH YSLIHDDL Sbjct: 32 QGSERLQQAMRYSVLGGGKRIRPALCLAAATALGQPRESAIVPACSLELIHAYSLIHDDL 91 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN +RRG+ T HI +DE TAI+AG+ L T AF ++ + D +R ++ L Sbjct: 92 PAMDNDDLRRGRATTHIAFDEATAILAGDALQTLAFGWLAEAPG-VDDQVRLAMIRELAT 150 Query: 153 NIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G QGM GGQ +D++ + + Q+ + + KTGAL+ + GA+ A ++++ Sbjct: 151 ASGHQGMAGGQAIDLESVGKQLTVEQLENMHRHKTGALIAASVRMGALTATDVNEDQLAA 210 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + + LG+ FQ+ DDLLD E D Sbjct: 211 LTVYSQTLGLAFQVQDDLLDIEGD 234 >gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa] gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa] Length = 365 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 80/233 (34%), Positives = 126/233 (54%), Gaps = 12/233 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQT--------QHNDRLLSAIRYALL-GGKKIRSFLVT 59 LQE+ ++ +LQ A+ + + ++ ++RY+LL GGK++R L Sbjct: 63 LQEDQRKPTFDFKSYMLQKANSVNKALDAAVSLKEPAKIHESMRYSLLAGGKRVRPVLCL 122 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L + AL A+E IH SL+HDDLP MDN +RRGKPT HI + E A++A Sbjct: 123 AACDLVGGSESMALPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLA 182 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---Q 176 G+ LL++AFE I+ + + + L IG +G++ GQ++DI E + E Q Sbjct: 183 GDALLSFAFEHIAVSTIHVSPLRIVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVGLEQ 242 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + I KT L+ A GAI+ + E E+LR + ++G++FQ+ DD+LD Sbjct: 243 LEFIHVHKTAKLLEGAVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILD 295 >gi|114320106|ref|YP_741789.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1] gi|114226500|gb|ABI56299.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1] Length = 306 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 84/222 (37%), Positives = 122/222 (54%), Gaps = 10/222 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73 R++ LD L + +H RL A+RY AL GGK++R LV Sbjct: 23 RVEQALDYWLPEAQTHPA-----RLHQAMRYSALSGGKRLRPILVFATGQALGAAPTLLD 77 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132 A+ECIH YSLIHDDLP+MD+ +RRG+PT H +DE TAI+AG+ L T AF I++ Sbjct: 78 GPACAVECIHAYSLIHDDLPAMDDDELRRGQPTCHKAFDEATAILAGDALQTLAFHILAH 137 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190 P R +++ L G +GM GGQ +D+ + +D Q+ + KTGAL+ Sbjct: 138 DPGGVQNSRARLRMVEVLALAAGSRGMAGGQAIDLAATGQQLDVAQLEDMHIHKTGALIR 197 Query: 191 FACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCE 231 + + GA+ A E +RL +G+ +G+ FQ+ DD+LD E Sbjct: 198 ASVQLGALAASPVDEELLQRLDHYGKCIGLAFQIRDDILDVE 239 >gi|323340824|ref|ZP_08081076.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644] gi|323091947|gb|EFZ34567.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644] Length = 299 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 11/212 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT-ECASLFNVNHLTALRVGAAI 79 D+ LQ +T H+ ++ Y++ GGK+IR ++ C S L V A++ Sbjct: 22 DVYLQQLDTRKTLHD-----SMSYSVDAGGKRIRPMIIMLVCDSFKKKIDQDVLDVCASL 76 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H YSLIHDDLP+MDN +RRGK T H+ + E AI+AG+GLLT AFE + +T + Sbjct: 77 EFVHTYSLIHDDLPAMDNDELRRGKATNHVVFGESMAILAGDGLLTTAFECLG--QTSIS 134 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGA 197 + LM L G QGM+ GQ+ DI++E + T Q+ + KTGAL+ +A ESG Sbjct: 135 AKTKCTLMSRLAFAAGPQGMVNGQVGDIENEGVKLTLPQLRNVHAQKTGALLRYAFESGG 194 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I+A S L+ G G+ FQ+ DD++D Sbjct: 195 ILAGVSDRALGELKELGNCFGLAFQIYDDIMD 226 >gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1] gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1] Length = 337 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 126/222 (56%), Gaps = 10/222 (4%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT-AL 73 I+ LD+ ++ T + ++++ A++Y+L+ GGK+IR L +FN T A+ Sbjct: 55 IEKALDESVVST-----EKETEKIVEAMKYSLMAGGKRIRPVLCLAACEMFNDGDSTPAM 109 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++E IH SLIHDDLPSMDN +RRGKPT H+ Y E AI+AG+ LL+ +F ++ Sbjct: 110 PAAVSLEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILAGDALLSDSFRHVAE 169 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190 + + +++ L ++G +G+ GGQ++D++ E + I KT L+ Sbjct: 170 QTKGVAADRVLDVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLEDLRWIHTHKTATLLQ 229 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A SGAI+ AS E + F N+G+ FQ+ADD+LD + Sbjct: 230 VAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQ 271 >gi|42520989|ref|NP_966904.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410730|gb|AAS14838.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 335 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 15/185 (8%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+++ + ++L+SA+RY LL K IRSFLV + +FN + V AAIE Sbjct: 10 LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H YSLIHDDLP MDN RR + + H ++DE TA++AG+ LLT AFE++SS + Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEK---- 125 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQKMKTG-------ALMC-FA 192 R +++ L+ IG++GM+GGQ LDI E ID Q +IQ TG ++ C Sbjct: 126 -RCEIIKVLSQAIGIRGMVGGQALDINSEHIDFSPQPSVIQVADTGIQKALPTSISCKKP 184 Query: 193 CESGA 197 C+SGA Sbjct: 185 CDSGA 189 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 10/76 (13%) Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GM GQ I++ I MKT L +CE GAI+ A+ +++ L +G NL Sbjct: 220 GMTSGQADKIKE----------IHLMKTAKLFAASCEIGAIIGGATDKQRKALYNYGINL 269 Query: 218 GIIFQLADDLLDCEED 233 G+IFQ DD+ D E+D Sbjct: 270 GLIFQAKDDIEDYEQD 285 >gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] Length = 290 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +L++ ++ +D+ L T + L ++ Y+L GGK+IR L A Sbjct: 6 ELEDYARLVDSYLAQFPWPTGT---------LAESMNYSLSAGGKRIRPVLALAAAHAVG 56 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + L A+E IH YSLIHDDLP+MDN RRG+ H + E AI+AG+ LLTY Sbjct: 57 GDCEDILPAVCALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGQAILAGDALLTY 116 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 AFE+++ P + + + + + + G +GM+GGQMLD++ E ++ ++ + ++K Sbjct: 117 AFELLAQPMSGVDSQRQLRAVREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVHRLK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TGA++ A GAI+A ++ + E L + + +G+ FQ+ DD+LD E D Sbjct: 177 TGAILVVAARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESD 225 >gi|78776538|ref|YP_392853.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251] gi|78497078|gb|ABB43618.1| farnesyl-diphosphate synthase [Sulfurimonas denitrificans DSM 1251] Length = 282 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/187 (40%), Positives = 111/187 (59%), Gaps = 6/187 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R L+ + +N + A AIE +H YSLIHDDLP+MDN +RRG+PT+ Sbjct: 33 GGKRFRPALLLGVVNAYNPLMIGGAYHAAYAIELLHTYSLIHDDLPAMDNSPLRRGEPTL 92 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H+ +DEVTAI+AG+ L TYAFE++S+ D R +L+ L N GL GM+ GQ +D Sbjct: 93 HVLFDEVTAILAGDALNTYAFEVLSN--APFSDFTRVELIRELATNGGLNGMVLGQAIDC 150 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ + V ++ KT L+ + + GAI+ + E L FG LG++FQ+ D Sbjct: 151 YFENRVLSIDDVKILHTNKTAKLIAASLKMGAIIV-GEEKLAETLYDFGIKLGLLFQIQD 209 Query: 226 DLLDCEE 232 D+LD + Sbjct: 210 DILDVTQ 216 >gi|167756949|ref|ZP_02429076.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402] gi|237734652|ref|ZP_04565133.1| geranyltranstransferase [Mollicutes bacterium D7] gi|167703124|gb|EDS17703.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402] gi|229382472|gb|EEO32563.1| geranyltranstransferase [Coprobacillus sp. D7] Length = 282 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 122/201 (60%), Gaps = 7/201 (3%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + ++ A++Y+L+ GGK+IR ++ + ++ N+ L + AIE IH YSLIHDDLP Sbjct: 21 DSKVKEAMKYSLMAGGKRIRPVMMLQVIRSYDKNYQDYLDIACAIEMIHTYSLIHDDLPG 80 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN +RRG+ T H Q+DE TAI+AG+ LL A +I KT++ D ++ L+ +L Sbjct: 81 MDNDDLRRGRLTCHKQFDEATAILAGDALLNEAVNVI--IKTKVPDELKISLLATLYQAS 138 Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G+ GM+ GQ LD++ E Q+ +I KTG L+ A + GA++A+ ++++ Sbjct: 139 GINGMILGQALDMEYETKLATRDQLDLIHHHKTGDLISAAMKMGALIANP--DDQKTWVE 196 Query: 213 FGENLGIIFQLADDLLDCEED 233 G +G+ FQ+ DD+LD D Sbjct: 197 IGYKIGLAFQIQDDVLDVVGD 217 >gi|99035065|ref|ZP_01314856.1| hypothetical protein Wendoof_01000303 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 335 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 15/185 (8%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+++ + ++L+SA+RY LL K IRSFLV + +FN + V AAIE Sbjct: 10 LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H YSLIHDDLP MDN RR + + H ++DE TA++AG+ LLT AFE++SS + Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEK---- 125 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQKMKTG-------ALMC-FA 192 R +++ L+ IG++GM+GGQ LDI E ID Q +IQ TG ++ C Sbjct: 126 -RCEIIKVLSQAIGIRGMVGGQALDINSEHIDFSPQPSVIQVADTGIQKALPTSISCKKP 184 Query: 193 CESGA 197 C+SGA Sbjct: 185 CDSGA 189 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 13/89 (14%) Query: 148 LSLTHNIGL---QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 L L H+ G GM GQ I++ I MKT L +CE GAI+ A+ Sbjct: 207 LKLQHSYGCMYDAGMTSGQADKIKE----------IHLMKTAKLFAASCEIGAIIGGATD 256 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 +++ L +G NLG+IFQ DD+ D E+D Sbjct: 257 KQRKALYNYGINLGLIFQAKDDIEDYEQD 285 >gi|226323204|ref|ZP_03798722.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758] gi|225208394|gb|EEG90748.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758] Length = 300 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 79/230 (34%), Positives = 127/230 (55%), Gaps = 12/230 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 +E K +++ LL++ + + +++ A+ Y+++ GGK++R L+ E LF Sbjct: 7 FKEEMKERTEVIEKLLVKYLPKAEG-YQSQIMEAMEYSVMAGGKRLRPMLMQETYRLFGG 65 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AA+E IH YSL+HDDLP+MDN RRG+ T HI Y E I+AG+ LL YA Sbjct: 66 EGKEIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEAMGILAGDALLNYA 125 Query: 128 FEIIS-----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180 FE +P+ L + + + L G+ GM+GGQ++D+ +DE + I Sbjct: 126 FETAVKAFEIAPEKSL---LIGKALKILAEKAGIYGMIGGQVVDVASCGVGLDEGMLNFI 182 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++KTGAL+ + GA++A A E E+++ +GI FQ+ DD+LD Sbjct: 183 YELKTGALIESSMMIGALLAGAEDAELEKVQKIASGVGIAFQIQDDILDV 232 >gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L] gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L] Length = 295 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/230 (34%), Positives = 132/230 (57%), Gaps = 9/230 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +L+E S I+ ++ L + + +T + A+ Y+L GGK++R L+ E L Sbjct: 6 ELKERSIYIEDKIESYLPKEEGYQKT-----IFEAMNYSLRAGGKRLRPILLMEAYKLCQ 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A+E IH YSLIHDDLP++DN +RRGKPT HI + E AI+AG+ LL Sbjct: 61 GQGEDFVPYSVAMEMIHTYSLIHDDLPALDNDDLRRGKPTNHIVFGEAMAILAGDALLNT 120 Query: 127 AFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 A+E ++++ + I + ++ G+ GM+GGQ++D++ E ID+ ++ I Sbjct: 121 AYETMLNAAFKHSRPEISLRAAYEISRGAGIYGMIGGQVVDVESEDKKIDKDKLDYIHMN 180 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT A++ + +GAI+A ++ E L + EN+G+ FQ+ DD+LD E D Sbjct: 181 KTAAMIVGSVRAGAILAGIDEDRLESLTKYAENIGLAFQIVDDILDIEGD 230 >gi|17481244|dbj|BAB79205.1| farnesyl diphosphate synthase [Rhodopseudomonas palustris] Length = 147 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 68/147 (46%), Positives = 95/147 (64%), Gaps = 4/147 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+P+MDN +RRG+PT+H YD+ TAI+AG+ LLT+AF+I++ + +R L Sbjct: 1 HDDMPAMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHNDPTVRLLLTR 60 Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQ 204 L GL GM+GGQMLD+ E F D V +Q+MKTGAL+ + C +GAI+ AS Sbjct: 61 VLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQASP 120 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231 ++ L +G LG FQ+ADD+LD E Sbjct: 121 DQYRALDDYGRALGEAFQIADDILDVE 147 >gi|75250205|sp|Q94ID7|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; Flags: Precursor gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis] Length = 370 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 4/201 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q ++ ++RY+LL GGK++R L L N A+ A+E IH SLIHDDL Sbjct: 101 QEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDL 160 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT HI + E A++AG+ LL +AFE I+ + + + L Sbjct: 161 PCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAK 220 Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 IG +G++ GQ++DI E +D ++ I KT L+ A GAI+ + E E+ Sbjct: 221 AIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEK 280 Query: 210 LRCFGENLGIIFQLADDLLDC 230 LR + ++G++FQ+ DD+LD Sbjct: 281 LRKYARDIGLLFQVVDDILDV 301 >gi|152968946|ref|YP_001334055.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893358|ref|YP_002918092.1| geranyltranstransferase [Klebsiella pneumoniae NTUH-K2044] gi|262042444|ref|ZP_06015604.1| geranyltranstransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150953795|gb|ABR75825.1| geranyltranstransferase (farnesyldiphosphate synthase) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545674|dbj|BAH62025.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040219|gb|EEW41330.1| geranyltranstransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 299 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 13/211 (6%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q N L+ A+ Y ALLGGK++R FLV +F V T AA+ECIH YSL+HD Sbjct: 25 QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGEMFGVCRTTLDAPAAAVECIHAYSLMHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149 DLP+MD+ +RRG PT HI++ E AI+AG+ L T AF I+S +P + D R ++ Sbjct: 85 DLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFSILSDAPMVDVPDRDRLAMVSE 144 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G+ GM GGQ LD+Q E +D + I + KTGAL+ A GA+ S E+ Sbjct: 145 LAQASGVAGMCGGQALDLQAEGQQVDLQALERIHRHKTGALIRAAVRMGAL----SAGER 200 Query: 208 ER-----LRCFGENLGIIFQLADDLLDCEED 233 R L + EN+G+ FQ+ DD+LD D Sbjct: 201 GRAALPALDRYAENIGLAFQVQDDILDVVGD 231 >gi|24379060|ref|NP_721015.1| putative farnesyl diphosphate synthase [Streptococcus mutans UA159] gi|24376957|gb|AAN58321.1|AE014902_9 putative farnesyl diphosphate synthase [Streptococcus mutans UA159] Length = 289 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 121/205 (59%), Gaps = 6/205 (2%) Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSL 87 + QT + L+ A+ Y++ GGK+IR L+ E F + A +V A++E IH SL Sbjct: 16 YAQTHVSQDLIEAVLYSVDAGGKRIRPLLLLEILQGFGLVLTEAHYQVAASLEMIHTGSL 75 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDDLP+MDN RRG+ T H ++ E TAI+AG+ L F +++ K L+ +I+ +L+ Sbjct: 76 VHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLDPFGLLA--KADLRADIKIKLV 133 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 L+ G GM+GGQMLDI+ E + + Q+ I KTG L+ F + I+A S+ Sbjct: 134 AELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLTFPFVAAGIIAELSEK 193 Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230 RLR GE +G+ FQ+ DD+LD Sbjct: 194 ALARLRQVGELVGLAFQVRDDILDV 218 >gi|310766823|gb|ADP11773.1| Geranyltranstransferase [Erwinia sp. Ejp617] Length = 299 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 84/201 (41%), Positives = 115/201 (57%), Gaps = 13/201 (6%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++A+ Y ALLGGK++R FLV + N AAIECIH YSLIHDDLP+MDN Sbjct: 32 LVNAMEYGALLGGKRLRPFLVYATGDMLRANDAALDAPAAAIECIHAYSLIHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E AI+AG+ L T AF I++ +P + R ++ L G+ Sbjct: 92 DSLRRGQPTCHIKFGEEAAILAGDALQTLAFSILADAPMPGVVAESRIAMLSELAQASGV 151 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209 GM GGQ LD+ E T ++ I + KTGAL+ A GA+ A E+ R Sbjct: 152 AGMCGGQALDLAAEGKQVTLNELEQIHRHKTGALIRSAVRLGALTA----GERGRAALPA 207 Query: 210 LRCFGENLGIIFQLADDLLDC 230 L F +G+ FQ+ DD+LD Sbjct: 208 LDRFANAIGLAFQVQDDILDV 228 >gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 299 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 83/207 (40%), Positives = 115/207 (55%), Gaps = 5/207 (2%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 +T H RL A+RY AL GGK++R LV V A+E IH YSLIHD Sbjct: 28 ETTHPARLHEAMRYSALGGGKRVRPVLVYGAGQALGVAPERLDGPACAVELIHVYSLIHD 87 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149 DLP+MDN +RRGKPT H +DE AI+AG+ + AF+I+S L D R ++M + Sbjct: 88 DLPAMDNDDLRRGKPTCHKAFDEAMAILAGDAMQALAFQILSMDPDMLDDPARRLRMMET 147 Query: 150 LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNE 206 L G +GM GGQ +D+ + +D Q+ + KTGAL+ + GA+ A + Sbjct: 148 LARAAGSRGMAGGQAIDLGSVGKQLDIAQLEDMHVHKTGALIRASVLLGALSAPEVDKAH 207 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 E L F + +G+ FQ+ DD+LD E D Sbjct: 208 LENLDRFAKCVGLAFQIRDDILDVEGD 234 >gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus] Length = 316 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 123/223 (55%), Gaps = 11/223 (4%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69 E S+ ++ L+D A ++ H ++ A+RY+LL GGK++R L + N Sbjct: 31 EKSRSVNQALND-----AVSLREPH--KIHEAMRYSLLAGGKRVRPVLCIAACEVVGGNE 83 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 TA+ +IE IH SLIHDDLP MDN +RRGKPT H + E A++AG+ LL +AFE Sbjct: 84 STAMAAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENIAVLAGDALLAFAFE 143 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTG 186 I+ + + + L +IG +G++ GQ++DI E I ++ I KT Sbjct: 144 HIAVSTSGVSPERIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLEFIHLHKTA 203 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AL+ + GAI+ E E+LR F +G++FQ+ DD+LD Sbjct: 204 ALLEGSVVVGAILGGGCNEEVEKLRMFARYIGLMFQVVDDVLD 246 >gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum] Length = 365 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 121/218 (55%), Gaps = 10/218 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 +++ LDD + Q ++ A+RY+LL GGK++R L + + A+ Sbjct: 85 KVNKALDDAI-------PMQEPIKIHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAI 137 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++E IH SLIHDDLP MDN +RRGKPT H + E TA++ G+ LL+ AFE ++S Sbjct: 138 PAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKAFGEDTAVLTGDALLSLAFEHVAS 197 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 + Q + L +G +G++ GQ++DI E + T++ I KTG L+ Sbjct: 198 KTKDVTPQRVVQAVGELGSAVGSKGLVAGQIVDIASEGKQVSLTELEYIHNHKTGKLLEA 257 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A GAI+ ++ E ER+R + LG++FQ+ DD+LD Sbjct: 258 AVVCGAIIGGGNEIEVERMRNYARCLGLLFQVVDDILD 295 >gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula] Length = 372 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 80/228 (35%), Positives = 123/228 (53%), Gaps = 11/228 (4%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S + E + R++ LDD + + ++ A+RY+LL GGK++R L L Sbjct: 83 SYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELV 135 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ LL Sbjct: 136 GGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLA 195 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQK 182 +AFE I+ + + + L +IG +G++ GQ++DI E + + ++ I Sbjct: 196 FAFEHIAVSTVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLEFIHL 255 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KT AL+ A GAI+ S + E+LR F +G++FQ+ DD+LD Sbjct: 256 HKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDV 303 >gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var. palaestina] Length = 310 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 79/234 (33%), Positives = 126/234 (53%), Gaps = 11/234 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ + L E K ++ LD+ +L + +++ A+RY+LL GGK++R L Sbjct: 15 MDFDFKAYLLEKGKSVNQALDNAVL-------IREPEKIHEAMRYSLLAGGKRVRPILCI 67 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N A+ A+E IH SL+HDDLP MDN +RRGKPT H Y E A++A Sbjct: 68 AACELVGGNESMAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLA 127 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---Q 176 G+ LL +AFE +++ + + + + L +IG +G++ GQ++DI + Sbjct: 128 GDALLAFAFEYVANATVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDH 187 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + I KT AL+ + GAI+ + + ERLR F +G++FQ+ DD+LD Sbjct: 188 LEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDV 241 >gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72] gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72] Length = 300 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 5/201 (2%) Query: 37 DRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RL A+RYA+LGG K++R LV ++ R+ A+E IH YSL+HDD+P M Sbjct: 36 ERLHEAMRYAVLGGGKRVRPLLVHAAGAIGGAQPERLDRIACAVELIHAYSLVHDDMPCM 95 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNI 154 D+ +RRGKPTVH++YD+ TA++ G+ L T AF+++ S+P T + + L L Sbjct: 96 DDDVLRRGKPTVHVEYDDATALLVGDALQTLAFQVLASAPVTDMPTRQLGMIGL-LAMAS 154 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G +GM GGQ +D+ +D ++ + KTGAL+ + GA ERL Sbjct: 155 GSRGMAGGQAIDLAAVGRQLDLRELEFMHIHKTGALIRCSVLLGAQAGTVDGETLERLDR 214 Query: 213 FGENLGIIFQLADDLLDCEED 233 + + G++FQ+ DD+LD E D Sbjct: 215 YAKLTGLLFQVVDDILDAEAD 235 >gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A] gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A] Length = 309 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 85/229 (37%), Positives = 127/229 (55%), Gaps = 11/229 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L S L+E + ++ LD + T +++ A+RY+LL GGK++R L Sbjct: 19 LVSYLKEKKQLVEAALDASIPITCP-------EKIYEAMRYSLLAGGKRLRPILCLTTCE 71 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AL A+E IH SLIHDDLP+MDN RRG+ T H Y E AI+AG+ L Sbjct: 72 LMGGTVEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDAL 131 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 L+YAFE +++ + ++ L +G G++GGQ+LD++ E I + I Sbjct: 132 LSYAFEHVATQTHNVSLTNLVDVIARLGRTVGAAGLVGGQVLDLESEGKSNITSDILKFI 191 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ + SGAI+A A+ + ERL + +N+G+ FQ+ DD+LD Sbjct: 192 HVHKTGALLETSVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDDILD 240 >gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM 17244] gi|169259366|gb|EDS73332.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM 17244] Length = 294 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 122/207 (58%), Gaps = 9/207 (4%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + + Y+L +GGK+IR L+ E + AL + AA+E IH YSLIHDDLP MD+ Sbjct: 31 IFESFNYSLFVGGKRIRPILLMESCKCVGGDTNEALPLMAAMEMIHTYSLIHDDLPCMDD 90 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGL 156 +RRGKPT H Y E TA++AG+ LL A+E + KD N + M + + G+ Sbjct: 91 DELRRGKPTNHTVYGEATALLAGDSLLNLAYETMLKGAKSSKDINRYVEAMNVIADSAGV 150 Query: 157 QGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +GM+ GQ++D++ E + ET F I KTGA++ + SGA++ A+ +E + L + Sbjct: 151 KGMIAGQVMDMESEGKEPDGETLDF-IHDNKTGAILRASVISGAVVGGATDDELKNLSEY 209 Query: 214 GENLGIIFQLADDLLDC---EEDLPKK 237 +G++FQ+ DD+LD EE L KK Sbjct: 210 ARAIGLMFQVVDDILDVVSDEETLGKK 236 >gi|296101542|ref|YP_003611688.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056001|gb|ADF60739.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 299 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 88/208 (42%), Positives = 126/208 (60%), Gaps = 7/208 (3%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q N L+ A+ Y ALLGGK++R FLV ++F ++ T AA+ECIH YSLIHD Sbjct: 25 QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGNMFGISDTTLDAPAAAVECIHAYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149 DLP+MD+ +RRG+PT HI++ E AI+AG+ L T AF I+S +P ++ D R ++ Sbjct: 85 DLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMAEVSDRDRLAMVSE 144 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G+ GM GGQ LD++ E ++ Q+ I + KTGAL+ A GA+ A Q K Sbjct: 145 LAMASGVAGMCGGQALDLEAEGRQVNLEQLERIHRHKTGALIRAAVRLGALSA-GVQGRK 203 Query: 208 ER--LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPILDRYAESIGLAFQVQDDILDVVGD 231 >gi|168186200|ref|ZP_02620835.1| geranyltranstransferase [Clostridium botulinum C str. Eklund] gi|169295787|gb|EDS77920.1| geranyltranstransferase [Clostridium botulinum C str. Eklund] Length = 289 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 126/213 (59%), Gaps = 6/213 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 ++ L + ++N + A++Y++ +GGK+IR L+ S++ N+ + + AIE Sbjct: 11 NVWLNNYFENKGRYNKMVYDAMKYSVEVGGKRIRPILMLCTYSVYKDNYKEIMPMACAIE 70 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLL A I+ + L + Sbjct: 71 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIMFN--YSLNN 128 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGA 197 +I++ + ++ G++GM+GGQ++DI E I + + K KTG L+ + +GA Sbjct: 129 DIKALKASKIISEAAGVEGMIGGQVVDIISEGKKISIDNLRYMHKNKTGKLIKSSIIAGA 188 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I+ A + L FGE LG+ FQ+ DD+LD Sbjct: 189 ILGDAPNEDVNILDEFGEKLGLAFQIKDDILDV 221 >gi|328952416|ref|YP_004369750.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109] gi|328452740|gb|AEB08569.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109] Length = 296 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 86/201 (42%), Positives = 125/201 (62%), Gaps = 5/201 (2%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 R++ A+RY+LL GGK++R L A N + V A+E IH YSLIHDDLP+ Sbjct: 29 GQRVVEAMRYSLLAGGKRLRPILCLAAAEAVAGNVEQVMPVAGALEMIHTYSLIHDDLPA 88 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTH 152 MD+ RRG+PT H ++DE TAI+AG+GLLT AFE++++ T + ++ +++ ++ Sbjct: 89 MDDDDFRRGRPTCHKKFDEATAILAGDGLLTAAFEVLAAAATNHPAQASVYHEVVQTIAR 148 Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G QGM+GGQM D+ E T QV I ++KTGAL+ + SGA++ S + L Sbjct: 149 AAGYQGMVGGQMADLLAEGQPSTLEQVEAIHRLKTGALLTASVRSGALLGGGSARDILAL 208 Query: 211 RCFGENLGIIFQLADDLLDCE 231 +GE G+IFQ+ DDLLD E Sbjct: 209 THYGEKFGLIFQITDDLLDVE 229 >gi|224437990|ref|ZP_03658929.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818] gi|313144436|ref|ZP_07806629.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818] gi|313129467|gb|EFR47084.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818] Length = 289 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 84/226 (37%), Positives = 123/226 (54%), Gaps = 8/226 (3%) Query: 14 KRIDTILDDL---LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70 + I IL D LL A + + H + GGK+ R LV + + Sbjct: 2 QHITEILHDFESFLLAQAPQIPSFHQHYEKAVWEMVQNGGKRFRPALVFSVLNALAPQLV 61 Query: 71 -TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A +IECIH YSLIHDDLP MDN +RRG PT+H +Y E A++ G+GL TYAF Sbjct: 62 KNAFLPALSIECIHTYSLIHDDLPCMDNASLRRGHPTLHTKYGETLALLVGDGLNTYAFA 121 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGA 187 +++ + +L ++ L+ SL N G+ GM+ GQMLD +++ + Q+ I KT Sbjct: 122 LLA--QARLDSQLKLALIESLAINAGIGGMVLGQMLDCEFENQALALEQLQTIHTNKTAK 179 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ + E GAI+A+A ++ L FG LG+ FQL DD++D +D Sbjct: 180 LIATSLEFGAIIANADSKLRKALYDFGLKLGVYFQLRDDIIDICQD 225 >gi|54298220|ref|YP_124589.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris] gi|53752005|emb|CAH13431.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris] Length = 298 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 80/207 (38%), Positives = 122/207 (58%), Gaps = 24/207 (11%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ SA+ YAL GGK+IR LV L +V+ + AA+E HCYSLIHDDLP+MD Sbjct: 30 KIRSALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154 N +RRGKP+ H +DE TAI+ G+G+ A E++ T+L + + ++++T + Sbjct: 90 NDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVV---LTRLSPLLPAAQVVAITQVLVN 146 Query: 155 --GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALM--CFACESGAIMAHASQNE- 206 G+ GM+ GQ LD+ + + E Q+ I +KTG L+ CF M A+QNE Sbjct: 147 ASGISGMVSGQSLDLSELAKLSVTEEQLREIHLLKTGKLILACFE------MVLAAQNEV 200 Query: 207 ----KERLRCFGENLGIIFQLADDLLD 229 K L+ +G+++G++FQ+ DD LD Sbjct: 201 SEQIKSALKTYGKHIGLVFQMQDDYLD 227 >gi|90022863|ref|YP_528690.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40] gi|89952463|gb|ABD82478.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40] Length = 295 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 4/200 (2%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 +N L+ A+RY+LL GGK++R LV A A AIE IH YSLIHDDL Sbjct: 29 HYNTDLIEAMRYSLLLGGKRVRPVLVYAAAYATGGISAAADDCACAIEAIHTYSLIHDDL 88 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MD+ +RRG+PT HI Y E TAI+AG+ L AFE +++ + + + Q + +L Sbjct: 89 PAMDDDALRRGQPTCHIAYSEATAILAGDALQCQAFEWLANSQ-HMPASAALQAIAALAK 147 Query: 153 NIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G GM+ GQ +D+ D+ +D + + + KTGAL+ + E GAI A A+ + +L Sbjct: 148 ASGASGMVLGQAIDLAAVDKSVDLQHLETMHQHKTGALISASVEMGAIAAGATPTQTAQL 207 Query: 211 RCFGENLGIIFQLADDLLDC 230 R + +G+ FQ+ DD+LD Sbjct: 208 RQYASAIGLAFQVQDDILDV 227 >gi|323495108|ref|ZP_08100195.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio brasiliensis LMG 20546] gi|323310659|gb|EGA63836.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio brasiliensis LMG 20546] Length = 294 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 89/241 (36%), Positives = 132/241 (54%), Gaps = 20/241 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L S Q N++++D LQ+ H N L+ A+RY LL GGK+ R FLV Sbjct: 1 MQEALTSLQQRNNQQLDN-----WLQSLPH----QNLPLIEAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKLEDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176 G+ L T AF I++ + + +N R +++ L G GM GQ LD+ ++ + + Sbjct: 112 GDALQTLAFTILADGQLNPEAENYRIKMVKVLADASGANGMCMGQALDLAAENRNVSLQE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKER----LRCFGENLGIIFQLADDLLDCEE 232 + I + KTGALM A GA+ A+ + ER L + + +G+ FQ+ DD+LD Sbjct: 172 LEEIHRNKTGALMKSAIRLGAL---AAGEKGERVLPLLDQYADAIGLAFQVQDDILDIIS 228 Query: 233 D 233 D Sbjct: 229 D 229 >gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa NIES-843] gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa NIES-843] Length = 309 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 85/239 (35%), Positives = 131/239 (54%), Gaps = 14/239 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L S L+E +++ LD S + + ++ A+RY+LL GGK++R L Sbjct: 19 LASYLEEKRLIVESALD-------SSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCE 71 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + AL A+E IH SLIHDDLP+MDN RRGK T H + E AI+AG+GL Sbjct: 72 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 131 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 L YAFE +++ + +++ L +G G++GGQ+LD++ I + I Sbjct: 132 LAYAFEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFI 191 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 KTGAL+ + SGA++A A + +L + +N+G+ FQ+ DD+LD +E+L K Sbjct: 192 HTQKTGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGK 250 >gi|290580921|ref|YP_003485313.1| putative farnesyl diphosphate synthase [Streptococcus mutans NN2025] gi|254997820|dbj|BAH88421.1| putative farnesyl diphosphate synthase [Streptococcus mutans NN2025] Length = 289 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 121/205 (59%), Gaps = 6/205 (2%) Query: 30 HMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSL 87 + QT + L+ A+ Y++ GGK+IR L+ E F + A +V A++E IH SL Sbjct: 16 YAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAHYQVAASLEMIHTGSL 75 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDDLP+MDN RRG+ T H ++ E TAI+AG+ L F +++ K L+ +I+ +L+ Sbjct: 76 VHDDLPAMDNDDYRRGQLTNHKKFGETTAILAGDSLFLDPFGLLA--KADLRADIKIKLV 133 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 L+ G GM+GGQMLDI+ E + + Q+ I KTG L+ F + I+A S+ Sbjct: 134 AELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLTFPFVAAGIIAELSEK 193 Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230 RLR GE +G+ FQ+ DD+LD Sbjct: 194 ALARLRQVGELVGLAFQVRDDILDV 218 >gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 297 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 3/198 (1%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + +R+ A+RY+LL GGK++R L L AL A+E IH SLIHDDLP Sbjct: 31 YPERIYEAMRYSLLAGGKRLRPILCLAACELAGGTVEQALPTACALEMIHTMSLIHDDLP 90 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRGKPT H + E AI+AG+ LL +AFE I+S + + Q++ + H Sbjct: 91 AMDNDDFRRGKPTNHKVFGEDIAILAGDALLAFAFEHIASQTQGVPPQLVLQVIARIGHA 150 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + G++GGQ++D++ E I + I KTGAL+ + SG I+A + L Sbjct: 151 VAATGLVGGQVVDLESEGKAISLETLEYIHSHKTGALLEVSVVSGGILAGGDEELLAHLS 210 Query: 212 CFGENLGIIFQLADDLLD 229 + ++G+ FQ+ DD+LD Sbjct: 211 RYARDIGLAFQIVDDILD 228 >gi|166030417|ref|ZP_02233246.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC 27755] gi|166029775|gb|EDR48532.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC 27755] Length = 300 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 122/211 (57%), Gaps = 5/211 (2%) Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 LQ Q + ++ A+ Y+LL GGK++R L+ E +LF + AAIE +H Sbjct: 22 LQNYLPKQKGYQKIIMEAMGYSLLAGGKRLRPMLMKETYTLFGGHSKVIEPFMAAIEMVH 81 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNI 142 YSL+HDDLP+MDN RRG+ T H+ Y E AI+AG+ LL YAFE + + + +D++ Sbjct: 82 TYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMAILAGDALLNYAFETAVKAFVLEPEDSM 141 Query: 143 R-SQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM 199 + L G+ GMLGGQ++D+++ + + + I ++KTGAL+ A GAI+ Sbjct: 142 TIGNAIRVLGEKAGIYGMLGGQVIDVKETGHAVSKDVLDTIYELKTGALIEAAMMIGAIL 201 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ASQ E + + +G+ FQ+ DD+LD Sbjct: 202 GGASQEEVKTVERIASLVGLAFQVQDDILDV 232 >gi|330006916|ref|ZP_08305788.1| polyprenyl synthetase [Klebsiella sp. MS 92-3] gi|328535670|gb|EGF62119.1| polyprenyl synthetase [Klebsiella sp. MS 92-3] Length = 299 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 13/211 (6%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q N L+ A+ Y ALLGGK++R FLV +F V T AA+ECIH YSL+HD Sbjct: 25 QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGEMFGVCRTTLDAPAAAVECIHAYSLMHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149 DLP+MD+ +RRG PT HI++ E AI+AG+ L T AF I+S +P + D R ++ Sbjct: 85 DLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFSILSDAPMVDVPDRDRLAMVSE 144 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G+ GM GGQ LD+Q E +D + I + KTGAL+ A GA+ S E+ Sbjct: 145 LAQASGVAGMCGGQALDLQAEGQQVDLQALERIHRHKTGALIRAAVRLGAL----SAGER 200 Query: 208 ER-----LRCFGENLGIIFQLADDLLDCEED 233 R L + EN+G+ FQ+ DD+LD D Sbjct: 201 GRAALPALDRYAENIGLAFQVQDDILDVVGD 231 >gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 296 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 85/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229 >gi|227530530|ref|ZP_03960579.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540] gi|227349536|gb|EEJ39827.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540] Length = 290 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 74/196 (37%), Positives = 111/196 (56%), Gaps = 6/196 (3%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMD 96 L S++ Y++ GGK++R L +F + ++ AIE +H YSLIHDDLP+MD Sbjct: 28 LASSMEYSVNAGGKRLRPALTLTTVQIFGGQLNQNVMKASTAIELLHTYSLIHDDLPAMD 87 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H ++ A +AG+GLLT AF+ ++ QL +++L L+L G Sbjct: 88 NDDLRRGKPTNHKKFGAGMATLAGDGLLTMAFQWLTD--NQLPTETQAELTLALAKAAGP 145 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+ GQ DI+ E + T Q+ + + KTG L+ +A +G I+ K L FG Sbjct: 146 AGMVAGQARDIEGEHQNLTLEQLRYLHRQKTGDLLSYAVLAGGIITKQDSTTKNLLADFG 205 Query: 215 ENLGIIFQLADDLLDC 230 G+ FQ+ DDL+D Sbjct: 206 AQFGLAFQIYDDLMDV 221 >gi|27363789|ref|NP_759317.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] gi|27359906|gb|AAO08844.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] Length = 298 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 86/238 (36%), Positives = 127/238 (53%), Gaps = 22/238 (9%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L S Q N+++++ LD L N L+ A+RY L LGGK+ R FLV Sbjct: 9 LASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVYATGE 59 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + +AIECIH YSLIHDDLP+MD+ +RRG+PT H+++DE TAI+ G+ L Sbjct: 60 MLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILTGDAL 119 Query: 124 LTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180 T AF I++ + R ++ +L G QGM GQ LD+ ++ + ++ I Sbjct: 120 QTLAFTILAEGTLSADGETQRVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEELEEI 179 Query: 181 QKMKTGALMCFACESGAIMAHASQNEK-----ERLRCFGENLGIIFQLADDLLDCEED 233 + KTGAL+ A GA+ A EK +L + +G+ FQ+ DD+LD D Sbjct: 180 HRNKTGALIRCAVRLGALAA----GEKGLAILPQLEKYSTAIGLAFQVQDDILDIISD 233 >gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134] gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842] gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222] gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407] gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185] gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2] gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W] gi|74489206|gb|EAO52676.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134] gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842] gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W] gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2] gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185] gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407] gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222] gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis CT-43] Length = 296 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 85/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229 >gi|253583347|ref|ZP_04860545.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725] gi|251833919|gb|EES62482.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725] Length = 295 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 3/206 (1%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + + + + ++YA+L GGK++R L+ + + + + AAIE IH YSL+HD Sbjct: 24 ELNYPEVIAEGMKYAVLNGGKRLRPILLFMVLDILDCDKEKGIASAAAIEMIHSYSLVHD 83 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP++DN RRGK T H ++ E I+ G+ LLT+AF I++ L +++ Sbjct: 84 DLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFYILTEKNKHLPAEKIVEIVRLT 143 Query: 151 THNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + G+ GM+GGQM+DI E ID + + KTG LM E I+ A + E+E Sbjct: 144 SSYAGINGMIGGQMVDIASEGKKIDLETLKYMHSNKTGKLMKLPVELACIIGDADREERE 203 Query: 209 RLRCFGENLGIIFQLADDLLDCEEDL 234 L F E +G+ FQ+ DD+LD E D Sbjct: 204 VLVKFSELIGLAFQIKDDILDIEGDF 229 >gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797] gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797] Length = 298 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 119/202 (58%), Gaps = 6/202 (2%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +A+ Y+L GGK++R LV + TAL AIE +H YSLIHDDLP+MD+ Sbjct: 37 LKAAMSYSLSAGGKRLRPILVLLSCEACGGDQSTALPAACAIEMVHTYSLIHDDLPAMDD 96 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG PT HI++ E AI+AG+ LLT AFE++++ + ++K + + + L + G Sbjct: 97 DELRRGLPTSHIKFGEANAILAGDALLTRAFELLAN-QIEVK-SCAAACCVDLANAAGAV 154 Query: 158 GMLGGQMLDIQDEFIDETQVFM---IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ+ D++ E ++ + + I K KTG L+C A GA + A + L +G Sbjct: 155 GMVGGQVADLESEHLENPTLEILEAIHKRKTGRLICSALTMGARIGGADPATLKNLERYG 214 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 +G+ FQ+ DDLLD D K Sbjct: 215 TCIGLAFQITDDLLDLTGDEEK 236 >gi|59711319|ref|YP_204095.1| geranyltranstransferase [Vibrio fischeri ES114] gi|59479420|gb|AAW85207.1| geranyltranstransferase [Vibrio fischeri ES114] Length = 301 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 119/202 (58%), Gaps = 9/202 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A++Y+LL GGK+ R +LV A + + A AAIEC+H YSLIHDDLP+MDN Sbjct: 37 LTEAMKYSLLLGGKRARPYLVYITAQMLGIKAEFADSAAAAIECVHSYSLIHDDLPAMDN 96 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI---RSQLMLSLTHNI 154 +RRG T HI+YDE TAI+AG+ L T AFEI+++ QL D+ R ++ L+ Sbjct: 97 DDLRRGHATCHIKYDEATAILAGDALQTLAFEILAN--GQLSDDAETSRIDMIRVLSKAS 154 Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLR 211 G GM GQ LD+Q E +D + I KTGAL+ A + GA+ A + +L Sbjct: 155 GASGMCMGQSLDLQAEGKKVDLASLERIHANKTGALIKCAVQLGALCAGDKGKAILPQLE 214 Query: 212 CFGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD D Sbjct: 215 IYADAIGLAFQVQDDILDIISD 236 >gi|189485328|ref|YP_001956269.1| geranyltranstransferase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287287|dbj|BAG13808.1| geranyltranstransferase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 297 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 118/209 (56%), Gaps = 11/209 (5%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + N + +RY++L GGK++R LV A LF V + AIE +H YSLIHDDL Sbjct: 27 KDNSVVSQGMRYSVLAGGKRLRPVLVILAAELFGVKAENVIPAACAIEYLHTYSLIHDDL 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN +RRG H ++ E AI+ G+ LLT +F +I+ K+ K NI + + L + Sbjct: 87 PAMDNDDLRRGISANHKKFGEAAAILCGDALLTESFSLITKSKSSEK-NINEAVRI-LAY 144 Query: 153 NIGLQGMLGGQMLDI--------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 G +GM+ GQ DI +++ + ++ IQ KT ALM + + GA++A A + Sbjct: 145 YGGYKGMIAGQTEDILETGKWSKKNKILLGEKIKFIQIQKTAALMIASLKIGAVLAGADK 204 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + L +G+N GI FQ+ DD+LD D Sbjct: 205 EGLKALEVYGKNAGIAFQIVDDILDVYAD 233 >gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 291 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 +D L A+ Y+L+ GGK++R L+ A + L V A+E IH YSLIHDDLP+ Sbjct: 27 DDTLRQAMAYSLMAGGKRLRPVLLMAAADAVGGDGAKFLSVACALEMIHTYSLIHDDLPA 86 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGK T H + + AI+AG+GLLT AF +I + D + +++ ++ Sbjct: 87 MDNDDYRRGKLTNHKVFGDGIAILAGDGLLTLAFTVILRQQDVSADTL-LRVVDEISRAA 145 Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G +GM+GGQ+LD++ E I ++ + KTGAL A SGAI+ AS+ + L Sbjct: 146 GAEGMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAALRSGAILGGASEAQLASLTT 205 Query: 213 FGENLGIIFQLADDLLDC---EEDLPK 236 + E G+ FQ+ DD+LD ED+ K Sbjct: 206 YAEQFGLAFQITDDILDVVGTAEDIGK 232 >gi|145629449|ref|ZP_01785247.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 22.1-21] gi|144978292|gb|EDJ88056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 22.1-21] Length = 296 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 95/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ S+ N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESY-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L ++AFEI++ +P + + L+ L G+QGM GQ LD+ E I +++ Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 +I + KTGAL+ A + G I + H + E+ L + E +G+ FQ+ DD+LD E D Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis] Length = 387 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 10/211 (4%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + ++ ++RY+LL GGK++R L L A+ A+E IH SLIHDDLP Sbjct: 118 YPQKIHESMRYSLLAGGKRVRPVLCIAACELVGGREELAMPTACAMEMIHTMSLIHDDLP 177 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSLT 151 MDN +RRGKPT H + + TA++AG+ L +AFE + + K+ D I + + L Sbjct: 178 CMDNDDLRRGKPTNHKVFGQDTALLAGDALHAFAFEHIVAFTSKSVGSDGIL-RAVTELA 236 Query: 152 HNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G QG++GGQ++DI +D F+D + I KT L A GAI+ AS +E E Sbjct: 237 RATGPQGIMGGQIVDIASERDAFVDLQTLEWIHIHKTAVLFECATVCGAIIGGASGDEIE 296 Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLPK 236 R+R F LG++FQ+ DD+LD EDL K Sbjct: 297 RIRRFARYLGLLFQVVDDILDVTKSSEDLGK 327 >gi|240145667|ref|ZP_04744268.1| geranyltranstransferase [Roseburia intestinalis L1-82] gi|257202256|gb|EEV00541.1| geranyltranstransferase [Roseburia intestinalis L1-82] Length = 296 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 117/201 (58%), Gaps = 5/201 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + ++ A+ Y+ L GGK++R L+ E LF AAIE IH YSL+HDDLP Sbjct: 28 YQKTVIEAMNYSFLAGGKRLRPILMLETYRLFGGKSKVIEPFMAAIEMIHTYSLVHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTH 152 +MDN RRGK T H+ Y E AI+AG+ LLTYAFE + + ++ + + L+ Sbjct: 88 AMDNDEYRRGKKTTHVVYGEAMAILAGDALLTYAFETAAKALDIEPQNPGIGKAIRILSA 147 Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G+ GM+GGQ +D++ E + + ++ I ++KT AL+ + GA++A A+ +E++ Sbjct: 148 KAGIYGMVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKI 207 Query: 210 LRCFGENLGIIFQLADDLLDC 230 + +G+ FQ+ DD+LD Sbjct: 208 VEAVASKVGLAFQIQDDILDV 228 >gi|238022838|ref|ZP_04603264.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147] gi|237866041|gb|EEP67177.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147] Length = 295 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 120/221 (54%), Gaps = 10/221 (4%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75 + +L +L +TA Q H A+RYA L GGK++R LV A L N Sbjct: 16 EAVLQQMLPETALAPQGLHE-----AMRYAALDGGKRLRPMLVLAAAELGNRVQAACEAA 70 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+ECIH YSL+HDD+P MDN +RRGKPT H+ Y TA++ G+ L T AFE++S + Sbjct: 71 LAAVECIHVYSLVHDDMPEMDNDTLRRGKPTCHVAYGAATALLVGDALQTLAFELLSR-Q 129 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFAC 193 T L + +++ L G GM GGQ +D+ + D Q + Q +KTGAL+ A Sbjct: 130 TDLPAARQLRMLNVLARASGSTGMAGGQAIDLANVGHDLPQDALEQMHSLKTGALIRAAV 189 Query: 194 ESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ + L + LG+ FQ+ DD+LDC D Sbjct: 190 QLGALSCPDVDEAALAALDEYAAKLGLAFQVIDDVLDCAAD 230 >gi|152995175|ref|YP_001340010.1| polyprenyl synthetase [Marinomonas sp. MWYL1] gi|150836099|gb|ABR70075.1| Polyprenyl synthetase [Marinomonas sp. MWYL1] Length = 293 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 97/231 (41%), Positives = 138/231 (59%), Gaps = 17/231 (7%) Query: 10 QENSKRIDTILDDLLLQ--TASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 Q +R+D L L Q A+H+Q +A+ Y+L GGK++R L ASLF Sbjct: 8 QYARRRVDDYLTLNLGQYEPATHLQ--------NAMAYSLFNGGKRVRPMLTYAAASLFG 59 Query: 67 -VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 N+LT AAIE IH YSLIHDDLP+MD+ +RRGKPT HIQYDE TAI+AG+ L T Sbjct: 60 EANNLTDASA-AAIESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQYDEATAILAGDALQT 118 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKM 183 +AFE++S+PK Q ++ QL+ L H G GM+ GQM+D+ + I+ ++ + + Sbjct: 119 FAFELLSNPKHQ-STKVQLQLIQELVHASGRHGMVTGQMIDLANVGNSINIDELEQMHQH 177 Query: 184 KTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ + GAI A S+ + L + +G+ FQ+ DD++D D Sbjct: 178 KTGALIRASIRMGAISTGAKSEADFAALDAYAAAIGLAFQVQDDIIDITSD 228 >gi|291538771|emb|CBL11882.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis XB6B4] Length = 296 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 117/201 (58%), Gaps = 5/201 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + ++ A+ Y+ L GGK++R L+ E LF AAIE IH YSL+HDDLP Sbjct: 28 YQKTVIEAMNYSFLAGGKRLRPILMLETYRLFGGRSKVIEPFMAAIEMIHTYSLVHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTH 152 +MDN RRGK T H+ Y E AI+AG+ LLTYAFE + + ++ + + L+ Sbjct: 88 AMDNDEYRRGKKTTHVVYGEAMAILAGDALLTYAFETAAKALDIEPQNPGIGKAIRILSA 147 Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G+ GM+GGQ +D++ E + + ++ I ++KT AL+ + GA++A A+ +E++ Sbjct: 148 KAGIYGMVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKI 207 Query: 210 LRCFGENLGIIFQLADDLLDC 230 + +G+ FQ+ DD+LD Sbjct: 208 VEAVASKVGLAFQIQDDILDV 228 >gi|311069029|ref|YP_003973952.1| geranyltranstransferase [Bacillus atrophaeus 1942] gi|310869546|gb|ADP33021.1| geranyltranstransferase [Bacillus atrophaeus 1942] Length = 296 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 125/199 (62%), Gaps = 4/199 (2%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L ++ Y+L GGK++R +V + + + VG A+E IH YSLIHDDLP M Sbjct: 31 DSLKKSMLYSLEAGGKRLRPVVVLAILHAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCM 90 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNI 154 D+ +RRGKPT H + E TA++AG+GLLT +F++I+S ++ + + R +L+ L Sbjct: 91 DDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSEDVSADKRLRLVNELISAA 150 Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G +GM+GGQ+ D++ E + ++ I + KT L+ F+ +GAI+A A +NE E LR Sbjct: 151 GTEGMVGGQIADMEAESKSVSLEELESIHERKTAKLLAFSVMAGAILADAPENEIETLRA 210 Query: 213 FGENLGIIFQLADDLLDCE 231 F ++GI FQ+ DD+LD E Sbjct: 211 FSSHIGIGFQIRDDILDLE 229 >gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102] gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102] Length = 310 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 83/230 (36%), Positives = 126/230 (54%), Gaps = 12/230 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L+E K D LD + + +++ A+RY+LL GGK++R L Sbjct: 19 LVAYLKERQKLCDNALD-------RAIPIIYPEKIYEAMRYSLLAGGKRVRPILCLATCE 71 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+GL Sbjct: 72 MMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGL 131 Query: 124 LTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179 L AFE+++ + + Q+++ L +G G++GGQ++D++ E I + Sbjct: 132 LALAFELVALKTPANVNRELTLQVIVRLGRALGAAGLVGGQVVDLECEGKSDISLETLNF 191 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I + KT AL+ SG I+A AS + +RL + EN+G+ FQ+ DD+LD Sbjct: 192 IHRHKTSALLEACVVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILD 241 >gi|300722008|ref|YP_003711288.1| geranyltranstransferase [Xenorhabdus nematophila ATCC 19061] gi|297628505|emb|CBJ89072.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Xenorhabdus nematophila ATCC 19061] Length = 315 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 79/193 (40%), Positives = 112/193 (58%), Gaps = 12/193 (6%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 A+LGGK++R FLV +F ++ + A+ECIH YSLIHDDLP+MDN +RRG+P Sbjct: 56 AVLGGKRLRPFLVYSVGEMFGLSRKSLDAAALALECIHAYSLIHDDLPAMDNDDLRRGQP 115 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 T HI++ E AI+AG+ L + AFE+++ P L D R ++ L G GM GG Sbjct: 116 TCHIKFGESQAILAGDALQSLAFELLAHYDMPDVALSD--RLAMVAELASASGFAGMCGG 173 Query: 163 QMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER---LRCFGENL 217 Q LD++ E ID + I + KTGAL+ A GA A Q +E L + + + Sbjct: 174 QSLDLEAEGKQIDLASLEQIHRHKTGALIRAAARLGAY--SAGQRGREVIPLLDQYTQAI 231 Query: 218 GIIFQLADDLLDC 230 G+ FQ+ DD+LD Sbjct: 232 GLAFQVHDDILDV 244 >gi|331269445|ref|YP_004395937.1| polyprenyl synthetase [Clostridium botulinum BKT015925] gi|329125995|gb|AEB75940.1| Polyprenyl synthetase [Clostridium botulinum BKT015925] Length = 289 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 118/206 (57%), Gaps = 12/206 (5%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + +N L +++Y++ +GGK+IR L+ S++ N+ + + AIE IH YSLIHD Sbjct: 21 KGSYNKVLYDSMKYSIEVGGKRIRPILMLSTYSIYKDNYKDIMPMACAIEMIHTYSLIHD 80 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP MDN +RRGKPT H + E AI+AG+GLL A ++ + + D + + Sbjct: 81 DLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNVMFNY-SLTHDKVALMASKVI 139 Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQ 204 + G +GM+GGQ++DI I E Q I K+ KTG L+ + +GAI+ AS+ Sbjct: 140 SEAAGAEGMIGGQVVDI----ISEGQKISIDKLKYMHKNKTGQLIKSSIIAGAILGGASK 195 Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230 E L FG LG+ FQ+ DD+LD Sbjct: 196 ENLEILDEFGSKLGLAFQIKDDILDV 221 >gi|188990958|ref|YP_001902968.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str. B100] gi|167732718|emb|CAP50912.1| geranyltranstransferase [Xanthomonas campestris pv. campestris] Length = 291 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 117/199 (58%), Gaps = 9/199 (4%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+R+A+LGG K++R LV +LF + A+E IH YSL+HDDLP+MD Sbjct: 30 RLHAAMRHAVLGGGKRMRPLLVYASGALFGAEEGSLDAPAVAVELIHAYSLVHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PTVHI +DE TAI+AG+ L AFE+++ +R + SL G Sbjct: 90 DDALRRGRPTVHIAFDEATAILAGDALQARAFELLAEAPADAA--LRVGWLQSLASAAGA 147 Query: 157 QGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM GGQ LDI Q + +D Q + +KTGAL+ A G + A +++RL Sbjct: 148 AGMCGGQALDIDATGQVQALDALQ--RMHALKTGALIRAAVRMGVLTGGAGIADQQRLDA 205 Query: 213 FGENLGIIFQLADDLLDCE 231 F + LG+ FQ+ DD+LD E Sbjct: 206 FADALGLAFQVRDDILDVE 224 >gi|295096799|emb|CBK85889.1| farnesyl-diphosphate synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 299 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 13/211 (6%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q N L+ A+ Y ALLGGK++R FLV ++F ++ T AA+ECIH YSLIHD Sbjct: 25 QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGNMFGISDNTLDAPAAAVECIHAYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149 DLP+MD+ +RRG+PT HI++ E AI+AG+ L T AF I+S +P ++ D R ++ Sbjct: 85 DLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMVEVSDRDRLAMVSE 144 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G+ GM GGQ LD++ E T Q+ I + KTGAL+ A GA+ S E+ Sbjct: 145 LAMASGVAGMCGGQALDLEAEGRQVTLEQLERIHRHKTGALIRAAVRLGAL----SAGER 200 Query: 208 ER-----LRCFGENLGIIFQLADDLLDCEED 233 R L + E++G+ FQ+ DD+LD D Sbjct: 201 GRKALPILDRYAESIGLAFQVQDDILDVVGD 231 >gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1] gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160 [Aromatoleum aromaticum EbN1] Length = 298 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 4/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+LGG K+IR LV L +V A+E IH YSL+HDDLP MD Sbjct: 34 RLHEAMRYAVLGGGKRIRPLLVHAAGGLVGAAPERLDKVACAVELIHAYSLVHDDLPCMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPTVH++YD+ TA++ G+ L AF+ +S + + ++ L G Sbjct: 94 NDVLRRGKPTVHVEYDDATALLVGDSLQALAFQSLSEHPLTEDPSEQLSMITQLARASGS 153 Query: 157 QGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCF 213 +GM GGQ +D+ + + ++ + KTGAL+ + GA A + ERL + Sbjct: 154 RGMAGGQAIDLAAVGKQLSREELEYMHIHKTGALIRASVLLGAACGARLDSDRLERLDHY 213 Query: 214 GENLGIIFQLADDLLDCEED 233 G+ +G++FQ+ DD+LD + D Sbjct: 214 GKLVGLLFQVVDDILDTQSD 233 >gi|323498628|ref|ZP_08103620.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio sinaloensis DSM 21326] gi|323316326|gb|EGA69345.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio sinaloensis DSM 21326] Length = 294 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 91/241 (37%), Positives = 130/241 (53%), Gaps = 20/241 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L S Q N+ +++ L+ T H Q L+ A+RY LL GGK+ R FLV Sbjct: 1 MQEALTSLQQRNNAQLEAWLN-----TLPHQQQP----LIEAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCTLEELDTPAAAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175 G+ L T AF I++ +P Q + R +++ +L G GM GQ LD+ E D + Sbjct: 112 GDALQTLAFTILADGHLNPDAQAQ---RIKMVKALAEASGAAGMCMGQALDLAAENRDVS 168 Query: 176 --QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232 ++ I + KTGALM A GA+ A + E L + + +G+ FQ+ DD+LD Sbjct: 169 LQELEEIHRNKTGALMKCAIRLGAMAAGSKGVEVLPLLDKYADAIGLAFQVQDDILDIIS 228 Query: 233 D 233 D Sbjct: 229 D 229 >gi|239582554|dbj|BAB61886.2| farnesyl diphosphate synthase [Rhodopseudomonas palustris] Length = 147 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 67/147 (45%), Positives = 94/147 (63%), Gaps = 4/147 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP MDN +RRG+PT+H YD+ TAI+AG+ LLT+AF+I++ + +R L Sbjct: 1 HDDLPGMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHKDPTVRLLLTR 60 Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQ 204 L GL GM+GGQMLD+ E F D V +Q+MKTGAL+ + C +GAI+ A+ Sbjct: 61 VLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQANA 120 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231 ++ L +G LG FQ+ADD+LB E Sbjct: 121 DQYRALDDYGRALGEAFQIADDILBVE 147 >gi|225848385|ref|YP_002728548.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Sulfurihydrogenibium azorense Az-Fu1] gi|225643069|gb|ACN98119.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Sulfurihydrogenibium azorense Az-Fu1] Length = 288 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 91/235 (38%), Positives = 140/235 (59%), Gaps = 17/235 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN- 66 L++ ++ I+T L +L+ + L A+ Y+L +GGK+IR L+ E + N Sbjct: 8 LKQKAELINTYLKNLIPKGTPK-------ELFDAMEYSLTVGGKRIRPILIIESSKAVNP 60 Query: 67 -VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V+ + V ++E IH YSLIHDDLP+MD+ +RRGKPT H + E AI+AG+GLLT Sbjct: 61 DVDIEDFIDVALSVEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAGDGLLT 120 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 YAFE+IS + D + +++ +++++G+ GM+GGQ DI + F D + I KT Sbjct: 121 YAFELISGNQKITPDKLL-KVINVISNSVGVYGMVGGQAGDILENFKD---IDFIHTHKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPKK 237 + C+ G I+A AS+ E E L+ +G +GI FQ+ DD+LD EE + KK Sbjct: 177 AKFISGCCQVGGILAGASKKEIENLKNYGLYIGIAFQIWDDILDEIGDEEKVGKK 231 >gi|291287805|ref|YP_003504621.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290884965|gb|ADD68665.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 299 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 81/198 (40%), Positives = 120/198 (60%), Gaps = 9/198 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+RY+L GGK++R LV +F A AA+E +H YSLIHDDLP+MD+ Sbjct: 35 LVDAMRYSLFAGGKRLRPALVFSSYGVFEGYFDKATPFAAAVEMLHTYSLIHDDLPAMDD 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--- 154 RRGKPT H Y E TAI+AG+GLLT AFE++ + ++ ++ ML + + Sbjct: 95 DDYRRGKPTNHKMYGEATAILAGDGLLTKAFEVMCN--AEINPDVEPAQMLEAAYKLADA 152 Query: 155 -GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G +GM+GGQ D+ +D + V I KT L+ + CE GAI+ S+++K+R+R Sbjct: 153 AGDRGMVGGQFTDMEAEDGVFNSATVDFIHMNKTSRLISYCCELGAILGFGSEDDKKRMR 212 Query: 212 CFGENLGIIFQLADDLLD 229 +G +G+ FQ+ DD+LD Sbjct: 213 EYGIRIGLAFQIVDDILD 230 >gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876] gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876] Length = 296 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 85/224 (37%), Positives = 134/224 (59%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCPSVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229 >gi|145636150|ref|ZP_01791820.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittHH] gi|145270672|gb|EDK10605.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittHH] Length = 296 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 95/237 (40%), Positives = 135/237 (56%), Gaps = 13/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ S N LL A++YALL GGK++R FLV Sbjct: 2 GNFSEELQQVQTRINRFLEAQFEGIESR-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L ++AFEI++ +P + + L+ L G+QGM GQ LD+ E I +++ Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 +I + KTGAL+ A + G I + H + E+ L + E +G+ FQ+ DD+LD E D Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231 >gi|13431547|sp|Q43133|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; Flags: Precursor gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba] Length = 366 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 78/196 (39%), Positives = 110/196 (56%), Gaps = 7/196 (3%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L A+ A+E IH SLIHDDLP MDN + Sbjct: 102 AMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDL 161 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGM 159 RRGKPT H Y E A++AG+ LL++AFE ++S + R + + L IG +G+ Sbjct: 162 RRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGL 221 Query: 160 LGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ++DI E +D V + I KT AL+ + G I+ S E ERLR F Sbjct: 222 VAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFA 281 Query: 215 ENLGIIFQLADDLLDC 230 +G++FQ+ DD+LD Sbjct: 282 RCIGLLFQVVDDILDV 297 >gi|325917351|ref|ZP_08179568.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325536438|gb|EGD08217.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937] Length = 287 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 82/198 (41%), Positives = 119/198 (60%), Gaps = 7/198 (3%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+R+A+LGG K++R LV +LF ++E IH YSL+HDDLP+MD Sbjct: 26 RLHAAMRHAVLGGGKRMRPLLVYASGALFRAAEDLLDTPAVSVELIHAYSLVHDDLPAMD 85 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PTVHI +DE TAI+AG+ L T AFE+++S + +R + L G Sbjct: 86 DDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAS--APVSAELRVGWLQHLASAAGA 143 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCF 213 GM GGQ LDI D + +Q+M KTGAL+ A GA+ A+ +++R+ F Sbjct: 144 GGMCGGQALDI-DATGQVQSLHALQRMHALKTGALIRAAVRMGALSGRAAPADQQRVDDF 202 Query: 214 GENLGIIFQLADDLLDCE 231 + LG+ FQ+ DD+LD E Sbjct: 203 ADALGLAFQVRDDILDVE 220 >gi|52080961|ref|YP_079752.1| polyprenyl synthetase,polyprenyl synthetase [Bacillus licheniformis ATCC 14580] gi|52786337|ref|YP_092166.1| YqiD [Bacillus licheniformis ATCC 14580] gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2] gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis ATCC 14580] gi|52348839|gb|AAU41473.1| YqiD [Bacillus licheniformis ATCC 14580] gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2] Length = 296 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 83/188 (44%), Positives = 118/188 (62%), Gaps = 7/188 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H Sbjct: 44 GGKRLRPILVLALLHAYGKDEEAGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 Y E TAI+AG+ LLT +F++I+S + + R +L+ L G +GM+GGQ+LD+ Sbjct: 104 KIYGEATAILAGDALLTESFKMITSNMPSDVSAEKRIRLVNELISAAGAEGMVGGQILDM 163 Query: 168 QDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + E +DE Q I + KT L+ F+ +GAI+A AS+ E E+LR F ++GI FQ+ Sbjct: 164 EAESKSVSLDELQ--RIHEGKTAKLLSFSVIAGAILADASEKEIEKLREFSHHIGIGFQI 221 Query: 224 ADDLLDCE 231 DD+LD E Sbjct: 222 RDDILDLE 229 >gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp. lyrata] gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp. lyrata] Length = 372 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 8/194 (4%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R L L A++ A+E IH SLI DDLP MDN + Sbjct: 111 AMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDL 170 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H + E AI++G LL AFE ++ K +R ++ L +IG +G++ Sbjct: 171 RRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVR--VVKELAKSIGTKGLV 228 Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GQ +D+ E +D V + I KTGAL+ + GA++ S+ E E++R F Sbjct: 229 AGQAMDLSSEGLDPNDVGLEDLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRYFAR 288 Query: 216 NLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 289 CIGLLFQVVDDILD 302 >gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii] gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii] Length = 366 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 82/230 (35%), Positives = 126/230 (54%), Gaps = 12/230 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L S LQ ++ LD+ L ++ D++ A+RY+LL GGK++R L + Sbjct: 74 LQSYLQFKGVAVNAALDEAL-------PMRYPDKIHEAMRYSLLAGGKRVRPILCIAASE 126 Query: 64 LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TA++AG+ Sbjct: 127 MIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDA 186 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFM 179 +L+ AFE I+ + +++ L +G QG++ GQ++DI E +D + Sbjct: 187 MLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDTLRY 246 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I KTG L+ A GAI AS+ E R+R + + +G++FQ+ DD+LD Sbjct: 247 IHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILD 296 >gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum ATCC 824] gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum ATCC 824] gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum EA 2018] Length = 289 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 124/202 (61%), Gaps = 6/202 (2%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + +N R+ ++ Y+L GGK++R L+ +++N ++ + + AAIE IH YSLIHD Sbjct: 21 KDNYNKRVYESMNYSLNAGGKRVRPLLLLASYAIYNKDYKEVIDIAAAIEMIHTYSLIHD 80 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLS 149 DLP MDN +RRG+PT H + A++AG+GLL A I+ + ++ +++ LM+S Sbjct: 81 DLPCMDNDDLRRGRPTNHKIFGYSIALLAGDGLLNEAMNIMFKYCIGKGEEALKACLMIS 140 Query: 150 LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 + GM+GGQ++DI E I+E ++ + K KTG L+ A SGAI+ A ++ Sbjct: 141 KAASS--DGMIGGQVVDILSEGKKINEDELRYMHKKKTGELIKAAVVSGAILGGAPLHDV 198 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 E L +G+ LG+ FQ+ DD+LD Sbjct: 199 ELLSQYGDKLGLAFQIEDDILD 220 >gi|332307431|ref|YP_004435282.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174760|gb|AEE24014.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 296 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 89/225 (39%), Positives = 131/225 (58%), Gaps = 6/225 (2%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 KR+ +D LL S + +H RL A++YALL GGK++R FLV V+ Sbjct: 8 KRVHQRVDALLQAQISDLD-EHAPRLKKAMQYALLMGGKRMRPFLVYAVGEALGVSESDL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-I 131 AIECIH YSL+HDDLP+MD+ +RRG PT HIQ+DE AI+AG+ L T AF+I + Sbjct: 67 DAPALAIECIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTLAFDIVV 126 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALM 189 + P + + R +L+ L+ G GM GGQ +D+Q + I + Q+ + KTGAL+ Sbjct: 127 NYPLSDFANQQRIELVRILSRASGYDGMCGGQGIDLQSTNTLISQRQLEQLHSKKTGALI 186 Query: 190 CFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 A + A ++ + +E K L + + +G+ FQ+ DD+LD D Sbjct: 187 IAAVKMAATLSTSVSDESKALLSQYAKTIGLAFQVQDDILDVVGD 231 >gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii] gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii] Length = 327 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 82/230 (35%), Positives = 126/230 (54%), Gaps = 12/230 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L S LQ ++ LD+ L ++ D++ A+RY+LL GGK++R L + Sbjct: 35 LQSYLQFKGVAVNAALDEAL-------PMRYPDKIHEAMRYSLLAGGKRVRPILCIAASE 87 Query: 64 LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TA++AG+ Sbjct: 88 MIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDA 147 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFM 179 +L+ AFE I+ + +++ L +G QG++ GQ++DI E +D + Sbjct: 148 MLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDMLRY 207 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I KTG L+ A GAI AS+ E R+R + + +G++FQ+ DD+LD Sbjct: 208 IHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILD 257 >gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis] Length = 382 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 115/197 (58%), Gaps = 5/197 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L ++RY++L GGK++R L L A+ + AIE IH +L+HDD+P +D Sbjct: 116 KLHESMRYSILSGGKRVRPVLCIAACELVGGTEELAMPIACAIEMIHVMTLLHDDMPCLD 175 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIG 155 N IRRGKPT H + E TA+IAG LL+ AFE I+ ++ N R M+S L G Sbjct: 176 NDDIRRGKPTNHKVFGEGTALIAGVALLSVAFEHIAVSTSKTVGNDRILRMVSELGRTTG 235 Query: 156 LQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 QG++GGQ LD+ D ++ + I KT L+ + GAI+ AS++E ER+R Sbjct: 236 SQGIMGGQFLDLVSEGDASVNLQTLQWIHAHKTAVLLESSVVCGAIIGGASEDEIERIRR 295 Query: 213 FGENLGIIFQLADDLLD 229 + +GI+FQ+ DD+LD Sbjct: 296 YASCVGILFQVVDDILD 312 >gi|118443490|ref|YP_878055.1| geranyltranstransferase [Clostridium novyi NT] gi|118133946|gb|ABK60990.1| geranyltranstransferase [Clostridium novyi NT] Length = 289 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 130/219 (59%), Gaps = 10/219 (4%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 ++ L + +N + A++Y++ +GGK+IR L+ +++ N+ + + AIE Sbjct: 11 NVWLNNYFENKGSYNKIVYDAMKYSVEVGGKRIRPTLMLCTYNVYKDNYKDIMPMACAIE 70 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLL A I+ + L + Sbjct: 71 MIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIMFN--YSLNN 128 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACES 195 +IR+ + ++ G++GM+GGQ++DI E ID + + K KTG L+ + Sbjct: 129 DIRALKASKIISEASGVEGMIGGQVVDIISEGKKITIDNLKY--MHKNKTGKLIKSPIIA 186 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 GAI+ +A + + + L FGE LG+ FQ+ DD+LD D+ Sbjct: 187 GAILGNAPKEDIDILEEFGEKLGLAFQIKDDILDVIGDV 225 >gi|225430848|ref|XP_002273789.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 368 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 74/192 (38%), Positives = 111/192 (57%), Gaps = 4/192 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++RY+LL GGK++R L L + TA+ A+E IH SL+HDDLP MDN + Sbjct: 107 SMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDL 166 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H + E AI+AG+ LL +AFE +++ + + + L +IG +G++ Sbjct: 167 RRGKPTNHKVFGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLV 226 Query: 161 GGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ++DI E + + + I KT AL+ A GAI+ S E E+LR F + Sbjct: 227 AGQVVDICSEGLKDVGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCI 286 Query: 218 GIIFQLADDLLD 229 G++FQ+ DD+LD Sbjct: 287 GLLFQVVDDILD 298 >gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3] gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3] Length = 296 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 IGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVE 229 >gi|32265833|ref|NP_859865.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449] gi|32261882|gb|AAP76931.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449] Length = 288 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 80/190 (42%), Positives = 112/190 (58%), Gaps = 15/190 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK+ R LV C VN L A +IECIH YSLIHDDLP MDN +RR Sbjct: 39 GGKRFRPALVF-CV----VNALAPQLIKNAFLPALSIECIHTYSLIHDDLPCMDNAPLRR 93 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G T+H +YDE A++ G+GL TYAF ++S + +L +R +L+ SL N G+ GM+ G Sbjct: 94 GHATLHTKYDETLALLVGDGLNTYAFALLS--QARLDAQVRLELIHSLALNAGIGGMVLG 151 Query: 163 QMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 QMLD +D+ + ++ +I KT L+ + + GAI+++A + + FG LGI Sbjct: 152 QMLDCAFEDKKLSLQELQIIHTNKTAKLIATSLQFGAIISNAKAHFASSIYEFGLKLGIY 211 Query: 221 FQLADDLLDC 230 FQL DDL+D Sbjct: 212 FQLRDDLIDA 221 >gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera] Length = 308 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 74/196 (37%), Positives = 113/196 (57%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ ++RY+LL GGK++R L L + TA+ A+E IH SL+HDDLP MD Sbjct: 43 KVHESMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMD 102 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H + E AI+AG+ LL +AFE +++ + + + L +IG Sbjct: 103 NDDLRRGKPTNHKVFGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGS 162 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E + + + I KT AL+ A GAI+ S E E+LR F Sbjct: 163 EGLVAGQVVDICSEGLKDVGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKF 222 Query: 214 GENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 223 ARCIGLLFQVVDDILD 238 >gi|54308001|ref|YP_129021.1| putative geranyltranstransferase [Photobacterium profundum SS9] gi|46912427|emb|CAG19219.1| putative geranyltranstransferase [Photobacterium profundum SS9] Length = 300 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 109/200 (54%), Gaps = 5/200 (2%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ ++Y LLGGK+ R FL + AA+ECIH YSLIHDDLP+MD+ Sbjct: 36 LVKTMKYGTLLGGKRARPFLTYITGQMLGAECADLDTPAAAVECIHAYSLIHDDLPAMDD 95 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGL 156 +RRG PT HI +DE AI+AG+ L T AFEI++ K N R ++ L G Sbjct: 96 DELRRGHPTCHIAFDEALAILAGDALQTLAFEILADGKLNDDGNTQRIAMIKELAQASGA 155 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213 GM GQ LD++ E +D Q+ I K KTGAL+ A GA+ A +L F Sbjct: 156 AGMCVGQALDLEAEGKHVDLQQLETIHKHKTGALIRCAVRLGALAAGQKGVAVLPQLNQF 215 Query: 214 GENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD D Sbjct: 216 ADAIGLAFQVQDDILDVTSD 235 >gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15] gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15] Length = 296 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 85/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANGLQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229 >gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676] gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676] Length = 296 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 85/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANGLQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229 >gi|197301783|ref|ZP_03166853.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC 29176] gi|197299223|gb|EDY33753.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC 29176] Length = 296 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 126/222 (56%), Gaps = 10/222 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 ++I+ IL L + + +T ++ A+ Y+L+ GGK++R L+ E LF Sbjct: 12 EKIEKILKKYLPEKKGYQRT-----IMEAMEYSLMAGGKRLRPMLMWESYRLFGGEGAAI 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 AAIE IH YSL+HDDLP+MDN RRG+ T HI Y E I+AG+ LL YAFE Sbjct: 67 EPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETAC 126 Query: 132 SSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGAL 188 + + + + +R + + L G+ GM+GGQ++D+Q+ + + + I ++KT AL Sbjct: 127 RAFEEESEHALRIGKALKILADKAGIYGMIGGQVVDVQESGKAVSGEVLDFIYRLKTSAL 186 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + + +GA++A A + + R+ +G+ FQ+ DD+LD Sbjct: 187 IEASMMAGAVLAGAEEGQVSRMEQIAGKIGLAFQIQDDILDV 228 >gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota subsp. sativus] Length = 365 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 117/201 (58%), Gaps = 4/201 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q ++ ++RY+LL GGK++R L LF + A+ A+E IH SL+HDDL Sbjct: 96 QEPVKIHESMRYSLLAGGKRVRPILSIAACELFGGHEAVAMPSACAVEMIHTMSLMHDDL 155 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT H Y E A++AG+ +L AF ++++ + + + ++++ L Sbjct: 156 PFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLALAFHLVATETSGVSSSQVVRVIVELAK 215 Query: 153 NIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 IG +G++ GQ++D+ D + + I + KT AL+ + GAI+ A+ E E+ Sbjct: 216 AIGAEGLVAGQIVDVCSEGDPNLGLKDLEFIHRSKTAALLEGSVVMGAILGGANDEEVEK 275 Query: 210 LRCFGENLGIIFQLADDLLDC 230 +R + +G++FQ+ DD+LD Sbjct: 276 VRKYARCIGLLFQVVDDILDV 296 >gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var. palaestina] Length = 359 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 127/224 (56%), Gaps = 10/224 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + E ++R++ LDD + +H ++ A+RY+LL GGK++R L L Sbjct: 73 MAEMAERVNQALDD-------SVPLRHPLKIHEAMRYSLLAGGKRVRPILCIASCELVGG 125 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A + A+E IH SLIHDDLP MDN RRG PT H + E TA++AG+ LL+ A Sbjct: 126 DPVAAHPIACALEMIHTMSLIHDDLPCMDNDDFRRGMPTNHKAFGEETAVLAGDALLSLA 185 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185 FE +++ T + + +++ L +G G++GGQ++DI + I+ +++ I KT Sbjct: 186 FEHVATRSTGVSADRVVRVIAELGKCVGSDGLVGGQIVDIASAGKQIELSELEYIHLHKT 245 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ + GAIM + ERLR + +G++FQ+ DD+LD Sbjct: 246 AILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILD 289 >gi|255994613|ref|ZP_05427748.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989] gi|255993326|gb|EEU03415.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989] Length = 297 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 84/233 (36%), Positives = 128/233 (54%), Gaps = 20/233 (8%) Query: 20 LDDLLLQTASHMQTQHNDRLLS----------AIRYALL-GGKKIRSFLVTECASLFNVN 68 +DD+ + + T+ + LLS A+ Y+L GGK++R L+ E A + Sbjct: 1 MDDMFYKYKHDIDTKMREILLSKEEIAKPLREAMEYSLYAGGKRVRPVLLMEAARAVGGD 60 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + L AAIE IH YSLIHDDLP++D+ RRGK T H + E AI+AG+GL A+ Sbjct: 61 PGSVLDYAAAIEFIHTYSLIHDDLPALDDDEYRRGKKTNHKVFGEAMAILAGDGLQALAY 120 Query: 129 EIISS---PKTQLKDNIRSQLMLS--LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK- 182 E++ S + D I ++ + + G + M+ GQ++DI + D+ + M++K Sbjct: 121 EVMLSCIAKSDNMGDEILKKIKAANEIVMAAGTEAMVSGQVMDI-NSCSDKDSLTMLEKM 179 Query: 183 --MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ A GAI+A A + + R +GEN+G+ FQ+ DD LD D Sbjct: 180 HRMKTGALITAAVVVGAILAGADERQVAAFRKYGENIGLAFQMVDDKLDVSGD 232 >gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264] gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4] gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24] gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550] gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171] gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264] gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550] gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24] gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4] gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171] Length = 296 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 85/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANGLQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229 >gi|237747173|ref|ZP_04577653.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS] gi|229378524|gb|EEO28615.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS] Length = 299 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 83/239 (34%), Positives = 130/239 (54%), Gaps = 15/239 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ + LQ I+ L DLL + Q + L A+RYA+L GGK+IR LV Sbjct: 5 MSENFNAWLQSVQSAIEKSLSDLLPS-----EKQFPEPLHQAMRYAVLDGGKRIRPLLVF 59 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +LF + +A+E IH YSLIHDD+P MDN +RRGKPT+H+Q+ E A++A Sbjct: 60 ATGALFGAPVAVMTQTASAVEMIHAYSLIHDDMPCMDNDVLRRGKPTLHVQFGEAMALLA 119 Query: 120 GNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175 G+ L AF ++S ++ D+ + ++ + L+ G GM GGQ +D+ + + Sbjct: 120 GDALQAQAFIVLS----KIDDDAKLVAERLRILSEASGSLGMCGGQAIDLDSVGKNLSID 175 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 Q+ + ++KTGAL+ + GA A E+ L + + +G+ FQ+ DD+LD D Sbjct: 176 QLEQMHRLKTGALLKASVMLGAFSAKRPDPEEITALDAYAKAIGLAFQVVDDILDVTAD 234 >gi|56695165|ref|YP_165512.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3] gi|56676902|gb|AAV93568.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3] Length = 288 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 120/199 (60%), Gaps = 8/199 (4%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+ + GGK++R FLV E A L +V+ A+ AIE +H YSL+HDDLP MD+ +R Sbjct: 32 AMAWTTEGGKRLRGFLVLESARLHDVDEARAIWPATAIEALHAYSLVHDDLPCMDDDDLR 91 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG+PT H+++DE TA++AG+ L + AFE+ + P+ + R+ L L+L G +GM+ Sbjct: 92 RGRPTAHVKWDEGTAVLAGDALHSLAFELCTRPEVGTAET-RATLALTLAQAAGARGMVL 150 Query: 162 GQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ LDI E + Q+ +Q KTGAL+ +A + A + + + LR + L Sbjct: 151 GQALDIAAETAPKPLTLDQITRLQAGKTGALIEWAAAA---GAVLAGADPDPLRQYARAL 207 Query: 218 GIIFQLADDLLDCEEDLPK 236 G+ FQ+ADD+LD E D K Sbjct: 208 GLAFQIADDILDVEGDAEK 226 >gi|210615786|ref|ZP_03290767.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787] gi|210150122|gb|EEA81131.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787] Length = 296 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 11/201 (5%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ A+ Y+LL GGK++R L+ E LF + AAIE IH YSL+HDDLP+MD Sbjct: 31 EIMEAMEYSLLAGGKRLRPMLMRETYVLFGGDEELIEPFMAAIEMIHTYSLVHDDLPAMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-----PKTQLKDNIRSQLMLSLT 151 N RRG+ T H+ Y E I+AG+ LL +AFE P+ ++ Q M L+ Sbjct: 91 NDDYRRGRKTTHVVYGEAMGILAGDALLNFAFETAVKAFAMCPQKSIEIG---QAMRILS 147 Query: 152 HNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G+ GM+GGQ++D++ + + + + I ++KT AL+ A GA++A AS+ E ++ Sbjct: 148 EKAGIYGMIGGQVVDVKSAGQAVSKEVLDFIYELKTSALIECAMMIGAVLAGASETEVQK 207 Query: 210 LRCFGENLGIIFQLADDLLDC 230 + + +G+ FQ+ DD+LD Sbjct: 208 IEQIAKYVGVAFQIQDDILDV 228 >gi|332524231|ref|ZP_08400457.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2] gi|332107566|gb|EGJ08790.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2] Length = 296 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 115/194 (59%), Gaps = 4/194 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY +L GGK++R LV + ALR A+E IH YSL+HDD+P MDN + Sbjct: 37 AMRYGVLDGGKRLRPLLVMAACEALGGSREAALRSACAVELIHAYSLVHDDMPCMDNDVL 96 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH++Y E A++AG+ + AFEI+ +P ++ +++ L+ L G GM Sbjct: 97 RRGKPTVHVKYGEAQAMLAGDAMQALAFEIL-TPDEGVEPALQASLVRLLARAAGHAGMA 155 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQ +D+ + +DE + + + KTGAL+ + + GA + + L +GE +G Sbjct: 156 GGQAIDLANTGRLLDEATLREMHRKKTGALLLVSVQMGAACGSPAPATWQALSEYGEAIG 215 Query: 219 IIFQLADDLLDCEE 232 + FQ+ DD+LDC + Sbjct: 216 LAFQVVDDILDCTQ 229 >gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271] gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271] Length = 296 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVE 229 >gi|322382773|ref|ZP_08056617.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153242|gb|EFX45688.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 298 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 84/241 (34%), Positives = 129/241 (53%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G + + LQ +++++ L+ L +Q + L ++ Y+L+ GGK+IR LV Sbjct: 2 GSIQAYLQTRARQVEEALEGSL-----PVQWEFPADLRESMLYSLMAGGKRIRPVLVLAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 F + + V AIE IH YSLIHDDLP+MDN RRGKPT H ++ E AI+AG+ Sbjct: 57 VESFGLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRGKPTNHKKFGEAMAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQ--DEFIDET 175 LLT+AF ++ Q ++ +L++ I G +GM+GGQ D+Q Sbjct: 117 ALLTHAFYSVTQAARQ--GGFSAEQVLAVVEEISVYAGARGMVGGQAADMQGVQGITRLE 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++ I KT L+ + +GAI+A A + + L FG +G+ FQ+ DD+LD D Sbjct: 175 ELEYIHACKTSDLIICSLRAGAILAGADEKQLRALTVFGSCIGMAFQIMDDILDVAGDEA 234 Query: 236 K 236 K Sbjct: 235 K 235 >gi|167464892|ref|ZP_02329981.1| Polyprenyl synthetase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 303 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 84/241 (34%), Positives = 129/241 (53%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G + + LQ +++++ L+ L +Q + L ++ Y+L+ GGK+IR LV Sbjct: 7 GSIQAYLQTRARQVEEALEGSL-----PVQWEFPADLRESMLYSLMAGGKRIRPVLVLAA 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 F + + V AIE IH YSLIHDDLP+MDN RRGKPT H ++ E AI+AG+ Sbjct: 62 VESFGLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRGKPTNHKKFGEAMAILAGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQ--DEFIDET 175 LLT+AF ++ Q ++ +L++ I G +GM+GGQ D+Q Sbjct: 122 ALLTHAFYSVTQAARQ--GGFSAEQVLAVVEEISVYAGARGMVGGQAADMQGVQGITRLE 179 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++ I KT L+ + +GAI+A A + + L FG +G+ FQ+ DD+LD D Sbjct: 180 ELEYIHACKTSDLIICSLRAGAILAGADEKQLRALTVFGSCIGMAFQIMDDILDVAGDEA 239 Query: 236 K 236 K Sbjct: 240 K 240 >gi|146310549|ref|YP_001175623.1| geranyltranstransferase [Enterobacter sp. 638] gi|145317425|gb|ABP59572.1| farnesyl-diphosphate synthase [Enterobacter sp. 638] Length = 299 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 86/207 (41%), Positives = 127/207 (61%), Gaps = 5/207 (2%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q N L++A+ Y ALLGGK++R FLV ++F ++ T AA+ECIH YSLIHD Sbjct: 25 QPFQNTPLVAAMHYGALLGGKRLRPFLVYATGNMFGISSNTLDAPAAAVECIHAYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149 DLP+MD+ +RRG+PT HI++ E AI+AG+ L T AF I+S +P ++ D R ++ Sbjct: 85 DLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMIEVADRDRLAMVSE 144 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G+ GM GGQ LD++ E ++ Q+ I + KTGAL+ A GA+ A ++ Sbjct: 145 LAMASGVAGMCGGQALDLEAEGHQVNLEQLERIHRHKTGALIRAAVRLGALSAGERGSKA 204 Query: 208 -ERLRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 205 LPILDRYAESIGLAFQVQDDILDVVGD 231 >gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916] gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916] Length = 317 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 81/226 (35%), Positives = 125/226 (55%), Gaps = 14/226 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + ++ LDD + + + L A+RY+LL GGK++R L L Sbjct: 26 LGSQKQLVEAALDD-------SLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGG 78 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A+ A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ LLT A Sbjct: 79 DPALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRA 138 Query: 128 FEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183 FE++S SP + ++ LSL G G++GGQ++D++ E +D + I Sbjct: 139 FEMVSLRSPGVPAERLLKVVAELSLVA--GAPGLVGGQVVDLECEGKDVDLDTLEYIHLH 196 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ +GA++ A + + + LR + +G+ FQ+ DD+LD Sbjct: 197 KTGALLKACVITGALIGGADEAQLDSLRTYARGIGLAFQIVDDILD 242 >gi|152990006|ref|YP_001355728.1| geranyltranstransferase [Nitratiruptor sp. SB155-2] gi|151421867|dbj|BAF69371.1| geranyltranstransferase [Nitratiruptor sp. SB155-2] Length = 290 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 126/215 (58%), Gaps = 7/215 (3%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVG 76 + +D L + H+Q+ H A+ Y L GGK+ R L+ N + +AL V Sbjct: 6 LFEDHLQKNLPHVQSFH-PFYTDALGYMLQAGGKRFRPLLLLSIVQAKNPLLIPSALDVA 64 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H YSLIHDDLP MD+ +RRGK T+H +YDE+TA++ G+ L TYAF I+ K+ Sbjct: 65 MAIEIFHTYSLIHDDLPVMDDADLRRGKETLHKKYDELTAVLVGDALNTYAFYCIA--KS 122 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACE 194 L + R++L L N G++GM+ GQ+LD +++ + Q+ + KT L+ + + Sbjct: 123 ALSSDTRAKLTEILAQNGGIEGMVHGQILDCYFENQKLSLEQLQQLHINKTAKLIAASLQ 182 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA++ E+ RL FG +LG++FQ+ DD++D Sbjct: 183 MGAVIVDLPFIEQNRLYNFGIDLGLLFQIQDDIID 217 >gi|254509029|ref|ZP_05121134.1| geranyltranstransferase [Vibrio parahaemolyticus 16] gi|219548064|gb|EED25084.1| geranyltranstransferase [Vibrio parahaemolyticus 16] Length = 294 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 130/241 (53%), Gaps = 20/241 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L S Q ++++++ LD T H Q L+ A+RY LL GGK+ R FLV Sbjct: 1 MQEALTSLQQRSNQQLERWLD-----TLPHQQQP----LIDAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + AAIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGSSLEQLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFID 173 G+ L T AF I++ SP+ + + R ++ L G GM GQ LD+ ++ + Sbjct: 112 GDALQTLAFTILAEGQLSPEAEAQ---RIMMVKVLAEASGAAGMCMGQALDLAAENRIVS 168 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232 ++ I + KTGALM A GA+ A E L + + +G+ FQ+ DD+LD Sbjct: 169 LQELEEIHRNKTGALMKCAIRMGALAAGEKGIEVLPLLDKYADAIGLAFQVQDDILDVIS 228 Query: 233 D 233 D Sbjct: 229 D 229 >gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 300 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/225 (35%), Positives = 125/225 (55%), Gaps = 10/225 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + RI++ LD + + + ++L A+RY+LL GGK++R L L Sbjct: 15 LAKARTRIESALD-------ASLGPERPNQLREAMRYSLLAGGKRLRPILCLAACELTGS 67 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A+ AIE IH SLIHDDLPSMDN +RRG+PT H Y E AI+AG+ LLT A Sbjct: 68 DSENAISTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGEAIAILAGDALLTRA 127 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 FE+++ + + +++ L+ G G++GGQ+ D++ E +D + I KT Sbjct: 128 FEMVALRSPNVPKDRLLKVVGELSLVAGAPGLVGGQVEDLESEGKAVDLDTLEFIHIHKT 187 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 GAL+ + GA++ A ++ L + + +G+ FQ+ DD+LD Sbjct: 188 GALLKASVVCGALIGGADEDLLIALSTYAKGIGLAFQIVDDILDV 232 >gi|260767267|ref|ZP_05876208.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio furnissii CIP 102972] gi|260617775|gb|EEX42953.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio furnissii CIP 102972] gi|315180898|gb|ADT87812.1| geranyltranstransferase [Vibrio furnissii NCTC 11218] Length = 294 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/235 (36%), Positives = 127/235 (54%), Gaps = 14/235 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S N++++D L+ L N L+ A+RY LL GGK+ R +LV Sbjct: 4 ALSSFQHRNNEQLDLWLNRL---------PNQNLPLIEAMRYGLLLGGKRARPYLVYITG 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + +AIECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+ G+ Sbjct: 55 QMLGCEPSDLDTPASAIECIHAYSLIHDDLPAMDDDELRRGKPTCHIKFDEATAILTGDA 114 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L T AF I++ + + R +++ +L G QGM GQ LD+ ++ + ++ Sbjct: 115 LQTLAFTILAEGTLSDAGEMNRVKMIQALAEASGAQGMCLGQALDLAAENRLVALDELEN 174 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I + KTGALM A GA+ A H + L + + +G+ FQ+ DD+LD D Sbjct: 175 IHRNKTGALMRCAIRMGAMAAGHKGLDVLPHLDRYADAVGLAFQVQDDILDIISD 229 >gi|325205345|gb|ADZ00798.1| geranyltranstransferase [Neisseria meningitidis M04-240196] Length = 298 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/196 (39%), Positives = 115/196 (58%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT HI+Y E TA++ G+ L T AF++++ P + L + + ++ L G +GM Sbjct: 99 RRGKPTCHIKYGEATALLVGDALQTQAFDVLARP-SGLPASRQLAMLSVLAKAGGSRGMA 157 Query: 161 GGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + Q + Q +KTGAL+ A GA+ + S++ L + L Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301] gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301] Length = 299 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/224 (36%), Positives = 126/224 (56%), Gaps = 10/224 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L++ K I+ LD + ++ + L ++RY+LL GGK+IR L SL Sbjct: 14 LKQTKKVIEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGG 66 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ LLT A Sbjct: 67 EPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRA 126 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S + N ++ L+ G G++GGQ++D++ E +D + I KT Sbjct: 127 FEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLDTLEYIHLHKT 186 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GAL+ +GA++A A++ + L + E +G+ FQ+ DD+LD Sbjct: 187 GALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILD 230 >gi|254671578|emb|CBA09234.1| geranyltranstransferase [Neisseria meningitidis alpha153] Length = 298 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/196 (39%), Positives = 115/196 (58%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGGTVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT HI+Y E TA++ G+ L T AF++++ P + L + + ++ L G +GM Sbjct: 99 RRGKPTCHIKYGEATALLVGDALQTQAFDVLARP-SGLPASRQLAMLSVLAKAGGSRGMA 157 Query: 161 GGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + Q + Q +KTGAL+ A GA+ + S++ L + L Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|312862780|ref|ZP_07723020.1| geranyltranstransferase [Streptococcus vestibularis F0396] gi|322516632|ref|ZP_08069546.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124] gi|311101640|gb|EFQ59843.1| geranyltranstransferase [Streptococcus vestibularis F0396] gi|322124902|gb|EFX96326.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124] Length = 290 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 119/200 (59%), Gaps = 6/200 (3%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L++AI Y++ GGK+IR + + F + + V A++E IH SLIHDDLP+MD Sbjct: 26 LITAILYSVDSGGKRIRPLIFLDLLEGFGLELTPSHFDVAASLEMIHTGSLIHDDLPAMD 85 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRG+ T H ++DE TAI+AG+ L F +++ +T+L IR QL+ +L++ G Sbjct: 86 NDDYRRGRLTNHKKFDEATAILAGDSLFLDPFALVA--QTELSAEIRVQLIQALSYASGT 143 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQMLD++ E +D +Q+ I + KTG L+ F + I++ E L+ G Sbjct: 144 FGMVGGQMLDMKGEDLELDLSQLAKIHENKTGKLLTFPFVAAGIVSQQEDRVMENLKEAG 203 Query: 215 ENLGIIFQLADDLLDCEEDL 234 +G+ FQ+ DD+LD D Sbjct: 204 RLIGLAFQVRDDILDVTADF 223 >gi|311693472|gb|ADP96345.1| geranyltranstransferase [marine bacterium HP15] Length = 298 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/229 (35%), Positives = 127/229 (55%), Gaps = 11/229 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 L+ R+D LD + + ++ + RL A+RY++LGG K+IR L A Sbjct: 12 LETCRARVDAELDRCITRDSA------SGRLQEAMRYSVLGGGKRIRPALCLAAAKAMGQ 65 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AL ++E IH YSLIHDDLP+MD+ +RRG+PT HI +DE TAI+AG+ L A Sbjct: 66 TGDEALIPACSVELIHAYSLIHDDLPAMDDDELRRGRPTTHIAFDEATAILAGDALQALA 125 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185 F ++ L +++R ++ L G GM+GGQ +D++ + + Q+ + + KT Sbjct: 126 FGWLAE-APGLSESVRLIMVRELARASGHGGMVGGQAIDLESVGKTLALAQLETMHRHKT 184 Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ A + + L + + LG+ FQ+ DDLLD E D Sbjct: 185 GALIETSVRIGALTAPSVDEQALASLTQYAKALGLAFQVQDDLLDIEGD 233 >gi|315125809|ref|YP_004067812.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas sp. SM9913] gi|315014323|gb|ADT67661.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas sp. SM9913] Length = 295 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 123/204 (60%), Gaps = 4/204 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + ++ + A Y+++ GGK++R FLV + + + AAIECIH YSL+HDDL Sbjct: 27 ESDNTIKEATHYSVMNGGKRLRPFLVYTTGKILGADKRDLDVLAAAIECIHSYSLVHDDL 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MD+ +RRG+PT HI Y E AI+AG+ L T AFE+I+ + + +++ +L H Sbjct: 87 PAMDDDDLRRGRPTCHIVYGEAQAILAGDALQTLAFELIAKHTFKCSTEAQLKMIAALAH 146 Query: 153 NIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 GLQGM+ GQ DI D+ I ++ I K+KTGAL+ A GA+ A + SQ + Sbjct: 147 ASGLQGMVAGQGRDIAATDKVITVDELERIHKLKTGALINCAITLGALCAPNTSQQTLDN 206 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L FG +G+ FQ+ DD+LD E D Sbjct: 207 LSTFGYAIGLAFQVHDDILDVEGD 230 >gi|257455692|ref|ZP_05620921.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60] gi|257446975|gb|EEV21989.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60] Length = 319 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 116/202 (57%), Gaps = 15/202 (7%) Query: 45 YALL-GGKKIRSFLVTEC-------ASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLP 93 YA+ GGK++R LV SL N +H + R A+EC+H YSL+HDDLP Sbjct: 55 YAMTNGGKRVRPLLVAATFATVKTDNSLANPSHQLSNDVRRAMMAVECLHGYSLVHDDLP 114 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MD+ +RRG+PT HI Y E A++AG+ L T AFE ++ T +N LS T Sbjct: 115 CMDDDALRRGRPTTHIAYGEAAAMLAGDVLQTLAFEALT--HTYFGENSEFATPLSATFA 172 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + M+ GQMLD+ E + +T++ I + KTGAL+ + GAI A+A+ +E++ L Sbjct: 173 PRARRMVMGQMLDLNGEHQQLSQTELEAIHRDKTGALIEASVLMGAICANATDSERQALS 232 Query: 212 CFGENLGIIFQLADDLLDCEED 233 F + +G+ FQ+ DD+LD D Sbjct: 233 SFAQQIGLAFQVQDDILDVTAD 254 >gi|241894940|ref|ZP_04782236.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313] gi|241871658|gb|EER75409.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313] Length = 290 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/223 (39%), Positives = 133/223 (59%), Gaps = 14/223 (6%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 +I+ L++ L ++AS + Q A+RYA++ GGK++R L + + L Sbjct: 13 QIEHTLENELAKSASVAELQE------AMRYAVMAGGKRLRPMLSLAVIQTYGLPVNEYL 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +V +AIE IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+ L AFE ++ Sbjct: 67 KVASAIELIHTYSLIHDDLPAMDDDELRRGKPTTHRAFGEDTAILAGDALQPLAFEWLTD 126 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTGAL 188 L D R QL++++ G GM+ GQ+LDI+ + ETQ I KTGAL Sbjct: 127 LDQPLNDAQRVQLVIAMAQAAGGAGMVAGQVLDIEAMKTSAVTLAETQA--IHYHKTGAL 184 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + +A ++GAIMA+A+++ + L FG G+ FQ+ DD+ D + Sbjct: 185 IAYALQAGAIMANANEDIQNILHDFGMAYGLAFQIKDDIDDYQ 227 >gi|62959201|gb|AAY23708.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-310] Length = 145 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 94/145 (64%), Gaps = 2/145 (1%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP MD+ +R GKPT+H +DE TA++AG+ L AF+I++ P T +R++L+ Sbjct: 1 HDDLPGMDDDEMRHGKPTLHKAFDEATAVLAGDSLHALAFDILTQPDTSTDPFVRAELVA 60 Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 +L G GM GGQM+DI +++ D QV +Q++KTGAL+ + E GA++ + Sbjct: 61 TLARASGHDGMAGGQMMDIVSEEQSYDLRQVTRLQQLKTGALLAASVEMGAVLGRVAPEG 120 Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231 + LR + ++G+ FQ+ADD+LD E Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145 >gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120] gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120] Length = 309 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 119/203 (58%), Gaps = 11/203 (5%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + +++ ++RY+LL GGK++R L + + A+ A+E IH SLIHDDLP Sbjct: 41 YPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGTIEIAMPTACAVEMIHTMSLIHDDLP 100 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLT 151 +MDN RRG T H Y E AI+AG+GLL YAFE ++ +P++ +D + Q++ L Sbjct: 101 AMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAFEFVAIRTPESVPRDRVL-QVVARLG 159 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALM--CFACESGAIMAHASQNE 206 +G G++GGQ++D+ E +T + I KT AL+ C C G I+A AS Sbjct: 160 RALGAAGLVGGQVVDLDSEGKSDTSLETLNFIHNHKTAALLEACVVC--GGILAGASSEN 217 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 +RL + +N+G+ FQ+ DD+LD Sbjct: 218 VQRLSRYSQNIGLAFQIIDDILD 240 >gi|291536359|emb|CBL09471.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis M50/1] Length = 296 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 117/201 (58%), Gaps = 5/201 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + ++ A+ Y+ L GGK++R L+ E LF AAIE IH YSL+HDDLP Sbjct: 28 YQKTVIEAMNYSFLAGGKRLRPILMLETYRLFGGKSKVIEPFMAAIEMIHTYSLVHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTH 152 +MDN RRGK T H+ Y E AI+AG+ LLTYAFE + + ++ + + L+ Sbjct: 88 AMDNDEYRRGKKTTHVVYGEAMAILAGDALLTYAFETAAKALDIEPQNPGIGKAIRILSA 147 Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G+ GM+GGQ +D++ E + + ++ I ++KT AL+ + GA++A A+ +E++ Sbjct: 148 KAGIYGMVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKI 207 Query: 210 LRCFGENLGIIFQLADDLLDC 230 + +G+ FQ+ DD+LD Sbjct: 208 VEEVASKVGLAFQIQDDILDV 228 >gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 372 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 114/199 (57%), Gaps = 3/199 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q+ ++ A+RY+LL GGK++R L L + TA+ A+E IH SLIHDDL Sbjct: 104 QNPVKIHDAMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAMEMIHTMSLIHDDL 163 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT H + E TAI+AG+ LL+++FE ++ + + + + L Sbjct: 164 PCMDNDDLRRGKPTNHKMFGEETAILAGDALLSFSFEHVARSTKNVSPDRVVRAIAELGS 223 Query: 153 NIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +G +G++ GQ++DI E D + + I KT L+ + GAI+ A ER+ Sbjct: 224 AVGSEGLVAGQIVDIDSEGKDVSVSDLEYIHIHKTAKLLEASVVCGAILGGADDESVERV 283 Query: 211 RCFGENLGIIFQLADDLLD 229 R + +G++FQ+ DD+LD Sbjct: 284 RKYARCIGLLFQVVDDILD 302 >gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa] Length = 371 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 114/196 (58%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ ++RY+LL GGK+IR L L + TA+ A+E +H SL+HDDLP MD Sbjct: 106 KIQESMRYSLLAGGKRIRPMLCIAACELVGGDESTAMPAACAVEMVHTMSLMHDDLPCMD 165 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H + E A++AG+ +L ++FE ++S + +++ L +G Sbjct: 166 NDDLRRGKPTNHKVFTEDVAVLAGDAMLAFSFEHVASLTKGVCSERIVRVIYELAKCVGC 225 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E +DE + I KT AL+ + GAI+ S E E+LR F Sbjct: 226 EGLVAGQVVDICSEGMDEVGLEHLEFIHLNKTAALLEGSVVLGAILGGGSDEEVEKLRNF 285 Query: 214 GENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 286 ARCIGLLFQVVDDILD 301 >gi|54295170|ref|YP_127585.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens] gi|53755002|emb|CAH16490.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens] Length = 298 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 117/199 (58%), Gaps = 14/199 (7%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 SA+ YAL GGK+IR LV L +V+ + AA+E HCYSLIHDDLP+MDN Sbjct: 33 SALHYALFSGGKRIRPILVYLAGDLIDVDQEVLDIIAAALELTHCYSLIHDDLPAMDNDD 92 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----G 155 +RRGKP+ H +DE TAI+ G+G+ A E++ +L + + ++++T + G Sbjct: 93 LRRGKPSCHKAFDEATAILVGDGMQALAIEVV---LMRLSPLLPAAQVVAITQVLVNASG 149 Query: 156 LQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERL 210 + GM+ GQ LD+ + + E Q+ I +KTG L+ AC + A S+ K L Sbjct: 150 ISGMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLI-LACFEMVLAAQHEVSEQIKSAL 208 Query: 211 RCFGENLGIIFQLADDLLD 229 R +G+++G++FQ+ DD LD Sbjct: 209 RTYGKHIGLVFQMQDDYLD 227 >gi|218282379|ref|ZP_03488661.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989] gi|218216665|gb|EEC90203.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989] Length = 280 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 9/205 (4%) Query: 31 MQTQHND--RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 ++ Q ND R A+ Y+L+ GGK++R L+ + ++ AIE IH YSL Sbjct: 11 VRVQENDDSRTKDAMAYSLMNGGKRVRPMLLFSVLEGYGMDAHVGYPCACAIEMIHTYSL 70 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDDLP+MDN +RRGKP+ H YDE TAI+AG+GLLT AFE++ + K + L+ Sbjct: 71 VHDDLPAMDNDDLRRGKPSCHKAYDEATAILAGDGLLTKAFEVVLDSECSAKQKV--ALV 128 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204 +L+ G+ GM+ GQ LD+Q E ++Q++ KT L+ G I+A+ Sbjct: 129 KALSWYAGIDGMIYGQTLDLQAENDTNPTFALLQEIDHYKTSKLLTLPLVCGCILANKF- 187 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 ++ + R G LG+ FQ+ DD+LD Sbjct: 188 DDIDHFRKIGLVLGLEFQMQDDILD 212 >gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata] Length = 365 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 116/205 (56%), Gaps = 4/205 (1%) Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 S + + +++ A+RY+LL GGK++R L L + A+ A+E IH SL Sbjct: 91 SAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLAACELVGGHESMAMPAACAVEMIHTMSL 150 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLP MDN +RRGKPT H + E A++AG+ LL +AFE I+ + + + Sbjct: 151 IHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAGDALLAFAFEHIAVSTVGVSTARIVRSI 210 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQ 204 L +IG +G++ GQ++DI E + + Q+ I KT AL+ + GAI+ S Sbjct: 211 GELAKSIGSEGLVAGQVVDICSEGLSDVGLEQLEFIHVHKTAALLEASVVLGAILGGGSD 270 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 E E+LR F +G++FQ+ DD+LD Sbjct: 271 IEIEKLRMFARYIGLLFQVVDDILD 295 >gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis] Length = 383 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 118/201 (58%), Gaps = 5/201 (2%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++ +++ A+RY+LL GGK+IR L L + A+ A+E IH SLIHDDL Sbjct: 113 RYPEKIHEAMRYSLLAGGKRIRPILTIAACELVGGSEELAMPTACAMEMIHTMSLIHDDL 172 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLT 151 PSMDN +RRGK T H + E TA++AG+ LL++AFE I+ S + + + +++ L Sbjct: 173 PSMDNDDLRRGKLTNHKVFGEGTAVLAGDALLSFAFEHIAVSTRKTVASHRVLRVVSELG 232 Query: 152 HNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 IG QG+ GGQ+ DI D + + I KT L+ A SGAI+ AS+NE E Sbjct: 233 KAIGSQGVAGGQVADITSEGDPSVGLETLEWIHIHKTAVLLECAVVSGAIIGGASENEIE 292 Query: 209 RLRCFGENLGIIFQLADDLLD 229 R + +G++FQ+ DD+LD Sbjct: 293 RTGRYARCVGLLFQVVDDILD 313 >gi|90579835|ref|ZP_01235643.1| putative geranyltranstransferase [Vibrio angustum S14] gi|90438720|gb|EAS63903.1| putative geranyltranstransferase [Vibrio angustum S14] Length = 300 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 85/217 (39%), Positives = 121/217 (55%), Gaps = 15/217 (6%) Query: 28 ASHMQTQ--HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 A+ + TQ + LL A++Y LLGGK+ R FL + V AA+ECIH Sbjct: 23 ANWLSTQPFADKALLKAMQYGTLLGGKRARPFLTYVTGEMLGVTQDDLDTPAAAVECIHA 82 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSLIHDDLP+MD+ +RRG+PT HI +DE AI+AG+ L T AF+I+++ + N + Sbjct: 83 YSLIHDDLPAMDDDALRRGQPTCHIAFDEAIAILAGDALQTLAFDILANGQLSQDGNTQR 142 Query: 145 QLMLS-LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAH 201 M+S L G GM GQ LD+ E + Q+ +I + KTGAL+ A GA+ A Sbjct: 143 IAMVSELAKASGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAA- 201 Query: 202 ASQNEK-----ERLRCFGENLGIIFQLADDLLDCEED 233 +K +L + E +G+ FQ+ DD+LD D Sbjct: 202 ---GDKGVAILPQLDKYAEAIGLAFQVQDDILDVISD 235 >gi|218710368|ref|YP_002417989.1| geranyltranstransferase [Vibrio splendidus LGP32] gi|218323387|emb|CAV19564.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio splendidus LGP32] Length = 294 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 114/204 (55%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N L++A+RY LL GGK+ R FLV + +AIECIH YSLIHDDLP Sbjct: 26 QNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPASAIECIHAYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTH 152 +MD+ +RRG T HI+YDE TAI+ G+ L T AF I++ ++ R +++ L Sbjct: 86 AMDDDELRRGHQTCHIKYDEATAILTGDALQTLAFTILAEGTLSADGESNRVRMIQRLAE 145 Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNE-KER 209 G QGM GQ LDI+ E T ++ + + KTGALM A GA+ A E + Sbjct: 146 ASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQ 205 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + + +G+ FQ+ DD+LD D Sbjct: 206 LDKYADAIGLAFQVQDDILDIISD 229 >gi|306820732|ref|ZP_07454359.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551231|gb|EFM39195.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 295 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 121/204 (59%), Gaps = 7/204 (3%) Query: 35 HNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 ++ +++ ++ Y+LLGG K++R L E LF+++ L + +E IH YSLIHDDLP Sbjct: 28 YSQKIIESMSYSLLGGGKRLRPVLFIETLKLFDIDFEQYLNIACVLEMIHTYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLT 151 +MDN +RRGKPT HI Y E AI+AG+ LL ++E++ K +NI + ++S Sbjct: 88 AMDNDDLRRGKPTNHIVYGEDVAILAGDSLLNLSYEVLFDFLYKNSSPNNILACRLIS-- 145 Query: 152 HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 N G+ GM+GGQ+ D+ +++ ID + I KT L+ + S A ++ S+ Sbjct: 146 KNAGIFGMIGGQVSDVINENKEIDIENLKYIHYNKTAKLIMASILSAAYISDCSKEYITY 205 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + N+G+ FQ++DD+LD D Sbjct: 206 LESYAYNIGMAFQISDDILDVVGD 229 >gi|84394354|ref|ZP_00993075.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01] gi|84375013|gb|EAP91939.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01] Length = 294 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 114/204 (55%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N L++A+RY LL GGK+ R FLV + +AIECIH YSLIHDDLP Sbjct: 26 QNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPASAIECIHAYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTH 152 +MD+ +RRG T HI+YDE TAI+ G+ L T AF I++ ++ R +++ L Sbjct: 86 AMDDDELRRGHQTCHIKYDEATAILTGDALQTLAFTILAEGTLSADGESNRVRMIQRLAE 145 Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNE-KER 209 G QGM GQ LDI+ E T ++ + + KTGALM A GA+ A E + Sbjct: 146 ASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQ 205 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + + +G+ FQ+ DD+LD D Sbjct: 206 LDKYADAIGLAFQVQDDILDIISD 229 >gi|69244725|ref|ZP_00602989.1| Polyprenyl synthetase [Enterococcus faecium DO] gi|257879355|ref|ZP_05659008.1| polyprenyl synthetase [Enterococcus faecium 1,230,933] gi|257881779|ref|ZP_05661432.1| polyprenyl synthetase [Enterococcus faecium 1,231,502] gi|257890181|ref|ZP_05669834.1| polyprenyl synthetase [Enterococcus faecium 1,231,410] gi|257893509|ref|ZP_05673162.1| polyprenyl synthetase [Enterococcus faecium 1,231,408] gi|258615761|ref|ZP_05713531.1| geranyltranstransferase [Enterococcus faecium DO] gi|260558797|ref|ZP_05830986.1| polyprenyl synthetase [Enterococcus faecium C68] gi|261206507|ref|ZP_05921207.1| polyprenyl synthetase [Enterococcus faecium TC 6] gi|289565417|ref|ZP_06445866.1| polyprenyl synthetase [Enterococcus faecium D344SRF] gi|293553173|ref|ZP_06673810.1| geranyltranstransferase [Enterococcus faecium E1039] gi|293560486|ref|ZP_06676978.1| geranyltranstransferase [Enterococcus faecium E1162] gi|293568312|ref|ZP_06679636.1| geranyltranstransferase [Enterococcus faecium E1071] gi|294614724|ref|ZP_06694626.1| geranyltranstransferase [Enterococcus faecium E1636] gi|294618979|ref|ZP_06698474.1| geranyltranstransferase [Enterococcus faecium E1679] gi|294621591|ref|ZP_06700756.1| geranyltranstransferase [Enterococcus faecium U0317] gi|314937883|ref|ZP_07845199.1| geranyltranstransferase [Enterococcus faecium TX0133a04] gi|314941374|ref|ZP_07848267.1| geranyltranstransferase [Enterococcus faecium TX0133C] gi|314950133|ref|ZP_07853419.1| geranyltranstransferase [Enterococcus faecium TX0082] gi|314951326|ref|ZP_07854380.1| geranyltranstransferase [Enterococcus faecium TX0133A] gi|314992843|ref|ZP_07858244.1| geranyltranstransferase [Enterococcus faecium TX0133B] gi|314998047|ref|ZP_07862935.1| geranyltranstransferase [Enterococcus faecium TX0133a01] gi|68196316|gb|EAN10745.1| Polyprenyl synthetase [Enterococcus faecium DO] gi|257813583|gb|EEV42341.1| polyprenyl synthetase [Enterococcus faecium 1,230,933] gi|257817437|gb|EEV44765.1| polyprenyl synthetase [Enterococcus faecium 1,231,502] gi|257826541|gb|EEV53167.1| polyprenyl synthetase [Enterococcus faecium 1,231,410] gi|257829888|gb|EEV56495.1| polyprenyl synthetase [Enterococcus faecium 1,231,408] gi|260075256|gb|EEW63569.1| polyprenyl synthetase [Enterococcus faecium C68] gi|260079217|gb|EEW66908.1| polyprenyl synthetase [Enterococcus faecium TC 6] gi|289162746|gb|EFD10597.1| polyprenyl synthetase [Enterococcus faecium D344SRF] gi|291589024|gb|EFF20848.1| geranyltranstransferase [Enterococcus faecium E1071] gi|291592462|gb|EFF24069.1| geranyltranstransferase [Enterococcus faecium E1636] gi|291594640|gb|EFF26022.1| geranyltranstransferase [Enterococcus faecium E1679] gi|291598756|gb|EFF29808.1| geranyltranstransferase [Enterococcus faecium U0317] gi|291602583|gb|EFF32798.1| geranyltranstransferase [Enterococcus faecium E1039] gi|291605634|gb|EFF35076.1| geranyltranstransferase [Enterococcus faecium E1162] gi|313587889|gb|EFR66734.1| geranyltranstransferase [Enterococcus faecium TX0133a01] gi|313592647|gb|EFR71492.1| geranyltranstransferase [Enterococcus faecium TX0133B] gi|313596543|gb|EFR75388.1| geranyltranstransferase [Enterococcus faecium TX0133A] gi|313599797|gb|EFR78640.1| geranyltranstransferase [Enterococcus faecium TX0133C] gi|313642741|gb|EFS07321.1| geranyltranstransferase [Enterococcus faecium TX0133a04] gi|313643574|gb|EFS08154.1| geranyltranstransferase [Enterococcus faecium TX0082] Length = 296 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 29 SHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLV-TECASLFNVNHLTALRVGAAIECIHCY 85 S + DR L A+ Y++ GGK+IR L+ T AS + +V AA+E +H Y Sbjct: 20 SFLDEHTTDRGLYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTY 79 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS L ++ + Sbjct: 80 SLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISM--AHLGNSPKLL 137 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ L G QGM+ GQ DI+ E + ++ I + KTG L+ +A +G I+A Sbjct: 138 LLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQP 197 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230 + L+ E+LG+ FQ+ DDLLD Sbjct: 198 EEILLLLQRLAEHLGLAFQIRDDLLDV 224 >gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987] gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97] gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187] gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26] gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987] gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97] gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187] gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26] Length = 296 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 136/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + L A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +G+I+++A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229 >gi|307611173|emb|CBX00817.1| hypothetical protein LPW_25211 [Legionella pneumophila 130b] Length = 298 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 117/199 (58%), Gaps = 14/199 (7%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 SA+ YAL GGK+IR LV L +V+ + AA+E HCYSLIHDDLP+MDN Sbjct: 33 SALHYALFSGGKRIRPILVYLAGDLIDVDQEVLDIIAAALELTHCYSLIHDDLPAMDNDD 92 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----G 155 +RRGKP+ H +DE TAI+ G+G+ A E++ +L + + ++++T + G Sbjct: 93 LRRGKPSCHKAFDEATAILVGDGMQALAIEVV---LMRLSPLLPAAQVVAITQVLVNASG 149 Query: 156 LQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERL 210 + GM+ GQ LD+ + + E Q+ I +KTG L+ AC + A S+ K L Sbjct: 150 ISGMVSGQSLDLSELAKSSVTEEQLRGIHLLKTGKLI-LACFEMVLAAQHEVSEQIKSAL 208 Query: 211 RCFGENLGIIFQLADDLLD 229 R +G+++G++FQ+ DD LD Sbjct: 209 RTYGKHIGLVFQMQDDYLD 227 >gi|229823205|ref|ZP_04449274.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271] gi|229787371|gb|EEP23485.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271] Length = 297 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 119/197 (60%), Gaps = 5/197 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSM 95 RL+ A+RY+L GGK++R ++ ++ + + + L+ A+E IH YSLIHDDLP+M Sbjct: 29 RLIEAMRYSLKNGGKRLRPVMLLAVLAIQSEDLVKCGLKTAIALEYIHTYSLIHDDLPAM 88 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRG+ T H ++ E AI+AG+ LLT AF+ + S L D + L+ L+ G Sbjct: 89 DNDDLRRGQATNHKRFGEGLAILAGDALLTDAFQFLVSDDL-LDDRTKLALIDQLSQASG 147 Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+ GQ+ DI+ E +D + I KTGAL FA E+GAI+ A + + LR F Sbjct: 148 SWGMVAGQVGDIEAEQTPVDYQGLKQIHDQKTGALFRFALEAGAIIGGADASTCQALRQF 207 Query: 214 GENLGIIFQLADDLLDC 230 G + G+ +Q+ +DL+D Sbjct: 208 GRHFGLAYQIHNDLMDV 224 >gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta] Length = 361 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/195 (37%), Positives = 114/195 (58%), Gaps = 3/195 (1%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ ++RY+LL GGK++R L L + LTA+ A+E IH SL+HDDLP MD Sbjct: 97 KIHESMRYSLLAGGKRVRPVLCIAACELVGGDGLTAMPAACAVEMIHTMSLMHDDLPCMD 156 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGKPT H+ Y E A++ G+ +L++AFE +++ + + + + L IG Sbjct: 157 NDDFRRGKPTNHMVYGEEIAVLGGDAMLSFAFEHMATATKGVSSDRILRAIGELAKCIGS 216 Query: 157 QGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +G++ GQ++DI E D + I KT AL+ + GAI+ S E E+LR F Sbjct: 217 EGLVAGQVVDICSEGADVGLEHLEFIHLHKTAALLEGSVVLGAILGGGSDGEIEKLRKFA 276 Query: 215 ENLGIIFQLADDLLD 229 ++G++FQ+ DD+LD Sbjct: 277 RSIGLLFQVVDDILD 291 >gi|86147429|ref|ZP_01065741.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222] gi|85834722|gb|EAQ52868.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222] Length = 294 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 114/204 (55%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N L++A+RY LL GGK+ R FLV + +AIECIH YSLIHDDLP Sbjct: 26 QNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPASAIECIHAYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTH 152 +MD+ +RRG T HI+YDE TAI+ G+ L T AF I++ ++ R +++ L Sbjct: 86 AMDDDELRRGHQTCHIKYDEATAILTGDALQTLAFTILAEGTLSADGESNRVRMIQRLAE 145 Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNE-KER 209 G QGM GQ LDI+ E T ++ + + KTGALM A GA+ A E + Sbjct: 146 ASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQ 205 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + + +G+ FQ+ DD+LD D Sbjct: 206 LDKYADAIGLAFQVQDDILDIISD 229 >gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita] gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita] gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita] Length = 377 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 117/203 (57%), Gaps = 4/203 (1%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 +Q + ++ ++RY+LL GGK++R L L + TA+ A+E IH SL+H Sbjct: 105 VQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMH 164 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP MDN +RRGKPT H+ + E A++AG+ LL++AFE +++ +++ Sbjct: 165 DDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGE 224 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L +IG +G++ GQ++D+ E + E + I KT AL+ + GAI+ + E Sbjct: 225 LAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEE 284 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 +LR F +G++FQ+ DD+LD Sbjct: 285 VAKLRKFANCIGLLFQVVDDILD 307 >gi|307265160|ref|ZP_07546719.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919782|gb|EFN49997.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 294 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 12/209 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + A+RY++ GGK++R L L + AL V AIE IH YSLIHDDLP+MDN Sbjct: 30 IYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAMDN 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--- 154 +RRGKPT H Y E AI+AG+GLL +E++ + ++ + +L T+ I Sbjct: 90 DDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDY--ERILKATNEIATA 147 Query: 155 -GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G +G++GGQ++DI Q+ + ++ + + KTGAL+ + +GA +A A++ E LR Sbjct: 148 SGCKGIIGGQVVDILSQNTELTYEELKFMHEHKTGALIEASVCAGAYIASATEEEIHALR 207 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 + +G FQ+ DD+LD EE L KK Sbjct: 208 EYARLIGFAFQIKDDILDVIGEEEKLGKK 236 >gi|16763803|ref|NP_459418.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414422|ref|YP_151497.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161615389|ref|YP_001589354.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551766|ref|ZP_02345519.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992273|ref|ZP_02573371.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232396|ref|ZP_02657454.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237536|ref|ZP_02662594.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168261144|ref|ZP_02683117.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465513|ref|ZP_02699395.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194471326|ref|ZP_03077310.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737792|ref|YP_002113456.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248755|ref|YP_002145405.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264786|ref|ZP_03164860.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363342|ref|YP_002142979.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198246235|ref|YP_002214377.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204927283|ref|ZP_03218485.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|224582261|ref|YP_002636059.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911444|ref|ZP_04655281.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16418928|gb|AAL19377.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128679|gb|AAV78185.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161364753|gb|ABX68521.1| hypothetical protein SPAB_03160 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194457690|gb|EDX46529.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713294|gb|ACF92515.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631861|gb|EDX50381.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094819|emb|CAR60352.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212458|gb|ACH49855.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243041|gb|EDY25661.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289586|gb|EDY28949.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940751|gb|ACH78084.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204323948|gb|EDZ09143.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323424|gb|EDZ11263.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329490|gb|EDZ16254.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333490|gb|EDZ20254.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205349921|gb|EDZ36552.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224466788|gb|ACN44618.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245706|emb|CBG23502.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992135|gb|ACY87020.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157034|emb|CBW16517.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911456|dbj|BAJ35430.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225151|gb|EFX50212.1| Geranyltranstransferase farnesyldiphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322614703|gb|EFY11632.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618809|gb|EFY15697.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623516|gb|EFY20355.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629186|gb|EFY25965.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631906|gb|EFY28660.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637357|gb|EFY34059.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642042|gb|EFY38652.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647861|gb|EFY44336.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652539|gb|EFY48893.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653299|gb|EFY49632.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660552|gb|EFY56788.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664704|gb|EFY60897.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669243|gb|EFY65393.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670788|gb|EFY66921.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678973|gb|EFY75028.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682001|gb|EFY78026.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685170|gb|EFY81167.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323128742|gb|ADX16172.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194482|gb|EFZ79677.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196981|gb|EFZ82123.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203966|gb|EFZ88983.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206949|gb|EFZ91902.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210833|gb|EFZ95705.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214524|gb|EFZ99275.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223081|gb|EGA07424.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227030|gb|EGA11211.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230152|gb|EGA14272.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233890|gb|EGA17979.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238416|gb|EGA22474.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244104|gb|EGA28113.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246264|gb|EGA30247.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251890|gb|EGA35753.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257887|gb|EGA41566.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261100|gb|EGA44692.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264970|gb|EGA48469.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272533|gb|EGA55940.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622125|gb|EGE28470.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332987371|gb|AEF06354.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 299 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT HI++ E AI+AG+ L T AF IIS +P ++ D R ++ L + Sbjct: 88 AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVADRDRIAMIAELAN 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E I + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDRYAESIGLAFQVQDDILDVVGD 231 >gi|257885167|ref|ZP_05664820.1| polyprenyl synthetase [Enterococcus faecium 1,231,501] gi|257821019|gb|EEV48153.1| polyprenyl synthetase [Enterococcus faecium 1,231,501] Length = 296 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 29 SHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLV-TECASLFNVNHLTALRVGAAIECIHCY 85 S + DR L A+ Y++ GGK+IR L+ T AS + +V AA+E +H Y Sbjct: 20 SFLDEHTTDRGLYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTY 79 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS L ++ + Sbjct: 80 SLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISM--AHLGNSPKLL 137 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ L G QGM+ GQ DI+ E + ++ I + KTG L+ +A +G I+A Sbjct: 138 LLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQP 197 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230 + L+ E+LG+ FQ+ DDLLD Sbjct: 198 EEIILLLQRLAEHLGLAFQIRDDLLDV 224 >gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 300 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 117/202 (57%), Gaps = 3/202 (1%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 + ++ + L ++RY+LL GGK+IR L SL A+ AIE IH SLIH Sbjct: 30 LGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIH 89 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP+MDN RRG+PT H Y + AI+AG+ LLT AFE++S + N ++ Sbjct: 90 DDLPAMDNDGFRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDSNRLLNVVGE 149 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L+ G G++GGQ++D++ E +D + I KTGAL+ + +GA++A A++ Sbjct: 150 LSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKASVRTGAMIAGANEELL 209 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 L + E +G+ FQ+ DD+LD Sbjct: 210 NALTTYAEGIGLAFQIIDDILD 231 >gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza] Length = 364 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/245 (32%), Positives = 127/245 (51%), Gaps = 19/245 (7%) Query: 4 GLPSKLQENSKRIDTILDD-------LLLQTASHMQTQHNDRLL--------SAIRYALL 48 G+ + L R+ T DD +++ A+H+ +D + A+RY+LL Sbjct: 50 GVSAVLTGEEARVSTQRDDAPFNFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLL 109 Query: 49 -GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L + A+ A+E IH SLIHDDLP MDN +RRGKPT Sbjct: 110 AGGKRVRPMLCIAACEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 169 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H + E A++AG+ LL +AFE +++ T + + L IG +G++ GQ++D+ Sbjct: 170 HKVFGEDVAVLAGDALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDL 229 Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D + + I KT AL+ + GAI+ S ++ E+LR F +G++FQ+ Sbjct: 230 NCTGDANVGLDTLEFIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLFQVV 289 Query: 225 DDLLD 229 DD+LD Sbjct: 290 DDILD 294 >gi|81428294|ref|YP_395294.1| farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei 23K] gi|78609936|emb|CAI54983.1| Farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei 23K] Length = 290 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/196 (39%), Positives = 112/196 (57%), Gaps = 6/196 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L ++ Y+++ GGK++R L+ S TA R A+E IH YSLIHDDLP+MD Sbjct: 31 LQKSMTYSVMAGGKRLRPLLLFAVLESTGQSIDETAFRAAGALELIHSYSLIHDDLPAMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PT H + E AI+AG+GLLT AFE +++ + I +L+ L G Sbjct: 91 NDDLRRGQPTNHKVFGEAEAILAGDGLLTLAFEWLATLNVTAEQRI--ELVRLLAQAAGA 148 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+ GQ+ DI+ E T Q+ + +KTG L+ A GA++A + E LR F Sbjct: 149 NGMVAGQIEDIEGEHKTLTLAQLQQVHHLKTGCLIEVAVAMGAVLAQLGEVETTALRGFA 208 Query: 215 ENLGIIFQLADDLLDC 230 + G+ FQ+ DD+LD Sbjct: 209 QQFGLAFQIQDDILDV 224 >gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 371 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/196 (39%), Positives = 114/196 (58%), Gaps = 8/196 (4%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+LL GGK++R L L TA+ A+E IH SLIHDDLP MDN + Sbjct: 106 AMSYSLLAGGKRVRPVLCIAACELVGGEESTAMPARCAVEMIHTMSLIHDDLPCMDNDDL 165 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQLMLSLTHNIGLQG 158 RRGKPT H + E A++AG+ LL+++FE + S+ + + +R + + L IG +G Sbjct: 166 RRGKPTNHKVFGEDVAVLAGDALLSFSFEHLASATSSDVVSPVRVVRAVGELAKAIGTEG 225 Query: 159 MLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 ++ GQ++DI E +D V + I KT AL+ + GAI+ S +E ERLR F Sbjct: 226 LVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKF 285 Query: 214 GENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 286 ARCIGLLFQVVDDILD 301 >gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 296 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 85/224 (37%), Positives = 134/224 (59%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANGLQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D+ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMDAEGKRLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229 >gi|168240246|ref|ZP_02665178.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194445849|ref|YP_002039665.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450485|ref|YP_002044458.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|200390075|ref|ZP_03216686.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194404512|gb|ACF64734.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408789|gb|ACF69008.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|199602520|gb|EDZ01066.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205339956|gb|EDZ26720.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 299 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT HI++ E AI+AG+ L T AF IIS +P ++ D R ++ L + Sbjct: 88 AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVTDRDRIAMIAELAN 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E I + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDRYAESIGLAFQVQDDILDVVGD 231 >gi|168818966|ref|ZP_02830966.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344074|gb|EDZ30838.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084699|emb|CBY94490.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 299 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT HI++ E AI+AG+ L T AF IIS +P ++ D R ++ L + Sbjct: 88 AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVADRDRIAMIAELAN 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E I + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDHYAESIGLAFQVQDDILDVVGD 231 >gi|16759400|ref|NP_455017.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142828|ref|NP_806170.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052895|ref|ZP_03345773.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427858|ref|ZP_03360608.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213586122|ref|ZP_03367948.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213613222|ref|ZP_03371048.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647259|ref|ZP_03377312.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855375|ref|ZP_03383615.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825066|ref|ZP_06544418.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25315864|pir||AG0554 geranyltranstransferase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501691|emb|CAD08879.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi] gi|29138460|gb|AAO70030.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 299 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT HI++ E AI+AG+ L T AF IIS +P ++ D R ++ L + Sbjct: 88 AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELAN 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E I + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDRYAESIGLAFQVQDDILDVVGD 231 >gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ipp gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ipp gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (I) gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (I) gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (Ii) gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (Ii) gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands Length = 295 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 117/203 (57%), Gaps = 4/203 (1%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 +Q + ++ ++RY+LL GGK++R L L + TA+ A+E IH SL+H Sbjct: 23 VQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMH 82 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP MDN +RRGKPT H+ + E A++AG+ LL++AFE +++ +++ Sbjct: 83 DDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGE 142 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L +IG +G++ GQ++D+ E + E + I KT AL+ + GAI+ + E Sbjct: 143 LAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEE 202 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 +LR F +G++FQ+ DD+LD Sbjct: 203 VAKLRKFANCIGLLFQVVDDILD 225 >gi|307720223|ref|YP_003891363.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM 16294] gi|306978316|gb|ADN08351.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM 16294] Length = 283 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 6/185 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R L+ +N L + R A A+E +H YSLIHDDLP+MD+ +RRGKPT+ Sbjct: 33 GGKRFRPALLLGVVKAYNPLMLESARHAALAVEFLHTYSLIHDDLPAMDDSPLRRGKPTL 92 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H+ +DEVTAI+ G+ L TY+FE++++ D R +L+ L N GL GM+ GQ +D Sbjct: 93 HVSFDEVTAILVGDALNTYSFEVLAN--APFSDETRVKLIRELASNGGLNGMVLGQAIDC 150 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +++ + + + KT L+ + + GA++ + ++L FG LG++FQ+ D Sbjct: 151 YFENKPLAVEDIKTLHTNKTAKLIAASLKMGALIV-GRDDAADKLYDFGIKLGLLFQIQD 209 Query: 226 DLLDC 230 D+LD Sbjct: 210 DILDV 214 >gi|229916250|ref|YP_002884896.1| polyprenyl synthetase [Exiguobacterium sp. AT1b] gi|229467679|gb|ACQ69451.1| Polyprenyl synthetase [Exiguobacterium sp. AT1b] Length = 292 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 13/209 (6%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+ Y+L GGK+IR LV + ++ V A++E +H YSLIHDDLP+MD Sbjct: 30 RLRDAMAYSLEAGGKRIRPALVYAVLETYGMSLERGREVAASLEMVHTYSLIHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PT H Q+DE TAI+AG+ LLT AF I++ D + + L G Sbjct: 90 DDDLRRGRPTNHRQFDEATAILAGDALLTDAFRILTQMPLSALDIVEIIRIFGLA--AGS 147 Query: 157 QGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GM+GGQ+ D+ D ++E Q I + KTGAL+ +A E+GAI+A AS ++ L+ Sbjct: 148 SGMVGGQLDDMLAEKRNDVTLEELQS--IHERKTGALLVYALEAGAILAGASVEDRMHLK 205 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 FG +LGI FQ+ DD+LD EE + K+ Sbjct: 206 QFGRHLGIAFQIQDDILDVVGDEETIGKR 234 >gi|255022132|ref|ZP_05294135.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756] gi|254968396|gb|EET25955.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756] Length = 304 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 14/227 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68 Q +RI+ +LD+LL A + RL A+RY+ LGG K++R LV + Sbjct: 15 QRRVERIEKVLDELL-PPADILPG----RLHEAMRYSTLGGGKRVRPLLVYAGGQCLGLA 69 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 R AA+E IH YSL+HDDLP+MDN +RRG+PT H +DE TAI+ G+ LLT+AF Sbjct: 70 DELLDRAAAALEMIHAYSLVHDDLPAMDNDDMRRGRPTCHKAFDEATAILVGDALLTHAF 129 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTG 186 ++++ P L + + L L G +GM+GGQ +D+ + Q + Q KTG Sbjct: 130 QVLAEPVPGLAPAQQLAMALDLARAAGSRGMVGGQAIDLAAVGHELAQPALEQMHLQKTG 189 Query: 187 ALM-C---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ C ++ AI AS L + + +G+ FQ+ DD+LD Sbjct: 190 MLIRCALQLPLQAAAIAPDASVASA--LLRYADRIGLAFQVQDDILD 234 >gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha haplocalyx var. piperascens] Length = 377 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 118/203 (58%), Gaps = 4/203 (1%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 +Q + ++ ++RY+LL GGK++R L L + TA+ A+E IH SL+H Sbjct: 105 VQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMH 164 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP MDN +RRGKPT H+ + E A++AG+ LL++AFE +++ +++ Sbjct: 165 DDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGE 224 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L ++G +G++ GQ++D+ E + E + I KT AL+ + GAI+ ++ E Sbjct: 225 LAVSVGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGNEEE 284 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 +LR F +G++FQ+ DD+LD Sbjct: 285 VAKLRKFANCIGLLFQVVDDILD 307 >gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 296 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 136/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + L A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +G+I+++A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229 >gi|28378303|ref|NP_785195.1| geranyltranstransferase [Lactobacillus plantarum WCFS1] gi|254556510|ref|YP_003062927.1| geranyltranstransferase [Lactobacillus plantarum JDM1] gi|28271138|emb|CAD64043.1| geranyltranstransferase [Lactobacillus plantarum WCFS1] gi|254045437|gb|ACT62230.1| geranyltranstransferase [Lactobacillus plantarum JDM1] Length = 296 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 113/196 (57%), Gaps = 6/196 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L A+RY++L GGK++R L F++ A LR A+E +H YSLIHDDLP+MD Sbjct: 34 LTDAMRYSVLAGGKRLRPLLTLAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PT H+++ E AI+AG+ L FE I+ + L +I + L+L G Sbjct: 94 NDQLRRGEPTNHVKFGEDVAILAGDALQPLTFEWIAD--SGLPASIVANQTLALAQATGP 151 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM+ GQ+ D+ + + + + + KTGAL+ +A ++G I A +E L + Sbjct: 152 RGMVAGQVADVLGAGQHLALPALQQLHREKTGALIHYAVQAGLIQAQVQPTVQELLLQYA 211 Query: 215 ENLGIIFQLADDLLDC 230 + G+ FQ+ DD+LD Sbjct: 212 DAYGLAFQIYDDILDV 227 >gi|62959187|gb|AAY23701.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-316] Length = 145 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 94/145 (64%), Gaps = 2/145 (1%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+P MD+ +R GKPT+H +DE TA++AG+ L AF+I++ P T +R++L+ Sbjct: 1 HDDMPGMDDDEMRHGKPTLHKAFDEATAVLAGDSLHALAFDILTQPDTSTDPFVRAELVA 60 Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 +L G GM GGQM+DI +++ D QV +Q++KTGAL+ + E GA++ + Sbjct: 61 TLARASGHDGMAGGQMMDIVSEEQSYDLRQVTRLQQLKTGALLAASVEMGAVLGRVAPEG 120 Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231 + LR + ++G+ FQ+ADD+LD E Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145 >gi|161504393|ref|YP_001571505.1| geranyltranstransferase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865740|gb|ABX22363.1| hypothetical protein SARI_02504 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 299 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDVPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT HI++ E AI+AG+ L T AF IIS +P ++ D R ++ L + Sbjct: 88 AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVADRDRIAMIAELAN 147 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E I + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLAAEGHQISLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDRYAESIGLAFQVQDDILDVVGD 231 >gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115928|ref|YP_004186087.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200] gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 294 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 12/209 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + A+RY++ GGK++R L L + AL V AIE IH YSLIHDDLP+MDN Sbjct: 30 IYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAMDN 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--- 154 +RRGKPT H Y E AI+AG+GLL +E++ + ++ + +L T+ I Sbjct: 90 DDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDY--ERILKATNEIATA 147 Query: 155 -GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G +G++GGQ++DI Q+ + ++ + + KTGAL+ + +GA +A A++ E LR Sbjct: 148 SGCKGIIGGQVVDILSQNTELTYEELKFMHEHKTGALIEASVCAGAYIAGATEEEIHALR 207 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 + +G FQ+ DD+LD EE L KK Sbjct: 208 EYARLIGFAFQIKDDILDVIGEEEKLGKK 236 >gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515] gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515] Length = 300 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/224 (36%), Positives = 125/224 (55%), Gaps = 10/224 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+E K ++ LD + ++ + L ++RY+LL GGK+IR L SL Sbjct: 15 LKETKKIVEEALD-------LSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGG 67 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ LLT A Sbjct: 68 EPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRA 127 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S + N ++ L+ G G++GGQ++D++ E +D + I KT Sbjct: 128 FEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKT 187 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GAL+ +GA++A A+ + L + E +G+ FQ+ DD+LD Sbjct: 188 GALLKACVRTGAMIAGANDELLKALTTYAEGIGLAFQIIDDILD 231 >gi|270157822|ref|ZP_06186479.1| geranyltranstransferase [Legionella longbeachae D-4968] gi|289163911|ref|YP_003454049.1| geranyltranstransferase [Legionella longbeachae NSW150] gi|269989847|gb|EEZ96101.1| geranyltranstransferase [Legionella longbeachae D-4968] gi|288857084|emb|CBJ10899.1| geranyltranstransferase [Legionella longbeachae NSW150] Length = 293 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/195 (38%), Positives = 112/195 (57%), Gaps = 7/195 (3%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 SAI Y+L GGK+IR LV SL +V+ + AA+E HCYSLIHDDLP+MDN Sbjct: 29 SAIDYSLFPGGKRIRPILVYLTGSLLDVDLNILDAIAAAVELTHCYSLIHDDLPAMDNDD 88 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+P+ H +DE TAI+AG+G+ A +++ + P D I S + L G+ Sbjct: 89 LRRGRPSCHKAFDEATAILAGDGMQALAIDVLLTYLPHLVQPDRIIS-ITRELVQATGIS 147 Query: 158 GMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+ GQ LD+ + ID+ ++ I +KTG L+ E + + + LR + Sbjct: 148 GMVSGQSLDLSELAKSSIDDERLKEIHHLKTGRLILACIEMVLRIQSTPEAYQSALRTYA 207 Query: 215 ENLGIIFQLADDLLD 229 ++G++FQ+ DD LD Sbjct: 208 NHIGLVFQMQDDYLD 222 >gi|52842540|ref|YP_096339.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629651|gb|AAU28392.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 309 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 117/199 (58%), Gaps = 14/199 (7%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 SA+ YAL GGK+IR LV L +V+ + AA+E HCYSLIHDDLP+MDN Sbjct: 44 SALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMDNDD 103 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----G 155 +RRGKP+ H +DE TAI+ G+G+ A E++ +L + + ++++T + G Sbjct: 104 LRRGKPSCHKAFDEATAILVGDGMQALAIEVL---LMRLSPLLPAAQVVAITQVLVNASG 160 Query: 156 LQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERL 210 + GM+ GQ LD+ + + E Q+ I +KTG L+ AC + A S+ K L Sbjct: 161 ISGMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLI-LACFEMVLAAQHEVSEQIKSAL 219 Query: 211 RCFGENLGIIFQLADDLLD 229 R +G+++G++FQ+ DD LD Sbjct: 220 RTYGKHIGLVFQMQDDYLD 238 >gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98] Length = 297 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/197 (40%), Positives = 121/197 (61%), Gaps = 4/197 (2%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ Y+L GGK++R L+ F + A+E IH YSLIHDDLP MD+ Sbjct: 34 LRDAMTYSLEAGGKRLRPLLLFATLHAFGKERELGIGAACALEMIHTYSLIHDDLPCMDD 93 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156 +RRGKPT H + E A++AG+GLLTYAF+++S+ + + I+ +L L L G Sbjct: 94 DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVVSAYNYEGISSEIKLRLALELAKAAGP 153 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM+ GQ+ D++ E + ++ I K KTG L+ FA +GAI+A A++ E+E+L F Sbjct: 154 EGMVAGQVADMEAEGKHLTLNELEYIHKHKTGRLLEFAVLAGAILAGATKEEEEKLLAFA 213 Query: 215 ENLGIIFQLADDLLDCE 231 + +G+ FQ+ DD+LD E Sbjct: 214 KYVGLAFQIRDDILDVE 230 >gi|288965921|pdb|3LOM|A Chain A, Crystal Structure Of Geranyltransferase From Legionella Pneumophila gi|288965922|pdb|3LOM|B Chain B, Crystal Structure Of Geranyltransferase From Legionella Pneumophila Length = 313 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 117/199 (58%), Gaps = 14/199 (7%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 SA+ YAL GGK+IR LV L +V+ + AA+E HCYSLIHDDLP+MDN Sbjct: 40 SALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMDNDD 99 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----G 155 +RRGKP+ H +DE TAI+ G+G+ A E++ +L + + ++++T + G Sbjct: 100 LRRGKPSCHKAFDEATAILVGDGMQALAIEVL---LMRLSPLLPAAQVVAITQVLVNASG 156 Query: 156 LQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERL 210 + GM+ GQ LD+ + + E Q+ I +KTG L+ AC + A S+ K L Sbjct: 157 ISGMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLI-LACFEMVLAAQHEVSEQIKSAL 215 Query: 211 RCFGENLGIIFQLADDLLD 229 R +G+++G++FQ+ DD LD Sbjct: 216 RTYGKHIGLVFQMQDDYLD 234 >gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442] gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B] gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442] Length = 296 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 136/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F+ Sbjct: 10 KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFDKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 133 SPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYRQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229 >gi|77165502|ref|YP_344027.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707] gi|254434894|ref|ZP_05048402.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] gi|76883816|gb|ABA58497.1| farnesyl-diphosphate synthase [Nitrosococcus oceani ATCC 19707] gi|207091227|gb|EDZ68498.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] Length = 296 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 111/200 (55%), Gaps = 4/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+LGG K++R L V+ +A+E IH YSL+HDDLPSMD Sbjct: 32 RLHEAMRYAVLGGGKRLRPLLTYSAGIALGVSEAVLDAPASAVELIHAYSLVHDDLPSMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG PT H + E TA++AG+ L AF ++ P + + + ++ L G Sbjct: 92 NDSLRRGHPTCHKAFGETTALLAGDALQALAFRTLAEPTSAIPAKNQINMLELLAEAAGS 151 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAI-MAHASQNEKERLRCF 213 +GM GGQ +D+ + T ++ + ++KTGAL+ + GA +Q+ E L F Sbjct: 152 RGMAGGQAIDLDSVGVQLTLSEMETMHRLKTGALIRASVLLGAWCHPEITQDTLENLDRF 211 Query: 214 GENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD E D Sbjct: 212 AQCIGLAFQIQDDVLDVESD 231 >gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212] gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212] Length = 297 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 117/205 (57%), Gaps = 16/205 (7%) Query: 37 DRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RL A+RY++LGG K++R L L + V AA+E IH YSL+HDDLP M Sbjct: 32 ERLHKAMRYSVLGGGKRVRPLLSFAAGELVAADLERVTVVAAAVELIHAYSLVHDDLPCM 91 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS------PKTQLKDNIRSQLMLS 149 D+ +RRGKPT H++YDE TA++ G+ L T AFE+++ P+TQL Q++ Sbjct: 92 DDDILRRGKPTCHVEYDEATALLTGDSLQTLAFELLAEKPLADIPETQL------QMIAQ 145 Query: 150 LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G +GM GGQ D+ + + ++ + KTGAL+ A GA + +E+ Sbjct: 146 LALASGSRGMAGGQAFDLDSVGKMLSLPELEFMHIHKTGALIRAAVMLGARCSSCLNDEQ 205 Query: 208 -ERLRCFGENLGIIFQLADDLLDCE 231 +L F + +G+ FQ+ DDLLD E Sbjct: 206 LAQLDHFAKCVGLAFQVVDDLLDTE 230 >gi|196041614|ref|ZP_03108906.1| geranyltranstransferase [Bacillus cereus NVH0597-99] gi|229093237|ref|ZP_04224355.1| Geranyltranstransferase [Bacillus cereus Rock3-42] gi|196027602|gb|EDX66217.1| geranyltranstransferase [Bacillus cereus NVH0597-99] gi|228690211|gb|EEL44005.1| Geranyltranstransferase [Bacillus cereus Rock3-42] Length = 296 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 136/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F+ Sbjct: 10 KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFDKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKKLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229 >gi|319957682|ref|YP_004168945.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511] gi|319420086|gb|ADV47196.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511] Length = 294 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 122/216 (56%), Gaps = 9/216 (4%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL---VTECASLFNVNHLTALRVG 76 ++ L Q + T H D + L GGK+ R L + E + V +A+ Sbjct: 4 FENFLTQNLPVVDTFHPDYNEALRAMVLAGGKRFRPRLLLGIVEAYAPLLVE--SAMTPA 61 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E H YSLIHDDLP+MD+ +RRG+PT+H ++DE AI+AG+ L T+AFE++S ++ Sbjct: 62 LALEIFHTYSLIHDDLPAMDDADLRRGEPTLHTRFDEALAILAGDALNTHAFEMLS--RS 119 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACE 194 + ++R +L+ L N G GM+ GQ +D++ E + QV + KT L+ A E Sbjct: 120 AFRADVRIELVRILAENGGSGGMVLGQAIDLEFEKSPLSLEQVVELHTNKTAKLIAAALE 179 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 GA++ + + L FG +LG++FQ+ DD+LD Sbjct: 180 MGAVIVDLPKETRRALYRFGIDLGLLFQVQDDILDA 215 >gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425] gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425] Length = 320 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 11/229 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L S L+E + +D L+ + + +++ A+RY+L+ GGK++R L Sbjct: 30 LVSYLKERQQWVDAALE-------QSISVTYPEKIYQAMRYSLMAGGKRLRPILCLATCE 82 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+GL Sbjct: 83 MTGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGL 142 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MI 180 L YAFE ++ + +++ L H + G++GGQ++D++ E + + V I Sbjct: 143 LAYAFEYVAVKTQGVPAEWLLKVVARLGHAVAATGLVGGQVVDLECEGVKDVSVETLNFI 202 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ + GA + AS ++L + N+G+ FQ+ DD+LD Sbjct: 203 HAHKTGALLEASVLCGAYLTGASDEVLQKLSRYARNVGLAFQIIDDVLD 251 >gi|30264253|ref|NP_846630.1| geranyltranstransferase [Bacillus anthracis str. Ames] gi|47529696|ref|YP_021045.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187080|ref|YP_030332.1| geranyltranstransferase [Bacillus anthracis str. Sterne] gi|49478571|ref|YP_038239.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141318|ref|YP_085511.1| geranyltranstransferase [Bacillus cereus E33L] gi|65321563|ref|ZP_00394522.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis str. A2012] gi|118479369|ref|YP_896520.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al Hakam] gi|165872980|ref|ZP_02217602.1| geranyltranstransferase [Bacillus anthracis str. A0488] gi|167638604|ref|ZP_02396880.1| geranyltranstransferase [Bacillus anthracis str. A0193] gi|170687399|ref|ZP_02878616.1| geranyltranstransferase [Bacillus anthracis str. A0465] gi|170709043|ref|ZP_02899473.1| geranyltranstransferase [Bacillus anthracis str. A0389] gi|177654844|ref|ZP_02936601.1| geranyltranstransferase [Bacillus anthracis str. A0174] gi|190565928|ref|ZP_03018847.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I] gi|196034877|ref|ZP_03102284.1| geranyltranstransferase [Bacillus cereus W] gi|196046422|ref|ZP_03113648.1| geranyltranstransferase [Bacillus cereus 03BB108] gi|218905314|ref|YP_002453148.1| geranyltranstransferase [Bacillus cereus AH820] gi|225866160|ref|YP_002751538.1| geranyltranstransferase [Bacillus cereus 03BB102] gi|227816954|ref|YP_002816963.1| geranyltranstransferase [Bacillus anthracis str. CDC 684] gi|228916814|ref|ZP_04080379.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929224|ref|ZP_04092251.1| Geranyltranstransferase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228947895|ref|ZP_04110182.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229186421|ref|ZP_04313585.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1] gi|229601140|ref|YP_002868472.1| geranyltranstransferase [Bacillus anthracis str. A0248] gi|254683942|ref|ZP_05147802.1| geranyltranstransferase [Bacillus anthracis str. CNEVA-9066] gi|254721777|ref|ZP_05183566.1| geranyltranstransferase [Bacillus anthracis str. A1055] gi|254736290|ref|ZP_05193996.1| geranyltranstransferase [Bacillus anthracis str. Western North America USA6153] gi|254754038|ref|ZP_05206073.1| geranyltranstransferase [Bacillus anthracis str. Vollum] gi|254757909|ref|ZP_05209936.1| geranyltranstransferase [Bacillus anthracis str. Australia 94] gi|301055671|ref|YP_003793882.1| geranyltranstransferase [Bacillus anthracis CI] gi|30258898|gb|AAP28116.1| geranyltranstransferase [Bacillus anthracis str. Ames] gi|47504844|gb|AAT33520.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181007|gb|AAT56383.1| geranyltranstransferase [Bacillus anthracis str. Sterne] gi|49330127|gb|AAT60773.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974787|gb|AAU16337.1| geranyltranstransferase [Bacillus cereus E33L] gi|118418594|gb|ABK87013.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al Hakam] gi|164711263|gb|EDR16818.1| geranyltranstransferase [Bacillus anthracis str. A0488] gi|167513452|gb|EDR88822.1| geranyltranstransferase [Bacillus anthracis str. A0193] gi|170126070|gb|EDS94967.1| geranyltranstransferase [Bacillus anthracis str. A0389] gi|170668594|gb|EDT19340.1| geranyltranstransferase [Bacillus anthracis str. A0465] gi|172080505|gb|EDT65591.1| geranyltranstransferase [Bacillus anthracis str. A0174] gi|190562847|gb|EDV16813.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I] gi|195992416|gb|EDX56377.1| geranyltranstransferase [Bacillus cereus W] gi|196022892|gb|EDX61573.1| geranyltranstransferase [Bacillus cereus 03BB108] gi|218538297|gb|ACK90695.1| geranyltranstransferase [Bacillus cereus AH820] gi|225790308|gb|ACO30525.1| geranyltranstransferase [Bacillus cereus 03BB102] gi|227007089|gb|ACP16832.1| geranyltranstransferase [Bacillus anthracis str. CDC 684] gi|228597048|gb|EEK54704.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1] gi|228811882|gb|EEM58216.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830514|gb|EEM76124.1| Geranyltranstransferase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843001|gb|EEM88084.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265548|gb|ACQ47185.1| geranyltranstransferase [Bacillus anthracis str. A0248] gi|300377840|gb|ADK06744.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI] Length = 296 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 136/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F+ Sbjct: 10 KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFDKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229 >gi|89073140|ref|ZP_01159679.1| putative geranyltranstransferase [Photobacterium sp. SKA34] gi|89051093|gb|EAR56550.1| putative geranyltranstransferase [Photobacterium sp. SKA34] Length = 300 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 114/204 (55%), Gaps = 13/204 (6%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL A++Y LLGGK+ R FL + + AA+ECIH YSLIHDDLP+MD+ Sbjct: 36 LLKAMQYGTLLGGKRARPFLTYVTGEMLGLTQDDLDTPAAAVECIHAYSLIHDDLPAMDD 95 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156 RRG+PT HI +DE AI+AG+ L T AF+I++S + N + M+S L G Sbjct: 96 DAFRRGQPTCHIAFDEAMAILAGDALQTLAFDILASGQLSQDGNTQRIAMVSELAKASGA 155 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-----ER 209 GM GQ LD+ E + Q+ +I + KTGAL+ A GA+ A +K + Sbjct: 156 AGMCLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAA----GDKGVAILPQ 211 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E +G+ FQ+ DD+LD D Sbjct: 212 LDKYSEAIGLAFQVQDDILDVISD 235 >gi|259417470|ref|ZP_05741389.1| geranyltranstransferase [Silicibacter sp. TrichCH4B] gi|259346376|gb|EEW58190.1| geranyltranstransferase [Silicibacter sp. TrichCH4B] Length = 287 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/237 (39%), Positives = 137/237 (57%), Gaps = 19/237 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M G + L + +I ++ L QT D L A+ YAL GGK +R FLV E Sbjct: 1 MTAGFTAALSQAQAKISIHMEHRLPQT---------DLLHQAMLYALRGGKMLRGFLVLE 51 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A L +V AL AIECIH YSL+HDDLP MD+ +RRG+PT+H ++DE TA++AG Sbjct: 52 SARLHDVPETAALEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTLHRKWDEATAVLAG 111 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----Q 176 + L T AFE+++ + ++ + S L+ ++ G GM+ GQMLDI E + Q Sbjct: 112 DSLQTLAFELLA--REEVGPHAIS-LIRTMAEAAGKDGMVSGQMLDIAAETAEAPLTLEQ 168 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + +Q KTG L+ ++ +GA +A A + LR + + LG+ FQ+ADD+LD E D Sbjct: 169 ITTLQARKTGCLIEWSACAGARLAGA---DPAPLRHYAQALGLAFQIADDILDIEGD 222 >gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241] gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342] gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241] gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342] gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 296 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + L A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229 >gi|317484629|ref|ZP_07943532.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6] gi|316924103|gb|EFV45286.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6] Length = 302 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 89/233 (38%), Positives = 139/233 (59%), Gaps = 13/233 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQ-----TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 +S+++ TIL + Q +++Q RL A+ Y+LL GGK++R L A+LF Sbjct: 6 DSQQVKTILAERGAQVEAYLQHCLDAIPMQGRLKEAMYYSLLAGGKRLRPVLCLSTAALF 65 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 ++ + A++E IH YSLIHDDLP+MD+ +RRG+P+ H +DE TAI+AG+ LLT Sbjct: 66 GLSAEAVMPFAASLEMIHTYSLIHDDLPAMDDDDLRRGRPSCHKAFDEATAILAGDALLT 125 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----I 180 AF ++S L + + S++ G GM+GGQ+LD+ + +T V + + Sbjct: 126 DAFGFMASTVKDLPAGRVLEALASVSSAAGSAGMVGGQILDM--DCTGKTNVPLETLQTL 183 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +KTGA+ AC SG ++A AS+++ LR +GE LG+ FQ+ DD+LD D Sbjct: 184 HALKTGAMFRVACVSGGLLAGASESDIASLRAYGEALGVTFQIVDDILDETAD 236 >gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701] gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701] Length = 300 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 116/205 (56%), Gaps = 3/205 (1%) Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + + + + L A+RY+LL GGK++R L L AL A+E IH SL Sbjct: 28 AALGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGEVALALPTAVALEMIHTMSL 87 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLP+MDN +RRG+PT H Y + AI+AG+ LLT AFE+++ + Q++ Sbjct: 88 IHDDLPAMDNDDLRRGRPTNHKVYGDAQAILAGDALLTRAFEMVALRSPGVPAERLLQVV 147 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 L+ G G++GGQ++D++ E +D + I KTGAL+ +GA++A A + Sbjct: 148 GELSLAAGAPGLVGGQVVDLESEGKDVDLATLEYIHLHKTGALLQACVLTGAMIAGAPEP 207 Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230 + LR + +G+ FQ+ DD+LD Sbjct: 208 LLQGLRTYSRGIGLAFQIIDDILDV 232 >gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073] gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073] Length = 297 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 109/197 (55%), Gaps = 5/197 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+L GGK++R LV L A+E IH YSLIHDDLP+MDN Sbjct: 38 AMHYSLFAGGKRLRPILVLAAGEAVGSQPEPLLPAACAVEFIHTYSLIHDDLPAMDNDDY 97 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRG+PT H Y E A++AG+ LLT AFE++S P T + I + L + G QG+ Sbjct: 98 RRGRPTCHKVYGEAIALLAGDALLTLAFEVLSRIPATIPPERIL-RATRELAASAGSQGL 156 Query: 160 LGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 +GGQ++D++ E T +V I KTG+L+ G I+ A + + L +GE L Sbjct: 157 IGGQVVDMEAEGQPVTLEKVNYIHNHKTGSLIRACLRLGGILGGAGEEQLALLTRYGEAL 216 Query: 218 GIIFQLADDLLDCEEDL 234 G+ FQ+ DD+LD D Sbjct: 217 GLAFQITDDILDITGDF 233 >gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293] gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293] Length = 296 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229 >gi|256845599|ref|ZP_05551057.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2] gi|256719158|gb|EEU32713.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2] Length = 297 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 120/212 (56%), Gaps = 7/212 (3%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + + + + + YA+L GGK++R FL+ L N N ++ A+E IH YSL+HD Sbjct: 25 ELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP++DN RRGK T H + E I+ G+ LLTYAF ++S + + + ++S Sbjct: 85 DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLEFLSSEQLVNIISK 144 Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 T G+ GM+GGQM+DI+ E I + I KTG L+ E I+A+ ++++ Sbjct: 145 TSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKTGKLIKLPIEIACIIANVEKDKR 204 Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 + L + + +G+ FQ+ DD+LD E EDL K Sbjct: 205 KVLEEYADLIGLAFQVKDDILDIEGTFEDLGK 236 >gi|313623887|gb|EFR94002.1| geranyltranstransferase [Listeria innocua FSL J1-023] Length = 293 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 81/190 (42%), Positives = 114/190 (60%), Gaps = 3/190 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV N+ + L+ A+E IH YSLIHDDLP+MD+ RRGK T H Sbjct: 43 GGKRIRPMLVFATLQALNIEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKWTNH 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y + TAI+AG+ LLT AF I++ + L R L+ ++++ G +GM+GGQ D++ Sbjct: 103 KIYGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISYSSGAEGMVGGQQADME 161 Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E T ++ I KTG L+ FA S A +A A+ + +RLR F EN+GI FQ++DD Sbjct: 162 AENKQVTLEELASIHARKTGELLIFAVTSAAKIAEATPEQTKRLRIFAENIGIGFQISDD 221 Query: 227 LLDCEEDLPK 236 +LD D K Sbjct: 222 ILDVIGDETK 231 >gi|308180453|ref|YP_003924581.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045944|gb|ADN98487.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 296 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 113/196 (57%), Gaps = 6/196 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L A+RY++L GGK++R L F++ A LR A+E +H YSLIHDDLP+MD Sbjct: 34 LTDAMRYSVLAGGKRLRPLLTLAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PT H+++ E AI+AG+ L FE I+ + L +I + L+L G Sbjct: 94 NDQLRRGEPTNHVKFGEDVAILAGDALQPLTFEWIAD--SGLPASIVANQTLALAQATGP 151 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM+ GQ+ D+ + + + + + KTGAL+ +A ++G I A +E L + Sbjct: 152 RGMVAGQIADVLGAGQHLALPALQQLHREKTGALIHYAVQAGLIQAQVQPAVQELLLQYA 211 Query: 215 ENLGIIFQLADDLLDC 230 + G+ FQ+ DD+LD Sbjct: 212 DAYGLAFQIYDDILDV 227 >gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies] Length = 385 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 116/200 (58%), Gaps = 4/200 (2%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 +H +++ A+RY+LL GGK++R L L + + + A+E IH SLIHDDL Sbjct: 116 RHPEKIHEAMRYSLLAGGKRVRPILCIASCELVGGSEESVMPSACAVEMIHTMSLIHDDL 175 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT H + E A++AG+ LL +AFE I+ ++ +++ L Sbjct: 176 PCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIACSTKGVEAEKVLRVIWELGR 235 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKER 209 IG +G++ GQ++D+ + + +++ + KT AL+ + GAI+ S E ER Sbjct: 236 AIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVHKTAALLEGSVVIGAIIGGGSDEEIER 295 Query: 210 LRCFGENLGIIFQLADDLLD 229 LR F +G++FQ+ DD+LD Sbjct: 296 LRRFARCIGLMFQVVDDILD 315 >gi|300767239|ref|ZP_07077151.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300495058|gb|EFK30214.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 308 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 113/196 (57%), Gaps = 6/196 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L A+RY++L GGK++R L F++ A LR A+E +H YSLIHDDLP+MD Sbjct: 46 LTDAMRYSVLAGGKRLRPLLTLAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMD 105 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PT H+++ E AI+AG+ L FE I+ + L +I + L+L G Sbjct: 106 NDQLRRGEPTNHVKFGEDVAILAGDALQPLTFEWIAD--SGLPASIVANQTLALAQATGP 163 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM+ GQ+ D+ + + + + + KTGAL+ +A ++G I A +E L + Sbjct: 164 RGMVAGQIADVLGAGQHLALPALQQLHREKTGALIHYAVQAGLIQAQVQPAVQELLLQYA 223 Query: 215 ENLGIIFQLADDLLDC 230 + G+ FQ+ DD+LD Sbjct: 224 DAYGLAFQIYDDILDV 239 >gi|294785112|ref|ZP_06750400.1| geranyltranstransferase [Fusobacterium sp. 3_1_27] gi|294486826|gb|EFG34188.1| geranyltranstransferase [Fusobacterium sp. 3_1_27] Length = 297 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 7/202 (3%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 + YA L GGK++R FL+ L N N ++ A+E IH YSL+HDDLP++DN Sbjct: 35 GMEYATLNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDY 94 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGM 159 RRGK T H + E I+ G+ LLTYAF ++S +L + + ++S T G+ GM Sbjct: 95 RRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNIISKTSEYAGINGM 154 Query: 160 LGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 +GGQM+DI+ E I + I KTG L+ E I+A+ +++++ L + + + Sbjct: 155 IGGQMIDIESENKKIGLETLKYIHSHKTGKLIKLPIEIACIIANVEKDKRKVLEEYADLI 214 Query: 218 GIIFQLADDLLDCE---EDLPK 236 G+ FQ+ DD+LD E EDL K Sbjct: 215 GLAFQVKDDILDVEGTFEDLGK 236 >gi|229123698|ref|ZP_04252893.1| Geranyltranstransferase [Bacillus cereus 95/8201] gi|228659833|gb|EEL15478.1| Geranyltranstransferase [Bacillus cereus 95/8201] Length = 296 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 136/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + L A+ Y+L GGK++R L+ F+ Sbjct: 10 KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMKAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229 >gi|255524169|ref|ZP_05391129.1| Polyprenyl synthetase [Clostridium carboxidivorans P7] gi|296186627|ref|ZP_06855029.1| putative geranyltranstransferase [Clostridium carboxidivorans P7] gi|255512154|gb|EET88434.1| Polyprenyl synthetase [Clostridium carboxidivorans P7] gi|296048664|gb|EFG88096.1| putative geranyltranstransferase [Clostridium carboxidivorans P7] Length = 293 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 115/201 (57%), Gaps = 4/201 (1%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + +N ++ A+ Y+L GGK+IR L+ L+ + L + +A+E IH YSLIHD Sbjct: 25 KGSYNKKVYEAMEYSLGAGGKRIRPLLLLLTYMLYKDDFEKVLPIASAVEMIHTYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP MDN +RRGKPT H + E A++AG+GLL I+ + N + Sbjct: 85 DLPCMDNDDLRRGKPTNHKVFGEAVAVLAGDGLLNEGMSIMLKSCMNEQHNFIKACSF-I 143 Query: 151 THNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + G +GM+GGQ +DI ++ I Q++ + KTGA++ + +GAI+ A + + E Sbjct: 144 AESAGAEGMVGGQTVDILSENTKIPIDQLYYMHSKKTGAIIKASIIAGAILGEAPKRDIE 203 Query: 209 RLRCFGENLGIIFQLADDLLD 229 L +G+ LG+ FQ+ DD+LD Sbjct: 204 NLEYYGQKLGLAFQIKDDILD 224 >gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 371 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 77/195 (39%), Positives = 113/195 (57%), Gaps = 8/195 (4%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L TA+ A+E IH SLIHDDLP MDN + Sbjct: 106 AMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL 165 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQLMLSLTHNIGLQG 158 RRGKPT H + E A++AG+ LL++AFE + S+ + + +R + + L IG +G Sbjct: 166 RRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEG 225 Query: 159 MLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 ++ GQ++DI E +D V + I KT AL+ + AI+ S +E ERLR F Sbjct: 226 LVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLRAIVGGGSDDEIERLRKF 285 Query: 214 GENLGIIFQLADDLL 228 +G++FQ+ DD+L Sbjct: 286 ARCIGLLFQVVDDIL 300 >gi|90410905|ref|ZP_01218919.1| putative geranyltranstransferase [Photobacterium profundum 3TCK] gi|90328118|gb|EAS44429.1| putative geranyltranstransferase [Photobacterium profundum 3TCK] Length = 300 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 9/202 (4%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ ++Y LLGGK+ R FL + AA+ECIH YSLIHDDLP+MD+ Sbjct: 36 LVKTMKYGTLLGGKRARPFLTYITGQMLGAECADLDTPAAAVECIHAYSLIHDDLPAMDD 95 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ---LMLSLTHNI 154 +RRG PT HI +DE AI+AG+ L T AFEI++ QL D+ +Q ++ L Sbjct: 96 DELRRGHPTCHIAFDEALAILAGDALQTLAFEILAD--GQLSDDGNTQRIAMIKELAQAS 153 Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLR 211 G GM GQ LD++ E +D ++ I K KTGAL+ A GA+ A +L Sbjct: 154 GAAGMCVGQALDLEAEGKRVDLQKLEAIHKHKTGALIRCAVRLGALAAGQKGVAVLPQLN 213 Query: 212 CFGENLGIIFQLADDLLDCEED 233 F + +G+ FQ+ DD+LD D Sbjct: 214 QFADAIGLAFQVQDDILDVTSD 235 >gi|32490894|ref|NP_871148.1| hypothetical protein WGLp145 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166100|dbj|BAC24291.1| ispA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 300 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 132/214 (61%), Gaps = 7/214 (3%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L+L+ ++ ++ N L A++YALL GGK++R+FLV + NV+ + A+IE Sbjct: 16 NLILKKYLNIFSKKNMNLTLAMKYALLNGGKRLRAFLVYCIGKMLNVSSNNLDCIAASIE 75 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT-QLK 139 CIH YSLIHDDLPSMDN RRG+ + H++++E AI+AG+ L + AF I+S+ + Sbjct: 76 CIHAYSLIHDDLPSMDNDRFRRGRESCHVKFNEYIAILAGDSLQSLAFNILSTVNMPDVS 135 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGA 197 N R +++ L++ G +GM GQ LD++++ I Q+ I K KT L+ +A Sbjct: 136 VNNRMKMISILSYASGAKGMCLGQSLDLENQGSLISIKQLEEIYKYKTSFLI-YAATRMT 194 Query: 198 IMAHASQNEKERLRC--FGENLGIIFQLADDLLD 229 I++ +N+K + + +++G+ FQ+ DD+L+ Sbjct: 195 ILSSNIKNKKILINLIKYSKSIGLAFQIQDDILN 228 >gi|167770736|ref|ZP_02442789.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM 17241] gi|167667331|gb|EDS11461.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM 17241] Length = 293 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 116/198 (58%), Gaps = 4/198 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 ++ A+RY+LL GK++R+ LV E A L + A + AIE +H YSLIHDDLP MDN Sbjct: 33 VVDAMRYSLLDAGKRLRAALVLEFARLASAPREGATALACAIEMLHAYSLIHDDLPCMDN 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKP+ H ++ E TA++AG+ LLT AFE + L D R + + +L+ G+ Sbjct: 93 DDFRRGKPSCHKEFGESTALLAGDALLTLAFETAAGAPL-LTDLQRVEAVCTLSKAGGVC 151 Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ++D+ E +DE + + +KTGAL+ A G + A + + + Sbjct: 152 GMIGGQVIDLACEGNTVDEATLDTLCTLKTGALLRAAARLGCLAGKADKKMYDAADRYAA 211 Query: 216 NLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 212 AVGLAFQITDDILDVTGD 229 >gi|292492812|ref|YP_003528251.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4] gi|291581407|gb|ADE15864.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4] Length = 296 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 116/201 (57%), Gaps = 6/201 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+LGG K++R LV + +A+E IH YSL+HDDLPSMD Sbjct: 32 RLHEAMRYAVLGGGKRLRPLLVYSTGMALGASEAVLDAPASAVELIHAYSLVHDDLPSMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PT H +DE TA++ G+ L + AF I++ + L + + ++++ L Sbjct: 92 NDDLRRGRPTCHKAFDEATALLVGDALQSLAFRILADSTSGLPASNQIKMLMLLAEAASS 151 Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRC 212 +GM GGQ +D++ + + ++ + ++KTGAL+ + GA H + + E L Sbjct: 152 RGMAGGQAIDLESVGQLLTLAELETMHRLKTGALIRASVLLGA-WCHPTIDPHTLENLDR 210 Query: 213 FGENLGIIFQLADDLLDCEED 233 F + +G+ FQ+ DD+LD E D Sbjct: 211 FAQCIGLAFQIQDDVLDVESD 231 >gi|225458370|ref|XP_002283364.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 371 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 16/222 (7%) Query: 22 DLLLQTASHMQTQHND--------RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 D ++Q AS + ++ ++ A+RY+LL GGK++R L L + A Sbjct: 82 DYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKRVRPALCLAACELVGGDESNA 141 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ LL +AFE ++ Sbjct: 142 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEHLA 201 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGA 187 + + + + + L +IG +G++ GQ++DI D +D+ + I KT A Sbjct: 202 TATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIH--KTAA 259 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ A GA++ S E E+LR + +G++FQ+ DD+LD Sbjct: 260 LLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILD 301 >gi|237737790|ref|ZP_04568271.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229419670|gb|EEO34717.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 300 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 110/196 (56%), Gaps = 3/196 (1%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++YA+L GGK++R L+ + L +AIE IH YSL+HDDLP++DN Sbjct: 39 GMKYAVLNGGKRLRPILLFMTLDILGCEREKGLATASAIEMIHSYSLVHDDLPALDNDDY 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGK T H ++ E I+ G+ LLT+AF +++ + L +++ + G+ GM+ Sbjct: 99 RRGKLTTHKKFGEAEGILIGDALLTHAFYVLTEKNSHLSAEKIVEIVKLTSSYAGINGMI 158 Query: 161 GGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQM+DI E ID + + KTG L+ E ++A AS ++E L + E +G Sbjct: 159 GGQMVDIASEGKKIDLETLRYMHAHKTGKLIKLPVEVACVIADASIEDREVLTKYSELIG 218 Query: 219 IIFQLADDLLDCEEDL 234 + FQ+ DD+LD E D Sbjct: 219 LAFQIKDDILDIEGDF 234 >gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579] gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579] Length = 296 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 134/224 (59%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANGLQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K K G Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKAGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229 >gi|315658203|ref|ZP_07911075.1| geranyltranstransferase [Staphylococcus lugdunensis M23590] gi|315496532|gb|EFU84855.1| geranyltranstransferase [Staphylococcus lugdunensis M23590] Length = 293 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 89/229 (38%), Positives = 139/229 (60%), Gaps = 13/229 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 +++ +LDDL+ Q++ L +++Y++ GGK++R L+ + N ++ L Sbjct: 12 QVNQVLDDLI------PQSKLGTNLEKSMQYSINAGGKRVRPLLLLLTLDMLNKDYQLGL 65 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 AA+E IH YSLIHDDLP+MD+ RRGK T H + E A++AG+ LLT AF++IS+ Sbjct: 66 ATAAALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVFGEWKAVLAGDALLTKAFDVISN 125 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 TQL ++I+ +L+ L G GM+GGQ LD+Q E +D + + I + KTGAL+ F Sbjct: 126 D-TQLDNDIKVKLIQRLAFASGHLGMVGGQALDMQSETQAVDISTLEQIHRAKTGALLTF 184 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 A + +A +++ E L F ++LG++FQ+ DDLLD E L KK Sbjct: 185 AVMAATDIAQVNEHVAEHLNLFSQHLGLMFQIKDDLLDVYGEESKLGKK 233 >gi|16800468|ref|NP_470736.1| hypothetical protein lin1400 [Listeria innocua Clip11262] gi|16413873|emb|CAC96631.1| lin1400 [Listeria innocua Clip11262] Length = 293 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 81/190 (42%), Positives = 114/190 (60%), Gaps = 3/190 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV N+ + L+ A+E IH YSLIHDDLP+MD+ RRGK T H Sbjct: 43 GGKRIRPMLVFATLQALNIEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKWTNH 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y + TAI+AG+ LLT AF I++ + L R L+ ++++ G +GM+GGQ D++ Sbjct: 103 KIYGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISYSSGAEGMVGGQQADME 161 Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E T ++ I KTG L+ FA S A +A A+ + +RLR F EN+GI FQ++DD Sbjct: 162 AENKQVTLEELASIHARKTGELLIFAVTSAAKIAEATPEQTKRLRIFAENIGIGFQISDD 221 Query: 227 LLDCEEDLPK 236 +LD D K Sbjct: 222 ILDVIGDETK 231 >gi|91777309|ref|YP_552517.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400] gi|91689969|gb|ABE33167.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400] Length = 293 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 11/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R++T LD L A+ T H A+RYA+LGG K++R L L Sbjct: 12 ERVETALDHYLPGEATEPATLHE-----AMRYAVLGGGKRVRPLLCHAAGELTGARAECL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L + AF ++ Sbjct: 67 DAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVALT 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190 S L ++ L+ L G GM GGQ +D+ + TQ+ + +MKTGAL+ Sbjct: 127 S--DVLAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLR 184 Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 A GA+ R L + +G+ FQ+ DD+LD D Sbjct: 185 AAVRMGALAGETPDAAAMRSLDAYSAAVGLAFQVVDDILDVTTD 228 >gi|227550446|ref|ZP_03980495.1| Geranyltranstransferase [Enterococcus faecium TX1330] gi|257888474|ref|ZP_05668127.1| polyprenyl synthetase [Enterococcus faecium 1,141,733] gi|257897151|ref|ZP_05676804.1| polyprenyl synthetase [Enterococcus faecium Com12] gi|293377376|ref|ZP_06623580.1| geranyltranstransferase [Enterococcus faecium PC4.1] gi|227180347|gb|EEI61319.1| Geranyltranstransferase [Enterococcus faecium TX1330] gi|257824528|gb|EEV51460.1| polyprenyl synthetase [Enterococcus faecium 1,141,733] gi|257833716|gb|EEV60137.1| polyprenyl synthetase [Enterococcus faecium Com12] gi|292644068|gb|EFF62174.1| geranyltranstransferase [Enterococcus faecium PC4.1] Length = 296 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 29 SHMQTQHNDRLL-SAIRYAL-LGGKKIRSFLV-TECASLFNVNHLTALRVGAAIECIHCY 85 S + DR L A+ Y++ GGK+IR L+ T AS + +V AA+E +H Y Sbjct: 20 SFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTY 79 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS L + + Sbjct: 80 SLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISM--AHLGHSPKLL 137 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ L G QGM+ GQ DI+ E + ++ I + KTG L+ +A +G I+A Sbjct: 138 LLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQP 197 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230 + L+ E+LG+ FQ+ DDLLD Sbjct: 198 EEILLLLQRLAEHLGLAFQIRDDLLDV 224 >gi|108759145|ref|YP_632810.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622] gi|108463025|gb|ABF88210.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622] Length = 297 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 81/230 (35%), Positives = 125/230 (54%), Gaps = 12/230 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L S L R++ +L++ + A + +L A+RY+LL GGK++R L A Sbjct: 6 LNSFLAAQQARVEALLNE---RVARLGPSGTPPQLAEAMRYSLLAGGKRLRPVLCLAFAD 62 Query: 64 LFNVNHLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + G A+E +H YSL+HDDLP+MDN RRG+ T H Y E AI+AG Sbjct: 63 LVARGSAVSAVAGDAACALEYVHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAMAILAG 122 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM- 179 + LLT AF +++S +++R+ L L G GM+GGQ+LD ++ + Sbjct: 123 DALLTEAFTLVASG----PESMRAALCRELAVASGAAGMVGGQVLDTAEDRPSALDYLIR 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + +MKTGAL+ AC G + + + R +G+ +G+ FQ+ADD+LD Sbjct: 179 MHRMKTGALIRAACRMGVLASGGDADALARADTYGDAVGLAFQIADDVLD 228 >gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii] Length = 365 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 115/199 (57%), Gaps = 3/199 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q ++ A+RY+LL GGK++R L + + A+ A+E IH SL+HDDL Sbjct: 97 QEPIKVHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAIPAACAVEMIHTMSLVHDDL 156 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT H + E TA++AG+ LL+ AFE +++ + Q + L Sbjct: 157 PCMDNDDLRRGKPTNHKVFGENTAVLAGDALLSLAFEHVATKTQNVAPQRVVQAIGELGS 216 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +G +G++ GQ++D+ E + T++ I + KT L+ A GAIM ++ + ER+ Sbjct: 217 AVGSEGLVAGQIVDLASEGKQVSLTELEYIHQHKTAKLLEAAVVCGAIMGGGNEVDVERM 276 Query: 211 RCFGENLGIIFQLADDLLD 229 R + +G++FQ+ DD+LD Sbjct: 277 RSYARCIGLLFQVVDDILD 295 >gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805] gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805] Length = 315 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 118/207 (57%), Gaps = 7/207 (3%) Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + + + + L ++RY+LL GGK++R L L + A+ A+E IH SL Sbjct: 43 AALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGDASLAMPTAVALEMIHTMSL 102 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQ 145 IHDDLP+MDN +RRG+PT H Y + AI+AG+ LL+ AFE++S SP + ++ Sbjct: 103 IHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAFEMVSLRSPGVPPERLLKVV 162 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+L G G++GGQ++D++ E +D + I KT AL+ +GA++ A Sbjct: 163 AELALVS--GAPGLVGGQVVDLESEGREVDLETLEYIHLHKTAALLRACVVTGALIGGAD 220 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230 N+ E +R + +G+ FQ+ DD+LD Sbjct: 221 ANQVEAMRTYANGIGLAFQIVDDILDV 247 >gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1] gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1] Length = 295 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 115/199 (57%), Gaps = 3/199 (1%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+RY++L GGK++R L L AA+E IH YSL+HDD+P MD Sbjct: 32 RLHAAMRYSVLEGGKRVRPLLAYAAGELAGAPIERVEIAAAAVELIHAYSLVHDDMPCMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPT HI+YDE TA++ G+ L + AF+++S + + + Q++ L G Sbjct: 92 DDVLRRGKPTCHIEYDEATALLVGDALQSLAFQLLSEHRLSDDPSRQLQMVRLLAAASGS 151 Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM GGQ +D+ + + ++ + KTGAL+ A GA Q + ++L +G Sbjct: 152 RGMAGGQAIDLASVGKQLAMPELEQMHIYKTGALIRAAILLGAHCGKLDQAQLDKLDRYG 211 Query: 215 ENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD E D Sbjct: 212 KCIGLAFQVVDDVLDSEAD 230 >gi|89099255|ref|ZP_01172133.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. NRRL B-14911] gi|89086101|gb|EAR65224.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. NRRL B-14911] Length = 298 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 80/197 (40%), Positives = 120/197 (60%), Gaps = 4/197 (2%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ Y+L GGK+IR LV F + L+ AA+E IH YSLIHDDLPSMD+ Sbjct: 35 LKKAMHYSLQAGGKRIRPLLVFATLKAFGEDTKKGLQAAAAVEMIHTYSLIHDDLPSMDD 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGL 156 +RRGKPT H + E AI+AG+ LLTY+F++++ + D ++ L+ L G Sbjct: 95 DDLRRGKPTSHKVFGEANAILAGDALLTYSFQLLAQMAPEDADAEVKLALINELARASGA 154 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM+GGQ DI +D+ +D ++ I KTG L+ F+ +GA+++ A ++ + L F Sbjct: 155 EGMVGGQTADIEGEDKDLDLEELEYIHVHKTGKLLAFSVAAGALLSRAEESRLKSLNEFA 214 Query: 215 ENLGIIFQLADDLLDCE 231 +LG+ FQ+ DD+LD E Sbjct: 215 HHLGLAFQIRDDILDLE 231 >gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1] gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1] Length = 296 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 83/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E +H YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMVHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229 >gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC 2396] gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC 2396] Length = 299 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 86/231 (37%), Positives = 126/231 (54%), Gaps = 14/231 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 Q N +ID L +LL + RL A+ Y +L GGK++R L+ Sbjct: 12 FQRNRAQIDQALANLLPEPEGP-----KARLNEAMGYCVLNGGKRVRPLLLLATTEALGG 66 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AL A+E IH YSL+HDDLP+MD+ +RRGKPT HI YDE TAI+ G+GL T A Sbjct: 67 DLQQALPACCAVELIHAYSLVHDDLPAMDDDSLRRGKPTCHIAYDEATAILVGDGLQTLA 126 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKM 183 F ++ +++ Q++ L G QGM+GGQ +DI E ++E + ++ Sbjct: 127 FSALTESSGASAESVL-QMVRELARASGHQGMVGGQAIDIYSEGHTLKLEELERMHLE-- 183 Query: 184 KTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ + GA+ + + E E LR F +G+ FQ+ DD++D E D Sbjct: 184 KTGALIEASIVLGALASGRADAECIEGLRRFARAIGLAFQVRDDIIDVESD 234 >gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata] Length = 366 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/195 (37%), Positives = 109/195 (55%), Gaps = 4/195 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + A+RY+LL GGK++R L L + A+ A+E IH SLIHDDLP MDN Sbjct: 102 IYEAMRYSLLAGGKRVRPMLCLAACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDN 161 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 IRRGKPT H Y E A++AG+ LL +AFE I++ + + + L +IG + Sbjct: 162 DDIRRGKPTNHKVYGEDVAVLAGDSLLAFAFEFIATATAGVSPSRILAAIGELAKSIGTE 221 Query: 158 GMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G++ GQ+ DI + + + I KT AL+ + GAI+ + E E+LR F Sbjct: 222 GLVAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRRFA 281 Query: 215 ENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 282 RCIGLLFQVVDDILD 296 >gi|153853044|ref|ZP_01994453.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814] gi|149753830|gb|EDM63761.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814] Length = 300 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 78/228 (34%), Positives = 129/228 (56%), Gaps = 10/228 (4%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 +++ I+ IL + L + + + ++ A+ Y+L+ GGK++R L+ E + LF Sbjct: 10 QMKRKVAEIEEILKEYLPKPEGYQKV-----IMEAMEYSLMAGGKRLRPMLMRETSRLFG 64 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 AA+E IH YSL+HDDLP+MDN RRG+ T HI Y E I+AG+ LL Y Sbjct: 65 DETEALCPFMAALEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNY 124 Query: 127 AFEI-ISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182 AFE + +T +++++ LS L G+ GM+GGQ++D+++ + + + I + Sbjct: 125 AFETAFRAFETAPQESLKIGRALSVLGRKAGVYGMIGGQVIDVKETGHAVPKDVLDTIYE 184 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +KTGAL+ A GAI+ A + + ++ +GI FQ+ DD+LD Sbjct: 185 LKTGALIECAMMIGAILGGAEEEDVRKVEKIAHYVGIAFQIQDDILDV 232 >gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus] Length = 368 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 4/197 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ ++RY+LL GGK++R L L + A+ A+E IH SLIHDDLP MD Sbjct: 103 KIHESMRYSLLAGGKRVRPALCLAACELVGGDESMAMPAACAVEMIHTMSLIHDDLPCMD 162 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT HI + E A++AG+ LL +AFE I+ + + + L IG Sbjct: 163 NDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVSTLNVSPVRIVRGVGELAKAIGA 222 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E + E ++ I KT L+ A GAIM + E E+LR + Sbjct: 223 EGLVAGQVVDICSEGLSEVDLEKLEFIHIHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKY 282 Query: 214 GENLGIIFQLADDLLDC 230 ++G++FQ+ DD+LD Sbjct: 283 ARDIGLLFQVVDDILDV 299 >gi|205351734|ref|YP_002225535.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855904|ref|YP_002242555.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205271515|emb|CAR36333.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707707|emb|CAR31991.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326626769|gb|EGE33112.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 299 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 86/204 (42%), Positives = 122/204 (59%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT HI++ E AI+AG+ L T AF I+S +P ++ D R ++ L + Sbjct: 88 AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAILSDAPMPEVTDRDRIAMIAELAN 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E I + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDRYAESIGLAFQVQDDILDVVGD 231 >gi|312869913|ref|ZP_07730052.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3] gi|311094498|gb|EFQ52803.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3] Length = 291 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/228 (35%), Positives = 125/228 (54%), Gaps = 16/228 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALL-GGKKIRSFLVTECASLFN 66 L++ R+ + LD +H+ + L+A ++Y++L GGK++R L +F Sbjct: 5 LEQLKARVTSYLD-------THLANDVDQSTLAASMQYSVLAGGKRLRPTLTLATVEIFG 57 Query: 67 VNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 LT +R A+E +H YSLIHDDLP+MDN +RRG PT H ++ A +AG+GLL Sbjct: 58 -GELTEDVVRAATALELLHTYSLIHDDLPAMDNDDLRRGAPTNHRKFGAGMATLAGDGLL 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQK 182 T AF+ ++ QL ++SQL L L G GM+ GQ DI+ T Q+ + + Sbjct: 117 TLAFQWVTD--NQLPATMKSQLALELAKAAGPAGMVAGQARDIEGTGRRLTLDQLRYLHR 174 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTGAL+ +A +G I+ + L FG + G+ FQ+ DDL+D Sbjct: 175 QKTGALLRYAVLAGGIITVQPAAVQRLLAQFGSSYGLAFQIYDDLMDV 222 >gi|323488929|ref|ZP_08094166.1| geranyltranstransferase [Planococcus donghaensis MPA1U2] gi|323397321|gb|EGA90130.1| geranyltranstransferase [Planococcus donghaensis MPA1U2] Length = 293 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 84/201 (41%), Positives = 128/201 (63%), Gaps = 11/201 (5%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 D L ++ Y+L GGK+IR L+ + H AL+V AAIE IH YSLIHDDLPS Sbjct: 29 DSLKESMHYSLQAGGKRIRPILLLAVLHEMTGKEHPDALKVAAAIEMIHTYSLIHDDLPS 88 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRG PT H + E AI+AG+ LLTY+F +++ + D+ + +L+ ++ + Sbjct: 89 MDDDDLRRGMPTNHKVFGEAVAILAGDALLTYSFGVVARLEHVSSDD-KVRLIDLMSVSA 147 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKER 209 G +GM+GGQ+LDI+ E E Q+ + + ++KTGAL+ F+ +G I+A A+ +E Sbjct: 148 GAEGMVGGQVLDIEGE---EKQLQLEELEQVHRLKTGALLTFSILAGGILAQATNDEIIA 204 Query: 210 LRCFGENLGIIFQLADDLLDC 230 L FG++LG+ FQ+ DD+LD Sbjct: 205 LSQFGQHLGLAFQIQDDILDV 225 >gi|332160732|ref|YP_004297309.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664962|gb|ADZ41606.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861141|emb|CBX71403.1| geranyltranstransferase [Yersinia enterocolitica W22703] Length = 306 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 123/204 (60%), Gaps = 7/204 (3%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLP 93 N L+ A+RY A+LGGK++R +LV +F ++ LT+L AAIECIH YSLIHDDLP Sbjct: 36 NSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGLS-LTSLDAPAAAIECIHAYSLIHDDLP 94 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG+PT H+++ E AI+AG+ L T AF I++ +P + D R ++ L H Sbjct: 95 AMDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEAPMPDVADKDRLSMIAELAH 154 Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209 G+ GM GGQ LD+ E T + I + KTGAL+ A GA+ A A E Sbjct: 155 ASGVAGMCGGQALDLAAESRQTTLDDLEKIHRHKTGALIRAAVRLGALAAGAPGREALPL 214 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 215 LDRYANAIGLAFQVQDDILDVIGD 238 >gi|299139494|ref|ZP_07032668.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8] gi|298598422|gb|EFI54586.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8] Length = 324 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 81/220 (36%), Positives = 120/220 (54%), Gaps = 33/220 (15%) Query: 42 AIRYALL-GGKKIRSFLVTECASLF------------NVNHLTAL-RVGAAIECIHCYSL 87 A+R++ GGK++R L E A + H + + AA+E +H YSL Sbjct: 37 AMRHSTFAGGKRLRPILCMEAAKMVASTDFYPPEEAAPAGHPEGVANLAAALEMLHTYSL 96 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRS 144 IHDDLP++DN +RRG+PT H+ + E TAI+AG+ L T AF+ I+S P + +R Sbjct: 97 IHDDLPALDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQTIASLPAPPEAVVAILR- 155 Query: 145 QLMLSLTHNIG---------LQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFAC 193 ++ LS+ IG GM+GGQ++DI+ E T V I + KTGAL+ + Sbjct: 156 KISLSIGTGIGRWGDHDTGIAPGMIGGQVVDIESEGTKPTPDLVEAIHRAKTGALITVSI 215 Query: 194 ESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLLD 229 +GAI + + ER+R FGE G+ FQ+ DD+LD Sbjct: 216 VAGAIYGSSRHGLPSSYHERIRTFGEKAGLAFQIVDDVLD 255 >gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803] gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803] Length = 296 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 134/224 (59%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + R A+ Y+L GGK++R L+ F Sbjct: 10 KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGELLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ +++ L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGAILSDATEEQEKNLLTFAKYIGLAFQIRDDILDVE 229 >gi|213417843|ref|ZP_03350948.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 268 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 121/200 (60%), Gaps = 5/200 (2%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP+MD+ Sbjct: 1 MVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDD 60 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG PT HI++ E AI+AG+ L T AF IIS +P ++ D R ++ L + G+ Sbjct: 61 DDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANASGI 120 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213 GM GGQ LD+ E I + I + KTGAL+ A GA+ A +N L + Sbjct: 121 AGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRY 180 Query: 214 GENLGIIFQLADDLLDCEED 233 E++G+ FQ+ DD+LD D Sbjct: 181 AESIGLAFQVQDDILDVVGD 200 >gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273] gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272] gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272] gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273] Length = 297 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 134/224 (59%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + L A+ Y+L GGK++R L+ F Sbjct: 11 KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLG 68 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 69 VGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 128 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+ GQ+ D++ E I+E + I K KTG Sbjct: 129 TYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELE--YIHKHKTGK 186 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 187 LLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVE 230 >gi|116872794|ref|YP_849575.1| geranyltranstransferase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741672|emb|CAK20796.1| geranyltranstransferase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 293 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 80/190 (42%), Positives = 114/190 (60%), Gaps = 3/190 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV N + + L+ A+E IH YSLIHDDLP+MD+ RRGK T H Sbjct: 43 GGKRIRPMLVFATLQALNKDPMIGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKKTNH 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + TAI+AG+ LLT AF I++ + L R L+ ++++ G +GM+GGQ DI+ Sbjct: 103 KVFGDATAILAGDALLTLAFSIVAEDE-NLSFETRIALINQISYSSGAEGMVGGQQADIE 161 Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E T ++ I KTG L+ FA S A +A A+ + +RLR F EN+G+ FQ++DD Sbjct: 162 AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEANSEQTKRLRIFAENIGVGFQISDD 221 Query: 227 LLDCEEDLPK 236 +LD D K Sbjct: 222 ILDVIGDETK 231 >gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413] gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413] Length = 309 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/233 (35%), Positives = 130/233 (55%), Gaps = 18/233 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L+E K + LD+ + + +++ ++RY+LL GGK++R L + Sbjct: 18 LVAYLKERQKLCEAALDEAI-------PVIYPEKIYESMRYSLLAGGKRLRPILCLATSE 70 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + A+ A+E IH SLIHDDLP+MDN RRG T H Y + AI+AG+GL Sbjct: 71 MMGGTIEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGDDIAILAGDGL 130 Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 L YAFE ++ +P++ +D + Q++ L +G G++GGQ++D+ E I + Sbjct: 131 LAYAFEFVAIRTPESVPRDRVL-QVVARLGRALGAAGLVGGQVVDLDSEGKSDISLETLN 189 Query: 179 MIQKMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I KT AL+ C C G I+A AS + +RL + +N+G+ FQ+ DD+LD Sbjct: 190 FIHNHKTAALLEACVVC--GGILAGASSEDVQRLSRYSQNIGLAFQIIDDILD 240 >gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis] Length = 370 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 111/201 (55%), Gaps = 4/201 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q ++ ++RY+LL GGK++R L L N A+ A+ IH SLIHDDL Sbjct: 101 QEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVGMIHTMSLIHDDL 160 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT HI + E A++AG+ LL +AFE I+ + + + L Sbjct: 161 PCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAK 220 Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 IG +G++ GQ++DI E +D ++ I KT L+ A GAI+ + E E+ Sbjct: 221 AIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEK 280 Query: 210 LRCFGENLGIIFQLADDLLDC 230 LR + +G++FQ+ DD+LD Sbjct: 281 LRKYARGIGLLFQVVDDILDV 301 >gi|323484856|ref|ZP_08090212.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum WAL-14163] gi|323401852|gb|EGA94194.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum WAL-14163] Length = 294 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 113/201 (56%), Gaps = 6/201 (2%) Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 H + A+ Y++ GGK++R L+ E LF + AAIE IH SLIHDDLP Sbjct: 27 HQKTIFEAMNYSVKAGGKRLRPLLMREVYRLFGGTGIEIEPFMAAIEMIHTSSLIHDDLP 86 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLT 151 MDN RRGK T + Y A++AG+ LL YA E ++ Q+ DN + + + L Sbjct: 87 CMDNDEYRRGKKTTWVVYGYDMAVLAGDALLIYAIE-TAARAFQMTDNAQRVGKCIGILA 145 Query: 152 HNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G+ GM+GGQ +D++ D+ I + ++ I ++KTGAL+ A GA+MA AS E E Sbjct: 146 QKTGIYGMIGGQTVDVELTDKLIPKDKLDFIYRLKTGALLEAAMVIGAVMAGASDEECET 205 Query: 210 LRCFGENLGIIFQLADDLLDC 230 + +G+ FQ+ DD+LD Sbjct: 206 VERMAAAIGLAFQIQDDILDV 226 >gi|85711191|ref|ZP_01042251.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] gi|85695104|gb|EAQ33042.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] Length = 295 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 78/196 (39%), Positives = 112/196 (57%), Gaps = 5/196 (2%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ Y LLGGK+IR +L A L AL A+E IH YSLIHDDLP+MD+ Sbjct: 31 LKEAMAYGVLLGGKRIRPYLTMAVAELCGAETNDALDAACAVELIHAYSLIHDDLPAMDD 90 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGL 156 +RRG PT HI++ E TA++AG+ L T AFE++S+ +T+L R ++ L G Sbjct: 91 DELRRGHPTCHIKFGEATAVLAGDALQTLAFEVLSTNLETKLSSQRRIAMIQHLASASGA 150 Query: 157 QGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCF 213 +GM GQ LD+ IDE ++ I + KTGAL+ + G + + SQ + F Sbjct: 151 KGMCFGQALDLDATGRAIDELELEKIHRHKTGALIRASAALGVLAGNDESQQYLDHFCDF 210 Query: 214 GENLGIIFQLADDLLD 229 +G+ +Q+ DD+LD Sbjct: 211 ASWIGLAYQVYDDILD 226 >gi|21232031|ref|NP_637948.1| farnesyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767842|ref|YP_242604.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|21113769|gb|AAM41872.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573174|gb|AAY48584.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. 8004] Length = 291 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 116/199 (58%), Gaps = 9/199 (4%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+R+A+LGG K++R LV +LF + A+E IH YSL+HDDLP+MD Sbjct: 30 RLHAAMRHAVLGGGKRMRPLLVYASGALFGAEEGSLDAPAVAVELIHAYSLVHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG PTVHI +DE TAI+AG+ L AFE+++ +R + SL G Sbjct: 90 DDALRRGHPTVHIAFDEATAILAGDALQARAFELLAEAPADAA--LRVGWLQSLASAAGA 147 Query: 157 QGMLGGQMLDIQDEFIDETQVF-MIQKM---KTGALMCFACESGAIMAHASQNEKERLRC 212 GM GGQ LDI + + Q +Q+M KTGAL+ A G + A +++RL Sbjct: 148 AGMCGGQALDI--DATGQVQALEALQRMHALKTGALIRAAVRMGVLTGGAGIADQQRLDA 205 Query: 213 FGENLGIIFQLADDLLDCE 231 F + LG+ FQ+ DD+LD E Sbjct: 206 FADALGLAFQVRDDILDVE 224 >gi|295099642|emb|CBK88731.1| Geranylgeranyl pyrophosphate synthase [Eubacterium cylindroides T2-87] Length = 282 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 77/196 (39%), Positives = 113/196 (57%), Gaps = 7/196 (3%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 R A+ Y+L+ GGK++R L+ + ++ AIE IH YSLIHDDLP+MD Sbjct: 22 RTKEAMCYSLMNGGKRVRPQLLFAALQHYGMDPKDGFACACAIEMIHTYSLIHDDLPAMD 81 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGKP+ H YDE AI+AG+GLLT AFE++ +T D + +L+ +L+ G+ Sbjct: 82 NDDFRRGKPSCHKAYDEACAILAGDGLLTKAFEVVL--RTPCSDTNKVKLVEALSSYSGI 139 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+ GQ LDIQ E + I + KT L+ AI+A+ ++ E ++ Sbjct: 140 DGMIYGQELDIQSENDPHATLDTLLKIDEYKTAKLLTLPLVCAAIIANKHED-IEIMKKI 198 Query: 214 GENLGIIFQLADDLLD 229 G +LG+ FQ+ DD+LD Sbjct: 199 GYDLGVQFQIQDDILD 214 >gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312] gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT 9312] Length = 300 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 116/199 (58%), Gaps = 3/199 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++ + L ++RY+LL GGK+IR L SL A+ AIE IH SLIHDDL Sbjct: 33 ENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDL 92 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN +RRG+PT H Y + AI+AG+ LLT AFE++S + ++ L+ Sbjct: 93 PAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVIGELSL 152 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G G++GGQ++D++ E +D + I KTGAL+ +GA++A A++ + L Sbjct: 153 VAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKACVRTGAMIAGANEETLQAL 212 Query: 211 RCFGENLGIIFQLADDLLD 229 + E +G+ FQ+ DD+LD Sbjct: 213 TTYAEGIGLAFQIIDDILD 231 >gi|268592056|ref|ZP_06126277.1| geranyltranstransferase [Providencia rettgeri DSM 1131] gi|291312449|gb|EFE52902.1| geranyltranstransferase [Providencia rettgeri DSM 1131] Length = 305 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 119/200 (59%), Gaps = 5/200 (2%) Query: 36 NDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L A+RY LLGGK++R FL S+F V+ AA+ECIH YSLIHDDLP+ Sbjct: 35 NLPLAQAMRYGTLLGGKRLRPFLTYAIGSMFGVSQENLDAPAAAVECIHAYSLIHDDLPA 94 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHN 153 MD+ +RRG+PT HI+Y E A++AG+ L T AF+++SS P + D R ++ L++ Sbjct: 95 MDDDDLRRGQPTCHIKYGEGNAVLAGDALQTLAFQLLSSAPMPDVTDKDRIAMIAELSYA 154 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210 GL GM GGQ LD+ E +D + I + KTGAL+ A GA A Q L Sbjct: 155 SGLAGMCGGQALDLDAEGKQVDLESLERIHQHKTGALIRAAIRLGAFAAGEKGQQLLPVL 214 Query: 211 RCFGENLGIIFQLADDLLDC 230 + +++G+ FQ+ DD+LD Sbjct: 215 DKYAQSIGLAFQVQDDILDV 234 >gi|56461237|ref|YP_156518.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] gi|56180247|gb|AAV82969.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] Length = 295 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 82/200 (41%), Positives = 120/200 (60%), Gaps = 5/200 (2%) Query: 36 NDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N RL A+++ L+GGK+IR +L+ A + N AL+ AA+E IH YSLIHDDLP+ Sbjct: 28 NPRLNQAMQHGVLMGGKRIRPYLLVTVADICGANKNDALQAAAAVELIHAYSLIHDDLPA 87 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHN 153 MD+ +RRG+PT HI YDE TAI+AG+ L T AFE+++ + QL + QL+ L Sbjct: 88 MDDDDLRRGQPTCHIAYDEATAILAGDALQTLAFEVLTENRMEQLPSERQLQLVQVLAKA 147 Query: 154 IGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERL 210 G +GM GQ +D+Q + + E + + KTGAL+ A G + + +Q +E+ Sbjct: 148 SGARGMCAGQAIDLQATAKIVTEDALEQMHLSKTGALITAAATMGVLCGNDNAQQWREKF 207 Query: 211 RCFGENLGIIFQLADDLLDC 230 F LG+ FQ+ DD+LD Sbjct: 208 EQFAHYLGLAFQVQDDILDV 227 >gi|121145|sp|P80042|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; Flags: Precursor gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum] Length = 369 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 121/225 (53%), Gaps = 11/225 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + E + ++ LD+ ++ H+ + A+RY+LL GGK++R L L Sbjct: 82 VTEKAISVNKALDEAIIVKEPHV-------IHEAMRYSLLAGGKRVRPMLCLAACELVGG 134 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N A+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+ LL +A Sbjct: 135 NQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFA 194 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMK 184 FE I + + + + L +IG +G++ GQ+ DI+ + + + I K Sbjct: 195 FEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHK 254 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T AL+ + GAI+ + E E+LR F +G++FQ+ DD+LD Sbjct: 255 TAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILD 299 >gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii] gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii] Length = 345 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 117/200 (58%), Gaps = 3/200 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++ + L ++RY+LL GGK++R L L + AL A+E +H SLIHDDL Sbjct: 77 KYPETLNESMRYSLLAGGKRVRPALCLAACELVGGDIHAALPAACAMEMVHTMSLIHDDL 136 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 PSMDN RRG+PT H Y E AI+AG+ LL+++FE I+ + ++++ L Sbjct: 137 PSMDNDDFRRGRPTNHKVYGEDIAILAGDALLSFSFEHIARATKGVPAERVLRVIMELGK 196 Query: 153 NIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +G G++ GQ++DIQ D+ + + I + KT AL+ + GAI+ A ++ E+L Sbjct: 197 AVGQDGLVAGQVVDIQSEDKEVGLDVLKYIHEHKTAALLEASVVCGAILGGADESTIEKL 256 Query: 211 RCFGENLGIIFQLADDLLDC 230 R + N+G+ FQ+ DD+LD Sbjct: 257 RKYSLNIGLAFQVIDDILDV 276 >gi|198283751|ref|YP_002220072.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665395|ref|YP_002426382.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248272|gb|ACH83865.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517608|gb|ACK78194.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 306 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 85/230 (36%), Positives = 125/230 (54%), Gaps = 18/230 (7%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +RI+ +L+ LL +H+ RL A+RY+ LGG K++R LV + V Sbjct: 21 RRIEDVLETLL--PPAHLLPA---RLHDAMRYSTLGGGKRVRPLLVYAAGACLGVPLELL 75 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 R AA+E IH YSL+HDDLP+MDN +RRG PT H YDE TAI+ G+GL AF +++ Sbjct: 76 DRPAAALEMIHAYSLVHDDLPAMDNDDLRRGLPTCHRAYDEATAILVGDGLQAQAFLVLA 135 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALM 189 P + + Q++ SL G +GM+GGQ +D+ E + +++M KTG LM Sbjct: 136 EPGWGMAAERQVQMLASLAQAAGSRGMVGGQAIDLA-AVGHELALPALEQMHLHKTGMLM 194 Query: 190 CFA-----CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 A C +G A + L + + +G+ FQ+ DD+LD DL Sbjct: 195 RCAIQLALCAAG---IDAQEARGAALLRYADRVGLAFQVQDDILDEIGDL 241 >gi|269962343|ref|ZP_06176693.1| geranyltranstransferase [Vibrio harveyi 1DA3] gi|269832839|gb|EEZ86948.1| geranyltranstransferase [Vibrio harveyi 1DA3] Length = 294 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 85/240 (35%), Positives = 129/240 (53%), Gaps = 18/240 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L S Q N+++++ L+ L L+ A++Y LL GGK++R FLV Sbjct: 1 MQETLTSYQQRNNQQLNLWLEQL---------PHQEQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQ---LMLSLTHNIGLQGMLGGQMLDI--QDEFIDE 174 G+ L T AF I++ + +L N SQ ++ +L G GM GQ LD+ ++ + Sbjct: 112 GDALQTLAFTILA--EGELNPNAESQRIKMVQALAQASGASGMCLGQALDLGAENRRVSL 169 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 + I + KTGAL+ A + GA+ A E L + + +G+ FQ+ DD+LD D Sbjct: 170 ADLEEIHRNKTGALINCAVKLGALAAGEKGLEVLPHLERYSKAIGLAFQVQDDILDIISD 229 >gi|161870803|ref|YP_001599976.1| geranyltranstransferase [Neisseria meningitidis 053442] gi|161596356|gb|ABX74016.1| geranyltranstransferase [Neisseria meningitidis 053442] Length = 298 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 82/196 (41%), Positives = 116/196 (59%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L V H + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGGVVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H+QYDE TA++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHVQYDEATALLVGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + + + + +KTGAL+ A GA S E L + L Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|18310802|ref|NP_562736.1| geranyltranstransferase [Clostridium perfringens str. 13] gi|18145483|dbj|BAB81526.1| geranyltranstransferase [Clostridium perfringens str. 13] Length = 301 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 124/214 (57%), Gaps = 7/214 (3%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D L+ + ++N L ++ Y++ +GGK+IR L+ ++ ++ L AIE Sbjct: 22 DQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIE 81 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLK 139 IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A +I + + K Sbjct: 82 MIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGK 141 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESG 196 +++ +++ G GM+GGQ++DI +E +E + + M KTG L+ + SG Sbjct: 142 SALKATKIIA--DAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSG 199 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A++A AS+ + ++L FG LG+ FQ+ DD+LD Sbjct: 200 AVLAEASEGDIKKLEGFGYKLGLAFQIKDDILDV 233 >gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531] gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531] Length = 291 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 115/202 (56%), Gaps = 12/202 (5%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 +D L A+ Y+L+ GGK++R L+ A + L V A+E IH YSLIHDDLP+ Sbjct: 27 DDTLRQAMAYSLMAGGKRLRPVLLMAAADAVGADGAKFLSVACALEMIHTYSLIHDDLPA 86 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGK T H + + AI+AG+GLLT AF +I + N+ + +L + I Sbjct: 87 MDNDDYRRGKLTNHKVFGDGIAILAGDGLLTLAFTVILRQQ-----NVSADTLLRVVDEI 141 Query: 155 ----GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G +GM+GGQ+LD++ E I ++ + KTGAL A SGAI+ AS+ + Sbjct: 142 SRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAALRSGAILGGASEAQLA 201 Query: 209 RLRCFGENLGIIFQLADDLLDC 230 L + E G+ FQ+ DD+LD Sbjct: 202 ALTTYAEQFGLAFQITDDILDV 223 >gi|319892507|ref|YP_004149382.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317162203|gb|ADV05746.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Staphylococcus pseudintermedius HKU10-03] Length = 293 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 91/220 (41%), Positives = 129/220 (58%), Gaps = 10/220 (4%) Query: 20 LDDLLLQTASHMQ-----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TA 72 L++LL Q H+ +Q L ++RY+L GGK+IR L+ + + L + Sbjct: 5 LNELLEQFNGHLNHAIEDSQLGTSLEQSMRYSLEAGGKRIRPLLMLATIKMLDHQKLESG 64 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + V A+E IH YSLIHDDLP+MD+ +RRGKPT H Y E AI+AG+ LLT AFE I Sbjct: 65 MHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTVYGEWLAILAGDALLTKAFEKI- 123 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 + T + I+ L+ ++ G QGM+GGQ LD+Q E I ++ I KTGAL+ Sbjct: 124 ALTTHIDAQIKVALIEKISQASGHQGMVGGQTLDMQSENQQISLEKLESIHIHKTGALIQ 183 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 FA E+ I+ Q ++L F ++LG+IFQ+ DDLLD Sbjct: 184 FAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKDDLLDV 223 >gi|283784240|ref|YP_003364105.1| geranyltranstransferase [Citrobacter rodentium ICC168] gi|282947694|emb|CBG87249.1| geranyltranstransferase [Citrobacter rodentium ICC168] Length = 299 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 122/204 (59%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVEAMQYGALLGGKRLRPFLVYATGKMFGVSLSTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF IIS +P ++ D R ++ L + Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFTIISDAPMPEVTDRDRIAMISELAN 147 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLDAEGRQVPLAALEKIHRHKTGALIRAAVRLGALSAGEKGRNVLPI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231 >gi|123443361|ref|YP_001007335.1| geranyltranstransferase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090322|emb|CAL13188.1| geranyltranstransferase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 306 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 86/203 (42%), Positives = 127/203 (62%), Gaps = 11/203 (5%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMD 96 L+ A+RY A+LGGK++R +LV +F ++ LT+L AAIEC+H YSLIHDDLP+MD Sbjct: 39 LVEAMRYGAVLGGKRLRPYLVYATGQMFGLS-LTSLDAPAAAIECVHAYSLIHDDLPAMD 97 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIG 155 + +RRG+PT H+++ E AI+AG+ L T AF I++ +P ++ D R ++ L + G Sbjct: 98 DDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEAPMPEVADKDRLSMIAELAYASG 157 Query: 156 LQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERL 210 + GM GGQ LD++ E +DE + I + KTGAL+ A GA+ A AS E L Sbjct: 158 VAGMCGGQALDLEAEARQITLDELE--RIHRHKTGALIRAAVRLGALAAGASGREALPLL 215 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD D Sbjct: 216 DRYANAIGLAFQVQDDILDVIGD 238 >gi|261822523|ref|YP_003260629.1| geranyltranstransferase [Pectobacterium wasabiae WPP163] gi|261606536|gb|ACX89022.1| Polyprenyl synthetase [Pectobacterium wasabiae WPP163] Length = 303 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 89/238 (37%), Positives = 132/238 (55%), Gaps = 14/238 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 N L + Q ++ + + DL Q++ L++A+ Y +LLGGK++R FLV Sbjct: 4 FNTQLNAHYQRTNRMLGHFIADLPFQSSP---------LVNAMEYGSLLGGKRLRPFLVY 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+A Sbjct: 55 TTGELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILA 114 Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ +P Q+ D R ++ L H G+ GM GGQ D++ E +D Sbjct: 115 GDALQTLAFSILADAPMPQVSDRDRLAMLSELAHASGVAGMCGGQSFDLEAEGHQVDLVA 174 Query: 177 VFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + I + KTGAL+ A GA A A + L + +G+ FQ+ DD+LD D Sbjct: 175 LERIHRHKTGALIRAAVRLGAFAAGDAGRAALPHLDRYANAIGLAFQVQDDILDVVGD 232 >gi|154502459|ref|ZP_02039519.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149] gi|153796855|gb|EDN79275.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149] Length = 300 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 +E + +I+ IL L + + + ++ A+ Y++L GGK++R L+ E LF Sbjct: 12 KEKTAQIERILKAYLPRAQGYQEV-----IMDAMSYSMLAGGKRLRPMLMQETYRLFGGA 66 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I+ G+ LL YAF Sbjct: 67 DSVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMGILTGDALLNYAF 126 Query: 129 EIISS-----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 E +S P+ L + + + L G+ GM+GGQ++D++ + ID ++ I Sbjct: 127 ETAASAFETAPEKSL---LIGKAIRILGQKAGIYGMIGGQVVDVKSSGKKIDGEKLEFIY 183 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++KTGAL+ + GA++A A + + +G+ FQ+ DD+LD Sbjct: 184 RLKTGALIEASMMIGAVLAGADDESVQVVEEIAAKVGMAFQIQDDILDV 232 >gi|288574875|ref|ZP_06393232.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570616|gb|EFC92173.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 300 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 120/203 (59%), Gaps = 10/203 (4%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 R+ A+ Y+L +GGK++R L A L L + A+E +H SLIHDDLP+MD Sbjct: 36 RMWDAMVYSLKVGGKRLRPVLCMAAAELLGGRSDLVLPMALALEMVHTASLIHDDLPAMD 95 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTH--- 152 + +RRG+PT H+ Y E AI+AG+ LL AFE+ P T+L I R ++ ++ H Sbjct: 96 DDVLRRGQPTNHVVYGEALAILAGDALLCQAFEL---PLTELPSEIPRGNVVKAVAHFAR 152 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERL 210 +IG G+ GGQ+LD++ E +E I +KT AL+ + +GAI++ S + E L Sbjct: 153 SIGPGGICGGQVLDMESEGSEEECSSPTEISTLKTAALIRTSLITGAILSGGSAEDLEAL 212 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 +G LG+ FQ+ADD+LD + D Sbjct: 213 ESYGLELGVAFQIADDILDVKGD 235 >gi|254521204|ref|ZP_05133259.1| geranyltranstransferase [Stenotrophomonas sp. SKA14] gi|219718795|gb|EED37320.1| geranyltranstransferase [Stenotrophomonas sp. SKA14] Length = 292 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 90/222 (40%), Positives = 126/222 (56%), Gaps = 14/222 (6%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN--VNHLT 71 RI++ LD L A Q RL A+RY++LGG K++R LV LF + HL Sbjct: 13 RIESELDAALPSPAEAPQ-----RLHQAMRYSVLGGGKRMRPLLVYASGHLFGAQLEHLD 67 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+AG+ L AF ++ Sbjct: 68 AAAM--AVELIHAYSLVHDDLPAMDDDDLRRGKPTTHIAFDEATAILAGDALQARAFGLL 125 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALM 189 + L +R + +L H G GM GGQ LDI +T + + +KTGAL+ Sbjct: 126 AD--APLPATLRVACLQTLAHASGAAGMCGGQALDIDATGQQQTLAALTRMHALKTGALI 183 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A GA+ A + + +L F + LG+ FQ+ DD+LD E Sbjct: 184 RAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVE 225 >gi|50120071|ref|YP_049238.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043] gi|49610597|emb|CAG74042.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043] Length = 303 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 123/200 (61%), Gaps = 5/200 (2%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++A+ Y +LLGGK++R FLV LF++ + AA+ECIH YSLIHDDLP+MD+ Sbjct: 33 LVNAMEYGSLLGGKRLRPFLVYTTGELFDMPLESLDAPAAAVECIHAYSLIHDDLPAMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E TAI+AG+ L T AF I++ +P TQ+ D R ++ L G+ Sbjct: 93 DDLRRGQPTCHIKFGEATAILAGDALQTLAFSILADAPMTQVSDRDRLAMISELAQASGV 152 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213 GM GGQ D++ E ++ + I + KTGAL+ A GA+ A A ++ L + Sbjct: 153 AGMCGGQAFDLEAEGHQVNLAALERIHRHKTGALIRAAVRLGALAAGDAGRDALPYLDRY 212 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 213 ANAIGLAFQVQDDILDVVGD 232 >gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis] Length = 351 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 113/196 (57%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ ++RY+LL GGK++R L L + TA+ +IE IH SL+HDDLP MD Sbjct: 86 KIHESMRYSLLAGGKRVRPMLCLAACELVGGHPSTAMPAACSIEMIHTMSLMHDDLPCMD 145 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N ++RRG PT HI + E A++AG+ LL Y+FE +++ + +++ L I Sbjct: 146 NDHLRRGHPTNHIVFGEDVAVLAGDALLAYSFEYLATATEGVLPERIVRVIAELAKCIRS 205 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G+L GQ++DI E + E + I KT AL+ + GAI+ + E ERLR F Sbjct: 206 EGLLAGQVVDICSEGVSEIGLEHLEYIHLHKTAALLEGSVVLGAILGGGNDEEVERLRKF 265 Query: 214 GENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 266 ARCIGLLFQVVDDILD 281 >gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus] Length = 372 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 112/196 (57%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ ++RY+LL GGK++R L L TA+ A+E IH SLIHDDLP MD Sbjct: 107 KIHESMRYSLLAGGKRVRPMLCIAACELVGGLESTAMPSACAVEMIHTMSLIHDDLPCMD 166 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H Y E A++AG+ LL ++FE ++ + + +++ L IG Sbjct: 167 NDDLRRGKPTNHKIYGEDVAVLAGDALLAFSFEHVAKSTKGVSSDRIVRVIGELAKCIGS 226 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E + E + I KT AL+ + GAI+ A + E+LR F Sbjct: 227 EGLVAGQVVDISSEGMTEVGLEHLEFIHVHKTAALLEASVVLGAIVGGADDEDVEKLRKF 286 Query: 214 GENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 287 ARCIGLLFQVVDDILD 302 >gi|237742320|ref|ZP_04572801.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13] gi|229429968|gb|EEO40180.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13] Length = 297 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 7/212 (3%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + + + + + YA L GGK++R FL+ L N N ++ A+E IH YSL+HD Sbjct: 25 ELSYPETIAKGMEYATLNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP++DN RRGK T H + E I+ G+ LLTYAF ++S + + + ++S Sbjct: 85 DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLEFLSSEQLVNIISK 144 Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 T G+ GM+GGQM+DI+ E I + I KTG L+ E I+A+ ++++ Sbjct: 145 TSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKTGKLIKLPIEIACIIANVEKDKR 204 Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 + L + + +G+ FQ+ DD+LD E EDL K Sbjct: 205 KVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236 >gi|290968311|ref|ZP_06559853.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L] gi|290781670|gb|EFD94256.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L] Length = 295 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 75/196 (38%), Positives = 110/196 (56%), Gaps = 5/196 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ Y+LL GGK+IR L + V A+EC+H YSLIHDDLP+MDN Sbjct: 33 LYKAMNYSLLAGGKRIRPILFLAALEALGKESSVYMDVACALECVHSYSLIHDDLPAMDN 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPT H + E AI+AG+GLLT+AFE+++ + + I + + + L H G Sbjct: 93 DDLRRGKPTNHRVFGEGMAILAGDGLLTFAFELLARQRVADAEKIGACIRV-LAHAAGPA 151 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ D+ E I + ++ + KTG + I+A A ++ L+ + Sbjct: 152 GMVGGQAYDLLSEGHGDIGTEGLKLMHRGKTGVIFEAVMSMAGILAAAPAAVRQVLQAYA 211 Query: 215 ENLGIIFQLADDLLDC 230 E LG+ FQ+ DD+LD Sbjct: 212 EQLGLTFQITDDILDA 227 >gi|62179034|ref|YP_215451.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62126667|gb|AAX64370.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713495|gb|EFZ05066.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 299 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 86/204 (42%), Positives = 121/204 (59%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT HI++ E AI+AG+ L AF IIS +P ++ D R ++ L + Sbjct: 88 AMDDDDLRRGLPTCHIKFGEANAILAGDALQALAFAIISDAPMPEVADRDRIAMIAELAN 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E I + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDRYAESIGLAFQVQDDILDVVGD 231 >gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414] gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414] Length = 309 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 18/233 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + LQ+ K +T LD + + +++ ++RY+LL GGK++R L Sbjct: 18 LAAYLQKRKKLCETALDQAI-------PVIYPEKIYESMRYSLLAGGKRLRPILCLAACE 70 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + A+ A+E IH SLIHDDLP+MDN RRG+ T H Y + AI+AG+GL Sbjct: 71 MIGGTISMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGL 130 Query: 124 LTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176 L YAFE ++ TQ +N+ Q++ L +G G++GGQ++D+ E I Sbjct: 131 LAYAFEFVA---TQTPENVSRERVLQVIARLGKALGAAGLVGGQVVDLDSEGKTDISLET 187 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + I KT AL+ + G I+A AS +RL + +N+G+ FQ+ DD+LD Sbjct: 188 LNFIHNHKTAALLEASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILD 240 >gi|260583700|ref|ZP_05851448.1| geranyltranstransferase [Granulicatella elegans ATCC 700633] gi|260158326|gb|EEW93394.1| geranyltranstransferase [Granulicatella elegans ATCC 700633] Length = 294 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 84/196 (42%), Positives = 110/196 (56%), Gaps = 5/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+ YA GGK+IR LV + L V L V A++E IH YSLIHDDLP MD Sbjct: 29 RLKEAMLYACSSGGKRIRPLLVLLISHLEEVELQKVLPVAASLEMIHTYSLIHDDLPGMD 88 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGK TVH Q+DE TAI+AG+ LLT FE ++ + QL D + + + L G Sbjct: 89 NDDYRRGKLTVHKQFDEATAILAGDALLTLTFEELA--QCQLSDAKKVRAIQVLGSASGA 146 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+ GQM DI E + T Q+ I KTG L+ A G ++ + +E L FG Sbjct: 147 SGMITGQMRDIASEHQEITLEQLKQIHADKTGQLLLAAIRLGLLVLEDATPYEEALLKFG 206 Query: 215 ENLGIIFQLADDLLDC 230 + G+ FQ+ +DL D Sbjct: 207 VHFGLAFQIQNDLQDV 222 >gi|228935501|ref|ZP_04098319.1| Geranyltranstransferase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824253|gb|EEM70067.1| Geranyltranstransferase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 296 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 83/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + L A+ Y+L GGK++R L+ F+ Sbjct: 10 KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLG 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 68 VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L G +GM+GGQ+ D++ E IDE + I K KTG Sbjct: 128 AYGQKEISAEKKVRLVLEFAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229 >gi|110802213|ref|YP_699103.1| geranyltranstransferase [Clostridium perfringens SM101] gi|110682714|gb|ABG86084.1| geranyltranstransferase [Clostridium perfringens SM101] Length = 290 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 119/202 (58%), Gaps = 7/202 (3%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++N L ++ Y++ +GGK+IR L+ ++ ++ L AIE IH YSLIHDDL Sbjct: 23 EYNKVLYDSMAYSVNVGGKRIRPILMLLSYYIYKSDYKKILTPAIAIEMIHTYSLIHDDL 82 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT H + E A++AG+ LL A +I+ L++ I + + Sbjct: 83 PCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVD--YSLEEGISALKATKIIA 140 Query: 153 N-IGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKE 208 + G GM+GGQ++DI +E +E + + M KTG L+ + SGAI+A AS+ + + Sbjct: 141 DAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGAILAEASERDIK 200 Query: 209 RLRCFGENLGIIFQLADDLLDC 230 +L FG LG+ FQ+ DD+LD Sbjct: 201 KLEDFGYKLGLAFQIKDDILDV 222 >gi|8272412|dbj|BAA96458.1| farnesyl diphosphate synthase [Rhodobacter capsulatus] Length = 288 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 85/227 (37%), Positives = 130/227 (57%), Gaps = 12/227 (5%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72 S+R+ + D + A+ + L A+ YA GGK++R+FL E A++ ++ A Sbjct: 3 SERLKEVQDGVEAAMAAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAIHGISMEQA 62 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + A+E +H YSL+HDD+P MDN +RRG PTVH ++DE TA++AG+ L T AFE+ + Sbjct: 63 MPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHRKWDEATAVLAGDALQTLAFELCT 122 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDETQVFMIQKMKTG 186 P +N R L+ +L G +GM+ GQ LDI E +DE + +Q KTG Sbjct: 123 DPVLGSAEN-RVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDE--IIRLQAGKTG 179 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 AL+ FA ++ A + ++ L + LG+ FQ+ADD+LD E D Sbjct: 180 ALISFAAQA---GAIIAGADRALLAAYATALGLAFQIADDILDVEGD 223 >gi|15672839|ref|NP_267013.1| farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis Il1403] gi|12723785|gb|AAK04955.1|AE006320_4 farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis Il1403] gi|326406404|gb|ADZ63475.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus lactis subsp. lactis CV56] Length = 285 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 82/219 (37%), Positives = 126/219 (57%), Gaps = 16/219 (7%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77 L+D L T + + L + +Y+LL GGK+IR L F++ A V A Sbjct: 8 LEDFL--TEFYESAEFPTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAA 65 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L F I+S+ Sbjct: 66 ALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFILSTA--- 122 Query: 138 LKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCF 191 ++ ++++++LT + G GM+ GQ+LD+ E + T ++ I ++KTG L+ F Sbjct: 123 ---DLSAEIIVALTRELAFASGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTF 179 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + I+A S +E E+LR G+ LG+ FQ+ DD+LD Sbjct: 180 PFVAAGIVAQKSTDEVEKLRQVGQILGLAFQIRDDILDV 218 >gi|110799631|ref|YP_696503.1| geranyltranstransferase [Clostridium perfringens ATCC 13124] gi|168210817|ref|ZP_02636442.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626] gi|182625644|ref|ZP_02953413.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721] gi|110674278|gb|ABG83265.1| geranyltranstransferase [Clostridium perfringens ATCC 13124] gi|170711106|gb|EDT23288.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626] gi|177909046|gb|EDT71521.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721] Length = 290 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 7/214 (3%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D L+ + ++N L ++ Y++ +GGK+IR L+ ++ ++ L AIE Sbjct: 11 DQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIE 70 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A +I+ L++ Sbjct: 71 MIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVD--YSLEE 128 Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESG 196 I + + + G GM+GGQ++DI +E +E + + M KTG L+ + SG Sbjct: 129 GISALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSG 188 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A++A AS+ + ++L FG LG+ FQ+ DD+LD Sbjct: 189 AVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDV 222 >gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] Length = 293 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 85/224 (37%), Positives = 126/224 (56%), Gaps = 9/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 K +D L+ L+ + Q H A+RY++ GGK++R L A +F V L A Sbjct: 10 KDVDEALERLIPAEDTFPQEIHR-----AVRYSVFAGGKRLRPLLTLAAAEIFGVPRLHA 64 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L AIE +H YSLIHDDLP++D+ RRG+ + H + + AI+AG+ LLT AFE ++ Sbjct: 65 LPAACAIEMVHTYSLIHDDLPALDDDDYRRGRLSNHKVFGDAMAILAGDSLLTLAFETLA 124 Query: 133 SPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 + T +L +L G+ GM+GGQ++D+ E ++ + I + KTGAL Sbjct: 125 AEATAYFAPATVVRLTEALGKAAGMSGMIGGQVVDLLSEGKQVNAATLDYIHRHKTGALF 184 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +SGAIM AS E +RL F +N+G+ FQ+ DD+LD D Sbjct: 185 TCCIKSGAIMGGASLEEMQRLTVFAQNIGLAFQIVDDILDITGD 228 >gi|281491351|ref|YP_003353331.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus lactis subsp. lactis KF147] gi|281375092|gb|ADA64610.1| Dimethylallyltransferase/geranyltranstransferase [Lactococcus lactis subsp. lactis KF147] Length = 285 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 82/219 (37%), Positives = 126/219 (57%), Gaps = 16/219 (7%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77 L+D L T + + L + +Y+LL GGK+IR L F++ A V A Sbjct: 8 LEDFL--TEFYESAEFPTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAA 65 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L F I+S+ Sbjct: 66 ALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFILSTA--- 122 Query: 138 LKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCF 191 ++ ++++++LT + G GM+ GQ+LD+ E + T ++ I ++KTG L+ F Sbjct: 123 ---DLSAEIIVALTRELAFASGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTF 179 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + I+A S +E E+LR G+ LG+ FQ+ DD+LD Sbjct: 180 PFVAAGIVAQKSTDEVEKLRQVGQILGLAFQIRDDILDV 218 >gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In Complex With Ggpp gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In Complex With Ggpp Length = 293 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 77/195 (39%), Positives = 107/195 (54%), Gaps = 7/195 (3%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A RY+LL GGK++R L L A A+E IH SLIHDDLP DN + Sbjct: 43 AXRYSLLAGGKRVRPVLCIAACELVGGEESLAXPAACAVEXIHTXSLIHDDLPCXDNDDL 102 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGM 159 RRGKPT H Y E A++AG+ LL++AFE ++S + R + + L IG +G+ Sbjct: 103 RRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGL 162 Query: 160 LGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ++DI E +D V + I KT AL+ + G I+ S E ERLR F Sbjct: 163 VAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFA 222 Query: 215 ENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 223 RCIGLLFQVVDDILD 237 >gi|52425115|ref|YP_088252.1| IspA protein [Mannheimia succiniciproducens MBEL55E] gi|52307167|gb|AAU37667.1| IspA protein [Mannheimia succiniciproducens MBEL55E] Length = 300 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 87/201 (43%), Positives = 121/201 (60%), Gaps = 6/201 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A++Y LL GGK+IR FLV + + AAIE IH YSLIHDDLP+MDN Sbjct: 37 LADAMKYGLLLGGKRIRPFLVYATGRMLGADTAQLDYAAAAIEAIHAYSLIHDDLPAMDN 96 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+PT HI +D TAI+AG+ L +AFEI++ T L + +L+ L+HN G+ Sbjct: 97 DSLRRGQPTCHIAFDHATAILAGDALQAFAFEILTK-STALSAEQKLRLIQVLSHNSGVF 155 Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKE-RLRCF 213 GM GQ LD+ E I +++ I + KTGAL+ A + G I +H + N E +L + Sbjct: 156 GMCLGQSLDLISEHKQISLSELEQIHRNKTGALLSAALKMGFICSSHFADNALEAKLDRY 215 Query: 214 GENLGIIFQLADDLLDCEEDL 234 +G+ FQ+ DD+LD E DL Sbjct: 216 AAAIGLAFQVQDDILDIEGDL 236 >gi|293571745|ref|ZP_06682764.1| geranyltranstransferase [Enterococcus faecium E980] gi|291608202|gb|EFF37505.1| geranyltranstransferase [Enterococcus faecium E980] Length = 296 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 29 SHMQTQHNDRLL-SAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCY 85 S + DR L A+ Y++ GGK+IR L+ + F+ + +V AA+E +H Y Sbjct: 20 SFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTY 79 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS L + + Sbjct: 80 SLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISM--AHLGHSPKLL 137 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ L G QGM+ GQ DI+ E + ++ I + KTG L+ +A +G I+A Sbjct: 138 LLQQLAVCAGAQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQP 197 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230 + L+ E+LG+ FQ+ DDLLD Sbjct: 198 EEILLLLQRLAEHLGLAFQIRDDLLDV 224 >gi|227113448|ref|ZP_03827104.1| geranyltranstransferase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 303 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 87/234 (37%), Positives = 132/234 (56%), Gaps = 14/234 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L + Q ++ + + DL Q++ L++A+ Y +LLGGK++R FLV Sbjct: 8 LNAHYQRTNRMLGHFIADLPFQSSP---------LVNAMEYGSLLGGKRLRPFLVYTTGE 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+ L Sbjct: 59 LFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDAL 118 Query: 124 LTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 T AF I++ +P Q+ D R ++ L H G+ GM GGQ D++ E +D + I Sbjct: 119 QTLAFSILADAPMPQVSDRDRLAMLSELAHASGVAGMCGGQAFDLEAEGHQVDLAALERI 178 Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTGAL+ A GA+ A ++ L + +G+ FQ+ DD+LD D Sbjct: 179 HRHKTGALIRAAVRLGALAAGETGRDALPHLDRYANAIGLAFQVQDDILDVVGD 232 >gi|152979918|ref|YP_001352020.1| geranyltranstransferase [Janthinobacterium sp. Marseille] gi|151279995|gb|ABR88405.1| geranyltranstransferase [Janthinobacterium sp. Marseille] Length = 280 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 8/206 (3%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 Q RL A+ YA+L GGK++R LV +LF+ + R AA+E IH YSL+HDD Sbjct: 13 AQTPARLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAVEMIHAYSLVHDD 72 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 +P MD+ +RRGKPTVH++YDE A++ G+ L + AF++++ D +R M+ L Sbjct: 73 MPCMDDDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGGL---DPVRQLAMVRLL 129 Query: 152 HNI-GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEK 207 G GM GGQ +D+ + + ++ + ++KTGAL+ + GA+ A S E Sbjct: 130 AKASGSLGMCGGQAIDLASVGLSLSLEELEQMHRLKTGALLRVSVLLGALAGKALSAEET 189 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 + L + +G+ FQ+ DD+LD D Sbjct: 190 QALDSYAAAIGLAFQVVDDVLDATAD 215 >gi|332992374|gb|AEF02429.1| geranyltranstransferase [Alteromonas sp. SN2] Length = 296 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 84/227 (37%), Positives = 129/227 (56%), Gaps = 14/227 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 Q+ ++T++DDL RL A+R+ALL GGK++R LV + +V Sbjct: 12 QQTDTSLNTLIDDL---------PHDAPRLKEAMRHALLVGGKRMRPLLVQVIGNTLDVP 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + AIEC+H YSL+HDDLP+MD+ +RRG+PT HI +DE TAI+AG+ L AF Sbjct: 63 KGDQMAISMAIECVHAYSLVHDDLPAMDDDDLRRGQPTCHIAFDEATAILAGDALQALAF 122 Query: 129 EIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185 ++ +P + N R +L+ L G +GM GGQ +D+ E I Q+ + +KT Sbjct: 123 STLADAPLSDFATNKRGELLSVLARAAGYRGMCGGQAIDLTSTGEEISLEQLKRLHNLKT 182 Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCE 231 GAL+ E +I++ N K L + +++G+ FQ+ DD+LD E Sbjct: 183 GALLRACVEMVSIVSQDLDSNSKADLLAYADDIGLAFQVQDDILDVE 229 >gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101] Length = 310 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 81/227 (35%), Positives = 124/227 (54%), Gaps = 14/227 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+ + +++ LD + + + L ++RY+LL GGK++R L L Sbjct: 23 LEASRLKVEAALD-------GSLGPERPESLRESMRYSLLAGGKRLRPILCLAACELAGG 75 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A+ A+E IH SLIHDDLP+MDN +RRG PT H Y E AI+AG+ LLT A Sbjct: 76 DSAQAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLTRA 135 Query: 128 FEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183 FE+++ SP + ++ LSL G G++GGQ++D++ E +D + I Sbjct: 136 FEMVALRSPGVPAEQLLKVVGELSLAS--GAPGLVGGQVVDLECEGKNVDLETLEYIHLH 193 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTGAL+ +GA++A A E LR + +G+ FQ+ DD+LD Sbjct: 194 KTGALLRACVLTGALIAGAPDALLEALRTYARGIGLAFQIIDDILDV 240 >gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus] Length = 300 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 118/204 (57%), Gaps = 16/204 (7%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+LGG K++R L + AA+E IH YSL+HDDLP MD Sbjct: 36 RLHQAMRYAVLGGGKRVRPLLCYAAGEVSGAELERLSTAAAALELIHVYSLVHDDLPCMD 95 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS------SPKTQLKDNIRSQLMLSL 150 + +RRGKPT H++YDE TA++AG+ L + AF++++ SP+TQL+ ++ L Sbjct: 96 DDVLRRGKPTCHVEYDEATALLAGDSLQSLAFQLLAEYRVADSPQTQLR------MLEHL 149 Query: 151 THNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEK 207 G +GM GGQ +D++ + + ++ + KTGAL+ + GA A + + Sbjct: 150 ARAAGSRGMAGGQAIDLEATGKTLTLPELEFMHIHKTGALIRASVILGANCGRALASKDM 209 Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231 +RL F + +G+ FQ+ DD+LD + Sbjct: 210 DRLDHFAKRIGLAFQVVDDVLDAQ 233 >gi|322372793|ref|ZP_08047329.1| geranyltranstransferase [Streptococcus sp. C150] gi|321277835|gb|EFX54904.1| geranyltranstransferase [Streptococcus sp. C150] Length = 290 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 120/201 (59%), Gaps = 6/201 (2%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSM 95 L+SAI Y++ GGK+IR + + F + + V A++E IH SLIHDDLP+M Sbjct: 25 ELISAILYSVDGGGKRIRPLIFLDLLEGFGLELTDSHFDVAASLEMIHTGSLIHDDLPAM 84 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN RRG T H ++DE TAI+AG+ L F++++ +T+L IR +L+ +L+H G Sbjct: 85 DNDDYRRGCLTNHKKFDEATAILAGDSLFLDPFDLLA--QTELSAEIRVELIQALSHASG 142 Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+GGQMLD++ E +D +Q+ I + KTG L+ F + I+A + L+ Sbjct: 143 TFGMVGGQMLDMKGEGQELDLSQLAQIHEHKTGKLLTFPFVAAGIVAQQGLEVLDNLQEA 202 Query: 214 GENLGIIFQLADDLLDCEEDL 234 G+ +G+ FQ+ DD+LD D Sbjct: 203 GQLIGLAFQVRDDILDVTADF 223 >gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum] Length = 365 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 114/199 (57%), Gaps = 3/199 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q ++ A+RY+LL GGK++R L + + A+ A+E IH SL+HDDL Sbjct: 97 QEPIKVHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAIPAACAVEMIHTMSLVHDDL 156 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT H + E TA++AG+ LL+ AFE +++ + Q + L Sbjct: 157 PCMDNDDLRRGKPTNHKIFGENTAVLAGDALLSLAFEHVATKTQNVPPQRVVQAIGELGS 216 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +G +G++ GQ++D+ E + T++ I KT L+ A GAIM ++ + ER+ Sbjct: 217 AVGSEGLVAGQIVDLASEGKQVSLTELEYIHHHKTSKLLEAAVVCGAIMGGGNEVDVERM 276 Query: 211 RCFGENLGIIFQLADDLLD 229 R + +G++FQ+ DD+LD Sbjct: 277 RSYARCIGLLFQVVDDILD 295 >gi|62959233|gb|AAY23724.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-435] Length = 145 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 93/145 (64%), Gaps = 2/145 (1%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP MD+ +R GKPT+H +DE TA++AG+ L AF+I++ P T R++L+ Sbjct: 1 HDDLPGMDDDELRHGKPTLHRAFDEATAVLAGDCLHALAFDILTQPDTSTDPFTRAELVA 60 Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 +L G +GM GGQM+DI +++ D QV +Q++KTGAL+ + E GA++ Sbjct: 61 TLARASGHEGMAGGQMMDIVSEEQAYDLRQVTRLQQLKTGALLAASVEMGAVLGRVPPEG 120 Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231 + LR + ++G+ FQ+ADD+LD E Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145 >gi|168214394|ref|ZP_02640019.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969] gi|168215448|ref|ZP_02641073.1| geranyltranstransferase [Clostridium perfringens NCTC 8239] gi|170714145|gb|EDT26327.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969] gi|182382163|gb|EDT79642.1| geranyltranstransferase [Clostridium perfringens NCTC 8239] Length = 290 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 124/214 (57%), Gaps = 7/214 (3%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D L+ + ++N L ++ Y++ +GGK+IR L+ ++ ++ L AIE Sbjct: 11 DQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIE 70 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLK 139 IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A +I + + K Sbjct: 71 MIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGK 130 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESG 196 +++ +++ G GM+GGQ++DI +E +E + + M KTG L+ + SG Sbjct: 131 SALKATKIIA--DAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSG 188 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A++A AS+ + ++L FG LG+ FQ+ DD+LD Sbjct: 189 AVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDV 222 >gi|167758090|ref|ZP_02430217.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704] gi|167663987|gb|EDS08117.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704] Length = 314 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 128/234 (54%), Gaps = 16/234 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + ++++ ++I+ IL + L + Q ++ A+ Y+LL GGK++R L+ E Sbjct: 21 MQAQMKHKVEKIEGILTEYLPR-----QEGFQSIIMEAMNYSLLAGGKRLRPMLMNETYR 75 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF AAIE IH YSL+HDDLP+MDN RRG+ T HI Y E I+AG+ L Sbjct: 76 LFGGESPLIRPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDAL 135 Query: 124 LTYAFE-----IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQ 176 L YAFE + P+ L + + + L G+ GM+GGQ++D+++ I + Sbjct: 136 LNYAFETAFKAFVMEPEESL---LIGRALGVLGEKAGIYGMIGGQVIDVKETGHSIPKEV 192 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + I ++KT AL+ + GAI+ AS+ E + + +GI FQ+ DD+LD Sbjct: 193 LDTIYELKTSALIEASMMVGAILGGASEEEVKIIEKIARYVGIAFQIQDDILDV 246 >gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus str. MIT 9202] gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus str. MIT 9202] Length = 300 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 116/199 (58%), Gaps = 3/199 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++ + L ++RY+LL GGK+IR L SL A+ AIE IH SLIHDDL Sbjct: 33 ENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGKPSLAVPTAVAIEMIHTMSLIHDDL 92 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN +RRG+PT H Y + AI+AG+ LLT AFE++S + ++ L+ Sbjct: 93 PAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVIGELSL 152 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G G++GGQ++D++ E +D + I KTGAL+ +GA++A A++ + L Sbjct: 153 VAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKACVRTGAMIAGANEKLLQAL 212 Query: 211 RCFGENLGIIFQLADDLLD 229 + E +G+ FQ+ DD+LD Sbjct: 213 TTYAEGIGLAFQIIDDILD 231 >gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215] gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215] Length = 300 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 116/199 (58%), Gaps = 3/199 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++ + L ++RY+LL GGK+IR L SL A+ AIE IH SLIHDDL Sbjct: 33 ENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDL 92 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN +RRG+PT H Y + AI+AG+ LLT AFE++S + ++ L+ Sbjct: 93 PAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVIGELSL 152 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G G++GGQ++D++ E +D + I KTGAL+ +GA++A A++ + L Sbjct: 153 VAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKACVRTGAMIAGANEKLLQAL 212 Query: 211 RCFGENLGIIFQLADDLLD 229 + E +G+ FQ+ DD+LD Sbjct: 213 TTYAEGIGLAFQIIDDILD 231 >gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032] gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032] Length = 296 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 80/197 (40%), Positives = 123/197 (62%), Gaps = 4/197 (2%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L S++ Y+L GGK++R LV + + N + VG A+E IH YSLIHDDLP MD+ Sbjct: 33 LKSSMLYSLKAGGKRLRPVLVLALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPCMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPT H Y E TA++AG+ LLT +F +I+S + + + + +++ L + G Sbjct: 93 DDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSSSVSADKKLRIVDELVKSAGA 152 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ D++ E + ++ I KTG L+ F+ +GA++A AS ++ E+LR F Sbjct: 153 LGMVGGQFDDMEAEQKQVSLAELEYIHARKTGKLLTFSVAAGAMLAGASDDDIEKLREFS 212 Query: 215 ENLGIIFQLADDLLDCE 231 ++GI FQ+ DD+LD E Sbjct: 213 YHIGIAFQIRDDILDLE 229 >gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum] Length = 366 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 73/192 (38%), Positives = 108/192 (56%), Gaps = 4/192 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + A+ A+E IH SLIHDDLP MDN + Sbjct: 105 AMRYSLLAGGKRVRPMLCLAACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDL 164 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H Y E A++AG+ LL +AFE I++ + + + L +IG +G++ Sbjct: 165 RRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIATATAGVSPSRILAAIGELAKSIGTEGLV 224 Query: 161 GGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ+ DI + + + I KT AL+ + GAI+ + E E+LR F + Sbjct: 225 AGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRIFARCI 284 Query: 218 GIIFQLADDLLD 229 G++FQ+ DD+LD Sbjct: 285 GLLFQVVDDILD 296 >gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313] gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313] Length = 306 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 81/230 (35%), Positives = 124/230 (53%), Gaps = 14/230 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 P+ L ++ LDD + + ++L A+RY+LL GGK++R L Sbjct: 17 FPAYLAAAKASVEEALDD-------SLGPERPEQLREAMRYSLLAGGKRLRPILCLAACE 69 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AL A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ L Sbjct: 70 LAGGEPAEALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDAL 129 Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LT +FE+++ SP + ++ LSL G G++GGQ++D++ E +D + Sbjct: 130 LTRSFEMVALRSPGVPPERLLKVVGELSLVA--GAPGLVGGQVVDLECEGKEVDLETLEF 187 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I KTGAL+ GA++ A + + LR + +G+ FQ+ DD+LD Sbjct: 188 IHLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILD 237 >gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota] Length = 367 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 80/224 (35%), Positives = 122/224 (54%), Gaps = 10/224 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 ++ + K+I+ LD+ + Q + A+RY+LL GGK++R L L Sbjct: 80 MKTSGKKINKALDEAV-------PVQKPAIIHEAMRYSLLAGGKRVRPVLCIASCELVGG 132 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+ + A+E IH SLIHDDLP MDN +RRGKPT H Y E TAI+AG+ LL+ A Sbjct: 133 LESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGDALLSLA 192 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKT 185 FE ++ + + + L +G QG++ GQ++DI Q + +D + I KT Sbjct: 193 FEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEYIHVHKT 252 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ + GAI+ + E ERLR + +G++FQ+ DD+LD Sbjct: 253 SKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILD 296 >gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Bacillus pumilus ATCC 7061] gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Bacillus pumilus ATCC 7061] Length = 296 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 80/197 (40%), Positives = 123/197 (62%), Gaps = 4/197 (2%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L S++ Y+L GGK++R LV + + N + VG A+E IH YSLIHDDLP MD+ Sbjct: 33 LKSSMLYSLKAGGKRLRPVLVLALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPCMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPT H Y E TA++AG+ LLT +F +I+S + + + + +++ L + G Sbjct: 93 DDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSSSVSADKKLRIVDELVKSAGA 152 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ D++ E + ++ I KTG L+ F+ +GA++A AS ++ E+LR F Sbjct: 153 LGMVGGQFDDMEAEQKQVSLAELESIHARKTGKLLTFSVAAGAMLAGASDDDIEKLREFS 212 Query: 215 ENLGIIFQLADDLLDCE 231 ++GI FQ+ DD+LD E Sbjct: 213 YHIGIAFQIRDDILDLE 229 >gi|296159644|ref|ZP_06842467.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1] gi|295890088|gb|EFG69883.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1] Length = 293 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 81/224 (36%), Positives = 120/224 (53%), Gaps = 11/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R++T L+ L A+ T H A+RYA+LGG K++R L L Sbjct: 12 ERVETALEHYLPGEATEPATLHE-----AMRYAVLGGGKRVRPLLCHAAGELTGARAECL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L + AF ++ Sbjct: 67 DAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVALT 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190 S L ++ L+ L G GM GGQ +D+ + TQ+ + +MKTGAL+ Sbjct: 127 S--EVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLR 184 Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 A GA+ + R L + +G+ FQ+ DD+LD D Sbjct: 185 AAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTD 228 >gi|254191045|ref|ZP_04897550.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237] gi|254301703|ref|ZP_04969146.1| geranyltranstransferase [Burkholderia pseudomallei 406e] gi|157811595|gb|EDO88765.1| geranyltranstransferase [Burkholderia pseudomallei 406e] gi|157938718|gb|EDO94388.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237] Length = 362 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 113/199 (56%), Gaps = 9/199 (4%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +A+RYA+ GG K++R L L + + +V A IE IH +SLI DDLP+MDN Sbjct: 98 LHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIHVFSLIQDDLPAMDN 157 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +R G+ T+H QYD TA++A +GL++ AF +S + L ++R LM L +IG Sbjct: 158 DDLRHGRLTLHKQYDVATALLASDGLISQAFLALS--EAPLPLDVRVALMRELASSIGPS 215 Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE----KERLR 211 G+ GGQ +D+ +D T++ + +MKTGAL+ A G + E + Sbjct: 216 GLTGGQYIDLTSIGAHLDRTELEQMHRMKTGALIRAAVRMGVLCGTVPGAELGAAWRAVS 275 Query: 212 CFGENLGIIFQLADDLLDC 230 +GE LG+ +Q+ DD+LD Sbjct: 276 EYGERLGLAYQVVDDILDS 294 >gi|292659826|pdb|3M0G|A Chain A, Crystal Structure Of Putative Farnesyl Diphosphate Synthase From Rhodobacter Capsulatus gi|292659827|pdb|3M0G|B Chain B, Crystal Structure Of Putative Farnesyl Diphosphate Synthase From Rhodobacter Capsulatus Length = 297 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 85/225 (37%), Positives = 127/225 (56%), Gaps = 12/225 (5%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72 S+R+ + D + A+ + L A YA GGK++R+FL E A++ ++ A Sbjct: 4 SERLKEVQDAVETAXAAAIGRLPAGDLRDAXAYAAQGGKRLRAFLAIESAAIHGISXAQA 63 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 A+E +H YSL+HDD P DN +RRG PTVH ++D+ TA++AG+ L T AFE+ + Sbjct: 64 XPAALAVEALHAYSLVHDDXPCXDNDDLRRGLPTVHKKWDDATAVLAGDALQTLAFELCT 123 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDETQVFMIQKMKTG 186 P +N R L+ +L G +G + GQ LDI E +DE + +Q KTG Sbjct: 124 DPVLGSAEN-RVALVAALAQASGAEGXVYGQALDIAAETAAVPLTLDE--IIRLQAGKTG 180 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 AL+ FA ++GAI+A A + L + LG+ FQ+ADD+LD E Sbjct: 181 ALISFAAQAGAILAGADRGP---LTAYATALGLAFQIADDILDVE 222 >gi|257899149|ref|ZP_05678802.1| polyprenyl synthetase [Enterococcus faecium Com15] gi|257837061|gb|EEV62135.1| polyprenyl synthetase [Enterococcus faecium Com15] Length = 296 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 29 SHMQTQHNDRLL-SAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCY 85 S + DR L A+ Y++ GGK+IR L+ + F+ + +V AA+E +H Y Sbjct: 20 SFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTY 79 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS L + + Sbjct: 80 SLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISM--AHLGHSPKLL 137 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ L G QGM+ GQ DI+ E + ++ I + KTG L+ +A +G I+A Sbjct: 138 LLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQP 197 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230 + L+ E+LG+ FQ+ DDLLD Sbjct: 198 EEILLLLQRLAEHLGLAFQIRDDLLDV 224 >gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota subsp. sativus] Length = 367 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 80/224 (35%), Positives = 122/224 (54%), Gaps = 10/224 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 ++ + K+I+ LD+ + Q + A+RY+LL GGK++R L L Sbjct: 80 MKTSGKKINKALDEAV-------PVQKPAIIHEAMRYSLLAGGKRVRPVLCIASCELVGG 132 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+ + A+E IH SLIHDDLP MDN +RRGKPT H Y E TAI+AG+ LL+ A Sbjct: 133 LESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGDALLSLA 192 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKT 185 FE ++ + + + L +G QG++ GQ++DI Q + +D + I KT Sbjct: 193 FEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEYIHVHKT 252 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ + GAI+ + E ERLR + +G++FQ+ DD+LD Sbjct: 253 SKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILD 296 >gi|323464391|gb|ADX76544.1| geranyltranstransferase [Staphylococcus pseudintermedius ED99] Length = 296 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 94/230 (40%), Positives = 134/230 (58%), Gaps = 18/230 (7%) Query: 14 KRIDTILDDLLLQTASHMQ-----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 K ++ L++LL Q H+ +Q L ++RY+L GGK+IR L+ + + Sbjct: 2 KVMNQNLNELLEQFNGHLNHAIEDSQLGTSLEQSMRYSLEAGGKRIRPLLMLATIKMLDH 61 Query: 68 NHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 L + + V A+E IH YSLIHDDLP+MD+ +RRGKPT H Y E AI+AG+ LLT Sbjct: 62 QKLESGMHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTVYGEWLAILAGDALLTK 121 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF--IDETQVFMI 180 AFE I+ L +I +Q+ ++L I G QGM+GGQ LD+Q E I ++ I Sbjct: 122 AFEKIA-----LTPHIDAQIKVALIEKISQASGHQGMVGGQTLDMQSENQQISLEKLESI 176 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTGAL+ FA E+ I+ Q ++L F ++LG+IFQ+ DDLLD Sbjct: 177 HIHKTGALIQFAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKDDLLDV 226 >gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A] gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A] Length = 299 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 79/226 (34%), Positives = 124/226 (54%), Gaps = 14/226 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L++ R++ LD + + + ++L ++RY+LL GGK++R L L Sbjct: 14 LEKARTRVEDALD-------ASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELAGG 66 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AL A+E IH SLIHDDLPSMDN +RRG+PT H Y + AI+AG+ LLT A Sbjct: 67 ELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRA 126 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKT 185 FE++S + +++ L+ G G++GGQ++D+ + + +D + I KT Sbjct: 127 FEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLHKT 186 Query: 186 GALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GAL+ C C GA++ A + E L + +G+ FQ+ DD+LD Sbjct: 187 GALLKACVTC--GALIGGADEKLLEALSIYARGIGLAFQIIDDILD 230 >gi|327398343|ref|YP_004339212.1| Farnesyltranstransferase [Hippea maritima DSM 10411] gi|327180972|gb|AEA33153.1| Farnesyltranstransferase [Hippea maritima DSM 10411] Length = 291 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 111/198 (56%), Gaps = 11/198 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR+ LV A +F + +L + +AIE +H YSLIHDDLP MDN RRGKP H Sbjct: 40 GGKRIRAMLVMCAADMFGADETKSLHIASAIELMHAYSLIHDDLPVMDNDDFRRGKPANH 99 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 Y E A++ G+GL TY F +I+ + D + +++ L++N G+ GM+ GQ++D+ Sbjct: 100 KVYGEDLALLVGDGLNTYTFNVIAD--APIDDARKVKIVKWLSNNAGIGGMVVGQVVDVL 157 Query: 168 --QDEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 +D + V I K KT L+ + GAI + + +RL +G G+ FQ Sbjct: 158 SSRDRLKGHSHKKLVNFIHKHKTAKLIQASVVCGAICGNPDDVQLDRLAKYGLYAGVAFQ 217 Query: 223 LADDLLDC---EEDLPKK 237 + DD LD EE L KK Sbjct: 218 IIDDYLDVVGDEEKLGKK 235 >gi|323700415|ref|ZP_08112327.1| Polyprenyl synthetase [Desulfovibrio sp. ND132] gi|323460347|gb|EGB16212.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132] Length = 297 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 124/196 (63%), Gaps = 14/196 (7%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RLL+++ Y+LL GGK++R LV L + A+ A++ECIH YSLIHDDLP+MD Sbjct: 30 RLLASMEYSLLAGGKRLRPVLVLAWNGLLGGDADKAMPFAASMECIHTYSLIHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS----LTH 152 + +RRG+P+ H Q+DE TAI+AG+GLLT AF +++ +T L + ++ +L L Sbjct: 90 DDDLRRGRPSNHKQFDEATAILAGDGLLTEAFVLMT--ETCLVKGLPAERVLRAIAVLAR 147 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEK 207 G GM+GGQ +D+ E T V + + MKTGAL+ ACE GAI+A A++++ Sbjct: 148 AAGSGGMVGGQAVDM--ELTGRTGVPLDELKKMHAMKTGALLTAACECGAILAGAAESDV 205 Query: 208 ERLRCFGENLGIIFQL 223 + R FG +G+ FQ+ Sbjct: 206 DNARRFGRKIGVAFQI 221 >gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] Length = 299 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 119/215 (55%), Gaps = 10/215 (4%) Query: 26 QTASHM-QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 Q A +M Q + RL A+RY LLGG K+IR L A AL A+E IH Sbjct: 23 QLADYMDQASASQRLQDAMRYGLLGGGKRIRPALCLAAAEAVGGQRQIALAPACALEMIH 82 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSL+HDDLP+MDN +RRG+ T HI +DE +AI+AG+ L AF ++++ +L ++ Sbjct: 83 AYSLMHDDLPAMDNDDLRRGRATAHIAFDESSAILAGDALQAEAFRVLAT-APRLSAEVK 141 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIM 199 ++ +L + G GM+GGQ +D+ E + T Q+ + + KTGAL+ + GA+ Sbjct: 142 LAMVKALANACGANGMVGGQAIDL--ESVARTLTLDQLENMHRHKTGALIEASVHLGALA 199 Query: 200 AHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 + L + LG+ FQ+ DDLLD E D Sbjct: 200 GGVKDPALLDALARYARALGLAFQVQDDLLDIEGD 234 >gi|73654130|gb|AAZ79360.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-378] Length = 145 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 93/145 (64%), Gaps = 2/145 (1%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP MD+ +R GKPT+H +DE TA++AG+ L AF+I++ P T R++L+ Sbjct: 1 HDDLPWMDDDELRHGKPTLHRAFDEATAVLAGDCLHALAFDILTQPDTSTDPFTRAELVA 60 Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 +L G +GM GGQM+DI +++ D QV +Q++KTGAL+ + E GA++ Sbjct: 61 TLARASGHEGMAGGQMMDIVSEEQAYDLRQVTRLQQLKTGALLAASVEMGAVLGRVPPEG 120 Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231 + LR + ++G+ FQ+ADD+LD E Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145 >gi|148976608|ref|ZP_01813295.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium SWAT-3] gi|145963959|gb|EDK29217.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium SWAT-3] Length = 294 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 78/200 (39%), Positives = 113/200 (56%), Gaps = 5/200 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N L++A+RY LL GGK+ R FLV + +A+ECIH YSLIHDDLP Sbjct: 26 QNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPASAVECIHAYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTH 152 +MD+ +RRG T HI++DE TAI+ G+ L T AF I++ ++ R +++ L Sbjct: 86 AMDDDELRRGHQTCHIKFDEATAILTGDALQTLAFTILAEGTLSADGESNRVRMIQRLAE 145 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209 G QGM GQ LDI+ E + ++ + + KTGALM A GA+ A E + Sbjct: 146 ASGAQGMCIGQALDIEAENRAVTLKELEEVHRNKTGALMKSAIRLGALAAGEKAFEVLPQ 205 Query: 210 LRCFGENLGIIFQLADDLLD 229 L + + +G+ FQ+ DD+LD Sbjct: 206 LDKYADAIGLAFQVQDDILD 225 >gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum V4] gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum V4] Length = 300 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 76/191 (39%), Positives = 106/191 (55%), Gaps = 3/191 (1%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 AI Y L GGK++R L A N AL + A+ECIH YSL+HDDLPSMDN Sbjct: 41 AIDYCLFSGGKRLRPILCLAGAHAVCRNSDCALPMACAVECIHTYSLVHDDLPSMDNDDF 100 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKP++H Y E AI+ G+ LL AFE+ S + SQ++ L G + ++ Sbjct: 101 RRGKPSLHKIYGEALAILTGDALLALAFEVASLCSPLGRTYPVSQMIWELARTAGSRALV 160 Query: 161 GGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GQ+ D++ E I TQ+ I KT AL+ + GA+ A A + + + +G LG Sbjct: 161 AGQVADLEAEGKEIGLTQLRYIHCRKTAALITTSLRLGAMAADADKKTLDLITRYGRALG 220 Query: 219 IIFQLADDLLD 229 + FQ+ DD+LD Sbjct: 221 LAFQIIDDILD 231 >gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis] Length = 381 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 115/202 (56%), Gaps = 7/202 (3%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++ ++ ++RY+LL GGK++R L L A+ AIE IH SL+HDDL Sbjct: 111 RYPQKIYESMRYSLLAGGKRVRPVLCIAACELVGGTEELAIPTACAIEMIHTMSLMHDDL 170 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSL 150 P +DN +RRGKPT H + E TA+ AGN L +YAFE +S+ KT D I +++ L Sbjct: 171 PCIDNDDLRRGKPTNHKIFGEDTAVTAGNALHSYAFEHIAVSTSKTVGADRIL-RMVSEL 229 Query: 151 THNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 G +G++GGQM+DI D ID + I KT L+ + GAI+ AS+ Sbjct: 230 GRATGSEGVMGGQMVDIASEGDPSIDLQTLEWIHIHKTAMLLECSVVCGAIIGGASEIVI 289 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 ER R + +G++FQ+ DD+LD Sbjct: 290 ERARRYARCVGLLFQVVDDILD 311 >gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514] gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561] gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513] gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514] gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561] gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513] Length = 294 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 121/209 (57%), Gaps = 12/209 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + A+RY++ GGK++R L L + AL V AIE IH YSLIHDDLP+MDN Sbjct: 30 IYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAMDN 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--- 154 +RRGKPT H Y E AI+AG+GLL +E++ + ++ + +L T+ I Sbjct: 90 DDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDY--ERILKATNEIATA 147 Query: 155 -GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G +G++GGQ++DI Q+ + ++ I + KT AL+ + +GA +A A++ + LR Sbjct: 148 SGCKGIIGGQVVDILSQNTKLTYEELKFIHEHKTAALIEASVCAGAYIAGATEEDVHALR 207 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 + +G FQ+ DD+LD EE L KK Sbjct: 208 EYARLIGFAFQIKDDILDVIGEEEKLGKK 236 >gi|168206126|ref|ZP_02632131.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987] gi|170662394|gb|EDT15077.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987] Length = 290 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 124/214 (57%), Gaps = 7/214 (3%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D L+ + ++N L ++ Y++ +GGK+IR L+ ++ ++ L AIE Sbjct: 11 DQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIE 70 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLK 139 IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A ++ + + K Sbjct: 71 MIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVLVDYSLEEGK 130 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESG 196 +++ +++ G GM+GGQ++DI +E +E + + M KTG L+ + SG Sbjct: 131 SALKATKIIA--DAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSG 188 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A++A AS+ + ++L FG LG+ FQ+ DD+LD Sbjct: 189 AVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDV 222 >gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9] gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9] Length = 309 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 114/200 (57%), Gaps = 5/200 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + +++ A+RY+LL GGK++R L + A+ A+E IH SLIHDDLP Sbjct: 41 YPEKIYEAMRYSLLAGGKRVRPILCLATCEMIGGTIGMAMPTACAMEMIHTMSLIHDDLP 100 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTH 152 +MDN RRGK T H Y E AI+AG+GLL +FE +++ Q R+ Q++ + Sbjct: 101 AMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALSFEFVATQTPQTVPPDRTLQVIARMGS 160 Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G G++GGQ++D+ E I + I KT AL+ + G I+A AS + ++ Sbjct: 161 ASGAPGLVGGQVVDLASEGQSNISLETLNFIHNHKTAALLEASVVCGGIIAGASPQDIQK 220 Query: 210 LRCFGENLGIIFQLADDLLD 229 L C+ +N+G+ FQ+ DD+LD Sbjct: 221 LTCYSQNIGLAFQIIDDILD 240 >gi|260220841|emb|CBA28811.1| Probable geranyltranstransferase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 341 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 115/202 (56%), Gaps = 7/202 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 L+ A+RYA+L GGK++R LV A L + ALR A+E IH YSL+HDD+P Sbjct: 74 LVDAMRYAVLDGGKRLRPLLVLAAHEAVAELGHGCDAAALRAACAVELIHAYSLVHDDMP 133 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MDN +RRGKPTVH+Q+ E +A++AG+ L AFE ++ + ++++L L Sbjct: 134 CMDNDVLRRGKPTVHVQFGEASALLAGDALQALAFEFLTPLDGSVPCTVQARLCGLLARA 193 Query: 154 IGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM GGQ +D+ + E Q+ + ++KTGAL+ + GA A + L Sbjct: 194 AGSSGMAGGQAIDLASVGLPLTENQLREMHQLKTGALLQGSVVMGAQCAQPTAQVLSGLE 253 Query: 212 CFGENLGIIFQLADDLLDCEED 233 +G +G+ FQ+ DD+LD D Sbjct: 254 AYGAAIGLAFQVVDDILDVTAD 275 >gi|163781563|ref|ZP_02176563.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp. 128-5-R1-1] gi|159882783|gb|EDP76287.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp. 128-5-R1-1] Length = 266 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 89/223 (39%), Positives = 123/223 (55%), Gaps = 25/223 (11%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 RI+ L +LL+ Q L A+ Y L GK++R L AS + A+ Sbjct: 10 RIEDRLRELLV-------PQQPQELFEAMAYYLFQPGKRVRPLLTVAVASSLGGDEEDAI 62 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 VG AIE IH YSLIHDDLP+MDN RRG P+ H ++ E A++AG+ LLTYAFE++S Sbjct: 63 TVGCAIEMIHNYSLIHDDLPAMDNDDFRRGLPSCHRKFGEAMAVLAGDALLTYAFELMS- 121 Query: 134 PKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDI-QDEFIDETQVFMIQKMKTGAL 188 K + + + ++ L + I G+ GM+GGQ LDI +E ++E + KT AL Sbjct: 122 -KEGVFRTLSPEEVVKLINTIAVKSGIGGMVGGQALDIGGEENLEEVNL-----KKTAAL 175 Query: 189 M--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 CF SG I++H KE L G G++FQL DD+LD Sbjct: 176 FEACFI--SGGIVSHRGDLFKE-LEEVGREFGLLFQLVDDILD 215 >gi|119472098|ref|ZP_01614329.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Alteromonadales bacterium TW-7] gi|119445118|gb|EAW26411.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Alteromonadales bacterium TW-7] Length = 295 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 81/196 (41%), Positives = 116/196 (59%), Gaps = 4/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A Y+L GGK++R FLV + + AAIECIH YSL+HDDLP+MD+ + Sbjct: 35 ATHYSLFNGGKRLRPFLVYAVGEMLGAKKSDLDVLAAAIECIHSYSLVHDDLPAMDDDDL 94 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG PT HI Y E AI+AG+ L T AFE+I++ + +++ +L H G++GM+ Sbjct: 95 RRGYPTCHIVYGEAQAILAGDALQTLAFELIATHNFNCSAQSQVKMIAALAHASGIEGMV 154 Query: 161 GGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENL 217 GQ LDI D+ + ++ I K+KTGAL+ A GA+ + A + E L FG + Sbjct: 155 AGQGLDIAATDKVVSVQELERIHKLKTGALINCAITLGALCSEKADEQTLENLSVFGYAI 214 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LD E D Sbjct: 215 GLAFQVHDDILDVEGD 230 >gi|73662542|ref|YP_301323.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495057|dbj|BAE18378.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 295 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 82/206 (39%), Positives = 112/206 (54%), Gaps = 6/206 (2%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L ++RY+L GGK+IR L+ + + A+E IH YSLIHDDLP Sbjct: 27 NTNLEESMRYSLEAGGKRIRPVLLLLTLEMLTDQYKKGFSSALALEMIHTYSLIHDDLPP 86 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGK T H + E AI+AG+ LLT AF++I + + L D + +L+ L+ Sbjct: 87 MDNDDYRRGKLTNHKVFGEWKAILAGDALLTKAFDMIVNDDS-LNDVAKVKLIKRLSFAS 145 Query: 155 GLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G GM+GGQ LD+Q E ID + I KTGAL+ FA + +A L Sbjct: 146 GHLGMVGGQTLDMQSEGAETNIDLDTLEKIHNAKTGALLKFAVMAAVDIAEPENEVSNAL 205 Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236 + E+LG++FQ+ DDLLD D K Sbjct: 206 ESYSEHLGLMFQIKDDLLDIYGDEAK 231 >gi|99082761|ref|YP_614915.1| farnesyl-diphosphate synthase [Ruegeria sp. TM1040] gi|99039041|gb|ABF65653.1| farnesyl-diphosphate synthase [Ruegeria sp. TM1040] Length = 287 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 92/223 (41%), Positives = 133/223 (59%), Gaps = 22/223 (9%) Query: 27 TASHMQTQ-----HNDRLLS-------AIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74 TA+ +Q Q H DR L A+ YAL GGK +R FLV E A L +V A+ Sbjct: 6 TAALLQAQTQILNHMDRRLPQADLLHQAMDYALRGGKMLRGFLVLESARLHDVPETAAIE 65 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 AIECIH YSL+HDDLP+MD+ +RRG+PT+H ++DE TA++AG+ L T AFE+++ Sbjct: 66 AALAIECIHAYSLVHDDLPAMDDDDLRRGQPTLHRKWDEATAVLAGDSLQTLAFELLA-- 123 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMC 190 + + N S L+ +L G GM+ GQM+DI E + ++ +Q KTG L+ Sbjct: 124 RDSVGPNALS-LIRTLAQAAGKDGMVSGQMMDIAAETAETPLTLDEITTLQARKTGCLIE 182 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ +GA +A A + LR + + LG+ FQ+ADD+LD E D Sbjct: 183 WSACAGARLAGA---DPAPLRHYAQALGLAFQIADDILDVEGD 222 >gi|329116734|ref|ZP_08245451.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020] gi|326907139|gb|EGE54053.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020] Length = 289 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 88/224 (39%), Positives = 124/224 (55%), Gaps = 18/224 (8%) Query: 26 QTASHMQTQHN---DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA--LRVGAAI 79 QT SH + N L+ +I Y++ GGK+IR + E FN+ LT +V AA+ Sbjct: 9 QTISHFYQKSNLVSQDLIDSIIYSVDSGGKRIRPLFLLESLEAFNIT-LTEDHFKVAAAL 67 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SLIHDDLP+MDN RRG+ T H Q+DE TAI+AG+ L F +I+ +T Sbjct: 68 EMVHTGSLIHDDLPAMDNDEYRRGRLTNHKQFDEATAILAGDSLFIDPFSLIA--ETNFL 125 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACES 195 ++ L+ L++ G GM+GGQMLD++ E I+E Q I KTG L+ + + Sbjct: 126 PQVKVDLIAQLSNAAGTFGMVGGQMLDMRAEDQKLGIEELQ--GIHSHKTGKLLAYPFMA 183 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 AI+A + L GE +G FQ+ DD+LD EDL K Sbjct: 184 AAIIAQLPADMISDLTRAGELIGHAFQVRDDILDITAKFEDLGK 227 >gi|227327511|ref|ZP_03831535.1| geranyltranstransferase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 303 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 82/200 (41%), Positives = 120/200 (60%), Gaps = 5/200 (2%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++A+ Y +LLGGK++R FLV LF ++ + AA+ECIH YSLIHDDLP+MD+ Sbjct: 33 LVNAMEYGSLLGGKRLRPFLVYTTGELFGMSLESLDAPAAAVECIHAYSLIHDDLPAMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E AI+AG+ L T AF I++ +P Q+ D R ++ L H G+ Sbjct: 93 DDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPQVSDRDRLAMISELAHASGV 152 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213 GM GGQ D++ E +D + I + KTGAL+ A GA+ A + L + Sbjct: 153 AGMCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGALAAGETGRAALPHLDRY 212 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 213 ANAIGLAFQVQDDILDVVGD 232 >gi|90408168|ref|ZP_01216336.1| geranyltranstransferase [Psychromonas sp. CNPT3] gi|90310698|gb|EAS38815.1| geranyltranstransferase [Psychromonas sp. CNPT3] Length = 296 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 80/229 (34%), Positives = 124/229 (54%), Gaps = 18/229 (7%) Query: 23 LLLQTASHMQTQHNDRLLSAIRY---------------ALLGGKKIRSFLVTECASLFNV 67 LLL+T S Q++ + +L I ALLGGK+IR FLV + Sbjct: 3 LLLKTLSQYQSRTDQQLTKYIDLQSPLCLSLNKAMYHGALLGGKRIRPFLVYVVGDMLGS 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T + A+EC+H YSLIHDDLP+MD+ +RRG+ T HI + E AI+AG+ L + A Sbjct: 63 QLSTLDPIACALECMHAYSLIHDDLPAMDDDALRRGQATCHIVFGEAQAILAGDALQSLA 122 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKT 185 F+I+S +L + + +++ L G +GM GQ LD+ +++ +D T + I + KT Sbjct: 123 FDILSQENKELSCSAQLKMLNVLAKASGDKGMCAGQALDLAAENKRVDLTMLESIHRAKT 182 Query: 186 GALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ A E + ++ K+ L + +G+ FQ+ DD+LD D Sbjct: 183 GALIQAAVELATLTKVGLDSQHKQYLLTYARAIGLAFQVQDDILDITSD 231 >gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303] gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303] Length = 306 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 10/228 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 P+ L ++ LDD + + ++L A+RY+LL GGK++R L Sbjct: 17 FPAYLAAAKASVEEALDD-------SLGPERPEQLREAMRYSLLAGGKRLRPILCIAACE 69 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AL A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ L Sbjct: 70 LAGGEPTQALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDAL 129 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT +FE+++ + +++ L+ G G++GGQ++D++ E +D + I Sbjct: 130 LTRSFEMVALRSKGVAPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFIH 189 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ GA++ A + + LR + +G+ FQ+ DD+LD Sbjct: 190 LHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILD 237 >gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus] Length = 369 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 4/192 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + A+ A+E IH SLIHDDLP MDN + Sbjct: 108 AMRYSLLAGGKRVRPVLCLSACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDL 167 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H + E A++AG+ LL YAFE ++ + + + L +IG +G++ Sbjct: 168 RRGKPTNHKVFGEDVAVLAGDALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLV 227 Query: 161 GGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ++DI E + Q+ I KT AL+ + GAI+ + + E LR F + Sbjct: 228 AGQVVDIDSEGLANVGLEQLEFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCI 287 Query: 218 GIIFQLADDLLD 229 G++FQ DD+LD Sbjct: 288 GLLFQAVDDILD 299 >gi|154686692|ref|YP_001421853.1| YqiD [Bacillus amyloliquefaciens FZB42] gi|154352543|gb|ABS74622.1| YqiD [Bacillus amyloliquefaciens FZB42] Length = 296 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/186 (40%), Positives = 117/186 (62%), Gaps = 3/186 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V + + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H Sbjct: 44 GGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + E A++AG+GLLT +F++I+S ++ + R +L+ L G +GM+GGQ D+ Sbjct: 104 KVFGEAAAVLAGDGLLTESFKLITSHVSEAVSAEKRLRLVDELISAAGTEGMVGGQAADM 163 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + E I ++ I + KT L+ F+ +GAI+A A ++E E+LR F ++GI FQ+ D Sbjct: 164 EAEQKRITLEELESIHERKTAKLLGFSVTAGAILADAPEDEVEKLRLFSSHIGIGFQIRD 223 Query: 226 DLLDCE 231 D+LD E Sbjct: 224 DILDIE 229 >gi|238760656|ref|ZP_04621781.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236] gi|238701121|gb|EEP93713.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236] Length = 306 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/200 (42%), Positives = 119/200 (59%), Gaps = 7/200 (3%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L+ A+RY A+LGGK++R +LV +F ++ AAIECIH YSLIHDDLP+ Sbjct: 36 NSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGLSPTNLDAPAAAIECIHAYSLIHDDLPA 95 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153 MD+ +RRG+PT H+++ E AI+AG+ L T AF I++ +P + D R ++ L H Sbjct: 96 MDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAQAPMPDVADKDRLSMIAELAHA 155 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE--R 209 G+ GM GGQ LD++ E I + I + KTGAL+ A GA A Q K Sbjct: 156 SGVAGMCGGQALDLEAEARQISLEDLERIHRHKTGALIRAAVRLGAFAA-GEQGRKALTL 214 Query: 210 LRCFGENLGIIFQLADDLLD 229 L + E +G+ FQ+ DD+LD Sbjct: 215 LDRYSEAIGLAFQVQDDILD 234 >gi|34763574|ref|ZP_00144509.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl pyrophosphate synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886763|gb|EAA23901.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl pyrophosphate synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 297 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 4/204 (1%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + + + + + YA L GGK++R FL+ L N N ++ A+E IH YSL+HD Sbjct: 25 ELSYPETIAKGMEYATLNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP++DN RRGK T H + E I+ G+ LLTYAF ++S +L + + ++S Sbjct: 85 DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNIISK 144 Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 T G+ GM+GGQM+DI+ E I + I KTG L+ E I+A ++++ Sbjct: 145 TSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKTGKLIKLPIEIACIIADLEKDKR 204 Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231 + L + + +G+ FQ+ DD+LD E Sbjct: 205 KVLEEYADLIGLAFQVKDDILDVE 228 >gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana] Length = 373 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 110/196 (56%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ A+RY+LL GGK++R L L A+ ++E IH SLIHDDLP MD Sbjct: 108 KIHEAMRYSLLAGGKRVRPMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMD 167 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H + E A++AG+ LL ++FE I+ + + + L +IG Sbjct: 168 NDDLRRGKPTNHKVFGEDVAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGA 227 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E + + + I KT AL+ A GAI+ S E E+LR F Sbjct: 228 EGLVAGQVVDICSEGLSDVGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNF 287 Query: 214 GENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 288 ARYIGLLFQVVDDILD 303 >gi|226198039|ref|ZP_03793611.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9] gi|225929915|gb|EEH25930.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9] Length = 344 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 113/198 (57%), Gaps = 9/198 (4%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +A+RYA+ GG K++R L L + + +V A IE IH +SLI DDLP+MDN Sbjct: 80 LHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIHVFSLIQDDLPAMDN 139 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +R G+ T+H QYD TA++A +GL++ AF +S + L ++R LM L +IG Sbjct: 140 DDLRHGRLTLHKQYDVATALLASDGLISQAFLALS--EAPLPLDVRVALMRELASSIGPS 197 Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE----KERLR 211 G+ GGQ +D+ +D T++ + +MKTGAL+ A G + E + Sbjct: 198 GLTGGQYIDLTSIGAHLDRTELEQMHRMKTGALIRAAVRMGVLCGTVPGAELGAAWRAVS 257 Query: 212 CFGENLGIIFQLADDLLD 229 +GE LG+ +Q+ DD+LD Sbjct: 258 EYGERLGLAYQVVDDILD 275 >gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus] Length = 369 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ A+RY+LL GGK++R L L + A+ A+E IH SLIHDDLP MD Sbjct: 104 KIHEAMRYSLLAGGKRVRPLLCIAACELVGGDVSVAMPAACAVEMIHTMSLIHDDLPCMD 163 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H + E A++AG+ LL++AFE ++ + + + L +G Sbjct: 164 NDDLRRGKPTNHKAFGEDIAVLAGDALLSFAFEHVAVSTVGASPDKIVRAVGELAKAVGK 223 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E +++ + I KT L+ A GAI+ + E ERLR F Sbjct: 224 EGLVAGQVVDITSEGLNDVGLDHLEYIHVHKTAVLLEAAVVLGAILGGGTDEEVERLRKF 283 Query: 214 GENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 284 AICIGLLFQVVDDILD 299 >gi|154498045|ref|ZP_02036423.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC 29799] gi|150273035|gb|EDN00192.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC 29799] Length = 312 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 90/233 (38%), Positives = 129/233 (55%), Gaps = 4/233 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 G+ + + R D L + LQ + D L A+ Y+LL GGK+IR L E Sbjct: 16 GVSGMMYDEVLRADCALVEDYLQHCFAGRDSRAD-LYDAMLYSLLAGGKRIRPVLALETC 74 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + TAL A+E +H YSLIHDDLP MD+ +RRG+PT H Y E TA++AG+ Sbjct: 75 RMCGGDVTTALPFACAVEMVHTYSLIHDDLPCMDDDDLRRGQPTNHKVYGEATAVLAGDA 134 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180 LLT AFE I+ T L L G +GM+GGQ LD+ E + +++ + Sbjct: 135 LLTAAFETIAEHGTSLSPERALAASACLGRAAGARGMVGGQALDMAGEGHSLSLSELEEL 194 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 Q++KTGAL+ A E G I+A + E+ +R + + LG+ FQ+ DD+LD E D Sbjct: 195 QRLKTGALISAATEIGCIVAGGGEKERAAVRRYAQLLGLAFQIRDDMLDVEGD 247 >gi|76818772|ref|YP_335377.1| geranyltranstransferase [Burkholderia pseudomallei 1710b] gi|126458601|ref|YP_001075667.1| geranyltranstransferase [Burkholderia pseudomallei 1106a] gi|167725531|ref|ZP_02408767.1| polyprenyl synthetase [Burkholderia pseudomallei DM98] gi|167828246|ref|ZP_02459717.1| polyprenyl synthetase [Burkholderia pseudomallei 9] gi|167849704|ref|ZP_02475212.1| polyprenyl synthetase [Burkholderia pseudomallei B7210] gi|242313506|ref|ZP_04812523.1| geranyltranstransferase [Burkholderia pseudomallei 1106b] gi|254264895|ref|ZP_04955760.1| geranyltranstransferase [Burkholderia pseudomallei 1710a] gi|76583245|gb|ABA52719.1| geranyltranstransferase [Burkholderia pseudomallei 1710b] gi|126232369|gb|ABN95782.1| geranyltranstransferase [Burkholderia pseudomallei 1106a] gi|242136745|gb|EES23148.1| geranyltranstransferase [Burkholderia pseudomallei 1106b] gi|254215897|gb|EET05282.1| geranyltranstransferase [Burkholderia pseudomallei 1710a] Length = 322 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 9/199 (4%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +A+RYA+ GG K++R L L + + +V A IE IH +SLI DDLP+MDN Sbjct: 58 LHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIHVFSLIQDDLPAMDN 117 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +R G+ T+H QYD TA++A +GL++ AF +S L ++R LM L +IG Sbjct: 118 DDLRHGRLTLHKQYDVATALLASDGLISQAFLALSEAPLPL--DVRVALMRELASSIGPS 175 Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE----KERLR 211 G+ GGQ +D+ +D T++ + +MKTGAL+ A G + E + Sbjct: 176 GLTGGQYIDLTSIGAHLDRTELEQMHRMKTGALIRAAVRMGVLCGTVPGAELGAAWRAVS 235 Query: 212 CFGENLGIIFQLADDLLDC 230 +GE LG+ +Q+ DD+LD Sbjct: 236 EYGERLGLAYQVVDDILDS 254 >gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205] Length = 312 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 125/227 (55%), Gaps = 14/227 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+ + ++++ LD + + + L A+RY+LL GGK++R L L Sbjct: 25 LESSRQQVEQALD-------GSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGG 77 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A+ A+E IH SLIHDDLP+MDN +RRG PT H Y E AI+AG+ LLT A Sbjct: 78 DAALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLTRA 137 Query: 128 FEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183 FE+++ SP + I+ LSL G G++GGQ++D++ E +D + I Sbjct: 138 FEMVALRSPGVPAEQLIKVVGELSLAS--GAPGLVGGQVVDLECEGKDVDLETLEYIHLH 195 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTGAL+ +GA++A AS+ L + +G+ FQ+ DD+LD Sbjct: 196 KTGALLRSCVLTGALIAGASEALLAALTTYARGIGLAFQIIDDILDV 242 >gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601] gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601] Length = 300 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 3/202 (1%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 + ++ + L ++RY+LL GGK+IR L SL A+ AIE IH SLIH Sbjct: 30 LGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIH 89 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP+MDN +RRG+PT H Y + AI+AG+ LLT AFE++S + ++ Sbjct: 90 DDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVVGE 149 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L+ G G++GGQ++D++ E +D + I KTGAL+ +GA++A A++ Sbjct: 150 LSLVAGAPGLVGGQVVDLECEGKEVDLKTLEYIHLHKTGALLKACVRTGAMIAGANEKLL 209 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 L + E +G+ FQ+ DD+LD Sbjct: 210 HALTTYAEGIGLAFQIIDDILD 231 >gi|261252274|ref|ZP_05944847.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] gi|260935665|gb|EEX91654.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] Length = 294 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/241 (36%), Positives = 128/241 (53%), Gaps = 20/241 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L S Q N+ +++ L LQ H N L+ A+RY LL GGK+ R FLV Sbjct: 1 MQEALTSFQQRNNDQLN-----LWLQALPH----QNQPLIEAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + +A+ECIH YSLIHDDLP+MD+ +RRG+ T HI++DE TAI+ Sbjct: 52 ITGQMLGCDKSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQTTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISS----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFID 173 G+ L T AF I++ P ++ R +++ L G GM GQ LD+ ++ + Sbjct: 112 GDALQTLAFTILADGDLHPNAEVN---RIKMIKVLADASGANGMCLGQALDLAAENRSVS 168 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEE 232 ++ I + KTGALM A GA+ A E +L + + +G+ FQ+ DD+LD Sbjct: 169 LEELEEIHRNKTGALMKSAIRLGALAAGEKGLEVMPQLDKYADAVGLAFQVQDDILDIVS 228 Query: 233 D 233 D Sbjct: 229 D 229 >gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp. lyrata] gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp. lyrata] Length = 403 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 8/197 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + A+RY + GGK++R L L +A+ ++E IH SLI DDLP MDN Sbjct: 139 IYKAMRYTIFAGGKRVRPILCLAACELVGGGERSAIPAACSVEMIHTMSLIKDDLPCMDN 198 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPT H + E AI++G LL AFE ++ K +R ++ L +IG + Sbjct: 199 DDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVR--VVKELAKSIGTK 256 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQ +D+ E +D + I KTGAL+ + GA++ S+ E E++R Sbjct: 257 GLVAGQAMDLSSEGLDPNDFRLEDLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRS 316 Query: 213 FGENLGIIFQLADDLLD 229 F +G++FQ+ DD+LD Sbjct: 317 FARCIGLLFQVVDDILD 333 >gi|187921415|ref|YP_001890447.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN] gi|187719853|gb|ACD21076.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN] Length = 293 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/224 (36%), Positives = 119/224 (53%), Gaps = 11/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R++T L+ L A+ T H A+RYA+LGG K++R L L Sbjct: 12 ERVETALEYYLPTEATEPATLHE-----AMRYAVLGGGKRVRPLLCHAAGELTGARAECL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L + AF +S Sbjct: 67 DAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF--VS 124 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190 L ++ L+ L G GM GGQ +D+ + TQ+ + +MKTGAL+ Sbjct: 125 LTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLR 184 Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 A GA+ + R L + +G+ FQ+ DD+LD D Sbjct: 185 AAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTD 228 >gi|134093559|ref|YP_001098634.1| geranyltranstransferase [Herminiimonas arsenicoxydans] gi|133737462|emb|CAL60505.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Herminiimonas arsenicoxydans] Length = 294 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 118/201 (58%), Gaps = 8/201 (3%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+ YA+L GGK++R LV +LF+ + R AA+E IH YSL+HDD+P MD Sbjct: 32 RLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAVEMIHAYSLVHDDMPCMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIG 155 + +RRGKPTVH++YDE A++ G+ L + AF++++ D +R M+ L G Sbjct: 92 DDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGGI---DPVRQLAMVRLLAKASG 148 Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRC 212 GM GGQ +D+ ++ + ++ + ++KTGAL+ + GA+ + S E + L Sbjct: 149 SLGMCGGQAIDLASVGLNLSLEELEQMHRLKTGALLRVSVLLGALAGKSLSAEETQALDS 208 Query: 213 FGENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD D Sbjct: 209 YAAAIGLAFQVVDDVLDATAD 229 >gi|218768956|ref|YP_002343468.1| geranyltranstransferase [Neisseria meningitidis Z2491] gi|121052964|emb|CAM09318.1| geranyltranstransferase [Neisseria meningitidis Z2491] gi|319411254|emb|CBY91661.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP synthase) [Neisseria meningitidis WUE 2594] Length = 298 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H++Y E TA++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHVKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + +T + + +KTGAL+ A GA+ + S++ L + L Sbjct: 158 GGQAIDLANVGKQMAQTDLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|308174223|ref|YP_003920928.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7] gi|307607087|emb|CBI43458.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7] gi|328554168|gb|AEB24660.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208] gi|328912560|gb|AEB64156.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3] Length = 296 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 124/199 (62%), Gaps = 4/199 (2%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + L ++ Y+L GGK++R +V + + + + VG A+E IH YSLIHDDLP M Sbjct: 31 ESLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLPCM 90 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNI 154 D+ +RRGKPT H + E A++AG+GLLT +F++I+S + ++ R +L+ L Sbjct: 91 DDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKLITSHVSEEVSAEKRLRLVDELISAA 150 Query: 155 GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G +GM+GGQ D++ E T ++ I + KT L+ F+ +GAI+A A ++E E+LR Sbjct: 151 GTEGMVGGQAADMEAEQKQVTLKELESIHERKTAKLLGFSVTAGAILADAPEDEIEKLRL 210 Query: 213 FGENLGIIFQLADDLLDCE 231 F ++GI FQ+ DD+LD E Sbjct: 211 FSSHIGIGFQIRDDILDIE 229 >gi|15615344|ref|NP_243647.1| geranyltranstransferase [Bacillus halodurans C-125] gi|10175402|dbj|BAB06500.1| geranyltranstransferase [Bacillus halodurans C-125] Length = 294 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 92/223 (41%), Positives = 135/223 (60%), Gaps = 7/223 (3%) Query: 16 IDTILDDLLLQTASHMQTQHN-DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 +D I D + + +H++ ++ D L +++ Y+L GGK+IR L+ F + + Sbjct: 9 LDEIKDIIEERMPAHIERLNSPDMLKNSMLYSLKAGGKRIRPALLLATMKSFQKDISQGI 68 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + AIE IH YSLIHDDLPSMD+ IRRGKPT H + E AI+AG+ LLTY+FEI++ Sbjct: 69 DLACAIEMIHTYSLIHDDLPSMDDDDIRRGKPTNHKVFGEAHAILAGDALLTYSFEIVA- 127 Query: 134 PKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190 K + D ++ L+ L G +GM+GGQ+ DI+ E T + I KTGAL+ Sbjct: 128 -KMKGVDPAKTLCLIEELARAAGPEGMVGGQVADIEGENQKLTVEGLEYIHHHKTGALLS 186 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 FA +GA +A AS+ + E +R F LG++FQ+ DD+LD E D Sbjct: 187 FAIVAGARLADASEQDIENIRRFSRELGLLFQIKDDILDVEGD 229 >gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91] gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91] Length = 297 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 120/200 (60%), Gaps = 8/200 (4%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+L GGK++R L L + + AA+E IH YSL+HDDLP MD Sbjct: 33 RLHEAMRYAVLNGGKRVRPLLSFAAGELSGADKTQVIAASAAVELIHAYSLVHDDLPCMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTHNI 154 N +RRGKPT HI+Y E TA++ G+ L + AF++++ ++ L ++ R+QL + L Sbjct: 93 NDILRRGKPTCHIRYGEPTALLVGDSLQSLAFQLLA--ESALTEDPRTQLEMIRHLAFAA 150 Query: 155 GLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGA-IMAHASQNEKERLR 211 G +GM GGQ +D+ + + ++ + KTGAL+ A GA + ++++ ++L Sbjct: 151 GSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKTGALIRAAVILGARCGSRLNEDQFKQLD 210 Query: 212 CFGENLGIIFQLADDLLDCE 231 F + +G+ FQ+ DD+LD E Sbjct: 211 HFAKCIGLAFQVVDDILDAE 230 >gi|315635861|ref|ZP_07891123.1| geranyltranstransferase [Arcobacter butzleri JV22] gi|315479840|gb|EFU70511.1| geranyltranstransferase [Arcobacter butzleri JV22] Length = 286 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/193 (39%), Positives = 115/193 (59%), Gaps = 13/193 (6%) Query: 49 GGKKIRSFL----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK+ R L V SL N A+ V +E +H YSLIHDDLP+MDN +RRG Sbjct: 37 GGKRFRPMLLLSVVKSNKSLLVSN---AMSVALGVEFLHTYSLIHDDLPAMDNSDLRRGF 93 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T+H +YDEVTAI+ G+ L T AF +I++ L ++I+ +L+ L HN G+ GM+ GQ Sbjct: 94 QTLHKKYDEVTAILVGDALNTEAFNLIAN--ASLHNDIKVELIKCLAHNGGINGMIIGQA 151 Query: 165 LD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 +D + + I Q+ + KT L+ + + GAI++ +E+L FG +LG++FQ Sbjct: 152 IDCHFEKQKIQLNQLEFLHIHKTARLIAASLKMGAIISEYDLQTQEKLYNFGIDLGLLFQ 211 Query: 223 LADDLLD--CEED 233 + DD++D C E+ Sbjct: 212 IQDDIIDETCTEE 224 >gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana] Length = 373 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 8/194 (4%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R L L A++ A+E IH SLI DDLP MDN + Sbjct: 111 AMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDL 170 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H + E AI++G LL AFE ++ K +R+ + L +IG +G++ Sbjct: 171 RRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRA--VKELAKSIGTKGLV 228 Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GQ D+ E +++ V + I KTG+L+ + GA++ ++ E E++R F Sbjct: 229 AGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFAR 288 Query: 216 NLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 289 CIGLLFQVVDDILD 302 >gi|15224199|ref|NP_179454.1| GGPS4 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4); farnesyltranstransferase [Arabidopsis thaliana] gi|75266042|sp|Q9SLG2|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 4; AltName: Full=Dimethylallyltranstransferase 4; AltName: Full=Farnesyl diphosphate synthase 4; AltName: Full=Farnesyltranstransferase 4; AltName: Full=Geranyltranstransferase 4; Flags: Precursor gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP synthetase/farnesyltranstransferase [Arabidopsis thaliana] gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana] Length = 372 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 8/194 (4%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R L L A++ A+E IH SLI DDLP MDN + Sbjct: 111 AMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDL 170 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H + E AI++G LL AFE ++ K +R+ + L +IG +G++ Sbjct: 171 RRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRA--VKELAKSIGTKGLV 228 Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GQ D+ E +++ V + I KTG+L+ + GA++ ++ E E++R F Sbjct: 229 AGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFAR 288 Query: 216 NLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 289 CIGLLFQVVDDILD 302 >gi|257459231|ref|ZP_05624350.1| geranyltranstransferase [Campylobacter gracilis RM3268] gi|257443616|gb|EEV18740.1| geranyltranstransferase [Campylobacter gracilis RM3268] Length = 357 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/196 (39%), Positives = 113/196 (57%), Gaps = 6/196 (3%) Query: 42 AIRYAL-LGGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGY 99 A+ Y L GGK R+ L+ S + AL + A+E IH YSLIHDDLP+MD+ Sbjct: 102 ALNYMLQAGGKHFRAQLLLGVVSTVDERRFEGALAIAMALEMIHTYSLIHDDLPAMDDAD 161 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+P++H +YDEVTAI+ G+ L T AF I +S L D I+ + + +L N G GM Sbjct: 162 LRRGRPSLHKKYDEVTAILVGDALNTDAFLIAAS--ANLSDEIKIKCIKTLARNAGSGGM 219 Query: 160 LGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 + GQ +D ++ + ++++ + KTGAL+ A E GAI+ L G L Sbjct: 220 VLGQAIDCRFENSPLKQSELEFLHLHKTGALIAAAFELGAIIGGLKDELAHELYKIGLKL 279 Query: 218 GIIFQLADDLLDCEED 233 G+IFQ+ DD++D D Sbjct: 280 GLIFQIEDDIIDATGD 295 >gi|153814704|ref|ZP_01967372.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756] gi|317500234|ref|ZP_07958464.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087536|ref|ZP_08336468.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847735|gb|EDK24653.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756] gi|316898360|gb|EFV20401.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|330401754|gb|EGG81332.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium 3_1_46FAA] Length = 296 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 126/226 (55%), Gaps = 10/226 (4%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 ++ +++I+ IL L QT H + A+ Y+L+ GGK++R L+ E LF Sbjct: 8 RKRTEKIEEILRKYLPD-----QTGHQQIIEEAMEYSLMAGGKRLRPMLMKETFDLFGGK 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I+ G+ LL YAF Sbjct: 63 GGVIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEDMGILTGDALLNYAF 122 Query: 129 EII-SSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 E S+ +T +++I + + L G+ GM+GGQ++D++ I + I ++K Sbjct: 123 ETACSAFETDPQNSILIGRALKILAGKAGIYGMIGGQVVDVRSAGCKISGELLAFIYRLK 182 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 TGAL+ + GA++A A + E ++ +G+ FQ+ DD+LD Sbjct: 183 TGALIEASVMIGAVLAGAKEEEIGKMEEIAGKIGLAFQIQDDILDV 228 >gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048] gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048] Length = 297 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/224 (37%), Positives = 133/224 (59%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + L A+ Y+L GGK++R L+ F Sbjct: 11 KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 68 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 69 VGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 128 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+ GQ+ D++ E I+E + I KTG Sbjct: 129 AYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELE--YIHNHKTGK 186 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 187 LLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVE 230 >gi|323693774|ref|ZP_08107969.1| geranyltranstransferase [Clostridium symbiosum WAL-14673] gi|323502160|gb|EGB18027.1| geranyltranstransferase [Clostridium symbiosum WAL-14673] Length = 294 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 112/201 (55%), Gaps = 6/201 (2%) Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 H + A+ Y++ GGK++R L+ E LF AAIE IH SLIHDDLP Sbjct: 27 HQKTIFEAMNYSVKAGGKRLRPLLMREVYRLFGGTGKEIEPFMAAIEMIHTSSLIHDDLP 86 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLT 151 MDN RRGK T + Y A++AG+ LL YA E ++ Q+ DN + + + L Sbjct: 87 CMDNDEYRRGKKTTWVVYGYDMAVLAGDALLIYAIE-TAARAFQMTDNSQRVGKCIGILA 145 Query: 152 HNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G+ GM+GGQ +D++ D+ I + ++ I ++KTGAL+ A GA+MA AS E E Sbjct: 146 QKTGIYGMIGGQTVDVELTDKLIPKDKLDFIYRLKTGALLEAAMVIGAVMAGASDEECET 205 Query: 210 LRCFGENLGIIFQLADDLLDC 230 + +G+ FQ+ DD+LD Sbjct: 206 VERMAAAIGLAFQIQDDILDV 226 >gi|330719242|ref|ZP_08313842.1| geranyltranstransferase [Leuconostoc fallax KCTC 3537] Length = 292 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 123/213 (57%), Gaps = 14/213 (6%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLI 88 Q ++ L + ++YA+L GGK++R L F +TA L+ +A+E IH YSL+ Sbjct: 25 QATLDEDLNAMMKYAVLNGGKRLRPLLTLAVVQSFG-RTITADILKAASAVEWIHSYSLV 83 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MDN +RRGKP+VH + E I+ G+ LLT AF I+S ++ R L+ Sbjct: 84 HDDLPAMDNDTMRRGKPSVHALFGEANGILVGDALLTGAFAILSDSRSNEDVQTRLDLIQ 143 Query: 149 SLTHNIGLQGMLGGQMLDIQ------DEFID---ETQVFMIQKMKTGALMCFACESGAIM 199 +L+ G GM+ GQ+ D++ D D + + + + KT AL+ +A E+GA++ Sbjct: 144 ALSALAGGYGMVYGQVNDMRNHNNTDDNNADIGVDWLLSAVHRPKTAALLTYASEAGAML 203 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A ++ + LR FG++ G+ +Q+ DD+ D + Sbjct: 204 AQ-QRSVQTHLRQFGDSFGVAYQIQDDIDDTAQ 235 >gi|157736691|ref|YP_001489374.1| geranyltranstransferase [Arcobacter butzleri RM4018] gi|157698545|gb|ABV66705.1| geranyltranstransferase [Arcobacter butzleri RM4018] Length = 286 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/193 (39%), Positives = 115/193 (59%), Gaps = 13/193 (6%) Query: 49 GGKKIRSFL----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK+ R L V SL N A+ V +E +H YSLIHDDLP+MDN +RRG Sbjct: 37 GGKRFRPMLLLSVVKSNKSLLVPN---AMSVALGVEFLHTYSLIHDDLPAMDNSDLRRGF 93 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T+H +YDEVTAI+ G+ L T AF +I++ L ++I+ +L+ L HN G+ GM+ GQ Sbjct: 94 QTLHKKYDEVTAILVGDALNTEAFNLIAN--ASLHNDIKVELIKCLAHNGGINGMIIGQA 151 Query: 165 LD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 +D + + I Q+ + KT L+ + + GAI++ +E+L FG +LG++FQ Sbjct: 152 IDCHFEKQKIQLNQLEFLHIHKTARLIAASLKMGAIISEYDLQTQEKLYNFGIDLGLLFQ 211 Query: 223 LADDLLD--CEED 233 + DD++D C E+ Sbjct: 212 IQDDIIDETCTEE 224 >gi|109897645|ref|YP_660900.1| polyprenyl synthetase [Pseudoalteromonas atlantica T6c] gi|109699926|gb|ABG39846.1| farnesyl-diphosphate synthase [Pseudoalteromonas atlantica T6c] Length = 296 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/217 (39%), Positives = 125/217 (57%), Gaps = 5/217 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D LLQ H L +A++YALL GGK++R FLV + A+E Sbjct: 15 DALLQAQIGKLGDHAPTLKNAMQYALLMGGKRMRPFLVYAVGEALGIEQSDLDAPALALE 74 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSPKTQLK 139 CIH YSL+HDDLP+MD+ +RRG PT HIQ+DE AI+AG+ L T AFEII + P + Sbjct: 75 CIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTLAFEIIVNYPLSDFA 134 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197 + R +L+ L G GM GGQ +D+ ++ I +TQ+ ++ KTGAL+ A + + Sbjct: 135 NAQRIELVRILGQASGYDGMCGGQGIDLASTNKLITQTQLELLHSKKTGALITAAVKMAS 194 Query: 198 IMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 ++ + +E K L+ + +G+ FQ+ DD+LD D Sbjct: 195 VLCPSVSDESKSLLQQYASTIGLAFQVQDDILDVVGD 231 >gi|261391792|emb|CAX49247.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP synthase) [Neisseria meningitidis 8013] gi|325139150|gb|EGC61696.1| geranyltranstransferase [Neisseria meningitidis ES14902] Length = 298 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/196 (41%), Positives = 118/196 (60%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT HIQYDE TA++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHIQYDEATALLVGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + + + + +KTGAL+ A GA+ + S++ L + L Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4] gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196] gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621] gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4] gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621] gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196] Length = 297 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/224 (37%), Positives = 133/224 (59%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + L A+ Y+L GGK++R L+ F Sbjct: 11 KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 68 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 69 VGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 128 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+ GQ+ D++ E I+E + I KTG Sbjct: 129 AYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELE--YIHNHKTGK 186 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 187 LLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVE 230 >gi|269138336|ref|YP_003295036.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202] gi|267983996|gb|ACY83825.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202] gi|304558368|gb|ADM41032.1| Geranyltranstransferase [Edwardsiella tarda FL6-60] Length = 301 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 118/203 (58%), Gaps = 5/203 (2%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+RY ALLGGK++R +LV LF + AA+ECIH YSL+HDDLP+MD+ Sbjct: 33 LVGAMRYGALLGGKRLRPYLVYATGGLFGCSPTALDAPAAAVECIHAYSLLHDDLPAMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E AI+AG+ L T AF I++ P + D R Q++ L H G+ Sbjct: 93 DDLRRGQPTCHIKFGEAHAILAGDALQTLAFSILADGPMPGVADRDRLQMLSELAHASGV 152 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCF 213 GM GGQ LD++ E + + I + KTGAL+ A GA+ A + L + Sbjct: 153 AGMCGGQALDLEAEGRHVALAALEQIHRHKTGALIRCAVRMGALAGGDAGRRALPALDRY 212 Query: 214 GENLGIIFQLADDLLDCEEDLPK 236 +G+ FQ+ DD+LD D K Sbjct: 213 AAAIGLAFQVQDDILDVVGDSSK 235 >gi|238918995|ref|YP_002932509.1| polyprenyl synthetase, [Edwardsiella ictaluri 93-146] gi|238868563|gb|ACR68274.1| polyprenyl synthetase, putative [Edwardsiella ictaluri 93-146] Length = 301 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/203 (41%), Positives = 120/203 (59%), Gaps = 5/203 (2%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+RY ALLGGK++R +LV SLF + AA+ECIH YSL+HDDLP+MD+ Sbjct: 33 LVGAMRYGALLGGKRLRPYLVYATGSLFGCSPTALDAPAAAVECIHAYSLLHDDLPAMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E AI+AG+ L T AF I++ + + D R Q++ L H G+ Sbjct: 93 DDLRRGQPTCHIKFGEAHAILAGDALQTLAFSILADGQMPGVTDRDRLQMLSELAHASGV 152 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213 GM GGQ LD++ E + + I + KTGAL+ A GA+ A +N L + Sbjct: 153 AGMCGGQALDLEAEGRHVALAALEQIHRHKTGALIRCAVRMGALAGGAPGRNALPVLDRY 212 Query: 214 GENLGIIFQLADDLLDCEEDLPK 236 +G+ FQ+ DD+LD D K Sbjct: 213 AAAIGLAFQVQDDILDVVGDSSK 235 >gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541] gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541] Length = 291 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 118/211 (55%), Gaps = 15/211 (7%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 ++ L A+ Y+L+ GGK++R L+ A + L A+E IH YSLIHDDLP+ Sbjct: 27 DNTLREAMEYSLMAGGKRLRPILLMAAADAVGSDGTKLLPAACALEMIHTYSLIHDDLPA 86 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGK T H Y + AI+AG+ LLT AF ++ K ++ + +L + I Sbjct: 87 MDNDDYRRGKLTNHKVYGDGIAILAGDALLTLAFTVLLRQK-----DVPAVSLLRVVDEI 141 Query: 155 ----GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G +GM+GGQ+LD+Q E I ++ + KTGAL A SGAI+ AS+ + Sbjct: 142 SRAAGAEGMVGGQVLDLQAENKTISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLT 201 Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLPK 236 L + ++ G+ FQ+ DD+LD ED+ K Sbjct: 202 ALTAYADHFGLAFQITDDILDVVGNAEDIGK 232 >gi|261378523|ref|ZP_05983096.1| geranyltranstransferase [Neisseria cinerea ATCC 14685] gi|269145073|gb|EEZ71491.1| geranyltranstransferase [Neisseria cinerea ATCC 14685] Length = 298 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/196 (39%), Positives = 118/196 (60%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H++Y E TA++ G+ L T AF++++ P + L + + ++ L G GM Sbjct: 99 RRGKPTCHVKYGEATALLVGDALQTQAFDVLARPSS-LPASRQLAMLSVLAKAGGSSGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + +T + + +KTGAL+ A GA+ + S+N L + L Sbjct: 158 GGQAIDLANVGKQMAQTDLEQMHSLKTGALIRAAVLLGAMSCPNLSENSLAVLDDYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|157146963|ref|YP_001454282.1| geranyltranstransferase [Citrobacter koseri ATCC BAA-895] gi|157084168|gb|ABV13846.1| hypothetical protein CKO_02740 [Citrobacter koseri ATCC BAA-895] Length = 299 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 121/204 (59%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGRMFGVSLSTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF IIS +P ++ D R ++ L + Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSIISDAPMPEVADRDRIAMISELAN 147 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLAAEGKQVPLEALERIHRHKTGALIRAAVRLGALSAGENGRNALPI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231 >gi|126445573|ref|YP_001062715.1| polyprenyl synthetase [Burkholderia pseudomallei 668] gi|126225064|gb|ABN88569.1| geranyltranstransferase [Burkholderia pseudomallei 668] Length = 322 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 9/199 (4%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +A+RYA+ GG K++R L L + + +V A IE IH +SLI DDLP+MDN Sbjct: 58 LHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIHVFSLIQDDLPAMDN 117 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +R G+ T+H QYD TA++A +GL++ AF +S L ++R LM L +IG Sbjct: 118 DDLRHGRLTLHKQYDVATALLASDGLISQAFLALSEAPLPL--DVRVALMRELASSIGPS 175 Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE----KERLR 211 G+ GGQ +D+ +D T++ + +MKTGAL+ A G + E + Sbjct: 176 GLTGGQYIDLTSIGAHLDRTELEQMHRMKTGALIRAAVRMGVLCGTVPGVELGAAWRAVS 235 Query: 212 CFGENLGIIFQLADDLLDC 230 +GE LG+ +Q+ DD+LD Sbjct: 236 EYGERLGLAYQVVDDILDS 254 >gi|261366961|ref|ZP_05979844.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176] gi|282571079|gb|EFB76614.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176] Length = 295 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 87/223 (39%), Positives = 124/223 (55%), Gaps = 14/223 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68 Q + +R++ + D+ L Q A Q A RY+LLGG K+IR+ L L Sbjct: 15 QMSEERLEKLCDEYLPQKAEIGQ---------AARYSLLGGGKRIRAVLALSACELAGKP 65 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AL A+E +HCYSLIHDD+P MDN RRG+P+ H QY E TA++A + L+T AF Sbjct: 66 AELALDYACALEMLHCYSLIHDDMPCMDNDDFRRGRPSCHKQYGEATALLAADALVTAAF 125 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186 E+I+ + +L R + L G +GML GQ LD + E E Q+ + KTG Sbjct: 126 EVIA--QAELSPESRCRAAAVLAKAGGARGMLYGQELDKKYEAQSATEQQLLELHAHKTG 183 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AL+ A E G I A A+ ++ L+ + LG++FQ+ DD+LD Sbjct: 184 ALILAAVELGCIAADAAPATRQALQRYAAELGLVFQIVDDILD 226 >gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa] gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa] Length = 314 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 3/199 (1%) Query: 34 QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 QH ++ A+RY+LLG GK++ L L + A+ + A+E +H SLIHDDL Sbjct: 46 QHPIKIHEAMRYSLLGNGKRMCPILCIASCELVGGDEELAMPLACALEMVHAMSLIHDDL 105 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT H + E AI+AG+ LL+ AFE I+S + + + + L Sbjct: 106 PCMDNDDLRRGKPTNHKVFGECIAILAGDALLSLAFEHIASKTKNVSPDCVVRAIAELGS 165 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 IG +G++ GQ++DI E + + I KT L+ + GAIM A ERL Sbjct: 166 AIGSRGVVAGQIVDIDSEGKEVSMKTLEYIHVHKTAKLLEASAVCGAIMGGADDASIERL 225 Query: 211 RCFGENLGIIFQLADDLLD 229 R + ++G+++Q+ DD+LD Sbjct: 226 RKYARSIGLLYQVVDDILD 244 >gi|167031589|ref|YP_001666820.1| polyprenyl synthetase [Pseudomonas putida GB-1] gi|166858077|gb|ABY96484.1| Polyprenyl synthetase [Pseudomonas putida GB-1] Length = 295 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/224 (36%), Positives = 128/224 (57%), Gaps = 10/224 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+DT L+ L + T+ +RL +A+RY+++ GGK++R L A Sbjct: 12 RVDTALEPLFIAP-----TKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQAN 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF + Sbjct: 67 GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLD 126 Query: 134 PK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 P + DNIR ++ +L G GM+GGQ +D+ +D+ + + + KTGAL+ Sbjct: 127 PHLSPQADNIRLAMVQALAKAAGPAGMVGGQAIDLGSVGLKLDQQALEFMHRHKTGALIE 186 Query: 191 FACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ A A Q + + L+ + + +G+ FQ+ DD+LD E D Sbjct: 187 ASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESD 230 >gi|167766573|ref|ZP_02438626.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1] gi|167711696|gb|EDS22275.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1] gi|291558609|emb|CBL37409.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium SSC/2] Length = 297 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/232 (35%), Positives = 128/232 (55%), Gaps = 11/232 (4%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 ++++ +I+ ILD+ L +T +L+A+ + GGK++R L+ E +F Sbjct: 6 EMKQKVAQIEIILDEYLPAQEGLQKT-----VLTAMNTTVKAGGKRLRPMLINETYQMFG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 AAIE IH YSLIHDDLP++DN RRG+ T HI Y E AI+AG+ LL Y Sbjct: 61 GKEDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLNY 120 Query: 127 AFEIISSP-KTQLKDNIRS--QLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 A+E+ + KD I + + + L G+ GM+GGQ+ D++ E + Q+ I Sbjct: 121 AYEVATKAFDLAEKDKIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSMEQILFIH 180 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 K KT AL+ GA++A AS+ + ++ GE +G+ FQ+ DD+LD D Sbjct: 181 KNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGD 232 >gi|296333415|ref|ZP_06875868.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675079|ref|YP_003866751.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149613|gb|EFG90509.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413323|gb|ADM38442.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str. W23] Length = 296 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 124/202 (61%), Gaps = 10/202 (4%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L ++ Y+L GGK++R +V + + + + VG A+E IH YSLIHDDLP M Sbjct: 31 DSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCM 90 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154 D+ +RRGKPT H + E TA++AG+GLLT +F++I+S + D + ++ L L + + Sbjct: 91 DDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITS---HVSDEVSAEKRLRLVNELI 147 Query: 155 ---GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G +GM+GGQ+ D++ E T ++ I + KT L+ F +GAI+A A + + E Sbjct: 148 SAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLSFCVIAGAILADAPEEDIET 207 Query: 210 LRCFGENLGIIFQLADDLLDCE 231 LR F ++GI FQ+ DD+LD E Sbjct: 208 LRTFSSHIGIGFQIRDDILDLE 229 >gi|104779861|ref|YP_606359.1| geranyltranstransferase [Pseudomonas entomophila L48] gi|95108848|emb|CAK13544.1| geranyltranstransferase [Pseudomonas entomophila L48] Length = 295 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 10/229 (4%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 Q R+D L+ L + + +RL +A+RY+++ GGK++R L Sbjct: 7 QSAQARVDAALEPLFQAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEALGAP 61 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185 + P+ + D IR Q++ +L G GM+GGQ +D+ + D+ + + + KT Sbjct: 122 SALLDPRLSPQADGIRLQMVQALAKAAGPAGMVGGQAIDLGSVGVKLDQQALEYMHRHKT 181 Query: 186 GALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ A A Q + + L+ + + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASARAEQAQLDALQVYAQAIGLAFQVQDDILDVESD 230 >gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311] gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311] Length = 312 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 125/225 (55%), Gaps = 10/225 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+ + R++ LD + M + + L A+RY+LL GGK++R L L Sbjct: 27 LKLSRDRVEIALD-------ASMGPERPESLRDAMRYSLLAGGKRLRPILCLAACELVGG 79 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A+ A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ +L+ A Sbjct: 80 SSELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRA 139 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 FE+++ + + +++ L G G++GGQ++D++ E +D + I KT Sbjct: 140 FEMVAVRSANVPADRLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLHKT 199 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 AL+ +GA++ A+ ++ + +R + +G+ FQ+ DD+LD Sbjct: 200 AALLRACVVTGALIGGANDDQLQAMRTYANGIGLAFQIIDDILDV 244 >gi|94986851|ref|YP_594784.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis PHE/MN1-00] gi|94731100|emb|CAJ54462.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis PHE/MN1-00] Length = 300 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 122/200 (61%), Gaps = 12/200 (6%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+LL GGK++R+ L A+LF+++ + L A IE IH YSLIHDDLP+MD+ Sbjct: 39 AMNYSLLAGGKRLRAVLCISSAALFDLSPTSILPFAAGIEMIHTYSLIHDDLPAMDDDDF 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GL 156 RRGKP+ H ++E AI+AG+ LLT AF +S+ L + S +L H I G Sbjct: 99 RRGKPSCHKAFNEALAILAGDALLTDAFTFMST----LNSIVPSNNILVAIHEIAQAAGS 154 Query: 157 QGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+ GQ +DI+ + + + +I + KTGAL +C +GA++A A+++ L+C+ Sbjct: 155 NGMVKGQSMDIEHTGVSDVSFNTLCIIHEYKTGALFRASCTTGAMLAGANESAIYALKCY 214 Query: 214 GENLGIIFQLADDLLDCEED 233 GE LG FQ+ DD+L+ D Sbjct: 215 GEALGAAFQITDDILNVTAD 234 >gi|284051541|ref|ZP_06381751.1| Polyprenyl synthetase [Arthrospira platensis str. Paraca] Length = 239 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 123/223 (55%), Gaps = 15/223 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L + + ++ LD + + + +++ ++RY+L+ GGK++R L Sbjct: 26 LSTYLSQKKELVEAALD-------AAITVTYPEKIYESMRYSLMAGGKRLRPTLCLATCE 78 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L A+ A+E IH SLIHDDLP+MDN RRGK T H Y + AI+AG+GL Sbjct: 79 LLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGL 138 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 L+YAFE +++ + Q++ L +G G++GGQ++DI E + E + I Sbjct: 139 LSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLTFI 198 Query: 181 QKMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIF 221 KTGAL+ C C GAI+A A++ + ERL + +N+G+ F Sbjct: 199 HTHKTGALLEACVVC--GAILAGANETDLERLSRYAKNIGLAF 239 >gi|294664721|ref|ZP_06730051.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605499|gb|EFF48820.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 291 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/203 (42%), Positives = 122/203 (60%), Gaps = 7/203 (3%) Query: 33 TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T RL +A+R+A+LGG K++R LV +LF A+E IH YSL+HDD Sbjct: 25 THAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDD 84 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ + +R M SL Sbjct: 85 LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLATAPASAE--LRVGWMQSLA 142 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKE 208 + G GM GGQ LDI D + +Q+M KTGAL+ A GA+ A+ +++ Sbjct: 143 NAAGAAGMCGGQALDI-DATGQLQSLQHLQRMHALKTGALIRAAVRMGALTGGAAAADQQ 201 Query: 209 RLRCFGENLGIIFQLADDLLDCE 231 RL F + LG+ FQ+ DD+LD E Sbjct: 202 RLDEFADALGLAFQVRDDILDVE 224 >gi|238787986|ref|ZP_04631782.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641] gi|238723934|gb|EEQ15578.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641] Length = 306 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 120/203 (59%), Gaps = 5/203 (2%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L+ A+RY A+LGGK++R +LV +F ++ AAIECIH YSL+HDDLP+ Sbjct: 36 NSDLVKAMRYGAVLGGKRLRPYLVYATGQMFGLSLANLDAPAAAIECIHAYSLMHDDLPA 95 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153 MD+ +RRG+PT H+++ E AI+AG+ L T AF I++ SP + D R ++ L + Sbjct: 96 MDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAESPMPDVADKDRLSMIAELAYA 155 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERL 210 G+ GM GGQ LD++ E I + I + KTGAL+ A GA+ A A E L Sbjct: 156 SGVAGMCGGQALDLEAEARQISLDDLEQIHRHKTGALIRAAVRLGALAAGAPGREALPLL 215 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD D Sbjct: 216 DRYANAIGLAFQVQDDILDVIGD 238 >gi|224543278|ref|ZP_03683817.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM 15897] gi|224523811|gb|EEF92916.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM 15897] Length = 284 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 14/204 (6%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+++ GGK++R L + ++V++ L + AIE IH YSLIHDDLP MDN + Sbjct: 29 AMTYSVMAGGKRLRPLLFIQTLRAYSVDYHKYLDIACAIEMIHTYSLIHDDLPGMDNDDL 88 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H Q+DE TAI+AG+ LL + +I + L D ++ +++ L + GL GM+ Sbjct: 89 RRGKPTCHKQFDEATAILAGDALLNESMNVI--IRMDLDDALKVEVLRYLYNASGLGGMI 146 Query: 161 GGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 GQ D+ E +DE Q I KTGAL+ + ++ A + + ++L G Sbjct: 147 YGQQQDMYFETHTATLDELQA--IHHDKTGALISVPMKIAGLI--AKKEDADKLENIGFK 202 Query: 217 LGIIFQLADDLLDC---EEDLPKK 237 LG+ FQ+ DD+LD E L KK Sbjct: 203 LGLAFQIQDDILDVTSTTETLGKK 226 >gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603] gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603] Length = 297 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 83/224 (37%), Positives = 133/224 (59%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L+ A+ +Q + L A+ Y+L GGK++R L+ F Sbjct: 11 KESKTFVEENLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 68 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131 + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF++I Sbjct: 69 VGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 128 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187 + + ++ + +L+L L G +GM+ GQ+ D++ E I+E + I KTG Sbjct: 129 AYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELE--YIHNHKTGK 186 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 187 LLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVE 230 >gi|169343610|ref|ZP_02864609.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495] gi|169298170|gb|EDS80260.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495] Length = 290 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 120/213 (56%), Gaps = 5/213 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D L+ + ++N L ++ Y++ +GGK+IR L+ ++ ++ L AIE Sbjct: 11 DQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIE 70 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A +++ + Sbjct: 71 MIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVLVDYSLEEGT 130 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGA 197 + + + G GM+GGQ++DI +E +E + + M KTG L+ + SGA Sbjct: 131 SALKATKI-IADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGA 189 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++A AS+ + ++L FG LG+ FQ+ DD+LD Sbjct: 190 VLAEASEGDIKKLEDFGYKLGLAFQIKDDILDV 222 >gi|325109156|ref|YP_004270224.1| polyprenyl synthetase [Planctomyces brasiliensis DSM 5305] gi|324969424|gb|ADY60202.1| Polyprenyl synthetase [Planctomyces brasiliensis DSM 5305] Length = 314 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 87/230 (37%), Positives = 125/230 (54%), Gaps = 26/230 (11%) Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L A+ DRL A RY+LL GGK++R LV A + L AIE +H Sbjct: 19 LDRAAQFTADCPDRLSEASRYSLLAGGKRLRPLLVLLSAQACSGKPEPGLPAALAIEMVH 78 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP+MD+ +RRG+PT H Q+DE TAI+AG+GLLT AFE +++ +R Sbjct: 79 TYSLIHDDLPAMDDDDLRRGRPTCHRQFDEATAILAGDGLLTRAFETLAAGIVDPATAVR 138 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD---------IQDEFIDET--------------QVFMI 180 +L L+ G++GM+GGQ D I+ + +ET Q+ I Sbjct: 139 --CVLELSRASGVEGMVGGQQADLDAEKRFEQIESKSSEETAENPAEPSDEAELQQLKAI 196 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + KTG L+ A GAI+ A + + + +G+ +G+ FQ+ DD+LDC Sbjct: 197 HRRKTGKLITCAVRMGAILGGADDAQLDAITRYGDAIGLAFQVMDDILDC 246 >gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] Length = 297 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 115/198 (58%), Gaps = 4/198 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RY++LGG K++R L L + A GAA+E IH YSL+HDDLP MD Sbjct: 33 RLHDAMRYSVLGGGKRVRPLLSFAAGELSGADKTHATIAGAAVELIHVYSLVHDDLPCMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H++YDE TA++ G+ L + AF++++ +++ +++ L G Sbjct: 93 NDTLRRGKPTCHVRYDEPTALLVGDSLQSLAFQLLTETNLTEDPHVQLEMVRHLAFAAGS 152 Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213 +GM GGQ +D+ + + ++ + KTGAL+ A GA + + + + L F Sbjct: 153 RGMAGGQAIDLDSVGKTLSLPELEFMHIHKTGALIRAAVILGARCGNRLDETQFKLLDHF 212 Query: 214 GENLGIIFQLADDLLDCE 231 + +G+ FQ+ DD+LD E Sbjct: 213 AKCMGLAFQVIDDILDTE 230 >gi|221310351|ref|ZP_03592198.1| hypothetical protein Bsubs1_13321 [Bacillus subtilis subsp. subtilis str. 168] gi|221314675|ref|ZP_03596480.1| hypothetical protein BsubsN3_13242 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319598|ref|ZP_03600892.1| hypothetical protein BsubsJ_13163 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323874|ref|ZP_03605168.1| hypothetical protein BsubsS_13292 [Bacillus subtilis subsp. subtilis str. SMY] gi|255767538|ref|NP_390308.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str. 168] gi|321311912|ref|YP_004204199.1| geranyltranstransferase [Bacillus subtilis BSn5] gi|251757288|sp|P54383|ISPA_BACSU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|225185166|emb|CAB14359.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str. 168] gi|291484870|dbj|BAI85945.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto BEST195] gi|320018186|gb|ADV93172.1| geranyltranstransferase [Bacillus subtilis BSn5] Length = 296 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 124/202 (61%), Gaps = 10/202 (4%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L ++ Y+L GGK++R +V + + + + VG A+E IH YSLIHDDLP M Sbjct: 31 DSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCM 90 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154 D+ +RRGKPT H + E TA++AG+GLLT +F++I+S + D + ++ L L + + Sbjct: 91 DDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITS---HVSDEVSAEKRLRLVNELI 147 Query: 155 ---GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G +GM+GGQ+ D++ E T ++ I + KT L+ F +GAI+A A + + E Sbjct: 148 SAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIET 207 Query: 210 LRCFGENLGIIFQLADDLLDCE 231 LR F ++GI FQ+ DD+LD E Sbjct: 208 LRTFSSHIGIGFQIRDDILDLE 229 >gi|145589885|ref|YP_001156482.1| polyprenyl synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048291|gb|ABP34918.1| farnesyl-diphosphate synthase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 304 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 128/233 (54%), Gaps = 18/233 (7%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV--- 67 +S+R ++ LD LL S H RL A+RYA GG K+IR LV L N Sbjct: 14 HSQRAESALDRLL---DSEKTIPH--RLHEAMRYAAQGGGKRIRPLLVYAAGQLGNSINE 68 Query: 68 -----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + AIECIH YSL+HDDLP MD+ +RRG+PTVH +DE TA++ G+ Sbjct: 69 QADQEKNAALDAAAVAIECIHAYSLVHDDLPCMDDDDLRRGRPTVHKAFDEATALLVGDA 128 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180 L T AFEI+++ K NIR ++ +L G +GM GGQ +D++ + +D + + Sbjct: 129 LQTRAFEILANAKCDA--NIRLAMISALAAASGSRGMAGGQAIDLESVGKKLDLDGLKQM 186 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ A G I A S + +L + E LG+ FQ+ DD+LD D Sbjct: 187 HAMKTGALLSCATALGGIAAGLSPAQMTQLLVYSEALGLAFQVVDDVLDATAD 239 >gi|309379784|emb|CBX21560.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 298 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/196 (39%), Positives = 117/196 (59%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAVLDGGKRLRPMLVLAASELGEAVHEAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H++Y E TA++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHVKYGEATALLVGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + + + +KTGAL+ A GA+ + S++ L + L Sbjct: 158 GGQAIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLGAMSCPNLSEDSLAVLDDYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|84685990|ref|ZP_01013886.1| geranylgeranyl pyrophosphate synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84666083|gb|EAQ12557.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium HTCC2654] Length = 286 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 85/199 (42%), Positives = 120/199 (60%), Gaps = 8/199 (4%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 L + YA+ GGK +R FLV E ASLF+V+ + AAIE +H SL+HDDLP MD+ Sbjct: 27 LAEPMAYAVEGGKGLRGFLVIEGASLFDVSPDRSSYAAAAIEAVHASSLVHDDLPCMDDD 86 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG+PTVH+++DE T ++ G L AFE++ P D IR++L +L H G G Sbjct: 87 DLRRGRPTVHVKWDEATGVLVGVALQFLAFELVGDPAVGSGD-IRAELARTLGHGAGGFG 145 Query: 159 MLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M+ GQ LD+ E ++ +Q KTGAL ++ +GAI+ A ++E LR +G Sbjct: 146 MVMGQSLDLAAEVAPNPLTLDEIIALQAGKTGALFEWSAFAGAILGEA---DREPLRQYG 202 Query: 215 ENLGIIFQLADDLLDCEED 233 LG FQ+ADD+LD E D Sbjct: 203 AALGQAFQIADDILDIEGD 221 >gi|317152625|ref|YP_004120673.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316942876|gb|ADU61927.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 297 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 80/197 (40%), Positives = 122/197 (61%), Gaps = 14/197 (7%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D LL A+ Y+LL GGK++R L A++ + + A++ECIH YSLIHDDLP+M Sbjct: 29 DSLLQAMEYSLLAGGKRLRPVLTLAWATMLGGDAERVMPFAASLECIHTYSLIHDDLPAM 88 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS----LT 151 D+ +RRG+P+ H +YDE TAI+AG+GLLT +F +++ + L + ++ +L L Sbjct: 89 DDDDLRRGRPSNHKRYDEATAILAGDGLLTESFVLMT--EASLIRGLPAERVLRAVSVLA 146 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNE 206 G GM+GGQ +D+ EF +V + + MKTGAL+ ACE GA++A AS+ + Sbjct: 147 VAAGSGGMVGGQAVDM--EFTGRAEVALDELRAMHAMKTGALITAACECGAVLAGASERD 204 Query: 207 KERLRCFGENLGIIFQL 223 E R +G +G+ FQ+ Sbjct: 205 VENAREYGRAVGVAFQI 221 >gi|313890735|ref|ZP_07824360.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026] gi|313120836|gb|EFR43950.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026] Length = 289 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 84/203 (41%), Positives = 119/203 (58%), Gaps = 6/203 (2%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L++AIRY A GGK+IR L+ E F+V + V AA+E IH SLIHDDLP Sbjct: 22 SEHLIAAIRYSAEAGGKRIRPLLLLELLEAFSVTLTDSHYDVAAALEMIHTGSLIHDDLP 81 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H ++DE TAI+AG+ L AF +I+ +T L NI+ LM L+H+ Sbjct: 82 AMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDAFALIA--ETNLSANIKVDLMHCLSHS 139 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + T + I + KTG L+ + + A +A + L Sbjct: 140 SGTFGMVGGQMLDMKAEGQELALTDLQEIHRHKTGCLLAYPFWAAAKIADVDEEILLDLY 199 Query: 212 CFGENLGIIFQLADDLLDCEEDL 234 G +G FQ+ DD+LD D Sbjct: 200 QAGLKVGHAFQVRDDILDVTADF 222 >gi|317498984|ref|ZP_07957266.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893733|gb|EFV15933.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 297 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 131/234 (55%), Gaps = 15/234 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 ++++ +I+ ILD+ L +T +L+A+ + GGK++R L+ E +F Sbjct: 6 EMKQKVAQIEIILDEYLPAQEGLQKT-----VLTAMNTTVKAGGKRLRPMLINETYQMFG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 AAIE IH YSLIHDDLP++DN RRG+ T HI Y E AI+AG+ LL Y Sbjct: 61 GKGDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLNY 120 Query: 127 AFEIIS-----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 A+E+ + + K Q+ + + + +L+ G+ GM+GGQ+ D++ E + Q+ Sbjct: 121 AYEVATKAFDLAEKDQIMNVVEAIKILA--SKPGIYGMIGGQVADVELEGTPLSMEQILF 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I K KT AL+ GA++A AS+ + ++ GE +G+ FQ+ DD+LD D Sbjct: 179 IHKNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGD 232 >gi|229825480|ref|ZP_04451549.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC 49176] gi|229790043|gb|EEP26157.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC 49176] Length = 307 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 35 HNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDD 91 D+LL A+ Y+LL GGK++R ++ E LF +R AA+E IH YSLIHDD Sbjct: 29 EEDKLLEEAMNYSLLAGGKRLRPLIMLEIFRLFGGKKEGLVRPFAAALEMIHTYSLIHDD 88 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP----KTQLKDNIRSQLM 147 LP+MDN +RRG+PT H Y E AI+AG+GLL A E S +T + + + Sbjct: 89 LPAMDNDDLRRGRPTNHKVYGEAVAILAGDGLLNLAAETSSKAFRYCETICEYKRVGEAL 148 Query: 148 LSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ--KMKTGALMCFACESGAIMAHAS 203 L G GM+GGQ+LD+ E ++T+ F + +KTG L+ A GA++A A Sbjct: 149 SRLFTYSGADGMIGGQILDMLSEEGKKEKTEDFFLTMYDLKTGGLIKAAFVIGALLAGAG 208 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++E + + G ++G++FQL DD+LD D K Sbjct: 209 EDEIDIIEKVGASVGLVFQLQDDILDISGDETK 241 >gi|161521357|ref|YP_001584784.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616] gi|189352476|ref|YP_001948103.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616] gi|221197059|ref|ZP_03570106.1| geranyltranstransferase [Burkholderia multivorans CGD2M] gi|221203731|ref|ZP_03576749.1| geranyltranstransferase [Burkholderia multivorans CGD2] gi|221212347|ref|ZP_03585324.1| geranyltranstransferase [Burkholderia multivorans CGD1] gi|160345407|gb|ABX18492.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616] gi|189336498|dbj|BAG45567.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616] gi|221167446|gb|EED99915.1| geranyltranstransferase [Burkholderia multivorans CGD1] gi|221175897|gb|EEE08326.1| geranyltranstransferase [Burkholderia multivorans CGD2] gi|221183613|gb|EEE16013.1| geranyltranstransferase [Burkholderia multivorans CGD2M] Length = 294 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 109/200 (54%), Gaps = 5/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+LGG K++R L L AA+E IH YSL+HDD+P MD Sbjct: 31 RLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH+QYDE TA++ G+ L + AF ++ L ++ L+ L G Sbjct: 91 DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTD-AAALSPVQQAALVRELALASGS 149 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213 GM GGQ +D+ I T Q+ + +MKTGAL+ A GA+ S + L + Sbjct: 150 LGMAGGQAIDLASVGIKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADTMAALDVY 209 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 210 AGAVGLAFQVVDDILDVTTD 229 >gi|222823159|ref|YP_002574732.1| geranyltranstransferase [Campylobacter lari RM2100] gi|222538380|gb|ACM63481.1| geranyltranstransferase [Campylobacter lari RM2100] Length = 282 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 118/201 (58%), Gaps = 14/201 (6%) Query: 41 SAIRYAL-LGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 A+++ L GGK R+ L+ T+ +LF AL A+E IH YSLIHDDLP+ Sbjct: 26 EALKWMLEAGGKHFRAQLLLGIVNTKNPALFE----KALNAALALEFIHTYSLIHDDLPA 81 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN +RRGK T+H +YDE TAI+ G+ L T AF ++S K LK+NIR +L+ +L N Sbjct: 82 MDNASLRRGKQTLHKKYDETTAILVGDALNTEAFLLLS--KLDLKENIRLKLIETLAFNA 139 Query: 155 GLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GL GM+ GQ +D +D ++ QV + KT L+ A + G + + E E++ Sbjct: 140 GLGGMIIGQAIDCYFEDIPLNLEQVEFLHIHKTARLIAAALKMGCEICELDEKECEQIYD 199 Query: 213 FGENLGIIFQLADDLLDCEED 233 G +G+IFQ+ DD++D D Sbjct: 200 IGLLIGLIFQIKDDIIDATLD 220 >gi|294625513|ref|ZP_06704141.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600182|gb|EFF44291.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 291 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 86/203 (42%), Positives = 122/203 (60%), Gaps = 7/203 (3%) Query: 33 TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T RL +A+R+A+LGG K++R LV +LF A+E IH YSL+HDD Sbjct: 25 THAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAMAVELIHAYSLVHDD 84 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ + +R M SL Sbjct: 85 LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLATAPASAE--LRVGWMQSLA 142 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKE 208 + G GM GGQ LDI D + +Q+M KTGAL+ A GA+ A+ +++ Sbjct: 143 NAAGAAGMCGGQALDI-DATGQLQSLQHLQRMHALKTGALIRAAVRMGALTGGAAAADQQ 201 Query: 209 RLRCFGENLGIIFQLADDLLDCE 231 RL F + LG+ FQ+ DD+LD E Sbjct: 202 RLDEFADALGLAFQVRDDILDVE 224 >gi|295397723|ref|ZP_06807795.1| geranyltranstransferase [Aerococcus viridans ATCC 11563] gi|294974052|gb|EFG49807.1| geranyltranstransferase [Aerococcus viridans ATCC 11563] Length = 297 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 114/212 (53%), Gaps = 3/212 (1%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 +LD+ +L++ +L ++ Y+L GGK+IR L+ NV+ L Sbjct: 13 VLDEAILKSVDQFGHAQPGQLKESMVYSLNTGGKRIRPMLLLATLKALNVDIQIGLNTAV 72 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH YSLIHDDLP+MDN RRGK T H +DE TAI+AG+ LLT +F +I++ Sbjct: 73 ALEYIHTYSLIHDDLPAMDNDDYRRGKLTNHKAFDEATAILAGDSLLTDSFALIANDSKI 132 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195 + L+ L+ G GM+ GQ+LD+ E I+ + I K KTG L+ +A + Sbjct: 133 QNMQTKVNLIAELSKAAGSNGMIAGQILDVDSEGKQINLRTLQDIHKHKTGELIRYAVFA 192 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 G +A AS L F GI +Q+ +DL Sbjct: 193 GGQIAQASSEVATLLDDFAWAYGIAYQIQNDL 224 >gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T] gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T] Length = 302 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 8/202 (3%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+LGG K++R L +L R+ A+E IH YSL+HDDLP MD Sbjct: 38 RLHEAMRYAVLGGGKRVRPLLAHAAGALAGAAAEDLDRIACAVELIHAYSLVHDDLPCMD 97 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTHNI 154 + +RRGKPTVH+++DE TA++AG+ L T AF++++ + L + +QL + L Sbjct: 98 DDVLRRGKPTVHVEFDEATALLAGDALQTLAFQVLA--ERPLGTDPANQLAMLNQLAIAS 155 Query: 155 GLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLR 211 G +GM GGQ +D+ + + ++ + KTGAL+ A GA +E RL Sbjct: 156 GSRGMAGGQAIDLASVGKRLGREELEFMHIHKTGALIRAAVLLGARAGGTLGADEHARLD 215 Query: 212 CFGENLGIIFQLADDLLDCEED 233 + + +G++FQ+ DDLLD E D Sbjct: 216 HYAKVVGLLFQVVDDLLDAEAD 237 >gi|254253601|ref|ZP_04946918.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158] gi|124898246|gb|EAY70089.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158] Length = 294 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 109/200 (54%), Gaps = 5/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+LGG K++R L L AA+E IH YSL+HDD+P MD Sbjct: 31 RLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH+QYDE TA++ G+ L + AF ++ L ++ L+ L G Sbjct: 91 DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA-LSPVQQAALVRELALASGS 149 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213 GM GGQ +D+ I T Q+ + +MKTGAL+ A GA+ S + L + Sbjct: 150 LGMAGGQAIDLASVGIKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADTMAALDVY 209 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 210 AGAVGLAFQVVDDILDVTTD 229 >gi|160897684|ref|YP_001563266.1| polyprenyl synthetase [Delftia acidovorans SPH-1] gi|160363268|gb|ABX34881.1| Polyprenyl synthetase [Delftia acidovorans SPH-1] Length = 316 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 120/204 (58%), Gaps = 17/204 (8%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV A + A+R G A+E IH YSL+HDD+P MDN + Sbjct: 52 AMRYAVLDGGKRLRPLLVWAAAEAVDGLQPAAVRAGCAVELIHAYSLVHDDMPCMDNDVL 111 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ---LKDNIRSQLMLSLTHNIGLQ 157 RRGKPTVH+Q+ E +A++AG+ L AFE++ Q + D ++++L L G Q Sbjct: 112 RRGKPTVHVQFGEASALLAGDALQALAFELLVPEPDQAGSMPDALQARLCRLLGRAAGAQ 171 Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGA------LMCFACESGAIMAHASQNEKER 209 GM GGQ +D+ + E Q+ + ++KTGA LM AC+ G + A A Q Sbjct: 172 GMAGGQAIDLASVGLQLSEAQLREMHRLKTGALLHASVLMGAACKEG-VDAQAWQA---- 226 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L +G+ LG+ FQ+ DD+LD D Sbjct: 227 LSDYGQALGVAFQVVDDILDVVAD 250 >gi|237809244|ref|YP_002893684.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187] gi|237501505|gb|ACQ94098.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187] Length = 296 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/232 (39%), Positives = 131/232 (56%), Gaps = 10/232 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 LQ S+ +DDLLLQ + + RL +A+R+ L LGGK++R FLV S+ ++ Sbjct: 3 LQTFSQHYRQRIDDLLLQKIETL-PDLSPRLKAAMRHGLVLGGKRVRPFLVYATGSMLDI 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AAIECIH YSLIHDDLP+MD+ +RRG PTVH +DE TA++AG+ L T A Sbjct: 62 DEALLDGPAAAIECIHAYSLIHDDLPAMDDDDLRRGHPTVHKAFDEATAVLAGDALQTLA 121 Query: 128 FEIISSPKTQLKDNIRSQ---LMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182 F I++ D +R+Q ++ +L G GM GGQ LD+ E + + +I + Sbjct: 122 FSILAD--HPFPDALRTQQVKMLSTLAQASGYAGMCGGQALDLAAEGQHVGLEALELIHR 179 Query: 183 MKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ A GA+ E L+ + +G+ FQ+ DD+LD D Sbjct: 180 HKTGALIECAVMLGALCQQDVAAETVSALKKYAAAIGLAFQVQDDILDVVSD 231 >gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza] Length = 364 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/245 (31%), Positives = 126/245 (51%), Gaps = 19/245 (7%) Query: 4 GLPSKLQENSKRIDTILDD-------LLLQTASHMQTQHNDRLL--------SAIRYALL 48 G+ + L R+ T DD +++ A+H+ +D + A+RY+LL Sbjct: 50 GVSAVLTGEEARVSTQRDDAPFNFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLL 109 Query: 49 -GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L + A+ A+E IH SLIHDDLP MDN +RRGKPT Sbjct: 110 AGGKRVRPMLCIAACEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 169 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H + + A++AG+ LL +AFE +++ T + + L IG +G++ GQ++D+ Sbjct: 170 HKVFGKDVAVLAGDALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDL 229 Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D + + I KT AL+ + GAI+ S ++ E+LR F +G++ Q+ Sbjct: 230 NCTGDANVGLDTLEFIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLLQVV 289 Query: 225 DDLLD 229 DD+LD Sbjct: 290 DDILD 294 >gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus coahuilensis m4-4] Length = 294 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/185 (41%), Positives = 114/185 (61%), Gaps = 3/185 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L+ F + ++ A+E +H YSLIHDDLPSMD+ +RRGKPT H Sbjct: 44 GGKRIRPVLLLATIEAFGKSPALGIKAAVALEMVHTYSLIHDDLPSMDDDDLRRGKPTNH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + E TAI+AG+ LLTY+FE+I+S K L + +L+ G +GM+GGQ+ D++ Sbjct: 104 KVFGEATAILAGDALLTYSFEVIASMKDILPQT-KIELVRLFAKAAGPEGMVGGQVADME 162 Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E T ++ I + KTG L+ +A +GAI+ AS+ E + + E++G+ FQ+ DD Sbjct: 163 GERKTLTLEELEYIHRNKTGKLLQYAVVAGAIIGGASKEEVRLYKEYAEHIGLAFQIKDD 222 Query: 227 LLDCE 231 +LD E Sbjct: 223 ILDIE 227 >gi|254481105|ref|ZP_05094351.1| polyprenyl synthetase superfamily protein [marine gamma proteobacterium HTCC2148] gi|214038900|gb|EEB79561.1| polyprenyl synthetase superfamily protein [marine gamma proteobacterium HTCC2148] Length = 303 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 90/228 (39%), Positives = 134/228 (58%), Gaps = 13/228 (5%) Query: 15 RIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71 R + L +L ASH + +H L +A Y+L GGK++R ++ A H Sbjct: 15 RCNQRLAELPFDIASHSEAAAEHISELQNAYLYSLASGGKRVRPAILYFAAQCVGGGHCE 74 Query: 72 AL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE- 129 +L + A+E +H YSLIHDDLP+MD+ +RRGKP++H Y+E TAI+ G+GL AFE Sbjct: 75 SLDQASCALELVHTYSLIHDDLPAMDDDDMRRGKPSLHKAYEESTAILVGDGLQARAFEL 134 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKT 185 +I +P + IR ++ L GL+GM+GGQ +DIQ D +DE Q + MKT Sbjct: 135 LIDAPNLTAEQKIR--MVKVLAEAAGLKGMVGGQYIDIQVTGADITLDELQA--MHSMKT 190 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + G I A+A++ + L +G ++G+ FQ+ADD+LD E D Sbjct: 191 GALIRASLALGGIAANATEEQLAALDEYGTHIGLAFQVADDILDVEGD 238 >gi|303232200|ref|ZP_07318903.1| putative geranyltranstransferase [Veillonella atypica ACS-049-V-Sch6] gi|302513306|gb|EFL55345.1| putative geranyltranstransferase [Veillonella atypica ACS-049-V-Sch6] Length = 292 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 77/195 (39%), Positives = 109/195 (55%), Gaps = 4/195 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL ++ Y+LL GGK+IR L V+ A+ECIH YSLIHDDLP+MD Sbjct: 30 RLYESMNYSLLQGGKRIRPILTKAVLDAMKVDASLYKEFLCALECIHTYSLIHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRG T H Y + AI+AG+GLLTYAF++ S T + + + + L G Sbjct: 90 NDDYRRGNLTNHKVYGDGMAILAGDGLLTYAFQLCSENTTASAEQ-KIKAIQCLATAAGP 148 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM+GGQ D+ E I ++ ++ KTGAL A E G I+++A Q + + Sbjct: 149 EGMVGGQAFDLLSEGKHIPLEELKVLHSGKTGALFNAAIELGLILSNADQAKYAAYMTYA 208 Query: 215 ENLGIIFQLADDLLD 229 LG++FQ+ DD+LD Sbjct: 209 NCLGLLFQITDDILD 223 >gi|303228797|ref|ZP_07315611.1| putative geranyltranstransferase [Veillonella atypica ACS-134-V-Col7a] gi|302516509|gb|EFL58437.1| putative geranyltranstransferase [Veillonella atypica ACS-134-V-Col7a] Length = 292 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 77/195 (39%), Positives = 109/195 (55%), Gaps = 4/195 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL ++ Y+LL GGK+IR L V+ A+ECIH YSLIHDDLP+MD Sbjct: 30 RLYESMNYSLLQGGKRIRPILTKAVLDAMKVDASLYKEFLCALECIHTYSLIHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRG T H Y + AI+AG+GLLTYAF++ S T + + + + L G Sbjct: 90 NDDYRRGNLTNHKVYGDGMAILAGDGLLTYAFQLCSENTTASAEQ-KIKAIQCLATAAGP 148 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM+GGQ D+ E I ++ ++ KTGAL A E G I+++A Q + + Sbjct: 149 EGMVGGQAFDLLSEGKHIPLEELKVLHSGKTGALFNAAIELGLILSNADQAKYAAYMTYA 208 Query: 215 ENLGIIFQLADDLLD 229 LG++FQ+ DD+LD Sbjct: 209 NCLGLLFQITDDILD 223 >gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota] Length = 366 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 116/202 (57%), Gaps = 5/202 (2%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q ++ ++RY+LL GGK++R L LF + A+ A+E IH SL+HDDL Sbjct: 96 QEPVKIHESMRYSLLAGGKRVRPLLSIAACELFGGHEAVAMPSACAVEMIHTMSLMHDDL 155 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY-AFEIISSPKTQLKDNIRSQLMLSLT 151 P MDN +RRGKPT H Y E A++AG+ +L AF ++++ + + ++++ L Sbjct: 156 PFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLALAAFHLVATETRGVSSDQVVRVIVELA 215 Query: 152 HNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 IG +G++ GQ++D+ D + + I + KT AL+ + GAI+ A+ E E Sbjct: 216 KAIGAEGLVAGQIVDVCSEGDPNLGLEDLEFIHRSKTAALLEGSVVMGAILGGANDEEVE 275 Query: 209 RLRCFGENLGIIFQLADDLLDC 230 ++R + +G++FQ+ DD+LD Sbjct: 276 KVRKYARCIGLLFQVVDDILDV 297 >gi|187929506|ref|YP_001899993.1| Polyprenyl synthetase [Ralstonia pickettii 12J] gi|309781717|ref|ZP_07676450.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA] gi|187726396|gb|ACD27561.1| Polyprenyl synthetase [Ralstonia pickettii 12J] gi|308919358|gb|EFP65022.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA] Length = 303 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/215 (37%), Positives = 123/215 (57%), Gaps = 4/215 (1%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 ++ L+ A +T RL +A+RYA LG GK++R L +L + + V A+E Sbjct: 16 EVALERALPAETVSPQRLHAAMRYATLGAGKRVRPLLAHAAGALGDASPEALDGVSCAVE 75 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+ L T AF I+ + + ++ Sbjct: 76 MIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGDALQTQAF-IVLAEQGAVRP 134 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198 R+ LM L G QGM GGQ +D+Q I + ++ + +MKTGAL+ + GA+ Sbjct: 135 ATRAVLMGELARASGSQGMAGGQAIDLQSVGIALSQDELEAMHRMKTGALLRASLRMGAL 194 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + E + + +G+ FQ+ DD+LD D Sbjct: 195 CAEVNAAALEHVDAYAGAVGLAFQVVDDILDVTAD 229 >gi|303257087|ref|ZP_07343101.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47] gi|302860578|gb|EFL83655.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47] Length = 300 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 119/208 (57%), Gaps = 20/208 (9%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDL 92 +L SA+RY+++GG K++R LV +++ + LTAL A+EC+H YSLIHDDL Sbjct: 33 KLHSAMRYSVIGGGKRVRPLLVYAVGQIYDADPENLDLTAL----AVECVHSYSLIHDDL 88 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +R GKPT H + E A++AG+ L AF + +T+L R +L+ L + Sbjct: 89 PCMDNDILRHGKPTTHTAFGEAVAMLAGDALQPEAFLFLV--RTKLPAEQRIKLVELLAY 146 Query: 153 NIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQN 205 +GM GGQ +D+ Q I+E + ++ MKTGAL+ + GA SQ+ Sbjct: 147 ASSTRGMCGGQAIDLSVVGNQKMTIEELR--LMHSMKTGALLKASVLLGAFAGKKTPSQH 204 Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233 + +L +G +G+ FQ+ DD+LD D Sbjct: 205 DLSQLEVYGNAIGLAFQIVDDILDVVGD 232 >gi|288553327|ref|YP_003425262.1| geranyltranstransferase [Bacillus pseudofirmus OF4] gi|288544487|gb|ADC48370.1| geranyltranstransferase [Bacillus pseudofirmus OF4] Length = 296 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 121/204 (59%), Gaps = 4/204 (1%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L A+ Y+L GGK++R L+ FN + AIE IH YSLIHDDLP+M Sbjct: 31 DTLKQAMTYSLKAGGKRVRPLLLLATLDGFNRPIEDGFDLACAIEMIHTYSLIHDDLPAM 90 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNI 154 D+ RRG+PT H Y E AI+AG+ LLTY+FE+I+S ++ ++ L+ L Sbjct: 91 DDDDTRRGQPTNHKVYGEAMAILAGDALLTYSFELITSMSAVREEPAKALTLVRELAKAS 150 Query: 155 GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+GGQ+ DI+ E T ++ I KTG L+ ++ +GA++A AS+ + E LR Sbjct: 151 GPCGMVGGQVADIEGENRSLTVQELADIHHHKTGDLLAYSIIAGAVLADASEEDLEHLRM 210 Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236 F LG++FQ+ DD+LD E D K Sbjct: 211 FAIELGLLFQIKDDILDVEGDSDK 234 >gi|166711441|ref|ZP_02242648.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 291 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 125/212 (58%), Gaps = 9/212 (4%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L+ A T+ RL +A+R+A+LGG K++R LV +LF A+E IH Sbjct: 17 LEAALPSATRAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIH 76 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ +R Sbjct: 77 AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAA--ASASAELR 134 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 M SL G GM GGQ LDI Q + + + Q + +KTGAL+ + GA+ Sbjct: 135 VGWMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQ--RMHALKTGALIRASVHMGALT 192 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A+ +++RL F + LG+ FQ+ DD+LD E Sbjct: 193 GGAATADQQRLDEFADALGLAFQVRDDILDVE 224 >gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275] gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275] Length = 295 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 16/215 (7%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + + ++ A+ Y+L GGK++R L E + + A+ AAIE IH YSLIHD Sbjct: 25 EVGYQKTIMEAMNYSLSSGGKRLRPVLTLEACRIVGGDTDNAIPFAAAIEMIHTYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI---RSQLM 147 DLP++DN +RRG+ T H + E AI+AG+ LL +A+E T LK++I + Sbjct: 85 DLPALDNDDLRRGRATNHKVFGEAMAILAGDALLNFAYE------TMLKESIGKENPERY 138 Query: 148 LSLTHNI----GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAH 201 L T+ I G+ GM+GGQ++D+Q E I + ++ I + KT A+M +GA + Sbjct: 139 LRATYEIAKGAGIYGMVGGQVVDVQSENMQIPKEKLDYIHENKTAAMMVGCMRAGAAIGG 198 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + + E + + +G+ FQ+ DD+LD D K Sbjct: 199 ADEKQMELITDYANKIGLAFQIVDDILDIVGDEAK 233 >gi|331000960|ref|ZP_08324597.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859] gi|329569919|gb|EGG51676.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859] Length = 300 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 119/208 (57%), Gaps = 20/208 (9%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDL 92 +L SA+RY+++GG K++R LV +++ + LTAL A+EC+H YSLIHDDL Sbjct: 33 KLHSAMRYSVIGGGKRVRPLLVYAVGQIYDADPENLDLTAL----AVECVHSYSLIHDDL 88 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +R GKPT H + E A++AG+ L AF + +T+L R +L+ L + Sbjct: 89 PCMDNDILRHGKPTTHAAFGEAVAMLAGDALQPEAFLFLV--RTKLPAEQRIKLVELLAY 146 Query: 153 NIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQN 205 +GM GGQ +D+ Q I+E + ++ MKTGAL+ + GA SQ+ Sbjct: 147 ASSTRGMCGGQAIDLSVVGNQKMTIEELR--LMHSMKTGALLKASVLLGAFAGKKTPSQH 204 Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233 + +L +G +G+ FQ+ DD+LD D Sbjct: 205 DLSQLEVYGNAIGLAFQIVDDILDVVGD 232 >gi|85708529|ref|ZP_01039595.1| geranyltranstransferase [Erythrobacter sp. NAP1] gi|85690063|gb|EAQ30066.1| geranyltranstransferase [Erythrobacter sp. NAP1] Length = 304 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 134/240 (55%), Gaps = 10/240 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60 N L L+ ID++ D L + + RL+ A+RYA +GG K++R L+ Sbjct: 8 NDVLGDALKRVQGEIDSVFDAFL-----PVPHDTSARLVEAMRYAAMGGGKRVRPLLLVS 62 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A L+ V+ AL AA+E IH YSLIHDDLP MD+ +R GKPTVH YD+ TA++AG Sbjct: 63 TAELYGVDRTAALCAAAAVEAIHVYSLIHDDLPCMDDDDLRHGKPTVHKVYDDATAVLAG 122 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDE---FIDETQ 176 + L AFEI++ +T +RS+L+ +L + G M + DE D Sbjct: 123 DALHALAFEILADSQTSADPFVRSELIATLGKASGMGGMAGGQMMDMVADEEGVEYDLRT 182 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +Q++KTGAL+ + E GAI+ + + LR + ++G+ FQ+ADDLLD E D K Sbjct: 183 ITRLQQLKTGALLAASVEMGAILGKVAPEGRAHLRAYSRDIGLAFQIADDLLDVEGDADK 242 >gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa] gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa] Length = 366 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 73/192 (38%), Positives = 109/192 (56%), Gaps = 4/192 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++RY+LL GGK++R L L + A+ A+E IH SLIHDDLP MDN + Sbjct: 105 SMRYSLLAGGKRVRPVLCLAACELVGGSESMAMPAACAVEMIHTMSLIHDDLPCMDNDDL 164 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGK T HI + E A++AG+ LL +AFE I+ + + + L IG +G++ Sbjct: 165 RRGKSTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSPLRIVRAVGELAKVIGAEGLV 224 Query: 161 GGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ++DI E + E Q+ I KT L+ A GAI+ + E E+LR + ++ Sbjct: 225 AGQVVDICSEGLSEVGLEQLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRRYARSI 284 Query: 218 GIIFQLADDLLD 229 G++FQ+ DD+LD Sbjct: 285 GLLFQVVDDILD 296 >gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379] gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379] Length = 297 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 87/235 (37%), Positives = 131/235 (55%), Gaps = 15/235 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L+E R+D LD L + +T+ L A+RY++ GGK++R L+ Sbjct: 3 LKAYLKEQCARVDAALDSYLPR-----ETELPHSLHKAMRYSVFAGGKRVRPILMLAACQ 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + A+ A+E IH YSLIHDDLP+MD+ RRG PT H + E AI+AG+ L Sbjct: 58 AVGGDTEVAIPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF---IDETQ 176 LT AF+++S+P + S+ L++ H I G GM+GGQ++D++ E ID Sbjct: 118 LTEAFKLLSNPACAA--GVPSEARLAVIHQIASCAGSHGMVGGQVVDMESEGKSDIDLPT 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 V I KTGAL+ A +GA++ A + + + +G G+ FQ+ADD+LD E Sbjct: 176 VQYIHTHKTGALIKAAVVAGALLGGADREKLAAITRYGSAAGLAFQIADDILDIE 230 >gi|289550707|ref|YP_003471611.1| Geranyltranstransferase (farnesyldiphosphate synthase) [Staphylococcus lugdunensis HKU09-01] gi|289180239|gb|ADC87484.1| Geranyltranstransferase (farnesyldiphosphate synthase) [Staphylococcus lugdunensis HKU09-01] Length = 260 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 82/194 (42%), Positives = 120/194 (61%), Gaps = 6/194 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + N ++ L AA+E IH YSLIHDDLP+MD+ RRGK T H Sbjct: 8 GGKRVRPLLLLLTLDMLNKDYQLGLATAAALEMIHTYSLIHDDLPAMDDDDYRRGKLTNH 67 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + E A++AG+ LLT AF++IS+ TQL ++I+ +L+ L G GM+GGQ LD+Q Sbjct: 68 KVFGEWKAVLAGDALLTKAFDVISND-TQLDNDIKVKLIQRLAFASGHLGMVGGQALDMQ 126 Query: 169 DEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E +D + + I + KTGAL+ FA + +A +++ E L F ++LG++FQ+ DD Sbjct: 127 SETQAVDISTLEQIHRAKTGALLTFAVMAATDIAQVNEHVAEHLNLFSQHLGLMFQIKDD 186 Query: 227 LLDC---EEDLPKK 237 LLD E L KK Sbjct: 187 LLDVYGEESKLGKK 200 >gi|15224197|ref|NP_179452.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75268021|sp|Q9ZU77|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7, chloroplastic; Short=GGPP synthase 7; Short=GGPS7; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7; AltName: Full=Dimethylallyltranstransferase 7; AltName: Full=Farnesyl diphosphate synthase 7; AltName: Full=Farnesyltranstransferase 7; AltName: Full=Geranyltranstransferase 7; Flags: Precursor gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP synthetase/farnesyltranstransferase [Arabidopsis thaliana] gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana] Length = 347 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 74/195 (37%), Positives = 109/195 (55%), Gaps = 7/195 (3%) Query: 42 AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 AIRY+LL GK++R L L AL A+E IH SLIHDDLP MDN + Sbjct: 85 AIRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDL 144 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H + E A++AG+ L+++AFE +++ T + + + L IG +G++ Sbjct: 145 RRGKPTNHKVFGEDVAVLAGDALISFAFEHLAT-STAVSPARVVRAIGELAKAIGSKGLV 203 Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GQ++D+ +D+ V + I KT L+ A GAI+ S E E+LR F Sbjct: 204 AGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFAR 263 Query: 216 NLGIIFQLADDLLDC 230 +G++FQ+ DD+LD Sbjct: 264 CIGLLFQVVDDILDV 278 >gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana] Length = 348 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 74/195 (37%), Positives = 109/195 (55%), Gaps = 7/195 (3%) Query: 42 AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 AIRY+LL GK++R L L AL A+E IH SLIHDDLP MDN + Sbjct: 85 AIRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDL 144 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H + E A++AG+ L+++AFE +++ T + + + L IG +G++ Sbjct: 145 RRGKPTNHKVFGEDVAVLAGDALISFAFEHLAT-STAVSPARVVRAIGELAKAIGSKGLV 203 Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GQ++D+ +D+ V + I KT L+ A GAI+ S E E+LR F Sbjct: 204 AGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFAR 263 Query: 216 NLGIIFQLADDLLDC 230 +G++FQ+ DD+LD Sbjct: 264 CIGLLFQVVDDILDV 278 >gi|322434675|ref|YP_004216887.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9] gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9] Length = 320 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 120/218 (55%), Gaps = 27/218 (12%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIEC-----IHCYSLIHDDLPS 94 A+R++ GGK++R L E A + + LT AL AA IH YSLIHDDLP+ Sbjct: 39 AMRHSTFAGGKRLRPILALEAARMVSGGTLTPALETAAAELGAALEMIHTYSLIHDDLPA 98 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLT 151 +DN +RRG+PT H+ + E TAI+AG+ L T AF+ I+ +P + +R ++ ++ Sbjct: 99 LDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQTIANLHAPAATVVSILR-EVSAAVA 157 Query: 152 HNIG---------LQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMA 200 +G GM+GGQ++DI+ E + T V I + KTGAL+ + +G ++ Sbjct: 158 TGVGSVGDLHTSLPPGMIGGQVMDIESEGVKPTAELVEAIHRAKTGALITVSVVAGGLLG 217 Query: 201 HASQNEK-----ERLRCFGENLGIIFQLADDLLDCEED 233 Q RLR FG+ G+ FQ+ DD+LD +D Sbjct: 218 LGDQPSTTHDTIARLRTFGQKAGLAFQIVDDVLDMTQD 255 >gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas] Length = 370 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 3/199 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 H ++ +A+RY+LL GGK++R L L + A+ A+E IH SLIHDDL Sbjct: 102 NHPLKIHAAMRYSLLAGGKRVRPILCIAACELVGGDEAAAMPSACAMEMIHTMSLIHDDL 161 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT H + E TAI+AG+ +L+ AFE I+ + +++ L Sbjct: 162 PCMDNDDLRRGKPTNHKMFGEETAILAGDAMLSLAFEHIARATKNVSPERVVRVITELGS 221 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +G +G++ GQ++D+ E ++ + I KT L+ A GAI A ER+ Sbjct: 222 AVGSEGLVAGQIVDVCSEGKEVNVKDLEYIHIHKTAKLLEAAVVCGAIAGGADDESIERV 281 Query: 211 RCFGENLGIIFQLADDLLD 229 R + +G++FQ+ DD+LD Sbjct: 282 RKYARCIGLLFQVIDDILD 300 >gi|78048472|ref|YP_364647.1| geranyltranstransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036902|emb|CAJ24595.1| Geranyltranstransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 291 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 122/204 (59%), Gaps = 9/204 (4%) Query: 33 TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T RL +A+R+A+LGG K++R LV +LF A+E IH YSL+HDD Sbjct: 25 THAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDD 84 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ + +R + SL Sbjct: 85 LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLATASASAE--LRVSWIQSLA 142 Query: 152 HNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 G GM GGQ LDI Q + + + Q + +KTGAL+ A GA+ A+ ++ Sbjct: 143 TAAGAAGMCGGQALDIDATGQLQSLQDLQ--RMHALKTGALIRAAVRMGALTGGAAAADQ 200 Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231 +RL F + LG+ FQ+ DD+LD E Sbjct: 201 QRLDEFADALGLAFQVRDDILDVE 224 >gi|329118147|ref|ZP_08246859.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200] gi|327465807|gb|EGF12080.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200] Length = 297 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 123/223 (55%), Gaps = 10/223 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTAL 73 + +T+L++L+ Q H A+RYA+LGG K++R LV + L + Sbjct: 16 QTETLLENLMPSENHAPQELHR-----AMRYAVLGGGKRLRPLLVLAASELGQADPDATA 70 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 AA+E IH YSL+HDD+P+MDN +RRGKPT HI Y E A++AG+ L T AF+II+ Sbjct: 71 HAMAAVELIHAYSLVHDDMPAMDNDSLRRGKPTCHIAYGEAAALLAGDALQTLAFDIITR 130 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCF 191 P L R Q+ +L G GM GGQ +D+ + + + ++++ + ++KTGAL+ Sbjct: 131 PAA-LPAERRLQMAATLARASGSLGMAGGQAIDLANVGKTLTQSELEHMHRLKTGALIRA 189 Query: 192 ACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A G + L + LG+ FQ+ DD+LDC D Sbjct: 190 AVRLGGLACPDLDDTALHSLDSYAAALGLAFQVIDDVLDCAAD 232 >gi|238765452|ref|ZP_04626373.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638] gi|238696346|gb|EEP89142.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638] Length = 299 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 85/206 (41%), Positives = 126/206 (61%), Gaps = 11/206 (5%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLP 93 N L+ A+RY A+LGGK++R +LV +F ++ LT+L AAIEC+H YSLIHDDLP Sbjct: 29 NSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGLS-LTSLDAPAAAIECVHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG+PT H+++ E AI+AG+ L T AF I++ +P ++ D R ++ L + Sbjct: 88 AMDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEAPMPEVADKDRLSMIAELAY 147 Query: 153 NIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK- 207 G+ GM GGQ LD++ E +DE + I + KTGAL+ A GA+ A E Sbjct: 148 ASGVAGMCGGQALDLEAEARQITLDELE--RIHRHKTGALIRAAVRLGALAAGTPGREVL 205 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 206 PLLDRYANAIGLAFQVQDDILDVIGD 231 >gi|302879474|ref|YP_003848038.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] Length = 297 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 115/202 (56%), Gaps = 9/202 (4%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+L GGK++R L L + V A++E IH YSL+HDD+P MD Sbjct: 34 RLHQAMRYAVLEGGKRVRPLLAFAAGELTGADIARVDIVAASVELIHAYSLVHDDMPCMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS--LTHNI 154 + +RRGKPT H+QYDE TA++ G+ L T AF++++ + +L D + Q+ + L Sbjct: 94 DDVLRRGKPTCHVQYDEATALLVGDSLQTLAFQLLT--EHRLSDGPQQQMAMIRLLASAS 151 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLR 211 G +GM GGQ +D+ D + ++ M KTGAL+ A GA S + L Sbjct: 152 GSRGMAGGQAIDL-DSVGKSLTLPELENMHIHKTGALIRAAVLLGAQCGAVSPVQLACLD 210 Query: 212 CFGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD E D Sbjct: 211 HYAKCVGLAFQVVDDVLDAEAD 232 >gi|298528183|ref|ZP_07015587.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298511835|gb|EFI35737.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 298 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 85/244 (34%), Positives = 132/244 (54%), Gaps = 23/244 (9%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN +L +K I+ L+ L + Q A+ Y+L+ GGK++R L Sbjct: 1 MNREFKQELASRAKEIEDYLESCLQFEGVPGELQQ------AMEYSLMAGGKRVRPVLCL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + L + +E IH YSL+HDDLP+MDN +RRGKPT H ++ E AI+A Sbjct: 55 AWGEMTGACTKDILPFASGLEMIHTYSLVHDDLPAMDNDDLRRGKPTSHKKFGEALAILA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDIQ---DEFI 172 G+GLLT AF ++ LK + ++ +L ++ G GM+GGQ +D++ E + Sbjct: 115 GDGLLTQAFAMM------LKTSFPAENVLAAAGTVAQAAGPAGMVGGQCIDMRATGRESM 168 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRC--FGENLGIIFQLADDLLD 229 + + + MKTGAL+ AC SGAI+A + +N ++ L +G N+G+ FQ+ DD+LD Sbjct: 169 ELVDLKGMHAMKTGALLRAACCSGAILAGSDPENGRDTLNAYNYGSNIGLAFQIVDDILD 228 Query: 230 CEED 233 D Sbjct: 229 VTGD 232 >gi|89069936|ref|ZP_01157269.1| farnesyl diphosphate synthase [Oceanicola granulosus HTCC2516] gi|89044490|gb|EAR50618.1| farnesyl diphosphate synthase [Oceanicola granulosus HTCC2516] Length = 289 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 90/202 (44%), Positives = 116/202 (57%), Gaps = 15/202 (7%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 L +A YAL GGK +R+FLV E A L + AL AAIEC+H YSL+HDDLP+MD+ Sbjct: 31 LEAASDYALEGGKGLRAFLVLEGARLCGLAPGAALGAAAAIECVHAYSLVHDDLPAMDDD 90 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIG 155 IRRG+PTVH +DE TAI+ G+ L AFE + +P +L L L G Sbjct: 91 DIRRGRPTVHKAWDEATAILVGDALQALAFEEVLACDAPPERL-----VALARGLAEAAG 145 Query: 156 LQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 +GM+ GQMLDI E + V IQ KTGAL+ ++ +GA +A A R Sbjct: 146 ARGMVAGQMLDIAAESAVAPMTLADVERIQSHKTGALIVWSATAGAHLAGADPAPFAR-- 203 Query: 212 CFGENLGIIFQLADDLLDCEED 233 +G LG+ FQ+ADDLLD D Sbjct: 204 -YGAALGLAFQIADDLLDATGD 224 >gi|295100831|emb|CBK98376.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii L2-6] Length = 296 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 78/191 (40%), Positives = 117/191 (61%), Gaps = 5/191 (2%) Query: 42 AIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A RY+LLGG K+IR+ LV + + N A + AA+E +HCYSLIHDDLP MDN + Sbjct: 38 AARYSLLGGGKRIRAVLVLAVCDMLHGNAEAAEQFAAAVEMLHCYSLIHDDLPCMDNDDM 97 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKP+ H + E TA++AG+ LLT AFE ++ T ++ +L G +GM+ Sbjct: 98 RRGKPSCHKAFGESTAMLAGDVLLTEAFEAVAGAPTPA--SVCVHAAQALGAGAGSRGMV 155 Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GQ LD++ E + E Q+ +I + KTGAL+ A + G A A + +++ L + +G Sbjct: 156 YGQELDLKYEALAAAEEQLRLIHRHKTGALINAAIQMGGAAAQADEVQRKALEAYAYGIG 215 Query: 219 IIFQLADDLLD 229 ++FQ+ DD+LD Sbjct: 216 LVFQIVDDVLD 226 >gi|259503553|ref|ZP_05746455.1| geranyltranstransferase [Lactobacillus antri DSM 16041] gi|259168466|gb|EEW52961.1| geranyltranstransferase [Lactobacillus antri DSM 16041] Length = 291 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 8/197 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSM 95 L +++RY+ + GGK++R L + L A +R A+E +H YSLIHDDLP+M Sbjct: 29 LAASMRYSTMAGGKRLRPTLTLATVEILG-GQLDADVMRAATALELLHTYSLIHDDLPAM 87 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRG PT H ++ A +AG+GLLT AF+ ++ L ++S+L L L G Sbjct: 88 DNDDLRRGAPTNHRKFGAGMATLAGDGLLTLAFQWVTD--NHLPAAVKSRLALELAKAAG 145 Query: 156 LQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+ GQ DI+ + + Q+ + + KTGAL+ +A +G I+ + + L F Sbjct: 146 PAGMVAGQARDIEGTGQQLSLDQLRYLHRQKTGALLRYAVLAGGIITAQPEKVQRLLAQF 205 Query: 214 GENLGIIFQLADDLLDC 230 G + G+ FQ+ DDL+D Sbjct: 206 GASYGLAFQIYDDLMDV 222 >gi|226951627|ref|ZP_03822091.1| geranyltranstransferase (farnesyldiphosphate synthase) [Acinetobacter sp. ATCC 27244] gi|226837608|gb|EEH69991.1| geranyltranstransferase (farnesyldiphosphate synthase) [Acinetobacter sp. ATCC 27244] Length = 303 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 122/204 (59%), Gaps = 14/204 (6%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L +A+ +A +LGGK++R L ASL N N R A+E IHCYSL HDDLP Sbjct: 34 EPLKAAVHHAVMLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN----IRSQLMLSL 150 MDN +RRG+PT H+ + E TA++AG+ L + AFEI+ S +L D I SQ++L Sbjct: 94 MDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILGS---RLFDEQGQGIDSQIVLKQ 150 Query: 151 THNIGLQG--MLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + M+ GQ+LD+Q E +D+T++ I + KTGAL+ A GA+ A + Sbjct: 151 MQILATASSKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVTVFAGTDP 210 Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229 +LR FG+ +G+ FQ+ DD+LD Sbjct: 211 AIPKLRQFGQTIGLAFQVQDDILD 234 >gi|226329091|ref|ZP_03804609.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198] gi|225202277|gb|EEG84631.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198] Length = 310 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 84/194 (43%), Positives = 115/194 (59%), Gaps = 5/194 (2%) Query: 42 AIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y ALLGGK++R FLV +F V L AAIECIH YSLIHDDLP+MD+ + Sbjct: 43 AMHYGALLGGKRLRPFLVYAVGEMFKVPALNLDAPAAAIECIHAYSLIHDDLPAMDDDDL 102 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRGKPT HI++ E AI+AG+ L AFEI++ +P + R ++ L GL GM Sbjct: 103 RRGKPTCHIEFGEANAILAGDALQALAFEILAKNPMPDVAITDRVAMIAELATASGLAGM 162 Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGEN 216 GGQ LD+ +D+ ID + I KTGAL+ A GA A + ++ L + + Sbjct: 163 CGGQALDLEAEDKSIDLASLEKIHLHKTGALIRAAVRLGAFSAGSKGHDVLPALDKYAHS 222 Query: 217 LGIIFQLADDLLDC 230 +G+ FQ+ DD+LD Sbjct: 223 IGLAFQVQDDILDV 236 >gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410699|gb|ABP67703.1| farnesyl-diphosphate synthase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 298 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 16/233 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L L+ ++ID LD LL + + D + A+RY++ GGK++R L Sbjct: 6 LTEYLKYAQEKIDKHLDSLLGKNSP-------DVIYEAMRYSVFAGGKRLRPILCLLSYE 58 Query: 64 LFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + L + AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E AI+AG+ Sbjct: 59 LLSGKEADEKVLDIACAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGD 118 Query: 122 GLLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQ 176 LL A E+ + + + K+N + L G +GM+GGQ++D+ + E +E Sbjct: 119 ALLNKAAEVCFNWILRNKAKENF-IKAAEYLFKASGTEGMIGGQVIDVVNSGKEITEENL 177 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ + KT L+ +C GA +A A + +G+NLG+ FQ+ DD+LD Sbjct: 178 LYEMHLKKTSKLIQASCVCGAYVAGAKEEVISDFEEYGKNLGLAFQIRDDILD 230 >gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL] gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL] Length = 299 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 86/246 (34%), Positives = 135/246 (54%), Gaps = 23/246 (9%) Query: 5 LPSKLQE----NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 + KL+E + K+++ LD +L + + + Q A+RY++ GGK++R L Sbjct: 2 ISRKLEEYINLSQKKVEKHLDGILKERSPEIIYQ-------AMRYSVFAGGKRLRPLLCL 54 Query: 60 ECASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 +F+ + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A Sbjct: 55 LSYQMFSEDKEIDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVMFGEAIA 114 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS---LTHNIGLQGMLGGQMLDIQD---E 170 I+AG+ LL A E+ L+ R L+ + L G++GM+GGQ++DI + + Sbjct: 115 ILAGDALLNLAAEVCMD--WILRYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQD 172 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +E +F + KT L+ +C GA++A A L +G+NLG+ FQ+ DD+LD Sbjct: 173 IKNEELLFEMHLKKTSRLIQASCVCGALVAGAEDRVVFDLEEYGKNLGLAFQIRDDVLDV 232 Query: 231 EEDLPK 236 D K Sbjct: 233 IGDSKK 238 >gi|226942935|ref|YP_002798008.1| geranyltranstransferase [Azotobacter vinelandii DJ] gi|226944165|ref|YP_002799238.1| geranyltranstransferase [Azotobacter vinelandii DJ] gi|226717862|gb|ACO77033.1| geranyltranstransferase [Azotobacter vinelandii DJ] gi|226719092|gb|ACO78263.1| geranyltranstransferase [Azotobacter vinelandii DJ] Length = 295 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 79/224 (35%), Positives = 126/224 (56%), Gaps = 10/224 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+D L+ LL + +Q RL A+RY+++ GGK++R LV A Sbjct: 12 RVDAALEALLQPPRAELQ-----RLYQAMRYSVVNGGKRVRPLLVYAACEALGGTPERAE 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL AFE+++ Sbjct: 67 GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEACAILAGDGLQALAFEVLTD 126 Query: 134 PKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190 P+ +D +R ++ +L G GM+GGQ +D++ +D + + + KTGAL+ Sbjct: 127 PRRNPRDAGLRLEMSRTLARAAGPAGMVGGQAIDLEAVGRRLDRDALETMHRHKTGALIE 186 Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ + A + + L + +G+ FQ+ DD+LD E D Sbjct: 187 ASVRLGALASGRADETDLAALAVYARAIGLAFQVQDDILDVESD 230 >gi|222871917|gb|EEF09048.1| predicted protein [Populus trichocarpa] Length = 254 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 120/204 (58%), Gaps = 17/204 (8%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV A + A+R G A+E IH YSL+HDD+P MDN + Sbjct: 17 AMRYAVLDGGKRLRPLLVWAAAEAVDGLQPAAVRAGCAVELIHAYSLVHDDMPCMDNDVL 76 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ---LKDNIRSQLMLSLTHNIGLQ 157 RRGKPTVH+Q+ E +A++AG+ L AFE++ Q + D ++++L L G Q Sbjct: 77 RRGKPTVHVQFGEASALLAGDALQALAFELLVPEPDQTGSMPDALQARLCRLLGRAAGAQ 136 Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGA------LMCFACESGAIMAHASQNEKER 209 GM GGQ +D+ + E Q+ + ++KTGA LM AC+ G + A A Q Sbjct: 137 GMAGGQAIDLASVGLQLSEAQLREMHRLKTGALLHASVLMGAACKEG-VDAQAWQA---- 191 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L +G+ LG+ FQ+ DD+LD D Sbjct: 192 LSDYGQALGVAFQVVDDILDVVAD 215 >gi|21243489|ref|NP_643071.1| farnesyl-diphosphate synthase [Xanthomonas axonopodis pv. citri str. 306] gi|21109048|gb|AAM37607.1| geranyltranstransferase [Xanthomonas axonopodis pv. citri str. 306] Length = 291 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 86/203 (42%), Positives = 119/203 (58%), Gaps = 7/203 (3%) Query: 33 TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T RL +A+R+A+LGG K++R LV +LF A+E IH YSL+HDD Sbjct: 25 THAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDD 84 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE+++ +R M SL Sbjct: 85 LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLA--AASASAELRVGWMQSLA 142 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKE 208 G GM GGQ LDI D + +Q+M KTGAL+ A GA+ A+ +++ Sbjct: 143 TAAGAAGMCGGQALDI-DATGQLQSLQHLQRMHALKTGALIRAAVRMGALTGGAALADQQ 201 Query: 209 RLRCFGENLGIIFQLADDLLDCE 231 RL F + LG+ FQ+ DD+LD E Sbjct: 202 RLDEFADALGLAFQVRDDILDVE 224 >gi|13431546|sp|Q42698|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; Flags: Precursor gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus] Length = 357 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 112/196 (57%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ ++RY+LL GGK++R L LF A+ A+E IH SL+HDDLP MD Sbjct: 92 KIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMPSACAVEMIHTMSLMHDDLPCMD 151 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H + E A++AG+ LL +AFE I++ + +++ L IG Sbjct: 152 NDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGVSSERIVRVVGELAKCIGS 211 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++D+ E I + + I KT AL+ + GAI+ A+ + +LR F Sbjct: 212 EGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVLGAIVGGANDEQISKLRKF 271 Query: 214 GENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 272 ARCIGLLFQVVDDILD 287 >gi|237730397|ref|ZP_04560878.1| geranyltranstransferase [Citrobacter sp. 30_2] gi|226905936|gb|EEH91854.1| geranyltranstransferase [Citrobacter sp. 30_2] Length = 299 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 84/208 (40%), Positives = 123/208 (59%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSL+HDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGQMFGVSLSTLDAPAAAVECIHAYSLMHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF IIS +P ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSIISDAPMPEVTDRDRIAMISELAQ 147 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD++ E ++ + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLEAEGHQVELDALERIHRHKTGALIRAAVRLGAL----SAGDKGRE 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 CLPILDKYAESIGLAFQVQDDILDVVGD 231 >gi|78063059|ref|YP_372967.1| farnesyl-diphosphate synthase [Burkholderia sp. 383] gi|77970944|gb|ABB12323.1| farnesyl-diphosphate synthase [Burkholderia sp. 383] Length = 294 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 5/206 (2%) Query: 32 QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 +T ++L A+RYA+LGG K++R L L AA+E IH YSL+HD Sbjct: 25 ETAVPEKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+P MD+ +RRGKPTVH+QYDE TA++ G+ L + AF ++ L ++ L+ L Sbjct: 85 DMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTD-AAALSPVQQAALVREL 143 Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK- 207 G GM GGQ +D+ + T Q+ + +MKTGAL+ A GA+ E Sbjct: 144 ALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSAETM 203 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 204 AALDVYAGAVGLAFQVVDDILDVTTD 229 >gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana] Length = 361 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 5/197 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ ++RY+LL GGK+IR + + N L A+ A+E IH SL+HDDLP MD Sbjct: 97 KIHESMRYSLLAGGKRIRPMMCIAACEIVGGNILNAMPAACAVEMIHTMSLVHDDLPCMD 156 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIG 155 N RRGKP H Y E A++ G+ LL+ +FE I ++ K KD I + + L ++G Sbjct: 157 NDDFRRGKPISHKVYGEEMAVLTGDALLSLSFEHIATATKGVSKDRI-VRAIGELARSVG 215 Query: 156 LQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E D + I KT L+ + GAIM S + E+LR F Sbjct: 216 SEGLVAGQVVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIGAIMGGGSDQQIEKLRKF 275 Query: 214 GENLGIIFQLADDLLDC 230 ++G++FQ+ DD+LD Sbjct: 276 ARSIGLLFQVVDDILDV 292 >gi|291277196|ref|YP_003516968.1| geranyltranstransferase [Helicobacter mustelae 12198] gi|290964390|emb|CBG40240.1| geranyltranstransferase [Helicobacter mustelae 12198] Length = 287 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 113/189 (59%), Gaps = 7/189 (3%) Query: 49 GGKKIRSFLV--TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R L+ C+ F++ A A+EC+H YSLIHDDLP MD+ +RRG PT Sbjct: 39 GGKRFRPALLFAVVCSQNFSLAK-NAFLPALALECLHTYSLIHDDLPCMDDASLRRGYPT 97 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H YDEVTA + G+GL T++F +++ K L + R +L+ L+H G+ GM+ GQ +D Sbjct: 98 LHRSYDEVTATLVGDGLNTFSFYLLT--KAHLDPSTRLRLIEMLSHYGGIGGMVIGQAMD 155 Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +++ ++ +++ I KT L+ + G ++A+ E L FG +LGI FQ+ Sbjct: 156 CYFENQHLEIEKLYAIHLNKTAKLIATSLCMGGVIANLPDGELRNLWDFGMDLGIFFQVR 215 Query: 225 DDLLDCEED 233 DD++D E+ Sbjct: 216 DDIIDRVEN 224 >gi|300313126|ref|YP_003777218.1| geranyltranstransferase [Herbaspirillum seropedicae SmR1] gi|300075911|gb|ADJ65310.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Herbaspirillum seropedicae SmR1] Length = 311 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 112/207 (54%), Gaps = 11/207 (5%) Query: 38 RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RY A+ GGK++R LV LF+ R AA+E IH YSL+HDD+P MD Sbjct: 40 RLHEAMRYTAMDGGKRVRPLLVYAAGELFDTPRALLERAAAAVEMIHVYSLVHDDMPCMD 99 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS------- 149 + +RRGKPTVHI+YDE TA++ G+ L AF+ +++P + + L Sbjct: 100 DDALRRGKPTVHIRYDEATALLVGDALQAQAFDTLAAPLESEAGSADAGLPARQLRMVKL 159 Query: 150 LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNE 206 L G GM GGQ +D+ + ++ + ++KTGAL+ A GA+ A + E Sbjct: 160 LAEAAGSVGMCGGQAIDLASVGMTLSLAELEQMHRLKTGALLRAAVLLGALGGKALTAAE 219 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 220 SAALDDYARAIGLAFQVVDDILDATAD 246 >gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335] gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335] Length = 307 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 83/232 (35%), Positives = 132/232 (56%), Gaps = 14/232 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L S L + S +++ +D + + + +++ A+RY+LL GGK++R L Sbjct: 14 LKSYLSDRSCQVEAAID-------AALPVVYPEQIYEAMRYSLLAGGKRLRPILCLATCE 66 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A+ A+E +H SLIHDDLP+MD+ RRGK T H Y E A++AG+ L Sbjct: 67 MLGASANIAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEGVAVLAGDAL 126 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 LTYAFE I++ Q D Q +L L +G +G++GGQ++D+ E +DE + Sbjct: 127 LTYAFEHIATQTPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQVVDLASEGTLVDEETL 186 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I KT AL+ + SGA++A AS+ +RLR + + +G+ FQ+ DD+LD Sbjct: 187 TFIHMHKTAALLEVSVTSGAMLAGASEAVVDRLRRYAQRIGLAFQIVDDVLD 238 >gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901] gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901] Length = 295 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 73/202 (36%), Positives = 115/202 (56%), Gaps = 10/202 (4%) Query: 42 AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+L GGK++R L+ + L +EC+H YSLIHDDLP+MDN Sbjct: 35 AMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDLPAMDNDDF 94 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GL 156 RRGKPT H + E AI+AG+ LLT AFE+ + L+ I ++ ++ + + G Sbjct: 95 RRGKPTNHKVFGEAIAILAGDALLTKAFELTAK---TLEQGIPAERVVRVIQELAVASGS 151 Query: 157 QGMLGGQMLDI-QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +G++ GQ++D+ E + +V + I KT L+ ++ +G I+A A++ E + L +G Sbjct: 152 EGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIKALDDYG 211 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 +LG+ FQ+ DDLLD D K Sbjct: 212 RHLGLAFQIVDDLLDVVGDFQK 233 >gi|1303919|dbj|BAA12575.1| YqiD [Bacillus subtilis] Length = 272 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 124/202 (61%), Gaps = 10/202 (4%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L ++ Y+L GGK++R +V + + + + VG A+E IH YSLIHDDLP M Sbjct: 31 DSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCM 90 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154 D+ +RRGKPT H + E TA++AG+GLLT +F++I+S + D + ++ L L + + Sbjct: 91 DDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITS---HVSDEVSAEKRLRLVNELI 147 Query: 155 ---GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G +GM+GGQ+ D++ + + ++ I + KT L+ F +GAI+A A + + E Sbjct: 148 SAAGTEGMVGGQVADMEAGNRQVTLEELESIHERKTSKLLGFCVIAGAILADAPEEDIET 207 Query: 210 LRCFGENLGIIFQLADDLLDCE 231 LR F ++GI FQ+ DD+LD E Sbjct: 208 LRTFSSHIGIGFQIRDDILDLE 229 >gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428] gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428] Length = 293 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 88/235 (37%), Positives = 129/235 (54%), Gaps = 9/235 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L S L K ID LD L + + +T H A+RY+L GGK++R L A Sbjct: 3 LKSYLTARGKLIDQALDRFLPRASVKPRTIHK-----AMRYSLFAGGKRLRPALTLAAAE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + AL A+ECIH YSLIHDDLP MD+ +RRG+PT H + E A++AG+ L Sbjct: 58 ACDGEVARALPAACAVECIHTYSLIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT AFEI++ K + + + L+ L G Q ++GGQ+ D++ E I ++ I Sbjct: 118 LTIAFEILAQAKETSRYKMPA-LIGELAGASGSQWLIGGQVADLEGEGKKISGAELKYIH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KT AL+ + G + A+AS + L FG++LG+ FQ+ DD+LD + K Sbjct: 177 RCKTAALLTASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQTTEK 231 >gi|289192774|ref|YP_003458715.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22] gi|288939224|gb|ADC69979.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22] Length = 317 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 79/198 (39%), Positives = 119/198 (60%), Gaps = 12/198 (6%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 ND+L +A ++ L GGK+IR +L L N L AA+E IH Y+LIHDD+ Sbjct: 22 NDKLYNASKHLLFAGGKRIRPYLTVVTYMLKKDNIREVLPAAAAVELIHNYTLIHDDI-- 79 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGKPTVH+ Y E AI+AG+ L AFE +S ++KDN ++ +L + Sbjct: 80 MDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAFEAVS----RIKDNKKAHEVLKILSKA 135 Query: 155 GLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 ++ + GQ +D++ E E + MI+K KTGAL+ + E GA+MA ++ E+E L+ Sbjct: 136 CVE-VCEGQAMDMEFENYYPTMEEYLEMIRK-KTGALLEASVEIGAVMADCNEEEREALK 193 Query: 212 CFGENLGIIFQLADDLLD 229 + + +G+ FQ+ DD+LD Sbjct: 194 EYAKRIGLTFQIQDDVLD 211 >gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A] gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A] Length = 299 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%) Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + + + ++L ++RY+LL GGK++R L L AL A+E IH SL Sbjct: 27 ASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELAGGELEKALPTAVALEMIHTMSL 86 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLPSMDN +RRG+PT H Y + AI+AG+ LLT AFE++S + +++ Sbjct: 87 IHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFEMVSIRTEGIPSERLLKII 146 Query: 148 LSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALM--CFACESGAIMAHAS 203 L+ G G++GGQ++D+ + + +D + I KTGAL+ C C GA++ A Sbjct: 147 GELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLHKTGALLKACVTC--GALIGGAD 204 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229 + + L + +G+ FQ+ DD+LD Sbjct: 205 EKLLDALSIYARGIGLAFQIIDDILD 230 >gi|116491232|ref|YP_810776.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1] gi|290890777|ref|ZP_06553844.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429] gi|116091957|gb|ABJ57111.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1] gi|290479549|gb|EFD88206.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429] Length = 275 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%) Query: 29 SHMQTQHNDRLLSAIRYALLG-GKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYS 86 S+ +D + I YAL GK++R L + A+ NV + + + A+E +H YS Sbjct: 19 SNYFADRDDDIFRMITYALNSTGKRLRPLLTLATFAAAGNVINDSTIEAATAVEFVHAYS 78 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+HDDLP MD+ RR + + ++ A++ G+GLLT AF+ IS+ L ++IR +L Sbjct: 79 LVHDDLPEMDDDTKRRNQSSTWKKFGVGNAVLVGDGLLTEAFKKISN--LSLPESIRLRL 136 Query: 147 MLSLTHNIGLQGMLGGQMLDI--QD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202 + +L G M+ GQ D+ QD E ID+ + I MKTGALM +A +G I+A Sbjct: 137 IYNLALAAGPDNMVRGQQYDLFSQDKVESIDDLE--FIHLMKTGALMTYAATAGGILAGL 194 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 S ++ L +G NLGI FQ+ DDL D ++D Sbjct: 195 SDDKLRALNIYGANLGIAFQIKDDLRDIKQD 225 >gi|238024940|ref|YP_002909172.1| polyprenyl synthetase [Burkholderia glumae BGR1] gi|237879605|gb|ACR31937.1| Polyprenyl synthetase [Burkholderia glumae BGR1] Length = 294 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 5/196 (2%) Query: 42 AIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA++GG K++R L L + + AA+E IH YSL+HDD+P MD+ + Sbjct: 35 AMRYAVMGGGKRVRPLLCHAAGELTGASEAASNAASAALEMIHVYSLVHDDMPCMDDDAL 94 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH+QYDE TA++ G+ L + AF ++ L ++ L+ L G GM Sbjct: 95 RRGKPTVHVQYDEPTALLVGDALQSQAFVALTD-AAALSPQQQAALVRELALASGSIGMA 153 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENL 217 GGQ +D+ + + Q+ + +MKTGAL+ + GA+ + R L + + Sbjct: 154 GGQAIDLASVGQMLTREQLETMHRMKTGALLRASVRMGALAGETPTADTMRALDAYAAAV 213 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LD D Sbjct: 214 GLAFQVVDDILDVTTD 229 >gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776] gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776] Length = 318 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 91/231 (39%), Positives = 132/231 (57%), Gaps = 15/231 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67 L+E K+I+ +D L T + L ++RY AL GGK++R LV + Sbjct: 28 LRELQKQIEMAMDTALSATPDVTRFVPPS-LFESMRYSALGGGKRLRPVLVLLASEACGA 86 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + L A+ A+E IHCYSLIHDDLP+MD+ +RRG+PT HI Y E TAI+AG+GLLT A Sbjct: 87 DPLQAMPAAVALEMIHCYSLIHDDLPAMDDDDLRRGRPTNHIVYGEATAILAGDGLLTRA 146 Query: 128 FEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 FE+++ T++ + +L L+ L G GM+GGQ D+ E T + ++++ Sbjct: 147 FEVLA---TEISNK---ELALACVADLASAAGWCGMVGGQAADLAAETTPVTTLAELEQI 200 Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 KTG L+ A G + AS + E L +G +G+ FQ+ADDLLD E Sbjct: 201 HHRKTGRLLACALTMGGRLGGASVQQLESLARYGFAIGLAFQIADDLLDVE 251 >gi|228992926|ref|ZP_04152850.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442] gi|228766783|gb|EEM15422.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442] Length = 297 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 134/222 (60%), Gaps = 6/222 (2%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L++ A+ +Q + L A+ Y+L GGK++R L+ F Sbjct: 11 KESKTFVEEQLVRYANQLQCP--NVLREAMTYSLEAGGKRLRPLLLFATLQAFEKERELG 68 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+GLLT+AF++++ Sbjct: 69 IGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVVT 128 Query: 133 SPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189 + Q + + +L L L G +GM+ GQ+ D++ E ++ +++ I K KTG L+ Sbjct: 129 AYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEYIHKHKTGRLL 188 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 +A +GA++A A+ ++++L F + +G+ FQ+ DD+LD E Sbjct: 189 EYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVE 230 >gi|107026831|ref|YP_624342.1| polyprenyl synthetase [Burkholderia cenocepacia AU 1054] gi|116691975|ref|YP_837508.1| polyprenyl synthetase [Burkholderia cenocepacia HI2424] gi|170736031|ref|YP_001777291.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3] gi|105896205|gb|ABF79369.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia AU 1054] gi|116649975|gb|ABK10615.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia HI2424] gi|169818219|gb|ACA92801.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3] Length = 294 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 5/206 (2%) Query: 32 QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 +T +L A+RYA+LGG K++R L L AA+E IH YSL+HD Sbjct: 25 ETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+P MD+ +RRGKPTVH+QYDE TA++ G+ L + AF ++ + L ++ L+ L Sbjct: 85 DMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAEA-LSPVQQAALVREL 143 Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK- 207 G GM GGQ +D+ + T Q+ + +MKTGAL+ A GA+ E Sbjct: 144 ALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSAETM 203 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 204 AALDVYAGAVGLAFQVVDDILDVTTD 229 >gi|118586761|ref|ZP_01544198.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus oeni ATCC BAA-1163] gi|118432849|gb|EAV39578.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus oeni ATCC BAA-1163] Length = 278 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%) Query: 29 SHMQTQHNDRLLSAIRYALLG-GKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYS 86 S+ +D + I YAL GK++R L + A+ NV + + + A+E +H YS Sbjct: 22 SNYFADRDDDIFRMITYALNSTGKRLRPLLTLATFAAAGNVINDSTIEAATAVEFVHAYS 81 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+HDDLP MD+ RR + + ++ A++ G+GLLT AF+ IS+ L ++IR +L Sbjct: 82 LVHDDLPEMDDDTKRRNQSSTWKKFGVGNAVLVGDGLLTEAFKKISN--LSLPESIRLRL 139 Query: 147 MLSLTHNIGLQGMLGGQMLDI--QD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202 + +L G M+ GQ D+ QD E ID+ + I MKTGALM +A +G I+A Sbjct: 140 IYNLALAAGPDNMVRGQQYDLFSQDKVESIDDLE--FIHLMKTGALMTYAATAGGILAGL 197 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 S ++ L +G NLGI FQ+ DDL D ++D Sbjct: 198 SDDKLRALNIYGANLGIAFQIKDDLRDIKQD 228 >gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803] gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803] Length = 312 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 116/205 (56%), Gaps = 3/205 (1%) Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + + + + L ++RY+LL GGK++R L L + A+ A+E IH SL Sbjct: 40 AALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGDASLAMPTAVALEMIHTMSL 99 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLP+MDN +RRG+PT H Y + AI+AG+ LL+ AFE+++ + +++ Sbjct: 100 IHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAFEMVAVRSEGVPPERLLKVV 159 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 L+ G G++GGQ++D++ E +D + I KT AL+ +GA++ A + Sbjct: 160 AELSLVSGAPGLVGGQVVDLESEGREVDLETLEYIHLHKTAALLRACVVTGALIGGADAS 219 Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230 + + +R + +G+ FQ+ DD+LD Sbjct: 220 QVDAMRTYANGIGLAFQIVDDILDV 244 >gi|227513485|ref|ZP_03943534.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577] gi|227524627|ref|ZP_03954676.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290] gi|227083358|gb|EEI18670.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577] gi|227088111|gb|EEI23423.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290] Length = 307 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 18/232 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 ++E + RI+ +L+ + Q +L ++ Y++ GGK++R L A+L Sbjct: 12 IKEWTPRINQVLESKIEQDTDQQ------KLFESMSYSVNAGGKRLRPLLT--IATLITF 63 Query: 68 NHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N + L+ A+E +H YSLIHDDLP+MDN +RRGKPT H Y A +AG+GL Sbjct: 64 NQAITDSILKATCALELLHSYSLIHDDLPAMDNDGLRRGKPTNHTIYGAGMATLAGDGLQ 123 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183 AF+ + L + R QL L+L G +GM GQ DI+ E ++ +QK+ Sbjct: 124 ALAFQWVVD--NDLTADTRCQLALALAKAAGPRGMASGQADDIEFEGT-RLKLHELQKLD 180 Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ +A +G IMA +++K+ L F N G FQ+ DD+LD D Sbjct: 181 RNKTGALISYAVNAGLIMAQVPKDQKKDLLAFANNFGAAFQIYDDILDIVGD 232 >gi|304389087|ref|ZP_07371131.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091] gi|304336960|gb|EFM03150.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091] Length = 298 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 78/196 (39%), Positives = 117/196 (59%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H++Y E TA++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHVKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + + + + +KTGAL+ A GA+ + S++ L + L Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|297588519|ref|ZP_06947162.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516] gi|297573892|gb|EFH92613.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516] Length = 271 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 6/202 (2%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 +D++ A+RY ++ K++R L +FN + +L AIE IH YSL+HDDL Sbjct: 23 DDKIGEAMRYTIVDDSAKRLRPLLFLLTYQMFNESITESLNYALAIELIHNYSLVHDDLE 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MDN RRGK TVH +Y E A++ G+ LL Y+FE++S +K+ ++ + Sbjct: 83 CMDNDEYRRGKLTVHKKYGEDIAVLVGDALLNYSFEVLSES---IKNEFDAKCANYIVKK 139 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G GM+ GQ+LDI E I E + I KT L+ + S I++ N +L + Sbjct: 140 SGCFGMIKGQLLDIDSE-ISEKNIIEIYDKKTCNLLKASTVSAGILSRVGDNTLLKLEDY 198 Query: 214 GENLGIIFQLADDLLDCEEDLP 235 NLG+ FQ+ DD++D E DL Sbjct: 199 AFNLGMAFQIIDDIMDYENDLK 220 >gi|154147947|ref|YP_001405809.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP synthase) [Campylobacter hominis ATCC BAA-381] gi|153803956|gb|ABS50963.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Campylobacter hominis ATCC BAA-381] Length = 284 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 75/193 (38%), Positives = 113/193 (58%), Gaps = 6/193 (3%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGY 99 A+ Y L GGK R+ L L+ A+ + AIE IH YSLIHDDLPS+DN Sbjct: 31 ALNYMLFAGGKHFRAQLCLGVVETMAPKKLSKAMPIALAIEMIHTYSLIHDDLPSVDNAD 90 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRG T+H +YDEV+AI+ G+ L T AF IS + L DNI+ + + L+ N G GM Sbjct: 91 FRRGIATIHKKYDEVSAILVGDALNTEAFYRIS--RADLNDNIKIKCVEILSKNAGSAGM 148 Query: 160 LGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 + GQ +D + + ++ +QV + ++KTGAL+ + GA ++ + + +++ G L Sbjct: 149 VLGQAIDCFFEKKQLEISQVEFLHRLKTGALIGASLALGATISEIPKEKTDKIYEIGLKL 208 Query: 218 GIIFQLADDLLDC 230 G+ FQ+ DDL+D Sbjct: 209 GLAFQINDDLIDA 221 >gi|34557991|ref|NP_907806.1| geranylgeranyl pyrophosphate synthase [Wolinella succinogenes DSM 1740] gi|34483709|emb|CAE10706.1| GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Wolinella succinogenes] Length = 286 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 117/203 (57%), Gaps = 8/203 (3%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 +N+ L +R GGK+ R L+ ++L + +A A+E +H YSLIH Sbjct: 24 FHPHYNEYLWEMVRN---GGKRFRPRLLLGVVSALAPLLVKSAYAPALALEILHTYSLIH 80 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP+MDN RRG PT+H++YDE +A++AG+ L T+AF +++ + L + + L+ Sbjct: 81 DDLPAMDNAATRRGHPTLHVKYDEASAVLAGDALNTHAFYLLA--QAPLGSDTKVALVRE 138 Query: 150 LTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G GM+ GQ LD + + ++ ++ I KTG L+ + + GAI+A S+ E+ Sbjct: 139 LASAGGAGGMVLGQALDCYFEHQKLEIEKLRFIHLHKTGRLIAASLKMGAIIAALSKEEQ 198 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 RL G LG++FQ+ DD++D Sbjct: 199 ARLEEIGLKLGLLFQVQDDIIDA 221 >gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter tengcongensis MB4] gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter tengcongensis MB4] Length = 294 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 12/209 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + A+RY++ GGK++R L L + AL V +IE IH YSLIHDDLP+MDN Sbjct: 30 IYEAMRYSVFAGGKRLRPVLCLSACELLGGDLKKALPVACSIELIHTYSLIHDDLPAMDN 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--- 154 +RRGKPT H + E AI+AG+GLL +E++ + L++ + +L + I Sbjct: 90 DDLRRGKPTNHKVFGEAIAILAGDGLLNLGYEVLI--RHALENPEDYEKILKAANEIATA 147 Query: 155 -GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G +G++GGQ+ DI Q+ + ++ I + KT AL+ + +GA MA AS+ E E LR Sbjct: 148 SGCKGIIGGQVEDILSQNTELTYEELKYIHEHKTAALIEASVCAGAHMAGASEKEVELLR 207 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 + +G+ FQ+ DD+LD E+ L KK Sbjct: 208 EYAGLIGLAFQIKDDILDVIGDEKTLGKK 236 >gi|225018823|ref|ZP_03708015.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum DSM 5476] gi|224948383|gb|EEG29592.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum DSM 5476] Length = 300 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 125/202 (61%), Gaps = 9/202 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 ++ A+RY++ GGK+IR L E + + AL A+E IH YSLIHDDLP MD+ Sbjct: 37 VVDAMRYSVTAGGKRIRPVLTLEVCRMLGGDPHKALPFACAVELIHSYSLIHDDLPCMDD 96 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQ---LKDNIRSQLMLSLTHN 153 +RRGKP+ HI + E TA++AG+ LLT AFE S +P+T ++ +R+ +LS Sbjct: 97 DAMRRGKPSCHIAFGESTALLAGDALLTLAFETASHAPQTHGTGCEETLRAISILSRL-- 154 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G+ GM+GGQ++D++ E I+ + + +KTGAL+ AC+ GA A A + + +++ Sbjct: 155 AGVHGMIGGQVIDLESEGRGIEYPVLHQMHLLKTGALIKAACQMGAAAAGAQEEDLDKIG 214 Query: 212 CFGENLGIIFQLADDLLDCEED 233 + + LG+ FQ+ DD+LD D Sbjct: 215 EYADALGLAFQICDDILDVVGD 236 >gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2] gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2] Length = 302 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 91/235 (38%), Positives = 132/235 (56%), Gaps = 20/235 (8%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+E ++D LD+ + + T L+ A+RY+L GGK++R L A Sbjct: 13 LEEKRVQVDAALDEYFPK-GDGLTTA----LIKAMRYSLFAGGKRLRPILCIAGAEAVGG 67 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L V A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+GLLT A Sbjct: 68 VGQRVLPVACAVELIHTYSLIHDDLPVMDDDDLRRGKPTNHKVFGEAIALLAGDGLLTEA 127 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDI-----QDEFIDETQVF 178 F +++SPK +NI +L + I G +GM+GGQ++DI EF ET F Sbjct: 128 FSLMTSPKAT--ENIEPPGLLEVIQIIAVAAGCEGMVGGQVVDILWEGKNAEF--ETVKF 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTGA++ + SGAI A A ++ + +G +G+ FQ++DD+LD E D Sbjct: 184 L-HTHKTGAMIRASVMSGAIAAGARESVVQHFSSYGHKIGLAFQISDDILDVEGD 237 >gi|227510476|ref|ZP_03940525.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190128|gb|EEI70195.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 307 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 18/232 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 ++E + RI+ +L+ + Q +L ++ Y++ GGK++R L A+L Sbjct: 12 IKEWTPRINQVLESKIEQDTDQQ------KLFESMSYSVNAGGKRLRPLLT--IATLITF 63 Query: 68 NHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N + L+ A+E +H YSLIHDDLP+MDN +RRGKPT H Y A +AG+GL Sbjct: 64 NQTITDSILKATCALELLHSYSLIHDDLPAMDNDGLRRGKPTNHTIYGAGMATLAGDGLQ 123 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183 AF+ + L + R QL L+L G +GM GQ DI+ E ++ +QK+ Sbjct: 124 ALAFQWVVD--NDLTADTRCQLALALAKAAGPRGMASGQADDIEFEGT-RLKLHELQKLD 180 Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ +A +G IMA +++K+ L F N G FQ+ DD+LD D Sbjct: 181 RNKTGALISYAVNAGLIMAQVPKDQKKDLLAFANNFGAAFQIYDDILDIVGD 232 >gi|303326969|ref|ZP_07357411.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3] gi|302862957|gb|EFL85889.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3] Length = 297 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 117/202 (57%), Gaps = 10/202 (4%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL ++ Y+L GGK++R L CA+L + AL AAIE IH YSLIHDDLP+MD Sbjct: 34 RLKESMLYSLQAGGKRLRPVLCLSCAALCGLEPQKALPFAAAIEMIHTYSLIHDDLPAMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKP+ H +DE TAI+AG+GLLT AF I+ +R+ L+L G Sbjct: 94 DDDLRRGKPSNHKAFDEATAILAGDGLLTDAFVIMCRAPVPPDRLLRAVAELALA--AGA 151 Query: 157 QGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GM+GGQ D+ + +QV + + MKTGAL+ +C G ++A + Sbjct: 152 SGMVGGQEWDMI--YTGRSQVSLEELRGMHAMKTGALLRASCVCGGLLAGVDDKALRAIS 209 Query: 212 CFGENLGIIFQLADDLLDCEED 233 FG +LG+ FQ+ADD+LD D Sbjct: 210 NFGSSLGVAFQIADDILDVVAD 231 >gi|206562765|ref|YP_002233528.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315] gi|198038805|emb|CAR54767.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315] Length = 294 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 110/206 (53%), Gaps = 5/206 (2%) Query: 32 QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 +T +L A+RYA+LGG K++R L L AA+E IH YSL+HD Sbjct: 25 ETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+P MD+ +RRGKPTVH+QYDE TA++ G+ L + AF ++ L ++ L+ L Sbjct: 85 DMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA-LSPVQQAALVREL 143 Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK- 207 G GM GGQ +D+ + T Q+ + +MKTGAL+ A GA+ E Sbjct: 144 ALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSTETM 203 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 204 AALDVYAGAVGLAFQVVDDILDVTTD 229 >gi|220931495|ref|YP_002508403.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168] gi|219992805|gb|ACL69408.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168] Length = 296 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 8/205 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A++Y+L GGK++R L A + + + +ALRVGA+IE +H YSLIHDDLPSMD+ Sbjct: 36 LVKAMKYSLFSGGKRLRPILTLMVAEMLDGDRDSALRVGASIELVHTYSLIHDDLPSMDD 95 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKP+ H + TAI+AG+ LLT+AF I+S K L + +++ ++ G Sbjct: 96 DDFRRGKPSNHKVFGTATAILAGDALLTFAFNILS--KLNLPPDKVLKIIEVISQGAGHN 153 Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ+LD+ +D+ I ++ I KTGAL + +GA A+ + E L + Sbjct: 154 GMVGGQVLDLEAEDKEISLEELKKIHSGKTGALFKSSILAGAYCANPDRTELTALERYAR 213 Query: 216 NLGIIFQLADDLLDC---EEDLPKK 237 LG+ FQ+ DD+LD EE L K+ Sbjct: 214 YLGLTFQIVDDILDVTGNEEVLGKR 238 >gi|294635305|ref|ZP_06713803.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685] gi|291091314|gb|EFE23875.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685] Length = 301 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 88/207 (42%), Positives = 124/207 (59%), Gaps = 13/207 (6%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMD 96 L+ A+RY ALLGGK++R +LV LF + L+AL AAIECIH YSL+HDDLP+MD Sbjct: 33 LVGAMRYGALLGGKRLRPYLVYATGRLFGCD-LSALDAPAAAIECIHAYSLLHDDLPAMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIG 155 + +RRG+PT HI++ E AI+AG+ L T AF +++ SP + D R ++ L H G Sbjct: 92 DDDLRRGQPTCHIKFGEAHAILAGDALQTLAFTLLTDSPMPGVADRDRLCMLSELAHASG 151 Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAI----MAHASQNEKER 209 + GM GGQ LD+ E +D + I + KTGAL+ A GA+ HA+ +R Sbjct: 152 VAGMCGGQALDLAAEGQRVDLAALEQIHRHKTGALIRCAVRLGALAGGNAGHAALTLLDR 211 Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236 + +G+ FQ+ DD+LD D K Sbjct: 212 ---YANAIGLAFQVQDDILDVVGDSSK 235 >gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens] Length = 332 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/230 (35%), Positives = 131/230 (56%), Gaps = 11/230 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L S L+ +K ++ LD + Q+ +++ A+RY+LL GGK++R L Sbjct: 41 LDSYLRAKAKAVNVALD-------KAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACE 93 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L N A+ A+E +H SLIHDDLP MD+ +RRGKPT H + E TA++AG+ L Sbjct: 94 LVGGNEDLAMPSACAMEMVHTMSLIHDDLPCMDDDDLRRGKPTNHKAFGEDTAVLAGDAL 153 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 L YAFE I+ T + + +++ L +G +G++ GQ++DI E + +++ + Sbjct: 154 LAYAFEHIARATTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDRTVGLEILEYV 213 Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KT L+ A SGAI+ AS++E RL + N+G++FQ+ DD+LD Sbjct: 214 HTHKTAVLLESAVVSGAILGGASEDEISRLSNYARNVGLLFQVVDDILDV 263 >gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455] gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455] Length = 297 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/200 (39%), Positives = 110/200 (55%), Gaps = 9/200 (4%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+ Y+LL GGK++R L A + + L + A E H SLIHDDLP MD Sbjct: 32 RLREAMNYSLLAGGKRLRPILCMAGAEIMGEKAESVLPMATAFEMAHTASLIHDDLPCMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS----LTH 152 N +RRGKPT H+ Y E A++AG+ L AFE ++ LK+ Q + Sbjct: 92 NDSLRRGKPTNHVVYGESLALLAGDALFLDAFE--TALAGLLKNGAEPQRCVRALALFAQ 149 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERL 210 +G +G+ GGQ+LD + + F++ MKT L+ + +GAI+A A RL Sbjct: 150 ALGPEGICGGQVLDTDRASQTDERDFVVDVASMKTMVLIRASLCAGAILAGADGEALRRL 209 Query: 211 RCFGENLGIIFQLADDLLDC 230 +GEN+G+ FQ+ADDLLDC Sbjct: 210 MKYGENVGLAFQIADDLLDC 229 >gi|329770468|ref|ZP_08261847.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325] gi|328836323|gb|EGF85989.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325] Length = 286 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 113/201 (56%), Gaps = 6/201 (2%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +I Y+L+ GKKIR +N+++ V AIE +H YSL+HDDLP MDN Sbjct: 32 LKESIIYSLVNDGKKIRPLSFLYLLKFYNIDYKEYFDVALAIELVHTYSLVHDDLPEMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 R GKPT H Y + A++ G+ +LT AFE++S K+ + D ++ L+ + G Sbjct: 92 DDYRWGKPTNHRVYGQDIAVLTGDSMLTLAFEVLS--KSNINDTLKVNLIQQFANYSGAM 149 Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+ GQ+ D++ + +D + ++ +KTG L+ + +A +++ + +R FG+ Sbjct: 150 GMIAGQVYDVKQKNYQVDANYLKLMHSLKTGRLIELPLDFACKIAR-KESDLDYIRSFGK 208 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 LGI +Q+ DD+LD + K Sbjct: 209 ELGIAYQIKDDILDYYGEFEK 229 >gi|295090870|emb|CBK76977.1| Geranylgeranyl pyrophosphate synthase [Clostridium cf. saccharolyticum K10] Length = 298 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 12/233 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L +L + ++ + I+ L Q H +T + A+ Y++ GGK++R L+ E Sbjct: 3 LKEQLLQYTRETEEIVYSYLPQETGHQKT-----IFEAMNYSVRAGGKRLRPLLMREVYR 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+ L Sbjct: 58 LFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQV 177 L YA E S D + + + + L+ G+ GM+GGQ +D++ ++ + ++ Sbjct: 118 LIYAVETASRAFLSGADAVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREKL 177 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I ++KTGAL+ + GA++A AS+ E + + N+G+ FQ+ DD+LD Sbjct: 178 DFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDV 230 >gi|261856267|ref|YP_003263550.1| polyprenyl synthetase [Halothiobacillus neapolitanus c2] gi|261836736|gb|ACX96503.1| Polyprenyl synthetase [Halothiobacillus neapolitanus c2] Length = 309 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 90/236 (38%), Positives = 125/236 (52%), Gaps = 20/236 (8%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL--- 64 Q T D L Q +M + RL AI +A++ GGK++R LV ASL Sbjct: 12 FQSWQSDFQTAFDIRLKQRLGNMLGESPQRLKDAIGHAVIDGGKRLRPILVVLGASLDST 71 Query: 65 ------FNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 N L L A AIE IH YSLIHDDLPSMDN +RRGKPTVH +DE TAI Sbjct: 72 PGSLPDPNDPRLEQLWNAAVAIELIHGYSLIHDDLPSMDNDDLRRGKPTVHRVFDEATAI 131 Query: 118 IAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE 174 +AG+ L + AF +++ +P+T +K + +LS G M+ GQ LD+ + Sbjct: 132 LAGDALQSLAFSLLADAPQTDVKTRLNWVSLLS----TGANRMVFGQQLDLNPPAQIPAL 187 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++ + ++KTGAL+ A GA +S ++ L F LG+ FQ+ DD+LD Sbjct: 188 AELTRMHELKTGALLYAALMMGA--NQSSAEDRAALEAFIRPLGLAFQIQDDILDA 241 >gi|295116024|emb|CBL36871.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium SM4/1] Length = 298 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 12/233 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L +L + ++ + I+ L Q H +T + A+ Y++ GGK++R L+ E Sbjct: 3 LKEQLLQYTRETEEIVYSYLPQETGHQKT-----IFEAMNYSVRAGGKRLRPLLMREVYR 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+ L Sbjct: 58 LFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQV 177 L YA E S D + + + + L+ G+ GM+GGQ +D++ ++ + ++ Sbjct: 118 LIYAVETASRAFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREKL 177 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I ++KTGAL+ + GA++A AS+ E + + N+G+ FQ+ DD+LD Sbjct: 178 DFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDV 230 >gi|170691118|ref|ZP_02882284.1| Polyprenyl synthetase [Burkholderia graminis C4D1M] gi|170144367|gb|EDT12529.1| Polyprenyl synthetase [Burkholderia graminis C4D1M] Length = 293 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 110/206 (53%), Gaps = 6/206 (2%) Query: 32 QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 +T +L A+RYA+LGG K++R L L AA+E IH YSL+HD Sbjct: 25 ETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+P MD+ +RRGKPTVH++YDE TA++ G+ L + AF +S L ++ L+ L Sbjct: 85 DMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF--VSLTSDVLAPAQQAALVREL 142 Query: 151 THNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEK 207 G GM GGQ +D+ + Q+ + +MKTGAL+ A GA+ A N Sbjct: 143 ALASGSIGMCGGQAIDLASVGHTLTRAQLETMHRMKTGALLRAAVRMGALAGEAPDANAM 202 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 203 RSLDAYSAAVGLAFQVVDDILDVTTD 228 >gi|332686260|ref|YP_004456034.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/ geranyltranstransferase [Melissococcus plutonius ATCC 35311] gi|332370269|dbj|BAK21225.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/ geranyltranstransferase (farnesyldiphosphate synthase)/ geranylgeranyl pyrophosphate synthetase [Melissococcus plutonius ATCC 35311] Length = 296 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 12/231 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLT 71 K ID I ++ SH Q L A+ Y++ GGK++R L+ + FN Sbjct: 10 KHIDRIEKEMANFIESHTSDQS---LKKAMLYSIQAGGKRLRPLLLLATINSFNCPIEQG 66 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF+++ Sbjct: 67 AYQTAAALEMLHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEALAILAGDGLLTGAFQLL 126 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189 + + I +L T G +GM+ GQ D+Q E ++ ++ + + KTGAL+ Sbjct: 127 ALSTIEAGKKILLTQLLGQT--AGTEGMVAGQSGDLQGEKKALNLQELSEVHRKKTGALI 184 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 F+ +G I+A+ S+ L+ G+ FQ+ DDLLD EE KK Sbjct: 185 EFSFMAGGILANQSEEIIYLLKQLANAFGLAFQIRDDLLDVIGSEEKQGKK 235 >gi|283797528|ref|ZP_06346681.1| geranyltranstransferase [Clostridium sp. M62/1] gi|291074897|gb|EFE12261.1| geranyltranstransferase [Clostridium sp. M62/1] Length = 298 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 12/233 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L +L + ++ + I+ L Q H +T + A+ Y++ GGK++R L+ E Sbjct: 3 LKEQLLQYTRETEEIVFSYLPQETGHQKT-----IFEAMNYSVRAGGKRLRPLLMREVYR 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+ L Sbjct: 58 LFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQV 177 L YA E S D + + + + L+ G+ GM+GGQ +D++ ++ + ++ Sbjct: 118 LIYAVETASRAFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREKL 177 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I ++KTGAL+ + GA++A AS+ E + + N+G+ FQ+ DD+LD Sbjct: 178 DFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDV 230 >gi|323529243|ref|YP_004231395.1| polyprenyl synthetase [Burkholderia sp. CCGE1001] gi|323386245|gb|ADX58335.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001] Length = 293 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 6/206 (2%) Query: 32 QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 +T +L A+RYA+LGG K++R L L AA+E IH YSL+HD Sbjct: 25 ETIEPAKLHEAVRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+P MD+ +RRGKPTVH++YDE TA++ G+ L + AF ++S L ++ L+ L Sbjct: 85 DMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVALTS--DVLAPAQQAALVREL 142 Query: 151 THNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEK 207 G GM GGQ +D+ + Q+ + +MKTGAL+ A GA+ A N Sbjct: 143 ALASGSIGMCGGQAIDLASVGHTLTREQLETMHRMKTGALLRAAVRMGALAGEAPDANAM 202 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 203 RSLDAYSAAVGLAFQVVDDILDVTTD 228 >gi|302185471|ref|ZP_07262144.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae 642] Length = 295 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/229 (36%), Positives = 130/229 (56%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ LD L A + DRL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALDGLFQAPAPEL-----DRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + HA Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230 >gi|268680553|ref|YP_003304984.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268618584|gb|ACZ12949.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 286 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 11/189 (5%) Query: 48 LGGKKIRSFL----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 +GGK+ R L V A L N AL V +E +H YSLIHDDLP MDN +RRG Sbjct: 38 VGGKRFRPLLLLSVVEASAPLLFEN---ALHVSLGLEMMHTYSLIHDDLPCMDNAALRRG 94 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 PT+H+ YDE TA++ G+ L T+AF I++ L I+ +L+ L + G+ GM+ GQ Sbjct: 95 HPTLHVTYDETTAVLIGDALNTHAFYRIAN--APLSAEIKVRLVSILAGDAGIYGMVLGQ 152 Query: 164 MLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 LD +D+ +D Q+ + KT L+ + GA++ + +E + FG LG++F Sbjct: 153 ALDCFFEDKRLDVEQLSFLHVHKTAKLIAASLLMGAVICELDKATQETVYAFGLRLGLLF 212 Query: 222 QLADDLLDC 230 Q+ DD++D Sbjct: 213 QIQDDIIDA 221 >gi|172056944|ref|YP_001813404.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15] gi|171989465|gb|ACB60387.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15] Length = 289 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/204 (42%), Positives = 125/204 (61%), Gaps = 6/204 (2%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 DRL A+ Y+L GGK++R L+ + V+ T AA+E IH YSLIHDDLP+M Sbjct: 26 DRLREAMLYSLDAGGKRVRPALIYAVLDAYGVDRKTGDATAAALEMIHTYSLIHDDLPAM 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRG+PT HI++DE TAI+AG+ LLT AF + +T ++ +L+ L G Sbjct: 86 DDDDMRRGRPTNHIEFDEATAILAGDALLTNAFTCLL--ETMAAAEVKVKLLERLAAAAG 143 Query: 156 LQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM+GGQ+ D+ E D ++ I + KTGAL+ FA E+G I+A + + E+L+ Sbjct: 144 AAGMVGGQLDDMLGERGGISDAEELESIHRRKTGALLIFAVEAGGILAGVADEDLEQLKR 203 Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236 +G +LGI FQ+ DD+LD D K Sbjct: 204 YGRHLGIAFQIQDDILDVTGDADK 227 >gi|229086753|ref|ZP_04218919.1| Geranyltranstransferase [Bacillus cereus Rock3-44] gi|228696574|gb|EEL49393.1| Geranyltranstransferase [Bacillus cereus Rock3-44] Length = 297 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/222 (36%), Positives = 131/222 (59%), Gaps = 6/222 (2%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K +++ L++ A+ +Q + L A+ Y+L GGK++R L+ F Sbjct: 11 KESKAFVEEQLVRYANQLQC--PNVLREAMIYSLEAGGKRLRPLLLFATLQAFEKERELG 68 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+GLLTYAF+ ++ Sbjct: 69 IGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQAVT 128 Query: 133 SPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189 + Q ++ + +L L L G +GM+ GQ+ D++ E ++ + I K KTG L+ Sbjct: 129 AYDHQDVQAETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLEREGLEYIHKHKTGRLL 188 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 +A +GAI+A A+ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 189 EYAVLAGAILAGATPEQEEKLLAFAKYIGLAFQIRDDILDVE 230 >gi|183219510|ref|YP_001837506.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909652|ref|YP_001961207.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774328|gb|ABZ92629.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777932|gb|ABZ96230.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 307 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 120/212 (56%), Gaps = 17/212 (8%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVT----ECASLFNV----NHLTALRVGAAIECIHCYSLI 88 R+ A Y+L GGK++R V E LF+ H + A+ECIH YSLI Sbjct: 33 RITEACLYSLHAGGKRVRPIFVINSFFEPNDLFSSEPFDTHQSVFLAALAVECIHTYSLI 92 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MDN RRGKPT H Q+DE TAI+AG+ L + +F+++S + +R + + Sbjct: 93 HDDLPAMDNDDTRRGKPTCHKQFDEATAILAGDTLNSLSFQLLSMMDANDPNLLRDSIQI 152 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L G+ GM+ GQM DI++E E+++ I + KTGAL+ + G + A Sbjct: 153 -LHQGAGMTGMILGQMEDIEEEKNPSSNARESKLESIHEKKTGALITSSFLLGNRL-RAD 210 Query: 204 QNEKE-RLRCFGENLGIIFQLADDLLDCEEDL 234 E+E L + + +G++FQ+ DD+LD E +L Sbjct: 211 WKEREFVLTRYAKEIGLLFQITDDILDVEGNL 242 >gi|84624779|ref|YP_452151.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188577762|ref|YP_001914691.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|84368719|dbj|BAE69877.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522214|gb|ACD60159.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 291 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/199 (41%), Positives = 120/199 (60%), Gaps = 9/199 (4%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+R+A+LGG K++R LV +LF A+E IH YSL+HDDLP+MD Sbjct: 30 RLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PTVHI +DE TAI+AG+ L T AFE++++ +R M SL G Sbjct: 90 DDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAA--ASASAELRVGWMQSLATAAGA 147 Query: 157 QGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM GGQ LDI Q + + + Q + +KTGAL+ + GA+ A+ +++RL Sbjct: 148 AGMCGGQALDIDATGQLQPLQDLQ--RMHALKTGALIRASVHMGALTGGAATADQQRLDE 205 Query: 213 FGENLGIIFQLADDLLDCE 231 F + LG+ FQ+ DD+LD E Sbjct: 206 FADALGLAFQVRDDILDVE 224 >gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 299 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 12/208 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPS 94 + A+RY++ GGK++R L + + + + L + +AIE IH YSLIHDDLP+ Sbjct: 33 IYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQIVDEKILDIASAIELIHTYSLIHDDLPA 92 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS---LT 151 MDN +RRGKPT H+ + E AI+AG+ LL A E+ L+ R L+ + L Sbjct: 93 MDNDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMD--WILRYGCRENLIKAAKYLF 150 Query: 152 HNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G++GM+GGQ++DI + D E +F + KT L+ +C GA++A A + Sbjct: 151 WASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVS 210 Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236 L +G+NLG+ FQ+ DD+LD D K Sbjct: 211 DLEEYGKNLGLAFQIRDDVLDVIGDSKK 238 >gi|192362196|ref|YP_001983789.1| geranyltranstransferase [Cellvibrio japonicus Ueda107] gi|190688361|gb|ACE86039.1| geranyltranstransferase [Cellvibrio japonicus Ueda107] Length = 295 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 126/203 (62%), Gaps = 11/203 (5%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR----VGAAIECIHCYSLIHDDL 92 +L +A+RY+L GGK++R L AS +N +L+ + AA+EC+H YSL+HDDL Sbjct: 32 QLRAAMRYSLFNGGKRVRPILA--YASALAINPHISLKQVDPIAAAVECLHAYSLVHDDL 89 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MD+ +RRGKPT HI ++E TAI+AG+GL T AFE++ S + +IR QL+ L Sbjct: 90 PAMDDDDLRRGKPTCHIAFNEATAILAGDGLQTLAFELLGS--IEAPADIRIQLIQVLAK 147 Query: 153 NIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G++GM+ GQ +D+ ++ + Q+ + + KTGAL+ + GA+ A A+ + L Sbjct: 148 GSGVEGMVLGQAIDLAAVEQQLTLEQLETMHRYKTGALIRASVTMGALFAGANNTQLAAL 207 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD D Sbjct: 208 DQYASAIGLAFQVQDDILDVISD 230 >gi|183601043|ref|ZP_02962536.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827] gi|188019381|gb|EDU57421.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827] Length = 305 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 121/197 (61%), Gaps = 5/197 (2%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +A+++ ALLGGK++R FL S+ V+ + AA+ECIH YSLIHDDLP+MD+ Sbjct: 38 LAAAMKHGALLGGKRLRPFLTYTVGSMLGVDSVNLDAPAAAVECIHAYSLIHDDLPAMDD 97 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E AI+AG+ L T AF+++SS + + D R ++ L + GL Sbjct: 98 DDLRRGQPTCHIKFGEGNAILAGDALQTLAFQLLSSAEMPDVTDKDRIAMLSELAYASGL 157 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213 GM GGQ LD++ E +D + I + KTGAL+ A GA A ++ L + Sbjct: 158 AGMCGGQALDLEAEGKRVDLAALERIHQHKTGALIRAAIRMGAYAAGIKGHKALPALDKY 217 Query: 214 GENLGIIFQLADDLLDC 230 E++G+ FQ+ DD+LD Sbjct: 218 AESIGLAFQVQDDILDV 234 >gi|228998970|ref|ZP_04158552.1| Geranyltranstransferase [Bacillus mycoides Rock3-17] gi|229006508|ref|ZP_04164153.1| Geranyltranstransferase [Bacillus mycoides Rock1-4] gi|228754742|gb|EEM04142.1| Geranyltranstransferase [Bacillus mycoides Rock1-4] gi|228760587|gb|EEM09551.1| Geranyltranstransferase [Bacillus mycoides Rock3-17] Length = 297 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 133/222 (59%), Gaps = 6/222 (2%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K T +++ L + A+ +Q + L A+ Y+L GGK++R L+ F Sbjct: 11 KESKTFVEEQLARYANQLQCP--NVLREAMTYSLEAGGKRLRPLLLFATLQAFEKERELG 68 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+GLLT+AF++++ Sbjct: 69 IGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVVT 128 Query: 133 SPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189 + Q + + +L L L G +GM+ GQ+ D++ E ++ +++ I K KTG L+ Sbjct: 129 AYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEYIHKHKTGRLL 188 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 +A +GA++A A+ ++++L F + +G+ FQ+ DD+LD E Sbjct: 189 EYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVE 230 >gi|254248780|ref|ZP_04942100.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia PC184] gi|124875281|gb|EAY65271.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia PC184] Length = 294 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 110/206 (53%), Gaps = 5/206 (2%) Query: 32 QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 +T +L A+RYA+LGG K++R L L AA+E IH YSL+HD Sbjct: 25 ETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+P MD+ +RRGKPTVH+QYDE TA++ G+ L + AF ++ L ++ L+ L Sbjct: 85 DMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA-LSPVQQAALVREL 143 Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK- 207 G GM GGQ +D+ + T Q+ + +MKTGAL+ A GA+ E Sbjct: 144 ALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSAETM 203 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 204 AALDVYAGAVGLAFQVVDDILDVTTD 229 >gi|237740341|ref|ZP_04570822.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31] gi|229422358|gb|EEO37405.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31] Length = 298 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 87/243 (35%), Positives = 131/243 (53%), Gaps = 13/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN L+E + +T L L + + + + + + YALL GGK++R FL+ Sbjct: 1 MNSDFQVYLKEKTNFFETELKKELKELS------YPETIAKGMEYALLNGGKRLRPFLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N + ++ IE IH YSL+HDDLP++DN RRGK T H + E AI+ Sbjct: 55 TTLELLNQDIQKGVKSAIGIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILI 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQMLDIQDE--FIDETQ 176 G+ LLTYAF ++S + + ++S T G+ GM+GGQM+DI+ E I+ Sbjct: 115 GDALLTYAFYMLSEKNLNILSFEQITKIISKTSAYSGVNGMIGGQMIDIESENKKINLET 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I K KTG L+ E I+A S++++ L + E +G+ FQ+ DD+LD E ED Sbjct: 175 LKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFED 234 Query: 234 LPK 236 L K Sbjct: 235 LGK 237 >gi|78485732|ref|YP_391657.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2] gi|78364018|gb|ABB41983.1| farnesyl-diphosphate synthase [Thiomicrospira crunogena XCL-2] Length = 291 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 89/221 (40%), Positives = 130/221 (58%), Gaps = 11/221 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73 R++ L LL Q QT + LL AI+YA L GK++R LV N++ L L Sbjct: 11 RVNQKLKALLDQ-----QTSYPASLLEAIKYATLNNGKRLRPALVYAVGESMNIS-LDKL 64 Query: 74 RVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 A A+E IH YSL+HDDLP+MD+ +RRG+PT HIQ+DE TAI+ G+ T AFE +S Sbjct: 65 DAAACAVELIHSYSLVHDDLPAMDDDDLRRGQPTCHIQFDEATAILVGDAQQTLAFEALS 124 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190 L D+ + +L+ L+H G GM+GGQ++DIQ + +Q+ + +MKTGAL+ Sbjct: 125 Q-DAFLADSDKVKLITLLSHASGGAGMIGGQIIDIQSNGHLPELSQLQKMHEMKTGALIT 183 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + GA + ++ L G+ +G+ FQ+ DD+LD E Sbjct: 184 ASLLMGAAQSTHYPEKQPGLAKLGQKIGLAFQIHDDILDIE 224 >gi|163816790|ref|ZP_02208153.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759] gi|158448047|gb|EDP25042.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759] Length = 313 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/231 (33%), Positives = 126/231 (54%), Gaps = 11/231 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + E ++RID I+ L + +T + A+ Y++ GGK++R L+ E Sbjct: 21 LDKAIAERAERIDGIVAGYLPKVEGFPRT-----VCEAMAYSVEAGGKRLRPMLMEETYR 75 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + AAIE IH YSLIHDDLP++DN RRG+ T H+ + E AI+AG+ L Sbjct: 76 MLGGSTDVVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRQTSHVVFGEAMAILAGDAL 135 Query: 124 LTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM 179 L YA+E + L ++ R S+ + L G+ GMLGGQ++D++ + Q+ Sbjct: 136 LNYAYE-TACKAFDLDEDARKVSEALRILARKPGVYGMLGGQVVDVEMTGRTLTREQLEY 194 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + + KTGAL+ + GA++A A + E + ++G+ FQ+ DD+LD Sbjct: 195 VYENKTGALIEASMMIGAVLAGADSEQVEAVEKIASDIGMAFQVQDDILDV 245 >gi|260596789|ref|YP_003209360.1| geranyltranstransferase [Cronobacter turicensis z3032] gi|260215966|emb|CBA28595.1| Geranyltranstransferase [Cronobacter turicensis z3032] Length = 299 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 120/204 (58%), Gaps = 13/204 (6%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+ Y LLGGK++R FLV +F VN AAIECIH YSL+HDDLP+MD+ Sbjct: 32 LVEAMLYGTLLGGKRLRPFLVYATGEMFGVNPTALDAPAAAIECIHAYSLMHDDLPAMDD 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E +AI+AG+ L T AF I+S +P + R ++ L G+ Sbjct: 92 DDLRRGQPTCHIRFGEASAILAGDALQTLAFSILSDAPMENVALRDRLAMVSELAKASGV 151 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209 GM GGQ LD++ E +D + I + KTGAL+ A GA+ A +K R Sbjct: 152 AGMCGGQALDLEAEGQQVDLDALERIHRHKTGALIRAAVRMGALCA----GDKGRDALVY 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDSYAESIGLAFQVQDDILDVVGD 231 >gi|320197141|gb|EFW71758.1| geranyltranstransferase [Escherichia coli WV_060327] Length = 299 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 119/204 (58%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N L+ ++Y ALLGGK++R FLV +F+V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPLVETMQYGALLGGKRLRPFLVYATGHMFDVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRNALPV 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231 >gi|58582922|ref|YP_201938.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58427516|gb|AAW76553.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 291 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/199 (41%), Positives = 120/199 (60%), Gaps = 9/199 (4%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+R+A+LGG K++R LV +LF A+E IH YSL+HDDLP+MD Sbjct: 30 RLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHTYSLVHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PTVHI +DE TAI+AG+ L T AFE++++ +R M SL G Sbjct: 90 DDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAA--ASASAELRVGWMQSLATAAGA 147 Query: 157 QGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM GGQ LDI Q + + + Q + +KTGAL+ + GA+ A+ +++RL Sbjct: 148 AGMCGGQALDIDATGQLQPLQDLQ--RMHALKTGALIRASVHMGALTGGAATADQQRLDE 205 Query: 213 FGENLGIIFQLADDLLDCE 231 F + LG+ FQ+ DD+LD E Sbjct: 206 FADALGLAFQVRDDILDVE 224 >gi|238791414|ref|ZP_04635052.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909] gi|238729030|gb|EEQ20546.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909] Length = 306 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 119/202 (58%), Gaps = 9/202 (4%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++A+RY A+LGGK++R +LV +F ++ AAIECIH YSLIHDDLP+MD+ Sbjct: 39 LVAAMRYGAVLGGKRLRPYLVYATGQMFGLSLTNLDAPAAAIECIHAYSLIHDDLPAMDD 98 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNI 154 +RRG+PT H+++ E AI+AG+ L T AF I++ P KD R ++ L Sbjct: 99 DDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEANMPDVANKD--RLSMIAELAKAS 156 Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLR 211 G+ GM GGQ LD++ E I T + I + KTGAL+ A GA+ A A L Sbjct: 157 GVAGMCGGQALDLEAEARQISLTNLEQIHRYKTGALIRAAVRLGALAAGAPGRRALPLLD 216 Query: 212 CFGENLGIIFQLADDLLDCEED 233 + E +G+ FQ+ DD+LD D Sbjct: 217 RYSEAIGLAFQVQDDILDVIGD 238 >gi|269797982|ref|YP_003311882.1| polyprenyl synthetase [Veillonella parvula DSM 2008] gi|269094611|gb|ACZ24602.1| Polyprenyl synthetase [Veillonella parvula DSM 2008] Length = 292 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 4/200 (2%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q ++L ++ Y+L+ GGK+IR L + + A+ECIH YSL+HDDL Sbjct: 26 QEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDL 85 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN RRG T H Y E AI+AG+GLLTYAF++++S T + + + Sbjct: 86 PAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTS-NTVASAQQKLDAIKCVAT 144 Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G +GM+GGQ D+ +D+ I ++ ++ KTGAL + E G I+ A++ + L Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGSANKTTRTAL 204 Query: 211 RCFGENLGIIFQLADDLLDC 230 + LG++FQ+ DD+LD Sbjct: 205 MEYSNCLGLLFQITDDILDV 224 >gi|254805697|ref|YP_003083918.1| geranyltranstransferase [Neisseria meningitidis alpha14] gi|254669239|emb|CBA08097.1| geranyltranstransferase [Neisseria meningitidis alpha14] gi|325145254|gb|EGC67533.1| geranyltranstransferase [Neisseria meningitidis M01-240013] Length = 298 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 82/196 (41%), Positives = 116/196 (59%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L V + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGGVVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H+QYDE TA++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHVQYDEATALLVGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157 Query: 161 GGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + Q + Q +KTGAL+ A GA+ + S++ L + L Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|291562669|emb|CBL41485.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium SS3/4] Length = 297 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/243 (32%), Positives = 125/243 (51%), Gaps = 12/243 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + + K +T++ L + H +T + A+ Y++ GGK++R L+ Sbjct: 1 MADNFKERFSQAVKETETVVYSYLPEETGHQKT-----IFEAMNYSVKAGGKRLRPLLMR 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E LF N AA+E IH SLIHDDLP MDN RRGK T Y A++A Sbjct: 56 EVYRLFGGNGPEIKPFMAAMEMIHTSSLIHDDLPCMDNDEYRRGKLTTWKAYGYDMAVLA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 G+ L+ YAFE S + D ++ + L G+ GM+GGQ +D++ + + + Sbjct: 116 GDALMIYAFETASKAFSMGADPAKAGRAIGILAEKTGIYGMIGGQTVDVELTGKAVPREK 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EED 233 + I ++KTGAL+ + GA++A A+ E + + +G+ FQ+ DD+LD +E+ Sbjct: 176 LDFIYRLKTGALLEASMMIGAVLAGATVEEIKEVETMASEVGLAFQIQDDILDVTSTQEE 235 Query: 234 LPK 236 L K Sbjct: 236 LGK 238 >gi|121610223|ref|YP_998030.1| polyprenyl synthetase [Verminephrobacter eiseniae EF01-2] gi|121554863|gb|ABM59012.1| farnesyl-diphosphate synthase [Verminephrobacter eiseniae EF01-2] Length = 314 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 19/207 (9%) Query: 42 AIRYALL-GGKKIRSFLV------------TECASLFNVNHLTALRVGAAIECIHCYSLI 88 A+RYA+L GGK++R LV CA + ALR A+E IH YSL+ Sbjct: 46 AMRYAVLDGGKRLRPLLVLAAYQAVCSGQPAPCA----WHDAAALRAACAVELIHAYSLV 101 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP MDN +RRGKPT H+++ A++AG+ L +AFE+++ + ++ L Sbjct: 102 HDDLPCMDNDVLRRGKPTAHVRFGPARALLAGDALQAFAFELLTPEDMPIPAATQAALCR 161 Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L G GM GGQ +D+ + E Q+ + ++KTGAL+ + GA+ A+ Sbjct: 162 LLARAAGSTGMAGGQAIDLASVGLRLTEGQLRQMHRLKTGALLQASVLMGAVCGQAAPAA 221 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 L +G LG+ FQ+ DD+LD D Sbjct: 222 YRALSDYGAALGLAFQVVDDILDVVAD 248 >gi|255321733|ref|ZP_05362888.1| geranyltranstransferase [Campylobacter showae RM3277] gi|255301213|gb|EET80475.1| geranyltranstransferase [Campylobacter showae RM3277] Length = 388 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/195 (36%), Positives = 117/195 (60%), Gaps = 6/195 (3%) Query: 42 AIRYAL-LGGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 A+ Y L GGK R+ LV A++ A V A E +H YSLIHDDLP+MD+ Sbjct: 134 ALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAAFHVALAFETMHSYSLIHDDLPAMDDSD 193 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+P++H+++DEVTAI+AG+ L T+AF I+ K L ++R + + L+ N G+ GM Sbjct: 194 LRRGQPSLHVKFDEVTAILAGDALNTHAFYQIA--KAPLDADVRIKCVEILSRNAGIYGM 251 Query: 160 LGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ +D +++ + ++ + KT L+ + ++G ++A + E R+ G +L Sbjct: 252 ALGQAVDCYFENQKLGLEELKFLHIHKTARLIAASLQAGCVVAGLDEAEAARIYDIGLDL 311 Query: 218 GIIFQLADDLLDCEE 232 G+ FQ+ADD++D + Sbjct: 312 GLAFQIADDIIDATQ 326 >gi|308388479|gb|ADO30799.1| geranyltranstransferase [Neisseria meningitidis alpha710] gi|325130987|gb|EGC53714.1| geranyltranstransferase [Neisseria meningitidis OX99.30304] gi|325137086|gb|EGC59682.1| geranyltranstransferase [Neisseria meningitidis M0579] gi|325202912|gb|ADY98366.1| geranyltranstransferase [Neisseria meningitidis M01-240149] gi|325207289|gb|ADZ02741.1| geranyltranstransferase [Neisseria meningitidis NZ-05/33] Length = 298 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAVLDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT HI+Y E TA++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHIKYGEATALLVGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + + + + +KTGAL+ A GA+ + S++ L + L Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|320546351|ref|ZP_08040668.1| geranyltranstransferase [Streptococcus equinus ATCC 9812] gi|320449005|gb|EFW89731.1| geranyltranstransferase [Streptococcus equinus ATCC 9812] Length = 289 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 114/196 (58%), Gaps = 6/196 (3%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L+ AI Y++ GGK++R + E F V A V AA+E IH SLIHDDLP+MD Sbjct: 25 LIEAILYSVDGGGKRVRPLIFLELLEGFGVALTDAHYDVAAALEMIHTGSLIHDDLPAMD 84 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRG+ T H +++E TAI+AG+ L ++++++ +L ++ L+ L H G Sbjct: 85 NDDYRRGRLTNHKKFNEATAILAGDSLFLDPYDLVAN--AELSAEVKVALIAELAHASGT 142 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQMLD++ E + +++ +I KTG L+ F + I+A + + LR G Sbjct: 143 YGMVGGQMLDMEGEERKLSLSELQLIHANKTGKLLTFPVVAAGIVAGLAGEDINNLRKAG 202 Query: 215 ENLGIIFQLADDLLDC 230 +G+ FQ+ DD+LD Sbjct: 203 SLIGLAFQVRDDILDV 218 >gi|208434832|ref|YP_002266498.1| geranyltrans transferase [Helicobacter pylori G27] gi|208432761|gb|ACI27632.1| geranyltrans transferase [Helicobacter pylori G27] Length = 303 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 124/214 (57%), Gaps = 13/214 (6%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLQKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G ++A Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMG-LVAS 202 Query: 202 ASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233 +NE+ + L+ FG G+ FQ+ DD++D +D Sbjct: 203 GIKNEELFKWLQAFGLKTGLCFQVLDDIIDVTQD 236 >gi|315652073|ref|ZP_07905074.1| geranyltranstransferase [Eubacterium saburreum DSM 3986] gi|315485720|gb|EFU76101.1| geranyltranstransferase [Eubacterium saburreum DSM 3986] Length = 297 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 81/220 (36%), Positives = 120/220 (54%), Gaps = 10/220 (4%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG---AAI 79 L+++ + + + N ++ A A+ GGK++R ++ E + + + + AAI Sbjct: 13 LIESFFYNEDELNKNVIKASNEAIRNGGKRLRPLIMFETYKAISGDEYSEEIIAPFLAAI 72 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH +SLIHDDLP+MDN +RRGKPT + Y E AI+AG+ L AFEIIS + Sbjct: 73 EMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLSVQAFEIISKKMQETD 132 Query: 140 D-NI---RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFAC 193 D NI S+ M +L G GM+GGQ +D++ T+ M +KTGAL+ + Sbjct: 133 DFNILKRMSRAMYTLARATGAFGMIGGQCVDVEYSGKKMTEEVMKYTYALKTGALLAASF 192 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 G I+A AS+ E L+ G +G FQ+ DD LD D Sbjct: 193 VVGGILAGASETEVRLLKKAGSYVGEAFQIRDDYLDIVAD 232 >gi|260588126|ref|ZP_05854039.1| geranyltranstransferase [Blautia hansenii DSM 20583] gi|331082306|ref|ZP_08331432.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541653|gb|EEX22222.1| geranyltranstransferase [Blautia hansenii DSM 20583] gi|330400792|gb|EGG80393.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium 6_1_63FAA] Length = 296 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 14/233 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 ++LQE + + +++ L + + + R+ A+ Y++ GGK++R + E Sbjct: 3 FKTELQERTDFAEAVIEKYLPE-----EHGFSGRMAEAVNYSMRAGGKRLRPVFMREAYQ 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + AA+E +H +SLIHDDLP++DN RRGK T HI + E AI+AG+ L Sbjct: 58 ILGGEGEIIEPFMAALEMVHTHSLIHDDLPALDNDEFRRGKQTTHIVFGEAAAILAGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 L YA+E S KD Q + L G++GMLGGQ +D++++ +++ + Sbjct: 118 LNYAYETAFSAFDMAKDEAELQRVAKALKVLAQKTGIKGMLGGQGVDVENDGKPLEKQLL 177 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I + KT AL+ A G I+A A+ EK L G +GI FQ+ DD+LD Sbjct: 178 DYIYENKTSALIEAALMVGGILAGATDIEK--LEQIGSKIGIAFQIQDDILDV 228 >gi|307726551|ref|YP_003909764.1| polyprenyl synthetase [Burkholderia sp. CCGE1003] gi|307587076|gb|ADN60473.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003] Length = 293 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 108/200 (54%), Gaps = 6/200 (3%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RYA+LGG K++R L L AA+E IH YSL+HDD+P MD Sbjct: 31 KLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH++YDE TA++ G+ L + AF +S L ++ L+ L G Sbjct: 91 DDALRRGKPTVHVKYDEATALLVGDALQSQAF--VSLTSDVLAPAQQAALVRELALASGS 148 Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCF 213 GM GGQ +D+ + Q+ + +MKTGAL+ A GA+ A N L + Sbjct: 149 VGMCGGQAIDLASVGHTLTRAQLETMHRMKTGALLRAAVRMGALAGEAPDANAMRSLDAY 208 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 209 SAAVGLAFQVVDDILDVTTD 228 >gi|87307782|ref|ZP_01089925.1| geranylgeranyl pyrophosphate synthetase (precursor) [Blastopirellula marina DSM 3645] gi|87289396|gb|EAQ81287.1| geranylgeranyl pyrophosphate synthetase (precursor) [Blastopirellula marina DSM 3645] Length = 298 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 87/222 (39%), Positives = 119/222 (53%), Gaps = 7/222 (3%) Query: 17 DTILD--DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73 DT+ D D L S DRL AIRY+LL GK++R L A + A+ Sbjct: 14 DTLRDEVDQALNVYSSFGEGCPDRLQEAIRYSLLAPGKRLRPLLTLMAAETCGSDRTQAM 73 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSLIHDDLP+MD+ +RRG+PT H +DE TAI+AG+ LL A EI++ Sbjct: 74 PSACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHKAFDEATAILAGDALLARALEIVAD 133 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 RS L G ++GGQ D+ ++F D + I + KTGA++C Sbjct: 134 GYQDPLVAARS--CRELAKAAGATALVGGQADDLNEQFGSGDVEMLKAIHRRKTGAMICV 191 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GAI A A + +L +GE +G+ FQ+ DDLLD D Sbjct: 192 SLRLGAIAAGADDQQVAQLNLYGEQIGLAFQIVDDLLDYAGD 233 >gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ] gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ] Length = 297 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/231 (36%), Positives = 126/231 (54%), Gaps = 15/231 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+E +D L+ L + Q+ H A+RY++ GGK++R L+ Sbjct: 7 LKEKIALVDAALEQYLPKEEERPQSLHK-----AMRYSIFAGGKRVRPVLMLAACEAVGG 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+ A+E IH YSLIHDDLP+MD+ RRG+PT H + E AI+AG+GLLT A Sbjct: 62 QIDKAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDGLLTEA 121 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF---IDETQVFMI 180 F+++S P+ I L + H I G GM+GGQ++D++ E +D V I Sbjct: 122 FKLMSDPR--FAAGIDPAARLGVIHEIATCAGTYGMVGGQVVDMESEGKPDMDLPTVQYI 179 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 KTGAL+ + +GA++ A + +R +GE G+ FQ+ADD+LD E Sbjct: 180 HAHKTGALIKASVVAGALLGGADDKQLAAIRRYGEAAGLAFQIADDILDIE 230 >gi|314933695|ref|ZP_07841060.1| geranyltranstransferase [Staphylococcus caprae C87] gi|313653845|gb|EFS17602.1| geranyltranstransferase [Staphylococcus caprae C87] Length = 288 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/210 (40%), Positives = 125/210 (59%), Gaps = 6/210 (2%) Query: 29 SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 SH+ T + ++ +++ GGK+IR L+ ++ N ++ L+ A+E IH YSLI Sbjct: 19 SHLNTDLEESMMYSLQ---AGGKRIRPVLLLLTLNMLNEDYHKGLQSALALEMIHTYSLI 75 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MD+ RRGK T H Y E AI+AG+ LLT AFE++S+ ++DN++ +++ Sbjct: 76 HDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDDL-IEDNVKVKVLQ 134 Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L+ G GM+GGQ LD+Q E +D + I K KTGAL+ FA + +A Q Sbjct: 135 RLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIHKAKTGALLTFAVMAAVDIAQVDQKT 194 Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L F E+LG++FQ+ DDLLD D K Sbjct: 195 SHNLNEFSEHLGLMFQIKDDLLDVYGDEKK 224 >gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 299 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 135/246 (54%), Gaps = 23/246 (9%) Query: 5 LPSKLQE----NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 + KL+E + K+++ L+ +L + + + Q A+RY++ GGK++R L Sbjct: 2 ISRKLEEYIYLSQKKVEENLEKILKERSPEIIYQ-------AMRYSVFAGGKRLRPLLCL 54 Query: 60 ECASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 + + + + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A Sbjct: 55 LSYQMVSKDQIVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIA 114 Query: 117 IIAGNGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173 I+AG+ LL A E+ + K+ +++ L G++GM+GGQ++DI + D Sbjct: 115 ILAGDALLNLAAEVCMDWILRYGCDKNLVKAAKYLFWAS--GVEGMIGGQVIDITNSGQD 172 Query: 174 ---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 E +F + KT L+ +C GA++A A + L +G+NLG+ FQ+ DD+LD Sbjct: 173 IKSEELLFEMHLKKTSRLIQASCVCGALVAAAEDDVVSDLEEYGKNLGLAFQIRDDVLDV 232 Query: 231 EEDLPK 236 D K Sbjct: 233 IGDSKK 238 >gi|311087355|gb|ADP67435.1| geranyltranstransferase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 282 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 120/207 (57%), Gaps = 13/207 (6%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL A++Y++ G K++RS L+ +F VN T + AIE IH YSLIHDDLP MDN Sbjct: 32 LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156 RRGK + H++Y E T+++AG+ L + AF I+S+ N++ M+S L+++IG Sbjct: 92 DNFRRGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGS 151 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209 GM GQ LD++ E ++ +++ +I KT LM S + + S N + Sbjct: 152 SGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM----RSAVRLVYFSSNNFSKSILSI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236 L F ++G+ FQ+ DD+LD ++D K Sbjct: 208 LDLFSISIGLAFQIQDDILDFKKDSVK 234 >gi|219682370|ref|YP_002468754.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219622103|gb|ACL30259.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086767|gb|ADP66848.1| geranyltranstransferase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 282 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 119/204 (58%), Gaps = 13/204 (6%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL A++Y++ G K++RS L+ +F VN T + AIE IH YSLIHDDLP MDN Sbjct: 32 LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156 RRGK + H++Y E T+++AG+ L + AF I+S+ N++ M+S L+++IG Sbjct: 92 DNFRRGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGS 151 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209 GM GQ LD++ E ++ +++ +I KT LM S + + S N + Sbjct: 152 SGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM----RSAVRLVYFSSNNFSKSILSI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L F ++G+ FQ+ DD+LD ++D Sbjct: 208 LDLFSISIGLAFQIQDDILDFKKD 231 >gi|315931387|gb|EFV10356.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 327] Length = 281 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT+ Sbjct: 36 GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 96 HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNTGLNGMVIGQAIDC 153 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ D Sbjct: 154 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213 Query: 226 DLLDC 230 D++D Sbjct: 214 DIIDV 218 >gi|317177716|dbj|BAJ55505.1| geranyltranstransferase [Helicobacter pylori F16] Length = 303 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 123/213 (57%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ+LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSANGGIKGMVLGQVLDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236 >gi|217033116|ref|ZP_03438579.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128] gi|298736116|ref|YP_003728641.1| geranyltranstransferase IspA [Helicobacter pylori B8] gi|216945159|gb|EEC23852.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128] gi|298355305|emb|CBI66177.1| geranyltranstransferase (IspA) [Helicobacter pylori B8] Length = 303 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 124/214 (57%), Gaps = 13/214 (6%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G ++A Sbjct: 144 VELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMG-LVAS 202 Query: 202 ASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233 +NE+ + L+ FG G+ FQ+ DD++D +D Sbjct: 203 GIKNEELLKWLQAFGLKTGLCFQVLDDIIDVTQD 236 >gi|256957073|ref|ZP_05561244.1| polyprenyl synthetase [Enterococcus faecalis DS5] gi|256947569|gb|EEU64201.1| polyprenyl synthetase [Enterococcus faecalis DS5] gi|315034211|gb|EFT46143.1| geranyltranstransferase [Enterococcus faecalis TX0027] Length = 293 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKT 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G I+A+ ++ L Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGILANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|15617063|ref|NP_240276.1| geranyltranstransferase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681815|ref|YP_002468201.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471517|ref|ZP_05635516.1| geranyltranstransferase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11386920|sp|P57537|ISPA_BUCAI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|25403631|pir||B84984 geranyltranstransferase (EC 2.5.1.10) [imported] - Buchnera sp. (strain APS) gi|10039128|dbj|BAB13162.1| geranyltranstransferase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624658|gb|ACL30813.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 282 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 119/204 (58%), Gaps = 13/204 (6%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL A++Y++ G K++RS L+ +F VN T + AIE IH YSLIHDDLP MDN Sbjct: 32 LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156 RRGK + H++Y E T+++AG+ L + AF I+S+ N++ M+S L+++IG Sbjct: 92 DNFRRGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGS 151 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209 GM GQ LD++ E ++ +++ +I KT LM S + + S N + Sbjct: 152 SGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM----RSAVRLVYFSSNNFSKSILSI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L F ++G+ FQ+ DD+LD ++D Sbjct: 208 LDLFSISIGLAFQIQDDILDFKKD 231 >gi|238019305|ref|ZP_04599731.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748] gi|237864004|gb|EEP65294.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748] Length = 292 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 111/195 (56%), Gaps = 4/195 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L ++ Y+L+ GGK+IR L + + + A+ECIH YSL+HDDLP+MDN Sbjct: 31 LYESMNYSLMQGGKRIRPILSKAVLEMLHKDPADYKEFLCAMECIHTYSLVHDDLPAMDN 90 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG T H Y E AI+AG+GLLTYAF+++++ +T + T G + Sbjct: 91 DDYRRGNLTNHKVYGEGMAILAGDGLLTYAFQLMTANETATAQEKLDAIQCVAT-AAGPE 149 Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ D+ +D+ I ++ ++ + KTGAL + E G I+ +A + L + Sbjct: 150 GMVGGQAFDMLSEDKHIPLEELKVLHRGKTGALFNASVELGLILGNADTATRTALMEYAN 209 Query: 216 NLGIIFQLADDLLDC 230 LG++FQ+ DD+LD Sbjct: 210 CLGLLFQITDDILDV 224 >gi|315586874|gb|ADU41255.1| geranyltranstransferase [Helicobacter pylori 35A] Length = 303 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/229 (33%), Positives = 129/229 (56%), Gaps = 15/229 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNV 67 KR ++ L+ L H+++ H + L GGK+ R FL CA + ++ Sbjct: 14 KRFESFLNHHHL----HLESFHPYLKKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+ Sbjct: 70 QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185 FE++S+ + L+ +I +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT Sbjct: 130 FELLSN--SLLESHIIVELIKILSTNGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKT 187 Query: 186 GALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 L+ + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236 >gi|325276613|ref|ZP_08142352.1| polyprenyl synthetase [Pseudomonas sp. TJI-51] gi|324098253|gb|EGB96360.1| polyprenyl synthetase [Pseudomonas sp. TJI-51] Length = 295 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 128/225 (56%), Gaps = 10/225 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 +R+D L+ L + T+ +RL +A+RY+++ GGK++R L A Sbjct: 11 RRVDAALEPLFVAP-----TKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQA 65 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF + Sbjct: 66 NGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALL 125 Query: 133 SPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 P + D++R ++ +L G GM+GGQ +D+ +D+ + + + KTGAL+ Sbjct: 126 DPHLSPQADSVRLAMVQALATAAGPAGMVGGQAIDLGSVGLKLDQRALAFMHRHKTGALI 185 Query: 190 CFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ A A Q + + L+ + + +G+ FQ+ DD+LD E D Sbjct: 186 EASVRLGALASARAGQQQLDALQTYAQAIGLAFQVQDDILDVEGD 230 >gi|254779530|ref|YP_003057636.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Helicobacter pylori B38] gi|254001442|emb|CAX29437.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Helicobacter pylori B38] Length = 303 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISTSLMMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236 >gi|167627431|ref|YP_001677931.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597432|gb|ABZ87430.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 293 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 115/201 (57%), Gaps = 15/201 (7%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A++Y+ GGK+IR+ V FN++ ++ AIECIH YSLIHDDLP+MD Sbjct: 27 KLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCHKIAFAIECIHTYSLIHDDLPAMD 86 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIG 155 N +RRGKPT HI+++E TAI+AG+ L + FEII++ + D + ++ + G Sbjct: 87 NDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINT--LDINDIYKLKKVNIVFAKCCG 144 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEKER 209 L+GM+GGQ LDI E Q +Q + KT + + I++ + +E E Sbjct: 145 LEGMVGGQQLDID----GENQNLKLQDLEILHINKTAKMFRASIVLPYIVSKYNNDEFET 200 Query: 210 -LRCFGENLGIIFQLADDLLD 229 L + +G+ FQ+ DD+LD Sbjct: 201 ILTKVSDLIGLCFQIKDDILD 221 >gi|188527752|ref|YP_001910439.1| geranyltranstransferase [Helicobacter pylori Shi470] gi|188143992|gb|ACD48409.1| geranyltranstransferase [Helicobacter pylori Shi470] gi|308063758|gb|ADO05645.1| geranyltranstransferase [Helicobacter pylori Sat464] Length = 303 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSSQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGFVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236 >gi|160915116|ref|ZP_02077329.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991] gi|158432915|gb|EDP11204.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991] Length = 280 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 118/209 (56%), Gaps = 19/209 (9%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + ++ A+ Y+LL GGK+IR L+ + + AAIE IH YSLIHDDLP+ Sbjct: 17 DSKVKEAMLYSLLAGGKRIRPQLLFSALKAYGIAEEKGFPCAAAIEMIHTYSLIHDDLPA 76 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRG+PT HIQ+DE TAI+AG+ LLT AF + LK + + ++SL I Sbjct: 77 MDDDTLRRGRPTCHIQFDEATAILAGDALLTQAFHEV------LKSDATASQLVSLESLI 130 Query: 155 ----GLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEK 207 G GM+ GQ+ D++ E + + +Q++ KTG L+ A++A+ + + Sbjct: 131 SSYSGANGMVLGQIYDLEAEGRCDVSIEALQRVHEYKTGKLITLPLLCAAVLAN-HEEDF 189 Query: 208 ERLRCFGENLGIIFQLADDLLD----CEE 232 E + G +G+ FQ+ DD+ D CEE Sbjct: 190 EVWKSIGYAMGLSFQIQDDVFDVTSTCEE 218 >gi|331701507|ref|YP_004398466.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929] gi|329128850|gb|AEB73403.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929] Length = 297 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 7/186 (3%) Query: 49 GGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L ASL + T L+ A+E +H YSLIHDDLP+MDN +RRGKPT Sbjct: 44 GGKRLRPLLTLAVLASLGDPIDQTVLKTSCALELMHSYSLIHDDLPAMDNDDLRRGKPTN 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H+++ A +AG+GL AF+ + L +++L L+L G GM+ GQ DI Sbjct: 104 HVKFGAGMATLAGDGLQPLAFQWLVD--NDLDSQTQAELTLALAKAAGPHGMVSGQADDI 161 Query: 168 QDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + E + +QK+ KTGAL+ +A E+G IM +++ L F E G +Q+ Sbjct: 162 EFEGT-RLSLSGLQKLDRNKTGALIRYAVEAGLIMGRVIPEKRKSLLTFAEKFGEAYQIY 220 Query: 225 DDLLDC 230 DD+LD Sbjct: 221 DDILDV 226 >gi|295706547|ref|YP_003599622.1| geranyltranstransferase [Bacillus megaterium DSM 319] gi|294804206|gb|ADF41272.1| geranyltranstransferase [Bacillus megaterium DSM 319] Length = 298 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 82/222 (36%), Positives = 131/222 (59%), Gaps = 12/222 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74 R++T L +++ A H + +L ++ GGK++R L+ F + L Sbjct: 17 RVETRLPEVV--KALHAPVNLKESMLYSLTA---GGKRLRPVLLFATLHAFGKDESMGLE 71 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-S 133 A+E IH YSLIHDDLPSMD+ +RRGKPT H Y E TAI+AG+ LLT +F++IS + Sbjct: 72 TACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQLISEA 131 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALM 189 ++ +++ QL+ L G +GM+ GQ+ D++ E +DE + + KTG L+ Sbjct: 132 AHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLH--KTGKLL 189 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 F ++GAI+A A+ ++E L F +++G+ FQ+ DD+LD E Sbjct: 190 GFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVE 231 >gi|57168796|ref|ZP_00367927.1| geranyltranstransferase (ispA) [Campylobacter coli RM2228] gi|305432462|ref|ZP_07401624.1| geranyltranstransferase [Campylobacter coli JV20] gi|57019843|gb|EAL56526.1| geranyltranstransferase (ispA) [Campylobacter coli RM2228] gi|304444501|gb|EFM37152.1| geranyltranstransferase [Campylobacter coli JV20] Length = 279 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 7/185 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK R+ L+ HL AL A+E IH YSLIHDDLP+MDN +RRG PT Sbjct: 34 GGKHFRAQLLLGVVQ-NKAPHLIPNALNAALALEFIHTYSLIHDDLPAMDNADLRRGTPT 92 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H YDE TAI+ G+ L T AF ++S+ LK++I+ L+ +L N G+ GM+ GQ +D Sbjct: 93 LHKSYDETTAILVGDALNTEAFLLLSN--LNLKESIKINLIRTLAFNAGINGMILGQAID 150 Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D+ ++ ++ + KT L+ A + G + + E E++ G LG+IFQ+ Sbjct: 151 CYFEDKKLNLEELEFLHTHKTAKLIAAALKMGCEICELDEKESEKIYQIGLKLGLIFQIN 210 Query: 225 DDLLD 229 DD++D Sbjct: 211 DDIID 215 >gi|149928102|ref|ZP_01916349.1| geranyltranstransferase [Limnobacter sp. MED105] gi|149823188|gb|EDM82425.1| geranyltranstransferase [Limnobacter sp. MED105] Length = 300 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 116/202 (57%), Gaps = 9/202 (4%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDL 92 + L +A+ YALL GGK++R+ LV A+ + V T+ AA IE +H YSL+HDDL Sbjct: 34 SSELNAAMEYALLDGGKRLRAMLV--FAAGYAVETPTSQLNDAACSIEAMHAYSLVHDDL 91 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 PSMDN +RRGKPT H+++ E A++AG+ L T AF+ ++ Q +R Q + +L Sbjct: 92 PSMDNDVLRRGKPTCHVKFGEAFALLAGDALQTAAFQWLAE-SNQGSVQVRMQQIAALAS 150 Query: 153 NIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKER 209 GLQGM GQ +D+ + +D + + KTG L+ + G + A S EK Sbjct: 151 AAGLQGMAAGQAIDLAHVGKPMDLQSLATMHARKTGDLITASVRMGYVSNATLSAVEKNG 210 Query: 210 LRCFGENLGIIFQLADDLLDCE 231 L + LG+ +Q+ DD+LD E Sbjct: 211 LEAYAHCLGLAYQVIDDILDVE 232 >gi|330962412|gb|EGH62672.1| CrtE [Pseudomonas syringae pv. maculicola str. ES4326] Length = 304 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 13/241 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY---ALLGGKKIRSFL 57 ++ GL L +RI+ L+DLL N+R L AI L GK++R L Sbjct: 12 LDSGLTEHLASVRERIEKRLNDLL-------PAGGNERDLVAIAMREGTLAPGKRVRPML 64 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 + A + AL +G A+E IH SL+ DD+P MD+ +RRG PTVH+++ + AI Sbjct: 65 LMLAADGLGHDSSAALELGCAVEMIHAASLVLDDMPCMDDARLRRGLPTVHLKFGQDVAI 124 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175 +A LL+ AF +++ +++ +R+QL+ L + +G+QG++ GQ D+ D D Sbjct: 125 LAAVALLSRAFGVVAG-ISEVPPAVRTQLVGVLANAVGMQGLVRGQFQDLHDGLHSRDAE 183 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q+ ++KTG L + ++++ A + + L+ F LG FQL DDL D D Sbjct: 184 QIATTNRLKTGVLFSAIMDMASLVSGADEGTRAGLQDFATELGQAFQLYDDLQDKSADNA 243 Query: 236 K 236 K Sbjct: 244 K 244 >gi|294791863|ref|ZP_06757011.1| geranyltranstransferase [Veillonella sp. 6_1_27] gi|294457093|gb|EFG25455.1| geranyltranstransferase [Veillonella sp. 6_1_27] Length = 292 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 112/200 (56%), Gaps = 4/200 (2%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q ++L ++ Y+L+ GGK+IR L + + A+ECIH YSL+HDDL Sbjct: 26 QEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDL 85 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN RRG T H Y E AI+AG+GLLTYAF++++S T + + + Sbjct: 86 PAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTS-NTVASAQQKLDAIKCVAT 144 Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G +GM+GGQ D+ +D+ I ++ ++ KTGAL + E G I+ A+ + L Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGSANNTTRTAL 204 Query: 211 RCFGENLGIIFQLADDLLDC 230 + LG++FQ+ DD+LD Sbjct: 205 MEYSNCLGLLFQITDDILDV 224 >gi|283953738|ref|ZP_06371269.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 414] gi|283794779|gb|EFC33517.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 414] Length = 279 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 104/188 (55%), Gaps = 13/188 (6%) Query: 49 GGKKIRSFLVTECA-----SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK R+ L+ L N AL A+E IH YSLIHDDLPSMDN RRG Sbjct: 34 GGKHFRAQLLLSVVQSNKPELIN----QALDAALALEFIHTYSLIHDDLPSMDNADFRRG 89 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 PT+H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ Sbjct: 90 IPTLHKSYDETTAILVGDALNTEAFLVLSH--ANLKDEIKIKLIKTLAFNAGLNGMVIGQ 147 Query: 164 MLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 +D +D+ + ++ + KT L+ A + G + S E ++ G LG+IF Sbjct: 148 AIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICQLSNEESNQIYKLGLKLGLIF 207 Query: 222 QLADDLLD 229 Q+ DD++D Sbjct: 208 QINDDIID 215 >gi|209517792|ref|ZP_03266627.1| Polyprenyl synthetase [Burkholderia sp. H160] gi|209501738|gb|EEA01759.1| Polyprenyl synthetase [Burkholderia sp. H160] Length = 293 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 119/224 (53%), Gaps = 11/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R++T L+ L +T L A+RYA+LGG K++R L L Sbjct: 12 ERVETALEHYL-----PAETTEPAGLHGAMRYAVLGGGKRVRPLLCHAAGELTGARAECL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L + AF +++ Sbjct: 67 DAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVVLT 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190 S + ++ L+ L G GM GGQ +D+ + Q+ + +MKTGAL+ Sbjct: 127 SDVLGVPQ--QASLVRELALASGSIGMCGGQAIDLASVGHTLTRPQLETMHRMKTGALLR 184 Query: 191 FACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 A GA+ A + L + +G+ FQ+ DD+LD D Sbjct: 185 AAVRMGALAGEAPDAKALASLDAYAAAVGLAFQVVDDILDVTTD 228 >gi|157415864|ref|YP_001483120.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116] gi|157386828|gb|ABV53143.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116] gi|307748501|gb|ADN91771.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni M1] Length = 281 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT+ Sbjct: 36 GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 96 HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ D Sbjct: 154 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213 Query: 226 DLLDC 230 D++D Sbjct: 214 DIIDV 218 >gi|57238655|ref|YP_179786.1| geranyltranstransferase [Campylobacter jejuni RM1221] gi|57167459|gb|AAW36238.1| geranyltranstransferase [Campylobacter jejuni RM1221] gi|315059094|gb|ADT73423.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Campylobacter jejuni subsp. jejuni S3] Length = 281 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT+ Sbjct: 36 GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 96 HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ D Sbjct: 154 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213 Query: 226 DLLDC 230 D++D Sbjct: 214 DIIDV 218 >gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp. lyrata] gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp. lyrata] Length = 372 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 108/198 (54%), Gaps = 16/198 (8%) Query: 42 AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GK++R L L A+ A+E IH SLI DDLP MDN + Sbjct: 111 AMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDL 170 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML----SLTHNIGL 156 RRGKPT H Y E AI++G LL+ AFE +++ + I S+ M+ L +IG Sbjct: 171 RRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAE------ISSERMVWAVRELARSIGT 224 Query: 157 QGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLR 211 +G++ GQ +DI E +D +V + I KT L+ A GAI+ S E E +R Sbjct: 225 RGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVR 284 Query: 212 CFGENLGIIFQLADDLLD 229 F +G++FQ+ DD+LD Sbjct: 285 KFARCIGLLFQVVDDILD 302 >gi|153952306|ref|YP_001398921.1| geranyltranstransferase [Campylobacter jejuni subsp. doylei 269.97] gi|152939752|gb|ABS44493.1| geranyltranstransferase [Campylobacter jejuni subsp. doylei 269.97] Length = 281 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT+ Sbjct: 36 GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 96 HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ D Sbjct: 154 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213 Query: 226 DLLDC 230 D++D Sbjct: 214 DIIDV 218 >gi|311086191|gb|ADP66273.1| geranyltranstransferase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311087854|gb|ADP67933.1| geranyltranstransferase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 301 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 120/207 (57%), Gaps = 13/207 (6%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL A++Y++ G K++RS L+ +F VN T + AIE IH YSLIHDDLP MDN Sbjct: 32 LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156 RRGK + H++Y E T+++AG+ L + AF I+S+ N++ M+S L+++IG Sbjct: 92 DNFRRGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGS 151 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209 GM GQ LD++ E ++ +++ +I KT LM S + + S N + Sbjct: 152 SGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM----RSAVRLVYFSSNNFSKSILSI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236 L F ++G+ FQ+ DD+LD ++D K Sbjct: 208 LDLFSISIGLAFQIQDDILDFKKDSVK 234 >gi|294501200|ref|YP_003564900.1| geranyltranstransferase [Bacillus megaterium QM B1551] gi|294351137|gb|ADE71466.1| geranyltranstransferase [Bacillus megaterium QM B1551] Length = 298 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 82/222 (36%), Positives = 131/222 (59%), Gaps = 12/222 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74 R++T L +++ A H + +L ++ GGK++R L+ F + L Sbjct: 17 RVETRLPEVV--KALHAPVNLKESMLYSLTA---GGKRLRPVLLFATLHAFGKDESMGLE 71 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-S 133 A+E IH YSLIHDDLPSMD+ +RRGKPT H Y E TAI+AG+ LLT +F++IS + Sbjct: 72 TACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQLISEA 131 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALM 189 ++ +++ QL+ L G +GM+ GQ+ D++ E +DE + + KTG L+ Sbjct: 132 AHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLH--KTGKLL 189 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 F ++GAI+A A+ ++E L F +++G+ FQ+ DD+LD E Sbjct: 190 GFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVE 231 >gi|260438375|ref|ZP_05792191.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876] gi|292808961|gb|EFF68166.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876] Length = 297 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 120/219 (54%), Gaps = 5/219 (2%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 RI T D +++ + N L A+ Y++ GGK++R L+ LF + Sbjct: 8 RIRTDYADNVVKEFLSKEEGFNKELCEAMNYSVNAGGKRLRPILLHTFYKLFGGDSDIVK 67 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IIS 132 AA E +H YSL+HDDLP++DN RRG PT H ++ E TAI+AG+GLL A+E I Sbjct: 68 PCMAAYEMLHTYSLVHDDLPAIDNDNYRRGMPTTHARFGEATAILAGDGLLHQAYETFIK 127 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMC 190 T++ L + G+ GMLGGQ D+ E I + ++ I + KTGAL+ Sbjct: 128 IFDTEISTRTVKALKI-FGDKTGINGMLGGQSADVLHTGEIISDELLYYIYEKKTGALIE 186 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A +G+++A + + +++ GE +G+ FQ+ DD+LD Sbjct: 187 GAMLTGSVLAGCNDEDLAKIKRVGELVGLAFQIKDDILD 225 >gi|241668001|ref|ZP_04755579.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876535|ref|ZP_05249245.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842556|gb|EET20970.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 293 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 115/201 (57%), Gaps = 15/201 (7%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A++Y+ GGK+IR+ V FN++ ++ AIECIH YSLIHDDLP+MD Sbjct: 27 KLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCHKIAFAIECIHTYSLIHDDLPAMD 86 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIG 155 N +RRGKPT HI+++E TAI+AG+ L + FEII++ + D + ++ + G Sbjct: 87 NDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINT--LDINDIYKLKKVNIVFAKCCG 144 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEKER 209 L+GM+GGQ LDI E Q +Q + KT + + I++ + +E E Sbjct: 145 LEGMVGGQQLDID----GENQNLKLQDLEILHINKTAKMFRASIVLPYIVSKYNNDEFEA 200 Query: 210 -LRCFGENLGIIFQLADDLLD 229 L + +G+ FQ+ DD+LD Sbjct: 201 ILTKVSDLIGLCFQIKDDILD 221 >gi|86149392|ref|ZP_01067623.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6] gi|86153173|ref|ZP_01071378.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596676|ref|ZP_01099913.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25] gi|148925783|ref|ZP_01809471.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486] gi|218563233|ref|YP_002345013.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840174|gb|EAQ57432.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85844058|gb|EAQ61268.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni HB93-13] gi|88191517|gb|EAQ95489.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25] gi|112360940|emb|CAL35741.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845793|gb|EDK22884.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486] gi|284926838|gb|ADC29190.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni IA3902] gi|315927606|gb|EFV06937.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929482|gb|EFV08678.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni 305] Length = 281 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT+ Sbjct: 36 GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 96 HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ D Sbjct: 154 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213 Query: 226 DLLDC 230 D++D Sbjct: 214 DIIDV 218 >gi|315162955|gb|EFU06972.1| geranyltranstransferase [Enterococcus faecalis TX0645] Length = 293 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIYAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G ++A+ ++ L Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 LFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|115358000|ref|YP_775138.1| polyprenyl synthetase [Burkholderia ambifaria AMMD] gi|115283288|gb|ABI88804.1| farnesyl-diphosphate synthase [Burkholderia ambifaria AMMD] Length = 294 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 108/200 (54%), Gaps = 5/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RYA+LGG K++R L L AA+E IH YSL+HDD+P MD Sbjct: 31 QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH+QYDE TA++ G+ L + AF ++ L ++ L+ L G Sbjct: 91 DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA-LSPVQQAALVRELALASGS 149 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213 GM GGQ +D+ + T Q+ + +MKTGAL+ A GA+ E L + Sbjct: 150 IGMAGGQAIDLASVGLKLTREQLEKMHRMKTGALLRAAVRMGALAGETPSAETLAALDVY 209 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 210 AAAVGLAFQVVDDILDVTTD 229 >gi|239996638|ref|ZP_04717162.1| geranyltranstransferase [Alteromonas macleodii ATCC 27126] Length = 296 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 14/227 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 Q+ + T++D+L + RL A+R+ALL GGK++R LV + +V Sbjct: 12 QQTDASLLTLIDEL---------PDYAPRLKDAMRHALLAGGKRMRPLLVQVVGNTLDVP 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + AIEC+H YSL+HDDLP+MD+ +RRG PT HI +DE TAI+AG+ L AF Sbjct: 63 KKDQMAISMAIECVHAYSLVHDDLPAMDDDDLRRGMPTCHIAFDEATAILAGDALQALAF 122 Query: 129 EIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185 +++ +P + + RSQL+ L + G GM GGQ +D+ + I ++ + ++KT Sbjct: 123 TVLADAPLSTYAETKRSQLLSVLAKSAGYIGMCGGQAIDLASTGKTISLEELKQLHRLKT 182 Query: 186 GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCE 231 GAL+ E AI++ K L + ++G+ FQ+ DD+LD E Sbjct: 183 GALLKACVEMVAIVSEGLLPQTKIDLMAYAADIGLAFQVQDDILDVE 229 >gi|121613596|ref|YP_001001287.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176] gi|167006181|ref|ZP_02271939.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176] gi|87249601|gb|EAQ72560.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176] Length = 281 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT+ Sbjct: 36 GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 96 HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ D Sbjct: 154 FFEDKKLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213 Query: 226 DLLDC 230 D++D Sbjct: 214 DIIDV 218 >gi|205355656|ref|ZP_03222426.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346433|gb|EDZ33066.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8421] Length = 250 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT+ Sbjct: 5 GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 64 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 65 HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 122 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ D Sbjct: 123 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 182 Query: 226 DLLDC 230 D++D Sbjct: 183 DIIDV 187 >gi|297380126|gb|ADI35013.1| Geranyltranstransferase [Helicobacter pylori v225d] Length = 303 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236 >gi|300859805|ref|ZP_07105893.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11] gi|300850623|gb|EFK78372.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11] gi|315144365|gb|EFT88381.1| geranyltranstransferase [Enterococcus faecalis TX2141] Length = 293 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G ++A+ ++ L Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 LFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|86152300|ref|ZP_01070511.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94] gi|85840789|gb|EAQ58040.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94] Length = 281 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT+ Sbjct: 36 GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 96 HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ D Sbjct: 154 FFEDKKLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213 Query: 226 DLLDC 230 D++D Sbjct: 214 DIIDV 218 >gi|167746999|ref|ZP_02419126.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662] gi|167653959|gb|EDR98088.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662] Length = 297 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 86/235 (36%), Positives = 120/235 (51%), Gaps = 27/235 (11%) Query: 10 QENSKRI---DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65 QE KRI + ILD L + +T +L A+ + GGK++R L+ E +F Sbjct: 6 QELKKRISHIEKILDHYLPKPEGFQKT-----VLKAMNTTVKAGGKRLRPMLMEETYKMF 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 AAIE IH YSLIHDDLP++DN RRG+ T HI Y E AI+AG+ LL Sbjct: 61 GGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLN 120 Query: 126 YAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE 174 YAFE SS PK ++ + L G+ GM+GGQ D++ E + Sbjct: 121 YAFETASSAFALEDADLPKV-------AEAIRILARKPGIYGMIGGQAADVELEGTVLSM 173 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 Q+ I KT AL+ GA++A AS + + + G +G+ FQ+ DD+LD Sbjct: 174 EQIMFIHHNKTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILD 228 >gi|317009586|gb|ADU80166.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Helicobacter pylori India7] Length = 303 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G +++ Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVVSG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQD 236 >gi|256847381|ref|ZP_05552827.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256716045|gb|EEU31020.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 287 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 107/194 (55%), Gaps = 7/194 (3%) Query: 41 SAIRYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 S I + GGK++R L F ++N LR A+E +H YSLIHDDLP+MDN Sbjct: 29 STIYSLMAGGKRLRPALTLAICDAFQQSINQ-DVLRASCAVELLHTYSLIHDDLPAMDND 87 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG PT H ++ A +AG+GLLT AF+ +S L R L+ L G G Sbjct: 88 DLRRGLPTNHRRFGAGMATLAGDGLLTLAFQWLSD--NNLATTTRLSLVRELATAAGPAG 145 Query: 159 MLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 M+ GQ +DI +E + + ++ + KTGAL+ +A +G I+ + + K L FGE Sbjct: 146 MVAGQAMDIHNEGHHLALPDLQLLHEKKTGALIRYAVLAGGIITNQAPETKHLLARFGEY 205 Query: 217 LGIIFQLADDLLDC 230 G+ FQ+ DDL+D Sbjct: 206 YGLAFQIYDDLMDV 219 >gi|39996864|ref|NP_952815.1| geranyltranstransferase [Geobacter sulfurreducens PCA] gi|39983752|gb|AAR35142.1| geranyltranstransferase [Geobacter sulfurreducens PCA] gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens KN400] Length = 297 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 80/198 (40%), Positives = 119/198 (60%), Gaps = 10/198 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY++ GGK++R L+ + AL A+E IH YSLIHDDLP+MD+ Sbjct: 35 AMRYSVFAGGKRVRPILMLAACDAVGGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDF 94 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL---- 156 RRG+PT H + E AI+AG+ LLT AF +ISSP + S +L + H I L Sbjct: 95 RRGRPTNHKVFGEAIAILAGDALLTEAFILISSP--SYAAAVGSDRLLPVIHEIALCAGS 152 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +GM+GGQ++D++ E ID V I KTGAL+ + ++GA++ A+ + + + + Sbjct: 153 RGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIKAGAVLGGANADAVKAVTRY 212 Query: 214 GENLGIIFQLADDLLDCE 231 GE +G+ FQ+ADD+LD E Sbjct: 213 GEAIGLAFQIADDILDIE 230 >gi|317471815|ref|ZP_07931152.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA] gi|316900706|gb|EFV22683.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA] Length = 297 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 86/235 (36%), Positives = 120/235 (51%), Gaps = 27/235 (11%) Query: 10 QENSKRI---DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65 QE KRI + ILD L + +T +L A+ + GGK++R L+ E +F Sbjct: 6 QELKKRISHIEEILDHYLPKPEGFQKT-----VLKAMNTTVKAGGKRLRPMLMEETYKMF 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 AAIE IH YSLIHDDLP++DN RRG+ T HI Y E AI+AG+ LL Sbjct: 61 GGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLN 120 Query: 126 YAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE 174 YAFE SS PK ++ + L G+ GM+GGQ D++ E + Sbjct: 121 YAFETASSAFALEDADLPKV-------AEAIRILARKPGIYGMIGGQAADVELEGTVLSM 173 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 Q+ I KT AL+ GA++A AS + + + G +G+ FQ+ DD+LD Sbjct: 174 EQIMFIHHNKTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILD 228 >gi|260577316|ref|ZP_05845289.1| Polyprenyl synthetase [Rhodobacter sp. SW2] gi|259020497|gb|EEW23820.1| Polyprenyl synthetase [Rhodobacter sp. SW2] Length = 289 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 90/224 (40%), Positives = 126/224 (56%), Gaps = 16/224 (7%) Query: 22 DLLLQTASHMQTQ--------HNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 D+LL A+H+Q + + ++ A+RYA GGK++R FLV E A L + A+ Sbjct: 5 DVLLTDAAHIQARLDAAMAGLSDQPVVQAMRYATQGGKRLRGFLVLESARLHGIAAENAV 64 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 AAIE +H YSL+HDDLP MD+ +RRG PT H+++DE TA++AG+ L T AFE++ Sbjct: 65 SAAAAIEALHAYSLVHDDLPCMDDDDLRRGLPTCHVKWDEATAVLAGDALQTMAFELLCD 124 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALM 189 P + R L+ SL G GM+ GQ LDI E E Q+ +Q KTGAL+ Sbjct: 125 PALG-SEKARLALVASLARASGAAGMVYGQALDIAAETASEPLTLAQITELQAGKTGALI 183 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + S A + + L F LG+ FQ+ADD+LD E D Sbjct: 184 SW---SAQAGALLAGADPAPLARFATALGLAFQIADDILDVEGD 224 >gi|149915300|ref|ZP_01903828.1| lipoyl synthase [Roseobacter sp. AzwK-3b] gi|149811021|gb|EDM70860.1| lipoyl synthase [Roseobacter sp. AzwK-3b] Length = 299 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 88/217 (40%), Positives = 125/217 (57%), Gaps = 17/217 (7%) Query: 26 QTASHMQTQHNDRLLSA---------IRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76 Q A+ +Q H DR+L+A +RYA GGK+IR+ LV + A L ++ AL Sbjct: 18 QQAARVQ-DHLDRVLAAFGDGAVAQAMRYACSGGKRIRARLVLDGARLHDIPEARALWPA 76 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE +H YSL+HDDLP MD+ +RRG+PTVHI+++E TA++ G+ L AFE+ + P Sbjct: 77 CAIEAMHAYSLVHDDLPCMDDDDLRRGQPTVHIRWNEATAVLTGDALQALAFELATHPDG 136 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFA 192 R+ L LSL G QGM+ GQ LDI E D ++ +Q KTGAL+ +A Sbjct: 137 AATAQARADLALSLARAAGGQGMVLGQALDIAAETADRPLTLDEITHLQAGKTGALIEWA 196 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +G MA A + L + LG+ FQ+ DD++D Sbjct: 197 ACAGPRMALA---DTAPLAAYAAALGLAFQIQDDVID 230 >gi|229546828|ref|ZP_04435553.1| geranyltranstransferase [Enterococcus faecalis TX1322] gi|256852634|ref|ZP_05558005.1| geranyltranstransferase [Enterococcus faecalis T8] gi|257077869|ref|ZP_05572230.1| polyprenyl synthetase [Enterococcus faecalis JH1] gi|294780571|ref|ZP_06745934.1| geranyltranstransferase [Enterococcus faecalis PC1.1] gi|307268062|ref|ZP_07549450.1| geranyltranstransferase [Enterococcus faecalis TX4248] gi|307289416|ref|ZP_07569370.1| geranyltranstransferase [Enterococcus faecalis TX0109] gi|307290056|ref|ZP_07569980.1| geranyltranstransferase [Enterococcus faecalis TX0411] gi|229307993|gb|EEN73980.1| geranyltranstransferase [Enterococcus faecalis TX1322] gi|256711979|gb|EEU27016.1| geranyltranstransferase [Enterococcus faecalis T8] gi|256985899|gb|EEU73201.1| polyprenyl synthetase [Enterococcus faecalis JH1] gi|294452398|gb|EFG20837.1| geranyltranstransferase [Enterococcus faecalis PC1.1] gi|306498898|gb|EFM68392.1| geranyltranstransferase [Enterococcus faecalis TX0411] gi|306499671|gb|EFM69034.1| geranyltranstransferase [Enterococcus faecalis TX0109] gi|306515703|gb|EFM84230.1| geranyltranstransferase [Enterococcus faecalis TX4248] gi|315029671|gb|EFT41603.1| geranyltranstransferase [Enterococcus faecalis TX4000] gi|315031732|gb|EFT43664.1| geranyltranstransferase [Enterococcus faecalis TX0017] gi|315147933|gb|EFT91949.1| geranyltranstransferase [Enterococcus faecalis TX4244] gi|315165153|gb|EFU09170.1| geranyltranstransferase [Enterococcus faecalis TX1302] gi|323480221|gb|ADX79660.1| Farnesyl-diphosphate synthase [Enterococcus faecalis 62] gi|327534568|gb|AEA93402.1| geranyltranstransferase [Enterococcus faecalis OG1RF] Length = 293 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G I+A+ ++ L Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGILANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|253687426|ref|YP_003016616.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754004|gb|ACT12080.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 303 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 5/200 (2%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++A+ Y +LLGGK++R FLV LF + + AA+ECIH YSLIHDDLP+MD+ Sbjct: 33 LVNAMEYGSLLGGKRLRPFLVYTTGELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E AI+AG+ L T AF I++ +P Q+ D R ++ L G+ Sbjct: 93 DDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPQVSDRDRLAMISELAQASGV 152 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213 GM GGQ D++ E +D + I + KTGAL+ A GA+ + + L + Sbjct: 153 AGMCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGALASGETGRAALPHLDRY 212 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 213 ANAIGLAFQVQDDILDVVGD 232 >gi|242373821|ref|ZP_04819395.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1] gi|242348375|gb|EES39977.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1] Length = 288 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 123/204 (60%), Gaps = 4/204 (1%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L ++ Y+L GGK+IR L+ ++ ++ ++ A+E IH YSLIHDDLP+ Sbjct: 22 NTDLEESMMYSLQAGGKRIRPVLLLLTLNMLKGDYDKGVQSALALEMIHTYSLIHDDLPA 81 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ RRGK T H Y E AI+AG+ LLT AFE++S+ + ++D ++ +L+ L+ Sbjct: 82 MDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDEL-IEDKVKVKLVQRLSKAS 140 Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+GGQ LD+Q E +D T + I K KTGAL+ FA + +A Q + L Sbjct: 141 GHLGMVGGQTLDMQSENKTVDLTTLEAIHKAKTGALLTFAVMAAVDIAQVDQETSDHLEK 200 Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236 F ++LG++FQ+ DDLLD D K Sbjct: 201 FSQHLGLMFQIKDDLLDVYGDEEK 224 >gi|148545812|ref|YP_001265914.1| polyprenyl synthetase [Pseudomonas putida F1] gi|148509870|gb|ABQ76730.1| farnesyl-diphosphate synthase [Pseudomonas putida F1] Length = 295 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 80/225 (35%), Positives = 128/225 (56%), Gaps = 12/225 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+D L+ L + + +Q RL +A+RY+++ GGK++R L A Sbjct: 12 RVDAALEPLFIAPSKELQ-----RLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQAN 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF + Sbjct: 67 GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLD 126 Query: 134 P--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189 P Q+ D+IR ++ L G GM+GGQ +D+ + +D+ + + + KTGAL+ Sbjct: 127 PCLSPQI-DSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALI 185 Query: 190 CFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ A A Q + + L+ + + +G+ FQ+ DD+LD E D Sbjct: 186 EASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESD 230 >gi|187250684|ref|YP_001875166.1| geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum Pei191] gi|186970844|gb|ACC97829.1| Geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum Pei191] Length = 334 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 79/221 (35%), Positives = 112/221 (50%), Gaps = 40/221 (18%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A F + A+E +H YSLIHDDLPSMDN +RRGKPT H Sbjct: 44 GGKRVRPVLVMAAAEAFGKKAADVMPAACAVEMVHTYSLIHDDLPSMDNDSLRRGKPTNH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSP---KTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 Y E A++AG+ LLTYAFE+ + K+ N L L + +G +GM+GGQ+ Sbjct: 104 KVYGEDLALLAGDALLTYAFEVFAQNGDVKSIGHKNTLKALQL-FANGVGSEGMVGGQVT 162 Query: 166 DIQDEFI------------------------------------DETQVFMIQKMKTGALM 189 DI E + ET + I KTGAL+ Sbjct: 163 DIYAEGLIEGKFKRITAVKKESKALSKKSVKYFLMPAKLKEVSAETVLSYIHANKTGALI 222 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + E+GA++A AS+ ++ +R +G +G+ FQ+ DD+LD Sbjct: 223 RSSIEAGAVLAGASEADRANMRKYGNAMGLAFQIVDDILDV 263 >gi|319937357|ref|ZP_08011764.1| geranyltranstransferase [Coprobacillus sp. 29_1] gi|319807723|gb|EFW04316.1| geranyltranstransferase [Coprobacillus sp. 29_1] Length = 282 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 117/208 (56%), Gaps = 10/208 (4%) Query: 36 NDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N + A+ Y+LL GK++R L + +++ + + AIE IH YSLIHDDLP Sbjct: 21 NGPVKEAMSYSLLAPGKRLRPLLFLSVLRSYQIDYHIYMDIACAIEMIHTYSLIHDDLPG 80 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN +RRG+PT H Q+DE TAI+AG+ LL I + + +++ +L+ L Sbjct: 81 MDNDDLRRGRPTCHKQFDEATAILAGDALLNLGVNTILN--ISIDSDLKVKLLNRLYEAS 138 Query: 155 GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G+ GM+ GQ DI + + + Q+ I K KTG L+ + + G+++A+ S + + Sbjct: 139 GINGMIYGQQQDITFEKQLANLEQLKDIHKHKTGELIAVSMQLGSLIANPS--DYQYWTS 196 Query: 213 FGENLGIIFQLADDLLDC---EEDLPKK 237 G +LG+ FQ+ DD+LD E L KK Sbjct: 197 IGFDLGLAFQIQDDILDVVGNTEQLGKK 224 >gi|294651287|ref|ZP_06728611.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194] gi|292822816|gb|EFF81695.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194] Length = 303 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 122/204 (59%), Gaps = 14/204 (6%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L +A+ +A +LGGK++R L ASL N N R A+E IHCYSL HDDLP Sbjct: 34 EPLKAAVHHAVMLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148 MDN +RRG+PT H+ + E TA++AG+ L + AFEI++S + Q D + Q+ + Sbjct: 94 MDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILASRLFDEQGQGTDAAIVLKQVQI 153 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 T + M+ GQ+LD+Q E +D+T++ I + KTGAL+ A GA+ A + Sbjct: 154 LATAS---SKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVTVFAGTDP 210 Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229 +LR FG+ +G+ FQ+ DD+LD Sbjct: 211 AIPKLRQFGQTIGLAFQVQDDILD 234 >gi|317178721|dbj|BAJ56509.1| geranyltranstransferase [Helicobacter pylori F30] Length = 303 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236 >gi|114705301|ref|ZP_01438209.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506] gi|114540086|gb|EAU43206.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506] Length = 315 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 120/227 (52%), Gaps = 8/227 (3%) Query: 6 PSKLQENS---KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 P++L+E + KRI+ L ++L Q Q D + +++ L GK++R L A Sbjct: 3 PTRLEETTRLQKRIEQRLGEVL-PACLEGQEQLRDAIATSV---LAPGKRLRPLLAVLTA 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 N + A+ G AIE IH SL+ DDLP MD+ +RRG+P H+ Y E TA++A Sbjct: 59 IDLNGDVEAAIEGGCAIELIHTASLVLDDLPCMDDATLRRGQPPTHVAYGEDTALLAVIA 118 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 +++ AFE++++ + L R++ + +L +G G++ GQ D++ Sbjct: 119 MISRAFELLAAAPS-LNPEQRTRSVAALGKAVGTSGLVAGQFADLKGGSGSTDAAARTNA 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KTGAL A E G I + A + + L F LG+ FQL DDLLD Sbjct: 178 LKTGALFLAAVEIGMIGSGAPRETRRELEAFARELGLAFQLLDDLLD 224 >gi|312877544|ref|ZP_07737504.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311795685|gb|EFR12054.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 299 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 135/246 (54%), Gaps = 23/246 (9%) Query: 5 LPSKLQE----NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 + KL+E + K+++ L+ +L + + + Q A+RY++ GGK++R L Sbjct: 2 ISRKLEEYINLSQKKVEEHLEKILAERSPEIIYQ-------AMRYSVFAGGKRLRPLLCL 54 Query: 60 ECASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 + + + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A Sbjct: 55 LSYQMLSKDQEVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIA 114 Query: 117 IIAGNGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173 I+AG+ LL A E+ + K+ +++ L + G++GM+GGQ++DI + D Sbjct: 115 ILAGDALLNLAAEVCMDWILRCGCEKNLVKAAKYLFWSS--GVEGMIGGQVIDITNSGQD 172 Query: 174 ---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 E +F + KT L+ +C GA++A A + + FG+NLG+ FQ+ DD+LD Sbjct: 173 IKSEELLFEMHLKKTSRLIQASCVCGALVAGAENDVVSDMEEFGKNLGLAFQIRDDILDV 232 Query: 231 EEDLPK 236 D K Sbjct: 233 IGDSKK 238 >gi|283957030|ref|ZP_06374502.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336] gi|283791531|gb|EFC30328.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336] Length = 281 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT+ Sbjct: 36 GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 96 HKSYDEPTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ D Sbjct: 154 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEENNQIYKLGLKLGLIFQIND 213 Query: 226 DLLDC 230 D++D Sbjct: 214 DIIDV 218 >gi|21672714|ref|NP_660781.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008653|sp|Q8K9A0|ISPA_BUCAP RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|21623357|gb|AAM67992.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 294 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 80/206 (38%), Positives = 120/206 (58%), Gaps = 11/206 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A++Y+ L GGK++R+ L+ F VN + AA+E +H YSLIHDDLP +DN Sbjct: 32 LFRAMKYSTLSGGKRLRACLIYATGETFQVNIAALDVISAAVELVHSYSLIHDDLPCIDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156 Y RRGK + HI+Y E A++AG+ L AF I+S+ + D+IR +++ ++ IG Sbjct: 92 DYFRRGKISCHIKYGENFALLAGDALQGLAFNILSNSNMPGVHDSIRLKMIAEFSNAIGY 151 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRC- 212 GM GQMLD++ E I+ +++ I KT L+ C S + AS N KE L Sbjct: 152 SGMCIGQMLDLEKERKKINISELEKINLYKTAFLI--RC-SIRLAYFASNNFSKEVLFIL 208 Query: 213 --FGENLGIIFQLADDLLDCEEDLPK 236 F ++G+ FQ+ DD+LD + D+ K Sbjct: 209 DKFSVSIGLAFQIQDDILDLKNDIKK 234 >gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 373 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 107/194 (55%), Gaps = 8/194 (4%) Query: 42 AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GK++R L L A+ A+E IH SLI DDLP MDN + Sbjct: 112 AMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDL 171 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H Y E AI++G LL+ AFE +++ + + + + + L +IG +G++ Sbjct: 172 RRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWA--VRELARSIGTRGLV 229 Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GQ +DI E +D +V + I KT L+ A GAI+ S E E +R F Sbjct: 230 AGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFAR 289 Query: 216 NLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 290 CIGLLFQVVDDILD 303 >gi|120555348|ref|YP_959699.1| polyprenyl synthetase [Marinobacter aquaeolei VT8] gi|120325197|gb|ABM19512.1| farnesyl-diphosphate synthase [Marinobacter aquaeolei VT8] Length = 298 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 83/223 (37%), Positives = 128/223 (57%), Gaps = 11/223 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTAL 73 ++D LD L + A+ ++RL +RY++LGG K++R L A + TAL Sbjct: 18 QVDRELDRCLARNAT------SERLQETMRYSVLGGGKRVRPALCMAAARAMGSDESTAL 71 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT HI +DE +AI+AG+ L T AF ++S Sbjct: 72 APACALELIHAYSLVHDDLPAMDDDDLRRGRPTAHIAFDEASAILAGDALQTLAFALLSD 131 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCF 191 L D R ++ L G QGM+GGQ +D++ + + Q+ + + KTGAL+ Sbjct: 132 APA-LSDRQRVTMISELARASGHQGMVGGQAIDLESVGQQLSVAQLETMHRHKTGALIEA 190 Query: 192 ACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ + ++ + L + LG+ FQ+ DDLLD E D Sbjct: 191 SVRLGALTSETVTECQLSNLTDYASALGLAFQVQDDLLDIEGD 233 >gi|332141878|ref|YP_004427616.1| geranyltranstransferase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551900|gb|AEA98618.1| geranyltranstransferase [Alteromonas macleodii str. 'Deep ecotype'] Length = 296 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 83/226 (36%), Positives = 128/226 (56%), Gaps = 14/226 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 Q+ + T++D+L + RL A+R+ALL GGK++R LV + +V Sbjct: 12 QQTDASLLTLIDEL---------PDYAPRLKDAMRHALLAGGKRMRPLLVQVVGNTLDVP 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + AIEC+H YSL+HDDLP+MD+ +RRG PT HI +DE TAI+AG+ L AF Sbjct: 63 KTDQMAISMAIECVHAYSLVHDDLPAMDDDDLRRGMPTCHIAFDEATAILAGDALQALAF 122 Query: 129 EIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185 +++ +P + + R QL+ L + G GM GGQ +D+ E I ++ + K+KT Sbjct: 123 TVLADAPLSTYAEAKRPQLLSVLAKSAGYVGMCGGQAIDLASTGESISLDELKRLHKLKT 182 Query: 186 GALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDC 230 GAL+ E AI++ E K L + ++G+ FQ+ DD+LD Sbjct: 183 GALLRACVEMVAIVSEDLLPEAKVDLMAYAADIGLAFQVQDDILDV 228 >gi|256962594|ref|ZP_05566765.1| polyprenyl synthetase [Enterococcus faecalis HIP11704] gi|257086340|ref|ZP_05580701.1| polyprenyl synthetase [Enterococcus faecalis D6] gi|307271992|ref|ZP_07553259.1| geranyltranstransferase [Enterococcus faecalis TX0855] gi|256953090|gb|EEU69722.1| polyprenyl synthetase [Enterococcus faecalis HIP11704] gi|256994370|gb|EEU81672.1| polyprenyl synthetase [Enterococcus faecalis D6] gi|306511339|gb|EFM80342.1| geranyltranstransferase [Enterococcus faecalis TX0855] gi|315026958|gb|EFT38890.1| geranyltranstransferase [Enterococcus faecalis TX2137] Length = 293 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQKLAKA 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G ++A+ ++ L Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|77461227|ref|YP_350734.1| farnesyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1] gi|77385230|gb|ABA76743.1| geranyltranstransferase [Pseudomonas fluorescens Pf0-1] Length = 295 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 121/201 (60%), Gaps = 5/201 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RY+++ GGK++R L A A+E IH YSL+HDDLP+MD Sbjct: 30 RLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQANGAACAVELIHAYSLVHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIG 155 + +RRG+PT H ++DE AI+AG+GL + AF + P+ + L +IR Q + +L H G Sbjct: 90 DDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSALLDPRLSDLSADIRLQQVTALAHAAG 149 Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRC 212 GM+GGQ +D+ +D+ + + + KTGAL+ + + GA+ + A ++E + L+ Sbjct: 150 PAGMVGGQAIDLGSVGLKLDQKALEQMHRHKTGALIEVSVKLGALASGCAEKDELKSLQT 209 Query: 213 FGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD E D Sbjct: 210 YAQAIGLAFQVQDDILDVESD 230 >gi|330821215|ref|YP_004350077.1| Polyprenyl synthetase [Burkholderia gladioli BSR3] gi|327373210|gb|AEA64565.1| Polyprenyl synthetase [Burkholderia gladioli BSR3] Length = 294 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 109/200 (54%), Gaps = 5/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RYA++GG K++R L L AA+E IH YSL+HDD+P MD Sbjct: 31 KLHEAMRYAVMGGGKRVRPLLCHAAGELTGATEAARNAASAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVHIQYDE TA++ G+ L + AF + + L ++ L+ L G Sbjct: 91 DDALRRGKPTVHIQYDEPTALLVGDALQSQAF-VALTDAAALTAVQQAALVRELALASGS 149 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRCF 213 GM GGQ +D+ + Q+ + + KTGAL+ A GA+ ++ R L + Sbjct: 150 VGMAGGQAIDLASVGLMLTREQLETMHRKKTGALLRAAVRMGALAGETPSDDTMRALDVY 209 Query: 214 GENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD D Sbjct: 210 ADAIGLAFQVVDDILDVTTD 229 >gi|329574366|gb|EGG55938.1| geranyltranstransferase [Enterococcus faecalis TX1467] Length = 286 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G I+A+ ++ L Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGILANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|237750142|ref|ZP_04580622.1| geranyltranstransferase [Helicobacter bilis ATCC 43879] gi|229374329|gb|EEO24720.1| geranyltranstransferase [Helicobacter bilis ATCC 43879] Length = 293 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/190 (38%), Positives = 114/190 (60%), Gaps = 9/190 (4%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R + L++ + A V +IEC+H YSLIHDDLP+MDN +RR PT+ Sbjct: 40 GGKRFRPNLLLSVVCAEAKEQAKNAFDVCLSIECLHTYSLIHDDLPAMDNAALRRNHPTL 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +YDEV+AI+ G+GL TY+F ++++ ++ ++L+ L N G+ GM+ GQ LD Sbjct: 100 HCKYDEVSAILIGDGLNTYSFYLLAN--AHFAPSVVAELISCLAENGGIGGMVLGQALDC 157 Query: 168 QDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 E +D+ Q I KT L+ + + GAI+A+ S + ++ L FG LG+ FQ+ Sbjct: 158 YFEHTTLPLDKLQ--FIHTHKTAKLIAASLKMGAIIANLSLDMQKFLYDFGLVLGLYFQI 215 Query: 224 ADDLLDCEED 233 DD++D +D Sbjct: 216 RDDIIDSIQD 225 >gi|15224064|ref|NP_179960.1| GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2); farnesyltranstransferase [Arabidopsis thaliana] gi|75218930|sp|O04046|GGPP2_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 2; Short=GGPP synthase 2; Short=GGPS2; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2; AltName: Full=Dimethylallyltranstransferase 2; AltName: Full=Farnesyl diphosphate synthase 2; AltName: Full=Farnesyltranstransferase 2; AltName: Full=Geranyltranstransferase 2; Flags: Precursor gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana] gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana] gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana] Length = 376 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 107/194 (55%), Gaps = 8/194 (4%) Query: 42 AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GK++R L L A+ A+E IH SLI DDLP MDN + Sbjct: 115 AMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDL 174 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H Y E AI++G LL+ AFE +++ + + + + + L +IG +G++ Sbjct: 175 RRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWA--VRELARSIGTRGLV 232 Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GQ +DI E +D +V + I KT L+ A GAI+ S E E +R F Sbjct: 233 AGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFAR 292 Query: 216 NLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 293 CIGLLFQVVDDILD 306 >gi|315149503|gb|EFT93519.1| geranyltranstransferase [Enterococcus faecalis TX0012] Length = 293 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G ++A+ ++ L Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|50085991|ref|YP_047501.1| geranyltranstransferase [Acinetobacter sp. ADP1] gi|49531967|emb|CAG69679.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter sp. ADP1] Length = 302 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 7/198 (3%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L SA+ + +LGGK++R L AS+ N N+ A R A+E IHCYSL HDDLP MD Sbjct: 36 LKSAVYHTVMLGGKRVRPALCYAVASMEKNPNYAAARRAAVAVELIHCYSLAHDDLPCMD 95 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PT H+ + E TA++AG+ L + AFE++ S ++++ + ++L + Sbjct: 96 NDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDQQNSVDASIVLRQMQILAT 155 Query: 157 QG--MLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLR 211 M+ GQ+LD+Q E ID+ Q+ I + KTGAL+ A GA+ + ++ LR Sbjct: 156 ASSKMVCGQVLDLQAEGKEIDQEQLENIHRNKTGALIQAALMMGAVTLFSGMDQAIPHLR 215 Query: 212 CFGENLGIIFQLADDLLD 229 FG+ +G+ FQ+ DD+LD Sbjct: 216 QFGQRIGLAFQVQDDILD 233 >gi|53716444|ref|YP_105136.1| geranyltranstransferase [Burkholderia mallei ATCC 23344] gi|67643212|ref|ZP_00441960.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4] gi|121597567|ref|YP_991106.1| geranyltranstransferase [Burkholderia mallei SAVP1] gi|124382622|ref|YP_001025504.1| geranyltranstransferase [Burkholderia mallei NCTC 10229] gi|126446017|ref|YP_001077567.1| geranyltranstransferase [Burkholderia mallei NCTC 10247] gi|167000281|ref|ZP_02266100.1| geranyltranstransferase [Burkholderia mallei PRL-20] gi|254177164|ref|ZP_04883820.1| geranyltranstransferase [Burkholderia mallei ATCC 10399] gi|254203074|ref|ZP_04909436.1| geranyltranstransferase [Burkholderia mallei FMH] gi|254208407|ref|ZP_04914756.1| geranyltranstransferase [Burkholderia mallei JHU] gi|254359405|ref|ZP_04975677.1| geranyltranstransferase [Burkholderia mallei 2002721280] gi|52422414|gb|AAU45984.1| geranyltranstransferase [Burkholderia mallei ATCC 23344] gi|121225365|gb|ABM48896.1| geranyltranstransferase [Burkholderia mallei SAVP1] gi|126238871|gb|ABO01983.1| geranyltranstransferase [Burkholderia mallei NCTC 10247] gi|147746119|gb|EDK53197.1| geranyltranstransferase [Burkholderia mallei FMH] gi|147751094|gb|EDK58162.1| geranyltranstransferase [Burkholderia mallei JHU] gi|148028592|gb|EDK86552.1| geranyltranstransferase [Burkholderia mallei 2002721280] gi|160698204|gb|EDP88174.1| geranyltranstransferase [Burkholderia mallei ATCC 10399] gi|238524497|gb|EEP87930.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4] gi|243063768|gb|EES45954.1| geranyltranstransferase [Burkholderia mallei PRL-20] gi|261826895|gb|ABN00184.2| geranyltranstransferase [Burkholderia mallei NCTC 10229] Length = 294 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 111/200 (55%), Gaps = 5/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RYA+LGG K++R L L + AA+E IH YSL+HDD+P MD Sbjct: 31 QLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH++YDE TA++ G+ L + AF ++ L + ++ L+ L G Sbjct: 91 DDALRRGKPTVHVKYDEPTALLVGDALQSQAFVALTD-AAALPADRQAALVRELALASGS 149 Query: 157 QGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKER-LRCF 213 GM GGQ +D+ + T+ + + +MKTGAL+ + GA+ + R L + Sbjct: 150 IGMAGGQAIDLASVGVALTRDALEKMHRMKTGALLRASVRMGALAGETPSGDAMRALDAY 209 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 210 AAAVGLAFQVVDDILDVTTD 229 >gi|78223142|ref|YP_384889.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15] gi|78194397|gb|ABB32164.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15] Length = 297 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 84/199 (42%), Positives = 121/199 (60%), Gaps = 12/199 (6%) Query: 42 AIRYALL-GGKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 A+RY++ GGK+IR L + C ++ L AL A+E IH YSLIHDDLP+MD+ Sbjct: 35 AMRYSVFAGGKRIRPVLMLAACEAVGGTPDL-ALPAACAMEMIHTYSLIHDDLPAMDDDD 93 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL--- 156 RRG+PT H + E AI+AG+ LLT AF ++SSP+ K +L + H IG+ Sbjct: 94 FRRGRPTNHKVFGEAIAILAGDALLTEAFILMSSPEYAAKAG--HARILPVIHEIGICAG 151 Query: 157 -QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 +GM+GGQ++D++ E ID V I KTGALM + ++GAI+ A + + Sbjct: 152 SRGMVGGQVVDMESEGKKDIDLATVQYIHTHKTGALMKASVKAGAILGGAEGDALAAMTR 211 Query: 213 FGENLGIIFQLADDLLDCE 231 +GE +G+ FQ+ADD+LD E Sbjct: 212 YGEAIGLAFQIADDILDIE 230 >gi|53722784|ref|YP_111769.1| geranyltranstransferase [Burkholderia pseudomallei K96243] gi|76817464|ref|YP_336001.1| geranyltranstransferase [Burkholderia pseudomallei 1710b] gi|126442384|ref|YP_001063528.1| geranyltranstransferase [Burkholderia pseudomallei 668] gi|126458477|ref|YP_001076425.1| geranyltranstransferase [Burkholderia pseudomallei 1106a] gi|134278219|ref|ZP_01764933.1| geranyltranstransferase [Burkholderia pseudomallei 305] gi|167724592|ref|ZP_02407828.1| geranyltranstransferase [Burkholderia pseudomallei DM98] gi|167743543|ref|ZP_02416317.1| geranyltranstransferase [Burkholderia pseudomallei 14] gi|167820731|ref|ZP_02452411.1| geranyltranstransferase [Burkholderia pseudomallei 91] gi|167829090|ref|ZP_02460561.1| geranyltranstransferase [Burkholderia pseudomallei 9] gi|167850567|ref|ZP_02476075.1| geranyltranstransferase [Burkholderia pseudomallei B7210] gi|167899160|ref|ZP_02486561.1| geranyltranstransferase [Burkholderia pseudomallei 7894] gi|167907503|ref|ZP_02494708.1| geranyltranstransferase [Burkholderia pseudomallei NCTC 13177] gi|167915842|ref|ZP_02502933.1| geranyltranstransferase [Burkholderia pseudomallei 112] gi|167923681|ref|ZP_02510772.1| geranyltranstransferase [Burkholderia pseudomallei BCC215] gi|217422667|ref|ZP_03454170.1| geranyltranstransferase [Burkholderia pseudomallei 576] gi|226195863|ref|ZP_03791450.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9] gi|237509552|ref|ZP_04522267.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346] gi|242312765|ref|ZP_04811782.1| geranyltranstransferase [Burkholderia pseudomallei 1106b] gi|254184923|ref|ZP_04891512.1| geranyltranstransferase [Burkholderia pseudomallei 1655] gi|254186152|ref|ZP_04892670.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237] gi|254194119|ref|ZP_04900551.1| geranyltranstransferase [Burkholderia pseudomallei S13] gi|254263700|ref|ZP_04954565.1| geranyltranstransferase [Burkholderia pseudomallei 1710a] gi|254301205|ref|ZP_04968649.1| geranyltranstransferase [Burkholderia pseudomallei 406e] gi|52213198|emb|CAH39238.1| geranyltranstransferase [Burkholderia pseudomallei K96243] gi|76581937|gb|ABA51411.1| geranyltranstransferase [Burkholderia pseudomallei 1710b] gi|126221875|gb|ABN85380.1| geranyltranstransferase [Burkholderia pseudomallei 668] gi|126232245|gb|ABN95658.1| geranyltranstransferase [Burkholderia pseudomallei 1106a] gi|134250003|gb|EBA50083.1| geranyltranstransferase [Burkholderia pseudomallei 305] gi|157811223|gb|EDO88393.1| geranyltranstransferase [Burkholderia pseudomallei 406e] gi|157933838|gb|EDO89508.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237] gi|169650870|gb|EDS83563.1| geranyltranstransferase [Burkholderia pseudomallei S13] gi|184215515|gb|EDU12496.1| geranyltranstransferase [Burkholderia pseudomallei 1655] gi|217394898|gb|EEC34917.1| geranyltranstransferase [Burkholderia pseudomallei 576] gi|225932348|gb|EEH28348.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9] gi|235001757|gb|EEP51181.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346] gi|242136004|gb|EES22407.1| geranyltranstransferase [Burkholderia pseudomallei 1106b] gi|254214702|gb|EET04087.1| geranyltranstransferase [Burkholderia pseudomallei 1710a] Length = 294 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 111/200 (55%), Gaps = 5/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RYA+LGG K++R L L + AA+E IH YSL+HDD+P MD Sbjct: 31 QLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH++YDE TA++ G+ L + AF ++ L + ++ L+ L G Sbjct: 91 DDALRRGKPTVHVKYDEPTALLVGDALQSQAFVALTD-AAALPADRQAALVRELALASGS 149 Query: 157 QGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRCF 213 GM GGQ +D+ + T+ + + +MKTGAL+ + GA+ + R L + Sbjct: 150 IGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRMGALAGETPSGDAMRALDAY 209 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 210 AAAVGLAFQVVDDILDVTTD 229 >gi|313669268|ref|YP_004049552.1| geranyltranstransferase [Neisseria lactamica ST-640] gi|313006730|emb|CBN88200.1| geranyltranstransferase [Neisseria lactamica 020-06] Length = 298 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 77/196 (39%), Positives = 115/196 (58%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV + L + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAVLDGGKRLRPMLVLAASELGESVADAVGQAMAAIEMIHAYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H++Y E TA++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHVKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + + + +KTGAL+ A GA+ + +N L + L Sbjct: 158 GGQTIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLGAMSCPNLPENSLAVLDDYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|325518120|gb|EGC97906.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49] Length = 294 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 109/200 (54%), Gaps = 5/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RYA+LGG K++R L L AA+E IH YSL+HDD+P MD Sbjct: 31 QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH+QYDE TA++ G+ L + AF ++ L ++ L+ L G Sbjct: 91 DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTD-AAALSPVQQAALVRELALASGS 149 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213 GM GGQ +D+ + T Q+ + +MKTGAL+ A GA+ S + L + Sbjct: 150 IGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGDTPSADAMAALDVY 209 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 210 AGAVGLAFQVVDDILDVTTD 229 >gi|261402402|ref|YP_003246626.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7] gi|261369395|gb|ACX72144.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7] Length = 317 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 79/198 (39%), Positives = 119/198 (60%), Gaps = 12/198 (6%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 ND L +A ++ L GGK++R +L +L N L AA+E IH Y+LIHDD+ Sbjct: 22 NDELYNASKHLLFAGGKRLRPYLTVITYNLKKDNMEEILPAAAAVELIHNYTLIHDDI-- 79 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGKPTVH+ Y E AI+AG+ L AFE +S+ +KD+ ++ +L + Sbjct: 80 MDNDDERRGKPTVHVVYGEPIAILAGDLLYAKAFEAVSN----IKDSKKAHDVLKILSKA 135 Query: 155 GLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 ++ + GQ +D++ E + E + MI+K KTGAL+ + E GAIMA S+ EK L+ Sbjct: 136 CVE-VCEGQAMDMKFENYNPTMEEYLEMIRK-KTGALLEASVEIGAIMADCSEEEKTALK 193 Query: 212 CFGENLGIIFQLADDLLD 229 + + +G+ FQ+ DD+LD Sbjct: 194 EYAKRIGLTFQIQDDVLD 211 >gi|212709179|ref|ZP_03317307.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM 30120] gi|212688091|gb|EEB47619.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM 30120] Length = 305 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 80/197 (40%), Positives = 115/197 (58%), Gaps = 5/197 (2%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A++Y LLGGK++R FL + V+ AA+ECIH YSLIHDDLP+MD+ Sbjct: 38 LAQAMKYGTLLGGKRLRPFLTYAVGEMLGVSLDNLDAPAAAVECIHAYSLIHDDLPAMDD 97 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E A++AG+ L T+AF+++SS + D R ++ L + GL Sbjct: 98 DDLRRGQPTCHIKFGEGNAVLAGDALQTFAFQLLSSASMPDVSDKDRIAMIAELAYASGL 157 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213 GM GGQ LD+ E +D + I + KTGAL+ A GA A H L + Sbjct: 158 AGMCGGQALDLDAEGKRVDLVSLERIHQHKTGALIRAAIRLGAYAAGHKGYQALTNLDKY 217 Query: 214 GENLGIIFQLADDLLDC 230 E++G+ FQ+ DD+LD Sbjct: 218 AESIGLAFQVQDDILDV 234 >gi|317014338|gb|ADU81774.1| geranyltranstransferase [Helicobacter pylori Gambia94/24] Length = 303 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 115/194 (59%), Gaps = 11/194 (5%) Query: 49 GGKKIRS--FLVTECASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK+ R FL CA + ++L ++ +IEC+H YSLIHDDLP MDN +RR Sbjct: 45 GGKRFRPKLFLAVLCALVGKKDYLNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRR 104 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 PT+H +YDE TA++ G+ L TY+FE++S+ L+ I +L+ L+ N G++GM+ G Sbjct: 105 NHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESRIIVELVKILSANGGIKGMILG 162 Query: 163 QMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGI 219 Q LD ++ ++ Q+ + + KT L+ + G + + + E + L+ FG +G+ Sbjct: 163 QALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASGINDEELLKWLQAFGLKMGL 222 Query: 220 IFQLADDLLDCEED 233 FQ+ DD++D +D Sbjct: 223 CFQVLDDIIDVTQD 236 >gi|317011137|gb|ADU84884.1| geranyltranstransferase [Helicobacter pylori SouthAfrica7] Length = 303 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 123/216 (56%), Gaps = 17/216 (7%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASLFNVNHLTA----LRVGAAIECIH 83 H+++ H + L GGK+ R FL CA ++L ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALAGKKDYLNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + Sbjct: 144 VELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLV--- 200 Query: 202 ASQNEKER----LRCFGENLGIIFQLADDLLDCEED 233 AS N+ E L+ FG +G+ FQ+ DD++D +D Sbjct: 201 ASGNKDEELFRWLQDFGLKMGLCFQVLDDIIDVTQD 236 >gi|134292965|ref|YP_001116701.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4] gi|134136122|gb|ABO57236.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4] Length = 294 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 109/200 (54%), Gaps = 5/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RYA+LGG K++R L L AA+E IH YSL+HDD+P MD Sbjct: 31 QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH+QYDE TA++ G+ L + AF ++ L ++ L+ L G Sbjct: 91 DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA-LSPVQQAALVRELALASGS 149 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213 GM GGQ +D+ + T Q+ + +MKTGAL+ A GA+ S + L + Sbjct: 150 IGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADAMAALDVY 209 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 210 AGAVGLAFQVVDDILDVTTD 229 >gi|257081234|ref|ZP_05575595.1| polyprenyl synthetase [Enterococcus faecalis E1Sol] gi|256989264|gb|EEU76566.1| polyprenyl synthetase [Enterococcus faecalis E1Sol] Length = 293 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G ++A+ ++ L Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|170699439|ref|ZP_02890483.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10] gi|170135639|gb|EDT03923.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10] Length = 294 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 109/205 (53%), Gaps = 15/205 (7%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RYA+LGG K++R L L AA+E IH YSL+HDD+P MD Sbjct: 31 QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151 + +RRGKPTVH+QYDE TA++ G+ L + AF ++ SP Q + L+ L Sbjct: 91 DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDVDALSPVQQ------AALVRELA 144 Query: 152 HNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-E 208 G GM GGQ +D+ + T Q+ + +MKTGAL+ A GA+ E Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGDTPSAETLA 204 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 205 ALDVYAAAVGLAFQVVDDILDVTTD 229 >gi|156935030|ref|YP_001438946.1| geranyltranstransferase [Cronobacter sakazakii ATCC BAA-894] gi|156533284|gb|ABU78110.1| hypothetical protein ESA_02881 [Cronobacter sakazakii ATCC BAA-894] Length = 299 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 120/204 (58%), Gaps = 13/204 (6%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+ Y LLGGK++R FLV +F VN AAIECIH YSL+HDDLP+MD+ Sbjct: 32 LVEAMLYGTLLGGKRLRPFLVYATGEMFGVNPTALDAPAAAIECIHAYSLMHDDLPAMDD 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E +AI+AG+ L T AF I+S +P + R ++ L G+ Sbjct: 92 DDLRRGQPTCHIRFGEASAILAGDALQTLAFSILSDAPMENVALRDRLAMVSELAKASGV 151 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209 GM GGQ LD++ E +D + I + KTGAL+ A GA+ A +K R Sbjct: 152 AGMCGGQALDLEAEGQQVDLDALERIHRHKTGALIRAAVRMGALCA----GDKGRDALVY 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + +++G+ FQ+ DD+LD D Sbjct: 208 LDSYADSIGLAFQVQDDILDVVGD 231 >gi|257083890|ref|ZP_05578251.1| geranyltranstransferase [Enterococcus faecalis Fly1] gi|256991920|gb|EEU79222.1| geranyltranstransferase [Enterococcus faecalis Fly1] Length = 293 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G ++A+ ++ L Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|315173304|gb|EFU17321.1| geranyltranstransferase [Enterococcus faecalis TX1346] Length = 293 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G ++A+ ++ L Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|294782565|ref|ZP_06747891.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA] gi|294481206|gb|EFG28981.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA] Length = 298 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 7/209 (3%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + + + + YALL GGK++R FL+ L N + ++ +E IH YSL+HDDLP Sbjct: 29 YPETIAKGMEYALLNGGKRLRPFLLFTTLELLNQDIQKGVKSAIGVEMIHSYSLVHDDLP 88 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 ++DN RRGK T H + E AI+ G+ LLTYAF ++S + + ++S T Sbjct: 89 ALDNDDYRRGKLTTHKVFGEAEAILIGDALLTYAFYMLSEKNLNILSFEQITNIISKTSA 148 Query: 154 I-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G+ GM+GGQM+DI+ E I+ + I K KTG L+ E I+A S++++ L Sbjct: 149 YSGINGMIGGQMIDIESENKKINLETLKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVL 208 Query: 211 RCFGENLGIIFQLADDLLDCE---EDLPK 236 + E +G+ FQ+ DD+LD E EDL K Sbjct: 209 EEYAELIGLAFQVKDDILDIEGTFEDLGK 237 >gi|251790664|ref|YP_003005385.1| geranyltranstransferase [Dickeya zeae Ech1591] gi|247539285|gb|ACT07906.1| Polyprenyl synthetase [Dickeya zeae Ech1591] Length = 303 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 85/230 (36%), Positives = 129/230 (56%), Gaps = 16/230 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 +L + +RID L + S + Q + + + ALLGGK++R FLV LF + Sbjct: 7 QLAAHHQRIDAALSHFI----SALPFQSSPLVAAMAHGALLGGKRLRPFLVYSTGRLFAI 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AA+ECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ L T A Sbjct: 63 AQDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILAGDALQTLA 122 Query: 128 FEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 F I++ +P + D R ++ L G+ GM GGQ LD++ E +D + I + K Sbjct: 123 FSILADAPMPGVSDRDRLAMISELARASGVAGMCGGQALDLEAEGLQVDLQTLERIHRHK 182 Query: 185 TGALMCFACESGAIMAHASQNEKERLRC-----FGENLGIIFQLADDLLD 229 TGAL+ + GA+ A E+ RL + + +G+ FQ+ DD+LD Sbjct: 183 TGALIRASVRLGALAA----GERGRLALPCLDRYADAIGLAFQVQDDILD 228 >gi|227517904|ref|ZP_03947953.1| geranyltranstransferase [Enterococcus faecalis TX0104] gi|229548922|ref|ZP_04437647.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200] gi|255971435|ref|ZP_05422021.1| polyprenyl synthetase [Enterococcus faecalis T1] gi|255974048|ref|ZP_05424634.1| polyprenyl synthetase [Enterococcus faecalis T2] gi|256617904|ref|ZP_05474750.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200] gi|256761737|ref|ZP_05502317.1| polyprenyl synthetase [Enterococcus faecalis T3] gi|256960163|ref|ZP_05564334.1| polyprenyl synthetase [Enterococcus faecalis Merz96] gi|257089390|ref|ZP_05583751.1| polyprenyl synthetase [Enterococcus faecalis CH188] gi|257415599|ref|ZP_05592593.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG] gi|257421230|ref|ZP_05598220.1| geranyltranstransferase [Enterococcus faecalis X98] gi|293382531|ref|ZP_06628465.1| geranyltranstransferase [Enterococcus faecalis R712] gi|293387869|ref|ZP_06632408.1| geranyltranstransferase [Enterococcus faecalis S613] gi|307275463|ref|ZP_07556605.1| geranyltranstransferase [Enterococcus faecalis TX2134] gi|307278969|ref|ZP_07560028.1| geranyltranstransferase [Enterococcus faecalis TX0860] gi|312900452|ref|ZP_07759759.1| geranyltranstransferase [Enterococcus faecalis TX0470] gi|312904544|ref|ZP_07763702.1| geranyltranstransferase [Enterococcus faecalis TX0635] gi|312906866|ref|ZP_07765863.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512] gi|312952746|ref|ZP_07771608.1| geranyltranstransferase [Enterococcus faecalis TX0102] gi|312978879|ref|ZP_07790605.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516] gi|227074658|gb|EEI12621.1| geranyltranstransferase [Enterococcus faecalis TX0104] gi|229305943|gb|EEN71939.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200] gi|255962453|gb|EET94929.1| polyprenyl synthetase [Enterococcus faecalis T1] gi|255966920|gb|EET97542.1| polyprenyl synthetase [Enterococcus faecalis T2] gi|256597431|gb|EEU16607.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200] gi|256682988|gb|EEU22683.1| polyprenyl synthetase [Enterococcus faecalis T3] gi|256950659|gb|EEU67291.1| polyprenyl synthetase [Enterococcus faecalis Merz96] gi|256998202|gb|EEU84722.1| polyprenyl synthetase [Enterococcus faecalis CH188] gi|257157427|gb|EEU87387.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG] gi|257163054|gb|EEU93014.1| geranyltranstransferase [Enterococcus faecalis X98] gi|291080079|gb|EFE17443.1| geranyltranstransferase [Enterococcus faecalis R712] gi|291082716|gb|EFE19679.1| geranyltranstransferase [Enterococcus faecalis S613] gi|295113841|emb|CBL32478.1| farnesyl-diphosphate synthase [Enterococcus sp. 7L76] gi|306504356|gb|EFM73567.1| geranyltranstransferase [Enterococcus faecalis TX0860] gi|306507851|gb|EFM76979.1| geranyltranstransferase [Enterococcus faecalis TX2134] gi|310627120|gb|EFQ10403.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512] gi|310629262|gb|EFQ12545.1| geranyltranstransferase [Enterococcus faecalis TX0102] gi|310632057|gb|EFQ15340.1| geranyltranstransferase [Enterococcus faecalis TX0635] gi|311288316|gb|EFQ66872.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516] gi|311292428|gb|EFQ70984.1| geranyltranstransferase [Enterococcus faecalis TX0470] gi|315153058|gb|EFT97074.1| geranyltranstransferase [Enterococcus faecalis TX0031] gi|315156830|gb|EFU00847.1| geranyltranstransferase [Enterococcus faecalis TX0043] gi|315157617|gb|EFU01634.1| geranyltranstransferase [Enterococcus faecalis TX0312] gi|315171919|gb|EFU15936.1| geranyltranstransferase [Enterococcus faecalis TX1342] gi|315577402|gb|EFU89593.1| geranyltranstransferase [Enterococcus faecalis TX0630] Length = 293 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G ++A+ ++ L Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|332673768|gb|AEE70585.1| geranyltranstransferase [Helicobacter pylori 83] Length = 303 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALGIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ +I Sbjct: 86 TYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236 >gi|254451013|ref|ZP_05064450.1| farnesyl diphosphate synthase [Octadecabacter antarcticus 238] gi|198265419|gb|EDY89689.1| farnesyl diphosphate synthase [Octadecabacter antarcticus 238] Length = 301 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 84/200 (42%), Positives = 116/200 (58%), Gaps = 17/200 (8%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+ YA+ GGK +R FLV E A L V A + AIE +H YSLIHDDLP MD+ +R Sbjct: 46 AMMYAVRGGKSLRGFLVLEGARLHGVQERIAAPIAGAIEAMHAYSLIHDDLPCMDDDDLR 105 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQ 157 RGKPTVH ++DE TA++ G+ L AFE+I +P+T++ L L + G + Sbjct: 106 RGKPTVHRKWDEATAVLTGDALQALAFELIMLADITPETKV------VLAHMLAVDAGER 159 Query: 158 GMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+GGQ DI E ++ +Q KTGAL+ +AC +G +A A + +R + Sbjct: 160 GMVGGQAADIAAESAAAALTLGEIESLQAKKTGALVEWACAAGPRIAGADEMP---MRQY 216 Query: 214 GENLGIIFQLADDLLDCEED 233 G LG FQ+ADD+LD D Sbjct: 217 GRALGRAFQIADDILDVTGD 236 >gi|283769470|ref|ZP_06342366.1| putative geranyltranstransferase [Bulleidia extructa W1219] gi|283103738|gb|EFC05124.1| putative geranyltranstransferase [Bulleidia extructa W1219] Length = 276 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 75/199 (37%), Positives = 118/199 (59%), Gaps = 11/199 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ YAL+ GK+IR ++ F + A+E IH YSLIHDDLP+MD+ Sbjct: 18 LKKAMEYALMTKGKRIRPQIIFHTLKAFGLQEELGYAYACALEYIHTYSLIHDDLPAMDD 77 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPTVH+ + E AI+AG+ LLT +F ++ K N+++ +LS + G Sbjct: 78 DVLRRGKPTVHVSFGEDLAILAGDALLTESFYQLTKNTLSDKQNLKALEVLS--SHAGAN 135 Query: 158 GMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF--- 213 GM+ GQ++D++ ++F + + + + KTG L+ + E GAI A N+ E+L F Sbjct: 136 GMVLGQVMDMRTNQFSTQEDIETMLEKKTGRLLESSFELGAIAA----NQLEQLMSFQEA 191 Query: 214 GENLGIIFQLADDLLDCEE 232 G+ +G+ FQ+ DDLL+ E+ Sbjct: 192 GKWIGLAFQIQDDLLEVEK 210 >gi|215485502|ref|YP_002327933.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69] gi|312964557|ref|ZP_07778813.1| geranyltranstransferase [Escherichia coli 2362-75] gi|215263574|emb|CAS07904.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69] gi|312290791|gb|EFR18668.1| geranyltranstransferase [Escherichia coli 2362-75] gi|315299587|gb|EFU58835.1| polyprenyl synthetase [Escherichia coli MS 16-3] gi|323191339|gb|EFZ76602.1| geranyltranstransferase [Escherichia coli RN587/1] Length = 299 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 118/204 (57%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRNALPV 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231 >gi|282850211|ref|ZP_06259590.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745] gi|282579704|gb|EFB85108.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745] Length = 292 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 112/199 (56%), Gaps = 4/199 (2%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q ++L ++ Y+L+ GGK+IR L + + A+ECIH YSL+HDDL Sbjct: 26 QEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDL 85 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN RRG T H Y E AI+AG+GLLTYAF++++S T + + + Sbjct: 86 PAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTS-NTVASAQQKLDAIQCVAT 144 Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G +GM+GGQ D+ +D+ I ++ ++ KTGAL + E G I+ A+ + L Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHSGKTGALFNASVELGLILGCANNTTRTAL 204 Query: 211 RCFGENLGIIFQLADDLLD 229 + LG++FQ+ DD+LD Sbjct: 205 MEYSNCLGLLFQITDDILD 223 >gi|317455530|pdb|3Q1O|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter Pylori Complexed With Magnesium And Isoprenyl Diphosphate gi|317455531|pdb|3Q1O|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter Pylori Complexed With Magnesium And Isoprenyl Diphosphate gi|317455532|pdb|3Q1O|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter Pylori Complexed With Magnesium And Isoprenyl Diphosphate gi|317455533|pdb|3Q1O|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter Pylori Complexed With Magnesium And Isoprenyl Diphosphate Length = 310 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 35 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 94 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ L+ +I Sbjct: 95 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 152 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 153 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASG 212 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 213 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 245 >gi|313894537|ref|ZP_07828101.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412] gi|313440933|gb|EFR59361.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412] Length = 292 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 110/195 (56%), Gaps = 4/195 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L ++ Y+L+ GGK+IR L + + A+ECIH YSL+HDDLP+MDN Sbjct: 31 LYESMNYSLMQGGKRIRPILSKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDN 90 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG T H Y E AI+AG+GLLTYAF+++++ KT + T G + Sbjct: 91 DDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTANKTATAQEKLDAIQCVAT-AAGPE 149 Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ D+ +++ I ++ ++ + KTGAL + E G I+ +A + L + Sbjct: 150 GMVGGQAFDMLSENKHIPLEELQVLHRGKTGALFNASVELGLILGNADTATRTALMKYAN 209 Query: 216 NLGIIFQLADDLLDC 230 LG++FQ+ DD+LD Sbjct: 210 CLGLLFQITDDILDV 224 >gi|262068286|ref|ZP_06027898.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693] gi|291378024|gb|EFE85542.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693] Length = 298 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 115/201 (57%), Gaps = 4/201 (1%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + + + + YALL GGK++R FL+ L N + ++ IE IH YSL+HDDLP Sbjct: 29 YPETIAKGMEYALLNGGKRLRPFLLFTTLELLNQDIQKGVKSAIGIEMIHSYSLVHDDLP 88 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 ++DN RRGK T H + E AI+ G+ LLTYAF ++S L + ++S T Sbjct: 89 ALDNDDYRRGKLTTHKVFGEAEAILIGDALLTYAFYMLSQKNLNLLSFEQITNIISKTSA 148 Query: 154 I-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G+ GM+GGQM+DI+ E I+ + I K KTG L+ E I+A S++++ L Sbjct: 149 YAGINGMIGGQMIDIESENKKINLETLKYIHKHKTGKLIKLPIEIACIIAGVSEDKRLVL 208 Query: 211 RCFGENLGIIFQLADDLLDCE 231 + E +G+ FQ+ DD+LD E Sbjct: 209 EEYAELIGLAFQVKDDILDIE 229 >gi|217033990|ref|ZP_03439413.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10] gi|216943623|gb|EEC23071.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10] Length = 303 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 125/214 (58%), Gaps = 13/214 (6%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALMGKKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G ++A Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMG-LVAS 202 Query: 202 ASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233 ++E + L+ FG +G+ FQ+ DD++D +D Sbjct: 203 GIKDEGLFKWLQAFGLKMGLCFQVLDDIIDVTQD 236 >gi|170025469|ref|YP_001721974.1| geranyltranstransferase [Yersinia pseudotuberculosis YPIII] gi|169752003|gb|ACA69521.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII] Length = 306 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 119/203 (58%), Gaps = 5/203 (2%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L+ A+RY A++GGK++R +LV +F ++ AAIECIH YSLIHDDLP+ Sbjct: 36 NSNLIEAMRYGAVIGGKRLRPYLVYATGQMFGLSFANLDAPAAAIECIHAYSLIHDDLPA 95 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153 MD+ +RRG+PT H+++ E AI+AG+ L T AF I++ +P + D R +++ L Sbjct: 96 MDDDDLRRGQPTCHVKFGEAHAILAGDALQTLAFSILAEAPMPDVADKDRLSMIIELAQA 155 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210 G GM GQ LD++ E + + I + KTGAL+ A GA+ A A + L Sbjct: 156 SGAAGMCAGQALDLEAETRPVLLGDLEQIHRHKTGALIRAAVRLGALAAGEAGRKTLLSL 215 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + E +G+ FQ+ DD+LD D Sbjct: 216 DRYAEAIGLAFQVQDDILDVIGD 238 >gi|251782890|ref|YP_002997193.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391520|dbj|BAH81979.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 290 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L+ AI Y++ GGK+IR ++ E F V+ A + AA+E IH SLIHDDLP Sbjct: 23 SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Q+ E TAI+AG+ L F +I+ + +L ++ L+ L+ Sbjct: 83 AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + Q+ +I KTG L+ F ++ A++ + +++L Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPFKAAALITEQAMTVRQQLE 200 Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237 G +G FQ+ DD+LD EDL PKK Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232 >gi|146329907|ref|YP_001209557.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A] gi|146233377|gb|ABQ14355.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A] Length = 280 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 117/203 (57%), Gaps = 11/203 (5%) Query: 35 HNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 H++ LL+ A+RY+ L GK++R+ L+ A F++ A+ECIH YSLIHDDL Sbjct: 20 HDESLLTKAMRYSTLNAGKRLRAALIYAVAEDFSLPLSLVDNAACALECIHAYSLIHDDL 79 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN +RRGK + H +DE TAI+AG+ L T AF +++ + IR L+ Sbjct: 80 PAMDNDDLRRGKASCHKAFDEATAILAGDALNTLAFALLARDEKNGLAQIR-----CLSA 134 Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G M+ GQ LD+ ID ++ +I + KTGAL+ A GA+ + + + +L Sbjct: 135 AAG--AMVCGQSLDMIYTGTAIDVQKLQIIHQKKTGALLTAALHLGALPSPDYAHYQTQL 192 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 GE++GI +Q+ DD+LD D Sbjct: 193 TAIGEHIGIAYQIIDDMLDATSD 215 >gi|15645545|ref|NP_207721.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695] gi|2314066|gb|AAD07974.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695] Length = 303 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236 >gi|15675402|ref|NP_269576.1| putative geranyltranstransferase [Streptococcus pyogenes M1 GAS] gi|71911044|ref|YP_282594.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus pyogenes MGAS5005] gi|13622588|gb|AAK34297.1| putative geranyltranstransferase (farnesyl diphosphate synthase) [Streptococcus pyogenes M1 GAS] gi|71853826|gb|AAZ51849.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus pyogenes MGAS5005] gi|323127694|gb|ADX24991.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 290 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L+ AI Y++ GGK+IR ++ E F V+ A + AA+E IH SLIHDDLP Sbjct: 23 SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Q+ E TAI+AG+ L F +I+ + +L ++ L+ L+ Sbjct: 83 AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + Q+ +I KTG L+ F ++ A++ + +++L Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPFKAAALITEQAMTVRQQLE 200 Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237 G +G FQ+ DD+LD EDL PKK Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232 >gi|295700827|ref|YP_003608720.1| polyprenyl synthetase [Burkholderia sp. CCGE1002] gi|295440040|gb|ADG19209.1| Polyprenyl synthetase [Burkholderia sp. CCGE1002] Length = 293 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 119/224 (53%), Gaps = 11/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R++T L+ L +T +L A+RYA+LGG K++R L L Sbjct: 12 ERVETALEHYL-----PAETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAERL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L + AF +++ Sbjct: 67 DAAAAALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDALQSQAFVVLT 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190 S L ++ L+ L G GM GGQ +D+ + ++ + +MKTGAL+ Sbjct: 127 S--DVLGQPQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRPRLETMHRMKTGALLR 184 Query: 191 FACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 A GA+ + L + +G+ FQ+ DD+LD D Sbjct: 185 AAVRMGALAGETPDAQALASLDAYAAAVGLAFQVVDDILDVTTD 228 >gi|29375563|ref|NP_814717.1| geranyltranstransferase [Enterococcus faecalis V583] gi|227555091|ref|ZP_03985138.1| geranyltranstransferase [Enterococcus faecalis HH22] gi|257418572|ref|ZP_05595566.1| polyprenyl synthetase [Enterococcus faecalis T11] gi|29343024|gb|AAO80787.1| geranyltranstransferase [Enterococcus faecalis V583] gi|227175759|gb|EEI56731.1| geranyltranstransferase [Enterococcus faecalis HH22] gi|257160400|gb|EEU90360.1| polyprenyl synthetase [Enterococcus faecalis T11] gi|315168053|gb|EFU12070.1| geranyltranstransferase [Enterococcus faecalis TX1341] Length = 293 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G ++A+ ++ L Sbjct: 144 AGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|299143832|ref|ZP_07036912.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518317|gb|EFI42056.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 290 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 80/214 (37%), Positives = 120/214 (56%), Gaps = 12/214 (5%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFL-VTECASLFNVNHLTA-LRVGAAIECIHCYSLIHD 90 ++ ++ ++ Y+L GGK++R L + S+ T L AIE IH YSLIHD Sbjct: 29 EYQKKVYESMSYSLSSGGKRVRPLLSLLAYKSVSGSEDFTKILPFATAIELIHTYSLIHD 88 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS------SPKTQLKDNIRS 144 DLP+MDN +RRGKPT H Y E AI+AG+GLL + E++S +LK I++ Sbjct: 89 DLPAMDNDDLRRGKPTNHKVYSEAIAILAGDGLLNMSAEVMSRELDKYDEMDELKRAIKA 148 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKMKTGALMCFACESGAIMAHAS 203 M + G+ GM+GGQ++D++ + + + K+KT AL+ A SGAI+A AS Sbjct: 149 --MKYIFTASGVHGMIGGQVIDMEYGYNMNLDICESMYKLKTAALIKAAIVSGAIIAGAS 206 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 E + +GI +Q+ DD+LD E D K+ Sbjct: 207 DEEIATFEEYANCIGIAYQIRDDILDLEADSKKE 240 >gi|170767787|ref|ZP_02902240.1| geranyltranstransferase [Escherichia albertii TW07627] gi|170123275|gb|EDS92206.1| geranyltranstransferase [Escherichia albertii TW07627] Length = 299 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYAIGQMFGVSLSTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L + Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRLAMISELAN 147 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLDAEGKQVPLEALERIHRHKTGALIRAAVRLGALSAGEKGRNALPI 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231 >gi|315574274|gb|EFU86465.1| geranyltranstransferase [Enterococcus faecalis TX0309B] gi|315581571|gb|EFU93762.1| geranyltranstransferase [Enterococcus faecalis TX0309A] Length = 293 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 26 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 86 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G ++A+ ++ L Sbjct: 144 AGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|242240309|ref|YP_002988490.1| geranyltranstransferase [Dickeya dadantii Ech703] gi|242132366|gb|ACS86668.1| Polyprenyl synthetase [Dickeya dadantii Ech703] Length = 303 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 90/232 (38%), Positives = 135/232 (58%), Gaps = 12/232 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66 +L + +RI+T L + S + Q L+ A+ Y +LLGGK++R FLV LFN Sbjct: 7 QLHAHHQRINTTLRRFI----SALPFQQIP-LIEAMAYGSLLGGKRLRPFLVYSTGRLFN 61 Query: 67 VNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + L +L V AA+ECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ L T Sbjct: 62 LP-LESLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQT 120 Query: 126 YAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182 AF I++ + ++ D R ++ L G+ GM GGQ LD++ E +D + I + Sbjct: 121 LAFSILAGTEMPRVSDRDRLSMIAELASASGVGGMCGGQALDLEAEGRQVDLAALEQIHR 180 Query: 183 MKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ + GA+ A A + L + +G+ FQ+ DD+LD D Sbjct: 181 HKTGALIRASVRLGALAAGEAGRQVMPSLDRYANAIGLAFQVQDDILDVIGD 232 >gi|225388185|ref|ZP_03757909.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme DSM 15981] gi|225045743|gb|EEG55989.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme DSM 15981] Length = 303 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 13/232 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65 ++++ +K I+ I++ L + H +T +L A+ Y++ GGK++R L+ E LF Sbjct: 9 AEMERRTKEIEQIIEPYLPEETGHQKT-----VLEAMNYSMKAGGKRLRPMLMQEVCRLF 63 Query: 66 NVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + L + AA+E IH SL+HDDLP MD+ +RRGKP+ +Y E ++ G+ L+ Sbjct: 64 TGDVLDCVIPFMAAVEMIHTSSLVHDDLPCMDDDRLRRGKPSTWAEYGEDIGVLTGDALM 123 Query: 125 TYAFEIISSP-KTQLKDNIRSQLMLS---LTHNIGLQGMLGGQMLDIQ--DEFIDETQVF 178 YAFE + +T + + S + S L H G GM+GGQ +D++ I ++ Sbjct: 124 MYAFETAARAFETSIDPDEISAIGRSIGILAHKTGAFGMIGGQTVDVELAGSDIPRDKLD 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I ++KTGAL+ + GA++ A++ + + + ++G+ FQ+ DD+LD Sbjct: 184 FIYRLKTGALLEASMLIGAVLGGAAEEDCKIVERLASHIGMAFQIQDDILDV 235 >gi|83716251|ref|YP_438813.1| geranyltranstransferase [Burkholderia thailandensis E264] gi|167577162|ref|ZP_02370036.1| geranyltranstransferase [Burkholderia thailandensis TXDOH] gi|167615332|ref|ZP_02383967.1| geranyltranstransferase [Burkholderia thailandensis Bt4] gi|257141897|ref|ZP_05590159.1| geranyltranstransferase [Burkholderia thailandensis E264] gi|83650076|gb|ABC34140.1| geranyltranstransferase [Burkholderia thailandensis E264] Length = 294 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 121/224 (54%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R++T L L +T +L A+RYA+LGG K++R L L + Sbjct: 12 ERVETALGHYL-----PAETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAAL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +A+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L + AF ++ Sbjct: 67 NAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFVALT 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMC 190 L + ++ L+ L G GM GGQ +D+ + T+ + + +MKTGAL+ Sbjct: 127 D-AAALPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLR 185 Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 + GA+ ++ R L + +G+ FQ+ DD+LD D Sbjct: 186 ASVRMGALAGETPSDDAMRALDAYAAAVGLAFQVVDDILDVTTD 229 >gi|13475328|ref|NP_106892.1| geranyltranstransferase [Mesorhizobium loti MAFF303099] gi|14026080|dbj|BAB52678.1| geranyltranstransferase [Mesorhizobium loti MAFF303099] Length = 321 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 16/241 (6%) Query: 2 NGGLPSK--LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58 +G LPS+ +Q+ +R++ L LL + L++A+RYA L GGK+ R+ L Sbjct: 17 SGRLPSEIWMQDGVRRVEQALARLLCA-----EDDGETELMAAMRYATLHGGKRTRALLC 71 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 +L + VGAAIE +H +L+HDDLP+MD+ +RRG PTVH+++ E TAI+ Sbjct: 72 LATGALADTPAPMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAIL 131 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 G+ L +AF ++S DN R L+ L + +G GGQ +D+ + ++ + Sbjct: 132 VGDALQAHAFLTLASLDAP-SDN-RIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDR 189 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEE 232 + + +MK+GAL+ + GA+ A A L C + G+ Q+ DD+LD Sbjct: 190 IVAMHRMKSGALVRASVRMGALCAIAEDAAHAALYCALDRYSACFGLALQVVDDILDATA 249 Query: 233 D 233 D Sbjct: 250 D 250 >gi|322412220|gb|EFY03128.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 290 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L+ AI Y++ GGK+IR ++ E F V+ A + AA+E IH SLIHDDLP Sbjct: 23 SEELIDAILYSVDSGGKRIRPLIILEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Q+ E TAI+AG+ L F +I+ + +L ++ L+ L+ Sbjct: 83 AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + Q+ +I KTG L+ F ++ A++ + +++L Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPFKAAALVTEQTITVRQQLE 200 Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237 G +G FQ+ DD+LD EDL PKK Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232 >gi|310943001|pdb|3P8L|A Chain A, Crystal Structure Of Polyprenyl Synthase From Enterococcus Faecalis V583 gi|310943002|pdb|3P8L|B Chain B, Crystal Structure Of Polyprenyl Synthase From Enterococcus Faecalis V583 Length = 302 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 N+RL A+ Y++ GGK++R LV + F T +V A++E IH YSLIHDDLP Sbjct: 35 NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 94 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H + E TAI+AG+GLLT AF+++S + L + + LM L Sbjct: 95 AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 152 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G QGM+ GQM DI+ E + T ++ + + KTGAL+ FA +G ++A+ ++ L Sbjct: 153 AGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 212 Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237 F + G+ FQ+ DDLLD E DL KK Sbjct: 213 QFAHHYGLAFQIRDDLLDATSTEADLGKK 241 >gi|261416040|ref|YP_003249723.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 295 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 112/195 (57%), Gaps = 10/195 (5%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RY++ GGK++R L +F +A+E +H +SLIHDDLP +D Sbjct: 39 RLHEAMRYSMFAGGKRLRPGLAKATFDMFGGKGEKIWLATSALEMLHTFSLIHDDLPCVD 98 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGK T H ++ E TA++AG+ L +AFE++ ++ + L H +G Sbjct: 99 NDDYRRGKLTSHKKFGEATAVMAGDALCIHAFEMMGKTGN-------AKAIELLAHLLGT 151 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GG+M DI+ E +D V I KT AL+ + GA++A AS+ + E +R +G Sbjct: 152 YGMIGGEMTDIECEGKTVDLEIVDYIHYHKTAALIEASLLVGAMLAKASEKDMEIIRNYG 211 Query: 215 ENLGIIFQLADDLLD 229 ++G+ FQ+ DD+LD Sbjct: 212 RSIGLAFQIVDDILD 226 >gi|218132228|ref|ZP_03461032.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC 43243] gi|217992887|gb|EEC58887.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC 43243] Length = 307 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 116/202 (57%), Gaps = 10/202 (4%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV----GAAIECIHCYSLIHDDLPSMD 96 A+ Y+++ GGK+IR +++E L + A +V AA+E IH YSL+HDDLP+MD Sbjct: 42 AMNYSVMAGGKRIRPLIMSEAYKLCGGSEECAAQVLHPFMAALEFIHTYSLVHDDLPAMD 101 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS---LTHN 153 N RRG+ T H + E I+AG+ LL YA+E + + D R + + + + Sbjct: 102 NDMYRRGQLTTHAAFGEDMGILAGDALLNYAYETMLRAACDMTDTYRERSIRAASVIAGK 161 Query: 154 IGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G+ GM+GGQ LD++ ++ Q+ I ++KTGAL+ A +GAI+A A +L Sbjct: 162 AGIYGMVGGQTLDVKLTGMPMNAGQLDYIFRLKTGALIEAAFMAGAILAGAPDEVTAKLE 221 Query: 212 CFGENLGIIFQLADDLLDCEED 233 G+ +G+ FQ+ DD+LD D Sbjct: 222 KAGDLVGVAFQIQDDILDVTGD 243 >gi|172062807|ref|YP_001810458.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6] gi|171995324|gb|ACB66242.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6] Length = 294 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 109/205 (53%), Gaps = 15/205 (7%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RYA+LGG K++R L L AA+E IH YSL+HDD+P MD Sbjct: 31 QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151 + +RRGKPTVH+QYDE TA++ G+ L + AF ++ SP Q + L+ L Sbjct: 91 DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDVDALSPVQQ------AALVRELA 144 Query: 152 HNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-E 208 G GM GGQ +D+ + T Q+ + +MKTGAL+ A GA+ E Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLEKMHRMKTGALLRAAVRMGALAGDTPSAETLA 204 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 205 ALDVYAAAVGLAFQVVDDILDVTTD 229 >gi|325265404|ref|ZP_08132128.1| geranyltranstransferase [Clostridium sp. D5] gi|324029405|gb|EGB90696.1| geranyltranstransferase [Clostridium sp. D5] Length = 296 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 112/200 (56%), Gaps = 11/200 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 ++ A+ YAL+ GGK++R L+ E LF AAIE IH YSL+HDDLP+MDN Sbjct: 32 IMEAMEYALMAGGKRLRPMLMQETYRLFGGCGTRIEPFMAAIEMIHTYSLVHDDLPAMDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-----PKTQLKDNIRSQLMLSLTH 152 RRG+ T H+ Y E I+ G+ LL AFE + P+ L+ Q+ L Sbjct: 92 DDYRRGRKTTHVMYGEDIGILTGDALLNCAFETAAKAFDMEPEKSLQTGKALQI---LAG 148 Query: 153 NIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G+ GM+GGQ++D++ + I ++ I K+KTGAL+ + GA++A A++ + + Sbjct: 149 KAGIYGMIGGQVVDVKSTGDQISGEKLNFIYKLKTGALIEASMMIGAVLAGAAREQVNAV 208 Query: 211 RCFGENLGIIFQLADDLLDC 230 +G+ FQ+ DD+LD Sbjct: 209 EEIAGKVGLAFQIQDDILDV 228 >gi|292659743|pdb|3LLW|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter Pylori 26695 gi|292659744|pdb|3LLW|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter Pylori 26695 gi|292659745|pdb|3LLW|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter Pylori 26695 gi|292659746|pdb|3LLW|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter Pylori 26695 Length = 311 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 28 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 87 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ L+ +I Sbjct: 88 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 145 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 146 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASG 205 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 206 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 238 >gi|262375796|ref|ZP_06069028.1| geranyltranstransferase [Acinetobacter lwoffii SH145] gi|262309399|gb|EEY90530.1| geranyltranstransferase [Acinetobacter lwoffii SH145] Length = 302 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 115/204 (56%), Gaps = 7/204 (3%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L SA+ +A +LGGK++R L A+L N N R AIE IHCYSL HDDLP Sbjct: 34 EPLRSAVHHAVMLGGKRVRPALCYATAALKPNQNSAAVRRAAVAIEFIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN +RRG+PT H+ Y E TA++AG+ L + AFEI+ S + + ++L + Sbjct: 94 MDNDLLRRGQPTCHVAYGEDTALLAGDILQSMAFEILGSRLFDQGPAVEASIVLKQMQIL 153 Query: 155 GLQG--MLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQN-EKER 209 M+ GQ+LD+Q E ID+ + I + KTGAL+ A A+ + + Sbjct: 154 ATASSKMVNGQVLDLQSEGKKIDQQALETIHRNKTGALISAAIMMAAVTIFDGTDLAIPK 213 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 LR FG+ +G+ FQ+ DD+LD D Sbjct: 214 LREFGQAIGLAFQVQDDILDIISD 237 >gi|223038350|ref|ZP_03608644.1| geranyltranstransferase [Campylobacter rectus RM3267] gi|222880207|gb|EEF15294.1| geranyltranstransferase [Campylobacter rectus RM3267] Length = 659 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 116/195 (59%), Gaps = 6/195 (3%) Query: 42 AIRYALL-GGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 A+ Y L GGK R+ LV A++ A V A E +H YSLIHDDLP+MD+ Sbjct: 405 ALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAAFHVALAFETMHSYSLIHDDLPAMDDSD 464 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+P++H+++DEVTAI+AG+ L T+AF I+ + L + R + + L+ N G+ GM Sbjct: 465 LRRGQPSLHVKFDEVTAILAGDALNTHAFYQIA--RAPLDADARIKCVEILSRNAGIYGM 522 Query: 160 LGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ +D +++ + ++ + KT L+ + ++G ++A + E R+ G +L Sbjct: 523 ALGQAVDCYFENQKLGLEELKFLHIHKTARLIAASLQAGCVVAGLDETEAARIYDIGLDL 582 Query: 218 GIIFQLADDLLDCEE 232 G+ FQ+ADD++D + Sbjct: 583 GLAFQIADDIIDATQ 597 >gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 299 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 134/246 (54%), Gaps = 23/246 (9%) Query: 5 LPSKLQE----NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 + KL+E + K+++ L+ +L + + + Q A+RY++ GGK++R L Sbjct: 2 ISRKLEEYINLSQKKVEEHLEKILAERSPEIIYQ-------AMRYSVFAGGKRLRPLLCL 54 Query: 60 ECASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 + + + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A Sbjct: 55 LSYQMLSKDQEVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIA 114 Query: 117 IIAGNGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173 I+AG+ LL A E+ + K+ +++ L G++GM+GGQ++DI + D Sbjct: 115 ILAGDALLNLAAEVCMDWILRYGCEKNLVKAAKYLFWAS--GVEGMIGGQVIDITNSGQD 172 Query: 174 ---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 E +F + KT L+ +C GA++A A + + FG+NLG+ FQ+ DD+LD Sbjct: 173 IKSEELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVYDMEEFGKNLGLAFQIRDDILDV 232 Query: 231 EEDLPK 236 D K Sbjct: 233 IGDSKK 238 >gi|332523011|ref|ZP_08399263.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176] gi|332314275|gb|EGJ27260.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176] Length = 289 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 6/203 (2%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 +++L++AIRY A GGK+IR L+ E F+V + + AA+E IH SLIHDDLP Sbjct: 22 SEQLIAAIRYSAESGGKRIRPLLLLELLEAFSVTLTDSHYDIAAALEMIHTGSLIHDDLP 81 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG T H ++DE TAI+AG+ L AF +I+ T L NI+ L+ SL+++ Sbjct: 82 AMDNDDYRRGCLTNHKKFDEATAILAGDSLFLDAFALIAG--TNLSANIKVDLIESLSNS 139 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + T ++ I KTG L+ + + A +A + + Sbjct: 140 SGTFGMVGGQMLDMKAEGQELTLAELQEIHSHKTGCLLAYPFWAAAKIAEVDEQILLEIY 199 Query: 212 CFGENLGIIFQLADDLLDCEEDL 234 G+ +G FQ+ DD+LD D Sbjct: 200 QAGQKVGHAFQVRDDILDVTADF 222 >gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus] Length = 364 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 70/196 (35%), Positives = 109/196 (55%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ A+RY++L GGK++R L L A+ A+E IH SLIHDD P MD Sbjct: 99 KIHEAMRYSVLAGGKRVRPVLCIAACELVGGEESMAMPAACAVEMIHTMSLIHDDPPCMD 158 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H + E A++AG+ LL ++FE ++ + + + L +IG Sbjct: 159 NDDLRRGKPTNHKVFGEDIAVLAGDALLAFSFEHMTGSTVGVSPARIVRAVGELAKSIGS 218 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E + + + I KT AL+ + GAI+ S E E+LR F Sbjct: 219 EGLVAGQVVDICSEGLTDVGLEHLEFIHVHKTAALLEGSVVLGAILGGGSDEEVEKLRKF 278 Query: 214 GENLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 279 ARCIGLLFQVVDDILD 294 >gi|171320202|ref|ZP_02909262.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5] gi|171094554|gb|EDT39608.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5] Length = 294 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 109/205 (53%), Gaps = 15/205 (7%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RYA+LGG K++R L L AA+E IH YSL+HDD+P MD Sbjct: 31 QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151 + +RRGKPTVH+QYDE TA++ G+ L + AF ++ SP Q + L+ L Sbjct: 91 DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDGDALSPVQQ------AALVRELA 144 Query: 152 HNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-E 208 G GM GGQ +D+ + T Q+ + +MKTGAL+ A GA+ E Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGDPPSAETLA 204 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 205 ALDVYAGAVGLAFQVVDDILDVTTD 229 >gi|146308855|ref|YP_001189320.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp] gi|145577056|gb|ABP86588.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp] Length = 295 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 79/224 (35%), Positives = 132/224 (58%), Gaps = 10/224 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+D L+ L + +Q RL A+RY+++ GGK++R LV + N A Sbjct: 12 RVDAALEPLFQPPRAELQ-----RLYEAMRYSVMNGGKRVRPLLVYAACEALDGNLDRAD 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE +AI+AG+GL + AFE+++ Sbjct: 67 GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDGLQSLAFEVLAD 126 Query: 134 PKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190 + +D +R Q++ +L+ G GM+GGQ +D+ + +D+ + + + KTGAL+ Sbjct: 127 RRRNPQDAEVRLQMIDALSSAAGPAGMVGGQAIDLGSVGQQLDQAALETMHRHKTGALIE 186 Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ + +A + + L + +G+ FQ+ DD+LD E D Sbjct: 187 ASVLLGALASGNADELSLKALLQYARAVGLAFQVQDDILDVESD 230 >gi|42519419|ref|NP_965349.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533] gi|41583707|gb|AAS09315.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533] Length = 288 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 84/235 (35%), Positives = 127/235 (54%), Gaps = 21/235 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLF 65 KL++ ++ +D+ L + H+ T+ ++ S I Y+++ GGK++R L A+L Sbjct: 2 KLKDFQEKYTPQIDNFLKE---HLVTEIDNPTFSKIMSYSVMAGGKRLRPLLF--LATLE 56 Query: 66 NVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +NH LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+G Sbjct: 57 TLNHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDG 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMI 180 LL + I+ + L + ++ +G GM+GGQ LDI D + MI Sbjct: 117 LLPLGIQWITEGSNS------AALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKMI 170 Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +M KTG L+ + + AI A A+ +E RL F + G +Q+ DDL+D E Sbjct: 171 DQMEWLKTGCLIEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVE 225 >gi|330978746|gb|EGH77971.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 295 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ LD L ++ RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALDGLFKAPGPELE-----RLYQAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHPTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + HA Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230 >gi|317182228|dbj|BAJ60012.1| geranyltranstransferase [Helicobacter pylori F57] Length = 303 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H ++ H + L GGK+ R FL CA + ++ ++ IEC+H Sbjct: 26 HFESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALGIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236 >gi|270263554|ref|ZP_06191823.1| geranyltranstransferase [Serratia odorifera 4Rx13] gi|270042438|gb|EFA15533.1| geranyltranstransferase [Serratia odorifera 4Rx13] Length = 306 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 123/200 (61%), Gaps = 11/200 (5%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMD 96 +++A+R+ ALLGGK++R FLV +F V+ L L V AA+ECIH YSLIHDDLP+MD Sbjct: 39 MVAAMRHGALLGGKRLRPFLVYTTGQMFGVS-LNNLDVPAAAVECIHAYSLIHDDLPAMD 97 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHN 153 + +RRG+PT HI++ E +AI+AG+ L T AF I++ P L+D R ++ L Sbjct: 98 DDDLRRGQPTCHIKFGEASAILAGDALQTLAFSILADADMPDVALRD--RLAMVSELATA 155 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210 G GM GGQ LD++ E ID + +I + KTGAL+ A GA+ A + +L Sbjct: 156 SGAAGMCGGQSLDLEAEGRQIDLPALELIHRHKTGALIRAAVRLGALAAGEPGRAALPQL 215 Query: 211 RCFGENLGIIFQLADDLLDC 230 + +G+ FQ+ DD+LD Sbjct: 216 DRYAAAIGLAFQVQDDILDV 235 >gi|19746452|ref|NP_607588.1| geranyltranstransferase [Streptococcus pyogenes MGAS8232] gi|306827052|ref|ZP_07460350.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782] gi|19748654|gb|AAL98087.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS8232] gi|304430798|gb|EFM33809.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782] Length = 290 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 123/212 (58%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L+ AI Y++ GGK+IR ++ E F V+ A + AA+E IH SLIHDDLP Sbjct: 23 SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Q+ E TAI+AG+ L F +I+ + +L ++ L+ L+ Sbjct: 83 AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + +Q+ +I KTG L+ F ++ A++ + +++L Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLSQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200 Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237 G +G FQ+ DD+LD EDL PKK Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232 >gi|293400618|ref|ZP_06644763.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305644|gb|EFE46888.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 280 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 7/198 (3%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + ++ A++Y+L+ GGK+IR ++ + + V AAIE IH YSLIHDDLP+ Sbjct: 17 DSKVKDAMQYSLMAGGKRIRPQILLAALQCYGIEERVGYPVAAAIEMIHTYSLIHDDLPA 76 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRGKPT H+Q+DE TAI+AG+ LLT AF + + + ++ +L+ Sbjct: 77 MDDDTLRRGKPTCHVQFDEATAILAGDALLTQAFLLGAMASEDAM--VNCAIVKALSRYA 134 Query: 155 GLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+ GQ+ D++ E ++ ++ I KTG L+ A + H + + Sbjct: 135 GADGMVLGQIKDLEGEVKEDLTLAELKDIHYYKTGRLLTLPLVCAAYLTH-HEEDIPAWE 193 Query: 212 CFGENLGIIFQLADDLLD 229 G +LG+ FQ+ DD+LD Sbjct: 194 QIGSDLGLSFQIQDDILD 211 >gi|308184713|ref|YP_003928846.1| geranyltranstransferase [Helicobacter pylori SJM180] gi|308060633|gb|ADO02529.1| geranyltranstransferase [Helicobacter pylori SJM180] Length = 303 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ L+ +I Sbjct: 86 TYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSVNGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236 >gi|268319202|ref|YP_003292858.1| geranyltranstransferase [Lactobacillus johnsonii FI9785] gi|262397577|emb|CAX66591.1| geranyltranstransferase [Lactobacillus johnsonii FI9785] Length = 288 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 84/235 (35%), Positives = 127/235 (54%), Gaps = 21/235 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLF 65 KL++ ++ +D+ L + H+ T+ ++ S I Y+++ GGK++R L A+L Sbjct: 2 KLKDFQEKYTPQIDNFLKE---HLVTEIDNPTFSKIMSYSVMAGGKRLRPLLF--LATLE 56 Query: 66 NVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +NH LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+G Sbjct: 57 TLNHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDG 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMI 180 LL + I+ + L + ++ +G GM+GGQ LDI D + MI Sbjct: 117 LLPLGIQWITEGSNS------AALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKMI 170 Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +M KTG L+ + + AI A A+ +E RL F + G +Q+ DDL+D E Sbjct: 171 DQMEWLKTGCLIEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVE 225 >gi|224418966|ref|ZP_03656972.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT 98-5491] gi|253827914|ref|ZP_04870799.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491] gi|313142478|ref|ZP_07804671.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT 98-5491] gi|253511320|gb|EES89979.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491] gi|313131509|gb|EFR49126.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT 98-5491] Length = 288 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 5/190 (2%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 L GGK+ R L+ + A A+E +H YSLIHDDLP+MDN +RRG P Sbjct: 39 LSGGKRFRPKLLLSVVYANKAKFASKAFAPALALEILHTYSLIHDDLPAMDNALLRRGVP 98 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+H +YDE AI+ G+GL T++F I+ K++LK I+++L+ L++N G+ GM+ GQ L Sbjct: 99 TLHHKYDECGAILVGDGLNTHSFYCIA--KSKLKPKIKNKLIEILSYNGGIHGMVLGQAL 156 Query: 166 D--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D + + + ++ I KT L+ A + G I+A + ++L G +LG+ FQ+ Sbjct: 157 DCYFEKQTLPLEKLRTIHLNKTAKLIAAALQMGGIIAKCDKKFCQKLYKIGLDLGLFFQI 216 Query: 224 ADDLLDCEED 233 DD++D + Sbjct: 217 RDDIIDATQS 226 >gi|251796322|ref|YP_003011053.1| polyprenyl synthetase [Paenibacillus sp. JDR-2] gi|247543948|gb|ACT00967.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2] Length = 302 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 74/177 (41%), Positives = 104/177 (58%), Gaps = 15/177 (8%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 AL V AIE IH YSL+HDDLP+MDN RRGK T H + E AI+AG+ LLT+AF +I Sbjct: 71 ALPVACAIEYIHTYSLVHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDALLTHAFHLI 130 Query: 132 SSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDE----FIDETQVFMIQKM 183 PK I +++ L + ++ G +GM+GGQ D+Q E I+E + + Sbjct: 131 --PKVARLGGISAEVALDIVEDLAMLAGARGMVGGQAADMQGEQGITSIEELEYIHLH-- 186 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 KT L+ F+ +G + AS + E LR +G N+G+ FQ+ DD+LD E+ L KK Sbjct: 187 KTSDLIVFSVTAGGRIGGASAEQLEALRHYGRNIGLAFQIQDDILDLIGDEKKLGKK 243 >gi|89255952|ref|YP_513314.1| geranyltranstransferase [Francisella tularensis subsp. holarctica LVS] gi|115314435|ref|YP_763158.1| geranyltranstransferase [Francisella tularensis subsp. holarctica OSU18] gi|167009142|ref|ZP_02274073.1| geranyltranstransferase [Francisella tularensis subsp. holarctica FSC200] gi|169656540|ref|YP_001428011.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367309|ref|ZP_04983335.1| geranyltranstransferase [Francisella tularensis subsp. holarctica 257] gi|254368783|ref|ZP_04984796.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp. holarctica FSC022] gi|290954603|ref|ZP_06559224.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica URFT1] gi|295311946|ref|ZP_06802770.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica URFT1] gi|89143783|emb|CAJ78986.1| Geranyltranstransferase [Francisella tularensis subsp. holarctica LVS] gi|115129334|gb|ABI82521.1| geranyltranstransferase [Francisella tularensis subsp. holarctica OSU18] gi|134253125|gb|EBA52219.1| geranyltranstransferase [Francisella tularensis subsp. holarctica 257] gi|157121704|gb|EDO65874.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp. holarctica FSC022] gi|164551608|gb|ABU61055.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 293 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 109/198 (55%), Gaps = 11/198 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LLSA+ Y+ GGK+IR+ V ++ ++ A+E IH YSLIHDDLP+MDN Sbjct: 28 LLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKIAFAVESIHTYSLIHDDLPAMDN 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPT HI+++E TAI+AG+ L AFEI+ D ++ L G Sbjct: 88 DTLRRGKPTCHIKFNEATAILAGDALQALAFEILQDINYSDIDKLKKINKL-FAQYCGAS 146 Query: 158 GMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLR 211 GM+GGQ LDI+ E I+E Q+ I K A M AC + +QN + + L Sbjct: 147 GMVGGQQLDIEGENKKLKIEELQILHINKT---AKMFRACIVLPYILSQNQNSQIEDLLV 203 Query: 212 CFGENLGIIFQLADDLLD 229 + +G+ FQ+ DD+LD Sbjct: 204 RLSDLIGLCFQIKDDILD 221 >gi|302872147|ref|YP_003840783.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 299 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 84/246 (34%), Positives = 133/246 (54%), Gaps = 23/246 (9%) Query: 5 LPSKLQE----NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 + KL+E + K ++ LD +L + + + Q A+RY++ GGK++R L Sbjct: 2 ISRKLEEYINLSQKNVEEHLDKILKEKSPEIIYQ-------AMRYSVFAGGKRLRPLLCL 54 Query: 60 ECASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 + + + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A Sbjct: 55 LSYQMVSKDKEIDRKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTSHVVFGEAIA 114 Query: 117 IIAGNGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173 I+AG+ LL A E+ + K+ +++ L G++GM+GGQ++DI + D Sbjct: 115 ILAGDALLNLAAEVCLNWILNYGCEKNLVKAAKYLFWAS--GVEGMIGGQVIDITNSGQD 172 Query: 174 ---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 E +F + KT L+ +C GA++A A + L +G+NLG+ FQ+ DD+LD Sbjct: 173 IKSEELLFEMHLKKTSRLIQASCVCGALVAGAEDSVVSDLEEYGKNLGLAFQIRDDVLDV 232 Query: 231 EEDLPK 236 D K Sbjct: 233 IGDSKK 238 >gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM 12885] gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM 12885] Length = 308 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 8/204 (3%) Query: 38 RLLSAIRY-ALLGGKKIRSFLV---TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 R+ A+RY AL GGK +R LV C R AA+E +H YSLIHDDLP Sbjct: 40 RIHEAMRYSALAGGKLLRPVLVMAAARCVGGPEAVTPAVRRAAAAVELVHTYSLIHDDLP 99 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG+P H+ + E AI+AG+ LLT AFE+++ P+ + + L Sbjct: 100 AMDDDAMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADPAVALAVAEELAR 159 Query: 153 NIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G G++GGQ+ D +Q +D ++ I + KTGAL GA +A A + E E Sbjct: 160 AAGTAGLIGGQVDDLDAVQGAPLDLARLQSIHRRKTGALFRACVRMGARLAGAGEGELEA 219 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + G FQ+ DD+LD D Sbjct: 220 LTAYATAFGEAFQIVDDILDVTGD 243 >gi|26246427|ref|NP_752466.1| geranyltranstransferase [Escherichia coli CFT073] gi|227884571|ref|ZP_04002376.1| geranyltranstransferase [Escherichia coli 83972] gi|300988027|ref|ZP_07178507.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|301049622|ref|ZP_07196573.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|26106825|gb|AAN79010.1|AE016756_193 Geranyltranstransferase [Escherichia coli CFT073] gi|227838657|gb|EEJ49123.1| geranyltranstransferase [Escherichia coli 83972] gi|300298615|gb|EFJ55000.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|300407579|gb|EFJ91117.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|307552326|gb|ADN45101.1| geranyltranstransferase [Escherichia coli ABU 83972] gi|315294200|gb|EFU53551.1| polyprenyl synthetase [Escherichia coli MS 153-1] Length = 299 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 118/204 (57%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSINTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ A +N Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRNALPV 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231 >gi|295093395|emb|CBK82486.1| Geranylgeranyl pyrophosphate synthase [Coprococcus sp. ART55/1] Length = 294 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 76/226 (33%), Positives = 123/226 (54%), Gaps = 9/226 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 + E + RI+ I++ L +T + A+ Y++ GGK++R L+ E LF Sbjct: 6 IAEKAARINDIVESYLPPADGFNRT-----VCEAMAYSVEAGGKRLRPMLMEETYRLFGG 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AAIE IH YSLIHDDLP++DN RRG+ T H+ + E AI+AG+ LL YA Sbjct: 61 KSEVIKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRKTSHVVFGEAMAILAGDALLNYA 120 Query: 128 FEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184 +E +D + + M L G+ GM+GGQ++D++ + + + Q+ + + K Sbjct: 121 YETACKAFGMGEDIHAVASAMCVLAQKPGINGMIGGQVVDVEMTGKELSKEQLEYVYENK 180 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 TGAL+ + GAI+A A + + + ++G+ FQ+ DD+LD Sbjct: 181 TGALIEASMMIGAILAGADEAKVAAVHKIASDVGMAFQIQDDILDV 226 >gi|167842189|ref|ZP_02468873.1| geranyltranstransferase [Burkholderia thailandensis MSMB43] Length = 294 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 120/224 (53%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R++T L L +T +L A+RYA+LGG K++R L L + Sbjct: 12 ERVETALGHYL-----PAETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAAL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +A+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L + AF ++ Sbjct: 67 NAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFVALT 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMC 190 L + ++ L+ L G GM GGQ +D+ + T+ + + +MKTGAL+ Sbjct: 127 D-AAALPADRQAALVCELALASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLR 185 Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 + GA+ + R L + +G+ FQ+ DD+LD D Sbjct: 186 ASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTD 229 >gi|320103326|ref|YP_004178917.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644] gi|319750608|gb|ADV62368.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644] Length = 336 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 90/237 (37%), Positives = 124/237 (52%), Gaps = 17/237 (7%) Query: 14 KRIDTILDDLLLQTASHMQTQHN-----DRLLSAIRYALLGGKKI-RSFLVTECASLFNV 67 +RI+T LD LL H RL A RY+ LGG K+ R L A Sbjct: 41 QRIETALDALLPPVEEHPNAAGPYGVCPARLARAARYSTLGGGKLLRPKLTLLAAEAVGG 100 Query: 68 NHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + AL A+E +H YSL+HDDLP+MD+ +RRG+PT H+++DE TAI+AG+GLLT Sbjct: 101 DDAIENALAAACAVELVHAYSLVHDDLPAMDDDDLRRGRPTTHVEFDEATAILAGDGLLT 160 Query: 126 YAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFM 179 AF + + ++ R+ + L G +GM+GGQM D+Q E I Q + Sbjct: 161 LAFGAVVA---GVRPAERAAACVGILAEAAGFRGMVGGQMADLQAESIPREQGSVELLEA 217 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ + GA + A+ L +G LG+ FQ+ DDLLD D K Sbjct: 218 IHLRKTGALLRASLTMGAAASGANAELTTALDEYGRALGLAFQIQDDLLDATGDPAK 274 >gi|294793724|ref|ZP_06758861.1| geranyltranstransferase [Veillonella sp. 3_1_44] gi|294455294|gb|EFG23666.1| geranyltranstransferase [Veillonella sp. 3_1_44] Length = 292 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 112/199 (56%), Gaps = 4/199 (2%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q ++L ++ Y+L+ GGK+IR L + + A+ECIH YSL+HDDL Sbjct: 26 QEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDL 85 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN RRG T H Y E AI+AG+GLLTYAF++++S T + + + Sbjct: 86 PAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTS-NTVASAQQKLDAIQCVAT 144 Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G +GM+GGQ D+ +D+ I ++ ++ KTGAL + E G I+ A+ + L Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGCANNTTRTFL 204 Query: 211 RCFGENLGIIFQLADDLLD 229 + LG++FQ+ DD+LD Sbjct: 205 MEYSNCLGLLFQITDDILD 223 >gi|108563335|ref|YP_627651.1| geranyltranstransferase [Helicobacter pylori HPAG1] gi|107837108|gb|ABF84977.1| geranyltranstransferase [Helicobacter pylori HPAG1] Length = 303 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ L+ +I Sbjct: 86 TYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQD 236 >gi|322378507|ref|ZP_08052957.1| geranyltranstransferase [Helicobacter suis HS1] gi|321149068|gb|EFX43518.1| geranyltranstransferase [Helicobacter suis HS1] Length = 296 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 108/190 (56%), Gaps = 11/190 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+ R L+ S F +HL A + A+E +H YSLIHDDLP MDN +RR P Sbjct: 45 GGKRFRPKLLLAVLSSFMRSHLMIKNAFPIALALEVLHTYSLIHDDLPCMDNAPLRRYHP 104 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+H+ Y A + G+GL TYAFE++SS +L + ++ L+ +L H G+ GM+ GQ + Sbjct: 105 TLHVSYGVTVATLVGDGLNTYAFELLSS--ARLPNALKVSLISTLAHCGGVFGMVLGQAI 162 Query: 166 D--IQDEFIDETQVFMIQKMKTGALMCFACESGAIM----AHASQNEKERLRCFGENLGI 219 D + + + Q+ ++ +KT L+ + + GA++ A N L FG LG+ Sbjct: 163 DCYFEHKPLLREQLEILHTLKTAKLIAASLKMGALIAKKYARTPTNLPTTLFNFGLKLGL 222 Query: 220 IFQLADDLLD 229 FQ+ DD++D Sbjct: 223 FFQVRDDIID 232 >gi|58337602|ref|YP_194187.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus acidophilus NCFM] gi|227904242|ref|ZP_04022047.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796] gi|58254919|gb|AAV43156.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus acidophilus NCFM] gi|227867890|gb|EEJ75311.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796] Length = 289 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 19/223 (8%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRS--FLVTECASLFNVNHLTALR 74 ++D+ L A H+ ++ +D+ +S I Y+++ GGK++R FL T A + + +R Sbjct: 14 VIDNYL---AKHLASEIDDQKISQIMSYSVMAGGKRLRPLLFLATLNALGKKIEE-SEIR 69 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 70 LACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGVQWIAEG 129 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-----FIDETQVFMIQKMKTGALM 189 S+L++ +T IG GM+GGQ LDI DE + ++ +KTG L+ Sbjct: 130 SNS------SELVIMITKAIGANGMVGGQYLDIDSTNNASVADDEKFINKMEWLKTGCLI 183 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E A+ A AS E+ +L F + G +Q+ DDL+D E Sbjct: 184 QASVEMAAVYAKASDIEQVKLVDFAKTFGRSYQIYDDLVDVVE 226 >gi|326794293|ref|YP_004312113.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1] gi|326545057|gb|ADZ90277.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1] Length = 301 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 89/230 (38%), Positives = 131/230 (56%), Gaps = 17/230 (7%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+D L+D L Q + D L A+RY+L GGK++R LV A LF+ ++ Sbjct: 13 RVDRYLNDQLTQYDA------ADYLHEAMRYSLFNGGKRVRPMLVYATAELFSESNRLTD 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 AAIE IH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ L T+AFE++S+ Sbjct: 67 ASAAAIESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQFDEATAILTGDALQTFAFELLSA 126 Query: 134 PKTQL-KDNIRS------QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184 ++ DN+ +L+ SL+ G GM+ GQM+D+ D I + + + K Sbjct: 127 SYNEIDTDNLADCKTRQLRLIRSLSRASGRFGMVTGQMIDLNNVDRSITLETLEKMHQHK 186 Query: 185 TGALMCFACESGA-IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TGAL+ + GA + Q +L + +G+ FQ+ DD++D D Sbjct: 187 TGALIRASVLMGAQSVGIEDQKILSQLDKYASAIGLAFQVQDDIIDITSD 236 >gi|317012738|gb|ADU83346.1| geranyltranstransferase IspA [Helicobacter pylori Lithuania75] Length = 303 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 123/214 (57%), Gaps = 13/214 (6%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL C+ + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGQKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ L+ I Sbjct: 86 TYSLIHDDLPCMDNATLRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESPII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G ++A Sbjct: 144 VELVKILSTNGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMG-LVAS 202 Query: 202 ASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233 +NE+ + L+ FG G+ FQ+ DD++D +D Sbjct: 203 GIKNEELFKWLQAFGLKTGLCFQVLDDIIDVTQD 236 >gi|271499581|ref|YP_003332606.1| polyprenyl synthetase [Dickeya dadantii Ech586] gi|270343136|gb|ACZ75901.1| Polyprenyl synthetase [Dickeya dadantii Ech586] Length = 303 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 87/234 (37%), Positives = 130/234 (55%), Gaps = 16/234 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 +L + +RID L+ + S + Q + + + ALLGGK++R FLV LF V Sbjct: 7 QLAAHHQRIDAALNHFI----STLPFQSSPLVEAMAHGALLGGKRLRPFLVYTTGQLFAV 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ L T A Sbjct: 63 SPDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILAGDALQTLA 122 Query: 128 FEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 F I++ +P + D R ++ L G+ GM GGQ LD+ E +D + I + K Sbjct: 123 FSILADAPMPHVSDRDRLAMISELASASGVAGMCGGQALDLAAEGHQVDLQTLERIHRHK 182 Query: 185 TGALMCFACESGAIMAHASQNEKERLRC-----FGENLGIIFQLADDLLDCEED 233 TGAL+ + GA+ A E+ RL + +G+ FQ+ DD+LD D Sbjct: 183 TGALIRASVRLGALAA----GERGRLALPYLDRYANAVGLAFQVQDDILDVIGD 232 >gi|170719766|ref|YP_001747454.1| polyprenyl synthetase [Pseudomonas putida W619] gi|169757769|gb|ACA71085.1| Polyprenyl synthetase [Pseudomonas putida W619] Length = 295 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 77/227 (33%), Positives = 127/227 (55%), Gaps = 10/227 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 + R+D L+ L + T+ +RL +A+RY+++ GGK++R L Sbjct: 9 SQARVDAALEPLFIAP-----TKELERLYAAMRYSVMNGGKRVRPLLAYAACQALGAPAE 63 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 64 QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSA 123 Query: 131 ISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGA 187 + P+ + D IR ++ +L G GM+ GQ +D+ + D+ + + + KTGA Sbjct: 124 LLDPRLSPQPDAIRLAMVQALAKAAGPAGMVAGQAIDLGSVGVKLDQQALEFMHRHKTGA 183 Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ + GA+ + A Q + + L+ + + +G+ FQ+ DD+LD E D Sbjct: 184 LIEASVRLGALASGRAEQAQLDALQTYAQAIGLAFQVQDDILDVESD 230 >gi|118475576|ref|YP_891278.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40] gi|118414802|gb|ABK83222.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40] Length = 277 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 120/215 (55%), Gaps = 8/215 (3%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIE 80 +L L ND L ++ GGK R+ L+ + +A V AA+E Sbjct: 8 ELNLPKVDSFHPHFNDSLSWVLK---AGGKHFRAKLLLGVVDALKPDLKSASYPVAAAVE 64 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H YSLIHDDLP MDN +RRG T+H++YDEV+A++AG+ L T+AF ++SS L Sbjct: 65 MLHTYSLIHDDLPCMDNADLRRGVATLHVKYDEVSAVLAGDALNTHAFYMLSS--ANLPA 122 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 + + +L N G+ GM+ GQ +D +++ ++ ++ + KTGAL+ + + GAI Sbjct: 123 EAVVKCVQTLAENGGIYGMVIGQAIDCYFENKHLNLDELKFLHLHKTGALIAASMKMGAI 182 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ S + E++ G LG+ FQ+ DD++D D Sbjct: 183 ISAQSDKQCEKIYNIGLKLGLAFQIHDDIIDATSD 217 >gi|307637619|gb|ADN80069.1| Octa prenyl-diphosphate synthase/Dimethyl allyl transferase/Geranyl trans transferase /farnesyl diphosphate synthase/Geranyl geranyl pyrophosphate synthetase [Helicobacter pylori 908] gi|325996213|gb|ADZ51618.1| Octaprenyl-diphosphate synthase/Dimethylallyltransferase/Geranyltranstransferas e/farnesyldiphosphate synthase/Geranylgeranyl pyrophosphate synthetase [Helicobacter pylori 2018] gi|325997807|gb|ADZ50015.1| Geranyltranstransferase [Helicobacter pylori 2017] Length = 303 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 69/194 (35%), Positives = 115/194 (59%), Gaps = 11/194 (5%) Query: 49 GGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK+ R FL CA + ++ ++ +IEC+H YSLIHDDLP MDN +RR Sbjct: 45 GGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNASLRR 104 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 PT+H +YDE TA++ G+ L TY+FE++S+ + L+ I +L+ L+ N G++GM+ G Sbjct: 105 NHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESRIIVELVKILSANGGIKGMILG 162 Query: 163 QMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGI 219 Q LD ++ ++ Q+ + + KT L+ + G + + + E + L+ FG +G+ Sbjct: 163 QALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASGINDEELLKWLQAFGLKMGL 222 Query: 220 IFQLADDLLDCEED 233 FQ+ DD++D +D Sbjct: 223 CFQVLDDIIDVTQD 236 >gi|83746515|ref|ZP_00943566.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Ralstonia solanacearum UW551] gi|207743826|ref|YP_002260218.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum IPO1609] gi|83726846|gb|EAP73973.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Ralstonia solanacearum UW551] gi|206595226|emb|CAQ62153.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum IPO1609] Length = 299 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 117/204 (57%), Gaps = 14/204 (6%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+RYA LG GK++R LV +L + RV A+E IH YSL+HDD+P MD Sbjct: 32 RLHAAMRYATLGAGKRVRPLLVHAAGALGEASPEALDRVSCAVEMIHAYSLVHDDMPCMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151 + +RRG+PTVH YDE TA++ G+ L T AF +++ SP T R+ L+ L Sbjct: 92 DDDLRRGRPTVHRAYDEATALLVGDALQTQAFVVLAELGAVSPVT------RAALVGELA 145 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G GM GGQ +D+Q + +Q + + +MKTGAL+ + GA+ A + E+ Sbjct: 146 RASGSLGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNAAALEQ 205 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD D Sbjct: 206 VDAYAGAVGLAFQVVDDILDVTAD 229 >gi|308062245|gb|ADO04133.1| geranyltranstransferase [Helicobacter pylori Cuz20] Length = 303 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNRQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQDFGLKMGLCFQVLDDIIDVTQD 236 >gi|329667056|gb|AEB93004.1| geranyltranstransferase [Lactobacillus johnsonii DPC 6026] Length = 288 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/235 (35%), Positives = 126/235 (53%), Gaps = 21/235 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLF 65 KL++ ++ +D+ L + H+ T+ ++ S I Y+++ GGK++R L A+L Sbjct: 2 KLKDFQEKYTPQIDNFLKE---HLVTEIDNPTFSKIMSYSVMAGGKRLRPLLF--LATLE 56 Query: 66 NVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +NH LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+G Sbjct: 57 TLNHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDG 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMI 180 LL + I+ + L + ++ +G GM+GGQ LDI D + MI Sbjct: 117 LLPLGIQWITEGSNS------AALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKMI 170 Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +M KTG L+ + AI A A+ +E RL F + G +Q+ DDL+D E Sbjct: 171 DQMEWLKTGCLIEASVRMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVE 225 >gi|194432565|ref|ZP_03064851.1| geranyltranstransferase [Shigella dysenteriae 1012] gi|194419126|gb|EDX35209.1| geranyltranstransferase [Shigella dysenteriae 1012] gi|332086043|gb|EGI91207.1| geranyltranstransferase [Shigella dysenteriae 155-74] gi|332094575|gb|EGI99621.1| geranyltranstransferase [Shigella boydii 5216-82] Length = 299 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDSDMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|283781730|ref|YP_003372485.1| polyprenyl synthetase [Pirellula staleyi DSM 6068] gi|283440183|gb|ADB18625.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068] Length = 296 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/230 (36%), Positives = 127/230 (55%), Gaps = 6/230 (2%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65 + +E SK + + +DD L+ T + L AIR++LL K++R LV Sbjct: 5 ADFRELSKTLRSEVDDALVATTEY-GPDVPTHLAEAIRHSLLAPAKRLRPLLVLIACEAC 63 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + A+ A+E IH YSLIHDDLP+MD+ +RRG+P+ H ++ E T I+AG+ LL Sbjct: 64 GYDRSKAMPAAVAVELIHTYSLIHDDLPAMDDDDMRRGRPSCHAKFGESTGILAGDALLA 123 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKM 183 AFE++++ L + ++ + L G ++GGQ D+ EF D + I + Sbjct: 124 QAFEVLAA--DHLPGPVVAKCVKELAVAAGAANLVGGQHDDLGAEFADLGLASLEAIHRR 181 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGA++C + GAI+A AS L +GE LG+ FQ+ DDLLD E D Sbjct: 182 KTGAMICVSLRLGAIIAGASSEVLTALSQYGERLGLAFQIVDDLLDLEGD 231 >gi|51595290|ref|YP_069481.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 32953] gi|153948033|ref|YP_001402071.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758] gi|186894307|ref|YP_001871419.1| geranyltranstransferase [Yersinia pseudotuberculosis PB1/+] gi|51588572|emb|CAH20180.1| geranyltranstransferase (farnesyldiphosphate synthase) [Yersinia pseudotuberculosis IP 32953] gi|152959528|gb|ABS46989.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758] gi|186697333|gb|ACC87962.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+] Length = 306 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 119/203 (58%), Gaps = 5/203 (2%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L+ A+RY A++GGK++R +LV +F ++ AAIECIH YSLIHDDLP+ Sbjct: 36 NSNLIEAMRYGAVIGGKRLRPYLVYATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPA 95 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153 MD+ +RRG+PT H+++ E AI+AG+ L T AF I++ +P + D R +++ L Sbjct: 96 MDDDDLRRGQPTCHVKFGEAHAILAGDALQTLAFSILAEAPMPDVADKDRLSMIIELAQA 155 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210 G GM GQ LD++ E + + I + KTGAL+ A GA+ A A + L Sbjct: 156 SGAAGMCAGQALDLEAETRPVLLGDLEQIHRHKTGALIRAAVRLGALAAGEAGRKTLLSL 215 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + E +G+ FQ+ DD+LD D Sbjct: 216 DRYAEAIGLAFQVQDDILDVIGD 238 >gi|289672640|ref|ZP_06493530.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae FF5] Length = 295 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ LD L ++ RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALDGLFKAPGPELE-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + HA Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230 >gi|160871987|ref|ZP_02062119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Rickettsiella grylli] gi|159120786|gb|EDP46124.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Rickettsiella grylli] Length = 294 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 9/199 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ YA+L GGK++R V ++ ++ + AIE IH YSLIHDDLP MDN Sbjct: 30 LYDAMIYAVLNGGKRLRPLYVYTLGNVLGLSLQDLDHIACAIEFIHAYSLIHDDLPCMDN 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGL 156 RRGKP+ H Q+ E A++AG+ L AF+ ++ +P LK +++ LT +G Sbjct: 90 DDWRRGKPSCHKQFGEAMALLAGDALQALAFDTLLKAPFQSLK---VIKMLSVLTEAVGA 146 Query: 157 QGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 QGM+ GQ +D +D D + I +KTG+L A + AI A Q+ L+ Sbjct: 147 QGMVAGQAMDFKDFNALGRSDRSNAENIHALKTGSLFGAAFQLPAIAADLPQDHSLTLKN 206 Query: 213 FGENLGIIFQLADDLLDCE 231 G +G++FQ+ DD+ D E Sbjct: 207 VGHQVGLVFQIQDDICDDE 225 >gi|20803894|emb|CAD31472.1| PROBABLE FARNESYL-DIPHOSPHATE SYNTHASE PROTEIN [Mesorhizobium loti R7A] Length = 324 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/241 (32%), Positives = 129/241 (53%), Gaps = 16/241 (6%) Query: 2 NGGLPSK--LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58 +G LP + +Q+ ++R++ L LL + L++A+RYA L GGK+ R+ L Sbjct: 20 SGRLPPEIWMQDGARRVEQALARLLCA-----EDDGETELMAAMRYATLHGGKRTRALLC 74 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 +L + VGAAIE +H +L+HDDLP+MD+ +RRG PTVH+++ E TAI+ Sbjct: 75 LATGALADTPAPMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAIL 134 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 G+ L +AF ++S DN R L+ L + +G GGQ +D+ + ++ + Sbjct: 135 VGDALQAHAFLTLASLDAP-GDN-RIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDR 192 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEE 232 + + +MK+GAL+ + GA+ A A L C + G+ Q+ DD+LD Sbjct: 193 IVAMHRMKSGALVRASVRMGALCAIAEDAAHAALYCALDRYSACFGLALQVVDDILDATA 252 Query: 233 D 233 D Sbjct: 253 D 253 >gi|94990756|ref|YP_598856.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus pyogenes MGAS10270] gi|94544264|gb|ABF34312.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus pyogenes MGAS10270] Length = 290 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L+ AI Y++ GGK+IR ++ E F V+ A + AA+E IH SLIHDDLP Sbjct: 23 SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Q+ E TAI+AG+ L F +I+ + +L ++ L+ L+ Sbjct: 83 AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + Q+ +I KTG L+ F ++ A++ + +++L Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200 Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237 G +G FQ+ DD+LD EDL PKK Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232 >gi|66043872|ref|YP_233713.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a] gi|63254579|gb|AAY35675.1| Polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a] gi|330971592|gb|EGH71658.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 295 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ LD L ++ RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALDGLFKAPGPELE-----RLYQAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + HA Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230 >gi|320528396|ref|ZP_08029558.1| putative geranyltranstransferase [Solobacterium moorei F0204] gi|320131310|gb|EFW23878.1| putative geranyltranstransferase [Solobacterium moorei F0204] Length = 278 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/194 (39%), Positives = 110/194 (56%), Gaps = 6/194 (3%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 SA+ Y+L GGK+IR L+ ++V+ A+E IH YSLIHDDLP+MDN Sbjct: 21 SAMLYSLTAGGKRIRPQLLYTVLKGYSVDPEIGNPFACALEMIHTYSLIHDDLPAMDNDD 80 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG PT H Q++E TAI+AG+GLLTYAFEI + ++ +LS G GM Sbjct: 81 LRRGLPTCHKQFNEATAILAGDGLLTYAFEIAAGSNENSGTVLKCISILS--KMAGPSGM 138 Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 + GQ LD++ E+ ID + I + KTG L+ +A + + + G +L Sbjct: 139 VYGQQLDLEAEYKEIDWDMLQRIHEHKTGCLLTAPLLIACTLAK-HEEDISAWKKIGFSL 197 Query: 218 GIIFQLADDLLDCE 231 G+ FQ+ DD+LD E Sbjct: 198 GLAFQIQDDILDIE 211 >gi|227890284|ref|ZP_04008089.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200] gi|227849098|gb|EEJ59184.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200] Length = 288 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/235 (35%), Positives = 127/235 (54%), Gaps = 21/235 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLF 65 KL++ ++ +D+ L + H+ T+ ++ S I Y+++ GGK++R L A+L Sbjct: 2 KLKDFQEKYTPQIDNFLKE---HLVTEIDNLTFSKIMSYSVMAGGKRLRPLLF--LATLE 56 Query: 66 NVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +NH LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+G Sbjct: 57 TLNHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDG 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMI 180 LL + I+ + L + ++ +G GM+GGQ LDI D + MI Sbjct: 117 LLPLGIQWITEGSNS------AALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKMI 170 Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +M KTG L+ + + AI A A+ +E RL F + G +Q+ DDL+D E Sbjct: 171 DQMEWLKTGCLIEASVKMAAIYAGATDSEFNRLDNFSKRFGRSYQIYDDLVDVVE 225 >gi|121593453|ref|YP_985349.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42] gi|120605533|gb|ABM41273.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42] Length = 311 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/195 (37%), Positives = 114/195 (58%), Gaps = 4/195 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV + ALR A+E IH YSL+HDD+P MDN + Sbjct: 52 AMRYAVLDGGKRLRPLLVLAASHAVGGQPEAALRAACAVELIHAYSLVHDDMPCMDNDVM 111 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH+++ E A++AG+ L AFE++ +P+ + ++++L L G GM Sbjct: 112 RRGKPTVHVRFGEARALLAGDALQALAFELL-TPEDGVPLAMQARLCRELAQAAGAAGMA 170 Query: 161 GGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQ +D+ + E Q+ + +KTGAL+ + GA+ + + L +G +G Sbjct: 171 GGQAIDLASVGLQLSEDQLRHMHSLKTGALLQASVVMGAVCGQPTGAALQALTDYGAAMG 230 Query: 219 IIFQLADDLLDCEED 233 + FQ+ DD+LD +D Sbjct: 231 LAFQVVDDVLDVTQD 245 >gi|50914597|ref|YP_060569.1| dimethylallyltransferase [Streptococcus pyogenes MGAS10394] gi|50903671|gb|AAT87386.1| Dimethylallyltransferase [Streptococcus pyogenes MGAS10394] Length = 290 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L+ AI Y++ GGK+IR ++ E F V+ A + AA+E IH SLIHDDLP Sbjct: 23 SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Q+ E TAI+AG+ L F +I+ + +L ++ L+ L+ Sbjct: 83 AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + Q+ +I KTG L+ F ++ A++ + +++L Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200 Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237 G +G FQ+ DD+LD EDL PKK Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232 >gi|331002440|ref|ZP_08325958.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410256|gb|EGG89690.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon 107 str. F0167] Length = 296 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 83/235 (35%), Positives = 127/235 (54%), Gaps = 17/235 (7%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 +E K+ID+I++ + + N ++++A A+ GGK++R ++ E Sbjct: 3 KEKIKKIDSIIESFF-----YAEDGLNKKVITASNEAIKNGGKRLRPLIMFEIYRAVAGE 57 Query: 69 HLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + AAIE IH +SLIHDDLP+MDN +RRGKPT + Y E AI+AG+ L Sbjct: 58 EYREEIIAPFLAAIEMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLCV 117 Query: 126 YAFEIISSPKTQLKDNIR-----SQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVF 178 AFEIIS K Q D+I S+ + +L + G GM+GGQ +D++ + + E + Sbjct: 118 QAFEIISK-KMQDVDDINILKRMSKALYTLANATGALGMIGGQCVDVEYCGKRMSEDVLR 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++KTGAL+ + G I+A A+ E L+ G +G FQ+ DD LD D Sbjct: 177 YTYELKTGALLQASFVIGGILAGANDKETRLLKKAGSYIGEAFQIRDDYLDIVAD 231 >gi|71903832|ref|YP_280635.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180] gi|94994734|ref|YP_602832.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus pyogenes MGAS10750] gi|71802927|gb|AAX72280.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180] gi|94548242|gb|ABF38288.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus pyogenes MGAS10750] Length = 290 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L+ AI Y++ GGK+IR ++ E F V+ A + AA+E IH SLIHDDLP Sbjct: 23 SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Q+ E TAI+AG+ L F +I+ + +L ++ L+ L+ Sbjct: 83 AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + Q+ +I KTG L+ F ++ A++ + +++L Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200 Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237 G +G FQ+ DD+LD EDL PKK Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232 >gi|169824537|ref|YP_001692148.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328] gi|167831342|dbj|BAG08258.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328] Length = 269 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 6/202 (2%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 ND++ A++Y L+ G K++R L +FN + + +IE IH YSL+HDDL Sbjct: 21 NDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNESISEPMNYALSIELIHNYSLVHDDLE 80 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MDN RRGK TVH +Y E A++ G+ LL Y+FE++S +K+ + + + Sbjct: 81 CMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYSFEVLSES---IKNEVDAMCANYIVKK 137 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G GM+ GQ+LDI D I E + I KT L+ + S I++ +L + Sbjct: 138 SGCFGMIRGQLLDI-DSKISEDNIIEIYDKKTCNLLKASTVSAGILSKVDHTTLLKLENY 196 Query: 214 GENLGIIFQLADDLLDCEEDLP 235 NLG+ FQ+ DD++D E D+ Sbjct: 197 AFNLGMAFQIIDDIMDYENDIK 218 >gi|330899928|gb|EGH31347.1| polyprenyl synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 281 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ LD L ++ RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALDGLFKAPGPELE-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + HA Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230 >gi|330939927|gb|EGH43133.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B] Length = 295 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ LD L ++ RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALDGLFKAPGPELE-----RLYQAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLTPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + HA Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230 >gi|293408568|ref|ZP_06652407.1| geranyltranstransferase [Escherichia coli B354] gi|291471746|gb|EFF14229.1| geranyltranstransferase [Escherichia coli B354] Length = 299 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 85/210 (40%), Positives = 120/210 (57%), Gaps = 17/210 (8%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSL 150 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S PK +D I ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPKVSDRDRI--SMISEL 145 Query: 151 THNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K Sbjct: 146 ASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKG 201 Query: 209 R-----LRCFGENLGIIFQLADDLLDCEED 233 R L + E++G+ FQ+ DD+LD D Sbjct: 202 RRALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|120602763|ref|YP_967163.1| polyprenyl synthetase [Desulfovibrio vulgaris DP4] gi|120562992|gb|ABM28736.1| farnesyl-diphosphate synthase [Desulfovibrio vulgaris DP4] gi|311233551|gb|ADP86405.1| Farnesyltranstransferase [Desulfovibrio vulgaris RCH1] Length = 299 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 122/196 (62%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL SA+ Y+LL GGK++R L A + ++ ++ + AAIE IH YSLIHDDLP+MD Sbjct: 34 RLQSAMEYSLLAGGKRLRPVLCLSTAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPAMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+P+ H Q+DE TAI+AG+GLLT AF++++S + + ++ G Sbjct: 94 DDDLRRGRPSNHRQFDEATAILAGDGLLTDAFDLMASVGGGIPAGHVLAALREVSSAAGS 153 Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+GGQ LD+ + ID + + MKTGAL+ +C +GA++ A + E++ + Sbjct: 154 SGMVGGQALDMDYTGRDDIDLAALRTMHAMKTGALIRCSCVAGALLGGAPASAVEQVAGY 213 Query: 214 GENLGIIFQLADDLLD 229 G +G FQ+ DD+LD Sbjct: 214 GAAIGAAFQIVDDILD 229 >gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 299 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 130/235 (55%), Gaps = 19/235 (8%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-- 68 + K+I+ L+ +L + + + Q A+RY++ GGK++R L + + + Sbjct: 13 SQKKIEEHLEKILKERSPEIIYQ-------AMRYSVFAGGKRLRPLLCLLSYQMLSKDQE 65 Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E AI+AG+ LL A Sbjct: 66 INQKVLDIASAIELIHTYSLIHDDLPAMDNDILRRGKPTNHVVFGEAIAILAGDALLNLA 125 Query: 128 FEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQ 181 E+ + K+ +++ L G++GM+GGQ++DI + D E +F + Sbjct: 126 AEVCMDWILRYGCDKNLVKAAKYLFWAS--GVEGMIGGQVIDITNSGQDIKSEELLFEMH 183 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT L+ +C GA++A A + L +G+NLG+ FQ+ DD+LD D K Sbjct: 184 LKKTSRLIQASCVCGALVAGAEDDVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKK 238 >gi|302380702|ref|ZP_07269167.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3] gi|302311645|gb|EFK93661.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3] Length = 269 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 6/202 (2%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 ND++ A++Y L+ G K++R L +FN + + +IE IH YSL+HDDL Sbjct: 21 NDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNESISEPMNYALSIELIHNYSLVHDDLE 80 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MDN RRGK TVH +Y E A++ G+ LL Y+FE++S +K+ + + + Sbjct: 81 CMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYSFEVLSES---IKNEVDAMCANYIVKK 137 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G GM+ GQ+LDI D I E + I KT L+ + S I++ +L + Sbjct: 138 SGCFGMIRGQLLDI-DSKISEDNIIEIYDKKTCNLLKASTVSAGILSKVDHTTLLKLENY 196 Query: 214 GENLGIIFQLADDLLDCEEDLP 235 NLG+ FQ+ DD++D E D+ Sbjct: 197 AFNLGMAFQIIDDIMDYENDIK 218 >gi|170717621|ref|YP_001784702.1| polyprenyl synthetase [Haemophilus somnus 2336] gi|168825750|gb|ACA31121.1| Polyprenyl synthetase [Haemophilus somnus 2336] Length = 296 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 87/228 (38%), Positives = 128/228 (56%), Gaps = 11/228 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 LQE+ +RI+ L+ L A++Y LL GGK+IR FLV + Sbjct: 8 LQESKQRIN-----FFLEKQFECIDSSPSPLAEAMKYGLLLGGKRIRPFLVYATGKMLGA 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N + AAIE IH YSLIHDDLP+MDN +RRG PT HI +D TAI+AG+ L +A Sbjct: 63 NLIQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDALQPFA 122 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKT 185 FE+++ L + L+ +L + G++GM GQ LD+ +++ I+ + + I + KT Sbjct: 123 FELLTQ-TPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIHRNKT 181 Query: 186 GALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCE 231 GAL+ A + G I + N K E+L + +G+ FQ+ DD+LD E Sbjct: 182 GALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIE 229 >gi|113461047|ref|YP_719114.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT] gi|112823090|gb|ABI25179.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT] Length = 296 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 87/228 (38%), Positives = 128/228 (56%), Gaps = 11/228 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 LQE+ +RI+ L+ L A++Y LL GGK+IR FLV + Sbjct: 8 LQESKQRIN-----FFLEKQFECIDSSPSPLAEAMKYGLLLGGKRIRPFLVYATGKMLGA 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N + AAIE IH YSLIHDDLP+MDN +RRG PT HI +D TAI+AG+ L +A Sbjct: 63 NLIQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDALQPFA 122 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKT 185 FE+++ L + L+ +L + G++GM GQ LD+ +++ I+ + + I + KT Sbjct: 123 FELLTQ-TPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIHRNKT 181 Query: 186 GALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCE 231 GAL+ A + G I + N K E+L + +G+ FQ+ DD+LD E Sbjct: 182 GALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIE 229 >gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus] Length = 359 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 11/225 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 ++E ++R++ LD + Q + ++RY+LL GGK++R L L Sbjct: 72 MKEKAERVNRALDAAVAQREPRW-------IHESMRYSLLAGGKRVRPLLCIASCELVGG 124 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + TA+ A E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+ LL A Sbjct: 125 DERTAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLALA 184 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---K 184 FE +++ + + ++ IG +G++GGQ++DI E + E V ++ + K Sbjct: 185 FEHVAAATEGVAPERVVRAVVEFGRYIGSEGLVGGQVVDIHSEGLAEVGVEQLEYIHLHK 244 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T AL+ A GAI+ A E+LR F +G++FQ+ DD+LD Sbjct: 245 TAALLEAAVVMGAILGGADDEAVEKLRKFARCIGLLFQVVDDILD 289 >gi|329908093|ref|ZP_08274828.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium IMCC9480] gi|327546763|gb|EGF31699.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium IMCC9480] Length = 294 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 8/201 (3%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+RYA+L GGK++R LV A LF+ R +A+E IH YSL+HDD+P MD Sbjct: 32 RLHAAMRYAVLDGGKRVRPLLVQAAAELFDAAPANVARAASAVEMIHAYSLVHDDMPCMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IG 155 + +RRGKPTVH+ YDE TA++ G+ L AF +++ + R+ ML L + G Sbjct: 92 DDALRRGKPTVHVAYDEATALLVGDALQAQAFFVLAGMDIE---PARAVAMLRLLADAAG 148 Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRC 212 GM GGQ +D+ +D + ++ + ++KTGAL+ + GA L Sbjct: 149 SIGMCGGQAIDLASVGMDLSLAELEQMHRLKTGALLRASVLLGAWCGTTPDAAATAALEA 208 Query: 213 FGENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD D Sbjct: 209 YAAAIGLAFQVIDDVLDATAD 229 >gi|56808396|ref|ZP_00366148.1| COG0142: Geranylgeranyl pyrophosphate synthase [Streptococcus pyogenes M49 591] Length = 290 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L+ AI Y++ GGK+IR ++ E F V+ A + AA+E IH SLIHDDLP Sbjct: 23 SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Q+ E TAI+AG+ L F +I+ + +L ++ L+ L+ Sbjct: 83 AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + Q+ +I KTG L+ F ++ A++ + +++L Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200 Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237 G +G FQ+ DD+LD EDL PKK Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232 >gi|109947621|ref|YP_664849.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba] gi|109714842|emb|CAJ99850.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba] Length = 303 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 124/216 (57%), Gaps = 17/216 (7%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASLFNVNHLTA----LRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++L ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYLNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +Y+E +A++ G+ L TY+FE++S+ L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYNETSAVLIGDALNTYSFELLSN--ASLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + Sbjct: 144 VELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLVSASLIMGLV--- 200 Query: 202 ASQNEKER----LRCFGENLGIIFQLADDLLDCEED 233 AS N+ E L+ FG +G+ FQ+ DD++D +D Sbjct: 201 ASGNKDEELSKWLQDFGLKIGLCFQVLDDIIDVTQD 236 >gi|94988855|ref|YP_596956.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429] gi|94992746|ref|YP_600845.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus pyogenes MGAS2096] gi|94542363|gb|ABF32412.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429] gi|94546254|gb|ABF36301.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus pyogenes MGAS2096] Length = 290 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L+ AI Y++ GGK+IR ++ E F V+ A + AA+E IH SLIHDDLP Sbjct: 23 SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Q+ E TAI+AG+ L F +I+ + +L ++ L+ L+ Sbjct: 83 AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + Q+ +I KTG L+ F ++ A++ + +++L Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200 Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237 G +G FQ+ DD+LD EDL PKK Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232 >gi|88799582|ref|ZP_01115158.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Reinekea sp. MED297] gi|88777667|gb|EAR08866.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Reinekea sp. MED297] Length = 293 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 122/200 (61%), Gaps = 7/200 (3%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 +D L SAI Y+LL GGK++R LV + L L A+E IH YSL+HDDLP+ Sbjct: 27 SDELTSAIHYSLLNGGKRLRPSLVRAASDLVRAPDGLWLIPAQALEMIHVYSLVHDDLPA 86 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRGKPT H Q+ E TAI+AG+ L + AF +I+ + IR + L L + Sbjct: 87 MDDDDLRRGKPTCHRQFSEATAILAGDALQSEAFALIAGAEALSPRQIRDMVRL-LAQSA 145 Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERL 210 G +GM+GGQM+D+ E + ++ + ++KTGAL+ + + GA + H S + + RL Sbjct: 146 GARGMVGGQMIDLASEQKTLTLNELSDLHRLKTGALISASLQLGA-LCHDSVDVEILARL 204 Query: 211 RCFGENLGIIFQLADDLLDC 230 +G+ +G+ FQ+ADD+LD Sbjct: 205 ARYGDAIGLAFQIADDILDV 224 >gi|320173761|gb|EFW48944.1| geranyltranstransferase [Shigella dysenteriae CDC 74-1112] Length = 299 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLNALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|317180223|dbj|BAJ58009.1| geranyltranstransferase [Helicobacter pylori F32] Length = 303 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ L+ I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESRII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG +G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQDFGLKMGLCFQVLDDIIDVTQD 236 >gi|152991761|ref|YP_001357482.1| geranyltranstransferase [Sulfurovum sp. NBC37-1] gi|151423622|dbj|BAF71125.1| geranyltranstransferase [Sulfurovum sp. NBC37-1] Length = 284 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 115/186 (61%), Gaps = 9/186 (4%) Query: 49 GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R L+ + + + +AL V A+E H YSLIHDDLP+MD+ +RRG T+ Sbjct: 33 GGKRFRPMLLLSIVDTYEPMLYDSALPVALALEMFHTYSLIHDDLPAMDDADLRRGHQTL 92 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++DEVTAI+AG+ L + AF +I+ K L+++++ +L+ L + G +GM+ GQ +D Sbjct: 93 HKRFDEVTAILAGDALNSDAFYLIA--KAPLREDVKIKLVELLARDGGSRGMVLGQAIDC 150 Query: 168 QDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 E IDE +V + KT L+ + + GA++ + + ++ L FG +LG++FQ+ Sbjct: 151 YFENRPLTIDEVKV--LHTNKTAKLIAVSLQMGAVIVRLAPDVQKALYDFGIDLGLLFQI 208 Query: 224 ADDLLD 229 DD++D Sbjct: 209 QDDIID 214 >gi|88193100|pdb|2FOR|A Chain A, Crystal Structure Of The Shigella Flexneri Farnesyl Pyrophosphate Synthase Complex With An Isopentenyl Pyrophosphate gi|88193101|pdb|2FOR|B Chain B, Crystal Structure Of The Shigella Flexneri Farnesyl Pyrophosphate Synthase Complex With An Isopentenyl Pyrophosphate Length = 323 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 52 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 111 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 112 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELAS 171 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 172 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 227 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 228 ALPVLDKYAESIGLAFQVQDDILDVVGD 255 >gi|223043139|ref|ZP_03613186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Staphylococcus capitis SK14] gi|222443350|gb|EEE49448.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Staphylococcus capitis SK14] Length = 288 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 82/210 (39%), Positives = 124/210 (59%), Gaps = 6/210 (2%) Query: 29 SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 SH+ T + ++ +++ GGK+IR L+ ++ N ++ + A+E IH YSLI Sbjct: 19 SHLNTDLEESMMYSLQ---AGGKRIRPVLLLLTLNMLNEDYHKGFQSALALEMIHTYSLI 75 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MD+ RRGK T H Y E AI+AG+ LLT AFE++S+ ++DN++ +++ Sbjct: 76 HDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDDL-IEDNVKVKVLQ 134 Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L+ G GM+GGQ LD+Q E +D + I K KTGAL+ FA + +A Q Sbjct: 135 RLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIHKAKTGALLTFAVMAAVDIAQVDQKT 194 Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L F ++LG++FQ+ DDLLD D K Sbjct: 195 SHNLNEFSKHLGLMFQIKDDLLDVYGDEKK 224 >gi|21910690|ref|NP_664958.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315] gi|28895620|ref|NP_801970.1| geranyltranstransferase (farnesyl diphosphate synthase) [Streptococcus pyogenes SSI-1] gi|21904893|gb|AAM79761.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315] gi|28810869|dbj|BAC63803.1| putative geranyltranstransferase (farnesyl diphosphate synthase) [Streptococcus pyogenes SSI-1] Length = 290 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L+ AI Y++ GGK+IR ++ E F V+ A + AA+E IH SLIHDDLP Sbjct: 23 SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Q+ E TAI+AG+ L F +I+ + +L ++ L+ L+ Sbjct: 83 AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + Q+ +I KTG L+ F ++ A++ + +++L Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTDQAITVRQQLE 200 Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237 G +G FQ+ DD+LD EDL PKK Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232 >gi|330951508|gb|EGH51768.1| polyprenyl synthetase [Pseudomonas syringae Cit 7] Length = 295 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ LD L ++ RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALDALFKAPGPELE-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAGLEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + HA Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230 >gi|307129906|ref|YP_003881922.1| geranyltranstransferase [Dickeya dadantii 3937] gi|306527435|gb|ADM97365.1| geranyltranstransferase [Dickeya dadantii 3937] Length = 303 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 84/230 (36%), Positives = 130/230 (56%), Gaps = 16/230 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 +L + +RI+ L+ + S + Q + + + ALLGGK++R FLV LF + Sbjct: 7 QLTAHHQRINATLNQFI----STLPFQSSPLVEAMAHGALLGGKRLRPFLVYTTGQLFGI 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AA+ECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ L T A Sbjct: 63 SQNNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILAGDALQTLA 122 Query: 128 FEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 F I++ +P ++ D R ++ L G+ GM GGQ LD++ E +D + I + K Sbjct: 123 FSILADAPMPEVSDRDRLAMISELASASGVAGMCGGQALDLEAEGHQVDLLALERIHRHK 182 Query: 185 TGALMCFACESGAIMAHASQNEKERLRC-----FGENLGIIFQLADDLLD 229 TGAL+ + GA+ A E+ RL + +G+ FQ+ DD+LD Sbjct: 183 TGALIRASVRLGALAA----GERGRLALPCLDRYANAVGLAFQVQDDILD 228 >gi|207091726|ref|ZP_03239513.1| geranyltranstransferase [Helicobacter pylori HPKX_438_AG0C1] gi|207108226|ref|ZP_03242388.1| geranyltranstransferase [Helicobacter pylori HPKX_438_CA4C1] Length = 303 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/194 (35%), Positives = 113/194 (58%), Gaps = 11/194 (5%) Query: 49 GGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK+ R FL CA + ++ ++ +IEC+H YSLIHDDLP MDN +RR Sbjct: 45 GGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNASLRR 104 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 PT+H +YDE TA++ G+ L TY+FE++S+ L+ +I +L+ L+ N G++GM+ G Sbjct: 105 NHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHIIVELVKILSANGGIKGMILG 162 Query: 163 QMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGI 219 Q LD ++ ++ Q+ + + KT L+ + G + + E + L+ FG G+ Sbjct: 163 QALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASGIKDEELFKWLQAFGLKTGL 222 Query: 220 IFQLADDLLDCEED 233 FQ+ DD++D +D Sbjct: 223 CFQVLDDIIDVTQD 236 >gi|115376388|ref|ZP_01463625.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1] gi|310822665|ref|YP_003955023.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1] gi|115366595|gb|EAU65593.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1] gi|309395737|gb|ADO73196.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1] Length = 297 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 84/208 (40%), Positives = 115/208 (55%), Gaps = 12/208 (5%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLP 93 RL A+RY+LL GGK++R L A + A V A+E IH YSL+HDDLP Sbjct: 36 RLAEAMRYSLLAGGKRLRPVLCLTFADTTSRQSTAAAPVEDAACAVEYIHTYSLVHDDLP 95 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 SMDN +RRG+PT H Y E A++AG+ LLT AF ++ S + +R L L Sbjct: 96 SMDNDDLRRGRPTNHKVYGEGMALLAGDALLTEAFALVGSG----PEPVRGLLCGELARA 151 Query: 154 IGLQGMLGGQMLDI-QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+GGQ+LD+ +D + + +MKTGAL+ AC G + A R Sbjct: 152 AGAAGMVGGQVLDVAEDRPAHLDYLVRLHRMKTGALLRAACRMGVLGAGGDAETLARATT 211 Query: 213 FGENLGIIFQLADDLLDC---EEDLPKK 237 +G+ +G+ FQ+ADD+LD EDL K Sbjct: 212 YGDAIGLAFQIADDILDVTATAEDLGKP 239 >gi|46579760|ref|YP_010568.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str. Hildenborough] gi|46449175|gb|AAS95827.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str. Hildenborough] Length = 287 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 122/196 (62%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL SA+ Y+LL GGK++R L A + ++ ++ + AAIE IH YSLIHDDLP+MD Sbjct: 22 RLQSAMEYSLLAGGKRLRPVLCLSTAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPAMD 81 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+P+ H Q+DE TAI+AG+GLLT AF++++S + + ++ G Sbjct: 82 DDDLRRGRPSNHRQFDEATAILAGDGLLTDAFDLMASVGGGIPAGHVLAALREVSSAAGS 141 Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+GGQ LD+ + ID + + MKTGAL+ +C +GA++ A + E++ + Sbjct: 142 SGMVGGQALDMDYTGRDDIDLAALRTMHAMKTGALIRCSCVAGALLGGAPASAVEQVAGY 201 Query: 214 GENLGIIFQLADDLLD 229 G +G FQ+ DD+LD Sbjct: 202 GAAIGAAFQIVDDILD 217 >gi|51892982|ref|YP_075673.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum IAM 14863] gi|51856671|dbj|BAD40829.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum IAM 14863] Length = 297 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/203 (38%), Positives = 116/203 (57%), Gaps = 9/203 (4%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL+ A+RY+LL GGK++R L + LF + + A+E IH YSLIHDDLP MD Sbjct: 32 RLVEAMRYSLLAGGKRLRPILTIAASELFGLEAADVMPGACALEMIHTYSLIHDDLPCMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDNIRSQLMLSLTH 152 + +RRG+PT H Y E A++AG+ LLT AF +++ P+ +R+ L+ Sbjct: 92 DDDLRRGRPTCHKVYGEAMAVLAGDALLTQAFALMAEQAAVPRVGPARAVRAAAELAHAA 151 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +GM+GGQ+ D+ E DE Q+ I +KTGAL A G I+A A + + +RL Sbjct: 152 GA--EGMVGGQVEDLAWEGRQADEPQLRRIHSLKTGALFRAAVRMGGILAGAGEEDLDRL 209 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + + G+ FQ+ DD+LD D Sbjct: 210 GRYATHFGLAFQIWDDVLDVTGD 232 >gi|24111799|ref|NP_706309.1| geranyltranstransferase [Shigella flexneri 2a str. 301] gi|30061915|ref|NP_836086.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T] gi|24050587|gb|AAN42016.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella flexneri 2a str. 301] gi|30040159|gb|AAP15892.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella flexneri 2a str. 2457T] gi|281599753|gb|ADA72737.1| Geranyltranstransferase [Shigella flexneri 2002017] gi|313646962|gb|EFS11419.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T] gi|332760701|gb|EGJ90989.1| geranyltranstransferase [Shigella flexneri 4343-70] gi|332761685|gb|EGJ91964.1| geranyltranstransferase [Shigella flexneri 2747-71] gi|332764298|gb|EGJ94534.1| geranyltranstransferase [Shigella flexneri K-671] gi|332768526|gb|EGJ98709.1| geranyltranstransferase [Shigella flexneri 2930-71] gi|333007813|gb|EGK27289.1| geranyltranstransferase [Shigella flexneri K-218] gi|333021995|gb|EGK41240.1| geranyltranstransferase [Shigella flexneri K-304] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|110804443|ref|YP_687963.1| geranyltranstransferase [Shigella flexneri 5 str. 8401] gi|110613991|gb|ABF02658.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella flexneri 5 str. 8401] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|318604611|emb|CBY26109.1| octaprenyl-diphosphate synthase; Dimethylallyltransferase; Geranyltranstransferase (farnesyldiphosphate synthase); Geranylgeranyl pyrophosphate synthetase [Yersinia enterocolitica subsp. palearctica Y11] Length = 306 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 123/204 (60%), Gaps = 7/204 (3%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLP 93 N L+ A+RY A+LGGK++R +LV +F ++ LT+L AAIECIH YSLIHDDLP Sbjct: 36 NSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGLS-LTSLDAPAAAIECIHAYSLIHDDLP 94 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG+PT H+++ E AI+AG+ L T AF I++ +P + D R ++ L H Sbjct: 95 AMDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEAPMPDVADKDRLSMIAELAH 154 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209 G+ GM GGQ LD+ E I + I + KTGAL+ A GA+ A A E Sbjct: 155 ASGVAGMCGGQALDLAAESRQITLDDLEKIHRHKTGALIRAAVRLGALAAGALGREALPL 214 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD D Sbjct: 215 LDRYANAIGLAFQVQDDILDVIGD 238 >gi|116629411|ref|YP_814583.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC 33323] gi|282850888|ref|ZP_06260262.1| polyprenyl synthetase [Lactobacillus gasseri 224-1] gi|116094993|gb|ABJ60145.1| farnesyl-diphosphate synthase [Lactobacillus gasseri ATCC 33323] gi|282557840|gb|EFB63428.1| polyprenyl synthetase [Lactobacillus gasseri 224-1] Length = 288 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 78/230 (33%), Positives = 127/230 (55%), Gaps = 25/230 (10%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL 70 + +ID L+D H+ ++ ++ + S I Y+++ GGK++R L A+L +N+ Sbjct: 11 TPQIDKFLED-------HLASEVDNPIFSKIMSYSVMAGGKRLRPLLF--LATLETLNYK 61 Query: 71 ---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL Sbjct: 62 ISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ--VFMIQK 182 + I+ + L + ++ +G GM+GGQ LDI ++ + E + ++ Sbjct: 122 IQWITEGSNS------AALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKENAKVIDQMEW 175 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTG L+ + + A+ A AS +E +RL F + G +Q+ DDL+D E Sbjct: 176 LKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVE 225 >gi|157155867|ref|YP_001461603.1| geranyltranstransferase [Escherichia coli E24377A] gi|157159942|ref|YP_001457260.1| geranyltranstransferase [Escherichia coli HS] gi|193065191|ref|ZP_03046264.1| geranyltranstransferase [Escherichia coli E22] gi|193068605|ref|ZP_03049566.1| geranyltranstransferase [Escherichia coli E110019] gi|194428795|ref|ZP_03061330.1| geranyltranstransferase [Escherichia coli B171] gi|218552984|ref|YP_002385897.1| geranyltranstransferase [Escherichia coli IAI1] gi|218693881|ref|YP_002401548.1| geranyltranstransferase [Escherichia coli 55989] gi|260842619|ref|YP_003220397.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009] gi|260853641|ref|YP_003227532.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368] gi|260866579|ref|YP_003232981.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128] gi|300818254|ref|ZP_07098465.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300820340|ref|ZP_07100492.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300903314|ref|ZP_07121242.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300924142|ref|ZP_07140134.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|301301569|ref|ZP_07207704.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|301330717|ref|ZP_07223319.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|307312204|ref|ZP_07591840.1| Polyprenyl synthetase [Escherichia coli W] gi|331666770|ref|ZP_08367644.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA271] gi|331676088|ref|ZP_08376800.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H591] gi|157065622|gb|ABV04877.1| geranyltranstransferase [Escherichia coli HS] gi|157077897|gb|ABV17605.1| geranyltranstransferase [Escherichia coli E24377A] gi|192927165|gb|EDV81786.1| geranyltranstransferase [Escherichia coli E22] gi|192957968|gb|EDV88410.1| geranyltranstransferase [Escherichia coli E110019] gi|194413098|gb|EDX29385.1| geranyltranstransferase [Escherichia coli B171] gi|218350613|emb|CAU96305.1| geranyltranstransferase [Escherichia coli 55989] gi|218359752|emb|CAQ97293.1| geranyltranstransferase [Escherichia coli IAI1] gi|257752290|dbj|BAI23792.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368] gi|257757766|dbj|BAI29263.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009] gi|257762935|dbj|BAI34430.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128] gi|300404609|gb|EFJ88147.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300419595|gb|EFK02906.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|300527125|gb|EFK48194.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300529145|gb|EFK50207.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300843066|gb|EFK70826.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|300843378|gb|EFK71138.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|306907706|gb|EFN38208.1| Polyprenyl synthetase [Escherichia coli W] gi|315059698|gb|ADT74025.1| geranyltranstransferase [Escherichia coli W] gi|315256246|gb|EFU36214.1| polyprenyl synthetase [Escherichia coli MS 85-1] gi|323152111|gb|EFZ38404.1| geranyltranstransferase [Escherichia coli EPECa14] gi|323160472|gb|EFZ46420.1| geranyltranstransferase [Escherichia coli E128010] gi|323178316|gb|EFZ63894.1| geranyltranstransferase [Escherichia coli 1180] gi|323379736|gb|ADX52004.1| Polyprenyl synthetase [Escherichia coli KO11] gi|323945322|gb|EGB41378.1| polyprenyl synthetase [Escherichia coli H120] gi|324116905|gb|EGC10818.1| polyprenyl synthetase [Escherichia coli E1167] gi|331065994|gb|EGI37878.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA271] gi|331076146|gb|EGI47428.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H591] gi|333010863|gb|EGK30289.1| geranyltranstransferase [Shigella flexneri K-272] gi|333021362|gb|EGK40615.1| geranyltranstransferase [Shigella flexneri K-227] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|325128970|gb|EGC51821.1| geranyltranstransferase [Neisseria meningitidis N1568] Length = 249 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/196 (39%), Positives = 116/196 (59%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT HI+Y E A++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHIKYGEANALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + + + + +KTGAL+ A GA+ + S++ L + L Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDAYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDC+ D Sbjct: 218 GLAFQVIDDVLDCDAD 233 >gi|300937031|ref|ZP_07151897.1| polyprenyl synthetase [Escherichia coli MS 21-1] gi|300457862|gb|EFK21355.1| polyprenyl synthetase [Escherichia coli MS 21-1] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLEALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|333008616|gb|EGK28084.1| geranyltranstransferase [Shigella flexneri VA-6] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|319787810|ref|YP_004147285.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317466322|gb|ADV28054.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 291 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/230 (37%), Positives = 122/230 (53%), Gaps = 12/230 (5%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64 P + R + LD LL T RL +A+R+A LGG K++R LV + Sbjct: 3 PEVFTRWAARTEATLDRLL-----PADTAEPRRLHAAMRHATLGGGKRMRPLLVYAAGTA 57 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + AA+E +H YSL+HDDLP+MD+ +RRG+PTVH+ +DE TAI+AG+ L Sbjct: 58 LGADEASLDLPAAAVELVHAYSLVHDDLPAMDDDDMRRGRPTVHVAFDEATAILAGDALQ 117 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183 T + +R+ M SL G GM GGQ LDI D + + +Q+M Sbjct: 118 T--LAFEALADAAAPAELRAGWMQSLARASGAGGMCGGQALDI-DATGSQLPLEALQRMH 174 Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 KTGAL+ A GA+ A A + +L + + LG+ FQ+ DDLLD E Sbjct: 175 SLKTGALIRAAVRMGALGAGADEARLRQLDRYADALGLAFQVRDDLLDIE 224 >gi|293418488|ref|ZP_06660923.1| geranyltranstransferase [Escherichia coli B088] gi|291325016|gb|EFE64431.1| geranyltranstransferase [Escherichia coli B088] gi|323184753|gb|EFZ70124.1| geranyltranstransferase [Escherichia coli 1357] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|82542909|ref|YP_406856.1| geranyltranstransferase [Shigella boydii Sb227] gi|81244320|gb|ABB65028.1| geranyltranstransferase [Shigella boydii Sb227] gi|320186050|gb|EFW60795.1| geranyltranstransferase [Shigella flexneri CDC 796-83] gi|332098531|gb|EGJ03497.1| geranyltranstransferase [Shigella boydii 3594-74] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|16128406|ref|NP_414955.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655] gi|74310990|ref|YP_309409.1| geranyltranstransferase [Shigella sonnei Ss046] gi|82775670|ref|YP_402017.1| geranyltranstransferase [Shigella dysenteriae Sd197] gi|89107291|ref|AP_001071.1| geranyltranstransferase [Escherichia coli str. K-12 substr. W3110] gi|170080007|ref|YP_001729327.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B] gi|170683582|ref|YP_001742558.1| geranyltranstransferase [Escherichia coli SMS-3-5] gi|187730884|ref|YP_001879130.1| geranyltranstransferase [Shigella boydii CDC 3083-94] gi|188492835|ref|ZP_03000105.1| geranyltranstransferase [Escherichia coli 53638] gi|191166720|ref|ZP_03028547.1| geranyltranstransferase [Escherichia coli B7A] gi|194438870|ref|ZP_03070955.1| geranyltranstransferase [Escherichia coli 101-1] gi|209917634|ref|YP_002291718.1| geranyltranstransferase [Escherichia coli SE11] gi|218698670|ref|YP_002406299.1| geranyltranstransferase [Escherichia coli IAI39] gi|218703704|ref|YP_002411223.1| geranyltranstransferase [Escherichia coli UMN026] gi|238899709|ref|YP_002925505.1| geranyltranstransferase [Escherichia coli BW2952] gi|253774594|ref|YP_003037425.1| geranyltranstransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160487|ref|YP_003043595.1| geranyltranstransferase [Escherichia coli B str. REL606] gi|256020388|ref|ZP_05434253.1| geranyltranstransferase [Shigella sp. D9] gi|256023962|ref|ZP_05437827.1| geranyltranstransferase [Escherichia sp. 4_1_40B] gi|293403541|ref|ZP_06647632.1| geranyltranstransferase [Escherichia coli FVEC1412] gi|293413676|ref|ZP_06656325.1| geranyltranstransferase [Escherichia coli B185] gi|297518956|ref|ZP_06937342.1| geranyltranstransferase [Escherichia coli OP50] gi|298379153|ref|ZP_06989034.1| geranyltranstransferase [Escherichia coli FVEC1302] gi|300900489|ref|ZP_07118656.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300918198|ref|ZP_07134805.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300930283|ref|ZP_07145696.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|300947928|ref|ZP_07162076.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300957986|ref|ZP_07170151.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|301022588|ref|ZP_07186460.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|301025692|ref|ZP_07189208.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|301647344|ref|ZP_07247156.1| polyprenyl synthetase [Escherichia coli MS 146-1] gi|307137064|ref|ZP_07496420.1| geranyltranstransferase [Escherichia coli H736] gi|309787014|ref|ZP_07681626.1| geranyltranstransferase [Shigella dysenteriae 1617] gi|309794853|ref|ZP_07689274.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|312970516|ref|ZP_07784697.1| geranyltranstransferase [Escherichia coli 1827-70] gi|331640938|ref|ZP_08342073.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H736] gi|331651356|ref|ZP_08352381.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli M718] gi|331661799|ref|ZP_08362722.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA143] gi|331671966|ref|ZP_08372762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA280] gi|332281567|ref|ZP_08393980.1| geranyltranstransferase [Shigella sp. D9] gi|124931|sp|P22939|ISPA_ECOLI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|46015527|pdb|1RQJ|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Risedronate gi|46015528|pdb|1RQJ|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Risedronate gi|216584|dbj|BAA00599.1| farnesyl diphosphate synthase [Escherichia coli] gi|1773105|gb|AAB40177.1| geranyltransperase [Escherichia coli] gi|1786623|gb|AAC73524.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655] gi|73854467|gb|AAZ87174.1| geranyltranstransferase [Shigella sonnei Ss046] gi|81239818|gb|ABB60528.1| geranyltranstransferase [Shigella dysenteriae Sd197] gi|85674561|dbj|BAE76201.1| geranyltranstransferase [Escherichia coli str. K12 substr. W3110] gi|169887842|gb|ACB01549.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B] gi|170521300|gb|ACB19478.1| geranyltranstransferase [Escherichia coli SMS-3-5] gi|187427876|gb|ACD07150.1| geranyltranstransferase [Shigella boydii CDC 3083-94] gi|188488034|gb|EDU63137.1| geranyltranstransferase [Escherichia coli 53638] gi|190903231|gb|EDV62953.1| geranyltranstransferase [Escherichia coli B7A] gi|194422164|gb|EDX38166.1| geranyltranstransferase [Escherichia coli 101-1] gi|209910893|dbj|BAG75967.1| geranyltranstransferase [Escherichia coli SE11] gi|218368656|emb|CAR16395.1| geranyltranstransferase [Escherichia coli IAI39] gi|218430801|emb|CAR11675.1| geranyltranstransferase [Escherichia coli UMN026] gi|238861298|gb|ACR63296.1| geranyltranstransferase [Escherichia coli BW2952] gi|242376199|emb|CAQ30890.1| farnesyl diphosphate synthase / geranyl diphosphate synthase [Escherichia coli BL21(DE3)] gi|253325638|gb|ACT30240.1| Polyprenyl synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972388|gb|ACT38059.1| geranyltranstransferase [Escherichia coli B str. REL606] gi|253976598|gb|ACT42268.1| geranyltranstransferase [Escherichia coli BL21(DE3)] gi|260450392|gb|ACX40814.1| Polyprenyl synthetase [Escherichia coli DH1] gi|284920231|emb|CBG33290.1| geranyltranstransferase [Escherichia coli 042] gi|291429394|gb|EFF02414.1| geranyltranstransferase [Escherichia coli FVEC1412] gi|291433734|gb|EFF06707.1| geranyltranstransferase [Escherichia coli B185] gi|298280266|gb|EFI21770.1| geranyltranstransferase [Escherichia coli FVEC1302] gi|299880004|gb|EFI88215.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|300315322|gb|EFJ65106.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|300355970|gb|EFJ71840.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300397469|gb|EFJ81007.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|300414649|gb|EFJ97959.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300452528|gb|EFK16148.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300461855|gb|EFK25348.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|301074489|gb|EFK89295.1| polyprenyl synthetase [Escherichia coli MS 146-1] gi|308121506|gb|EFO58768.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|308924592|gb|EFP70087.1| geranyltranstransferase [Shigella dysenteriae 1617] gi|309700683|emb|CBI99979.1| geranyltranstransferase [Escherichia coli ETEC H10407] gi|310337165|gb|EFQ02303.1| geranyltranstransferase [Escherichia coli 1827-70] gi|315135103|dbj|BAJ42262.1| geranyltranstransferase [Escherichia coli DH1] gi|320201662|gb|EFW76238.1| geranyltranstransferase [Escherichia coli EC4100B] gi|323164212|gb|EFZ50019.1| geranyltranstransferase [Shigella sonnei 53G] gi|323170503|gb|EFZ56153.1| geranyltranstransferase [Escherichia coli LT-68] gi|323943227|gb|EGB39383.1| polyprenyl synthetase [Escherichia coli E482] gi|323963407|gb|EGB58969.1| polyprenyl synthetase [Escherichia coli H489] gi|323972271|gb|EGB67481.1| polyprenyl synthetase [Escherichia coli TA007] gi|324016723|gb|EGB85942.1| polyprenyl synthetase [Escherichia coli MS 117-3] gi|331037736|gb|EGI09956.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H736] gi|331051097|gb|EGI23149.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli M718] gi|331060221|gb|EGI32185.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA143] gi|331070955|gb|EGI42314.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA280] gi|332103919|gb|EGJ07265.1| geranyltranstransferase [Shigella sp. D9] gi|332341784|gb|AEE55118.1| geranyltranstransferase IspA [Escherichia coli UMNK88] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|46015525|pdb|1RQI|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Dimethylallyl S- Thiolodiphosphate gi|46015526|pdb|1RQI|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Dimethylallyl S- Thiolodiphosphate Length = 300 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 29 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 88 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 89 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 148 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 149 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 204 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 205 ALPVLDKYAESIGLAFQVQDDILDVVGD 232 >gi|306813113|ref|ZP_07447306.1| geranyltranstransferase [Escherichia coli NC101] gi|331645594|ref|ZP_08346698.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli M605] gi|331656475|ref|ZP_08357437.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA206] gi|331681814|ref|ZP_08382447.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H299] gi|305853876|gb|EFM54315.1| geranyltranstransferase [Escherichia coli NC101] gi|324010099|gb|EGB79318.1| polyprenyl synthetase [Escherichia coli MS 57-2] gi|331045756|gb|EGI17882.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli M605] gi|331054723|gb|EGI26732.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA206] gi|331081016|gb|EGI52181.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H299] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|256828745|ref|YP_003157473.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028] gi|256577921|gb|ACU89057.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028] Length = 295 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 120/198 (60%), Gaps = 5/198 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L++++ Y+L+ GGK++R L A L + L AIECIH YSLIHDDLP+MD+ Sbjct: 34 LVASMEYSLMAGGKRLRPVLCLAWAELAGGSVHAVLDFACAIECIHTYSLIHDDLPAMDD 93 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKP+ H ++DE TAI+AG+GLLT AF + SS +L+ + + L+ G + Sbjct: 94 DDLRRGKPSNHKRFDEATAILAGDGLLTEAFTLASS--LELRPERILKAVFHLSTAAGPR 151 Query: 158 GMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ+LD + + Q+ + KTGAL+ +C +G ++ +E+ + +G Sbjct: 152 GMVGGQVLDMGLTGKSASLPQLREMHAKKTGALIETSCVTGCVLGGGDDSEQAKASEYGR 211 Query: 216 NLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 212 AIGLAFQVTDDILDVIGD 229 >gi|15611931|ref|NP_223582.1| geranyltranstransferase [Helicobacter pylori J99] gi|4155442|gb|AAD06447.1| GERANYLTRANSTRANSFERASE [Helicobacter pylori J99] Length = 303 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 115/194 (59%), Gaps = 11/194 (5%) Query: 49 GGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK+ R FL C+ + ++ ++ +IEC+H YSLIHDDLP MDN +RR Sbjct: 45 GGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRR 104 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 PT+H +YDE TA++ G+ L TY+FE++S+ + L+ I +L+ L+ N G++GM+ G Sbjct: 105 NHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESRIIVELVKILSANGGIKGMILG 162 Query: 163 QMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGI 219 Q LD ++ ++ Q+ + + KT L+ + G + + + E + L+ FG +G+ Sbjct: 163 QALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASGINDEELLKWLQAFGLKMGL 222 Query: 220 IFQLADDLLDCEED 233 FQ+ DD++D +D Sbjct: 223 CFQVLDDIIDVTQD 236 >gi|218688284|ref|YP_002396496.1| geranyltranstransferase [Escherichia coli ED1a] gi|218425848|emb|CAR06654.1| geranyltranstransferase [Escherichia coli ED1a] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|15800151|ref|NP_286163.1| geranyltranstransferase [Escherichia coli O157:H7 EDL933] gi|15829729|ref|NP_308502.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai] gi|168749882|ref|ZP_02774904.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113] gi|168756962|ref|ZP_02781969.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401] gi|168761626|ref|ZP_02786633.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501] gi|168768371|ref|ZP_02793378.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486] gi|168776274|ref|ZP_02801281.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196] gi|168783286|ref|ZP_02808293.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076] gi|168786267|ref|ZP_02811274.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869] gi|168800303|ref|ZP_02825310.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508] gi|195938512|ref|ZP_03083894.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4024] gi|208807604|ref|ZP_03249941.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206] gi|208815942|ref|ZP_03257121.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045] gi|208822955|ref|ZP_03263273.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042] gi|209397720|ref|YP_002269066.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115] gi|217326244|ref|ZP_03442328.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588] gi|254791605|ref|YP_003076442.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359] gi|261223902|ref|ZP_05938183.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK2000] gi|261256384|ref|ZP_05948917.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK966] gi|291281328|ref|YP_003498146.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615] gi|12513277|gb|AAG54771.1|AE005221_8 geranyltranstransferase (farnesyldiphosphate synthase) [Escherichia coli O157:H7 str. EDL933] gi|13359932|dbj|BAB33898.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai] gi|187768276|gb|EDU32120.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196] gi|188015849|gb|EDU53971.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113] gi|188999339|gb|EDU68325.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076] gi|189356028|gb|EDU74447.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401] gi|189362401|gb|EDU80820.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486] gi|189367958|gb|EDU86374.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501] gi|189373540|gb|EDU91956.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869] gi|189377422|gb|EDU95838.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508] gi|208727405|gb|EDZ77006.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206] gi|208732590|gb|EDZ81278.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045] gi|208737148|gb|EDZ84832.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042] gi|209159120|gb|ACI36553.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115] gi|209744014|gb|ACI70314.1| geranyltranstransferase [Escherichia coli] gi|209744016|gb|ACI70315.1| geranyltranstransferase [Escherichia coli] gi|209744018|gb|ACI70316.1| geranyltranstransferase [Escherichia coli] gi|209744020|gb|ACI70317.1| geranyltranstransferase [Escherichia coli] gi|209744022|gb|ACI70318.1| geranyltranstransferase [Escherichia coli] gi|217322465|gb|EEC30889.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588] gi|254591005|gb|ACT70366.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359] gi|290761201|gb|ADD55162.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615] gi|320192835|gb|EFW67475.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC1212] gi|320638415|gb|EFX08129.1| geranyltranstransferase [Escherichia coli O157:H7 str. G5101] gi|320643795|gb|EFX12918.1| geranyltranstransferase [Escherichia coli O157:H- str. 493-89] gi|320649146|gb|EFX17724.1| geranyltranstransferase [Escherichia coli O157:H- str. H 2687] gi|320656039|gb|EFX23955.1| geranyltranstransferase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661189|gb|EFX28620.1| geranyltranstransferase [Escherichia coli O55:H7 str. USDA 5905] gi|320665165|gb|EFX32258.1| geranyltranstransferase [Escherichia coli O157:H7 str. LSU-61] gi|326341183|gb|EGD64975.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1044] gi|326346042|gb|EGD69781.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1125] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|330826310|ref|YP_004389613.1| polyprenyl synthetase [Alicycliphilus denitrificans K601] gi|329311682|gb|AEB86097.1| Polyprenyl synthetase [Alicycliphilus denitrificans K601] Length = 297 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 121/197 (61%), Gaps = 6/197 (3%) Query: 41 SAIRYALL-GGKKIRSFLV-TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 +A+RYA+L GGK++R LV C ++ + ALR A+E IH YSL+HDD+P MDN Sbjct: 37 AAMRYAVLDGGKRLRPLLVLAACEAVGGLGQ-AALRAACAVELIHAYSLVHDDMPCMDND 95 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRGKPTVH+++ + A++AG+ L AFE++ +P+ + ++++L L G G Sbjct: 96 VLRRGKPTVHVRFGQAQALLAGDALQALAFELL-TPEDGVPPAMQARLCRLLAQAAGADG 154 Query: 159 MLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 M GGQ +D+ + + + Q+ + ++KTGAL+ + GA ++ ++ L +G Sbjct: 155 MAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGAACGEPARVAEQALAQYGAA 214 Query: 217 LGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD +D Sbjct: 215 IGLAFQVVDDVLDVTQD 231 >gi|288940506|ref|YP_003442746.1| polyprenyl synthetase [Allochromatium vinosum DSM 180] gi|288895878|gb|ADC61714.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180] Length = 297 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 84/226 (37%), Positives = 127/226 (56%), Gaps = 12/226 (5%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71 + R++T LD +L + RL A+RY +L GGK+IR L ++ Sbjct: 14 AARVETALDQILPPV-----SVQPSRLHEAMRYTVLAGGKRIRPLLAYAAGEALGLDAAL 68 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+E IH YSLIHDDLP+MD+ +RRG+PT H +DE TAI+AG+ L T AF+ + Sbjct: 69 LDHPACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAGDALQTLAFQAL 128 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189 + L R ++ +L G +GM+GGQ +D++ E +D Q+ I KTGAL+ Sbjct: 129 AE-APGLSAESRVAMVSALARASGARGMVGGQAMDLEAEGTPLDLVQLENIHIHKTGALI 187 Query: 190 CFACESGAIMAHAS--QNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + G ++AH ++ ERL + + LG+ FQ+ DD+LD E D Sbjct: 188 RVSVQMG-VLAHGGLDADKAERLDHYAKCLGLAFQIQDDVLDVEGD 232 >gi|210135119|ref|YP_002301558.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12] gi|210133087|gb|ACJ08078.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12] Length = 303 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 120/213 (56%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL C+ + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQD 236 >gi|261838303|gb|ACX98069.1| geranyltranstransferase [Helicobacter pylori 51] Length = 303 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 11/213 (5%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYFEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESPII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G + + Sbjct: 144 VELIKILSVNGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203 Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233 E + L+ FG G+ FQ+ DD++D +D Sbjct: 204 IKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQD 236 >gi|320108147|ref|YP_004183737.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4] gi|319926668|gb|ADV83743.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4] Length = 309 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 91/244 (37%), Positives = 129/244 (52%), Gaps = 21/244 (8%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+ + D L+ LL + + H ++RY++ GGK++R L E + Sbjct: 12 LKSGAAATDAALERLLPGSEIAPHSIHR-----SMRYSVFAGGKRLRPILCMEAGRMVAG 66 Query: 68 NHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + +G+A+E +H YSLIHDDLPS D+ +RRGKPT HI + E AI+ G+ L T+ Sbjct: 67 KLPAGIADLGSALEMLHTYSLIHDDLPSFDDDDLRRGKPTSHIVFGEAIAILTGDALQTF 126 Query: 127 AFEIISS---PKTQLKDNIR-----SQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDET-- 175 A+E +S P IR + + T GL GM+GGQ+LDI+ E T Sbjct: 127 AYETLSRLSCPAEATVQIIREIAIATGTGVGPTDGTGLPYGMIGGQVLDIEGEGTKPTAE 186 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEE 232 QV I + KTGAL+ + +G I A AS E LR FG+ G+ FQ+ DD+LD E Sbjct: 187 QVDRIHRAKTGALITTSIVTGGIFAGASAETVEHLRLFGQRAGLAFQIVDDVLDMTQSSE 246 Query: 233 DLPK 236 DL K Sbjct: 247 DLGK 250 >gi|238852560|ref|ZP_04642970.1| farnesyltranstransferase [Lactobacillus gasseri 202-4] gi|238834706|gb|EEQ26933.1| farnesyltranstransferase [Lactobacillus gasseri 202-4] Length = 288 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 78/230 (33%), Positives = 127/230 (55%), Gaps = 25/230 (10%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL 70 + +ID L+D H+ ++ ++ + S I Y+++ GGK++R L A+L +N+ Sbjct: 11 TPQIDKFLED-------HLASEVDNPIFSKIMSYSVMAGGKRLRPLLF--LATLETLNYK 61 Query: 71 ---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL Sbjct: 62 ISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHRKWGEAEAILAGDALLPLG 121 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ--VFMIQK 182 + I+ + L + ++ +G GM+GGQ LDI ++ + E + ++ Sbjct: 122 IQWITEGSNS------AALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKENAKVIDQMEW 175 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTG L+ + + A+ A AS +E +RL F + G +Q+ DDL+D E Sbjct: 176 LKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVE 225 >gi|323976098|gb|EGB71191.1| polyprenyl synthetase [Escherichia coli TW10509] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIGGMCGGQALDLDAEGKHVPLNALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPILDKYAESIGLAFQVQDDILDVVGD 231 >gi|281177591|dbj|BAI53921.1| geranyltranstransferase [Escherichia coli SE15] Length = 299 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|212703021|ref|ZP_03311149.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098] gi|212673609|gb|EEB34092.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098] Length = 298 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/234 (36%), Positives = 131/234 (55%), Gaps = 14/234 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQH-NDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + S L+E K +++ L A+ + Q RL ++ Y+L GGK++R L CA Sbjct: 8 MKSLLKERGKLVESYL-------ATCLDGQEMPPRLRESMLYSLQAGGKRLRPVLCLSCA 60 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +L + L +AIE +H YSLIHDDLP+MD+ +RRGKP+ H +DE TAI+AG+ Sbjct: 61 ALCGLKAEDVLPFASAIEMVHTYSLIHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDA 120 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 LLT AF + + +L + M G GM+GGQ D+ + + +++ Sbjct: 121 LLTDAFAHMC--RVELPAGQVLRAMAEFARAAGSSGMVGGQEWDMLYTGLPPVSMAELRR 178 Query: 183 ---MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 MKTGAL+ +C GA++A A+ + ER+ +G LG+ FQ+ADD+LD D Sbjct: 179 MHAMKTGALLRASCVCGALLAGAADDVCERIGRYGAALGVAFQIADDILDVVSD 232 >gi|261839715|gb|ACX99480.1| geranyltranstransferase (ispA) [Helicobacter pylori 52] Length = 303 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 123/214 (57%), Gaps = 13/214 (6%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ + Q+ + + KT L+ + G ++A Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLSLEQLTFLHEHKTAKLISASLMMG-LVAS 202 Query: 202 ASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233 ++E + L+ FG G+ FQ+ DD++D +D Sbjct: 203 GIKDEGLFKWLQAFGLKTGLCFQVLDDIIDVTQD 236 >gi|332201672|gb|EGJ15742.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA47368] Length = 291 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVATALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|308183081|ref|YP_003927208.1| geranyltranstransferase [Helicobacter pylori PeCan4] gi|308065266|gb|ADO07158.1| geranyltranstransferase [Helicobacter pylori PeCan4] Length = 303 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 125/214 (58%), Gaps = 13/214 (6%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83 H+++ H + L GGK+ R FL CA + ++ ++ +IEC+H Sbjct: 26 HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++S+ + L+ +I Sbjct: 86 TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143 Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +L+ L+ N G++GM+ GQ LD ++ ++ Q+ + + KT L+ + G ++A Sbjct: 144 VELVKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMG-LVAS 202 Query: 202 ASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233 ++E + L+ FG +G+ FQ+ DD++D +D Sbjct: 203 GIKDEGLFKWLQDFGLKMGLCFQVLDDIIDVTQD 236 >gi|56708589|ref|YP_170485.1| geranyltranstransferase [Francisella tularensis subsp. tularensis SCHU S4] gi|110671060|ref|YP_667617.1| geranyltranstransferase [Francisella tularensis subsp. tularensis FSC198] gi|134301456|ref|YP_001121424.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|224457771|ref|ZP_03666244.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|254371220|ref|ZP_04987222.1| geranyltranstransferase [Francisella tularensis subsp. tularensis FSC033] gi|254875451|ref|ZP_05248161.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|56605081|emb|CAG46195.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321393|emb|CAL09578.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis FSC198] gi|134049233|gb|ABO46304.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|151569460|gb|EDN35114.1| geranyltranstransferase [Francisella tularensis subsp. tularensis FSC033] gi|254841450|gb|EET19886.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159817|gb|ADA79208.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 293 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 108/198 (54%), Gaps = 11/198 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LLSA+ Y+ GGK+IR+ V ++ ++ A+E IH YSLIHDDLP+MDN Sbjct: 28 LLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKIAFAVESIHTYSLIHDDLPAMDN 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPT HI+++E TAI+AG+ L AFEI+ D ++ L G Sbjct: 88 DTLRRGKPTCHIKFNEATAILAGDALQALAFEILQDINYSDIDKLKKINKL-FAQYCGAS 146 Query: 158 GMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLR 211 GM+GGQ LDI+ E I+E Q+ K A M AC + +QN + + L Sbjct: 147 GMVGGQQLDIEGENKKLKIEELQILHTNKT---AKMFRACIVLPYILSQNQNSQIEDLLV 203 Query: 212 CFGENLGIIFQLADDLLD 229 + +G+ FQ+ DD+LD Sbjct: 204 RLSDLIGLCFQIKDDILD 221 >gi|238854801|ref|ZP_04645131.1| geranyltranstransferase [Lactobacillus jensenii 269-3] gi|260664032|ref|ZP_05864885.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii SJ-7A-US] gi|282933879|ref|ZP_06339227.1| geranyltranstransferase [Lactobacillus jensenii 208-1] gi|238832591|gb|EEQ24898.1| geranyltranstransferase [Lactobacillus jensenii 269-3] gi|260561918|gb|EEX27887.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii SJ-7A-US] gi|281301968|gb|EFA94222.1| geranyltranstransferase [Lactobacillus jensenii 208-1] Length = 288 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 82/226 (36%), Positives = 123/226 (54%), Gaps = 20/226 (8%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRS--FLVTECASLFNVNH 69 K+ I+D L Q H+ ++ D+ S I Y+++ GGK++R FL T + +N Sbjct: 9 KKYQPIIDHYLEQ---HLASEIEDKKFSQIMAYSVMAGGKRLRPLLFLATLISLGKEINE 65 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +RV IE IH YSLIHDDLP+MDN RRG T H ++ E AI+AG+ LL E Sbjct: 66 -KEIRVACGIELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAILAGDALLPMGLE 124 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM--IQKMK 184 I+S K ++++ + + IG GM GGQ LDI +E + E F+ ++ +K Sbjct: 125 WIASAKN-------AEMVAVMANAIGPNGMAGGQYLDIDSTNNEAVKEDNNFINRMEWLK 177 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 TG L+ + E I A+A+ ++ L F N G +Q+ DDL+D Sbjct: 178 TGCLIKASVELATIYANANDLLRKNLVDFSANFGRAYQIYDDLVDV 223 >gi|91209490|ref|YP_539476.1| geranyltranstransferase [Escherichia coli UTI89] gi|218557330|ref|YP_002390243.1| geranyltranstransferase [Escherichia coli S88] gi|237707585|ref|ZP_04538066.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA] gi|91071064|gb|ABE05945.1| geranyltranstransferase [Escherichia coli UTI89] gi|218364099|emb|CAR01764.1| geranyltranstransferase [Escherichia coli S88] gi|222032216|emb|CAP74955.1| Geranyltranstransferase [Escherichia coli LF82] gi|226898795|gb|EEH85054.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA] gi|294493422|gb|ADE92178.1| geranyltranstransferase [Escherichia coli IHE3034] gi|307628110|gb|ADN72414.1| geranyltranstransferase [Escherichia coli UM146] gi|312944998|gb|ADR25825.1| geranyltranstransferase [Escherichia coli O83:H1 str. NRG 857C] gi|315289864|gb|EFU49254.1| polyprenyl synthetase [Escherichia coli MS 110-3] gi|323952967|gb|EGB48835.1| polyprenyl synthetase [Escherichia coli H252] gi|323958614|gb|EGB54317.1| polyprenyl synthetase [Escherichia coli H263] Length = 299 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKRVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|324114640|gb|EGC08608.1| polyprenyl synthetase [Escherichia fergusonii B253] Length = 299 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPILDKYAESIGLAFQVQDDILDVVGD 231 >gi|317056625|ref|YP_004105092.1| polyprenyl synthetase [Ruminococcus albus 7] gi|315448894|gb|ADU22458.1| Polyprenyl synthetase [Ruminococcus albus 7] Length = 297 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 114/197 (57%), Gaps = 7/197 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMD 96 +L A+ Y+L GGK++R LV E + + + +V ++E IH YSLIHDDLP MD Sbjct: 34 VLEAMEYSLTAGGKRLRPILVLEFYRMCGGEDIDKMIKVACSVELIHTYSLIHDDLPCMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTHNI 154 N RRGKP+ H + E A++AG+ L T AFE+I+ + + + +ML L+ I Sbjct: 94 NDDFRRGKPSCHKAFSEDIALLAGDALNTLAFEVITDCAMEGTISAETAVMLVSVLSKAI 153 Query: 155 GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+GGQ++D+ ++E ID + +Q KTGAL+ AC G +++ + Sbjct: 154 GTDGMIGGQVIDLETENEVIDIETLNRLQSCKTGALIEAACVMGVVLSGKMEYIPAAAD- 212 Query: 213 FGENLGIIFQLADDLLD 229 + + +G FQ+ DD+LD Sbjct: 213 YAQAMGRAFQIVDDILD 229 >gi|218549919|ref|YP_002383710.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469] gi|218357460|emb|CAQ90099.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469] Length = 299 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|110640682|ref|YP_668410.1| geranyltranstransferase [Escherichia coli 536] gi|191173497|ref|ZP_03035024.1| geranyltranstransferase [Escherichia coli F11] gi|300997392|ref|ZP_07181732.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|110342274|gb|ABG68511.1| geranyltranstransferase [Escherichia coli 536] gi|190906206|gb|EDV65818.1| geranyltranstransferase [Escherichia coli F11] gi|300304211|gb|EFJ58731.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|324010681|gb|EGB79900.1| polyprenyl synthetase [Escherichia coli MS 60-1] Length = 299 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKRVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum Ice1] gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum Ice1] Length = 296 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 82/207 (39%), Positives = 120/207 (57%), Gaps = 18/207 (8%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+L GGK++R LV + + + A+E IH YSLIHDDLP+MD+ + Sbjct: 35 AMRYSLFAGGKRLRPVLVLAGCRAVGGDEESVMAAACALEMIHTYSLIHDDLPAMDDDDL 94 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--------SPKTQLKDNIRSQLMLSLTH 152 RRG PT H+ + E TAI+AG+GLLT AF +++ SP L Q++ L Sbjct: 95 RRGMPTNHVVFGEATAILAGDGLLTRAFGVLAEEGLRCGRSPALVL------QVIAELAD 148 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G GM+GGQ++D++ E ID + I KTGAL+ + GA++ S + E L Sbjct: 149 AAGSMGMIGGQVMDMESENKQIDVATMAYIHAHKTGALIRASLRIGALLGGGSVEQVEAL 208 Query: 211 RCFGENLGIIFQLADDLLDCEEDLPKK 237 +G++LG+ FQ+ DDLLD + D P+K Sbjct: 209 SRYGDHLGLAFQITDDLLDIQGD-PEK 234 >gi|312112946|ref|YP_004010542.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311218075|gb|ADP69443.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 308 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 114/197 (57%), Gaps = 5/197 (2%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L ++R++LL K++R+ L A AL + A+E IH SLI DDLP M Sbjct: 30 DPLQGSLRHSLLAPAKRVRAVLTLVAARELGGRESDALDLACAVEMIHTSSLILDDLPCM 89 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN RRG P+ H + E TAI+A GL+ A+ +++ +L + R++ + L ++G Sbjct: 90 DNAATRRGIPSNHRVFGEATAILASIGLMNRAYG-VAAASAKLSADQRAEAVGVLEWSVG 148 Query: 156 LQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 L+G++ GQ D+ D ++E Q+ + KTGAL A E GAI+A+ +Q + +R F Sbjct: 149 LEGLVRGQHDDLADYRATMNEAQLETMYAQKTGALFAAAAECGAIVAN-NQAARPAMRKF 207 Query: 214 GENLGIIFQLADDLLDC 230 G +LG+ FQ+ DD+LD Sbjct: 208 GLDLGVGFQILDDVLDA 224 >gi|238917015|ref|YP_002930532.1| geranyltranstransferase [Eubacterium eligens ATCC 27750] gi|238872375|gb|ACR72085.1| geranyltranstransferase [Eubacterium eligens ATCC 27750] Length = 297 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 126/225 (56%), Gaps = 7/225 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR-V 75 ++D++L+ +T + ++ ++ Y++ GGK++R L+ E L N + Sbjct: 13 VFINDIILRYLPE-ETGLDKKIRESMNYSVNAGGKRVRPMLMLEVYKLCGGNDCQVVYPF 71 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+ECIH YSL+HDDLP+MDN RRG+ T H + E I+AG+GLL A+EI++ Sbjct: 72 MAALECIHSYSLVHDDLPAMDNDDYRRGRLTTHKVFGEDFGILAGDGLLNLAYEIMAEAL 131 Query: 136 TQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCF 191 + +I +++ M + G++GM+GGQ +D++ + E Q+ I ++KTGAL+ Sbjct: 132 VSGEGDIETKAKAMEVIARKAGIKGMVGGQAVDVELTGRTLSEEQLDFIFRLKTGALIEA 191 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A +GA +A ++L +G FQ+ DD+LD L + Sbjct: 192 AFLAGAYLAGCDDETADKLCRAASLIGFAFQIRDDILDVTSSLEE 236 >gi|160947156|ref|ZP_02094323.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270] gi|158446290|gb|EDP23285.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270] Length = 282 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 4/192 (2%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 +GGK+IR+ L+ E + A+ A+E IH YSL+HDDLP MD+ RRG +V Sbjct: 39 VGGKRIRAILLLEAFKICRDISDIAIDFSVALELIHNYSLVHDDLPEMDDDKFRRGVLSV 98 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLS--LTHNIGLQGMLGGQ 163 + +Y + A++ G+ LL A I+ QL+ D I++ + S + ++ G+ GM+ GQ Sbjct: 99 YGKYGQSNAVLVGDELLNNANLIMFKAIKQLENIDEIKNAISASEIILNSSGINGMVYGQ 158 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 LD+++ + + + I +KTG L A +GA + AS N+ L + +NLG++FQL Sbjct: 159 FLDLENNVENLSDIEKINSLKTGELFKAAILAGAKLGGASDNDLAHLEIYAKNLGLVFQL 218 Query: 224 ADDLLDCEEDLP 235 DDL D +ED+ Sbjct: 219 QDDLFDYDEDVE 230 >gi|23099332|ref|NP_692798.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831] gi|22777561|dbj|BAC13833.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831] Length = 294 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 6/211 (2%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 SH+ +N L ++ Y+L GGK++R L+ ++ + AIE IH YSL Sbjct: 25 SHLDIPNN--LKESMLYSLNAGGKRLRPILILASYEVYGKTLDKVMSSAVAIEMIHTYSL 82 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLP+MD+ RRGK T H Q++E TAI+AG+ LLTY+F++ISS D + +L+ Sbjct: 83 IHDDLPAMDDDDYRRGKLTNHKQFNEATAILAGDALLTYSFQLISSDDLLTSDE-KVELI 141 Query: 148 LSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 L+ G GM+ GQ+LD++ E + ++ I +KTG L+ FA +GA + A+ N Sbjct: 142 RILSEASGPAGMVAGQILDMEAEKQAVTLEEMEEIHALKTGELIRFAIIAGAYLGGATDN 201 Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + L + LG+IFQ+ DD+LD D K Sbjct: 202 QLKHLTDYAYYLGLIFQVQDDILDITGDASK 232 >gi|22124916|ref|NP_668339.1| geranyltranstransferase [Yersinia pestis KIM 10] gi|45440604|ref|NP_992143.1| geranyltranstransferase [Yersinia pestis biovar Microtus str. 91001] gi|108808661|ref|YP_652577.1| geranyltranstransferase [Yersinia pestis Antiqua] gi|108811077|ref|YP_646844.1| geranyltranstransferase [Yersinia pestis Nepal516] gi|145600070|ref|YP_001164146.1| geranyltranstransferase [Yersinia pestis Pestoides F] gi|149364978|ref|ZP_01887013.1| geranyltranstransferase [Yersinia pestis CA88-4125] gi|162421705|ref|YP_001607439.1| geranyltranstransferase [Yersinia pestis Angola] gi|165926609|ref|ZP_02222441.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. F1991016] gi|165935882|ref|ZP_02224452.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. IP275] gi|166011123|ref|ZP_02232021.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213125|ref|ZP_02239160.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. B42003004] gi|167398812|ref|ZP_02304336.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421520|ref|ZP_02313273.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423513|ref|ZP_02315266.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470229|ref|ZP_02334933.1| geranyltranstransferase [Yersinia pestis FV-1] gi|218930206|ref|YP_002348081.1| geranyltranstransferase [Yersinia pestis CO92] gi|229838781|ref|ZP_04458940.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896065|ref|ZP_04511235.1| geranyltranstransferase [Yersinia pestis Pestoides A] gi|229899349|ref|ZP_04514492.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229901304|ref|ZP_04516426.1| geranyltranstransferase [Yersinia pestis Nepal516] gi|270489496|ref|ZP_06206570.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294504904|ref|YP_003568966.1| geranyltranstransferase [Yersinia pestis Z176003] gi|21957753|gb|AAM84590.1|AE013704_7 geranyltranstransferase [Yersinia pestis KIM 10] gi|45435461|gb|AAS61020.1| geranyltranstransferase [Yersinia pestis biovar Microtus str. 91001] gi|108774725|gb|ABG17244.1| farnesyl-diphosphate synthase [Yersinia pestis Nepal516] gi|108780574|gb|ABG14632.1| farnesyl-diphosphate synthase [Yersinia pestis Antiqua] gi|115348817|emb|CAL21771.1| geranyltranstransferase [Yersinia pestis CO92] gi|145211766|gb|ABP41173.1| farnesyl-diphosphate synthase [Yersinia pestis Pestoides F] gi|149291391|gb|EDM41465.1| geranyltranstransferase [Yersinia pestis CA88-4125] gi|162354520|gb|ABX88468.1| geranyltranstransferase [Yersinia pestis Angola] gi|165916027|gb|EDR34634.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. IP275] gi|165921537|gb|EDR38734.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990123|gb|EDR42424.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205912|gb|EDR50392.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960439|gb|EDR56460.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051316|gb|EDR62724.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057683|gb|EDR67429.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681233|gb|EEO77327.1| geranyltranstransferase [Yersinia pestis Nepal516] gi|229687751|gb|EEO79824.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229695147|gb|EEO85194.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700988|gb|EEO89017.1| geranyltranstransferase [Yersinia pestis Pestoides A] gi|262362970|gb|ACY59691.1| geranyltranstransferase [Yersinia pestis D106004] gi|262366890|gb|ACY63447.1| geranyltranstransferase [Yersinia pestis D182038] gi|270338000|gb|EFA48777.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294355363|gb|ADE65704.1| geranyltranstransferase [Yersinia pestis Z176003] gi|320016363|gb|ADV99934.1| geranyltranstransferase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 306 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 118/203 (58%), Gaps = 5/203 (2%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L+ A+RY A++GGK++R +LV +F ++ AAIECIH YSLIHDDLP+ Sbjct: 36 NSNLIEAMRYGAVIGGKRLRPYLVYATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPA 95 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153 MD+ +RRG+PT H+++ E AI+AG+ L T AF I++ +P + D R +++ L Sbjct: 96 MDDDDLRRGQPTCHVKFGEAHAILAGDALQTLAFSILAEAPMPDVADKDRLSMIIELAQA 155 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210 G GM GQ LD++ E + + I + KTGAL+ A GA A A + L Sbjct: 156 SGAAGMCAGQALDLEAETRPVLLGDLEQIHRHKTGALIRAAVRLGAQAAGEAGRKTLLSL 215 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + E +G+ FQ+ DD+LD D Sbjct: 216 DRYAEAIGLAFQVQDDILDVIGD 238 >gi|320181597|gb|EFW56512.1| geranyltranstransferase [Shigella boydii ATCC 9905] Length = 299 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T A+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPATAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDSDMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|160880644|ref|YP_001559612.1| polyprenyl synthetase [Clostridium phytofermentans ISDg] gi|160429310|gb|ABX42873.1| Polyprenyl synthetase [Clostridium phytofermentans ISDg] Length = 335 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 40/232 (17%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECA--------------------------SLFNVNHLT 71 + A+ Y+LL GGK+IR ++ E S F Sbjct: 36 IFDALSYSLLAGGKRIRPIILLETYQALKEQEKGGALRASQLDIINENADFSWFKTLDDI 95 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 + A+E IH YSL+HDDLP+MDN RRGK T H +Y E I+AG+ LL AFE++ Sbjct: 96 VTKFSVALEMIHTYSLVHDDLPAMDNDEYRRGKLTTHAKYGEDMGILAGDALLNGAFELV 155 Query: 132 SSPKTQLKDNIRSQLMLSLTHNI-----------GLQGMLGGQMLDIQ--DEFIDETQVF 178 + +KD S ++L + G+ GM+GGQ++D++ + + ++ Sbjct: 156 AEAFANIKDIENSTDAITLYDRVSRAYQMLSSRSGMYGMIGGQVVDVERTGSVLSKEELL 215 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I ++KTGAL+ + GAI++ A+Q E R + +G+ FQ+ DD+LD Sbjct: 216 FIYELKTGALLEASFLIGAILSGANQEELIRFTKIAKKVGLAFQIQDDILDV 267 >gi|326693827|ref|ZP_08230832.1| geranylgeranyl pyrophosphate synthase [Leuconostoc argentinum KCTC 3773] Length = 299 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 17/196 (8%) Query: 45 YALL-GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 YA+L GGK++R L S F AL++ A+E +H YSL+HDDLP+MDN +RR Sbjct: 38 YAVLNGGKRLRPLLTLAVISSFQQATTPQALKLATAVEWVHSYSLVHDDLPAMDNDLLRR 97 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP------KTQLKDNIRSQLMLSLTHNIGL 156 G+P+VH ++ E AI+ G+ LLT AFE++++ +T++ D ++ L H G Sbjct: 98 GQPSVHAKFGEAAAILVGDALLTGAFEVVTTANALAPDETKIPDQTIVTIVQDLAHFSGA 157 Query: 157 QGMLGGQMLDIQD---EFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNE----K 207 GM+ GQM D+ + ET + I KT AL+ FA + GA +A Q + Sbjct: 158 AGMVIGQMHDMGNHGQNLQTETDWLLQEIYTPKTAALIQFAAKLGAQLATLQQTQVPEAT 217 Query: 208 ERLRCFGENLGIIFQL 223 + + FG + G+ FQ+ Sbjct: 218 QAMTQFGLDFGLAFQI 233 >gi|187931182|ref|YP_001891166.1| geranyl diphosphate synthase/farnesyl diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712091|gb|ACD30388.1| geranyl diphosphate synthase/farnesyl diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] Length = 293 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/196 (37%), Positives = 104/196 (53%), Gaps = 7/196 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LLSA+ Y+ GGK+IR+ V ++ ++ A+E IH YSLIHDDLP+MDN Sbjct: 28 LLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKIAFAVESIHTYSLIHDDLPAMDN 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPT HI+++E TAI+AG+ L AFEI+ D ++ L G Sbjct: 88 DTLRRGKPTCHIKFNEATAILAGDALQALAFEILQDINYSDIDKLKKINKL-FAQYCGAS 146 Query: 158 GMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+GGQ LDI+ E I+E Q+ K +C SQ E +R Sbjct: 147 GMVGGQQLDIEGENKKLKIEELQILHTNKTAKMFRVCIVLPYILSQNQNSQIEDLLVR-L 205 Query: 214 GENLGIIFQLADDLLD 229 + +G+ FQ+ DD+LD Sbjct: 206 SDLIGLCFQIKDDILD 221 >gi|229543903|ref|ZP_04432962.1| Polyprenyl synthetase [Bacillus coagulans 36D1] gi|229325042|gb|EEN90718.1| Polyprenyl synthetase [Bacillus coagulans 36D1] Length = 289 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 121/203 (59%), Gaps = 8/203 (3%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ Y+L GGK+IR L+ S ++ A+E +H YSLIHDDLP+MD+ Sbjct: 28 LKDAMHYSLQAGGKRIRPLLLLSTVSALGKPAGRGMQTACAVEMLHTYSLIHDDLPAMDD 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPT H + E AI+AG+GLLT++F +I+ L D ++ +L+ L + G + Sbjct: 88 DDLRRGKPTNHKVFGEAVAILAGDGLLTHSFRLIAE-DPGLDDALKVKLIALLAKSAGPE 146 Query: 158 GMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+ GQ+ D++ E ++E Q I KTG L+ F+ +GA++ AS + E+ F Sbjct: 147 GMVAGQVADMEGENKTLTLEELQY--IHAHKTGKLLRFSVLAGAMIGGASTEQLEKFGQF 204 Query: 214 GENLGIIFQLADDLLDCEEDLPK 236 ++LG+ FQ+ DD+LD E + K Sbjct: 205 ADHLGLAFQIRDDILDIEGEQEK 227 >gi|28897461|ref|NP_797066.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633] gi|260876421|ref|ZP_05888776.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034] gi|28805673|dbj|BAC58950.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633] gi|308092915|gb|EFO42610.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034] Length = 294 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 14/238 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L S + N+++++ L+ L Q L+ A++Y LL GGK++R FLV Sbjct: 1 MQQTLTSFQERNNQQLNLWLEQLPYQ---------EQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176 G+ L T AF II+ P + +N R ++ +L H+ G GM GQ LD+ ++ + + Sbjct: 112 GDALQTLAFTIIADGPLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 + I + KTGAL+ A + GA+ A E L + + +G+ FQ+ DD+LD D Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISD 229 >gi|284048214|ref|YP_003398553.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731] gi|283952435|gb|ADB47238.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731] Length = 291 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/191 (36%), Positives = 103/191 (53%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + V A +E IH YSLIHDDLPSMDN RRG+ T H Sbjct: 41 GGKRLRPILLMAAADAVGAKGSDFVAVAAGLEMIHTYSLIHDDLPSMDNDDYRRGRLTNH 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQM 164 + + A++AG+GLLT AFE++ + + +++L + + G GM+GGQ Sbjct: 101 KVFGDAMALLAGDGLLTQAFEVMLEQR-----GVDPKVLLEVVRLVAKCAGPTGMVGGQA 155 Query: 165 LDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 LDI +D+ + Q+ + + KTGA+ A GA++ A + F G+ FQ Sbjct: 156 LDITSEDQQLTLEQMKKLHEAKTGAMFVAAVRGGAMLGGADPETLRIMTHFANLFGLAFQ 215 Query: 223 LADDLLDCEED 233 + DD+LD E D Sbjct: 216 ITDDILDVEGD 226 >gi|90420014|ref|ZP_01227923.1| putative geranylgeranyl pyrophosphate synthase [Aurantimonas manganoxydans SI85-9A1] gi|90336055|gb|EAS49803.1| putative geranylgeranyl pyrophosphate synthase [Aurantimonas manganoxydans SI85-9A1] Length = 318 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 4/191 (2%) Query: 42 AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 AIR ++L GK++R + A + A+ G A+E +H SLI DDLP MD+ + Sbjct: 41 AIRESVLAPGKRLRPMMAALTAGDLGGDEDVAVDAGCAVEMVHAASLILDDLPCMDDATM 100 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG+P H+ + E A+++ +L+ A+E+++ + L R + + LT +G++G++ Sbjct: 101 RRGRPAAHVTHGEDVAVLSAIAILSGAYEMLARVE-GLSPAARLEAVTVLTRAVGVEGLV 159 Query: 161 GGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQ D++ + ++ KTGAL A E+GAI A A + + LR F LG Sbjct: 160 GGQFADLRGGRAERPLHEIAATNGRKTGALFLAAVETGAIAAGAGETTRAHLRGFATELG 219 Query: 219 IIFQLADDLLD 229 FQL DDLLD Sbjct: 220 HAFQLLDDLLD 230 >gi|92430262|gb|ABE77350.1| CrtE [Pantoea sp. C1B1Y] Length = 303 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/195 (37%), Positives = 106/195 (54%), Gaps = 5/195 (2%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 AL GK+IR L+ A N A L + A+E +H SLI DD+P MD+ +RRG Sbjct: 49 ALATGKRIRPLLLLLAARDLGCNATPAGLLDLACAVEMVHAASLILDDMPCMDDAQLRRG 108 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 +PT+H QY E AI+A LL+ AF ++++ + L R+ + L+H +G+QG++ GQ Sbjct: 109 RPTIHCQYGEHVAILAAVALLSKAFGVVAAAEG-LTATTRADAVAELSHAVGMQGLVQGQ 167 Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D+ D+ + M KT L C + + +I+A AS +E+L F NLG F Sbjct: 168 FKDLSEGDKPRSADAILMTNHYKTSTLFCASMQMASIVAEASGEAREQLHRFSLNLGQAF 227 Query: 222 QLADDLLDCEEDLPK 236 QL DDL D D K Sbjct: 228 QLLDDLTDGMADTGK 242 >gi|261346381|ref|ZP_05974025.1| geranyltranstransferase [Providencia rustigianii DSM 4541] gi|282565699|gb|EFB71234.1| geranyltranstransferase [Providencia rustigianii DSM 4541] Length = 305 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 116/201 (57%), Gaps = 13/201 (6%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A++Y LLGGK++R FL + V+ AA+ECIH YSLIHDDLP+MD+ Sbjct: 38 LAQAMKYGTLLGGKRLRPFLTYAVGEMLGVSQDNLDAPAAAVECIHAYSLIHDDLPAMDD 97 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156 +RRG+PT HI++ E A++AG+ L T+AF+++SS ++ D R ++ L + GL Sbjct: 98 DDLRRGQPTCHIKFGEGNAVLAGDALQTFAFQLLSSAAMPEVSDKDRIAMISELAYASGL 157 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209 GM GGQ LD+ E +D + I + KTGAL+ A GA A EK R Sbjct: 158 AGMCGGQALDLDAEGKRVDLAALERIHQHKTGALIRAAIRLGAYAA----GEKGRQSIAI 213 Query: 210 LRCFGENLGIIFQLADDLLDC 230 L + +G+ FQ+ DD+LD Sbjct: 214 LDQYANAIGLAFQVQDDILDV 234 >gi|325498296|gb|EGC96155.1| geranyltranstransferase [Escherichia fergusonii ECD227] Length = 299 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAG 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|323965104|gb|EGB60563.1| polyprenyl synthetase [Escherichia coli M863] gi|327254743|gb|EGE66359.1| geranyltranstransferase [Escherichia coli STEC_7v] Length = 299 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 82/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+EC+H YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECVHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPILDKYAESIGLAFQVQDDILDVVGD 231 >gi|308095603|ref|ZP_05907188.2| geranyltranstransferase [Vibrio parahaemolyticus Peru-466] gi|308125727|ref|ZP_05776964.2| geranyltranstransferase [Vibrio parahaemolyticus K5030] gi|308086887|gb|EFO36582.1| geranyltranstransferase [Vibrio parahaemolyticus Peru-466] gi|308113754|gb|EFO51294.1| geranyltranstransferase [Vibrio parahaemolyticus K5030] Length = 295 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 14/238 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L S + N+++++ L+ L Q L+ A++Y LL GGK++R FLV Sbjct: 2 MQQTLTSFQERNNQQLNLWLEQLPYQ---------EQPLIQAMKYGLLLGGKRVRPFLVY 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 53 ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 112 Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176 G+ L T AF II+ P + +N R ++ +L H+ G GM GQ LD+ ++ + + Sbjct: 113 GDALQTLAFTIIADGPLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 172 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 + I + KTGAL+ A + GA+ A E L + + +G+ FQ+ DD+LD D Sbjct: 173 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISD 230 >gi|313496894|gb|ADR58260.1| IspA [Pseudomonas putida BIRD-1] Length = 295 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 127/225 (56%), Gaps = 12/225 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+D L+ L + + + +RL +A+RY+++ GGK++R L A Sbjct: 12 RVDAALEPLFIAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQAN 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF + Sbjct: 67 GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLD 126 Query: 134 P--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189 P Q+ D+IR ++ L G GM+GGQ +D+ + +D+ + + + KTGAL+ Sbjct: 127 PCLSPQI-DSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALI 185 Query: 190 CFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ A A + + L+ + + +G+ FQ+ DD+LD E D Sbjct: 186 EASVRLGALASARAEPAQLDALQTYAQAIGLAFQVQDDILDVESD 230 >gi|258511741|ref|YP_003185175.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478467|gb|ACV58786.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 291 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 77/195 (39%), Positives = 109/195 (55%), Gaps = 3/195 (1%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+ Y+L+ GK++R LV A F V L AA+E IHCYSLIHDDLP MD Sbjct: 28 RLKEAMNYSLMADGKRLRPALVIATAETFGVPRDRVLPAAAAVELIHCYSLIHDDLPCMD 87 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PT H+ + E A++AG+ LLT AF +++ P + + ++ +L G+ Sbjct: 88 DDDLRRGQPTNHVVFGEAMALLAGDALLTEAFHLLARPLEGVPAERQLAMIRTLASRAGV 147 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ +DI+ T V I KT L+ E G A + L C+G Sbjct: 148 DGMVGGQAVDIERTGGQGTLQDVEFIHLHKTARLIQACVEIGGYFADLDDQVRWALSCYG 207 Query: 215 ENLGIIFQLADDLLD 229 E LG+ FQ+ DD+LD Sbjct: 208 ECLGLAFQMIDDVLD 222 >gi|218289630|ref|ZP_03493850.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218240280|gb|EED07463.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 291 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 9/224 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67 L+ + ++ +L L T H RL A+ Y+L+ GK++R LV A F V Sbjct: 5 LEACKEAVNALLARLFEPTGLHA------RLKEAMNYSLMADGKRLRPALVIATAETFGV 58 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L AA+E IHCYSLIHDDLP MD+ +RRG+PT H+ + E A++AG+ LLT A Sbjct: 59 PRDRVLPAAAAVELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDALLTEA 118 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKT 185 F +++ P + + ++ +L G+ GM+GGQ +DI+ T V I KT Sbjct: 119 FHLLARPLEGVPAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVDFIHLHKT 178 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ E G A + L C+GE LG+ FQ+ DD+LD Sbjct: 179 ARLIQACVEIGGYFADLDDQVRWALSCYGECLGLAFQMIDDVLD 222 >gi|227878890|ref|ZP_03996795.1| geranyltranstransferase [Lactobacillus crispatus JV-V01] gi|256849774|ref|ZP_05555205.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus MV-1A-US] gi|262046527|ref|ZP_06019488.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus MV-3A-US] gi|227861524|gb|EEJ69138.1| geranyltranstransferase [Lactobacillus crispatus JV-V01] gi|256713263|gb|EEU28253.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus MV-1A-US] gi|260572976|gb|EEX29535.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus MV-3A-US] Length = 289 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 122/227 (53%), Gaps = 27/227 (11%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFL-VTECASLFNVNHLTALRV 75 I+DD L A H+ ++ D+ +S I Y+++ GGK++R L + +L +R+ Sbjct: 14 IIDDYL---AKHLASEVKDQKISQIMAYSVMAGGKRLRPLLFLATLNTLGKKIEEPEVRI 70 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 71 ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGS 130 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----------EFIDETQVFMIQKMKT 185 +QL+ +T +G GM+GGQ LDI +FI++ ++ +KT Sbjct: 131 NS------AQLVELITKAVGPNGMVGGQYLDIDSTNNASVSGDAKFINK-----MEWLKT 179 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G L+ + E AI A AS EK +L F + G +Q+ DDL+D E Sbjct: 180 GCLIQASVEMAAIFAKASDIEKVKLIDFAKVFGRSYQIYDDLVDVVE 226 >gi|18143445|dbj|BAB79600.1| crtE [Pantoea agglomerans pv. milletiae] Length = 303 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/195 (37%), Positives = 106/195 (54%), Gaps = 5/195 (2%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 AL GK+IR L+ A N A L + A+E +H SLI DD+P MD+ +RRG Sbjct: 49 ALAPGKRIRPLLLLLAARDLGCNATPAGLLDLACAVEMVHAASLILDDMPCMDDAQLRRG 108 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 +PT+H QY E AI+A LL+ AF ++++ + L R+ + L+H +G+QG++ GQ Sbjct: 109 RPTIHCQYGEHVAILAAVALLSKAFGVVAAAEG-LTATARADAVAELSHAVGMQGLVQGQ 167 Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D+ D+ + M KT L C + + +I+A AS +E+L F NLG F Sbjct: 168 FKDLSEGDKPRSADAILMTNHYKTSTLFCASMQMASIVAEASGEAREQLHRFSLNLGQAF 227 Query: 222 QLADDLLDCEEDLPK 236 QL DDL D D K Sbjct: 228 QLLDDLTDGMADTGK 242 >gi|15669051|ref|NP_247855.1| bifunctional short chain isoprenyl diphosphate synthase IdsA [Methanocaldococcus jannaschii DSM 2661] gi|2497457|sp|Q58270|IDSA_METJA RecName: Full=Bifunctional short chain isoprenyl diphosphate synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; AltName: Full=Geranyltranstransferase gi|1591545|gb|AAB98865.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Methanocaldococcus jannaschii DSM 2661] Length = 327 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 120/203 (59%), Gaps = 22/203 (10%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 +D+L +A ++ L GGK+IR +L L + L AA+E IH Y+LIHDD+ Sbjct: 32 DDKLYNASKHLLFAGGKRIRPYLTVVTYMLKKDDIEEVLPAAAAVELIHNYTLIHDDI-- 89 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN RRGKPTVH+ Y E AI+AG+ L AFE +S ++KDN ++ +L + Sbjct: 90 MDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAFEAVS----RIKDNKKAHEVLKILSKA 145 Query: 155 GLQGMLGGQMLDIQ--------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 ++ + GQ +D++ +E++D MI+K KTGAL+ + GA+MA ++ E Sbjct: 146 CVE-VCEGQAMDMEFENYYPTMEEYLD-----MIRK-KTGALLEASVGIGAVMADCNEEE 198 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 +E L+ + + +G+ FQ+ DD+LD Sbjct: 199 REALKEYAKRIGLTFQIQDDVLD 221 >gi|77409329|ref|ZP_00786032.1| geranyltranstransferase [Streptococcus agalactiae COH1] gi|77172061|gb|EAO75227.1| geranyltranstransferase [Streptococcus agalactiae COH1] Length = 290 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 114/198 (57%), Gaps = 10/198 (5%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L+ AI Y++ GGK+IR ++ E F V + V AA+E IH SLIHDDLP+MD Sbjct: 26 LIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYDVAAALEMIHTGSLIHDDLPAMD 85 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRG+ T H ++DE TA++AG+ L F+++ K K ++ +L+ L+ + G Sbjct: 86 NDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVV--KAGFKADVTVRLIELLSMSAGS 143 Query: 157 QGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM+GGQMLD++ E ID+ + I KTG L+ + + I+A S+ K +L Sbjct: 144 FGMVGGQMLDMKGENKVLSIDDLSLIHIN--KTGRLLAYPFXAAGILAEKSEEVKGKLHQ 201 Query: 213 FGENLGIIFQLADDLLDC 230 G +G FQ+ DD+LD Sbjct: 202 AGLLIGHAFQVRDDILDV 219 >gi|266620367|ref|ZP_06113302.1| geranyltranstransferase [Clostridium hathewayi DSM 13479] gi|288868039|gb|EFD00338.1| geranyltranstransferase [Clostridium hathewayi DSM 13479] Length = 295 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 122/226 (53%), Gaps = 9/226 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L+ ++ ++ +++ L + +T +L A+ Y++ GGK++R L+ E LF Sbjct: 7 LETRTREVEAVVERYLPAADGYQKT-----VLDAMNYSVRAGGKRLRPMLMEETYRLFGG 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AAIE IH SLIHDDLP MDN +RRG PT ++Y A++AG+ LL YA Sbjct: 62 SGTVVEPFMAAIEMIHTSSLIHDDLPCMDNDELRRGLPTTWVKYGYDMAVLAGDSLLIYA 121 Query: 128 FEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184 E + +D + + + L G+ GM+GGQ +D++ ++ + ++ I +K Sbjct: 122 VETAAKAFALTEDAAVVGRCIGILAQKTGIYGMIGGQTVDVELTNKPVPHEKLDFIYHLK 181 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 TGAL+ + GA++A A + E + +G+ FQ+ DD+LD Sbjct: 182 TGALLESSMMIGALLAGADEEETRLVEQMAAAIGLAFQIQDDILDV 227 >gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4] gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4] Length = 297 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 83/233 (35%), Positives = 128/233 (54%), Gaps = 11/233 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L+E +D LD L + + H ++RY++ GGK+IR L+ Sbjct: 3 LKAYLKERCTLVDEALDRFLPKADELPFSLHK-----SMRYSVFAGGKRIRPILMLAACD 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + A+ A+E IH YSLIHDDLP+MD+ RRG PT H + E AI+AG+ L Sbjct: 58 AVGGDISLAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAIAILAGDAL 117 Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 LT AF ++S P L +++ ++H G GM+GGQ++D++ E E + +Q Sbjct: 118 LTEAFILMSRVEPSASLPPEAVLRVIQEISHCAGSHGMVGGQVVDMESEGKAEMDLATVQ 177 Query: 182 KM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + KTGAL+ + ++GAI+ A + L +GE +G+ FQ+ADD+LD E Sbjct: 178 YIHTHKTGALIKASVKAGAILGGADEARLASLTTYGEAIGLAFQIADDILDIE 230 >gi|229552482|ref|ZP_04441207.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1] gi|258539852|ref|YP_003174351.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705] gi|229314219|gb|EEN80192.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1] gi|257151528|emb|CAR90500.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705] Length = 283 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 110/204 (53%), Gaps = 7/204 (3%) Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 + T N L +A+ Y++ GGK++R L+ ++++ AL A+E +H YSLI Sbjct: 19 QLATVANPHLRAAMAYSVDAGGKRLRPLLLLSIVAMYDGVVAEALPAATALEFVHTYSLI 78 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MDN +RRG+PT H Q+ E AI+AG+ LLT AF I+S Q + L+ Sbjct: 79 HDDLPAMDNDDLRRGQPTNHKQFGEALAILAGDALLTDAFAILS----QHYPEKGAALVQ 134 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L G GM+ GQ+LD+ E D + + + KTGAL+ G++ + + Sbjct: 135 ILAEAAGSSGMVAGQVLDMDGEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAIPEAD 194 Query: 207 KERLRCFGENLGIIFQLADDLLDC 230 + L F G+ FQ+ DD+ D Sbjct: 195 QVALADFAAAFGLGFQIKDDINDV 218 >gi|291544838|emb|CBL17947.1| farnesyl-diphosphate synthase [Ruminococcus sp. 18P13] Length = 297 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 117/202 (57%), Gaps = 5/202 (2%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 +T ++L A+RY+L GGK+IR LV + AL+ AIE IH YSLIHD Sbjct: 29 ETNPQAKVLEAMRYSLEAGGKRIRPLLVLAFCRACGGDVQKALKPALAIEMIHTYSLIHD 88 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP+MD+ RRG+ + H +DE TAI+AG+ L FE++S+ T L R L+ L Sbjct: 89 DLPAMDDDDYRRGRLSCHKAFDEATAILAGDALNVLPFELLST-DTTLPAETRVSLIAEL 147 Query: 151 THNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 + G +GM+GGQ++DI +E +D+ + + KTGAL+ AC G ++A A+ Sbjct: 148 ANAAGAEGMIGGQVIDIANETRTDVDQNNLVNMYAHKTGALIRVACTMGCMVAGANDKML 207 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 + + LG+ FQ+ DD+LD Sbjct: 208 TAATEYAQRLGLAFQIVDDILD 229 >gi|300508789|pdb|3NPK|A Chain A, The Crystal Structure Of Geranyltranstransferase From Campylobacter Jejuni gi|300508790|pdb|3NPK|B Chain B, The Crystal Structure Of Geranyltranstransferase From Campylobacter Jejuni Length = 291 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK R+ L+ L AL V A+E IH YSLIHDDLP+ DN RRG PT+ Sbjct: 38 GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAXDNADFRRGIPTL 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL G + GQ +D Sbjct: 98 HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGXVIGQAIDC 155 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ D Sbjct: 156 FFEDKRLSLNELEFLHTHKTARLIAAALKXGCEICELNNEESNQIYKLGLKLGLIFQIND 215 Query: 226 DLLDC 230 D++D Sbjct: 216 DIIDV 220 >gi|302387567|ref|YP_003823389.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1] gi|302198195|gb|ADL05766.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1] Length = 298 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 124/225 (55%), Gaps = 9/225 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L +K + +++ L + T +L+A+ Y++ GGK++R L+ E LF Sbjct: 10 LSARTKEVGLVVETYLPPVEGYQST-----VLAAMDYSVRAGGKRLRPMLMEETYRLFGG 64 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N AA+E IH SLIHDDLP MDN +RRG PT +++ A++AG+GLL Y+ Sbjct: 65 NGKEIEPFMAAMEMIHTSSLIHDDLPCMDNDTLRRGLPTAWVKFGYDMAVLAGDGLLIYS 124 Query: 128 FEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184 E + + + ++ ++ M L G+ GM+GGQ +D++ + I + ++ I ++K Sbjct: 125 METAAKALSMTDRPDLVARCMGILAEKTGIHGMIGGQTVDVELAGKPIPKEKLHFIYRLK 184 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 TGAL+ + GA++ A + + + + LG+ FQ+ DD+LD Sbjct: 185 TGALLEASMMIGALLGGADERQLKLVENMASCLGMAFQIQDDILD 229 >gi|319761830|ref|YP_004125767.1| polyprenyl synthetase [Alicycliphilus denitrificans BC] gi|317116391|gb|ADU98879.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC] Length = 297 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 120/197 (60%), Gaps = 6/197 (3%) Query: 41 SAIRYALL-GGKKIRSFLV-TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 +A+RYA+L GGK++R LV C ++ + ALR A+E IH YSL+HDD+P MDN Sbjct: 37 AAMRYAVLDGGKRLRPLLVLAACEAVGGLGQ-AALRAACAVELIHAYSLVHDDMPCMDND 95 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRGKPTVH+++ + A++AG+ L AFE++ +P+ + ++++L L G G Sbjct: 96 VLRRGKPTVHVRFGQAQALLAGDALQALAFELL-TPEDGVPPAMQARLCRLLAQAAGADG 154 Query: 159 MLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 M GGQ +D+ + + + Q+ + ++KTGAL+ + GA + ++ L +G Sbjct: 155 MAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGAACGEPAGVAEQALAQYGAA 214 Query: 217 LGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD +D Sbjct: 215 IGLAFQVVDDVLDVTQD 231 >gi|291545449|emb|CBL18557.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus sp. SR1/5] Length = 301 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 6/197 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + A+ Y++ GGK++R L+ E LF AA+E IH +SLIHDDLP++DN Sbjct: 38 MAEAMNYSMTAGGKRLRPILIRETYELFGGKDKLCEPFMAAMEMIHTHSLIHDDLPALDN 97 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIG 155 RRG+ T H Y E +++G LL A+E++ S T KD + + + + + G Sbjct: 98 DDYRRGRLTTHKVYGEAMGVLSGVALLNRAYEVMLSAFDLTGDKDRVIAAMRI-IADKTG 156 Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GMLGGQ +D++++ ++ + I K KT AL+ + +GA++A AS+ E + + Sbjct: 157 INGMLGGQSVDVENDGKPLEHKMLDYIYKNKTSALIEASMMTGAVLAGASEKELKVVEQA 216 Query: 214 GENLGIIFQLADDLLDC 230 EN+G+ FQ+ DD+LD Sbjct: 217 AENIGLAFQIQDDILDV 233 >gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501] gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501] Length = 295 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 82/237 (34%), Positives = 137/237 (57%), Gaps = 20/237 (8%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA-SLFNVNH 69 ++ ++ LDD L + + +L ++RY+ L+GGK++R L A SLF V Sbjct: 10 KAEAVNKALDDYL-----PAEDKKPAKLHQSMRYSTLMGGKRLRPVLTLIVANSLFGVEE 64 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + AA+E +H YSLIHDDLP MD+ RRG+ H + + A+++G+ LLTYAFE Sbjct: 65 ERIMPAAAAVELVHNYSLIHDDLPCMDDDDYRRGELANHKVFGDAIAVLSGDALLTYAFE 124 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDI--QDEFIDETQVFMIQKM 183 ++ T+L+ + ++ +L ++ + G +GM+GGQ D+ + + +++ + I + Sbjct: 125 LL----TKLEGDFTAEQILKVSKEVAQGAGFRGMVGGQAADMLAEGKAVEDIDLEFIHRY 180 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 KTGAL+ A +GAI+ A + E L + EN+G+ FQ+ DD+LD EE L K+ Sbjct: 181 KTGALLQAAVRTGAILGGADKEELAALTIYAENIGLSFQIIDDILDIVGDEEKLGKE 237 >gi|67633340|gb|AAY78591.1| predicted geranyltranstransferase [uncultured bacterium MedeBAC82F10] Length = 299 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 109/199 (54%), Gaps = 6/199 (3%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 S + + GGK+IR FL+T SL + A+EC+H +SLIHDDLP+MDN Sbjct: 40 SMVYFVKTGGKRIRPFLITTMGSLIGIKSQILNDFALAVECVHLHSLIHDDLPAMDNDDY 99 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGK TVH ++DE TA++AG+ + + + K+ L N + + + L+ GL+G++ Sbjct: 100 RRGKLTVHKKFDEATAVLAGDMFQVLSVKTLVDSKS-LSANQKVEAIQMLSKANGLEGLI 158 Query: 161 GGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ LDI + ++ V I+ M KTGAL + + + + L+ G+ + Sbjct: 159 AGQSLDIYMK--KKSSVKDIETMYLLKTGALFSLCFNLLLTVKKLNAQKAKDLKIIGDTI 216 Query: 218 GIIFQLADDLLDCEEDLPK 236 G IFQ+ DD+LD D K Sbjct: 217 GKIFQVTDDMLDRWGDEKK 235 >gi|26987266|ref|NP_742691.1| polyprenyl synthetase [Pseudomonas putida KT2440] gi|24981909|gb|AAN66155.1|AE016243_7 geranyltranstransferase [Pseudomonas putida KT2440] Length = 295 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 127/225 (56%), Gaps = 12/225 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+D L+ L + + + +RL +A+RY+++ GGK++R L A Sbjct: 12 RVDAALEPLFIAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQAN 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF + Sbjct: 67 GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLD 126 Query: 134 P--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189 P Q+ D+IR ++ L G GM+GGQ +D+ + +D+ + + + KTGAL+ Sbjct: 127 PCLSPQI-DSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALI 185 Query: 190 CFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ A A + + L+ + + +G+ FQ+ DD+LD E D Sbjct: 186 EASVRLGALASARAEPVQLDALQTYAQAIGLAFQVQDDILDVESD 230 >gi|209559666|ref|YP_002286138.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Streptococcus pyogenes NZ131] gi|209540867|gb|ACI61443.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Streptococcus pyogenes NZ131] Length = 221 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 116/199 (58%), Gaps = 6/199 (3%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L+ AI Y++ GGK+IR ++ E F V+ A + AA+E IH SLIHDDLP Sbjct: 23 SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Q+ E TAI+AG+ L F +I+ + +L ++ L+ L+ Sbjct: 83 AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + Q+ +I KTG L+ F ++ A++ + +++L Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200 Query: 212 CFGENLGIIFQLADDLLDC 230 G +G FQ+ DD+LD Sbjct: 201 QAGMLIGHAFQIRDDILDV 219 >gi|315616639|gb|EFU97256.1| geranyltranstransferase [Escherichia coli 3431] Length = 299 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 82/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ + AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGKANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|118498042|ref|YP_899092.1| geranyl diphosphate synthase/farnesyl diphosphate synthase [Francisella tularensis subsp. novicida U112] gi|194323267|ref|ZP_03057051.1| geranyltranstransferase [Francisella tularensis subsp. novicida FTE] gi|208779548|ref|ZP_03246893.1| geranyltranstransferase [Francisella novicida FTG] gi|254373397|ref|ZP_04988885.1| geranyltranstransferase [Francisella tularensis subsp. novicida GA99-3549] gi|254374860|ref|ZP_04990341.1| geranyltranstransferase [Francisella novicida GA99-3548] gi|118423948|gb|ABK90338.1| geranyl diphosphate synthase/farnesyl diphosphate synthase [Francisella novicida U112] gi|151571123|gb|EDN36777.1| geranyltranstransferase [Francisella novicida GA99-3549] gi|151572579|gb|EDN38233.1| geranyltranstransferase [Francisella novicida GA99-3548] gi|194322631|gb|EDX20111.1| geranyltranstransferase [Francisella tularensis subsp. novicida FTE] gi|208744509|gb|EDZ90808.1| geranyltranstransferase [Francisella novicida FTG] gi|332678764|gb|AEE87893.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida Fx1] Length = 293 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 108/198 (54%), Gaps = 11/198 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LLSA+ Y+ GGK+IR+ V ++ ++ A+E IH YSLIHDDLP+MDN Sbjct: 28 LLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKIAFAVESIHTYSLIHDDLPAMDN 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPT HI+++E TAI+AG+ L AFEI+ D ++ L G Sbjct: 88 DTLRRGKPTCHIKFNEATAILAGDALQALAFEILQDINYSDIDKLKKINKL-FAQYCGAS 146 Query: 158 GMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLR 211 GM+GGQ LDI+ E ++E Q+ K A M AC + +QN + + L Sbjct: 147 GMVGGQQLDIEGENKKLKLEELQILHTNKT---AKMFRACIVLPYILSQNQNSQIEDLLV 203 Query: 212 CFGENLGIIFQLADDLLD 229 + +G+ FQ+ DD+LD Sbjct: 204 RLSDLIGLCFQIKDDILD 221 >gi|220904228|ref|YP_002479540.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868527|gb|ACL48862.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 298 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 117/200 (58%), Gaps = 6/200 (3%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL ++ Y+L GGK++R L A+L + AL +AIE IH YSL+HDDLP+MD Sbjct: 35 RLKDSMLYSLQAGGKRLRPVLCLSAAALCGLPLRDALPFASAIEMIHTYSLVHDDLPAMD 94 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKP+ H +DE TAI+AG+GLLT AF ++ +R+ L+L G Sbjct: 95 DDDLRRGKPSNHKAFDEATAILAGDGLLTDAFLMMCRSPLAPPRVLRAISELALAA--GS 152 Query: 157 QGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+GGQ D+ + + + I MKTGAL+ +C GA++A AS + + + Sbjct: 153 SGMVGGQEWDMIFTGKDLVSIEDLRGIHAMKTGALLRASCVCGAMLAGASDEDLAAIGSY 212 Query: 214 GENLGIIFQLADDLLDCEED 233 G LG+ FQ+ADD+LD D Sbjct: 213 GAALGVAFQIADDILDVVAD 232 >gi|89901647|ref|YP_524118.1| polyprenyl synthetase [Rhodoferax ferrireducens T118] gi|89346384|gb|ABD70587.1| farnesyl-diphosphate synthase [Rhodoferax ferrireducens T118] Length = 314 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 117/206 (56%), Gaps = 12/206 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLV---TECAS-----LFNVNHLTALRVGAAIECIHCYSLIH 89 L++A+RYA+L GGK++R LV +E AS N + ALR A+E IH YSL+H Sbjct: 44 LMAAMRYAVLDGGKRLRPLLVLAASEAASGERPAAANTPEI-ALRAACAVELIHAYSLVH 102 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP MDN +RRGK TVH+++ E +A++AG+ L AFE+++ + ++ L Sbjct: 103 DDLPCMDNDVLRRGKATVHVKFGEASAMLAGDALQAMAFELLTPDDDAIPARQQAALCRL 162 Query: 150 LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G GM GGQ +D+ + E Q+ + ++KTGAL+ + GA S + Sbjct: 163 LARAAGSAGMAGGQAIDLASVGVALTERQLRQMHRLKTGALLQASVMMGAACGDVSAQAE 222 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L +G +G+ FQ+ DD+LD D Sbjct: 223 AALMSYGAAIGLAFQVVDDMLDVTAD 248 >gi|300361959|ref|ZP_07058136.1| geranyltranstransferase [Lactobacillus gasseri JV-V03] gi|300354578|gb|EFJ70449.1| geranyltranstransferase [Lactobacillus gasseri JV-V03] Length = 288 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 80/231 (34%), Positives = 128/231 (55%), Gaps = 27/231 (11%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL 70 + +ID L+D H+ ++ ++ + S I Y+++ GGK++R L A+L +N+ Sbjct: 11 TPQIDKFLED-------HLASEVDNPIFSKIMSYSVMAGGKRLRPLLF--LATLETLNYK 61 Query: 71 ---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL Sbjct: 62 ISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKM- 183 + I+ + L + ++ +G GM+GGQ LDI ++ + E V +I +M Sbjct: 122 IQWITEGSNS------AALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKEN-VKVIDQME 174 Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTG L+ + + A+ A AS ++ +RL F + G +Q+ DDL+D E Sbjct: 175 WLKTGCLIEASVKMAAVYAGASTDQVDRLDNFSKQFGRSYQIYDDLVDVVE 225 >gi|313897461|ref|ZP_07831004.1| geranyltranstransferase [Clostridium sp. HGF2] gi|312957831|gb|EFR39456.1| geranyltranstransferase [Clostridium sp. HGF2] Length = 280 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 8/206 (3%) Query: 29 SH-MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86 SH + T + R+ A++Y+L+ GGK+IR L+ + V AAIE IH YS Sbjct: 9 SHCLDTLEHSRVREAMQYSLMAGGKRIRPRLLLAVLRAYGFEETIGYPVAAAIEMIHTYS 68 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 LIHDDLP+MDN +RRG PT H+++ E AI+AG+ LLT AF ++ + + ++ Sbjct: 69 LIHDDLPAMDNDTLRRGMPTCHVKFGEDVAILAGDALLTQAF--YTAAACTCRAEVLVEI 126 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 + L+ G GM+ GQ+ D++ E ID + +I KTG L+ A++A Sbjct: 127 LKLLSEFSGANGMILGQIKDLEGEANPGIDHAGLQVIHYYKTGRLLSLPLVCAALLAGHR 186 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229 ++ R G + G+ FQ+ DD+LD Sbjct: 187 EDAAVWER-IGADTGLSFQIQDDILD 211 >gi|116618696|ref|YP_819067.1| farnesyl-diphosphate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097543|gb|ABJ62694.1| farnesyl-diphosphate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 304 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 114/204 (55%), Gaps = 22/204 (10%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L++ ++YA+L GGK++R L + F + + L+V AIE +H YSL+HDDLP+MD Sbjct: 32 LVAMMKYAVLNGGKRLRPLLTLAVVTSFGESITPSILKVATAIEWVHSYSLVHDDLPAMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNI 154 N RRGKP+VH Y E AI+ G+ LLT AF +I++ + ++D + ++ +L +T N+ Sbjct: 92 NDMFRRGKPSVHALYGEANAILVGDALLTGAFGVIATANSSCSVEDCLPTEELLLITQNL 151 Query: 155 ----GLQGMLGGQMLDIQDEFIDETQVFM------IQKMKTGALMCFACESGAIMAHASQ 204 G GM+ GQ+ D+ D +E + MKT AL+ + GAI+ H + Sbjct: 152 AREAGGSGMVLGQLHDM-DNHTEEQNASTNWLLNDVYSMKTAALIRYTTTLGAILTHQNV 210 Query: 205 N-------EKERLRCFGENLGIIF 221 N K+ + FGE G+ F Sbjct: 211 NVEDNHFDPKKAMYDFGEKFGLAF 234 >gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var. chinensis] Length = 207 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 98/157 (62%), Gaps = 4/157 (2%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SLIHDDLP MDN RRGKPT H + E TA++AG+ LL++AFE I+ ++ Sbjct: 2 AMEMIHTMSLIHDDLPRMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSK 61 Query: 138 LKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFAC 193 + R+ ++S L IG QG++GGQ++DI D +D + I KT L+ + Sbjct: 62 TVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSV 121 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 SG I+ A+++E R+R + +G++FQ+ DD+LD Sbjct: 122 VSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDV 158 >gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505] gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505] Length = 309 Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 113/200 (56%), Gaps = 5/200 (2%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + + + A+RY+LL GGK++R L + A+ A+E IH SLIHDDLP Sbjct: 41 YPETIYEAMRYSLLAGGKRVRPILCLATCEMIGGTIEMAMPTACAMEMIHTMSLIHDDLP 100 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTH 152 +MDN RRGK T H Y E AI+AG+GLL +F+++++ Q R+ +++ + Sbjct: 101 AMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALSFQLVATQTPQTVPPERTLRVIARMGS 160 Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G G++GGQ++D+ E I + I KT AL+ + G I+A A+ + ++ Sbjct: 161 ASGAPGLVGGQVVDLASEGQSNISLETLNFIHNHKTAALLEASVVCGGIIAGAAPQDIQK 220 Query: 210 LRCFGENLGIIFQLADDLLD 229 L + +N+G+ FQ+ DD+LD Sbjct: 221 LTRYSQNIGLAFQIIDDILD 240 >gi|262371871|ref|ZP_06065150.1| geranyltranstransferase [Acinetobacter junii SH205] gi|262311896|gb|EEY92981.1| geranyltranstransferase [Acinetobacter junii SH205] Length = 303 Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 123/204 (60%), Gaps = 14/204 (6%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L +A+ +A +LGGK++R L ASL N N A R A+E IHCYSL HDDLP Sbjct: 34 EPLKAAVHHAVMLGGKRVRPALCYAAASLQANQNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148 MDN +RRG+PT H+ + E TA++AG+ L + AFEI+ S + Q D + Q+ + Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEILGSRLFDDQAQGTDAAIVLKQMQI 153 Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 T + M+ GQ+LD+Q E + + ++ I + KTGAL+ A GA+ ++ ++ Sbjct: 154 LATAS---SKMVCGQVLDLQAEGKHVAQDELENIHRNKTGALIQAAIMMGAVTIYSGTDQ 210 Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229 +LR FG+++G+ FQ+ DD+LD Sbjct: 211 AIPKLRQFGQSIGLAFQVQDDILD 234 >gi|157165525|ref|YP_001467681.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP synthase) [Campylobacter concisus 13826] gi|112800771|gb|EAT98115.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Campylobacter concisus 13826] Length = 299 Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 26/207 (12%) Query: 49 GGKKIRSFLVTECASLFNVNH-LT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK R+ L+ NV+ LT A+RV +E +H YSLIHDDLPSMDN +RRG P Sbjct: 36 GGKHFRALLLLGVVE--NVDKSLTQKAMRVALGLEMMHTYSLIHDDLPSMDNASLRRGTP 93 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+H+ YDE TAI+AG+ L T+AF IS + L + R + + L+ N G+ GM+ GQ L Sbjct: 94 TLHVTYDETTAILAGDALNTHAFYEIS--RADLPADTRIKCVEILSQNAGVSGMVLGQAL 151 Query: 166 D-------------------IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 D + + + ++ + KT L+ + + GA++ + + E Sbjct: 152 DCFFENTNKEDIKRAKAKFGLSGKMLSLDELVFLHIHKTAKLIAASLKMGAVIVNLDEKE 211 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 +++ G LG+ FQ+ DD++D D Sbjct: 212 CDKIYDIGLKLGLAFQIQDDIIDLTSD 238 >gi|304384740|ref|ZP_07367086.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284] gi|304328934|gb|EFL96154.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284] Length = 297 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 123/230 (53%), Gaps = 9/230 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 + E +R +++D + ++ +H +L + Y+ GGK++R ++ + Sbjct: 7 EFNEFVRRSTPLINDHFAELMEKVE-KHQPQLARMMAYSFNAGGKRVRPLILLAILEVLG 65 Query: 67 --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 +N L V A+E +H YSLIHDDLP+MDN +RRG+PT H Q+ E AI+ G+ LL Sbjct: 66 EPINP-DVLTVAVALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKQFGEAEAILTGDALL 124 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQK 182 T AF+ +++ T +++ ++ L G +GM+ GQ+ DI+ T Q+ + + Sbjct: 125 TIAFQWLAA--TGFTAEVKATVIGDLAQAAGPEGMIAGQLQDIEGNHQRYTIEQLKKLHE 182 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTG ++ F ++ +A + F +N G+ FQ+ DD++D E Sbjct: 183 LKTGQMLIFPAKAALHIAKCETTVATAILRFVQNFGLAFQIHDDIIDVTE 232 >gi|311110938|ref|ZP_07712335.1| farnesyltranstransferase [Lactobacillus gasseri MV-22] gi|311066092|gb|EFQ46432.1| farnesyltranstransferase [Lactobacillus gasseri MV-22] Length = 288 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 78/230 (33%), Positives = 126/230 (54%), Gaps = 25/230 (10%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL 70 + +ID L+D H+ ++ ++ + S I Y+++ GGK++R L A+L +N+ Sbjct: 11 TPQIDKFLED-------HLASEVDNPIFSKIMSYSVMAGGKRLRPLLF--LATLETLNYK 61 Query: 71 ---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL Sbjct: 62 ISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ--VFMIQK 182 + I+ + L + ++ +G GM GGQ LDI ++ + E + ++ Sbjct: 122 IQWITEGSNS------AALAIIISQAVGPNGMGGGQYLDIDSTNNDLVKENAKVIDQMEW 175 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTG L+ + + A+ A AS +E +RL F + G +Q+ DDL+D E Sbjct: 176 LKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVE 225 >gi|289522987|ref|ZP_06439841.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503530|gb|EFD24694.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 298 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 84/231 (36%), Positives = 121/231 (52%), Gaps = 21/231 (9%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDR----LLSAIRYALL-GGKKIRSFLVTECAS 63 + ++IDT L+++L +ND L I Y+LL GGK+IR L A Sbjct: 10 FESKKEKIDTYLENIL----------NNDEIPEVLCQCIAYSLLNGGKRIRPVLCQITAE 59 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 ++ L + AAIE H SLIHDDLP MDN RRGK T H Y E A++AG+ L Sbjct: 60 KLGIDPDGVLPLAAAIEMAHTASLIHDDLPCMDNDDYRRGKLTNHKVYGEAMAVLAGDSL 119 Query: 124 LTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 L Y FE+ +L + NI + L + +H IG G+ GGQ LDI E + + F+ Sbjct: 120 LAYGFELCLQELPRLGFTQSNILNALKI-FSHAIGPCGICGGQALDITQEGHEGEEEFLW 178 Query: 181 Q--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + ++KT L+ + + A + A + L +G +LGI FQ+ DD+LD Sbjct: 179 KMCELKTATLLRASITASAALVGAGEKTMSCLHNYGTHLGISFQIIDDILD 229 >gi|229592837|ref|YP_002874956.1| geranyltranstransferase [Pseudomonas fluorescens SBW25] gi|229364703|emb|CAY52662.1| geranyltranstransferase [Pseudomonas fluorescens SBW25] Length = 295 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 125/227 (55%), Gaps = 10/227 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 + R++ L+ L + + M+ RL A+RY+++ GGK++R L Sbjct: 9 SQARVNAALEPLFVAPSPEMK-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGAPAE 63 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 64 QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGLQSLAFSA 123 Query: 131 ISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187 + P + + +R +++ +L H G GM+GGQ +D+ +D+ + + + KTGA Sbjct: 124 LLDPALSSVNAELRLRMVTALAHAAGPAGMVGGQAIDMGSVSLKLDQQALEHMHRHKTGA 183 Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ A GA+ + A + L+ + +G+ FQ+ DD+LD E D Sbjct: 184 LIEAAVHLGALASGRAEAPQLAALKTYALAIGLAFQVQDDILDVESD 230 >gi|167583904|ref|ZP_02376292.1| Polyprenyl synthetase [Burkholderia ubonensis Bu] Length = 294 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 106/200 (53%), Gaps = 5/200 (2%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RYA+LGG K++R L L AA+E IH YSL+HDD+P MD Sbjct: 31 QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH+QYDE TA++ G+ L + AF ++ + + L G Sbjct: 91 DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALAPAQQAALVR-ELALASGS 149 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213 GM GGQ +D+ + T Q+ + +MKTGAL+ A GA+ S + L + Sbjct: 150 IGMAGGQAIDLASVGMKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADAMAALDVY 209 Query: 214 GENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 210 AAAVGLAFQVVDDILDVTTD 229 >gi|256821709|ref|YP_003145672.1| polyprenyl synthetase [Kangiella koreensis DSM 16069] gi|256795248|gb|ACV25904.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069] Length = 296 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 88/231 (38%), Positives = 131/231 (56%), Gaps = 10/231 (4%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66 +L+ R+ IL+ L ++ Q+ H A+RY AL GGK+IR LV Sbjct: 6 QLEHWQDRVFKILNTRLPSDDTNPQSLHQ-----AMRYGALNGGKRIRPTLVYMTGQALG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A+E IHCYSL+HDDLP+MD+ +RRGKPT HIQ+ E TAI+AG+ L T Sbjct: 61 AELIDLDSPALAVELIHCYSLVHDDLPAMDDDDLRRGKPTCHIQFGEATAILAGDALHTQ 120 Query: 127 AFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM 183 AFE ++S P + + Q++ L G GM GGQ +D++ + ID + + +M Sbjct: 121 AFEELASHPFSAKAQPQQLQMIQLLAQASGSLGMGGGQAIDLESTSKIIDLATLEQMHRM 180 Query: 184 KTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ + GA+ A +Q E++ L + + +G+ FQ+ DD+LD E D Sbjct: 181 KTGALIKASVLLGALCAGKLNQLEQDALERYADAIGLAFQVKDDILDIESD 231 >gi|311030982|ref|ZP_07709072.1| Polyprenyl synthetase [Bacillus sp. m3-13] Length = 298 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 116/202 (57%), Gaps = 4/202 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL ++ Y+L GGK++R LV F + V A+E IH YSL+HDDLPSMD+ Sbjct: 35 LLESMNYSLKAGGKRLRPLLVLATLKSFGKPEELGMPVACAVEMIHTYSLVHDDLPSMDD 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 RRGKPT H + E AI+AG+ LLT++FE++ +K LM L G Sbjct: 95 DDFRRGKPTNHKVFGEAMAILAGDALLTHSFEVMEDLLNFDVKPMKVVTLMKELAKAAGP 154 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ+ D++ E + + I + KTG L+ F+ +GAI+ A++ + +L F Sbjct: 155 TGMVGGQVADMEGEGAQLSLQDLEYIHRNKTGKLLGFSIVAGAILGDATEEQISKLEQFA 214 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 ++LG+ FQ+ DD+LD E D K Sbjct: 215 DHLGLAFQIRDDILDIEGDAAK 236 >gi|270290381|ref|ZP_06196606.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4] gi|270281162|gb|EFA26995.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4] Length = 294 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 123/230 (53%), Gaps = 9/230 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 + E +R +++D + ++ +H +L + Y+ GGK++R ++ + Sbjct: 4 EFNEFVRRSTPLINDHFAELMEKVE-KHQPQLARMMAYSFNAGGKRVRPLILLAILEVLG 62 Query: 67 --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 +N L V A+E +H YSLIHDDLP+MDN +RRG+PT H Q+ E AI+ G+ LL Sbjct: 63 EPINP-DVLTVAVALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKQFGEAEAILTGDALL 121 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQK 182 T AF+ +++ T +++ ++ L G +GM+ GQ+ DI+ T Q+ + + Sbjct: 122 TIAFQWLAA--TGFTAEVKATVIGDLAQAAGPEGMIAGQLQDIEGNHQRYTIEQLKKLHE 179 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTG ++ F ++ +A + F +N G+ FQ+ DD++D E Sbjct: 180 LKTGQMLIFPAKAALHIAKCETTVATAILRFVQNFGLAFQIHDDIIDVTE 229 >gi|22536677|ref|NP_687528.1| geranyltranstransferase [Streptococcus agalactiae 2603V/R] gi|25010613|ref|NP_735008.1| hypothetical protein gbs0544 [Streptococcus agalactiae NEM316] gi|76787307|ref|YP_329231.1| geranyltranstransferase [Streptococcus agalactiae A909] gi|76799070|ref|ZP_00781262.1| geranyltranstransferase [Streptococcus agalactiae 18RS21] gi|77405325|ref|ZP_00782421.1| geranyltranstransferase [Streptococcus agalactiae H36B] gi|77412376|ref|ZP_00788686.1| geranyltranstransferase [Streptococcus agalactiae CJB111] gi|77414020|ref|ZP_00790192.1| geranyltranstransferase [Streptococcus agalactiae 515] gi|22533517|gb|AAM99400.1|AE014214_14 geranyltranstransferase, putative [Streptococcus agalactiae 2603V/R] gi|23094967|emb|CAD46188.1| Unknown [Streptococcus agalactiae NEM316] gi|76562364|gb|ABA44948.1| geranyltranstransferase [Streptococcus agalactiae A909] gi|76585585|gb|EAO62151.1| geranyltranstransferase [Streptococcus agalactiae 18RS21] gi|77159946|gb|EAO71085.1| geranyltranstransferase [Streptococcus agalactiae 515] gi|77161564|gb|EAO72565.1| geranyltranstransferase [Streptococcus agalactiae CJB111] gi|77176120|gb|EAO78893.1| geranyltranstransferase [Streptococcus agalactiae H36B] gi|319744560|gb|EFV96913.1| geranyltranstransferase [Streptococcus agalactiae ATCC 13813] Length = 290 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 114/198 (57%), Gaps = 10/198 (5%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L+ AI Y++ GGK+IR ++ E F V + V AA+E IH SLIHDDLP+MD Sbjct: 26 LIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYDVAAALEMIHTGSLIHDDLPAMD 85 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRG+ T H ++DE TA++AG+ L F+++ K K ++ +L+ L+ + G Sbjct: 86 NDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVV--KAGFKADVTVRLIELLSMSAGS 143 Query: 157 QGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM+GGQMLD++ E ID+ + I KTG L+ + + I+A S+ K +L Sbjct: 144 FGMVGGQMLDMKGENKVLSIDDLSLIHIN--KTGRLLAYPFVAAGILAEKSEEVKGKLHQ 201 Query: 213 FGENLGIIFQLADDLLDC 230 G +G FQ+ DD+LD Sbjct: 202 AGLLIGHAFQVRDDILDV 219 >gi|59802056|ref|YP_208768.1| hypothetical protein NGO1735 [Neisseria gonorrhoeae FA 1090] gi|240014983|ref|ZP_04721896.1| hypothetical protein NgonD_10150 [Neisseria gonorrhoeae DGI18] gi|240116586|ref|ZP_04730648.1| hypothetical protein NgonPID1_10193 [Neisseria gonorrhoeae PID18] gi|240122052|ref|ZP_04735014.1| hypothetical protein NgonPI_09860 [Neisseria gonorrhoeae PID24-1] gi|260439653|ref|ZP_05793469.1| hypothetical protein NgonDG_00928 [Neisseria gonorrhoeae DGI2] gi|268602255|ref|ZP_06136422.1| geranyltranstransferase [Neisseria gonorrhoeae PID18] gi|291042894|ref|ZP_06568635.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2] gi|293398096|ref|ZP_06642301.1| geranyltranstransferase [Neisseria gonorrhoeae F62] gi|59718951|gb|AAW90356.1| putative geranyltranstransferase [Neisseria gonorrhoeae FA 1090] gi|268586386|gb|EEZ51062.1| geranyltranstransferase [Neisseria gonorrhoeae PID18] gi|291013328|gb|EFE05294.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2] gi|291611359|gb|EFF40429.1| geranyltranstransferase [Neisseria gonorrhoeae F62] Length = 298 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGGAMADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT HI+Y E TA++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHIKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + + + + +KTGAL+ A GA S E L + L Sbjct: 158 GGQAIDLANVGKQMVQADLERMHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|313118274|sp|Q9LRR0|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8, chloroplastic; Short=GGPP synthase 8; Short=GGPS8; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8; AltName: Full=Dimethylallyltranstransferase 8; AltName: Full=Farnesyl diphosphate synthase 8; AltName: Full=Farnesyltranstransferase 8; AltName: Full=Geranyltranstransferase 8; Flags: Precursor Length = 361 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 115/197 (58%), Gaps = 11/197 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + TA+ A+E IH SLIHDDLP MDN + Sbjct: 97 AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 156 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H + E A++AG+ LL AFE ++SS + IR+ ++ L IG + Sbjct: 157 RRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRA--VVELARAIGTK 214 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQ++D+ E ++ V + I KT AL+ A GAIM ++ E E+LR Sbjct: 215 GLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRK 274 Query: 213 FGENLGIIFQLADDLLD 229 + +G++FQ+ DD+LD Sbjct: 275 YARCIGLLFQVVDDILD 291 >gi|257466439|ref|ZP_05630750.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|315917595|ref|ZP_07913835.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|313691470|gb|EFS28305.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 290 Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 6/205 (2%) Query: 33 TQHNDRLLSA--IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 TQ+N + A ++YA L GGK+IR L+ SL AA+E IH YSL+H Sbjct: 17 TQYNTPVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGKERDLGFPFAAALEMIHSYSLVH 76 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLML 148 DDLP+MDN RRG+ T H ++ E I+ G+ LLT AF + I ++ +++ Sbjct: 77 DDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNAFSVMIRGSMGKVAAEKILEIVA 136 Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + G+ GM+GGQ +D+ + I + I + KTG L+ I+ AS + Sbjct: 137 LFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHKTGRLLLLPILVACILGDASLEQ 196 Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231 +E L +G+ +G+ FQ+ DD+LD E Sbjct: 197 REALESYGKKIGLAFQIKDDILDVE 221 >gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis thaliana] Length = 306 Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 115/197 (58%), Gaps = 11/197 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + TA+ A+E IH SLIHDDLP MDN + Sbjct: 42 AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 101 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H + E A++AG+ LL AFE ++SS + IR+ ++ L IG + Sbjct: 102 RRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRA--VVELARAIGTK 159 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQ++D+ E ++ V + I KT AL+ A GAIM ++ E E+LR Sbjct: 160 GLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRK 219 Query: 213 FGENLGIIFQLADDLLD 229 + +G++FQ+ DD+LD Sbjct: 220 YARCIGLLFQVVDDILD 236 >gi|194099628|ref|YP_002002759.1| IspA [Neisseria gonorrhoeae NCCP11945] gi|239999827|ref|ZP_04719751.1| hypothetical protein Ngon3_10168 [Neisseria gonorrhoeae 35/02] gi|240017431|ref|ZP_04723971.1| hypothetical protein NgonFA_09768 [Neisseria gonorrhoeae FA6140] gi|240081573|ref|ZP_04726116.1| hypothetical protein NgonF_09730 [Neisseria gonorrhoeae FA19] gi|240118810|ref|ZP_04732872.1| hypothetical protein NgonPID_10204 [Neisseria gonorrhoeae PID1] gi|240124349|ref|ZP_04737305.1| hypothetical protein NgonP_10505 [Neisseria gonorrhoeae PID332] gi|240129023|ref|ZP_04741684.1| hypothetical protein NgonS_10439 [Neisseria gonorrhoeae SK-93-1035] gi|268595637|ref|ZP_06129804.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02] gi|268597669|ref|ZP_06131836.1| geranyltranstransferase [Neisseria gonorrhoeae FA19] gi|268604521|ref|ZP_06138688.1| geranyltranstransferase [Neisseria gonorrhoeae PID1] gi|268682976|ref|ZP_06149838.1| geranyltranstransferase [Neisseria gonorrhoeae PID332] gi|268687403|ref|ZP_06154265.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035] gi|193934918|gb|ACF30742.1| IspA [Neisseria gonorrhoeae NCCP11945] gi|268549026|gb|EEZ44444.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02] gi|268551457|gb|EEZ46476.1| geranyltranstransferase [Neisseria gonorrhoeae FA19] gi|268588652|gb|EEZ53328.1| geranyltranstransferase [Neisseria gonorrhoeae PID1] gi|268623260|gb|EEZ55660.1| geranyltranstransferase [Neisseria gonorrhoeae PID332] gi|268627687|gb|EEZ60087.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035] gi|317165116|gb|ADV08657.1| IspA [Neisseria gonorrhoeae TCDC-NG08107] Length = 298 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT HI+Y E TA++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHIKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + + + + + + +KTGAL+ A GA S E L + L Sbjct: 158 GGQAIDLANVGKQMVQADLERMHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|257462419|ref|ZP_05626833.1| dimethylallyltransferase [Fusobacterium sp. D12] gi|317060083|ref|ZP_07924568.1| geranyltranstransferase [Fusobacterium sp. D12] gi|313685759|gb|EFS22594.1| geranyltranstransferase [Fusobacterium sp. D12] Length = 290 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 6/210 (2%) Query: 33 TQHNDRLLSA--IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 Q+N + A ++YA L GGK+IR L+ +L L A+E IH YSL+H Sbjct: 17 AQYNTPVWIAEGMQYACLQGGKRIRPQLLFMSLALLGKEIALGLPFALALEMIHSYSLVH 76 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLML 148 DDLP+MDN RRG+ T H ++ E AI+ G+ LLT AF + + ++ +++ Sbjct: 77 DDLPAMDNDEYRRGQLTTHKKFGEANAILIGDALLTNAFSVMVRGSMGKVSSEKILEIVA 136 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + G+ GM+GGQ +D+ E I + I + KTG L+ I+ AS + Sbjct: 137 LFSEYAGVDGMIGGQAMDVAYEGKQISYKTLSFIHEHKTGRLLLLPILVACILGDASLEQ 196 Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++ L +G N+G+ FQ+ DD+LD E D + Sbjct: 197 RKALEIYGRNIGLAFQIKDDILDVEGDFTQ 226 >gi|88704428|ref|ZP_01102142.1| Geranyltranstransferase [Congregibacter litoralis KT71] gi|88701479|gb|EAQ98584.1| Geranyltranstransferase [Congregibacter litoralis KT71] Length = 269 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 81/203 (39%), Positives = 118/203 (58%), Gaps = 10/203 (4%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR--VGAAIECIHCYSLIHDDLPS 94 RL A Y+L + GK++R L+ A + AL AIE IH YSLIHDDLP+ Sbjct: 5 RLNDARSYSLNIPGKRLRPQLLEASARATGNDRAEALAGPSAEAIELIHTYSLIHDDLPA 64 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRG+PT+H+ +DE TAI+ G+GL AFE+I++ +L R +L+ L Sbjct: 65 MDDDDLRRGRPTLHVAFDEATAILVGDGLQAKAFELIANDD-ELSTEQRVRLIARLAKAA 123 Query: 155 GLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G GM+GGQ LDI+ D +D+ + I +KTGAL+ A G I+ +A+ + L Sbjct: 124 GFDGMVGGQGLDIEATNKDLSLDDLK--NIHALKTGALITAALVMGGIVGNATDAQLATL 181 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 GE +G+ FQ+ DD++D D Sbjct: 182 ETVGEKIGLAFQIIDDVIDVRSD 204 >gi|297616623|ref|YP_003701782.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297144460|gb|ADI01217.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 301 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 80/232 (34%), Positives = 128/232 (55%), Gaps = 12/232 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 +L + ++ + + + ++ Q H A+ YA+ GGK++R LV E A + Sbjct: 11 ELADKKAYVEKFMREFMPPENAYPQVIHR-----AMHYAVFNGGKRLRPILVLESAQVVG 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + AL V A+E IH YSL+HDDLP+MD+ +RRGKPT H + E AI+ G+ LLT Sbjct: 66 KDLTRALPVACAMEMIHSYSLVHDDLPAMDDDDLRRGKPTCHKVFGEANAILTGDALLTL 125 Query: 127 AFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183 AFEI++ + ++ ++++ +G GM+GGQ+LD++ E D T F ++ + Sbjct: 126 AFEIMTACAELPGMEPRYVAKVVRETARAVGSLGMVGGQVLDLELEGKD-TDFFTLKTLH 184 Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL +GA++ + L + EN G+ FQ+ DD+LD E D Sbjct: 185 SKKTGALFRACLRAGALLFGVEDERLQALTRYAENFGLAFQITDDILDVEGD 236 >gi|153870661|ref|ZP_02000013.1| Polyprenyl synthetase [Beggiatoa sp. PS] gi|152072868|gb|EDN69982.1| Polyprenyl synthetase [Beggiatoa sp. PS] Length = 296 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 82/223 (36%), Positives = 133/223 (59%), Gaps = 10/223 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 +R+++ LD L T +Q H L A+RY++ GGK++R LV + NVN ++ Sbjct: 12 QRVESALDTWLPMTT--IQPIH---LHEAMRYSVFNGGKRVRPLLVYLTGAALNVNPISL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +A+E IH YSL+HDDLP+MD+ +RRGKPT H +DE TAI+AG+ L T AF ++S Sbjct: 67 DAPASAVELIHAYSLVHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFYVLS 126 Query: 133 SPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189 Q D R +++ +L G +GM GGQ +D++ ++ ++ + KTGAL+ Sbjct: 127 HDNNLQNSDKRRLEMIETLALASGSRGMAGGQAIDMESVGRSLNVAELENMHIHKTGALI 186 Query: 190 CFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCE 231 + + GA+ + + N+ E+L + + +G+ FQ+ DD+LD E Sbjct: 187 RASVKMGALACNVIEVNQLEKLDHYAKCIGLAFQIQDDILDVE 229 >gi|117622682|ref|YP_851595.1| geranyltranstransferase [Escherichia coli APEC O1] gi|115511806|gb|ABI99880.1| geranyltranstransferase [Escherichia coli APEC O1] Length = 299 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 82/208 (39%), Positives = 118/208 (56%), Gaps = 13/208 (6%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209 G+ GM GGQ LD+ E + + I + KTGAL+ GA+ S +K R Sbjct: 148 ASGIAGMCGGQALDLDAEGKRVPLDALERIHRHKTGALIRATVRLGAL----SAGDKGRR 203 Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231 >gi|15231869|ref|NP_188069.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana] Length = 284 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 115/197 (58%), Gaps = 11/197 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + TA+ A+E IH SLIHDDLP MDN + Sbjct: 20 AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 79 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H + E A++AG+ LL AFE ++SS + IR+ ++ L IG + Sbjct: 80 RRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRA--VVELARAIGTK 137 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQ++D+ E ++ V + I KT AL+ A GAIM ++ E E+LR Sbjct: 138 GLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRK 197 Query: 213 FGENLGIIFQLADDLLD 229 + +G++FQ+ DD+LD Sbjct: 198 YARCIGLLFQVVDDILD 214 >gi|330959939|gb|EGH60199.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 295 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ L+ L + + RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALEGLFQAPSPEL-----TRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + HA Q L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGHADQPRLAALQVYARAIGLAFQVQDDILDVESD 230 >gi|300690860|ref|YP_003751855.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum PSI07] gi|299077920|emb|CBJ50559.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum PSI07] Length = 299 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 117/204 (57%), Gaps = 14/204 (6%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+RYA LG GK++R LV +L + V A+E IH YSL+HDD+P MD Sbjct: 32 RLHAAMRYASLGAGKRVRPLLVHAAGALGEASPDALDGVSCAVEMIHAYSLVHDDMPCMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151 + +RRG+PTVH YDE TA++AG+ L T AF +++ SP T R+ L+ L Sbjct: 92 DDDLRRGRPTVHRAYDEATALLAGDALQTQAFIMLAELGAVSPAT------RAVLVGELA 145 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKER 209 G GM GGQ +D+Q + +Q + + +MKTGAL+ + GA+ A + E+ Sbjct: 146 RASGSLGMAGGQAIDLQSVGVALSQEALETMHRMKTGALLRASLRMGALCAGVNAAALEQ 205 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD D Sbjct: 206 VDAYAGAVGLAFQVVDDILDVTAD 229 >gi|257452580|ref|ZP_05617879.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R] gi|317059120|ref|ZP_07923605.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R] gi|313684796|gb|EFS21631.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R] Length = 290 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 110/205 (53%), Gaps = 6/205 (2%) Query: 33 TQHNDRLLSA--IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 TQ+N + A ++YA L GGK+IR L+ SL AA+E IH YSL+H Sbjct: 17 TQYNTPVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGKERDLGFPFAAALEMIHSYSLVH 76 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLML 148 DDLP+MDN RRG+ T H ++ E I+ G+ LLT AF + + ++ +++ Sbjct: 77 DDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNAFSVMVRGSIGKVPSEKILEIVA 136 Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + G+ GM+GGQ +D+ + I + I + KTG L+ I+ AS + Sbjct: 137 LFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHKTGRLLLLPILVACILGDASLEQ 196 Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231 +E L +G+ +G+ FQ+ DD+LD E Sbjct: 197 REALESYGKKIGLAFQIKDDILDVE 221 >gi|241663625|ref|YP_002981985.1| polyprenyl synthetase [Ralstonia pickettii 12D] gi|240865652|gb|ACS63313.1| Polyprenyl synthetase [Ralstonia pickettii 12D] Length = 303 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 116/205 (56%), Gaps = 4/205 (1%) Query: 32 QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 +T RL +A+RYA LG GK++R L +L + + V A+E IH YSL+HD Sbjct: 26 ETVAPQRLHAAMRYATLGAGKRVRPLLAHAAGALGDASPAALDGVSCAVEMIHAYSLVHD 85 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+P MD+ +RRG+PTVH YDE TA++ G+ L T AF I+ + + R+QL+ L Sbjct: 86 DMPCMDDDDLRRGRPTVHRAYDEATALLVGDALQTQAF-ILLAELGAVSAPTRAQLVGEL 144 Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G GM GGQ +D+Q + +Q + + +MKTGAL+ + GA+ A + E Sbjct: 145 ARASGSLGMAGGQAIDLQSVGVALSQDALEAMHRMKTGALLRASLRMGALCAGLNAAALE 204 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD D Sbjct: 205 HVDTYAGAVGLAFQVVDDILDVTAD 229 >gi|323938606|gb|EGB34855.1| polyprenyl synthetase [Escherichia coli E1520] Length = 299 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 81/204 (39%), Positives = 116/204 (56%), Gaps = 5/204 (2%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ ++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT H+++ E AI+AG+ L T AF I+S ++ D R ++ L Sbjct: 88 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209 G+ GM GGQ LD+ E + + I + KTGAL+ A GA+ A Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGCRALPV 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + E++G+ FQ+ DD+LD D Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231 >gi|254262303|emb|CAZ90627.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter pulveris] Length = 312 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 12/227 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66 +LQ K I+ LD LL QT+ ND + A+R A L GK+IR L+ A Sbjct: 14 ELQSMRKTIENRLDSLL------PQTEENDLVTQAMRDATLAPGKRIRPLLMLLAARDLG 67 Query: 67 VN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 H L + A+E IH SL DD+P MDN +RRG+PT+H ++ E AI+A LL Sbjct: 68 CAPAHPGLLDLACAVEMIHAASLTLDDIPCMDNAAMRRGRPTIHRKFGENVAILAAVALL 127 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182 + AF ++SS + L D R+Q + L+ +G QG++ GQ D+++ E + Sbjct: 128 SKAFGVVSSAEG-LSDAGRAQAVSELSAAVGTQGLVKGQYQDLREGCEPRSTEAIHTTND 186 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KTG L + + AI A+AS + RLR F + G FQL DDL+D Sbjct: 187 LKTGVLFSASLQLAAIAANASVAARNRLRSFALDFGQAFQLLDDLID 233 >gi|242278215|ref|YP_002990344.1| polyprenyl synthetase [Desulfovibrio salexigens DSM 2638] gi|242121109|gb|ACS78805.1| Polyprenyl synthetase [Desulfovibrio salexigens DSM 2638] Length = 296 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/196 (38%), Positives = 121/196 (61%), Gaps = 13/196 (6%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + LL ++ Y+L+ GGK++R LV A + V + A++E IH YSLIHDDLP+M Sbjct: 29 ENLLESMEYSLMAGGKRLRPVLVLVWAQMLGVKKEAVMPFAASLEMIHTYSLIHDDLPAM 88 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRGKP+ H ++DE TAI+AG+GLLT AF ++ + + + +++ + G Sbjct: 89 DDDDLRRGKPSNHKKFDEATAILAGDGLLTEAFGFMAKADAPAEYVVEAISLMA--KSAG 146 Query: 156 LQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTGALMCFACESGAIMAH---ASQNEK 207 GM+GGQ++D+ +DE +V + MKTGAL+ AC+SGAI+A AS+++ Sbjct: 147 SPGMVGGQVVDMSYTGRDGVTLDELKV--MHSMKTGALILSACKSGAILAKGAGASEDDV 204 Query: 208 ERLRCFGENLGIIFQL 223 R +G +G+ FQ+ Sbjct: 205 RRAEEYGRLIGVAFQI 220 >gi|238752774|ref|ZP_04614243.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380] gi|238709032|gb|EEQ01281.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380] Length = 306 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 85/203 (41%), Positives = 121/203 (59%), Gaps = 5/203 (2%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L+ A+RY A+LGGK++R +LV +F ++ AAIECIH YSLIHDDLP+ Sbjct: 36 NSDLVKAMRYGAVLGGKRLRPYLVYATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPA 95 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153 MD+ +RRG+PT H+++ E AI+AG+ L T AF I+S + + D R ++ L H Sbjct: 96 MDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILSEAAMPDVADKDRLSMIAELAHA 155 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-L 210 G+ GM GGQ LD++ E I T + I + KTGAL+ A GA+ A A+ E L Sbjct: 156 SGVAGMCGGQALDLEAEARQISLTDLEQIHRHKTGALIRAAVRLGALAAGAAGREALPLL 215 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD D Sbjct: 216 DRYANAIGLAFQVQDDILDVIGD 238 >gi|207723747|ref|YP_002254145.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum MolK2] gi|206588951|emb|CAQ35913.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum MolK2] Length = 299 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 14/204 (6%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+RYA LG GK++R LV +L + V A+E IH YSL+HDD+P MD Sbjct: 32 RLHAAMRYATLGAGKRVRPLLVHAAGALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151 + +RRG+PTVH YDE TA++ G+ L T AF +++ SP T R+ L+ L Sbjct: 92 DDDLRRGRPTVHRAYDEATALLVGDALQTQAFVVLAELGAVSPVT------RAALVGELA 145 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G GM GGQ +D+Q + +Q + + +MKTGAL+ + GA+ A + E+ Sbjct: 146 RASGSLGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNAAALEQ 205 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD D Sbjct: 206 VDTYAGAVGLAFQVVDDILDVTAD 229 >gi|300703492|ref|YP_003745094.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum CFBP2957] gi|299071155|emb|CBJ42469.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum CFBP2957] Length = 299 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/199 (37%), Positives = 114/199 (57%), Gaps = 4/199 (2%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+RYA LG GK++R LV +L + V A+E IH YSL+HDD+P MD Sbjct: 32 RLHAAMRYATLGAGKRVRPLLVHAAGALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PTVH YDE TA++ G+ L T AF +++ + R+ L+ L G Sbjct: 92 DDDLRRGRPTVHRAYDEATALLVGDALQTQAFVVLAELGA-VSSVTRAALVGELARASGS 150 Query: 157 QGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM GGQ +D+Q + +Q + + +MKTGAL+ + GA+ A + E++ + Sbjct: 151 LGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNATALEQVDAYA 210 Query: 215 ENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 211 GAVGLAFQVVDDILDVTAD 229 >gi|309800468|ref|ZP_07694624.1| geranyltranstransferase [Streptococcus infantis SK1302] gi|308115909|gb|EFO53429.1| geranyltranstransferase [Streptococcus infantis SK1302] Length = 291 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 122/225 (54%), Gaps = 12/225 (5%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 QE +++ L+D + Q L +I Y++ GGK+IR +L+ E V Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESILYSVHAGGKRIRPYLLLEVLDSLQVP 57 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +V AA+E IH SLIHDDLP+MDN RRG+ T H Y E AI+AG+ L Sbjct: 58 ITQEHAQVAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKVYGEALAILAGDALFLDP 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 + +I+ + L + L+ +L+ G GM+ GQ+LD++ E ++ ++ I KT Sbjct: 118 YALIA--QADLPSQTKVDLIANLSLASGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 G L+ F ++ I+A +N +++L+ GE +G+ FQ+ DD+LD Sbjct: 176 GKLLSFPFQAAGIIAGLDENHQKQLKTVGELIGLAFQVRDDVLDV 220 >gi|239627502|ref|ZP_04670533.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239517648|gb|EEQ57514.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 303 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 123/215 (57%), Gaps = 8/215 (3%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL-TALRVGAAIEC 81 L++T ++ H +L A+ Y+++ GGK++R L+ E LF L + + AA+E Sbjct: 21 LIKTYLPEESGHQKTILEAMNYSMMTGGKRLRPMLMQEMCRLFTGCLLESVIPFMAAVEM 80 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKD 140 IH SL+HDDLP MD+ +RRGKP+ ++ E ++ G+ L+ YAFE +S +T + Sbjct: 81 IHTSSLVHDDLPCMDDDMMRRGKPSTWAEFGEDIGVLTGDALMMYAFETAASAFETSIDP 140 Query: 141 NIRSQL---MLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACES 195 + S++ M L G+ GM+GGQ +D++ I + ++ I ++KTGAL+ + Sbjct: 141 DELSRIGKAMGILARKTGVYGMIGGQTVDVELAGGPIPKDKLDFIYRLKTGALIEASMLI 200 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 GA++ A+ + + + +G+ FQ+ DD+LD Sbjct: 201 GAVLGGAADEDCKIVESLARKIGMAFQIQDDILDV 235 >gi|258543735|ref|ZP_05703969.1| geranyltranstransferase [Cardiobacterium hominis ATCC 15826] gi|258521019|gb|EEV89878.1| geranyltranstransferase [Cardiobacterium hominis ATCC 15826] Length = 315 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 86/229 (37%), Positives = 123/229 (53%), Gaps = 13/229 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 L RI+T L L + RL A+RYA LGG K++R+ L+ A F Sbjct: 32 PLARYQTRIETALSRALPPAGA--------RLADAMRYATLGGGKRLRAALLYATADDFG 83 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V + A+E IH YSLIHDDLP+MD+ +RRG+P+ H +DE TAI+AG+ L T Sbjct: 84 VPPDSVDAAACAVEAIHAYSLIHDDLPAMDDDDLRRGRPSTHRAFDEATAILAGDALNTL 143 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184 AF ++++ + L R + +L G GM+GGQM D+ + + Q+ I + K Sbjct: 144 AFALLAN--SPLPPATRLAQIQTLADAAGWAGMIGGQMGDMAATGKTLTLPQLQAIHRGK 201 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TGAL+ A GA+ A L GE+LGI +Q+ADD+LD + Sbjct: 202 TGALIRAALHLGALPAADYAAHAATLDELGEHLGIAYQIADDILDATAN 250 >gi|227432104|ref|ZP_03914116.1| possible geranyltranstransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352131|gb|EEJ42345.1| possible geranyltranstransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 304 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 113/204 (55%), Gaps = 22/204 (10%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L++ ++YA+L GGK++R L + F + + L+V AIE +H YSL+HDDLP MD Sbjct: 32 LVAMMKYAVLNGGKRLRPLLTLAVVTSFGESITPSILKVATAIEWVHSYSLVHDDLPVMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNI 154 N RRGKP+VH Y E AI+ G+ LLT AF +I++ + ++D + ++ +L +T N+ Sbjct: 92 NDMFRRGKPSVHALYGEANAILVGDALLTGAFGVIATANSSCSVEDCLPTEELLLITQNL 151 Query: 155 ----GLQGMLGGQMLDIQDEFIDETQVFM------IQKMKTGALMCFACESGAIMAHASQ 204 G GM+ GQ+ D+ D +E + MKT AL+ + GAI+ H + Sbjct: 152 AREAGGSGMVLGQLHDM-DNHTEEQNASTNRLLNDVYSMKTAALIRYTTTLGAILTHQNV 210 Query: 205 N-------EKERLRCFGENLGIIF 221 N K+ + FGE G+ F Sbjct: 211 NVEDNHFDPKKAMYDFGEKFGLAF 234 >gi|254518734|ref|ZP_05130790.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA] gi|226912483|gb|EEH97684.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA] Length = 291 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 120/209 (57%), Gaps = 6/209 (2%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + +N + + Y+L +GGK+IR L L+ N+ + + +AIE IH YSLIHD Sbjct: 23 KGSYNKIIYDSASYSLNIGGKRIRPILFLLTYGLYKENYKDVIEMASAIEMIHTYSLIHD 82 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LS 149 DLP MDN +RRG PT H ++ E A++AG+ LL A ++ K +K+ ++ L Sbjct: 83 DLPCMDNDDLRRGMPTNHKKFGENIAVLAGDMLLNEAMSLM--IKFSIKNGAKALLASRE 140 Query: 150 LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 + G +GM+GGQ++D+ +E I + ++ + KTG L+ + + AI+A A + + Sbjct: 141 IAEAAGPEGMIGGQIVDVINEGKLISKEELLYMHSKKTGELIRVSIIAAAILADAPKKDI 200 Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLPK 236 E L FG LG+ FQ+ DD+LD D+ K Sbjct: 201 EILNDFGLKLGLAFQIKDDILDITGDISK 229 >gi|294101849|ref|YP_003553707.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261] gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261] Length = 300 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 105/200 (52%), Gaps = 9/200 (4%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL ++ Y+L GGK++R L + A L + A+E +H SLIHDDLP+MD Sbjct: 35 RLWESMTYSLQAGGKRLRPILCVKAAESVGGEKEKVLPMALALEMVHTASLIHDDLPAMD 94 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS----QLMLSLTH 152 N +RRGKPT H+ Y + AI+AG+ LL +AFE S K + + Q + Sbjct: 95 NDSLRRGKPTNHMIYGDALAILAGDALLAWAFEY--SLKGLMDRGVPPSSIVQALSIFAQ 152 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERL 210 +G G+ GGQ+LD + F+ I KT L+ + +GAI+ ASQ Sbjct: 153 AVGPSGICGGQVLDTDPASFTSSLSFVANIALQKTAVLLQASLVTGAILGGASQEIAGAF 212 Query: 211 RCFGENLGIIFQLADDLLDC 230 +G +LG+ FQ+ DD+LD Sbjct: 213 GKYGRHLGLAFQIVDDILDV 232 >gi|146284017|ref|YP_001174170.1| geranyltranstransferase [Pseudomonas stutzeri A1501] gi|145572222|gb|ABP81328.1| geranyltranstransferase [Pseudomonas stutzeri A1501] Length = 295 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 127/225 (56%), Gaps = 10/225 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 +R+D L+ L + ++ RL A+RY+++ GGK++R LV N + +A Sbjct: 11 QRVDGCLEALFVPPLPQLE-----RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASA 65 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AFE ++ Sbjct: 66 DGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMA 125 Query: 133 SPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 + +D +R ++ L G GM+GGQ +D+ +D + ++ + KTGAL+ Sbjct: 126 QERHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALI 185 Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + GA+ + A + L + +G+ FQ+ DD+LD E D Sbjct: 186 EASVQLGALASGRADADNLASLSQYARAIGLAFQVQDDILDVESD 230 >gi|254674120|emb|CBA09904.1| geranyltranstransferase [Neisseria meningitidis alpha275] Length = 298 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 114/196 (58%), Gaps = 5/196 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA L GGK++R LV + L + AAIE IH YSL+HDD+P+MDN + Sbjct: 39 AMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H++Y E TA++ G+ L T AF+++S P T+L + ++ L G GM Sbjct: 99 RRGKPTCHVKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157 Query: 161 GGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217 GGQ +D+ + Q + Q +KTGAL+ A GA+ + S++ L + L Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LDCE D Sbjct: 218 GLAFQVIDDVLDCEAD 233 >gi|86136864|ref|ZP_01055442.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. MED193] gi|85826188|gb|EAQ46385.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. MED193] Length = 287 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 10/196 (5%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 +A+LGGK +R FLV E A L V+ AL AIECIH YSL+HDDLP MD+ +RRG Sbjct: 36 HAVLGGKMLRGFLVLESARLHGVDAEAALDAAVAIECIHAYSLVHDDLPCMDDDDLRRGL 95 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 PT+H ++DE TA++ G+ L T AF++++ K N +L+ L G GM+ GQM Sbjct: 96 PTIHKKWDEATAVLTGDALQTLAFDLLADSK--FGPNAL-ELIRLLARAAGRSGMVQGQM 152 Query: 165 LDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 LDI E Q+ +Q KTG L+ ++ G ++A ++ L + LG+ Sbjct: 153 LDIDAETASTPLTLEQITRLQDRKTGCLINWSATVGPVIAG---DDSRALWQYATALGLA 209 Query: 221 FQLADDLLDCEEDLPK 236 FQ+ADD+LD E D K Sbjct: 210 FQIADDILDIEGDAEK 225 >gi|226311927|ref|YP_002771821.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599] gi|226094875|dbj|BAH43317.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599] Length = 300 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 115/203 (56%), Gaps = 6/203 (2%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + L +++Y+L+ GGK++R LV + + A+E IH YSLIHDDLP+M Sbjct: 33 ENLYESMKYSLMAGGKRLRPMLVLAVLEALDKPIERGVAFAVALEMIHTYSLIHDDLPAM 92 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP---KTQLKDNIRSQLMLSLTH 152 D+ +RRGKPT H + E TAI+AG+ LLT AF I+ +T + L+ L Sbjct: 93 DDDDLRRGKPTNHKVFGEATAILAGDALLTRAFAYIAEAYMDRTDVSAATTVNLIAELGK 152 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G GM+GGQM DI+ E ++ Q+ I + KTG L+ A G +A AS+ + E L Sbjct: 153 RAGATGMVGGQMADIEGESKRLNLDQLEFIHRHKTGDLLIAALRGGGYLAEASEGQMEAL 212 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 +G +G+ FQ+ DD+L+ E D Sbjct: 213 TRYGVCIGLAFQIQDDILNVEGD 235 >gi|302670346|ref|YP_003830306.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio proteoclasticus B316] gi|302394819|gb|ADL33724.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio proteoclasticus B316] Length = 313 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 85/251 (33%), Positives = 125/251 (49%), Gaps = 29/251 (11%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M +L + + I+ IL L + + +T ++ A+ Y+LL GGK++R ++ Sbjct: 1 MGNDFNKRLADKAAHIEDILKAFLPKEEGYART-----VIEAMNYSLLAGGKRLRPMMIL 55 Query: 60 ECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 E LF + + AA+E IH YSL+HDDLP+MDN RRG+ T H Y A Sbjct: 56 EAYKLFAGNDADEKVVYPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHAVYGAGMA 115 Query: 117 IIAGNGLLTYAFEII---SSPKTQLK--DNIRSQLMLS----LTHNIGLQGMLGGQMLDI 167 +AG+GLL A+E + T L D S L+ L G+ GM+GGQ DI Sbjct: 116 TLAGDGLLNLAYETAINGAMRGTTLSDYDGDNSNRYLAALDILAGKAGIYGMVGGQCADI 175 Query: 168 ---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 +DE D + I + KTGAL+ + GA++ AS + + G N+G Sbjct: 176 CAENATEIPEDEMKD--TLHYIDENKTGALIEASLMIGAVIGGASAQQVSMMEKIGSNVG 233 Query: 219 IIFQLADDLLD 229 I FQ+ DD+LD Sbjct: 234 IAFQIQDDILD 244 >gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 378 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 105/194 (54%), Gaps = 8/194 (4%) Query: 42 AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GK++R L L + A+E IH SLI DDLP MDN + Sbjct: 117 AMRYAILAAGKRVRPILCLASCELVGGQENATIPAACAVEMIHTMSLIKDDLPCMDNDDL 176 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT Y E AI++G LL+ AFE +++ + + + + + L +IG +G++ Sbjct: 177 RRGKPTTDKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWA--VRELARSIGTRGLV 234 Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GQ +DI E +D +V + I KT L+ A GAI+ S E E +R F Sbjct: 235 AGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFAR 294 Query: 216 NLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 295 CIGLLFQVVDDILD 308 >gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01] gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01] Length = 307 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 117/204 (57%), Gaps = 6/204 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 R+ A+R++L GGK++R L A N + V AA+E IH YSLIHDDLP++D Sbjct: 42 RVTQAMRHSLFAGGKRLRPILCMTSAEAVGGNKDHVMDVAAALEFIHTYSLIHDDLPALD 101 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNI 154 + RRG PT H +DE TAI+AG+GLLT AFEI+S L ++ ++H Sbjct: 102 DDDYRRGTPTCHKAFDEATAILAGDGLLTSAFEILSHAADDGLLPAEKVLTIIAGISHAA 161 Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+ GQMLDI+ E + ++ I KTGA++ + SGA + + + L Sbjct: 162 GCNGMILGQMLDIEGEHESLTREELEDIHNNKTGAMIEVSVFSGAYLGGGTPEQIAALDV 221 Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236 + +N+G+ FQ+ DD+L+ D PK Sbjct: 222 YAKNVGLAFQVIDDILNVIGD-PK 244 >gi|237752529|ref|ZP_04583009.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis ATCC BAA-430] gi|229376018|gb|EEO26109.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis ATCC BAA-430] Length = 287 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 114/187 (60%), Gaps = 5/187 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R L+ + + V ++ A A+E +H YSLIHDDLP+MDN RRG T+ Sbjct: 40 GGKRFRPKLLLSIVASYKVENVKLAFAPALALEILHTYSLIHDDLPAMDNAPFRRGCVTL 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H +YDE AI+AG+GL T AF +I++ ++LK I+ +L+ SL++N G+ GM+ GQ LD Sbjct: 100 HKKYDEALAILAGDGLNTQAFYLIAT--SKLKPKIKIKLIESLSYNGGIYGMVLGQALDC 157 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + E + Q+ +I KT L+ + E GA++A + + L G +LG+ FQ+ D Sbjct: 158 HFEGEKLPLEQLRVIHLNKTAKLIAASFEMGAMIAECDKKTRRSLYQLGLDLGLFFQIRD 217 Query: 226 DLLDCEE 232 D++D + Sbjct: 218 DVIDSTQ 224 >gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196] gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196] Length = 297 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 16/205 (7%) Query: 37 DRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RL A+RY +LGG K++R L L N A+E IH YSL+HDDLP M Sbjct: 32 ERLHEAMRYTVLGGGKRVRPLLAFAAGELNKANEERVTIAAIAVELIHVYSLVHDDLPCM 91 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS------SPKTQLKDNIRSQLMLS 149 D+ +RRGKPT HI+Y E A++ G+ L + AF++++ +PK QL +++ Sbjct: 92 DDDVLRRGKPTCHIEYGEAIALLTGDSLQSLAFQLLAEYSLADTPKMQL------EMIRR 145 Query: 150 LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNE 206 L G +GM GGQ +D+ + ++ + KTGAL+ A GA + + + Sbjct: 146 LAQAAGSRGMAGGQAVDLASVGRTLSLPELEFMHIHKTGALIRAAVMLGAYCGSRLDEAQ 205 Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231 L F + +G+ FQ+ DD+LD E Sbjct: 206 LAALDHFAKCIGLAFQVVDDVLDAE 230 >gi|149909332|ref|ZP_01897988.1| geranyltranstransferase [Moritella sp. PE36] gi|149807649|gb|EDM67597.1| geranyltranstransferase [Moritella sp. PE36] Length = 296 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 89/234 (38%), Positives = 131/234 (55%), Gaps = 12/234 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 +L + R ++D L Q + + T H+ +L +A+ Y LL GGK+IR +V + Sbjct: 2 QLSNSITRYQGRINDYLQQQINLLPT-HDTQLAAAMEYGLLQGGKRIRPVIVYAVGEMLG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 VN AAIE IH YSLIHDDLP+MD+ +RRG+PT HI++D TAI+AG+ L + Sbjct: 61 VNLRDLDGPAAAIESIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDHATAILAGDALQPF 120 Query: 127 AFEII----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180 AFE++ +P+ + R ++ SLT G GM GGQ +D+ D+ I TQ+ I Sbjct: 121 AFEMLLDCALAPEAEKN---RFAMLKSLTQASGYSGMCGGQAMDLAATDKQISLTQLEAI 177 Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ A + G + + H S L + +G+ FQ+ DD+LD D Sbjct: 178 HNNKTGALINCAAKLGCLASPHCSIELLAALDKWSNAIGLAFQVQDDILDIISD 231 >gi|222055717|ref|YP_002538079.1| Polyprenyl synthetase [Geobacter sp. FRC-32] gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter sp. FRC-32] Length = 297 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 86/233 (36%), Positives = 129/233 (55%), Gaps = 11/233 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L S L+E + +D L+ L + H ++RY++ GGK+IR L+ Sbjct: 3 LKSYLKERCQLVDDALNRFLPLADDLPASLHK-----SMRYSIFAGGKRIRPILMLAACE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 N A+ A+E IH YSLIHDDLP+MD+ RRG PT H + E AI+AG+ L Sbjct: 58 AVGGNISQAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 LT AF ++S+ + Q++ ++ G +GM+GGQ++D++ E ID V Sbjct: 118 LTEAFILLSNLAAAPTVPPAALVQVIQEISCCAGSRGMVGGQVVDMESEGNAEIDLATVQ 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KTGAL+ + +SGA++ AS + E L +GE +G+ FQ+ADD+LD E Sbjct: 178 YIHTHKTGALIKASVKSGALLGGASSKDAESLTRYGEAIGLAFQIADDILDIE 230 >gi|254173046|ref|ZP_04879720.1| bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sp. AM4] gi|214033202|gb|EEB74030.1| bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sp. AM4] Length = 343 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 86/239 (35%), Positives = 125/239 (52%), Gaps = 20/239 (8%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECAS 63 L ++++ +K +D I+ +L+ + + +L A R Y L GGK++R F+V A Sbjct: 7 LFTRIKNLAKDVDKIILELVPE-------KDPKKLYEAARHYPLAGGKRVRPFVVLRAAE 59 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + AL AA+E IH YSL+HDD+ MD +RRG+PTVH + AI+AG+ L Sbjct: 60 AVGGDPEKALYPAAAVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGVNMAILAGDLL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + AFE I+ + + R +L T N + GQ LDI+ E DE V KM Sbjct: 118 FSKAFEAIAKAEVSPEKKARILEVLVKTSN----ELCEGQALDIEFETKDEVTVDEYLKM 173 Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 KTGAL + GAI+ ++ L +G N+GI FQ+ DD+LD EE L K Sbjct: 174 ISGKTGALFDGSATIGAIVGTDNEEYIRALSKWGRNVGIAFQIWDDVLDLIADEEKLGK 232 >gi|302874811|ref|YP_003843444.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] gi|307690572|ref|ZP_07633018.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] gi|302577668|gb|ADL51680.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] Length = 290 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 85/228 (37%), Positives = 127/228 (55%), Gaps = 11/228 (4%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 ID L++ + + +T ++ ++ Y+L +GGK+IR L SLF L Sbjct: 10 IDKWLENYFISKDGYEKTIYD-----SMSYSLNIGGKRIRPLLFLYTYSLFKDEIDDVLD 64 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + AIE IH YSLIHDDLP+MD+ +RRG PT HI+Y + AI+AG+GLL A I+ Sbjct: 65 IAGAIEMIHTYSLIHDDLPAMDDDDLRRGMPTNHIKYGDAIAILAGDGLLNEAMNIMFQY 124 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFA 192 + + + + ++ + G GM+ GQ++DI+ E I ++ + KTGAL+ A Sbjct: 125 CIESESQLAVKACSYISKSAGAAGMIAGQIVDIESEGKKISIEKLKYMHSKKTGALINAA 184 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 S AI+A A E E+L +G LG+ FQ+ DD+LD E L KK Sbjct: 185 IVSAAILAGADSTEIEKLSEYGTKLGLAFQIKDDVLDVIGDESKLGKK 232 >gi|297584556|ref|YP_003700336.1| polyprenyl synthetase [Bacillus selenitireducens MLS10] gi|297143013|gb|ADH99770.1| Polyprenyl synthetase [Bacillus selenitireducens MLS10] Length = 297 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/198 (39%), Positives = 118/198 (59%), Gaps = 4/198 (2%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L ++ Y+L GGK+IR L+ R AA+E IH YSLIHDDLP+M Sbjct: 33 DILKESMLYSLNAGGKRIRPVLLLSVLHAAGKPLEAGYRTAAALELIHTYSLIHDDLPAM 92 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRGKPT H Y E AI+AG+GLLT++F +IS + L +++ L+ +T G Sbjct: 93 DDDDLRRGKPTNHKVYGEDIAILAGDGLLTHSFNLISKDE-HLSADLKVALIADITDAAG 151 Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +GM+GGQ+ D+Q E + T ++ I KTG L+ + +G +A ++ + + L Sbjct: 152 PEGMVGGQVSDMQGEGKELTAEELEAIHHRKTGDLLSVSLMAGGKIAGLNEEDNKYLSLL 211 Query: 214 GENLGIIFQLADDLLDCE 231 G++LG+ FQ+ DDLLD E Sbjct: 212 GKHLGLAFQIKDDLLDIE 229 >gi|124003018|ref|ZP_01687869.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps) [Microscilla marina ATCC 23134] gi|123991668|gb|EAY31076.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps) [Microscilla marina ATCC 23134] Length = 323 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 119/225 (52%), Gaps = 12/225 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 I T+ D+ A +H L IRY + LGGK++R LV SLF+ NH A+ Sbjct: 3 IKTLQTDIHTALAGLQYGEHPVELYEPIRYIMSLGGKRMRPLLVLLGYSLFDDNHQKAMN 62 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 ++E H ++L+HDD+ MD +RRGKPT+H +++ T I++G+ +L A+E++ Sbjct: 63 AALSVEVFHNFTLVHDDI--MDEAPLRRGKPTIHQKWNTNTGILSGDVMLVQAYELLLDI 120 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCF 191 + + + N + GQ LD+ E ID E + ++KT L+ + Sbjct: 121 DSAHLKRVIGKF------NRCAAEVCEGQQLDMNFEHIDAVPEADYLNMIRLKTAVLLGY 174 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + E G I+A+A++ + L FG N+G+ FQL DDLLD D K Sbjct: 175 SLELGGIVANANKVAADLLNGFGVNIGVGFQLMDDLLDVYADAAK 219 >gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa] gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa] Length = 287 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/199 (37%), Positives = 112/199 (56%), Gaps = 3/199 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 QH ++ A+RY+LL GGK++R L L + A+ A+E IH SLIHDDL Sbjct: 19 QHPRKIHEAMRYSLLAGGKRVRPILCIASCELVGGDEELAMPTACALEMIHTMSLIHDDL 78 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRG PT H + E TA++AG+ LL AFE ++ + + Q + L Sbjct: 79 PCMDNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFEHVARNTKNVSSDRVVQALAELGS 138 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +G +G++ GQ++DI+ E + + + I KT L+ A GAIM A ERL Sbjct: 139 AVGSKGLVAGQVVDIESEGKEVSLSTLEYIHVHKTAKLLEAAVVCGAIMGGADATSVERL 198 Query: 211 RCFGENLGIIFQLADDLLD 229 R + ++G++FQ+ DD+LD Sbjct: 199 RKYARSIGLLFQVVDDILD 217 >gi|332295830|ref|YP_004437753.1| Polyprenyl synthetase [Thermodesulfobium narugense DSM 14796] gi|332178933|gb|AEE14622.1| Polyprenyl synthetase [Thermodesulfobium narugense DSM 14796] Length = 276 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 112/192 (58%), Gaps = 6/192 (3%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPS 94 D+ I Y++L GGK+IR + S N + + L+ A+E +HC SLIHDDLP+ Sbjct: 25 DKTKELIIYSVLSGGKRIRPIFLINVVSESNYDTMLGLKEAILALELMHCASLIHDDLPA 84 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +DN RRGK T+H +Y E AI+AG+ L F I+S+ + N+ +L+ L+ Sbjct: 85 IDNDDFRRGKLTLHKKYGEGPAILAGDALQIMPFNILSNIEDT---NLAVKLIKILSDKA 141 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G++GM+GGQ+LDI + + Q++ I +KTGAL + G ++ + + L G Sbjct: 142 GVKGMIGGQILDISN-IENFEQIYNIMALKTGALFEASLMMGGVVGRLEDKQIKNLEEIG 200 Query: 215 ENLGIIFQLADD 226 +++G++FQ+ DD Sbjct: 201 KSIGLLFQILDD 212 >gi|167573592|ref|ZP_02366466.1| geranyltranstransferase [Burkholderia oklahomensis C6786] Length = 294 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 116/224 (51%), Gaps = 10/224 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R++T L L +T +L A+RYA LGG K++R L L + Sbjct: 12 ERVETALGHYL-----PAETVAPAQLHEAMRYAALGGGKRVRPLLCHAAGELTGASEAAL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L + AF ++ Sbjct: 67 NAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVEYDEATALLVGDALQSQAFVALT 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190 L + + L+ L G GM GGQ +D+ + + + +MKTGAL+ Sbjct: 127 D-AAALPLDRQPALVRELALASGSIGMAGGQAIDLASVGHALSRDALETMHRMKTGALLR 185 Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 + GA+ + R L + +G+ FQ+ DD+LD D Sbjct: 186 ASVRMGALAGETPSEDAMRALDAYAAAVGLAFQVVDDILDVTTD 229 >gi|16519830|ref|NP_443950.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii NGR234] gi|2497460|sp|P55539|ISPA_RHISN RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|2182498|gb|AAB91752.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii NGR234] Length = 332 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/232 (34%), Positives = 125/232 (53%), Gaps = 14/232 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 +Q +KR++ L LL H +T+ L++A+RYA L GGK+ R+ L +L + Sbjct: 37 MQNGAKRVEQALARLLCAE-DHGETE----LMAAMRYATLHGGKRTRALLCLAAGALADT 91 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 VGAAIE +H +L+HDDLP+MD+ +RRG PTVH+++ E TAI+ G+ L +A Sbjct: 92 PAHILDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAHA 151 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185 F ++S DN R L+ L + +G GGQ +D+ + ++ ++ + +MK Sbjct: 152 FLTLASLDAP-GDN-RIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVAMHRMKC 209 Query: 186 GALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ A A L C + G+ Q+ DD+LD D Sbjct: 210 GALVRASVRMGALCAIAEDAADATLYCALDHYSACFGLALQVVDDILDATAD 261 >gi|84500607|ref|ZP_00998856.1| farnesyl diphosphate synthase [Oceanicola batsensis HTCC2597] gi|84391560|gb|EAQ03892.1| farnesyl diphosphate synthase [Oceanicola batsensis HTCC2597] Length = 286 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/196 (41%), Positives = 119/196 (60%), Gaps = 9/196 (4%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+R+A GGK++R+FLV E A+L V AL AAIE +H YSL+HDDLP+MD+ +R Sbjct: 31 AMRHATSGGKRLRAFLVCEGAALHGVAPGPALDAAAAIEAMHAYSLVHDDLPAMDDDDLR 90 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG+PTVH++++E TAI+ G+ L + AF+++S L + L + G GM+ Sbjct: 91 RGQPTVHVKWNEATAILVGDALQSLAFDLLS--HAALPADRVVTLTAGMARAAGGMGMVH 148 Query: 162 GQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ LDI E E Q+ +Q KTGAL+ ++ ++G IMA A + + L Sbjct: 149 GQALDIAAETAPEPLSLPQITELQARKTGALIEWSAQAGPIMADADPGP---MGAYARAL 205 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ADD+LD E D Sbjct: 206 GLAFQIADDILDVEGD 221 >gi|328472529|gb|EGF43392.1| geranyltranstransferase [Vibrio parahaemolyticus 10329] Length = 294 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 88/241 (36%), Positives = 132/241 (54%), Gaps = 20/241 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L S + N+++++ L+ L Q L+ A++Y LL GGK++R FLV Sbjct: 1 MQQTLTSFQERNNQQLNLWLEQLPYQ---------EQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFID 173 G+ L T AF II+ SP +N R ++ +L H+ G GM GQ LD+ ++ + Sbjct: 112 GDALQTLAFTIIADGTLSPSA---ENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVS 168 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232 ++ I + KTGAL+ A + GA+ A E L + + +G+ FQ+ DD+LD Sbjct: 169 LAEMEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIIS 228 Query: 233 D 233 D Sbjct: 229 D 229 >gi|222110169|ref|YP_002552433.1| polyprenyl synthetase [Acidovorax ebreus TPSY] gi|221729613|gb|ACM32433.1| Polyprenyl synthetase [Acidovorax ebreus TPSY] Length = 306 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/195 (37%), Positives = 113/195 (57%), Gaps = 4/195 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+L GGK++R LV N ALR A+E IH YSL+HDD+P MDN + Sbjct: 47 AMRYAVLDGGKRLRPLLVLAACEAVGGNAQAALRAACAVELIHAYSLVHDDMPCMDNDVM 106 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH+ + E A++AG+ L AFE++ +P+ + ++++L L G GM Sbjct: 107 RRGKPTVHVPFGEARALLAGDALQALAFELL-TPEDGVPPAMQARLCRELARAAGADGMA 165 Query: 161 GGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQ +D+ + E Q+ + ++KTGAL+ + GA+ + L +G +G Sbjct: 166 GGQAIDLASVGLQLSEDQLRQMHRLKTGALLQASVVMGAVCGQTPEGTLRALSDYGAAMG 225 Query: 219 IIFQLADDLLDCEED 233 + FQ+ DD+LD +D Sbjct: 226 LAFQVVDDVLDVTQD 240 >gi|139473477|ref|YP_001128193.1| geranyltranstransferase [Streptococcus pyogenes str. Manfredo] gi|134271724|emb|CAM29957.1| putative geranyltranstransferase [Streptococcus pyogenes str. Manfredo] Length = 290 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 123/212 (58%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 ++ L+ AI Y++ GGK+IR ++ E F V+ A + AA+E IH SLIHDDLP Sbjct: 23 SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H Q+ E TAI+AG+ L F +I+ + +L ++ L+ L+ Sbjct: 83 AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + +Q+ +I KTG L+ F ++ A++ + +++L Sbjct: 141 SGTFGMVGGQMLDMKGENQSLSLSQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200 Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237 G +G FQ+ DD+LD EDL PKK Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232 >gi|29654557|ref|NP_820249.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493] gi|29541825|gb|AAO90763.1| dimethylallyltransferase [Coxiella burnetii RSA 493] Length = 267 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 115/200 (57%), Gaps = 11/200 (5%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q RL A+ YA++ GGK+IR F V+ AIE +HCYSL+HDDL Sbjct: 24 QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDL 83 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MD+ RRGKP+ H +DE TAI+ G+ L AFE+++ K NIR L+ L + Sbjct: 84 PAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDK-----NIR--LINVLAN 136 Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209 G GM GGQ LD++ + + T Q+ ++ ++KTGAL A E GA+ A ++ ++ Sbjct: 137 ACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQK 196 Query: 210 LRCFGENLGIIFQLADDLLD 229 LR G +G+IFQ DDL D Sbjct: 197 LRKLGATVGLIFQWQDDLAD 216 >gi|296272236|ref|YP_003654867.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299] gi|296096411|gb|ADG92361.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299] Length = 286 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 114/184 (61%), Gaps = 5/184 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R L+ + N + +AL V +E +H YSL+HDDLP+MD+ +RRG T+ Sbjct: 37 GGKRFRPMLLLSVVNSKNSLLIKSALPVALGLEMLHTYSLVHDDLPAMDDATLRRGFETL 96 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H +YDEVTAI+ G+ L T AF I++ L +++ + + L+ + G+ GM+ GQ +D Sbjct: 97 HKKYDEVTAILVGDALNTEAFNKIAN--APLSSDVKIECIKVLSSDGGIDGMIIGQAIDC 154 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +++ ++ +Q+ + KT L+ + + GAI+A+ +E+L FG ++G++FQ+ D Sbjct: 155 FFENQKLELSQLEFLHIHKTAKLIAGSLKMGAIIANYDLAIQEKLYNFGIDIGLLFQIQD 214 Query: 226 DLLD 229 D+LD Sbjct: 215 DILD 218 >gi|262281218|ref|ZP_06059000.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202] gi|262257449|gb|EEY76185.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202] Length = 303 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 14/204 (6%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L SA+ +A +LGGK++R L ASL N N A R A+E IHCYSL HDDLP Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQSNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148 MDN +RRG+PT H+ + E TA++AG+ L + AFE++ S + Q D + Q+ + Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQI 153 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 T + M+ GQ+LD+Q E I + ++ I + KTGAL+ A GA+ + ++ Sbjct: 154 LATAS---SKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210 Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229 +LR +G+ +G+ FQ+ DD+LD Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILD 234 >gi|310642662|ref|YP_003947420.1| polyprenyl synthetase [Paenibacillus polymyxa SC2] gi|309247612|gb|ADO57179.1| Polyprenyl synthetase [Paenibacillus polymyxa SC2] Length = 303 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 85/228 (37%), Positives = 126/228 (55%), Gaps = 13/228 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75 D + L Q +H D L ++ Y+L GGK++R LV A F + AL V Sbjct: 18 DAVSSALTEQFPAHWDIP--DVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAALPV 75 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSP 134 A+E +H YSLIHDDLP+MD+ RRGK T H Y E A++AG+ LLT+AF I+ + Sbjct: 76 ACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYCIVQAG 135 Query: 135 KTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGAL 188 + + S +LS+ ++ G +GM+GGQ+ D+ E ++ I KT L Sbjct: 136 RLH---GVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKELEYIHLHKTADL 192 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + F+ +G +A A +++ E LRCFG +LG+ FQ+ DD+LD D K Sbjct: 193 IIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESK 240 >gi|258405879|ref|YP_003198621.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692] gi|257798106|gb|ACV69043.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692] Length = 292 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/199 (39%), Positives = 115/199 (57%), Gaps = 6/199 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L ++RY+LL GGK++R L A L + L + +ECIH YSL+HDDLP+MD+ Sbjct: 30 LYESMRYSLLAGGKRVRPVLCLVWAELLGGDRQAVLPFASGLECIHTYSLVHDDLPAMDD 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKP+ H Q+ E AI+AG+GLLT+AFE++ + +R+ +++ Sbjct: 90 DDLRRGKPSNHKQFGEAMAILAGDGLLTHAFELMLHADLPAERLVRAAGLVAGAAGASGM 149 Query: 158 GMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 Q+ DIQ T V + MKTGAL+ AC SGA++A A + + +R +G Sbjct: 150 IGG--QVTDIQLTGSGATNVEDLRAMHGMKTGALLQVACTSGAVLAGAIEEDIQRAATYG 207 Query: 215 ENLGIIFQLADDLLDCEED 233 LG+ FQ+ADD+LD D Sbjct: 208 GALGLAFQVADDILDVVGD 226 >gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110] gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110] Length = 309 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/203 (40%), Positives = 119/203 (58%), Gaps = 14/203 (6%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +++ A+RY+LL GGK++R L L +L A+E IH SLIHDDLP+M Sbjct: 44 EKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAM 103 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM---LSLTH 152 D+ RRGK T H Y E AI+AG+ LL+YAFE ++ TQ ++ + LM L Sbjct: 104 DDDDYRRGKLTNHKVYGEDIAILAGDALLSYAFEYVA---TQTRNVDLANLMNVIARLGR 160 Query: 153 NIGLQGMLGGQMLDIQDE-----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +G G++GGQ+LD++ E +D + I KTGAL+ + SGAI+A A Q + Sbjct: 161 TVGAAGLVGGQVLDLESEGKLDVTVDTLKFIHIH--KTGALLETSVVSGAILAGAKQEDV 218 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 ERL + +N+G+ FQ+ DD+LD Sbjct: 219 ERLSRYAQNIGLAFQIIDDILDV 241 >gi|254236932|ref|ZP_04930255.1| geranyltranstransferase [Pseudomonas aeruginosa C3719] gi|126168863|gb|EAZ54374.1| geranyltranstransferase [Pseudomonas aeruginosa C3719] Length = 295 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 124/224 (55%), Gaps = 10/224 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+D LD L + +Q RL A+RY+++ GGK++R L A Sbjct: 12 RVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRAD 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL AFE+++ Sbjct: 67 AAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD 126 Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190 + +++ ML+ L G GM+GGQ +D+ + D+ + ++ + KTGAL+ Sbjct: 127 TRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIE 186 Query: 191 FACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ + +++ L + E +G+ FQ+ DD+LD E D Sbjct: 187 ASVRLGALASGRAESASLAALERYAEAIGLAFQVQDDILDVESD 230 >gi|325123276|gb|ADY82799.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2] Length = 303 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 14/204 (6%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L SA+ +A +LGGK++R L ASL N N A R A+E IHCYSL HDDLP Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148 MDN +RRG+PT H+ + E TA++AG+ L + AFE++ S + Q D + Q+ + Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQI 153 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 T + M+ GQ+LD+Q E I + ++ I + KTGAL+ A GA+ + ++ Sbjct: 154 LATAS---SKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210 Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229 +LR +G+ +G+ FQ+ DD+LD Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILD 234 >gi|300173625|ref|YP_003772791.1| geranyltranstransferase [Leuconostoc gasicomitatum LMG 18811] gi|299888004|emb|CBL91972.1| geranyltranstransferase [Leuconostoc gasicomitatum LMG 18811] Length = 309 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 25/206 (12%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYI 100 + YA+L GGK++R L + F + L+V A+E +H YSL+HDDLP+MDN Sbjct: 36 MSYAVLNGGKRLRPMLTLAVVASFGQKITPSILKVATAVEWVHAYSLVHDDLPAMDNDLF 95 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN----IRSQLMLS--LTHNI 154 RRGKP+VH +Y E AI+ G+ LLT AF ++SS + +N + L+LS L+++ Sbjct: 96 RRGKPSVHARYGEAEAILVGDALLTGAFHVVSSANSTDTENENIAAKELLLLSQMLSYHA 155 Query: 155 GLQGMLGGQMLDI----QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNE--- 206 G GM+ GQ+ D+ Q+ ID + + KT AL+ F+ +G+ ++H + N Sbjct: 156 GAFGMVIGQVEDMKNHRQEAKIDVNWLLNDVYAPKTAALLGFSAIAGSRLSHVNSNSVAD 215 Query: 207 ---------KERLRCFGENLGIIFQL 223 L FG + G+ FQ+ Sbjct: 216 NSEIAISTTNSALLTFGTDFGMAFQI 241 >gi|162448166|ref|YP_001621298.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A] gi|161986273|gb|ABX81922.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A] Length = 278 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 121/205 (59%), Gaps = 8/205 (3%) Query: 29 SHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 ++++T +L +A+ YALLGG K+IR L V+ + A+E IH YSL Sbjct: 10 AYIETLPESKLKAAMAYALLGGGKRIRPMLGMTLLESKGVDPTPYIEAFLAVEMIHTYSL 69 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLP+MD+ +RRGKPTVHI +DE AI+AG+ LLT +F +++ K L + +++ Sbjct: 70 IHDDLPAMDDDTLRRGKPTVHIAFDEAIAILAGDALLTDSFRLVTQNK-YLSTLQKVEII 128 Query: 148 LSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACE-SGAIMAHASQ 204 ++ G GM+ GQ+ DI +D+ + + ++ ++KT L+ + +G I+ S Sbjct: 129 DIISSKAGSTGMVFGQIKDIESEDKMVTIEDLNLMYELKTANLIQASLMIAGVIL---SD 185 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 ++ + G +G+IFQ+ DD+L+ Sbjct: 186 HDIKSYEDLGYYIGLIFQIQDDILE 210 >gi|293610957|ref|ZP_06693256.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826609|gb|EFF84975.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 303 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 14/204 (6%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L SA+ +A +LGGK++R L ASL N N A R A+E IHCYSL HDDLP Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148 MDN +RRG+PT H+ + E TA++AG+ L + AFE++ S + Q D + Q+ + Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQI 153 Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 T + M+ GQ+LD+Q E I + ++ I + KTGAL+ A GA+ + ++ Sbjct: 154 LATAS---SKMVSGQVLDLQAEGKKITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210 Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229 +LR +G+ +G+ FQ+ DD+LD Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILD 234 >gi|49086036|gb|AAT51323.1| PA4043 [synthetic construct] Length = 296 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 10/224 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+D LD L + +Q RL A+RY+++ GGK++R L A Sbjct: 12 RVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRAD 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL AFE+++ Sbjct: 67 AAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD 126 Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190 + +++ ML+ L G GM+GGQ +D+ + D+ + ++ + KTGAL+ Sbjct: 127 TRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIE 186 Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ + A L + E +G+ FQ+ DD+LD E D Sbjct: 187 ASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESD 230 >gi|15599238|ref|NP_252732.1| geranyltranstransferase [Pseudomonas aeruginosa PAO1] gi|107103557|ref|ZP_01367475.1| hypothetical protein PaerPA_01004627 [Pseudomonas aeruginosa PACS2] gi|218889676|ref|YP_002438540.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58] gi|9950239|gb|AAG07430.1|AE004821_3 geranyltranstransferase [Pseudomonas aeruginosa PAO1] gi|218769899|emb|CAW25660.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58] Length = 295 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 10/224 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+D LD L + +Q RL A+RY+++ GGK++R L A Sbjct: 12 RVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRAD 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL AFE+++ Sbjct: 67 AAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD 126 Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190 + +++ ML+ L G GM+GGQ +D+ + D+ + ++ + KTGAL+ Sbjct: 127 TRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIE 186 Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ + A L + E +G+ FQ+ DD+LD E D Sbjct: 187 ASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESD 230 >gi|115379699|ref|ZP_01466777.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps) [Stigmatella aurantiaca DW4/3-1] gi|310821402|ref|YP_003953760.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1] gi|115363289|gb|EAU62446.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps) [Stigmatella aurantiaca DW4/3-1] gi|309394474|gb|ADO71933.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1] Length = 312 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 12/232 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66 +L E + + LD+ A H L +AIR ALL GK++R L E Sbjct: 22 RLHERQQLVARALDEHFPPGAGH--------LTAAIREALLADGKRLRPILCLEACEWVG 73 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + AL A+E IH +L+HDDLP+MD+ R G+P +H + E AI+AG+ LL + Sbjct: 74 GSVKAALPAACALEMIHKMTLVHDDLPAMDDAETRNGRPALHKVHGEALAILAGDALLVH 133 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 AF +++S + + + + + L +G G+ GGQ LD+ Q E + ++ + K Sbjct: 134 AFGLLASTRGVPAERV-TVAIRRLCQALGTTGLAGGQALDVLSQTEGVTPEKLDHVHTWK 192 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 T + A GA M A ++ E L +G LG FQ++DDLLD ++ K Sbjct: 193 TASFFEVAIVIGAEMGGADASQVEALARYGMLLGRAFQISDDLLDARDEKGK 244 >gi|72536059|gb|AAZ73127.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium DC260] Length = 301 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 113/202 (55%), Gaps = 8/202 (3%) Query: 34 QHNDRLLSAIRYALLG-GKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHD 90 Q +DR+ +A+R L GK+IR L+ A + L + A+E +H SLI D Sbjct: 34 QQSDRVRAAMRAGTLAQGKRIRPLLLLLAARDMGCELTQNGVLDLACAVEMVHAASLILD 93 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149 D+PSMDN +RRG+PTVH ++ E AI+A LL+ AFE+I+ +P L +S+ + Sbjct: 94 DIPSMDNAQMRRGRPTVHREFGENVAILAAIALLSRAFEVIAIAPG--LPAIHKSEAIAE 151 Query: 150 LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L+ +GLQG++ GQ D+ D + + M ++KT L + AI A AS + Sbjct: 152 LSAAVGLQGLVQGQFQDLHDGTQSRSPEAIAMTNELKTSVLFRATLQMAAIAADASPQVR 211 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 +RL F ++LG FQL DDL D Sbjct: 212 QRLSFFAQDLGQAFQLLDDLAD 233 >gi|15835530|ref|NP_297289.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia muridarum Nigg] gi|270285718|ref|ZP_06195112.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia muridarum Nigg] gi|270289727|ref|ZP_06196029.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia muridarum Weiss] gi|301337112|ref|ZP_07225314.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia muridarum MopnTet14] gi|7190945|gb|AAF39709.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia muridarum Nigg] Length = 292 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 11/205 (5%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + I YALLGG K++R LV A L A+E IH +LI DDLP MDN Sbjct: 29 LRNPIEYALLGGGKRVRPLLVCLFADSIQ-KRRDVLDTAIAVEYIHTSTLIADDLPCMDN 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH----- 152 +RRGKP+VH +DE +A++A L+ A+ I LK+ + Q + + Sbjct: 88 DDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKEVVSVQREIEDAYEDVLD 147 Query: 153 ----NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G++G+LGGQ D+ + E V I KT AL AC SG + ++ + Sbjct: 148 LIELRFGVEGVLGGQYEDVFFQSFTEESVINIINKKTSALFEIACVSGWLFGGGAREKTP 207 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 + F N GI+FQ+ DDL D +D Sbjct: 208 LVIEFARNFGILFQIGDDLADLSQD 232 >gi|253998309|ref|YP_003050372.1| polyprenyl synthetase [Methylovorus sp. SIP3-4] gi|253984988|gb|ACT49845.1| Polyprenyl synthetase [Methylovorus sp. SIP3-4] Length = 295 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 86/226 (38%), Positives = 132/226 (58%), Gaps = 15/226 (6%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL- 73 R++ +LDD+L A+++ RL A+RYA+LGG K L+ A F ++A+ Sbjct: 13 RMERVLDDIL--PAANIIPS---RLHGAMRYAVLGGGKRVRALLAHAAGEFCQAPISAVE 67 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + AA+E IH YSL+HDD+P MD+ +RRGKP+ H QYD+ TA++ G+ L T AF++++ Sbjct: 68 QSAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQTLAFKVLAE 127 Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMC 190 P L+D R M+ L G +GM GGQ +D+ +D TQ + Q KTGAL+ Sbjct: 128 PGL-LRDAARQLHMVHILAMASGSRGMAGGQAIDLASVGLDLTQTELEQMHIHKTGALIR 186 Query: 191 FACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEED 233 A GA A + +R++ + + +G+ FQ+ DD+LD E D Sbjct: 187 AAALLGA--ESADTVDADRIKAVDHYAQAIGLAFQVVDDILDSEAD 230 >gi|154707047|ref|YP_001424692.1| dimethylallyltransferase [Coxiella burnetii Dugway 5J108-111] gi|154356333|gb|ABS77795.1| dimethylallyltransferase [Coxiella burnetii Dugway 5J108-111] Length = 267 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 116/200 (58%), Gaps = 11/200 (5%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q RL A+ YA++ GGK+IR F V+ AIE +HCYSL+HDDL Sbjct: 24 QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDL 83 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MD+ RRGKP+ H +DE TAI+ G+ L AFE+++ +DN ++L+ L + Sbjct: 84 PAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLA------RDN-NTRLINVLAN 136 Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209 G GM GGQ LD++ + + T Q+ ++ ++KTGAL A E GA+ A ++ ++ Sbjct: 137 ACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQK 196 Query: 210 LRCFGENLGIIFQLADDLLD 229 LR G +G+IFQ DDL D Sbjct: 197 LRKLGATVGLIFQWQDDLAD 216 >gi|161830715|ref|YP_001597105.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331] gi|212212363|ref|YP_002303299.1| dimethylallyltransferase [Coxiella burnetii CbuG_Q212] gi|161762582|gb|ABX78224.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331] gi|212010773|gb|ACJ18154.1| dimethylallyltransferase [Coxiella burnetii CbuG_Q212] Length = 267 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/200 (39%), Positives = 114/200 (57%), Gaps = 11/200 (5%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q RL A+ YA++ GGK+IR F V+ AIE +HCYSL+HDDL Sbjct: 24 QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDL 83 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MD+ RRGKP+ H +DE TAI+ G+ L AFE+++ K ++L+ L + Sbjct: 84 PAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDKN-------TRLINVLAN 136 Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209 G GM GGQ LD++ + + T Q+ ++ ++KTGAL A E GA+ A ++ ++ Sbjct: 137 ACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQK 196 Query: 210 LRCFGENLGIIFQLADDLLD 229 LR G +G+IFQ DDL D Sbjct: 197 LRKLGATVGLIFQWQDDLAD 216 >gi|165921444|ref|ZP_02219632.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334] gi|165916759|gb|EDR35363.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334] Length = 267 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 116/200 (58%), Gaps = 11/200 (5%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q RL A+ YA++ GGK+IR F V+ AIE +HCYSL+HDDL Sbjct: 24 QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDL 83 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MD+ RRGKP+ H +DE TAI+ G+ L AFE+++ +DN ++L+ L + Sbjct: 84 PAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLA------RDN-NTRLINVLAN 136 Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209 G GM GGQ LD++ + + T Q+ ++ ++KTGAL A E GA+ A ++ ++ Sbjct: 137 ACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQK 196 Query: 210 LRCFGENLGIIFQLADDLLD 229 LR G +G+IFQ DDL D Sbjct: 197 LRKLGATVGLIFQWQDDLAD 216 >gi|237749332|ref|ZP_04579812.1| geranyltranstransferase [Oxalobacter formigenes OXCC13] gi|229380694|gb|EEO30785.1| geranyltranstransferase [Oxalobacter formigenes OXCC13] Length = 297 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 75/196 (38%), Positives = 117/196 (59%), Gaps = 6/196 (3%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++RYA+L GGK+IR LV LF+ L R AA+E IH YSL+HDD+P MDN + Sbjct: 39 SMRYAVLDGGKRIRPLLVFATGYLFDAEKLALARAAAAVEMIHAYSLVHDDMPCMDNDVL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH+++ E TA++AG+ L AF ++S+ Q + ++M L+ G GM Sbjct: 99 RRGKPTVHVRFGEATALLAGDALQAQAFVVLSN--QQCDPVLTVEMMRLLSEAAGAAGMC 156 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENL 217 GGQ +D+ + + ++ + ++KTGAL+ + GA + ++ EK L + + + Sbjct: 157 GGQAIDLASVGKSLTVNELENMHRLKTGALLTASVFLGAYCSKIPTEQEKNALNAYAKAI 216 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LD D Sbjct: 217 GLAFQVVDDILDVTAD 232 >gi|74316898|ref|YP_314638.1| farnesyl-diphosphate synthase [Thiobacillus denitrificans ATCC 25259] gi|74056393|gb|AAZ96833.1| polyprenyl synthetase [Thiobacillus denitrificans ATCC 25259] Length = 296 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 3/197 (1%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+LGG K++R L + AA+E IH YSL+HDD+P+MD Sbjct: 33 RLHEAMRYAVLGGGKRVRPLLAFAAGDVTGAAVEQVQHAAAAVELIHAYSLVHDDMPAMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPTVH+++DE TA++ G+ L + AF+I++SP + + ++ L G Sbjct: 93 DDALRRGKPTVHVEFDEPTALLVGDALQSLAFDILASPGLAQAASTQLAMVQLLARASGS 152 Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +GM GGQ +D+ + + +D T++ + KTGAL+ + GA S+ + L + Sbjct: 153 RGMAGGQAIDLANVGKSLDLTELEFMHIHKTGALIRASVLLGAECGTLSEPARTALDHYA 212 Query: 215 ENLGIIFQLADDLLDCE 231 + +G+ FQ+ DD+LD E Sbjct: 213 KCIGLAFQVVDDVLDAE 229 >gi|327482340|gb|AEA85650.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166] Length = 295 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 126/225 (56%), Gaps = 10/225 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 +R+D L+ L + ++ RL A+RY+++ GGK++R LV N + A Sbjct: 11 QRVDGCLEALFVPPLPQLE-----RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKTDA 65 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AFE ++ Sbjct: 66 DGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMA 125 Query: 133 SPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 + +D +R ++ L G GM+GGQ +D+ +D + ++ + KTGAL+ Sbjct: 126 QAEHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALI 185 Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + GA+ + A + L + +G+ FQ+ DD+LD E D Sbjct: 186 EASVQLGALASGRADADNLASLSQYARAIGLAFQVQDDILDVESD 230 >gi|256851326|ref|ZP_05556715.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii 27-2-CHN] gi|260660750|ref|ZP_05861665.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii 115-3-CHN] gi|282933229|ref|ZP_06338616.1| geranyltranstransferase [Lactobacillus jensenii 208-1] gi|297206196|ref|ZP_06923591.1| geranyltranstransferase [Lactobacillus jensenii JV-V16] gi|256616388|gb|EEU21576.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii 27-2-CHN] gi|260548472|gb|EEX24447.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii 115-3-CHN] gi|281302733|gb|EFA94948.1| geranyltranstransferase [Lactobacillus jensenii 208-1] gi|297149322|gb|EFH29620.1| geranyltranstransferase [Lactobacillus jensenii JV-V16] Length = 288 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 78/227 (34%), Positives = 122/227 (53%), Gaps = 22/227 (9%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLT 71 ++ I+D L Q H+ ++ D+ S I Y+++ GGK++R L A+L ++ Sbjct: 9 QKYQPIIDHYLEQ---HLSSEIEDKKFSQIMAYSVMAGGKRLRPLLF--LATLISLGKEI 63 Query: 72 A---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 +RV IE IH YSLIHDDLP+MDN RRG T H ++ E AI+AG+ LL Sbjct: 64 TEKEIRVACGIELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAILAGDALLPMGL 123 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM--IQKM 183 E I+S + ++++ + + IG GM GGQ LDI ++ + E F+ ++ + Sbjct: 124 EWIASAEN-------AEMVAVMANAIGPNGMAGGQYLDIDSTNNDAVKEDNNFINRMEWL 176 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + E I A A +++L F N G +Q+ DDL+D Sbjct: 177 KTGCLIKASVEIATIYAKADDLSRKKLVDFSANFGRAYQIYDDLVDV 223 >gi|157369322|ref|YP_001477311.1| geranyltranstransferase [Serratia proteamaculans 568] gi|157321086|gb|ABV40183.1| Polyprenyl synthetase [Serratia proteamaculans 568] Length = 306 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 84/201 (41%), Positives = 120/201 (59%), Gaps = 13/201 (6%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSM 95 +++A+R+ ALLGGK++R FLV +F V N+L A AA+ECIH YSLIHDDLP+M Sbjct: 39 MVAAMRHGALLGGKRLRPFLVYTTGQMFGVSLNNLDA--PAAAVECIHAYSLIHDDLPAM 96 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTH 152 D+ +RRG+PT HI++ E AI+AG+ L T AF I++ P L D R ++ L Sbjct: 97 DDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADAEMPDVALCD--RLAMVSELAT 154 Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209 G+ GM GGQ LD+ +D I + I + KTGAL+ A GA+ A + + Sbjct: 155 ASGVAGMCGGQSLDLEAEDRQIGLEALEQIHRHKTGALIRAAVRLGALAAGEPGRAALVQ 214 Query: 210 LRCFGENLGIIFQLADDLLDC 230 L + +G+ FQ+ DD+LD Sbjct: 215 LDRYAAAIGLAFQVQDDILDV 235 >gi|169794893|ref|YP_001712686.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii AYE] gi|213157703|ref|YP_002320501.1| polyprenyl synthetase [Acinetobacter baumannii AB0057] gi|215482441|ref|YP_002324625.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB307-0294] gi|301347512|ref|ZP_07228253.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB056] gi|301512686|ref|ZP_07237923.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB058] gi|301597254|ref|ZP_07242262.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB059] gi|332855972|ref|ZP_08436103.1| polyprenyl synthetase [Acinetobacter baumannii 6013150] gi|332870742|ref|ZP_08439424.1| polyprenyl synthetase [Acinetobacter baumannii 6013113] gi|169147820|emb|CAM85683.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii AYE] gi|193078216|gb|ABO13173.2| geranyltranstransferase [Acinetobacter baumannii ATCC 17978] gi|213056863|gb|ACJ41765.1| polyprenyl synthetase [Acinetobacter baumannii AB0057] gi|213985840|gb|ACJ56139.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB307-0294] gi|332727208|gb|EGJ58659.1| polyprenyl synthetase [Acinetobacter baumannii 6013150] gi|332732037|gb|EGJ63312.1| polyprenyl synthetase [Acinetobacter baumannii 6013113] Length = 303 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 14/204 (6%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L SA+ +A +LGGK++R L ASL N N A R A+E IHCYSL HDDLP Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148 MDN +RRG+PT H+ + E TA++AG+ L + AFE++ S + Q D + Q+ + Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 T + M+ GQ+LD+Q E I + ++ I + KTGAL+ A GA+ + ++ Sbjct: 154 LATAS---SKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210 Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229 +LR +G+ +G+ FQ+ DD+LD Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILD 234 >gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917] gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917] Length = 315 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 117/205 (57%), Gaps = 3/205 (1%) Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + + + + L A+RY+LL GGK++R L L + A+ A+E IH SL Sbjct: 39 ASLPPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDPALAMPTAVALEMIHTMSL 98 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLP+MD+ +RRG+PT H Y E AI+AG+ LLT AFE+++ + Q++ Sbjct: 99 IHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSPGVPAERLLQVV 158 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 L+ G G++GGQ++D++ E +D + I KTGAL+ +GA++A A + Sbjct: 159 AELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTGALLRACVITGALIAGADAS 218 Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230 + LR + +G+ FQ+ DD+LD Sbjct: 219 RIDSLRTYARGIGLAFQIVDDILDV 243 >gi|184159332|ref|YP_001847671.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii ACICU] gi|332874228|ref|ZP_08442150.1| polyprenyl synthetase [Acinetobacter baumannii 6014059] gi|183210926|gb|ACC58324.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii ACICU] gi|322509243|gb|ADX04697.1| Geranyltranstransferase [Acinetobacter baumannii 1656-2] gi|323519272|gb|ADX93653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii TCDC-AB0715] gi|332737587|gb|EGJ68492.1| polyprenyl synthetase [Acinetobacter baumannii 6014059] Length = 303 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 14/204 (6%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L SA+ +A +LGGK++R L ASL N N A R A+E IHCYSL HDDLP Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148 MDN +RRG+PT H+ + E TA++AG+ L + AFE++ S + Q D + Q+ + Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 T + M+ GQ+LD+Q E I + ++ I + KTGAL+ A GA+ + ++ Sbjct: 154 LATAS---SKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210 Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229 +LR +G+ +G+ FQ+ DD+LD Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILD 234 >gi|260548951|ref|ZP_05823173.1| polyprenyl synthetase [Acinetobacter sp. RUH2624] gi|260557259|ref|ZP_05829475.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606] gi|260408119|gb|EEX01590.1| polyprenyl synthetase [Acinetobacter sp. RUH2624] gi|260409365|gb|EEX02667.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606] Length = 303 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 14/204 (6%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L SA+ +A +LGGK++R L ASL N N A R A+E IHCYSL HDDLP Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148 MDN +RRG+PT H+ + E TA++AG+ L + AFE++ S + Q D + Q+ + Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 T + M+ GQ+LD+Q E I + ++ I + KTGAL+ A GA+ + ++ Sbjct: 154 LATAS---SKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210 Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229 +LR +G+ +G+ FQ+ DD+LD Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILD 234 >gi|309775474|ref|ZP_07670476.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53] gi|308916770|gb|EFP62508.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53] Length = 282 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 110/196 (56%), Gaps = 7/196 (3%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 R+ A++Y+L+ GGK++R L+ + + + AAIE IH YSLIHDDLP+MD Sbjct: 21 RVRDAMQYSLMAGGKRVRPKLLLAVLNAYAQEEAIGYPLAAAIEMIHTYSLIHDDLPAMD 80 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG T H++Y E AI+AG+GLLTYAF + KT + ++ L+ G Sbjct: 81 NDTLRRGMATCHVKYGEDVAILAGDGLLTYAFA--QAMKTACPADELVEICRLLSDYSGA 138 Query: 157 QGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+ GQ+ D++ E ID + I KTG L+ GA++A + + Sbjct: 139 GGMILGQIKDLEGEANPHIDLQSLQDIHFYKTGKLLTLPLLCGALLA-GHKADLPVWEMI 197 Query: 214 GENLGIIFQLADDLLD 229 G ++G+ FQ+ DD+LD Sbjct: 198 GADIGLSFQIQDDILD 213 >gi|255318787|ref|ZP_05360013.1| geranyltranstransferase [Acinetobacter radioresistens SK82] gi|262378949|ref|ZP_06072106.1| geranyltranstransferase [Acinetobacter radioresistens SH164] gi|255304043|gb|EET83234.1| geranyltranstransferase [Acinetobacter radioresistens SK82] gi|262300234|gb|EEY88146.1| geranyltranstransferase [Acinetobacter radioresistens SH164] Length = 302 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 117/200 (58%), Gaps = 7/200 (3%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L SA+ +A +LGGK++R L A+L N N R AIE IHCYSL HDDLP Sbjct: 34 EPLKSAVYHAVMLGGKRVRPALCYATAALQPNSNFAAVRRAAVAIEMIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN +RRG+PT H+ + E TA++AG+ L + AFE++ S + ++L + Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDQGVAVDQAVVLRQMQIL 153 Query: 155 GLQG--MLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKER 209 M+ GQ++D+Q E +D++Q+ I + KTGAL+ A A+ + + + + Sbjct: 154 ATASSKMVCGQVMDLQAEGKQVDQSQLENIHRNKTGALIQAAIMMAAVTIFNGTDQAIPQ 213 Query: 210 LRCFGENLGIIFQLADDLLD 229 LR +G+ +G+ FQ+ DD+LD Sbjct: 214 LRQYGQAIGLAFQVQDDILD 233 >gi|296113743|ref|YP_003627681.1| geranyltranstransferase [Moraxella catarrhalis RH4] gi|295921437|gb|ADG61788.1| geranyltranstransferase [Moraxella catarrhalis RH4] gi|326562092|gb|EGE12420.1| geranyltranstransferase [Moraxella catarrhalis 7169] gi|326565728|gb|EGE15891.1| geranyltranstransferase [Moraxella catarrhalis 12P80B1] gi|326566295|gb|EGE16447.1| geranyltranstransferase [Moraxella catarrhalis 103P14B1] gi|326568317|gb|EGE18397.1| geranyltranstransferase [Moraxella catarrhalis BC7] gi|326574560|gb|EGE24500.1| geranyltranstransferase [Moraxella catarrhalis O35E] gi|326576140|gb|EGE26055.1| geranyltranstransferase [Moraxella catarrhalis CO72] Length = 348 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 85/239 (35%), Positives = 124/239 (51%), Gaps = 23/239 (9%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNV 67 Q SK + +LD +L ++ + L A RYA+ GGK++R LV + +L Sbjct: 54 QWQSKNLPNLLDIILTHSSL------PEPLNKACRYAMSNGGKRVRPLLVLSTFLTLIKT 107 Query: 68 NHLT---------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 H T R A+E IH YSLIHDDLP MD+ +RRG+PT HI Y E A++ Sbjct: 108 GHQTDDLTKKIQMLFRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALL 167 Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE 174 AG+ L + AFE++ K D I +L L+ + M+ GQMLDI+ E + + Sbjct: 168 AGDALQSIAFEVLFECYDKNSADDAIAYKLAKLLS--CRARRMVSGQMLDIKGENQMLSQ 225 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ I + KTGAL+ A GAI A + L+ + +G+ FQ+ DD+LD D Sbjct: 226 DKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYLKHYARAIGLAFQVQDDVLDITAD 284 >gi|254516865|ref|ZP_05128923.1| polyprenyl synthetase [gamma proteobacterium NOR5-3] gi|219674370|gb|EED30738.1| polyprenyl synthetase [gamma proteobacterium NOR5-3] Length = 269 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 67/154 (43%), Positives = 99/154 (64%), Gaps = 3/154 (1%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSLIHDDLP+MD+ +RRG+PT+H+ +DE TAI+ G+GL AFE+I+S + QL Sbjct: 52 IHTYSLIHDDLPAMDDDDMRRGRPTLHVAFDEATAILVGDGLQAKAFELIASEE-QLSAQ 110 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIM 199 R L+ L G +GM+GGQ LDI+ + + Q+ I +KTGAL+ A G I+ Sbjct: 111 QRIDLVACLAKAAGFEGMVGGQGLDIEATERTLSVEQLKNIHALKTGALITAALVMGGIV 170 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A+ ++K L+ G+ +G+ FQ+ DD++D D Sbjct: 171 GQANPDQKHILKAVGDKIGLAFQIIDDVIDVRSD 204 >gi|116627949|ref|YP_820568.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus LMD-9] gi|116101226|gb|ABJ66372.1| farnesyl-diphosphate synthase [Streptococcus thermophilus LMD-9] gi|312278537|gb|ADQ63194.1| Geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus ND03] Length = 290 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 82/225 (36%), Positives = 128/225 (56%), Gaps = 10/225 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K+ID + D + + + L+SAI Y++ GGK+IR + + F + + Sbjct: 5 KKIDAAIRDFYQKKTPPVSSD----LISAILYSVDSGGKRIRPLIFLDLLEGFGLELTPS 60 Query: 73 -LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 + A++E IH SLIHDDLP+MD+ RRG+ T H ++DE TAI+AG+ L F ++ Sbjct: 61 HFDIAASLEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFALV 120 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 + +T+L IR QL+ +L+H G GM+GGQMLD++ E +D +Q+ I + KTG L+ Sbjct: 121 A--QTELSAEIRVQLIHALSHASGTFGMVGGQMLDMKGEGLELDLSQLAKIHENKTGKLL 178 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 F + I+A E L+ G +G+ FQ+ DD+LD D Sbjct: 179 TFPFVAAGIVAQQEDRVMENLQEAGRLIGLAFQVRDDILDVTADF 223 >gi|315452919|ref|YP_004073189.1| geranyltranstransferase [Helicobacter felis ATCC 49179] gi|315131971|emb|CBY82599.1| geranyltranstransferase [Helicobacter felis ATCC 49179] Length = 296 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 9/188 (4%) Query: 49 GGKKIRS--FLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+ R FL CA + + A + A+E +H YSLIHDDLP MDN RR P Sbjct: 47 GGKRFRPKLFLAVLCAFEEKIETIHACFPIALALEVLHTYSLIHDDLPCMDNADTRRYHP 106 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+H YDE TA + G+GL TYAFE++++ L D ++ L+ +L G+ GM+ GQ L Sbjct: 107 TLHKSYDETTATLVGDGLNTYAFELLAT--NSLPDRLKISLITTLAQCGGIGGMVLGQAL 164 Query: 166 D--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS--QNEKERLRCFGENLGIIF 221 D + + ++ Q+ + +KT L+ + + GA++ S + L FG LG+ F Sbjct: 165 DCHFEHQTLNLQQLETLHTLKTAKLIAASLKMGALIVCDSLETDISHSLFTFGLKLGLFF 224 Query: 222 QLADDLLD 229 Q+ DD++D Sbjct: 225 QVRDDIID 232 >gi|241889564|ref|ZP_04776862.1| geranyltranstransferase [Gemella haemolysans ATCC 10379] gi|241863186|gb|EER67570.1| geranyltranstransferase [Gemella haemolysans ATCC 10379] Length = 286 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 111/203 (54%), Gaps = 6/203 (2%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L +I Y+L+ GKKIR + + + + AIE +H YSL+HDDLP M Sbjct: 30 DILKESITYSLVNDGKKIRPLSFLYLLKFYGIEYSKYFDIALAIELVHTYSLVHDDLPEM 89 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN R GK T H Y + A++ G+ +LT AFE++S +K +++ +L+ + G Sbjct: 90 DNDDYRWGKYTNHKVYGQDVAVLTGDAMLTLAFEVLSD--ADVKPDLKVRLIKQFANYSG 147 Query: 156 LQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+ GQ+ D++ + D ++ + +KTG L+ + ++A+ + + + ++ F Sbjct: 148 AMGMIAGQIYDVKQKNYDVDADYLRKMHSLKTGRLIELPLDFACLVANKLE-DYDDVKEF 206 Query: 214 GENLGIIFQLADDLLDCEEDLPK 236 G+ LGI +Q+ DD+LD D K Sbjct: 207 GQQLGIAYQIKDDILDYYGDFEK 229 >gi|330964913|gb|EGH65173.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 295 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 128/229 (55%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ L+ L + + RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALEGLFQPPSPEL-----SRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESD 230 >gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 294 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ L+ L + + +RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESD 230 >gi|258515780|ref|YP_003192002.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 296 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 80/235 (34%), Positives = 133/235 (56%), Gaps = 10/235 (4%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++L++ + ++D L+ LL +S + H A+RY++ GGK++R ++ A Sbjct: 5 NELKKIAGQVDAALNRYLLPESSCPEIIHR-----AMRYSIFAGGKRLRPAMLIAAAEAV 59 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + + A+E IH YSLIHDDLPSMD+ RRGKPT H + E AI+AG+ LLT Sbjct: 60 GGSADKVMPAACALELIHTYSLIHDDLPSMDDDDYRRGKPTNHKVFGEAMAILAGDALLT 119 Query: 126 YAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ 181 +F++++ S + + +++ ++ G G++GGQ++DI ++ ID + I Sbjct: 120 MSFQLLAGLSGRNGIAPADVVRVIADISAAAGTTGLIGGQVVDIVSANQEIDAGTLEYIH 179 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTGAL A SGA+++ A E + L + E+ G+ FQ+ DD+LD D+ K Sbjct: 180 TKKTGALFRAAIRSGAVLSGADDEELKSLTNYAEHFGLAFQITDDILDVAGDMQK 234 >gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str. B076] gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 295 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ L+ L + + +RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESD 230 >gi|163790196|ref|ZP_02184629.1| geranyltranstransferase [Carnobacterium sp. AT7] gi|159874471|gb|EDP68542.1| geranyltranstransferase [Carnobacterium sp. AT7] Length = 299 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 119/202 (58%), Gaps = 5/202 (2%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 ++L A+ Y++ GGK+IR L+ + AA+E IH YSLIHDDLP+ Sbjct: 29 KEKLHEAMSYSIAAGGKRIRPLLLLATIQSLGGDIKKGYAASAALEFIHTYSLIHDDLPA 88 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRGKPT HI Y E AI+AG+ LLT AFEII+ + ++ L+ +L + Sbjct: 89 MDDDDLRRGKPTSHIVYGEDIAILAGDALLTQAFEIIADSDESSEKKVK--LISALAKSA 146 Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G +GM+ GQM DIQ E ++ ++ I + KTG L+ F + ++A + +E+L Sbjct: 147 GPKGMILGQMADIQGEKKSLNLEELQFIHRNKTGELLKFPIYAACVIADTTTEIEEQLMG 206 Query: 213 FGENLGIIFQLADDLLDCEEDL 234 + E++G+ +Q+ DD+LD D+ Sbjct: 207 YAEHIGLAYQIRDDILDVIGDV 228 >gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str. 2250] gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 295 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ L+ L + + +RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESD 230 >gi|299768927|ref|YP_003730953.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter sp. DR1] gi|298699015|gb|ADI89580.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter sp. DR1] Length = 303 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 14/204 (6%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L SA+ +A +LGGK++R L ASL N N A R A+E IHCYSL HDDLP Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148 MDN +RRG+PT H+ + E TA++AG+ L + AFE++ S + Q D + Q+ + Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 T M+ GQ+LD+Q E I + ++ I + KTGAL+ A GA+ + ++ Sbjct: 154 LAT---ATSKMVCGQVLDLQAEAKQIAQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210 Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229 +LR +G+ +G+ FQ+ DD+LD Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILD 234 >gi|331018236|gb|EGH98292.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 295 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 128/229 (55%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ L+ L + + RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALEGLFQAPSPEL-----SRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLSSRDAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESD 230 >gi|312132100|ref|YP_003999440.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132] gi|311908646|gb|ADQ19087.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132] Length = 319 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 15/208 (7%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 +H L I Y L LGGK+IR L A+LF + TA+ ++E H ++L+HDD+ Sbjct: 21 EHPAELYEPIHYILSLGGKRIRPLLTLLSANLFTKSWETAIEPAMSVEVFHNFTLMHDDI 80 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL-KDNIRSQLMLSLT 151 MD +RRGKPTVH ++D AI++G+ +L A+E++S + L K I L Sbjct: 81 --MDQAPLRRGKPTVHHKWDTNRAILSGDVMLVEAYELLSKLEASLLKKAI-------LR 131 Query: 152 HNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 N + GQ LD+ + E + + + + ++KT L+ ++ E G I+A AS + E Sbjct: 132 FNKVAAEVCEGQQLDMLFAEREEVSKEEYLEMIRLKTSVLVGYSMELGGIVAGASPDACE 191 Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236 L GENLG+ FQ+ DD+LD D PK Sbjct: 192 LLYEVGENLGLGFQMTDDILDVYAD-PK 218 >gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298484883|ref|ZP_07002982.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 295 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ L+ L + + +RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESD 230 >gi|239502342|ref|ZP_04661652.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii AB900] Length = 303 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 14/204 (6%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L SA+ +A +LGGK++R L ASL N N A R A+E IHCYSL HDDLP Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148 MDN +RRG+PT H+ + E TA++AG+ L + AFE++ S + Q D + Q+ + Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 T + M+ GQ+LD+Q E I + ++ I + KTGAL+ A GA+ ++ Sbjct: 154 LATAS---SKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQ 210 Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229 +LR +G+ +G+ FQ+ DD+LD Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILD 234 >gi|323466278|gb|ADX69965.1| Geranyltranstransferase [Lactobacillus helveticus H10] Length = 289 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 80/232 (34%), Positives = 124/232 (53%), Gaps = 37/232 (15%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL------ 70 ++DD L A H+ ++ +++ +S I Y+++ GGK++R L L +N L Sbjct: 14 VIDDYL---AKHLASEVDNQKISQIMAYSVMAGGKRLRPLLF-----LATLNTLGRKIDE 65 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 +R+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + Sbjct: 66 PEIRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQW 125 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----------EFIDETQVFMI 180 I+ +QL+ +T +G GM+GGQ LDI +FI++ + Sbjct: 126 IAEGSQS------AQLVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKFINQ-----M 174 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + +KTG L+ + E A+ A AS E+ +L F + G +Q+ DDL+D E Sbjct: 175 EWLKTGCLIQASVEMAAVYAKASDIEQVKLIDFAKAFGRSYQIYDDLVDVVE 226 >gi|322834065|ref|YP_004214092.1| Polyprenyl synthetase [Rahnella sp. Y9602] gi|321169266|gb|ADW74965.1| Polyprenyl synthetase [Rahnella sp. Y9602] Length = 309 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 118/206 (57%), Gaps = 17/206 (8%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+RY ALLGGK++R +LV LF+++ AA+ECIH YSLIHDDLP+MD+ Sbjct: 42 LVEAMRYGALLGGKRLRPYLVYASGQLFSLDLKNLDAPAAAVECIHAYSLIHDDLPAMDD 101 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNI 154 +RRG+PT HI++ E AI++G+ L T AF I++ P +KD R ++ L Sbjct: 102 DDLRRGQPTCHIKFGEANAILSGDALQTLAFSILADSEMPDVAVKD--RLAMISELALAS 159 Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER--- 209 G GM GGQ LD+ E + + I + KTGAL+ A GA+ A E R Sbjct: 160 GSSGMCGGQALDLAAEGQQVGLDALEQIHRHKTGALIRAAVRMGALAA----GETGRAVL 215 Query: 210 --LRCFGENLGIIFQLADDLLDCEED 233 L + + +G+ FQ+ DD+LD D Sbjct: 216 PILDNYAQAIGLAFQVQDDILDVVGD 241 >gi|212223283|ref|YP_002306519.1| bifunctional short-chain isoprenyl diphosphate synthase [Thermococcus onnurineus NA1] gi|212008240|gb|ACJ15622.1| bifunctional short-chain isoprenyl diphosphate synthase [Thermococcus onnurineus NA1] Length = 342 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 82/230 (35%), Positives = 121/230 (52%), Gaps = 16/230 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTA 72 K++ +DD+L + + + +L A R Y L GGK++R F+V A + A Sbjct: 12 KKMAKSVDDVLFKLIPEREPR---KLYDAARHYPLAGGKRVRPFVVLRAAEAVGGDPSKA 68 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L AA+E IH YSL+HDD+ MD +RRG+PTVH + AI+AG+ L + AFE ++ Sbjct: 69 LYPAAAVELIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGINMAILAGDLLFSKAFEAVA 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALM 189 + + R +L T N + GQ LDI+ E +E V +M KTGAL Sbjct: 127 RAEISPEKKARILEVLVQTSN----ELCEGQALDIEFETREEVTVDEYLQMISGKTGALF 182 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + GAI+ ++ + L +G N+GI FQ+ DD+LD EE L K Sbjct: 183 DGSATIGAIVGTDNEEYIQALSKWGRNVGIAFQIWDDVLDLIADEEKLGK 232 >gi|169632576|ref|YP_001706312.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii SDF] gi|169151368|emb|CAP00088.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii] Length = 303 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 14/204 (6%) Query: 37 DRLLSAIRYA-LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L SA+ +A +LGGK++R L ASL N N A R A+E IHCYSL HDDLP Sbjct: 34 EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148 MDN +RRG+PT H+ + E TA++AG+ L + AFE++ S + Q D + Q+ + Sbjct: 94 MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 T + M+ GQ+LD+Q E I + ++ I + KTGAL+ A GA+ ++ Sbjct: 154 LATAS---SKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQ 210 Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229 +LR +G+ +G+ FQ+ DD+LD Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILD 234 >gi|15231877|ref|NP_188071.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75274215|sp|Q9LUE1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9, chloroplastic; Short=GGPP synthase 9; Short=GGPS9; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9; AltName: Full=Dimethylallyltranstransferase 9; AltName: Full=Farnesyl diphosphate synthase 9; AltName: Full=Farnesyltranstransferase 9; AltName: Full=Geranyltranstransferase 9; Flags: Precursor gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana] gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana] Length = 360 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 79/197 (40%), Positives = 114/197 (57%), Gaps = 11/197 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + TA+ A+E IH SLIHDDLP MDN + Sbjct: 96 AVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 155 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H Y E A++AG+ LL AFE ++SS + IR+ ++ L IG Sbjct: 156 RRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPEKMIRA--VVELARAIGTT 213 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQM+D+ E ++ +V + I KT AL+ A G IM ++ E E+LR Sbjct: 214 GLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRK 273 Query: 213 FGENLGIIFQLADDLLD 229 + +G++FQ+ DD+LD Sbjct: 274 YARCIGLLFQVVDDILD 290 >gi|222153401|ref|YP_002562578.1| geranyltranstransferase [Streptococcus uberis 0140J] gi|222114214|emb|CAR42776.1| putative geranyltranstransferase [Streptococcus uberis 0140J] Length = 289 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 116/212 (54%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93 +++L A+ Y++ GGK+IR L E + + + AA+E IH SLIHDDLP Sbjct: 22 SEKLNEAVLYSINAGGKRIRPILFLEVIEALQIPLTESHFKAAAALEMIHTGSLIHDDLP 81 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H ++DE TAI+AG+ L AF +++ +T ++ L+ SL+ Sbjct: 82 AMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAFGMLA--ETDFPTDVTVDLVRSLSSA 139 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD+ E ++ + +I + KTG L+ + + A +A +N Sbjct: 140 SGTFGMVGGQMLDMAAEGKKLNLKNLQLIHRHKTGQLLAYPFWAAARVAQLDENLLATFL 199 Query: 212 CFGENLGIIFQLADDLLDCEEDL------PKK 237 G +G+ FQ+ DD+LD + PKK Sbjct: 200 EIGMIIGLAFQVRDDILDITANFEEIGKTPKK 231 >gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 295 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ L+ L + + +RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGASCAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESD 230 >gi|228476852|ref|ZP_04061497.1| geranyltranstransferase [Streptococcus salivarius SK126] gi|228251426|gb|EEK10571.1| geranyltranstransferase [Streptococcus salivarius SK126] Length = 290 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 120/200 (60%), Gaps = 6/200 (3%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L++AI Y++ GGK+IR + + F + + V A++E IH SLIHDDLP+MD Sbjct: 26 LITAILYSVDSGGKRIRPLIFLDLLEGFGLELTPSHFDVAASLEMIHTGSLIHDDLPAMD 85 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + RRG+ T H ++DE TAI+AG+ L F++++ +T L IR QL+ L+H+ G Sbjct: 86 DDDYRRGRLTNHKKFDEATAILAGDSLFLDPFDLLA--QTDLSAEIRVQLIQVLSHSSGT 143 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQMLD++ E +D +Q+ I + KTG L+ F + I+A Q E L+ G Sbjct: 144 FGMVGGQMLDMKGEGQELDLSQLAKIHEHKTGKLLTFPFVAAGIVAQKDQQVLENLQEAG 203 Query: 215 ENLGIIFQLADDLLDCEEDL 234 +G+ FQ+ DD+LD D Sbjct: 204 HLIGLAFQVRDDILDVTADF 223 >gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis thaliana] Length = 360 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 79/197 (40%), Positives = 114/197 (57%), Gaps = 11/197 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + TA+ A+E IH SLIHDDLP MDN + Sbjct: 96 AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 155 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H Y E A++AG+ LL AFE ++SS + IR+ ++ L IG Sbjct: 156 RRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRA--VVELARTIGTT 213 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQM+D+ E ++ +V + I KT AL+ A G IM ++ E E+LR Sbjct: 214 GLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRK 273 Query: 213 FGENLGIIFQLADDLLD 229 + +G++FQ+ DD+LD Sbjct: 274 YARCIGLLFQVVDDILD 290 >gi|330877558|gb|EGH11707.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 295 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 128/229 (55%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ L+ L + + RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALEGLFQAPSPEL-----GRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVWLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESD 230 >gi|240103885|ref|YP_002960194.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA) [Thermococcus gammatolerans EJ3] gi|239911439|gb|ACS34330.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA) [Thermococcus gammatolerans EJ3] Length = 343 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 9/192 (4%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 +A Y L GGK++R F+V + AL AA+E IH YSL+HDD+ MD + Sbjct: 37 AARHYPLAGGKRVRPFVVLRATEAVGGDPEKALYPAAAVEFIHNYSLVHDDIMDMDE--L 94 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG+PTVH + AI+AG+ L + AFE ++ K R +L T N + Sbjct: 95 RRGRPTVHKVWGINMAILAGDLLFSKAFEAVAKAKVDPDKKARILEVLVKTSN----ELC 150 Query: 161 GGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ LDI+ E DE V KM KTGAL + GAI+ ++ + L +G N+ Sbjct: 151 EGQALDIEFETRDEVTVDEYLKMISGKTGALFDGSATIGAIVGTDNEEYIQALSKWGRNV 210 Query: 218 GIIFQLADDLLD 229 GI FQ+ DD+LD Sbjct: 211 GIAFQIWDDVLD 222 >gi|149278033|ref|ZP_01884172.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter sp. BAL39] gi|149231231|gb|EDM36611.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter sp. BAL39] Length = 322 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 84/237 (35%), Positives = 128/237 (54%), Gaps = 25/237 (10%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64 P++LQE ID + +++ +RL I Y + LGGK+IR LV A L Sbjct: 4 PTQLQE---FIDQAIQNIIYPA-------QPERLYLPISYIMSLGGKRIRPALVLMSADL 53 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F + + AIE H ++LIHDD+ MDN +RRGK TVH ++ AI++G+ ++ Sbjct: 54 FAADVHQVMPAALAIETFHNFTLIHDDI--MDNAPLRRGKATVHEKWGVNNAILSGDVMM 111 Query: 125 TYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMI 180 A + ++ LKD + T N QG+ GQ LD++ E D+ + + Sbjct: 112 VEANKHLAMLDAAVLKDALE-------TFNSTAQGVCEGQQLDMEFESRDQVSIPEYINM 164 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 ++KT L+ A + GA +A A++++ E+L FGENLGI FQL DD+LD D P+K Sbjct: 165 IRLKTAVLLGGAMKLGAQVARATKSQAEQLYAFGENLGIAFQLQDDILDVYGD-PEK 220 >gi|332184586|gb|AEE26840.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida 3523] Length = 293 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 110/202 (54%), Gaps = 19/202 (9%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A+ Y+ GGK+IR+ V ++ +V AIE IH YSLIHDDLP+MDN Sbjct: 28 LIKAMHYSFFSGGKRIRAQFVYAIGEALAIDKADCDKVAFAIESIHTYSLIHDDLPAMDN 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHN 153 +RRGKPT HI+++E TAI+AG+ L + AFEI+ S +LK ++ Sbjct: 88 DTLRRGKPTCHIKFNEATAILAGDALQSLAFEILQDINCSDIARLK-----KINKFFAQC 142 Query: 154 IGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--K 207 G GM+GGQ LDI+ E ++E Q+ K A M AC + +QN+ + Sbjct: 143 CGADGMVGGQQLDIEGENKKLNLEELQILHTNKT---AKMFRACIVLPYILSQNQNDEIE 199 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 L + +G+ FQ+ DD+LD Sbjct: 200 NLLVKLADLIGLCFQIKDDILD 221 >gi|17546941|ref|NP_520343.1| geranyltranstransferase [Ralstonia solanacearum GMI1000] gi|17429241|emb|CAD15929.1| probable geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum GMI1000] Length = 299 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 114/204 (55%), Gaps = 14/204 (6%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+RYA LG GK++R L +L + V A+E IH YSL+HDD+P MD Sbjct: 32 RLHAAMRYATLGAGKRVRPLLAHAAGALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151 + +RRG+PTVH YDE TA++ G+ L T AF ++ SP T R+ L+ L Sbjct: 92 DDDLRRGRPTVHRAYDEATALLVGDALQTQAFIALAELGAVSPAT------RAGLVGELA 145 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G GM GGQ +D+Q + +Q + + +MKTGAL+ + GA+ A + E+ Sbjct: 146 RASGSLGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNAAALEQ 205 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD D Sbjct: 206 VDAYAGAVGLAFQVVDDILDVTAD 229 >gi|255531531|ref|YP_003091903.1| polyprenyl synthetase [Pedobacter heparinus DSM 2366] gi|255344515|gb|ACU03841.1| Polyprenyl synthetase [Pedobacter heparinus DSM 2366] Length = 322 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 15/206 (7%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 ++L + IRY + +GGK+IR L A LF + L A+ AIE H ++L+HDD+ M Sbjct: 25 EKLYAPIRYIMSMGGKRIRPVLTLMAADLFEADILKAIPAALAIETFHNFTLVHDDI--M 82 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNI 154 DN +RRGK TVH ++ AI++G+ ++ A + +S + LKD + T N Sbjct: 83 DNAPLRRGKQTVHEKWGINNAILSGDVMMVEANKQLSMLHSAILKDALE-------TFNA 135 Query: 155 GLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 +G+ GQ LD+ Q + + + ++KT L+ A + GA +A A NE E+L Sbjct: 136 TARGVCEGQQLDMEFEQQAIVSIPEYINMIRLKTAVLLGGAMKLGAQVAGADHNEAEQLY 195 Query: 212 CFGENLGIIFQLADDLLDCEEDLPKK 237 FG NLGI FQL DD+LD D P+K Sbjct: 196 QFGLNLGIAFQLQDDILDVYGD-PEK 220 >gi|254468449|ref|ZP_05081855.1| geranyltranstransferase [beta proteobacterium KB13] gi|207087259|gb|EDZ64542.1| geranyltranstransferase [beta proteobacterium KB13] Length = 290 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 121/204 (59%), Gaps = 3/204 (1%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 ND AI+YA+ GGK+IR++L+ F ++ +GA+IE IH YSL+HDDLP Sbjct: 26 NDINHKAIKYAISNGGKRIRAYLLFTLGKHFGISKNVLNILGASIEMIHAYSLVHDDLPC 85 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRGK T H ++DE A++ G+ L + AFE++SS K ++ ++ + + L +I Sbjct: 86 MDDDDLRRGKLTCHKKFDEAQALLVGDALQSLAFELLSSNKLKIDPELKLECINLLASSI 145 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G +GM+ GQ LD+ E T+ + I + KTG L+ +I++ + + L+ Sbjct: 146 GSKGMVLGQSLDMIYEKKKPTKKIIEKIHRNKTGMLISTCILIPSIISRQRNSTHKNLKI 205 Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236 ENLG+++Q+ DD LD D+ K Sbjct: 206 LSENLGLLYQMVDDYLDATSDVEK 229 >gi|295695407|ref|YP_003588645.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912] gi|295411009|gb|ADG05501.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912] Length = 295 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/230 (35%), Positives = 123/230 (53%), Gaps = 13/230 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + ++ +D LD L+ + RL A+RY+L GGK++R L Sbjct: 9 WEAGARAVDDALDALI------PPGKGAGRLHEAMRYSLFAGGKRLRPLLAMAACEGAGG 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AL A+E +H YSLIHDDLP+MD+ RRG+PT H + E A++AG+ LLT A Sbjct: 63 SLREALPAACALELVHTYSLIHDDLPAMDDDDYRRGRPTNHRVFGEAMAVLAGDALLTLA 122 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKM 183 F +++ K L R +L+ L G GM+GGQ LDI+ D D + + + Sbjct: 123 FGVLA--KAPLPATTRIRLVDELAEASGKDGMVGGQALDIEATGADGQPDPELLRDLHRK 180 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ + G + A A ++ +RL +G+ +G+ +Q+ DDLLD D Sbjct: 181 KTGALIIASLRMGGLCAGADESLLDRLSAYGQAVGLAYQIVDDLLDVGGD 230 >gi|90415578|ref|ZP_01223512.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207] gi|90332901|gb|EAS48071.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207] Length = 295 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/223 (36%), Positives = 128/223 (57%), Gaps = 10/223 (4%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71 S ++D L+ +L T + L +A+RY++ GGK++R L A + Sbjct: 12 SAQVDAQLEAML-----PAATGPAEPLFAAMRYSVFNGGKRLRPALCFAAADAVAGSDAN 66 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 +V AA+E IH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+AG+GL + AF+ + Sbjct: 67 TAKVAAALEMIHAYSLIHDDLPAMDDDDLRRGKPTCHIQFDEATAILAGDGLQSLAFQQL 126 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALM 189 ++L I +L+ +L+ G GM+ GQ +D+ ++ + ++ KTGAL+ Sbjct: 127 CE-LSELDPTIVVELVSTLSRLGGCSGMVAGQAIDLAATGSVLELDALKVMHAHKTGALI 185 Query: 190 CFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + GA+ ASQ + L+ F +G+ FQ+ DD+LD E Sbjct: 186 EASVLMGALATGQASQEQLGALKDFARAIGLAFQIQDDILDVE 228 >gi|313114145|ref|ZP_07799697.1| putative geranyltranstransferase [Faecalibacterium cf. prausnitzii KLE1255] gi|310623554|gb|EFQ06957.1| putative geranyltranstransferase [Faecalibacterium cf. prausnitzii KLE1255] Length = 293 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 80/208 (38%), Positives = 121/208 (58%), Gaps = 5/208 (2%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L+TA + A RY+L+GG K+IR+ LV + + A + AA+E +H Sbjct: 18 LETACGRFLPEESEVCRAARYSLMGGGKRIRAVLVLSVCDMLGGSMQAAQQFAAAVEMLH 77 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 CYSLIHDDLP MDN +RRG+P+ H + E TA++AG+ LLT AFE +++ ++ Sbjct: 78 CYSLIHDDLPCMDNDDLRRGRPSCHKAFSEATAMLAGDVLLTEAFETVANAPADA--SVC 135 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAH 201 Q +L G +GM+ GQ LD++ E + E Q+ +I + KTGAL+ A + GA A Sbjct: 136 VQAARALGAGAGSRGMVYGQELDLKYEALAATEDQLRLIHRNKTGALINAAIQMGAAAAK 195 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229 A + + L + LG++FQ+ DD+LD Sbjct: 196 ADEAQCRVLEQYAYGLGLVFQIVDDVLD 223 >gi|153208848|ref|ZP_01947072.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212218667|ref|YP_002305454.1| dimethylallyltransferase [Coxiella burnetii CbuK_Q154] gi|120575699|gb|EAX32323.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012929|gb|ACJ20309.1| dimethylallyltransferase [Coxiella burnetii CbuK_Q154] Length = 267 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 11/200 (5%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q RL A+ YA+ GGK+IR F V+ AIE +HCYSL+HDDL Sbjct: 24 QTPQRLHEAMTYAVRSGGKRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDL 83 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MD+ RRGKP+ H +DE TAI+ G+ L AFE+++ +DN ++L+ L + Sbjct: 84 PAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLA------RDN-NTRLINVLAN 136 Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209 G GM GGQ LD++ + + T Q+ ++ ++KTGAL A E GA+ A ++ ++ Sbjct: 137 ACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQK 196 Query: 210 LRCFGENLGIIFQLADDLLD 229 LR G +G+IFQ DDL D Sbjct: 197 LRKLGATVGLIFQWQDDLAD 216 >gi|313905343|ref|ZP_07838709.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6] gi|313469813|gb|EFR65149.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6] Length = 298 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 110/203 (54%), Gaps = 13/203 (6%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+ Y++L GGK+IR L+ E + + AAIE IH +SL+HDDLP++D Sbjct: 31 KLTEAMNYSMLAGGKRIRPVLMLESYRMCGGDAAVVEPFMAAIEMIHTHSLVHDDLPAID 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIG 155 + RRGK T H + ++AG+ LL YA+E + +D + ++ + L G Sbjct: 91 DDEFRRGKKTTHAAFGAALGVLAGDALLNYAYETAMTAFDCCQDPAKVARALRVLAQKTG 150 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKM--------KTGALMCFACESGAIMAHASQNEK 207 + GMLGGQ +D+++E + VF +++ KT AL+ GAI+A A + Sbjct: 151 IGGMLGGQSVDVENE---KNGVFQLERKTIDYIYVNKTAALLEAPLMIGAILAGADEKTV 207 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 ++ G G+ FQ+ADD+LD Sbjct: 208 SAMQEIGHRAGLAFQIADDVLDV 230 >gi|299066176|emb|CBJ37360.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum CMR15] Length = 299 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 114/204 (55%), Gaps = 14/204 (6%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+RYA LG GK++R L +L + V A+E IH YSL+HDD+P MD Sbjct: 32 RLHAAMRYATLGAGKRVRPLLAHAAGALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151 + +RRG+PTVH YDE TA++ G+ L T AF ++ SP T R+ L+ L Sbjct: 92 DDDLRRGRPTVHRAYDEATALLVGDALQTQAFIALAELGAVSPAT------RAGLVGELA 145 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G GM GGQ +D+Q + +Q + + +MKTGAL+ + GA+ A + E+ Sbjct: 146 RASGSLGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNAAALEQ 205 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD D Sbjct: 206 VDAYAGAVGLAFQVVDDILDVTAD 229 >gi|72536066|gb|AAZ73133.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium DC404] Length = 301 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 113/199 (56%), Gaps = 6/199 (3%) Query: 36 NDRLLSAIRYALLG-GKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDL 92 DR+ SA+R +L GK+IR L+ A + +H L + A+E +H SLI DD+ Sbjct: 36 RDRVSSAMREGVLAPGKRIRPLLLILAARDLGCDRDHPGLLDMACAVEMVHASSLILDDI 95 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRG+PT+H QY E AI+A LL+ AF ++ + + L RSQ + L+ Sbjct: 96 PCMDNAALRRGRPTIHRQYGEDVAILAAVALLSSAFGVMVAAQG-LSPECRSQAVAELSM 154 Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +G QG++ GQ D+++ + ++ ++KT L + A+ A AS ++++ Sbjct: 155 AVGTQGLVQGQYKDLREGTAPRSAEEIATTNELKTSVLFGATLQIAALAAGASPAARQKM 214 Query: 211 RCFGENLGIIFQLADDLLD 229 RCF ++LG FQL DDL D Sbjct: 215 RCFAQDLGQAFQLLDDLAD 233 >gi|257439493|ref|ZP_05615248.1| geranyltranstransferase [Faecalibacterium prausnitzii A2-165] gi|257198065|gb|EEU96349.1| geranyltranstransferase [Faecalibacterium prausnitzii A2-165] Length = 227 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 124/209 (59%), Gaps = 7/209 (3%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L+ A + A RY+LLGG K+IR+ LV + N + A + AA+E +H Sbjct: 18 LEKACETFLPEESEVCRAARYSLLGGGKRIRAVLVLAVCDMLNGSAEAAEQFAAAVEMLH 77 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNI 142 CYSLIHDDLP MDN +RRGKP+ H + E TA++AG+ LLT AF +++ +P + + + Sbjct: 78 CYSLIHDDLPCMDNDDLRRGKPSCHKAFGESTAMLAGDVLLTEAFNVVANAPASPI---V 134 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMA 200 Q +L G GM+ GQ LD++ E + E Q+ +I + KTGAL+ A + GA A Sbjct: 135 SVQAAKALGAGAGSHGMVYGQELDLKYEALAATEEQLRLIHRNKTGALINAAVQMGAAAA 194 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ + + L + +G++FQ+ DD+LD Sbjct: 195 QANETQCKELEDYAFGIGLVFQIVDDVLD 223 >gi|313200383|ref|YP_004039041.1| polyprenyl synthetase [Methylovorus sp. MP688] gi|312439699|gb|ADQ83805.1| Polyprenyl synthetase [Methylovorus sp. MP688] Length = 295 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 85/226 (37%), Positives = 131/226 (57%), Gaps = 15/226 (6%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL- 73 R++ +LDD+L A+++ RL A+RYA+LGG K L+ A F ++A+ Sbjct: 13 RMERVLDDIL--PAANIIPS---RLHGAMRYAVLGGGKRVRALLAHAAGEFCQAPISAVE 67 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + AA+E IH YSL+HDD+P MD+ +RRGKP+ H QYD+ TA++ G+ L AF++++ Sbjct: 68 QSAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQALAFKVLAE 127 Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMC 190 P L+D R M+ L G +GM GGQ +D+ +D TQ + Q KTGAL+ Sbjct: 128 PGL-LRDAARQMHMVHILAVASGSRGMAGGQAIDLASVGLDLTQTELEQMHIHKTGALIR 186 Query: 191 FACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEED 233 A GA A + +R++ + + +G+ FQ+ DD+LD E D Sbjct: 187 AAALLGA--ESADTVDADRIKAVDHYAQAIGLAFQVVDDILDSEAD 230 >gi|297537809|ref|YP_003673578.1| polyprenyl synthetase [Methylotenera sp. 301] gi|297257156|gb|ADI29001.1| Polyprenyl synthetase [Methylotenera sp. 301] Length = 304 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 125/222 (56%), Gaps = 10/222 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73 RI+ +L++ L T Q RL SA+RY AL GGK++R+ L + L + A Sbjct: 25 RIEDVLNNALPSTNVAPQ-----RLHSAMRYSALEGGKRVRALLCYAASELCKTDAKVAD 79 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDD+P MD+ +RRGKP+ H QYD+ TA++ G+ L + AFE++S Sbjct: 80 AAACAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQSLAFEVLSQ 139 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCF 191 + N + ++ L G GM GGQ +D+ + + +T + + ++KTGAL+ Sbjct: 140 ANLCTQTNHQVSMLNILAKASGSTGMAGGQAIDLASVGKMLSQTDLEQMHQLKTGALIQA 199 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A G I + + + + +N+G+ FQ+ DD+LD E D Sbjct: 200 AVLLGGI--NGEIEKTAAISTYAKNIGLAFQVIDDILDVEAD 239 >gi|237797521|ref|ZP_04585982.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020371|gb|EGI00428.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 295 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 114/201 (56%), Gaps = 5/201 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RY+++ GGK++R L A A+E IH YSL+HDDLP+MD Sbjct: 30 RLYDAMRYSVMNGGKRVRPLLAYAACEALGGEARDADGAACAVELIHAYSLVHDDLPAMD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIG 155 + +RRG+PT H +DE AI+AG+GL + AF + +P +D R Q++ +L G Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQMVSTLAAAAG 149 Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRC 212 GM+GGQ +D+ +D+ + + + KTGAL+ + GA+ + A Q + L+ Sbjct: 150 PAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGQADQPRLDSLQV 209 Query: 213 FGENLGIIFQLADDLLDCEED 233 + +G+ FQ+ DD+LD E D Sbjct: 210 YARAVGLAFQVQDDILDVESD 230 >gi|75274213|sp|Q9LUD9|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3, chloroplastic; Short=GGPP synthase 3; Short=GGPS3; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3; AltName: Full=Dimethylallyltranstransferase 3; AltName: Full=Farnesyl diphosphate synthase 3; AltName: Full=Farnesyltranstransferase 3; AltName: Full=Geranyltranstransferase 3; Flags: Precursor gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 360 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/197 (40%), Positives = 114/197 (57%), Gaps = 11/197 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + TA+ A+E IH SLIHDDLP MDN + Sbjct: 96 AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 155 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H Y E A++AG+ LL AFE ++SS + IR+ ++ L IG Sbjct: 156 RRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRA--VVELARAIGTT 213 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQM+D+ E ++ +V + I KT AL+ A G IM ++ E E+LR Sbjct: 214 GLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRK 273 Query: 213 FGENLGIIFQLADDLLD 229 + +G++FQ+ DD+LD Sbjct: 274 YARCIGLLFQVVDDILD 290 >gi|317053956|ref|YP_004117981.1| Polyprenyl synthetase [Pantoea sp. At-9b] gi|316951951|gb|ADU71425.1| Polyprenyl synthetase [Pantoea sp. At-9b] Length = 301 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 8/202 (3%) Query: 34 QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHD 90 Q D++ +A+R L GK+IR L+ A + L + A+E +H SLI D Sbjct: 34 QQADQVRAAMRAGTLAPGKRIRPLLLLLAAHDMGCDSQQPGLLDLACAVEMVHAASLILD 93 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149 D+PSMDN +RRG+PTVH ++ AI+A LL+ AFE+I+ +P L +S + Sbjct: 94 DIPSMDNAQMRRGRPTVHREFGANVAILAAIALLSRAFEVIALAPG--LAAQRKSDAIAE 151 Query: 150 LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L+ +GLQG++ GQ D+ D + + ++KT L + AI A+AS + Sbjct: 152 LSAAVGLQGLVQGQFQDLHDGAHARSAEAIELTNELKTSVLFRATLQMAAIAANASPTVR 211 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 + L F ++LG+ FQL DDL D Sbjct: 212 QNLSAFAQDLGLAFQLLDDLTD 233 >gi|154174645|ref|YP_001409121.1| geranyltranstransferase [Campylobacter curvus 525.92] gi|153793122|gb|EAU00317.2| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Campylobacter curvus 525.92] Length = 300 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 24/206 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK R+ L+ LT A+RV +E +H YSLIHDDLP+MD+ +RRG PT Sbjct: 36 GGKHFRAQLLLGVVDALR-PQLTQNAMRVALGLEMMHTYSLIHDDLPAMDDAPLRRGVPT 94 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H +YDEVTAI+AG+ L T AF IS + L+ + + + L+ N G GM+ GQ LD Sbjct: 95 LHTRYDEVTAILAGDALNTQAFYEIS--RADLEAPVVVKCVEILSANAGASGMVLGQALD 152 Query: 167 IQDEFIDETQVF-------MIQKM------------KTGALMCFACESGAIMAHASQNEK 207 E D+ V + QK KT L+ + E GA++A + Sbjct: 153 CFFENSDKADVKNAKNRLGLAQKRLNLDELEFLHIHKTAKLIAASLEMGAVIAALDAAQC 212 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 ER+ G +LG+ FQ+ DDL+D D Sbjct: 213 ERIYGIGLDLGLAFQIEDDLIDATSD 238 >gi|72536073|gb|AAZ73139.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium DC416] Length = 301 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 112/202 (55%), Gaps = 8/202 (3%) Query: 34 QHNDRLLSAIRYALLG-GKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHD 90 Q DR+ +A+R L GK+IR L+ A +V L + A+E +H SLI D Sbjct: 34 QQADRVRAAMRAGTLAPGKRIRPLLLLLAARDMGCDVAQQGILDLACAVEMVHAASLILD 93 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149 D+PSMDN +RRG+P +H +Y E AI+A LL+ AFE+I+ +P L +++ + Sbjct: 94 DIPSMDNARMRRGRPAIHCEYGENVAILAAVALLSRAFEVIALAPG--LPATHKAEAIAE 151 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L+ +GLQG++ GQ D+ D + + + ++KT L + AI A AS + Sbjct: 152 LSSAVGLQGLVQGQFQDLHDGAHSRSPEAITLTNELKTSVLFRATLQMAAIAADASVQVR 211 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 +RL F ++LG FQL DDL D Sbjct: 212 QRLSYFAQDLGQAFQLLDDLAD 233 >gi|291166548|gb|EFE28594.1| geranyltranstransferase [Filifactor alocis ATCC 35896] Length = 296 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/193 (37%), Positives = 120/193 (62%), Gaps = 3/193 (1%) Query: 40 LSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 + ++ Y+LL GGK+IR L + A L+++++ L +A+E IH YSLIHDDLP+MD+ Sbjct: 37 MESMNYSLLAGGKRIRPILCLQSADLYHISNEAILPYASALEMIHTYSLIHDDLPAMDDD 96 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRGKPT H Y E AI+AG+GLL A+EI+ + + + + + + G+ G Sbjct: 97 DLRRGKPTNHKVYGEAIAILAGDGLLNLAYEIMLNDLLHGYTDGKLKAVHYIAKAAGIHG 156 Query: 159 MLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 M+ GQ+LD+Q ++ D + I + KTG L+ + +GA++ AS+ + + ++ Sbjct: 157 MVAGQVLDLQMENQRCDADLLKKIHRNKTGELLKASILAGALVGGASEEDCYYWEQYADH 216 Query: 217 LGIIFQLADDLLD 229 LG++FQ+ DD+LD Sbjct: 217 LGLVFQITDDMLD 229 >gi|121534498|ref|ZP_01666321.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1] gi|121306991|gb|EAX47910.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1] Length = 221 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 105/188 (55%), Gaps = 9/188 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + Q+ + +D L L+ + A +++T + A+RY+L GGK++R L+ A Sbjct: 4 LKAYCQQKAALVDEALARLVPRQAGYLETVYE-----AMRYSLFAGGKRLRPILLMAAAD 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L V +E IH YSLIHDDLP+MDN RRGKPT H + E AI+AG+GL Sbjct: 59 AVGGRGSQYLHVACGLEMIHTYSLIHDDLPAMDNDDFRRGKPTSHRVFGEGMAILAGDGL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 LT AFE++ S + ++ + +++ + G GM+GGQ +D+ E +D + + Sbjct: 119 LTAAFEVMLS-QPGVEPGVLLKVVREIAQAAGPAGMVGGQAVDLAAEGKVLDADALKFMH 177 Query: 182 KMKTGALM 189 + KTGAL Sbjct: 178 QAKTGALF 185 >gi|326564543|gb|EGE14769.1| geranyltranstransferase [Moraxella catarrhalis 46P47B1] gi|326567053|gb|EGE17175.1| geranyltranstransferase [Moraxella catarrhalis BC1] Length = 351 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 125/242 (51%), Gaps = 26/242 (10%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF--- 65 Q SK + +LD +L ++ + L A RYA+ GGK++R LV + Sbjct: 54 QWQSKNLPNLLDIILTHSSL------PEPLNKACRYAMSNGGKRVRPLLVLSTFLMLIQT 107 Query: 66 -----NVNHLTA-----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115 + N+LT R A+E IH YSLIHDDLP MD+ +RRG+PT HI Y E Sbjct: 108 GDHKNHKNNLTKKIQMLFRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDV 167 Query: 116 AIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--F 171 A++AG+ L + AFE++ K D I +L L+ + M+ GQMLDI+ E Sbjct: 168 ALLAGDALQSIAFEVLFECYDKNSADDAIAYKLAKLLS--CRARRMVSGQMLDIKGENQM 225 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + + ++ I + KTGAL+ A GAI A + L+ + +G+ FQ+ DD+LD Sbjct: 226 LSQDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYLKHYARAIGLAFQVQDDVLDIT 285 Query: 232 ED 233 D Sbjct: 286 AD 287 >gi|332977569|gb|EGK14339.1| geranyltranstransferase [Desmospora sp. 8437] Length = 298 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/227 (35%), Positives = 124/227 (54%), Gaps = 10/227 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+E +K ++ L + + + A +T L A+ Y+LL GGK++R L A Sbjct: 8 LKEKAKSVEARLKEYMERPAGIPET-----LREAMAYSLLAGGKRLRPVLTLATAEALGG 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AL A+E IH YSLIHDDLP+MD+ RRG PT H Y E AI+AG+ LLT A Sbjct: 63 DEEKALPFACAVEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKIYGEAMAILAGDALLTRA 122 Query: 128 FEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183 F++++ +L L+ G +GM+GGQ+ DIQ E + ++ I + Sbjct: 123 FDVMAEGALDAELPRKTALTLIRECAVRAGAEGMVGGQVKDIQGEGREVSLEELQDIHRS 182 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + GA++ + ++E + L + E LG+ FQ+ DD+LD Sbjct: 183 KTGDLITGSVRIGAMVGGSGEDELQALTGYAERLGLAFQIQDDVLDV 229 >gi|14624998|dbj|BAB61879.1| farnesyl diphosphate synthase [Rhodobacter blasticus] Length = 138 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/142 (42%), Positives = 88/142 (61%), Gaps = 8/142 (5%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+P MDN +RRG PTVH+++DE TA++AG+ L T AFE++ P + +R L+ Sbjct: 1 HDDMPCMDNDDLRRGLPTVHVKWDEATAVLAGDALQTLAFELLCDPVAGPAE-VRIGLVQ 59 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQ 204 +L G +GM+ GQ LDI E ++ +Q KTGAL+ F+ E+GAI+A Q Sbjct: 60 ALAQASGAEGMVLGQALDIAAETAGRPLTLDEITALQAGKTGALIRFSAEAGAILA---Q 116 Query: 205 NEKERLRCFGENLGIIFQLADD 226 ++ LR + LG+ FQ+ADD Sbjct: 117 ADRAPLRTYATALGLAFQIADD 138 >gi|291459864|ref|ZP_06599254.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417654|gb|EFE91373.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str. F0262] Length = 317 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 111/208 (53%), Gaps = 22/208 (10%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNH---------LTALRVGAAIECIHCYSLIHDD 91 A+ Y+LL GGK++R L+ E LF+ L A G +E IH +SL HDD Sbjct: 37 AMNYSLLSGGKRLRPILILESYELFSPKEERDRLLRPLLYAFMAG--MEMIHSFSLCHDD 94 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIR------ 143 LP MD RRG+ + +Y E +AG+GL YAF+++S + LK Sbjct: 95 LPCMDGDRYRRGRKSTWYRYGEAMGTLAGDGLSLYAFQLVSKTAAEGFLKPGFSRYASDV 154 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 ++ + L+ + G+ GMLGGQ D++ + + E ++ +I + KT AL+ A GA++A Sbjct: 155 NEAVRLLSSSAGIHGMLGGQAADVRKTGQEMGEEELLLIYERKTAALISGALSIGALLAG 214 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229 AS LR + LG+ FQ+ DD+LD Sbjct: 215 ASAESIALLREISKALGLAFQIRDDILD 242 >gi|315639120|ref|ZP_07894287.1| geranyltranstransferase [Campylobacter upsaliensis JV21] gi|315480824|gb|EFU71461.1| geranyltranstransferase [Campylobacter upsaliensis JV21] Length = 277 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK R+ L+ + AL A+E IH YSLIHDDLP+MDN RR PT+ Sbjct: 34 GGKYFRAQLLLNVVYFYKKERFKEALDAALALEFIHTYSLIHDDLPAMDNADFRRSTPTL 93 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDE TAI+ G+ L T AF ++S + L I +L+ +L N GL GM+ GQ +D Sbjct: 94 HKSYDETTAILVGDALNTEAFLLLS--RLNLSATISLKLVETLAFNAGLNGMIIGQAIDC 151 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D+ ++ ++ + KT L+ + + G + + ++L G LG+IFQ+ D Sbjct: 152 YFEDQKLNLKELEFLHTHKTAKLIAASLKMGCQICELDETITKQLYELGLKLGLIFQIND 211 Query: 226 DLLDC 230 D++D Sbjct: 212 DIIDA 216 >gi|295693200|ref|YP_003601810.1| geranyltranstransferase [Lactobacillus crispatus ST1] gi|295031306|emb|CBL50785.1| Geranyltranstransferase [Lactobacillus crispatus ST1] Length = 289 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 29/228 (12%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRS--FLVTECASLFNVNHLTALR 74 ++DD L A H+ ++ D+ +S I Y+++ GGK++R FL T A + +R Sbjct: 14 VIDDYL---AKHLASEVEDQKISQIMAYSVMAGGKRLRPLLFLATLNALGRKIEE-PEIR 69 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 70 IACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEG 129 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----------EFIDETQVFMIQKMK 184 K L+ +T +G GM+GGQ LDI +FI++ ++ +K Sbjct: 130 SKSAK------LVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINK-----MEWLK 178 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 TG L+ + E A+ A AS E+ +L F + G +Q+ DDL+D E Sbjct: 179 TGCLIQASVEMAAVYAGASDIEQVKLVDFAKIFGRSYQIYDDLVDVVE 226 >gi|256843404|ref|ZP_05548892.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus 125-2-CHN] gi|293380304|ref|ZP_06626378.1| polyprenyl synthetase [Lactobacillus crispatus 214-1] gi|256614824|gb|EEU20025.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus 125-2-CHN] gi|290923119|gb|EFE00048.1| polyprenyl synthetase [Lactobacillus crispatus 214-1] Length = 289 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 29/228 (12%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAI-RYALLGG-KKIRS--FLVTECASLFNVNHLTALR 74 ++DD L A H+ ++ D+ +S I Y+++GG K++R FL T A + +R Sbjct: 14 VIDDYL---AKHLASEVEDQKISQIMAYSVMGGGKRLRPLLFLATLNALGRKIEE-PEIR 69 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 70 IACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEG 129 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----------EFIDETQVFMIQKMK 184 K L+ +T +G GM+GGQ LDI +FI++ ++ +K Sbjct: 130 SKSAK------LVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINK-----MEWLK 178 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 TG L+ + E A+ A AS E+ +L F + G +Q+ DDL+D E Sbjct: 179 TGCLIQASVEMAAVYAGASDIEQVKLVDFAKIFGRSYQIYDDLVDVVE 226 >gi|71066490|ref|YP_265217.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4] gi|71039475|gb|AAZ19783.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4] Length = 335 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 115/219 (52%), Gaps = 29/219 (13%) Query: 39 LLSAIRYALLG-GKKIRSFLVTEC-ASLFNVNHLTA-------------------LRVGA 77 LL A RY + G GK +R LV AS ++ N A R Sbjct: 48 LLDACRYVMTGTGKLVRPLLVASAFASTYSHNDTIADKDNALATLLENDSDYDMSRRAAL 107 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PK 135 A+E +H YSL+HDDLP MD+ +RRG+PT HI + E TA++AG+ L T AFE++++ P Sbjct: 108 AVELLHTYSLVHDDLPCMDDDELRRGQPTAHIVFAEATALLAGDVLQTLAFEVLTAEMPT 167 Query: 136 -TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191 +I SQL + M+ GQMLD+ E I ++ + I + KTGAL+ Sbjct: 168 FAPFDSDIASQLFAIFAPRA--RRMVSGQMLDLNAEATTGISQSDLEAIHRDKTGALIEA 225 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A G I A A+ ++ L+ +++G+ FQ+ DD+LD Sbjct: 226 AMLMGGICAGATATQRMALQECAQHIGLAFQVQDDILDV 264 >gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 369 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/196 (38%), Positives = 111/196 (56%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ ++RY+LL GGK++R L L N A+ A+E IH SLIHDDLP MD Sbjct: 104 KIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMD 163 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT HI + E A++AG+ LL AFE I+ + + + L IG Sbjct: 164 NDDLRRGKPTNHIVFGEDVAVLAGDALLALAFEHIAIATLNVSPARIVRAVGELAKAIGA 223 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E + E ++ I KT L+ A GAIM + E E+LR + Sbjct: 224 EGLVAGQVVDICSEGLSEVGLEKLEFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKY 283 Query: 214 GENLGIIFQLADDLLD 229 ++G++FQ+ DD+LD Sbjct: 284 ARDIGLLFQVVDDILD 299 >gi|126727249|ref|ZP_01743085.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium HTCC2150] gi|126703458|gb|EBA02555.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium HTCC2150] Length = 287 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 124/200 (62%), Gaps = 9/200 (4%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 +A+ +A+ GGK++R FLV E ASL V AL AA+E +H YSL+HDDLP MD+ + Sbjct: 31 AAMAHAVTGGKRLRGFLVLEGASLHGVAANDALNAAAAVEALHAYSLVHDDLPCMDDDDL 90 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG+PTVH+++D TA++AG+ L T AF++++ T + + + L+ + G GM+ Sbjct: 91 RRGQPTVHVKWDYATAVLAGDALQTLAFDLLAD--TPVSADRQISLIKGMAVASGAAGMV 148 Query: 161 GGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 GQ +DI E +D + ++Q KTGAL+ ++ E+G I+A ++ + + Sbjct: 149 LGQAMDIAAETAETPLDLNAITLLQANKTGALIRWSAEAGPILAG---DDPTPMCDYATA 205 Query: 217 LGIIFQLADDLLDCEEDLPK 236 LG+ FQ+ADD+LD E D K Sbjct: 206 LGLAFQIADDILDIEGDAAK 225 >gi|78357244|ref|YP_388693.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219649|gb|ABB38998.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 304 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 81/195 (41%), Positives = 121/195 (62%), Gaps = 4/195 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL A+ Y+LL GGK++R L A LF + L AAIE IH YSL+HDDLP+MD+ Sbjct: 40 LLKAMDYSLLAGGKRLRPVLCLTTAGLFGLARDAVLPFAAAIELIHTYSLVHDDLPAMDD 99 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P+ H ++ E TAI+AG+GLLT AF +++S ++ + + + G Sbjct: 100 DDLRRGMPSNHKKFGEATAILAGDGLLTEAFCLMASAGAAVEASRVLSALSVVAAAAGAG 159 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQ---KMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQMLD++ + + M++ MKTGAL+ +C +GA++A A + ER+ +G Sbjct: 160 GMVGGQMLDMEYTGRADVSLDMLRGMHAMKTGALIRCSCLAGALLAGAPHEDAERISHYG 219 Query: 215 ENLGIIFQLADDLLD 229 E +G FQ+ DD+LD Sbjct: 220 EAIGAAFQIVDDILD 234 >gi|260101429|ref|ZP_05751666.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM 20075] gi|260084769|gb|EEW68889.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM 20075] gi|328465627|gb|EGF36850.1| Geranyltranstransferase [Lactobacillus helveticus MTCC 5463] Length = 289 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 80/232 (34%), Positives = 124/232 (53%), Gaps = 37/232 (15%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL------ 70 ++DD L A H+ ++ +++ +S I Y+++ GGK++R L L +N L Sbjct: 14 VIDDYL---AKHLASEVDNQKISQIMAYSVMAGGKRLRPLLF-----LATLNTLGRKIDE 65 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 +R+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + Sbjct: 66 PEIRIVCGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQW 125 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----------EFIDETQVFMI 180 I+ +QL+ +T +G GM+GGQ LDI +FI++ + Sbjct: 126 IAEGSQS------AQLVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKFINQ-----M 174 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + +KTG L+ + E A+ A AS E+ +L F + G +Q+ DDL+D E Sbjct: 175 EWLKTGCLIQASVEMAAVYAKASDIEQVKLIDFAKAFGRSYQIYDDLVDVVE 226 >gi|251792484|ref|YP_003007210.1| geranyltranstransferase [Aggregatibacter aphrophilus NJ8700] gi|247533877|gb|ACS97123.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Aggregatibacter aphrophilus NJ8700] Length = 296 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 80/198 (40%), Positives = 117/198 (59%), Gaps = 6/198 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ A++Y LL GGK+IR FLV + N AAIE IH YSLIHDDLP+MD+ Sbjct: 33 LVEAMKYGLLLGGKRIRPFLVYATGRILGANLAHLDYAAAAIEAIHAYSLIHDDLPAMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG T HI +DE TAI+AG+ L ++AFEI++ L + L+ +L+ G++ Sbjct: 93 DELRRGHKTCHIAFDEATAILAGDALQSFAFEILTD-IPDLSAQQKLALIKTLSAAAGVK 151 Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCF 213 GM GQ LD+ + + I T++ I KTGAL+ A + G I + +E ++L + Sbjct: 152 GMCLGQSLDLISEQKAISLTELEHIHLNKTGALLTAALKLGFICSPHFADEALLQQLERY 211 Query: 214 GENLGIIFQLADDLLDCE 231 +G+ FQ+ DD+LD E Sbjct: 212 ATAIGLAFQVQDDILDIE 229 >gi|242310626|ref|ZP_04809781.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT 98-5489] gi|239523024|gb|EEQ62890.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT 98-5489] Length = 288 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 5/187 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R L+ + + A A+E +H YSLIHDDLP+MDN +RRG T+ Sbjct: 41 GGKRFRPKLLLSIVDAYKPKSIQKAFSSALALEILHTYSLIHDDLPAMDNADLRRGAQTL 100 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H +YDE AI+ G+ L T++F I++ K LK I+++L+ L++N G+ GM+ GQ LD Sbjct: 101 HCKYDECGAILIGDALNTHSFYCIATSK--LKPKIKNKLIKILSYNGGIYGMVLGQALDC 158 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + + + + I KT L+ + + G I+A + + L G +LG+ FQ+ D Sbjct: 159 YFEKQTLPLKDLRTIHLNKTAKLIAASLQMGGIIAKCDKTTCKTLYKIGLDLGLFFQIRD 218 Query: 226 DLLDCEE 232 D++D + Sbjct: 219 DIIDATQ 225 >gi|160938274|ref|ZP_02085629.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC BAA-613] gi|158438647|gb|EDP16404.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC BAA-613] Length = 305 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 119/215 (55%), Gaps = 8/215 (3%) Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIEC 81 L+ T +T H + A+ Y++ GGK++R L+ E LF L A + AA+E Sbjct: 23 LIGTYLPEETGHQKTIFEAMNYSMKAGGKRLRPMLMQEMCRLFTGTLLEAVIPFMAAVEM 82 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKD 140 IH SL+HDDLP MD+ +RRGK + +Y E ++ G+ L+ YAFE ++ +T + Sbjct: 83 IHTSSLVHDDLPCMDDDMMRRGKASTWAEYGEDIGVLTGDALMMYAFETAANAFETSIDP 142 Query: 141 NIRSQL---MLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACES 195 + S++ M L G+ GM+GGQ +D++ I ++ I ++KTGAL+ + Sbjct: 143 DELSRIGRAMGILARKTGVYGMIGGQTVDVELAGGPIPGDKLEFIYRLKTGALIEASMLI 202 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 GA++ A++ + + + +G+ FQ+ DD+LD Sbjct: 203 GAVLGGAAEEDCKIVESLAAKIGMAFQIQDDILDV 237 >gi|227893300|ref|ZP_04011105.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047] gi|227864880|gb|EEJ72301.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047] Length = 289 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 27/227 (11%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVN-HLTALRV 75 ++DD L A H+ + D +S I Y+++ GGK++R L ++ +R+ Sbjct: 14 VIDDYL---AKHLADEVEDPKISQIMAYSVMAGGKRLRPLLFLATLNVLGKKIEEPEIRI 70 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 71 ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGS 130 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----------EFIDETQVFMIQKMKT 185 K L +T +G GM+GGQ LDI +FI++ ++ +KT Sbjct: 131 NSAK------LAAMITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINK-----MEWLKT 179 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G L+ + E A+ A A+ E+ +L F + G +Q+ DDL+D E Sbjct: 180 GCLIQASVEMAAVYARATDIEQVKLVDFAKAFGRSYQIYDDLVDVVE 226 >gi|258591119|emb|CBE67414.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [NC10 bacterium 'Dutch sediment'] Length = 312 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 85/244 (34%), Positives = 123/244 (50%), Gaps = 23/244 (9%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L E +D L+ L Q + + H A+RY++ GGK++R L+ Sbjct: 10 LDERRLLVDEALEQYLPQASDPPKEIHE-----AVRYSVFAGGKRLRPILILAATEAAGG 64 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AL AAIE IH YSLIHDDLP+MD+ RRG+ T H Y E AI+AG+ LLT A Sbjct: 65 QMEQALGAAAAIEMIHTYSLIHDDLPAMDDDDYRRGRLTCHKVYGEAMAILAGDALLTQA 124 Query: 128 FEIISSP---------------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDE 170 F ++S+ K R ++ + G +GM+GGQ++D+ +D Sbjct: 125 FILLSAENPPCPPLAKGGWGDLKGVYDSEARLMVIREIAEAAGSKGMVGGQVVDMLQEDR 184 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ID + + + KTGAL+ G I+A A + E L +GE +G+ FQ+ DD+LD Sbjct: 185 EIDLPTLTYLHEHKTGALIRVCLRVGGILASAGSEQMEALTRYGERIGLAFQIVDDILDL 244 Query: 231 EEDL 234 E L Sbjct: 245 EGSL 248 >gi|119945899|ref|YP_943579.1| geranyltranstransferase [Psychromonas ingrahamii 37] gi|119864503|gb|ABM03980.1| farnesyl-diphosphate synthase [Psychromonas ingrahamii 37] Length = 296 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 ALLGGK++R FLV + + + + AA+ECIH YSLIHDDLP+MD+ +RRG+ Sbjct: 41 ALLGGKRVRPFLVYAVGDMLGCSLQSLDPLAAAVECIHAYSLIHDDLPAMDDDDLRRGQM 100 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T H ++DE TAI+AG+ L T AF+IIS P + + +++ L G GM GQ L Sbjct: 101 TCHKKFDEATAILAGDALQTLAFDIISMPNKAITAQAQLKMVNFLAKAAGDHGMCAGQAL 160 Query: 166 DI--QDEFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQ 222 D+ +++ ++ + I + KTGAL+ A + A+ + ++ + L F + +G+ FQ Sbjct: 161 DLVAENQSVNLVTLQKIHQAKTGALIKVAIQLAAMTKSDLHEDHFQLLNTFADAIGLAFQ 220 Query: 223 LADDLLD 229 + DD+LD Sbjct: 221 VQDDILD 227 >gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109] gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109] Length = 296 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 82/226 (36%), Positives = 124/226 (54%), Gaps = 14/226 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + +R++ LD + + + L A+RY+LL GGK++R L L Sbjct: 11 LGKAKERVEAALD-------GSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGG 63 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AL A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+ LLT A Sbjct: 64 EATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRA 123 Query: 128 FEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183 FE+++ SP + ++ LSL G G++GGQ++D++ E +D + I Sbjct: 124 FEMVALRSPDVPAERLLKVVGELSLVA--GAPGLVGGQVVDLESEGKEVDLETLEYIHLH 181 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ +GAI+ A + + LR + +G+ FQ+ DD+LD Sbjct: 182 KTGALLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDILD 227 >gi|57505616|ref|ZP_00371543.1| geranyltranstransferase (ispA) [Campylobacter upsaliensis RM3195] gi|57016163|gb|EAL52950.1| geranyltranstransferase (ispA) [Campylobacter upsaliensis RM3195] Length = 268 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 5/184 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK R+ L+ + AL A+E IH YSLIHDDLP+MDN RR PT+ Sbjct: 25 GGKYFRAQLLLNVVYFYKKERFKEALDAALALEFIHTYSLIHDDLPAMDNADFRRSTPTL 84 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 H YDE TAI+ G+ L T AF ++S + L I +L+ +L N GL GM+ GQ +D Sbjct: 85 HKSYDETTAILVGDALNTEAFLLLS--RLNLSATISLKLVETLAFNAGLNGMIIGQAIDC 142 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D+ ++ ++ + KT L+ + + G + + ++L G LG+IFQ+ D Sbjct: 143 YFEDQKLNLKELEFLHTHKTAKLIAASLKMGCQICELDETITKQLYELGLKLGLIFQIND 202 Query: 226 DLLD 229 D++D Sbjct: 203 DIID 206 >gi|28867927|ref|NP_790546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str. DC3000] gi|213969291|ref|ZP_03397429.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1] gi|301381795|ref|ZP_07230213.1| geranyltranstransferase [Pseudomonas syringae pv. tomato Max13] gi|302061005|ref|ZP_07252546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato K40] gi|302130543|ref|ZP_07256533.1| geranyltranstransferase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851163|gb|AAO54241.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str. DC3000] gi|213925969|gb|EEB59526.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1] Length = 295 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 128/229 (55%), Gaps = 12/229 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ L+ L + + RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALEGLFQAPSPEL-----SRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +P ++ R Q++ +L G GM+GGQ +D+ +D+ + + + KT Sbjct: 122 TALLAPHLSSRNAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 182 GALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESD 230 >gi|315634196|ref|ZP_07889485.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393] gi|315477446|gb|EFU68189.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393] Length = 296 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 85/235 (36%), Positives = 130/235 (55%), Gaps = 15/235 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 + E+ + + ++ L + +H+ + L A++Y LL GGK+IR FLV + Sbjct: 3 QFSEDLQHVQQRINHFLAEQFAHLDSAPAP-LADAMKYGLLLGGKRIRPFLVYATGRMLG 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + AAIE IH YSLIHDDLP+MD+ +RRG T HI +DE TAI+AG+ L + Sbjct: 62 ADLAQLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHKTCHIAFDEATAILAGDALQAF 121 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--- 183 AFEI++ T L + L+ +L+ G++GM GQ LD+ I E +V +Q++ Sbjct: 122 AFEILTDIPT-LSAEQKLALIKTLSAASGVKGMCLGQSLDL----ISEHKVISLQELEHI 176 Query: 184 ---KTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ A G I + A + ++L + +G+ FQ+ DD+LD E D Sbjct: 177 HLNKTGALLTAALMMGFICSPHFAEKALAQQLERYATAIGLAFQVQDDILDIEGD 231 >gi|32471772|ref|NP_864766.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula baltica SH 1] gi|32397143|emb|CAD72450.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula baltica SH 1] Length = 317 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 116/217 (53%), Gaps = 13/217 (5%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 LQ A + +RL +AIRYA+L GK++R L A + +A+ A+E IH Sbjct: 35 LQAACEDRPGVPERLAAAIRYAVLAPGKRLRPMLTIMAAEACGGDAESAMPSAVAVEMIH 94 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+AG+ L + AF + + + Sbjct: 95 AYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAGDALQSMAFAHLHHSTSDATKS-- 152 Query: 144 SQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDE--------TQVFMIQKMKTGALMCFAC 193 + L+ +L G G++GGQ LD + +++ + I KTGAL Sbjct: 153 AALIGTLATAAGPAGLVGGQADDLDAEKYTVEDFGGADAALKHLEAIHHRKTGALFTACA 212 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 GAI A A N L + + G+ FQ+ DDLLDC Sbjct: 213 AMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDC 249 >gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5] gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5] Length = 295 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 10/227 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 + R+D + L + + RL A+RY+++ GGK++R L Sbjct: 9 SQARVDAAMHTLFTAPSPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPE 63 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 64 QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSA 123 Query: 131 ISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187 + P + IR +++ +L G GM+GGQ +D+ +D+ + + + KTGA Sbjct: 124 LLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGA 183 Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ + GA+ + A + E + L+ + + +G+ FQ+ DD+LD E D Sbjct: 184 LIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESD 230 >gi|256545252|ref|ZP_05472617.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170] gi|256399079|gb|EEU12691.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170] Length = 277 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 81/231 (35%), Positives = 121/231 (52%), Gaps = 22/231 (9%) Query: 12 NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---- 65 N ++ D IL D ++ A + ++ L ++ YA GK+IR + E + Sbjct: 2 NKEKFDKILIADKNIIDMAMIKKFDEDNPLSESLIYASDSGKRIRPVVFLETIKMLLGEG 61 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 +V+ + + A+E +H YSL+HDD+P MDN RRGK TVH +Y E AI+ G+ LL+ Sbjct: 62 SVDE-KLIDLSLALEMVHAYSLVHDDMPCMDNDDYRRGKLTVHKKYGEDLAILVGDSLLS 120 Query: 126 YAFEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDI---QDEFIDETQVF 178 YAFEII L +I Q L L G GM+ GQ+ DI +DE I+ + Sbjct: 121 YAFEII------LDLSIYDQRFLEAGKYLAKACGKDGMIKGQVFDIKSKKDENIE--YIL 172 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + K KT L A A+ A+ +++ E+L + LG+ FQL DD+LD Sbjct: 173 DVYKNKTARLFMAAIMMAALYANVEKDKLEKLENYAYYLGLAFQLQDDILD 223 >gi|186510058|ref|NP_188073.2| GGPS3 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 3); farnesyltranstransferase [Arabidopsis thaliana] gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana] Length = 360 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 79/197 (40%), Positives = 113/197 (57%), Gaps = 11/197 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + TA+ A+E IH SLIHDDLP MDN + Sbjct: 96 AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 155 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H Y E A++AG+ LL AFE +SS + IR+ ++ L IG Sbjct: 156 RRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFVSSGLVAPERMIRA--VVELARAIGTT 213 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQM+D+ E ++ +V + I KT AL+ A G IM ++ E E+LR Sbjct: 214 GLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRK 273 Query: 213 FGENLGIIFQLADDLLD 229 + +G++FQ+ DD+LD Sbjct: 274 YARCIGLLFQVVDDILD 290 >gi|291514401|emb|CBK63611.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301] Length = 323 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 114/201 (56%), Gaps = 16/201 (7%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + I Y+L GG K++R L+T +F+ + AL AA+E H ++L+HDD+ MDN Sbjct: 27 LYAPIGYSLAGGGKRLRPMLLTLSCGIFSDDVKQALPAAAAVEVFHNFTLLHDDI--MDN 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKP+VH ++ + AI++G+ ++ YA+ ++SS L + LS + + L+ Sbjct: 85 AAVRRGKPSVHAKWGQNVAILSGDAMMIYAYRLLSSVPANLLPQV-----LSTFNTMALE 139 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERLRC 212 + GQ D+ +F + +V +++ M KT L+ + GA++ AS + RLR Sbjct: 140 -VCEGQQYDM--DFEQKPKVSVVEYMHMIELKTSVLLAGSVVIGAMLGGASDEDCRRLRR 196 Query: 213 FGENLGIIFQLADDLLDCEED 233 F LG+ FQL DDLLD D Sbjct: 197 FAVELGLAFQLQDDLLDSYGD 217 >gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp. lyrata] gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp. lyrata] Length = 356 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/231 (32%), Positives = 117/231 (50%), Gaps = 14/231 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S + SK ++ +LD+ + ++ + A+RY LL GGK++R L L Sbjct: 62 SYMIRKSKSVNEVLDEAVPLCEPVLKIRE------AMRYTLLSGGKRVRPMLCLAACELV 115 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 TA+ A+E IH SLI DDLP MD+ +RRGKPT H + E AI+A + L+ Sbjct: 116 GGQESTAMPCACAVEMIHASSLIQDDLPCMDDDNLRRGKPTNHKVFGENIAILAVDALIA 175 Query: 126 YAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDET---QVF 178 A + + S + +L + +G +G++ GQ D+ E F ++T + Sbjct: 176 LAIKHTVESTSLDVPPERVLLAILEMARAVGTEGLVAGQAADLDGEGKSFDNDTGLKHLE 235 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I KT AL+ A GAIM S E ER+R + +G++FQ+ DD+LD Sbjct: 236 FIHIHKTAALLEAAAVMGAIMGGGSDEEIERIRSYARCIGLMFQVVDDVLD 286 >gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp. lyrata] gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp. lyrata] Length = 360 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 113/200 (56%), Gaps = 11/200 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L N TA+ A+E IH SLIHDDLP MDN + Sbjct: 96 AVRYSLLAGGKRVRPMLCIASCELVGGNEATAMPAACAVEMIHTSSLIHDDLPCMDNADL 155 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H + E A++AG+ LL AFE ++SS + IR+ + L IG Sbjct: 156 RRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVPPERMIRA--VAELARAIGTT 213 Query: 158 GMLGGQMLDIQDEFIDE-----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQM+D+ E ++ ++ I KT AL+ A G IM ++ E E+LR Sbjct: 214 GLVAGQMIDLASERLNPHDAGLERLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRK 273 Query: 213 FGENLGIIFQLADDLLDCEE 232 + +G++FQ+ DD+LD E Sbjct: 274 YARCIGLLFQVVDDILDVTE 293 >gi|116052080|ref|YP_789076.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14] gi|254242726|ref|ZP_04936048.1| geranyltranstransferase [Pseudomonas aeruginosa 2192] gi|313109486|ref|ZP_07795442.1| geranyltranstransferase [Pseudomonas aeruginosa 39016] gi|115587301|gb|ABJ13316.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14] gi|126196104|gb|EAZ60167.1| geranyltranstransferase [Pseudomonas aeruginosa 2192] gi|310881944|gb|EFQ40538.1| geranyltranstransferase [Pseudomonas aeruginosa 39016] Length = 295 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 10/224 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+D LD L + +Q RL A+RY+++ GGK++R L A Sbjct: 12 RVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRAD 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL AFE+++ Sbjct: 67 AAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD 126 Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190 + +++ ML+ L G GM+GGQ +D+ + D+ + ++ + KTGAL+ Sbjct: 127 TRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIE 186 Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ + A L + E +G+ FQ+ DD+LD E D Sbjct: 187 ASVRLGALASGRAEPAALAALERYAEAIGLAFQVQDDILDVESD 230 >gi|62959239|gb|AAY23727.1| farnesyl diphosphate synthase [Nocardia sp. JL-538] Length = 145 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/146 (40%), Positives = 90/146 (61%), Gaps = 4/146 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLPSMDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + + Q+++ Sbjct: 1 HDDLPSMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205 L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 E + L + +N+G+ FQ+ DD+LD E Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145 >gi|327541916|gb|EGF28424.1| Polyprenyl synthetase [Rhodopirellula baltica WH47] Length = 315 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 117/215 (54%), Gaps = 16/215 (7%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RL +A+RYA+L GK++R L A + +A+ A+E IH YSLIHDDLP+M Sbjct: 45 ERLAAAVRYAVLAPGKRLRPMLTIMAAEACGGDAESAMPSAVAVEMIHAYSLIHDDLPAM 104 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRG+PT HI++DE TAI+AG+ L + AF + + + + L+ +L G Sbjct: 105 DDDDLRRGRPTTHIEFDEATAILAGDALQSMAFAHLHHSTSDATKS--AALIGTLATAAG 162 Query: 156 LQGMLGGQM--LDIQDEFIDE--------TQVFMIQKMKTGALMCFACESGAIMAHASQN 205 G++GGQ LD + +++ + I KTGAL GAI A A N Sbjct: 163 PAGLVGGQADDLDAEKYTVEDFGGADAALKHLEAIHHRKTGALFTACAAMGAISAGADTN 222 Query: 206 EKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 L + + G+ FQ+ DDLLDC +E L K+ Sbjct: 223 AVSALTDYAKAFGLAFQITDDLLDCTSTDEQLGKR 257 >gi|114566119|ref|YP_753273.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337054|gb|ABI67902.1| farnesyl-diphosphate synthase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 301 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/231 (33%), Positives = 126/231 (54%), Gaps = 10/231 (4%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 ++++ + +D L LL S H A+ YA+ GGK++R +V E A + Sbjct: 11 EIRQRKEFVDNCLIGCLLSPDSDPPLIHQ-----AMHYAIFNGGKRLRPIMVLEGAKIAG 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 A+ V A+E IH YSL+HDDLP MD+ RRG+PT H + E A++ G+ LLT Sbjct: 66 GEAEQAIPVACALEMIHSYSLVHDDLPCMDDDDFRRGQPTCHRVFGEANAVLTGDALLTA 125 Query: 127 AFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182 AFE++S + +K + +++ + G +GM+GGQ+LD++ E ID + + Sbjct: 126 AFELLSEKNSVSGIKPDTTLRVIAEIARASGSRGMIGGQILDLEAEGKIIDYESLRKLHC 185 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +KTG L A +GAI+ + L + +N G+ FQ++DD+LD + D Sbjct: 186 LKTGQLFRAALRTGAIVGGIGEKGLLALSDYADNFGLAFQISDDILDVQGD 236 >gi|326572218|gb|EGE22213.1| geranyltranstransferase [Moraxella catarrhalis BC8] Length = 328 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 122/246 (49%), Gaps = 36/246 (14%) Query: 24 LLQTASHM------QTQHNDRLL--------------SAIRYALL-GGKKIRSFLVTECA 62 +Q A H+ QT+H +LL +A RYA+ GGK++R L Sbjct: 17 FIQNAKHLDQVRQWQTEHLPKLLDLILTQASLPEPLNAACRYAMSNGGKRVRPLLALSTF 76 Query: 63 SLF-----NVNHLTAL--------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 + + NH L R A+E IH YSLIHDDLP MD+ +RRG+PT HI Sbjct: 77 LMLIQTGDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHI 136 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 Y E A++AG+ L + AFE++S + + L+ + + M+ GQMLDI+ Sbjct: 137 VYGEDIALLAGDALQSIAFEVLSEYYEEAPADEAVAYRLTQILSTRARRMVSGQMLDIKG 196 Query: 170 E--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 E + + ++ I + KTGAL+ + GA+ A A L+ + +G+ FQ+ DD+ Sbjct: 197 ENQVLTQDELEAIHRDKTGALIEASVMMGAVCAGAQTAALGHLKRYARAIGLAFQVQDDV 256 Query: 228 LDCEED 233 LD D Sbjct: 257 LDITTD 262 >gi|126642791|ref|YP_001085775.1| geranyltranstransferase [Acinetobacter baumannii ATCC 17978] Length = 259 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 76/193 (39%), Positives = 114/193 (59%), Gaps = 13/193 (6%) Query: 47 LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 +LGGK++R L ASL N N A R A+E IHCYSL HDDLP MDN +RRG+P Sbjct: 1 MLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQP 60 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLMLSLTHNIGLQGM 159 T H+ + E TA++AG+ L + AFE++ S + Q D + Q+ + T + M Sbjct: 61 TCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATAS---SKM 117 Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGEN 216 + GQ+LD+Q E I + ++ I + KTGAL+ A GA+ + ++ +LR +G+ Sbjct: 118 VCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQA 177 Query: 217 LGIIFQLADDLLD 229 +G+ FQ+ DD+LD Sbjct: 178 IGLAFQVQDDILD 190 >gi|194290326|ref|YP_002006233.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Cupriavidus taiwanensis LMG 19424] gi|193224161|emb|CAQ70170.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Cupriavidus taiwanensis LMG 19424] Length = 294 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 114/228 (50%), Gaps = 9/228 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 +Q R + L L + T H A+RYA L GGK++R LV + Sbjct: 8 MQAQGARTEAALQAALPDAGTVPHTLHE-----AMRYAALSGGKRVRPLLVHAAGEVSGA 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+ L T A Sbjct: 63 APAACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQTQA 122 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185 F +++ + + +R QL+ L G GM GGQ +D+Q+ + + + +MKT Sbjct: 123 FIVLAGAEP-IAPAVRLQLVAELARASGSAGMAGGQAIDLQNVGRAMTRDALEAMHRMKT 181 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ L + +G+ FQ+ DD+LD D Sbjct: 182 GALLRASVRMGALCGEIDAAGLAALDRYAAAVGLAFQVVDDILDVTAD 229 >gi|27228290|gb|AAN85596.1| Geranylgeranyl Pyrophosphate Synthase [Pantoea stewartii] Length = 303 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/226 (34%), Positives = 121/226 (53%), Gaps = 12/226 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN--VNHLTA 72 ID+ LD LL +Q + D + +A+R L GK+IR L+ A ++H Sbjct: 23 IDSRLDQLL-----PVQGE-RDCVGAAMREGTLAPGKRIRPMLLLLTARDLGCAISHGGL 76 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L + A+E +H SLI DD+P MD+ +RRG+PT+H QY E AI+A LL+ AF +I+ Sbjct: 77 LDLACAVEMVHAASLILDDMPCMDDAQMRRGRPTIHTQYGEHVAILAAVALLSKAFGVIA 136 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190 + L +++ + L+ IG+QG++ GQ D+ D+ + + + KT L C Sbjct: 137 EAEG-LTPIAKTRAVSELSTAIGMQGLVQGQFKDLSEGDKPRSADAILLTNQFKTSTLFC 195 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + +I A+AS +E L F +LG FQL DDL D D K Sbjct: 196 ASTQMASIAANASCEARENLHRFSLDLGQAFQLLDDLTDGMTDTGK 241 >gi|91776484|ref|YP_546240.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT] gi|91710471|gb|ABE50399.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT] Length = 296 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 133/234 (56%), Gaps = 15/234 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65 S + +R++ LD+LL AS++ RL A+RYA+LGG K++R+ L L Sbjct: 6 SWARHTQQRMEHTLDNLL--PASYIAPT---RLHEAMRYAVLGGGKRVRALLAHAAGELC 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 AA+E IH YSL+HDD+P MD+ +RRGKP+ H QYD+ TA++ G+ L T Sbjct: 61 GAAPEKVDIAAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQT 120 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKM 183 AF+ +++P + +++ L G +GM GGQ +D+ + ++++++ + Sbjct: 121 LAFQSLATPGLCTDPGRQLEMVSLLAIASGSRGMAGGQAIDLDSVGKALEQSELEYMHIH 180 Query: 184 KTGALMCFACESGAIMAHASQN-EKERLRC---FGENLGIIFQLADDLLDCEED 233 KTGAL+ A G AH + + ++ERL + + +G+ FQ+ DD+LD E D Sbjct: 181 KTGALIRAAALLG---AHCANDLDQERLHAIDHYAQAIGLAFQVVDDILDAEAD 231 >gi|218264432|ref|ZP_03478283.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii DSM 18315] gi|218222005|gb|EEC94655.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii DSM 18315] Length = 324 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 113/200 (56%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR LV +L+ N A++ +E H ++L+HDDL MD Sbjct: 27 LYEPIEYILSLGGKRIRPALVLMACNLYKENVDIAIKPALGLEVFHNFTLLHDDL--MDE 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156 RR KPTVH +++ TAI++G+ +L A+++I K++ LK+ +L L L Sbjct: 85 ADKRRNKPTVHKVWNDNTAILSGDAMLIAAYQLIGETKSESLKE------ILDLFTRTAL 138 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + + GGQ D++ E + E + + ++KT L+ A + GAIM +A + + E L F Sbjct: 139 E-ICGGQQYDMEFESRTDVTEAEYIEMIRLKTAVLLACALKMGAIMGNAPEADAEALYQF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G N+G+ FQL DDLLD D Sbjct: 198 GINIGLAFQLQDDLLDVYGD 217 >gi|2497459|sp|Q45220|ISPA_BRAJA RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|529967|gb|AAC28894.1| putative dimethylallyltranstransferase; ORF6; similar to E. coli dimethylallyltranstransferase, Swiss-Prot Accession Number P22939 (Fujisaki et al., J. Biochem. 108:995-1000(1990) [Bradyrhizobium japonicum USDA 110] Length = 332 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 121/232 (52%), Gaps = 14/232 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 +Q+ +KR++ L LL + L++A+RYA L GGK+ R+ L +L + Sbjct: 37 MQDGAKRVEEALARLLCA-----EDDGETELMAAMRYATLHGGKRTRALLCLAAGALADT 91 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 VGAAIE +H +L+HDDLP+MD+ +RRG PTVH+++ E TAI+ G+ L +A Sbjct: 92 PAHMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAHA 151 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185 F ++S I L+ L + +G GGQ +D+ + ++ ++ + +MK+ Sbjct: 152 FLTLASLNAPGDSPI--ALVRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKS 209 Query: 186 GALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ A L C + G+ Q+ DD+LD D Sbjct: 210 GALVRASVRMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTAD 261 >gi|27377259|ref|NP_768788.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110] gi|27350402|dbj|BAC47413.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110] Length = 335 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 121/232 (52%), Gaps = 14/232 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 +Q+ +KR++ L LL + L++A+RYA L GGK+ R+ L +L + Sbjct: 40 MQDGAKRVEEALARLLCA-----EDDGETELMAAMRYATLHGGKRTRALLCLAAGALADT 94 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 VGAAIE +H +L+HDDLP+MD+ +RRG PTVH+++ E TAI+ G+ L +A Sbjct: 95 PAHMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAHA 154 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185 F ++S I L+ L + +G GGQ +D+ + ++ ++ + +MK+ Sbjct: 155 FLTLASLNAPGDSPI--ALVRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKS 212 Query: 186 GALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ A L C + G+ Q+ DD+LD D Sbjct: 213 GALVRASVRMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTAD 264 >gi|313887972|ref|ZP_07821650.1| putative geranyltranstransferase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845927|gb|EFR33310.1| putative geranyltranstransferase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 285 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 92/235 (39%), Positives = 135/235 (57%), Gaps = 28/235 (11%) Query: 20 LDDLLLQTASHMQT--------QHNDRLLSAIRYALL-GGKKIRSFL--VTECASLFNVN 68 LD+LL + +++ + QH +++ +++Y+L GGK+IR L +T C F+ + Sbjct: 4 LDNLLEKFNNYLSSLLEYDNSPQH--KVIDSMKYSLFSGGKRIRPLLSLITFCE--FSED 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L L AAIE IH YSLIHDDLP+MD+ RR KPT H Y E AI+AG+GLL + Sbjct: 60 SLDKILPFAAAIEMIHTYSLIHDDLPAMDDDDFRREKPTNHKVYSEGIAILAGDGLLNMS 119 Query: 128 FEI-------ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VF 178 EI I P+ LK +R+ M + + G+ GM+GGQ +DI + D T+ Sbjct: 120 MEILLRHIENIEDPE-DLKRAMRA--MKYIYNATGVNGMIGGQTIDISRDVSDYTEDDCE 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + K+KTGAL+ + G I+A + +L FGE++GI +Q DDLLD E+D Sbjct: 177 NMYKLKTGALIKASVVVGGIIAGLDPDNITKLARFGESIGIAYQFEDDLLDEEKD 231 >gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens] Length = 352 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 16/208 (7%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T ++ ++RY+LL GGK++R + +F A+ AIE IH SLIHDD Sbjct: 81 TPETKIIVESMRYSLLAGGKRVRPVMCIAACEMFGGTEAMAMPTAVAIEMIHTMSLIHDD 140 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISS-----PKTQLKDNIRS 144 LP+MDN +RRG PT H+ Y + AI+AG+ LL+ +FE + S P ++ + IR Sbjct: 141 LPAMDNDDLRRGMPTNHVIYGDDVAILAGDALLSTSFEHCAVGSTAEGIPAERIVETIR- 199 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAH 201 L +G G+ GGQ++D++ E + ++ I KT L+ + +GA++A Sbjct: 200 ----RLGEAVGAVGLAGGQVMDLECEAKSGVSLEELTWIHTHKTAKLLEVSVAAGAVLAG 255 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229 A++++ + + ++GI FQ+ADD+LD Sbjct: 256 AAKDDVRQCETYANDIGIAFQVADDILD 283 >gi|218960663|ref|YP_001740438.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase) (Farnesyltranstransferase) [Candidatus Cloacamonas acidaminovorans] gi|167729320|emb|CAO80231.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase) (Farnesyltranstransferase) [Candidatus Cloacamonas acidaminovorans] Length = 296 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 82/230 (35%), Positives = 130/230 (56%), Gaps = 10/230 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L ++E + ++ ILD L + + + H A+RY++ GGK++R +L Sbjct: 7 LKKDMKEKQELVNIILDRFLPRKDEYPKDLHK-----AMRYSVFAGGKRLRPYLTMTAFE 61 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +FN N V A IE IH YSLIHDDLP +DN RRGK + H + E A++AG+ L Sbjct: 62 MFNSNIELITPVAAGIEMIHTYSLIHDDLPDIDNDDFRRGKKSCHTIFGEGVALLAGDAL 121 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 L AFE+I+ +L +R Q + L +G++G++ GQM+DI+ E +D+ + I Sbjct: 122 LLSAFELITL--AELDAKLRVQFVHELAKEVGIKGLIAGQMVDIESEGKKVDKKTLHYIH 179 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + KT L+ + GA+ A + E + L +G+ +G++FQ+ DDLLD E Sbjct: 180 ENKTARLINLSLRFGALAGEAKEEELKILDEYGKLIGLVFQIVDDLLDIE 229 >gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis] Length = 369 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 119/221 (53%), Gaps = 7/221 (3%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTAL 73 +++ ++ + + ++ +++ ++RY++L K R + C ++ AL Sbjct: 85 NSVRKEMEAELEKSVPLRYPEKIHVSMRYSVLAEKAKRGPPMMCIAACEAVGGSKQ-QAL 143 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E +H SLIHDDLP MD+ IRRG+P+ H + A++AG+ L FE I S Sbjct: 144 PTACALEMVHTASLIHDDLPCMDDDPIRRGQPSNHTVFGVDMAVLAGDALFPLGFEYIVS 203 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMC 190 + + + +++ + +G QGM+ GQ +D+ + D + V I + K G + Sbjct: 204 STSDVPPDRIVKVIAQIAKTVGSQGMVVGQYMDLGSTGNNKFDPSLVEFIHERKFGIMAE 263 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + +G I+ A+ E ERLR +G ++G+++Q+ADD+L+ E Sbjct: 264 CSAVTGGIIGGATDEEVERLRNYGRSVGVLYQIADDILEEE 304 >gi|293392228|ref|ZP_06636562.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952762|gb|EFE02881.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 296 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 81/204 (39%), Positives = 116/204 (56%), Gaps = 14/204 (6%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A++Y LL GGK+IR FLV + + AAIE IH YSLIHDDLP+MD+ Sbjct: 33 LAEAMKYGLLLGGKRIRPFLVYATGKMLGADMAHLDYAAAAIEAIHAYSLIHDDLPAMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG T HI +DE TAI+AG+ L T AFEI++ L + L+ +L+ G++ Sbjct: 93 DELRRGHQTCHIAFDEATAILAGDALQTLAFEILTDIP-HLSAEQKLMLIKTLSAAAGVK 151 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMA--HASQNEKER 209 GM GQ LD+ I E ++ +Q++ KTGAL+ A + G I + A ++ Sbjct: 152 GMCLGQSLDL----ISEQKIISLQELEQIHLNKTGALLTAALKMGFICSPHFADAALAQQ 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD E D Sbjct: 208 LERYATAIGLAFQVQDDILDIEGD 231 >gi|261867966|ref|YP_003255888.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413298|gb|ACX82669.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Aggregatibacter actinomycetemcomitans D11S-1] Length = 296 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 81/204 (39%), Positives = 116/204 (56%), Gaps = 14/204 (6%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A++Y LL GGK+IR FLV + + AAIE IH YSLIHDDLP+MD+ Sbjct: 33 LAEAMKYGLLLGGKRIRPFLVYATGKMLGADMAHLDYAAAAIEAIHAYSLIHDDLPAMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG T HI +DE TAI+AG+ L T AFEI++ L + L+ +L+ G++ Sbjct: 93 DELRRGHQTCHIAFDEATAILAGDALQTLAFEILTDIP-HLSAEQKLMLIKTLSAAAGVK 151 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMA--HASQNEKER 209 GM GQ LD+ I E ++ +Q++ KTGAL+ A + G I + A ++ Sbjct: 152 GMCLGQSLDL----ISEQKIISLQELEQIHLNKTGALLTAALKMGFICSPHFADAALAQQ 207 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L + +G+ FQ+ DD+LD E D Sbjct: 208 LERYATAIGLAFQVQDDILDIEGD 231 >gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas acetoxidans DSM 684] gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas acetoxidans DSM 684] Length = 297 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 129/220 (58%), Gaps = 7/220 (3%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78 +++ L QT Q QH +L A+ Y++ GGK++R L+ + L A Sbjct: 14 VEEALAQTLPPKQ-QHPTQLHEAMHYSVFAGGKRLRPILMMAACEAVGGDIENVLPAACA 72 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP--KT 136 +E IH YSLIHDDLP+MD+ +RRG+PT H + E TAI+AG+ LLT AF ++S+P Sbjct: 73 MEMIHTYSLIHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDALLTEAFVVLSAPSDSV 132 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFAC 193 Q+ D R +++ L G GM+GGQ++D++ E +++ V I KTGAL+ + Sbjct: 133 QINDRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQPDLATVDYIHAHKTGALILASI 192 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +GA++ A+ + E L FG+ G+ FQ+ADD+LD D Sbjct: 193 RAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGD 232 >gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis thaliana] Length = 360 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 113/197 (57%), Gaps = 11/197 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + TA+ A+E IH SLIHDDLP MDN + Sbjct: 96 AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 155 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H Y E A++AG+ LL AFE ++SS + IR+ ++ L IG Sbjct: 156 RRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRA--VVELARAIGTT 213 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQM+D+ E ++ +V + I KT AL+ A G IM ++ E E+LR Sbjct: 214 GLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRK 273 Query: 213 FGENLGIIFQLADDLLD 229 + +G++FQ+ DD+ D Sbjct: 274 YARCIGLLFQVVDDIPD 290 >gi|302343358|ref|YP_003807887.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075] gi|301639971|gb|ADK85293.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075] Length = 297 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 111/200 (55%), Gaps = 5/200 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 +L A+RY+L GGK++R L A + A+ A+E IH YSLIHDDLP+MD+ Sbjct: 33 ILKAMRYSLFAGGKRLRPILCLAGAEAVGGDPRRAMFCACALEMIHTYSLIHDDLPAMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIG 155 RRG PT H + + A++AG+GLLT A +++ L Q + G Sbjct: 93 DDYRRGVPTNHKVFGQGMAVLAGDGLLTQAMVLLTDAAAVGDLPAERARQAANVVMRAAG 152 Query: 156 LQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+GGQ D+ E + D V I KTGAL+C + E+G I+A A ++ RL + Sbjct: 153 HLGMVGGQAADLLAETMEPDLAMVDYIHARKTGALICASLEAGGILAGADRDRLSRLVRY 212 Query: 214 GENLGIIFQLADDLLDCEED 233 G +G+ FQ+ADDLLD E D Sbjct: 213 GRRIGLAFQIADDLLDLEGD 232 >gi|195953616|ref|YP_002121906.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1] gi|195933228|gb|ACG57928.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 258 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 104/185 (56%), Gaps = 7/185 (3%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GK+IR L +++ A+ +G A+E IH YSLIHDD+P +DN RRGK Sbjct: 33 YVFQEGKRIRPVLCVIGGYACDLDEEDAITLGCAVEFIHNYSLIHDDMPELDNDDERRGK 92 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 PT H + + A++AG+GLL+ AF+I+S+ ++++ ++ N G++GM+ GQ+ Sbjct: 93 PTCHKIFGQDIALLAGDGLLSLAFDILSNESLYKNPKNLAKVVNYVSKNAGIEGMVAGQV 152 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 DI+ E + +KT AL+ + +I+ + E+L G N+G++FQL Sbjct: 153 YDIK----GEKDFLKVASLKTAALIKTSLVIPSILKGVDFSLYEKL---GHNIGVLFQLT 205 Query: 225 DDLLD 229 DD D Sbjct: 206 DDYYD 210 >gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana] Length = 345 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 106/201 (52%), Gaps = 10/201 (4%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ A+RY LL GK++R L L TA+ AIE +H SLI DDLP MD Sbjct: 77 KIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMD 136 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-G 155 N +RRGKPT HI + E AI+A L+ A + +S + D +++ ++ + Sbjct: 137 NDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTS--STFADVPPERILKTVQEMVKA 194 Query: 156 LQGMLGGQMLDIQDE---FIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 ++G++ GQ D+ E F +T + I KT AL+ A GAIM S E ER Sbjct: 195 VEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIER 254 Query: 210 LRCFGENLGIIFQLADDLLDC 230 LR + +G++FQ+ DD+LD Sbjct: 255 LRSYARCIGLMFQVVDDVLDV 275 >gi|325269799|ref|ZP_08136409.1| polyprenyl synthetase [Prevotella multiformis DSM 16608] gi|324987772|gb|EGC19745.1| polyprenyl synthetase [Prevotella multiformis DSM 16608] Length = 324 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 113/203 (55%), Gaps = 15/203 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L IRY L LGGK+IR L+ +LF + T L A+E H Y+L+HDDL MD+ Sbjct: 27 LYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSPACALETYHNYTLLHDDL--MDD 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+ TVH+++D TAI++G+ +L AFE + L+D +R + +L IG Sbjct: 85 APLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCDDRHLRDVLRLFTVTAL--EIG- 141 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GQ D++ E + E + + ++KT L+ A + GAI+A A + + L F Sbjct: 142 ----EGQQYDMEFEHRNDVTEAEYIEMIRLKTSVLLACAMKIGAILADAPSEDMDNLYKF 197 Query: 214 GENLGIIFQLADDLLDCEEDLPK 236 GE +G+ FQL DD LD D PK Sbjct: 198 GEQIGLAFQLQDDYLDVYGD-PK 219 >gi|269123398|ref|YP_003305975.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112] gi|268314724|gb|ACZ01098.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112] Length = 282 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 8/194 (4%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 LLGGK+IR ++ A+++ + +IE IH YSLIHDDLP MDN RRG Sbjct: 37 VLLGGKRIRPSIMYILANVYKKDKKCIENEAVSIELIHAYSLIHDDLPCMDNDNYRRGNL 96 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +Y E A++ G+ LLT AF +++ + K +I ++L++ G +GM+ GQ L Sbjct: 97 TVHKKYGEANAVLVGDALLTLAFSVLAESEYSNKYSI-----VALSYYSGHKGMILGQYL 151 Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D+ +E I+ ++ I KT L+ + E AI + + LR + LG+ +Q Sbjct: 152 DLLNENKADINFDELMEIHLNKTAMLLMASVEIAAISLSINTEARNALRKYILYLGLAYQ 211 Query: 223 LADDLLDCEEDLPK 236 + DD+L+ E K Sbjct: 212 IQDDILEMESSFEK 225 >gi|15231055|ref|NP_188651.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75273683|sp|Q9LJY2|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10, mitochondrial; Short=GGPP synthase 10; Short=GGPS10; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10; AltName: Full=Dimethylallyltranstransferase 10; AltName: Full=Farnesyl diphosphate synthase 10; AltName: Full=Farnesyltranstransferase 10; AltName: Full=Geranyltranstransferase 10; Flags: Precursor gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana] gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP synthetase/farnesyltranstransferase [Arabidopsis thaliana] gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana] Length = 344 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 106/201 (52%), Gaps = 10/201 (4%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ A+RY LL GK++R L L TA+ AIE +H SLI DDLP MD Sbjct: 77 KIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMD 136 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-G 155 N +RRGKPT HI + E AI+A L+ A + +S + D +++ ++ + Sbjct: 137 NDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTS--STFADVPPERILKTVQEMVKA 194 Query: 156 LQGMLGGQMLDIQDE---FIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 ++G++ GQ D+ E F +T + I KT AL+ A GAIM S E ER Sbjct: 195 VEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIER 254 Query: 210 LRCFGENLGIIFQLADDLLDC 230 LR + +G++FQ+ DD+LD Sbjct: 255 LRSYARCIGLMFQVVDDVLDV 275 >gi|73540584|ref|YP_295104.1| farnesyl-diphosphate synthase [Ralstonia eutropha JMP134] gi|72117997|gb|AAZ60260.1| farnesyl-diphosphate synthase [Ralstonia eutropha JMP134] Length = 294 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 120/232 (51%), Gaps = 9/232 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 S ++ R + LD L + T H A+RYA+LGG K++R LV Sbjct: 4 FASWMRAQGARTEAALDQTLPNADTVPHTLHE-----AMRYAVLGGGKRVRPLLVHAAGE 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+ L Sbjct: 59 VTGASAEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 T AF +++ ++ ++ R +L+ L G GM GGQ +D+Q+ + + + + Sbjct: 119 QTQAFIVLAQAQS-VQAEARLKLVAELAVASGSVGMAGGQAIDLQNVGKAMSRDALEAMH 177 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +MKTGAL+ + GA+ L + +G+ FQ+ DD+LD D Sbjct: 178 RMKTGALLRASVRMGALCGEIDAQGLSALDRYAAAVGLAFQVVDDILDVTAD 229 >gi|325957123|ref|YP_004292535.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC] gi|325333688|gb|ADZ07596.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC] gi|327183847|gb|AEA32294.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1118] Length = 289 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 121/222 (54%), Gaps = 17/222 (7%) Query: 19 ILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFL-VTECASLFNVNHLTALRV 75 ++DD L A H+ + + + +S + Y+++ GGK++R L + +L +R+ Sbjct: 14 VIDDYL---AKHLADEVDSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRI 70 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 71 ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGS 130 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFI--DETQVFMIQKMKTGALMC 190 ++L+ +T +G GM+GGQ LDI +E + D + ++ +KTG L+ Sbjct: 131 NS------AELVKIITQAVGPNGMVGGQYLDIDSTNNESVAGDADFINKMEWLKTGCLIQ 184 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E A+ A A+ E+ +L + + G +Q+ DDL+D E Sbjct: 185 ASVEMAAVYAKATDIEQVKLIDYAKAFGRSYQIYDDLVDVVE 226 >gi|305665579|ref|YP_003861866.1| putative isoprenoid biosynthesis related protein [Maribacter sp. HTCC2170] gi|88710335|gb|EAR02567.1| putative isoprenoid biosynthesis related protein [Maribacter sp. HTCC2170] Length = 334 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 120/225 (53%), Gaps = 13/225 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 ID + + + +T+ L + Y L LGGK++R L +F +H+ A+ Sbjct: 14 IDFYRTEFISYLEKNAKTREPLNLYKPMSYILGLGGKRLRPVLTLMTTEVFGKDHINAMD 73 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 AIE H +SL+HDD+ MD+ +RRGKPTVH ++D T I++G+ +L A+++ + Sbjct: 74 AALAIEIFHNFSLVHDDI--MDDAPLRRGKPTVHEKWDLNTGILSGDAMLIRAYQLFENY 131 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCF 191 ++ D R + L L+ + GQ DI E ++ V KM KT L+ Sbjct: 132 ES---DTFRE--LAQLFSKTALE-VCEGQQYDIDFETREDVTVPEYLKMIEYKTAVLVAA 185 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + G I+A+AS +++ + FG+NLG+ FQL DD LD D PK Sbjct: 186 AMKMGGIIANASSTDQDCIYDFGKNLGLAFQLQDDYLDAFGD-PK 229 >gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii] Length = 360 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 77/192 (40%), Positives = 110/192 (57%), Gaps = 4/192 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++RY+LL GGK+IR L L TA+ A+E IH SLIHDDLP MDN + Sbjct: 99 SMRYSLLAGGKRIRPMLCIAACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL 158 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H Y E A++AG+ LL AFE I++ + + +++ L IG +G++ Sbjct: 159 RRGKPTNHKIYGEDVAVLAGDALLALAFEHIATHTKGVSSDRIVRVIGELAKCIGAEGLV 218 Query: 161 GGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ++DI E I D + I KT AL+ + GAI+ A + E+LR F + Sbjct: 219 AGQVVDIISEGISDVDLKHLEFIHLHKTAALLEGSVVLGAILGGAPDEDVEKLRKFARCI 278 Query: 218 GIIFQLADDLLD 229 G++FQ+ DD+LD Sbjct: 279 GLLFQVVDDILD 290 >gi|15233848|ref|NP_195558.1| GGR (geranylgeranyl reductase); farnesyltranstransferase [Arabidopsis thaliana] gi|85680919|sp|Q39108|GGR_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase-related protein, chloroplastic; Flags: Precursor gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana] gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana] gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana] Length = 326 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 7/203 (3%) Query: 31 MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 + +H + A+RY++L G K+ + LF + L A A+E +H SLI Sbjct: 66 IPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLI 125 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146 HDDLP MD+ +RRGKP+ H Y AI+AG+ L AF+ I S P + +L Sbjct: 126 HDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRL 185 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + + +G GM GQ +D++ + +Q+ K GA+ + G ++ A+++E Sbjct: 186 ITEIARTVGSTGMAAGQYVDLEG---GPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDE 242 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 + LR +G +G+++Q+ DD+ + Sbjct: 243 LQSLRRYGRAVGMLYQVVDDITE 265 >gi|255037310|ref|YP_003087931.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053] gi|254950066|gb|ACT94766.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053] Length = 324 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 110/203 (54%), Gaps = 14/203 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y + LGGK+ R L AS+F+ + A++ A+E H ++L+HDD+ MD Sbjct: 27 LYEPISYIMSLGGKRFRPLLTLLAASIFDTDIDKAIKPAMAVEVFHNFTLMHDDI--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG PTVH ++D TAI++G+ +L A++++ PK QL RS L N Sbjct: 85 APLRRGMPTVHEKWDANTAILSGDVMLIRAYDLLLDIPKEQL----RSVLA---RFNRTA 137 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ LD+ E + E + + ++KT L+ FA E G I+A A + L Sbjct: 138 AEVCEGQQLDMNFEKRWDVTEAEYIGMIRLKTSVLLGFALELGGIIAGADDETVQLLYSA 197 Query: 214 GENLGIIFQLADDLLDCEEDLPK 236 GEN+GI FQL DDLLD D K Sbjct: 198 GENMGIGFQLKDDLLDVYGDPAK 220 >gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana] Length = 326 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 7/203 (3%) Query: 31 MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 + +H + A+RY++L G K+ + LF + L A A+E +H SLI Sbjct: 66 IPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLI 125 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146 HDDLP MD+ +RRGKP+ H Y AI+AG+ L AF+ I S P + +L Sbjct: 126 HDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRL 185 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + + +G GM GQ +D++ + +Q+ K GA+ + G ++ A+++E Sbjct: 186 ITEIARTVGSTGMAAGQYVDLEG---GPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDE 242 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 + LR +G +G+++Q+ DD+ + Sbjct: 243 LQSLRRYGRAVGMLYQVVDDITE 265 >gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa] Length = 314 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 7/202 (3%) Query: 34 QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 Q+ D++ A+RY++L G K+ + LF N A A+E +H SLIHDD Sbjct: 43 QYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRHAAFPTACALEMVHSASLIHDD 102 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQLMLS 149 LP MD+ RRG+P+ H Y AI+AG+ L F I+S + L R ++ Sbjct: 103 LPCMDDDPSRRGQPSNHKIYGVDMAILAGDALFPLGFRHIVSHTPSDLVPEPRLLSVIAE 162 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + +G GM GQ LD++ V +Q+ K G + + G ++A A +E +R Sbjct: 163 IARAVGSTGMAAGQFLDLEG---GPNSVEFVQEKKFGEMGECSAVCGGLLAGAKDDEIQR 219 Query: 210 LRCFGENLGIIFQLADDLLDCE 231 LR +G +G+++Q+ DD+L+ + Sbjct: 220 LRRYGRAVGVLYQVVDDILEAK 241 >gi|160945195|ref|ZP_02092421.1| hypothetical protein FAEPRAM212_02714 [Faecalibacterium prausnitzii M21/2] gi|158442926|gb|EDP19931.1| hypothetical protein FAEPRAM212_02714 [Faecalibacterium prausnitzii M21/2] gi|295105573|emb|CBL03117.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii SL3/3] Length = 293 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 78/191 (40%), Positives = 114/191 (59%), Gaps = 5/191 (2%) Query: 42 AIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A RY+LLGG K+IR+ L + A + AA+E +HCYSLIHDDLP MDN + Sbjct: 35 AARYSLLGGGKRIRAILTLSVCDMLGGEMQVAAQFAAAVEMLHCYSLIHDDLPCMDNDDL 94 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG+P+ H + E TA++AG+ LLT AFE+I++ I +L G +GM+ Sbjct: 95 RRGRPSCHKAFSESTAMLAGDVLLTEAFEVIANASA--TPQICVAAARALGAGAGSRGMV 152 Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GQ LD++ E + E Q+ +I + KTGAL+ A + GA A A+ + + L + LG Sbjct: 153 YGQELDLKYEALAATEEQLRLIHRNKTGALINAAVQMGAAAAGATPQQCKILASYAYGLG 212 Query: 219 IIFQLADDLLD 229 ++FQ+ DD+LD Sbjct: 213 LVFQIVDDVLD 223 >gi|323344513|ref|ZP_08084738.1| polyprenyl synthetase [Prevotella oralis ATCC 33269] gi|323094640|gb|EFZ37216.1| polyprenyl synthetase [Prevotella oralis ATCC 33269] Length = 323 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 111/200 (55%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I+Y L LGGK+IR L+ +L+ + + L AIE H Y+L+HDDL MDN Sbjct: 26 LYEPIKYVLSLGGKRIRPTLMLLAYNLYKDDPQSILSSACAIETYHNYTLLHDDL--MDN 83 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 IRRG+PTVH ++D TAI++G+ +L A+ ++ ++LK+ I L IG Sbjct: 84 AAIRRGRPTVHKKWDANTAILSGDSMLVLAYHYMAQCDGSKLKEVI--DLFTETALEIG- 140 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GQ LD+ E + E + + ++KT L+ + + GAI+A +S + + L F Sbjct: 141 ----EGQQLDMDFETRNDVTEAEYIEMIRLKTSVLLACSLKIGAILAGSSAEDADYLYRF 196 Query: 214 GENLGIIFQLADDLLDCEED 233 GE +G+ FQL DD LD D Sbjct: 197 GEQIGLAFQLQDDFLDVYGD 216 >gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453] gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453] Length = 301 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 130/235 (55%), Gaps = 14/235 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + E R+D+ L +L + +T H ++ Y+L+ GGK++R LV Sbjct: 11 MNEICDRLDSELTNLFPPSWKVPETLHK-----SMSYSLMAGGKRMRPLLVIAACEAGGG 65 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A+ V A+E +H YSL+HDDLP+MD+ RRGKPT H + E +AI+AG+ LLT+A Sbjct: 66 SRDAAIPVACAVEMVHTYSLVHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTHA 125 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 F I Q + ++ +LS+ ++ G +GM+GGQ+ D++ E Q+ I Sbjct: 126 FYSIIQASRQF--GVPAERVLSIVEDLAEYAGPRGMVGGQVADMEGEQGLTTLEQLEYIH 183 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT L+ F+ +G +A ++ + E LR FG ++G+ FQ+ DD+LD D K Sbjct: 184 LHKTSDLIMFSLMAGGHIAGCTEAQIESLRIFGHHIGLAFQIQDDILDLVGDESK 238 >gi|259046628|ref|ZP_05737029.1| geranyltranstransferase [Granulicatella adiacens ATCC 49175] gi|259036793|gb|EEW38048.1| geranyltranstransferase [Granulicatella adiacens ATCC 49175] Length = 301 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 11/231 (4%) Query: 8 KLQENSKRIDTILDDLLLQTASHM-----QTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 K + +S + ++ L A+H+ + RL A+ YA+ GGK+IR L Sbjct: 3 KEKRHSPMVKAVIQQLQQDVANHLTKLIEERPTEARLKEAMLYAVQSGGKRIRPLLTLAV 62 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 S + AL + A+E IH YSLIHDDLP MD+ +RRG+PTVH +DE TAI+AG+ Sbjct: 63 GSAGTSTNKAALDLACALEMIHTYSLIHDDLPGMDDDDMRRGRPTVHKAFDEATAILAGD 122 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-- 179 LLT AFE+ ++ + + + + +LS G+ GM+ GQM DI E + T M Sbjct: 123 ALLTLAFEVAANANLEARQLVEAVKILSSAS--GMSGMISGQMKDIASEEVTITLERMKE 180 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I + KTG L+ A G + ++ KE + + G+ FQ+ +DL D Sbjct: 181 IHREKTGELLLAAVRLGNLFVDDAKM-KEAFVSYATHFGLAFQIQNDLQDV 230 >gi|315038641|ref|YP_004032209.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112] gi|312276774|gb|ADQ59414.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112] Length = 289 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 121/222 (54%), Gaps = 17/222 (7%) Query: 19 ILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFL-VTECASLFNVNHLTALRV 75 ++DD L A H+ + + + +S + Y+++ GGK++R L + +L +R+ Sbjct: 14 VIDDYL---ARHLADEVDSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRI 70 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 71 ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGS 130 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFI--DETQVFMIQKMKTGALMC 190 ++L+ +T +G GM+GGQ LDI +E + D + ++ +KTG L+ Sbjct: 131 NS------AELVKIITQAVGPNGMVGGQYLDIDSTNNESVAGDADFINKMEWLKTGCLIQ 184 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E A+ A A+ E+ +L + + G +Q+ DDL+D E Sbjct: 185 ASVEMAAVYAKATDIEQVKLIDYAKAFGRSYQIYDDLVDVVE 226 >gi|325858516|ref|ZP_08172620.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A] gi|325483013|gb|EGC86002.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A] Length = 324 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 81/225 (36%), Positives = 120/225 (53%), Gaps = 15/225 (6%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D ILD + + + L IRY L LGGK+IR L+ +LF + T L Sbjct: 5 DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134 A+E H Y+L+HDDL MD+ +RRG+ TVH+++D TAI++G+ +L AFE + Sbjct: 65 ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCD 122 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191 L+D +R + +L IG GQ D++ E + E + + ++KT L+ Sbjct: 123 DRHLRDVLRLFTVTAL--EIG-----EGQQYDMEFENRNDVTEAEYIEMIRLKTSVLLAC 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + GA++A A + E L FGE +G+ FQL DD LD D PK Sbjct: 176 AVKLGALLADAPAGDVENLYKFGERIGLAFQLQDDYLDVYGD-PK 219 >gi|62959193|gb|AAY23704.1| farnesyl diphosphate synthase [Exiguobacterium sp. JL-25] Length = 145 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 4/146 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + + Q+++ Sbjct: 1 HDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205 L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTTGAVLAGAKPE 119 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 E + L + +N+G+ FQ+ DD+LD E Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145 >gi|327314324|ref|YP_004329761.1| polyprenyl synthetase [Prevotella denticola F0289] gi|326945935|gb|AEA21820.1| polyprenyl synthetase [Prevotella denticola F0289] Length = 324 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 81/225 (36%), Positives = 120/225 (53%), Gaps = 15/225 (6%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D ILD + + + L IRY L LGGK+IR L+ +LF + T L Sbjct: 5 DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134 A+E H Y+L+HDDL MD+ +RRG+ TVH+++D TAI++G+ +L AFE + Sbjct: 65 ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCD 122 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191 L+D +R + +L IG GQ D++ E + E + + ++KT L+ Sbjct: 123 DRHLRDVLRLFTVTAL--EIG-----EGQQYDMEFENRNDVTEAEYIEMIRLKTSVLLAC 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + GA++A A + E L FGE +G+ FQL DD LD D PK Sbjct: 176 AVKLGALLADAPAGDVENLYKFGERIGLAFQLQDDYLDVYGD-PK 219 >gi|319947470|ref|ZP_08021702.1| geranyltranstransferase [Streptococcus australis ATCC 700641] gi|319746410|gb|EFV98671.1| geranyltranstransferase [Streptococcus australis ATCC 700641] Length = 295 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 6/201 (2%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSM 95 RL+ +I Y++ GGK+IR L+ E F+ L A +V AA+E IH SLIHDDLP+M Sbjct: 26 RLVESILYSVRAGGKRIRPLLLLELLEAFHAPILEAHFQVAAALEMIHTGSLIHDDLPAM 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN RRG+ T H ++ E AI+AG+ L AF ++ + L +I+ QL+ L+ G Sbjct: 86 DNDDYRRGQLTNHKKFGEDLAILAGDSLFLDAFGCVA--EADLPASIQVQLIALLSDASG 143 Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+ GQ+LD++ E T Q+ +I KTG L+ + ++ I+ L Sbjct: 144 TAGMVAGQVLDMEGEGASLTLDQLQVIHANKTGRLLAYPFQAAGILLELEPAVATLLEEI 203 Query: 214 GENLGIIFQLADDLLDCEEDL 234 G +LG+ FQ+ DD+LD D Sbjct: 204 GIHLGLAFQIRDDILDVTADF 224 >gi|288928474|ref|ZP_06422321.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108] gi|288331308|gb|EFC69892.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108] Length = 324 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 110/199 (55%), Gaps = 12/199 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L IRY L +GGK+IR L +LF + + L +E H Y+L+HDDL MDN Sbjct: 27 LYEPIRYVLSIGGKRIRPALALLAYNLFKDDPESILAPACGLETYHNYTLLHDDL--MDN 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPTVH ++D TAI++G+ +L A+++++ D + + ++ L L+ Sbjct: 85 AALRRGKPTVHKRWDANTAILSGDSMLVLAYQLVAQC-----DAAKLKPVMELFTETALE 139 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ D+ E + E + + ++KT L+ A + GA++A A Q + + L FG Sbjct: 140 -IGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACAMKMGALLADAPQRDADLLYKFG 198 Query: 215 ENLGIIFQLADDLLDCEED 233 E +G+ FQL DD LD D Sbjct: 199 EQIGLAFQLQDDFLDVYGD 217 >gi|57641403|ref|YP_183881.1| bifunctional short-chain isoprenyl diphosphate synthase [Thermococcus kodakarensis KOD1] gi|37999032|dbj|BAD00093.1| isoprenyl diphosphate synthase [Thermococcus kodakaraensis] gi|57159727|dbj|BAD85657.1| bifunctional short-chain isoprenyl diphosphate synthase [Thermococcus kodakarensis KOD1] Length = 343 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 85/239 (35%), Positives = 126/239 (52%), Gaps = 20/239 (8%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECAS 63 L ++++E +K +D ++ +L+ + + L A R Y L GGK++R F+V A Sbjct: 7 LFARIKEKAKDVDRVILELVPE-------KEPLELYKAARHYPLAGGKRVRPFVVLRAAE 59 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + AL A++E IH YSL+HDD+ MD +RRG+PTVH + AI+AG+ L Sbjct: 60 AVGGDPEKALYPAASVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKLWGVNMAILAGDLL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + AFE I+ + + R +L T N+ + GQ LDI+ E +E V KM Sbjct: 118 FSKAFEAIAKAEVPAEKKARILDVLVRTSNL----LCEGQALDIEFETKEEVTVEEYLKM 173 Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 KTGAL + E GAI+ + L +G N+GI FQ+ DD+LD EE L K Sbjct: 174 ISGKTGALFQGSAEIGAIVGTEDEEYIGALSKWGMNVGIAFQIWDDVLDLIADEEKLGK 232 >gi|62959235|gb|AAY23725.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-475] Length = 147 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 57/136 (41%), Positives = 84/136 (61%), Gaps = 4/136 (2%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +R GKPTVH YDE TA++AG+ L AFEI++ P T +RS+L+ +L G+ GM Sbjct: 12 LRHGKPTVHKVYDEATAVLAGDALHALAFEILADPGTCSDPFVRSELITTLGTASGMNGM 71 Query: 160 LGGQMLD-IQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GGQM+D + DE D + +Q++KTGAL+ + E GAI+ + LR + Sbjct: 72 AGGQMMDMVADEEGVEYDLHTITRLQQLKTGALLAASVEMGAILGRVPPEGRAHLRAYAR 131 Query: 216 NLGIIFQLADDLLDCE 231 ++G+ FQ+ADD+LD E Sbjct: 132 DIGLAFQIADDILDVE 147 >gi|296109469|ref|YP_003616418.1| Polyprenyl synthetase [Methanocaldococcus infernus ME] gi|295434283|gb|ADG13454.1| Polyprenyl synthetase [Methanocaldococcus infernus ME] Length = 317 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 109/199 (54%), Gaps = 9/199 (4%) Query: 34 QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + N+ +A GGK+IR +L +L N L ++E IH Y+LIHDD+ Sbjct: 22 KDNNLYKAAKHLTFAGGKRIRPYLSILTYNLKKDNINEILPAAVSVELIHNYTLIHDDI- 80 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MDN +RRGKPTVHI Y E AI+AG+ L AFE I + +KD ++ +L + Sbjct: 81 -MDNDELRRGKPTVHIAYGEEMAILAGDLLYAKAFEAIGN----IKDEKKAYKVLKVLSK 135 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + + GQ +D++ E T + + K KTGAL+ + E G IMA ++ E + ++ Sbjct: 136 ACVD-VCEGQAMDMEFESYWPTLEEYLEMIKKKTGALLEASAEIGGIMAEFNEEEMKAIK 194 Query: 212 CFGENLGIIFQLADDLLDC 230 + E +G+ FQ+ DD+LD Sbjct: 195 SYAEKIGLTFQIQDDILDI 213 >gi|312884946|ref|ZP_07744636.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367423|gb|EFP94985.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122] Length = 294 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 90/239 (37%), Positives = 127/239 (53%), Gaps = 16/239 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALLG-GKKIRSFLV 58 MN S Q NS ++ L+ L H D L+ A++Y+LL GK++R FLV Sbjct: 1 MNEVFTSLKQRNSLELEKWLETL----------GHPDLSLVQAMKYSLLSEGKRVRPFLV 50 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 + AAIECIH YSLIHDDLP+MD+ +RRG PT H+Q+DE TAI+ Sbjct: 51 YATGQILGSAVEDLDTAAAAIECIHTYSLIHDDLPAMDDDDLRRGHPTCHMQFDEATAIL 110 Query: 119 AGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDET 175 AG+ L T AF I+S K K + R +++ L + G +GM GQ LD+ E + Sbjct: 111 AGDALQTLAFTILSEGKLSPKAEKNRIKMVQVLANASGARGMCLGQALDLNAEGKSVSLN 170 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEED 233 Q+ I KTG L+ A + GA+ + + L + E +G+ FQ+ DD+LD D Sbjct: 171 QLEAIHVNKTGELIKAAVKLGALSCGSLDDVTATHLDRYAEAIGLAFQVQDDILDLVSD 229 >gi|213026630|ref|ZP_03341077.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 162 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 72/158 (45%), Positives = 99/158 (62%), Gaps = 4/158 (2%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP+ Sbjct: 3 NTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPA 62 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153 MD+ +RRG PT HI++ E AI+AG+ L T AF IIS +P ++ D R ++ L + Sbjct: 63 MDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANA 122 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189 G+ GM GGQ LD+ E I + I + KTGAL+ Sbjct: 123 SGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALI 160 >gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] Length = 326 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 7/203 (3%) Query: 31 MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 + +H + A+RY++L G K+ + LF + L A A+E +H SLI Sbjct: 66 IPVKHPAGIYEAMRYSVLPQGPKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLI 125 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146 HDDLP MD+ +RRGKP+ H Y AI+AG+ L AF+ I S P + +L Sbjct: 126 HDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRL 185 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + + +G GM GQ +D++ + +Q+ K GA+ + G ++ A+++E Sbjct: 186 ITEIARTVGSTGMAAGQYVDLEG---GPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDE 242 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 + LR +G +G+++Q+ DD+ + Sbjct: 243 LQSLRRYGRAVGMLYQVVDDITE 265 >gi|308069598|ref|YP_003871203.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus polymyxa E681] gi|305858877|gb|ADM70665.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase) [Paenibacillus polymyxa E681] Length = 307 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 80/208 (38%), Positives = 120/208 (57%), Gaps = 15/208 (7%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L ++ Y+L GGK++R LV A F + AL V A+E +H YSLIHDDLP+MD+ Sbjct: 42 LRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLPAMDD 101 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNI-- 154 RRGK T H Y E A++AG+ LLT+AF I+ + + + + S +LS+ ++ Sbjct: 102 DDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYSIVQAGR---RHGVSSDALLSIVEDLSE 158 Query: 155 --GLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G +GM+GGQ+ D+ E I+E + I KT L+ F+ +G + A +++ E Sbjct: 159 MSGARGMVGGQVADMSGEQGMTGIEELE--FIHLHKTADLIIFSLLAGGRIGGADKSQLE 216 Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236 LR FG +LG+ FQ+ DD+LD D K Sbjct: 217 ALRRFGRDLGLAFQIQDDILDLIGDESK 244 >gi|223986292|ref|ZP_03636304.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM 12042] gi|223961731|gb|EEF66231.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM 12042] Length = 280 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 9/194 (4%) Query: 42 AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+L+G GK++R L+ A + ++ A+E +H YSLIHDDLP+MDN Sbjct: 24 AMEYSLMGKGKRLRPQLLFAVAEGYGLSAQAGFMAAGALEMMHTYSLIHDDLPAMDNDDY 83 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGM 159 RRG+ T H Q++E TAI+AG+GLLT AF + ++ D +++ +++ L G +GM Sbjct: 84 RRGRKTCHKQFNEATAILAGDGLLTQAFVLAANSS---DDPVKALKIVKELASAGGAEGM 140 Query: 160 LGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 + GQ+ D++ E + Q+ + KTG L GAI+A + R G Sbjct: 141 ILGQIKDLEAENSQAVTLEQLKEVHLYKTGCLFTAPLVMGAILA-GQDAAIPQWRRIGAL 199 Query: 217 LGIIFQLADDLLDC 230 +G+ FQ+ DD+LD Sbjct: 200 MGLAFQIQDDILDV 213 >gi|332519159|ref|ZP_08395626.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4] gi|332045007|gb|EGI81200.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4] Length = 324 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 14/210 (6%) Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L+T S ++ N L I Y L LGGK++R L A +FN ++ AL +IE H Sbjct: 15 LETFSKIREPKN--LYQPIDYILKLGGKRLRPVLTLMTAEVFNYDYKKALDAALSIEVFH 72 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 +SL+HDD+ MD+ +RRG+ TVH ++D TAI++G+ +L A+++ + D+ Sbjct: 73 NFSLVHDDI--MDDAPLRRGEQTVHEKWDVNTAILSGDAMLIMAYQLFENY-----DSKT 125 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMA 200 Q + L L+ + GQ D+ E D+ + KM KT L+ A + GAI+A Sbjct: 126 FQALAKLFSKTALE-VCEGQQYDVDFETRDDVTISEYLKMIEYKTAVLVGAAMKMGAIVA 184 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230 AS +++ + FG LGI FQL DD LD Sbjct: 185 KASNEDQDGIYNFGRLLGIAFQLQDDYLDA 214 >gi|304395256|ref|ZP_07377140.1| Polyprenyl synthetase [Pantoea sp. aB] gi|304357509|gb|EFM21872.1| Polyprenyl synthetase [Pantoea sp. aB] Length = 303 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 105/195 (53%), Gaps = 5/195 (2%) Query: 46 ALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 AL GK+IR L+ A +V L + A+E +H SLI DD+P MD+ +RRG Sbjct: 49 ALAPGKRIRPLLLLLAARDLGCDVTPTGLLDLACAVEMVHAASLILDDMPCMDDAQLRRG 108 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 +PT+H QY E AI+A LL+ AF +++ + L R+ + L+H +G+QG++ GQ Sbjct: 109 RPTIHCQYGEHVAILAAVALLSKAFGVVAMAEG-LTAAARADAVAELSHAVGMQGLVQGQ 167 Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D+ D+ + M KT L C + + +I+A AS +E+L F NLG F Sbjct: 168 FKDLSEGDKPRSADAILMTNHYKTSTLFCASMQMASIVAEASAETREQLHRFSLNLGQAF 227 Query: 222 QLADDLLDCEEDLPK 236 QL DDL D D K Sbjct: 228 QLLDDLTDGMADTGK 242 >gi|146343288|ref|YP_001208336.1| geranylgeranyl pyrophosphate synthetase [Bradyrhizobium sp. ORS278] gi|8650415|gb|AAF78199.1|AF218415_1 geranylgeranyl synthase [Bradyrhizobium sp. ORS278] gi|146196094|emb|CAL80121.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (Farnesyltranstransferase) [Bradyrhizobium sp. ORS278] Length = 316 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/188 (35%), Positives = 96/188 (51%), Gaps = 2/188 (1%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK+ R LV S V L AIE IH SL+ DDLP MD+ RR +P Sbjct: 51 LAGGKRYRGMLVLALGSDLGVPEEQLLSSAVAIETIHAASLVVDDLPCMDDARRRRSQPA 110 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 H+ + E TAI++ L+ A E+++ + QL RS ++ +L+H IG Q + GGQ D Sbjct: 111 THVAFGEATAILSSIALIARAMEVVARDR-QLSPASRSSIVDTLSHAIGPQALCGGQYDD 169 Query: 167 IQDEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + + Q + + + KT AL A A++A R+ G+ LG+ FQ+ D Sbjct: 170 LYPPYYATEQDLIHRYQRKTSALFVAAFRCPALLAEVDPETLLRIARAGQRLGVAFQIFD 229 Query: 226 DLLDCEED 233 DLLD D Sbjct: 230 DLLDLTGD 237 >gi|14521122|ref|NP_126597.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Pyrococcus abyssi GE5] gi|5458339|emb|CAB49828.1| idsA-like multifunctional short chain isoprenyl diphosphate synthase [Pyrococcus abyssi GE5] Length = 346 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/238 (32%), Positives = 125/238 (52%), Gaps = 18/238 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L ++++E +K +D L +L+ + + + +A Y L GGK+IR F+V Sbjct: 11 LFNRIKERAKLVDEKLFELIPEKEPKVLYE------AARHYPLAGGKRIRPFVVLTATEA 64 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N L A+ AIE IH YSL+HDD+ MD RRGKPTVH + AI+AG+ L Sbjct: 65 VGGNALKAIYPAVAIELIHNYSLVHDDIMDMDE--TRRGKPTVHKVWGINMAILAGDLLF 122 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183 + AFE IS + ++ +++++ ++ + GQ LD++ E + + +M Sbjct: 123 SKAFEAIS--RAEISPEKKAKVLETIVK--ASNELCEGQALDLEFENREMVSIEEYMRMI 178 Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 KTGAL + + G I+ ++ E L +G N+G+ FQ+ DD+LD EE L K Sbjct: 179 SGKTGALFDASAKVGGIVGTENEEYIEALSRWGRNVGMAFQIWDDVLDLIADEEKLGK 236 >gi|300770896|ref|ZP_07080773.1| possible geranyltranstransferase [Sphingobacterium spiritivorum ATCC 33861] gi|300762169|gb|EFK58988.1| possible geranyltranstransferase [Sphingobacterium spiritivorum ATCC 33861] Length = 325 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 110/206 (53%), Gaps = 15/206 (7%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDD 91 Q + IRY L L GK++R L A LF + + A AIE H +SLIHDD Sbjct: 22 QEPANMYDPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAALAIEYFHNFSLIHDD 81 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSL 150 + MD +RRG+ TVH ++D+ AI++G+GLL A+E ++ PK L D L Sbjct: 82 I--MDKAPLRRGQLTVHEKWDDSVAILSGDGLLVKAYEQVAKCPKENLLD-------LLT 132 Query: 151 THNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 T N + GQ LD+ E ++ E Q + ++KT L+ A GAI+ AS ++ Sbjct: 133 TFNKVATEVCEGQQLDMDFESLNQVTEAQYLHMIRLKTSVLLGGALRMGAIIGQASVEQQ 192 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 E + FG N+GI FQL DD+LD D Sbjct: 193 ELIYDFGVNVGIAFQLQDDILDVYGD 218 >gi|154491788|ref|ZP_02031414.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC 43184] gi|154088029|gb|EDN87074.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC 43184] Length = 324 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 113/200 (56%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR LV +L+ N TA+ +E H ++L+HDDL MD+ Sbjct: 27 LYDPIEYILSLGGKRIRPALVLMACNLYKENVDTAVNPALGLEVFHNFTLLHDDL--MDD 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156 RR KPTVH ++ TAI++G+ +L A+++I +++ LK+ +L L L Sbjct: 85 ADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGETESESLKE------ILDLFTRTAL 138 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + + GGQ D++ E + E + + ++KT L+ A + GAIM +A + + E L F Sbjct: 139 E-ICGGQQYDMEFESRTDVTEEEYIEMIRLKTAVLLACALKMGAIMGNAPKADAETLYQF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G N+G+ FQL DDLLD D Sbjct: 198 GINIGLAFQLQDDLLDVYGD 217 >gi|303237329|ref|ZP_07323899.1| polyprenyl synthetase [Prevotella disiens FB035-09AN] gi|302482716|gb|EFL45741.1| polyprenyl synthetase [Prevotella disiens FB035-09AN] Length = 324 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 113/202 (55%), Gaps = 18/202 (8%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I+Y L LGGK+IR L+ +L+ N T L A+E H Y+L+HDDL MD Sbjct: 27 LYEPIKYVLDLGGKRIRPILMMLSYNLYKENPKTILSSACALETYHNYTLLHDDL--MDE 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+ TVH +++ AI++G+ +L A+E ++ T+ Q +L+L LQ Sbjct: 85 APLRRGQQTVHTKWNNNQAILSGDSMLVLAYERLAQVDTK-----HLQAVLNLFTETALQ 139 Query: 158 GMLG-GQMLDIQ-----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 +G GQ D++ D +DE + MI ++KT L+ A + GA++A AS + E L Sbjct: 140 --IGEGQQYDMEFEHRNDVTVDEY-IEMI-RLKTSVLLACATKMGALLADASAEDAENLY 195 Query: 212 CFGENLGIIFQLADDLLDCEED 233 FGE +G+ FQL DD LD D Sbjct: 196 KFGEQIGLAFQLQDDYLDVYGD 217 >gi|288818510|ref|YP_003432858.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus TK-6] gi|288787910|dbj|BAI69657.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus TK-6] gi|308752100|gb|ADO45583.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6] Length = 264 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 7/187 (3%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GK+IR + ++ N A+ VG AIE IH YSL+HDDLP++DN RRGK Sbjct: 32 YVFQEGKRIRPLFLCAVSNALGGNLQDAITVGCAIEFIHNYSLVHDDLPALDNDDFRRGK 91 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGG 162 P+ H+ + E AI+AG+ LL AFE +S+ + L + ++ ++ + G QGM+GG Sbjct: 92 PSCHVLFGEDMAILAGDALLNLAFETLSNRENFISLSEKDLIYIIRLVSESSGFQGMVGG 151 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q++D++ + + ++K + FAC G I++ + E L G +G++FQ Sbjct: 152 QVMDVKK--LGDPWSISLKKTASMFSAVFAC--GGIISKKYER-VEYLSKAGTQVGLLFQ 206 Query: 223 LADDLLD 229 L DD D Sbjct: 207 LIDDYKD 213 >gi|262199070|ref|YP_003270279.1| polyprenyl synthetase [Haliangium ochraceum DSM 14365] gi|262082417|gb|ACY18386.1| Polyprenyl synthetase [Haliangium ochraceum DSM 14365] Length = 291 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 87/232 (37%), Positives = 119/232 (51%), Gaps = 16/232 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67 L E ID LD LQ T+ RLL A+RYA LG GK++R L Sbjct: 29 LAEVRPEIDAYLD-ACLQIPGSAATE---RLLEAMRYAALGPGKRLRPALTLAACEAVGG 84 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + +AL AA+E +H Y+L+HDDLP MD+ RRG+PTVH+ YDE A++AG+ LL+ A Sbjct: 85 DRASALPAAAAVELLHTYTLVHDDLPCMDDDDERRGRPTVHVAYDEALAVLAGDALLSEA 144 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF----MIQKM 183 F +++ + D + L G +L GQ+ D+ E +E F + Sbjct: 145 FGVLAKLGPRAGDAV-----AVLARRAGTAELLAGQVHDLVIEAREEAPSFEELEALHAA 199 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL A E GAI AS ++ L +G +G+ FQ ADD D D P Sbjct: 200 KTGALFAAAVELGAIAGGASAEDRANLARYGLAIGVAFQHADDRDDG--DFP 249 >gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media] Length = 180 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 5/174 (2%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 +RY+LL GGK++R L L + A+ A+E IH SLIHDDLP MDN R Sbjct: 1 MRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFR 60 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGML 160 RGKPT H + E TA++AG+ LL++AFE I+ ++ + R+ ++S L I QG++ Sbjct: 61 RGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELGKTISSQGLV 120 Query: 161 GGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GGQ++DI D +D + I KT L+ + +G I+ A+++E R+R Sbjct: 121 GGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVNGGILGGATEDEIARIR 174 >gi|117509|sp|P21684|CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; AltName: Full=Farnesyltranstransferase gi|216682|dbj|BAA14124.1| crtE [Pantoea ananatis] gi|325559605|gb|ADZ30887.1| geranylgeranyl pyrophosphate synthase [MoClo level 2 destination vector pL2-1] gi|325559616|gb|ADZ30895.1| geranylgeranyl pyrophosphate synthase [MoClo end-linker vector pELR-1] Length = 302 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 5/195 (2%) Query: 46 ALLGGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 AL GK+IR L+ A V+H L + A+E +H SLI DD+P MD+ +RRG Sbjct: 48 ALAPGKRIRPMLLLLTARDLGCAVSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRG 107 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 +PT+H Y E AI+A LL+ AF +I+ L +++ + L++ IG+QG++ GQ Sbjct: 108 RPTIHSHYGEHVAILAAVALLSKAFGVIADADG-LTPLAKNRAVSELSNAIGMQGLVQGQ 166 Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D+ D+ + M KT L C + + +I+A+AS ++ L F +LG F Sbjct: 167 FKDLSEGDKPRSAEAILMTNHFKTSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAF 226 Query: 222 QLADDLLDCEEDLPK 236 QL DDL D D K Sbjct: 227 QLLDDLTDGMTDTGK 241 >gi|282859641|ref|ZP_06268743.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010] gi|282587559|gb|EFB92762.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010] Length = 324 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 118/221 (53%), Gaps = 12/221 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 + ILD + A+ + L I+Y L LGGK+IR L+ +L+ N L Sbjct: 5 EEILDKVNQYIANLAYEREPKSLYEPIKYVLSLGGKRIRPVLMLLAYNLYKDNPEDILAQ 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 +E H Y+L+HDDL MDN +RRG TVH +++ AI++G+ +L AFE I+S Sbjct: 65 ACGLETYHNYTLLHDDL--MDNAPLRRGHQTVHEKWNANAAILSGDTMLVLAFERIASG- 121 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 D + + +L+L L+ + GQ LD++ E + E + + ++KT L+ A Sbjct: 122 ----DPAQLKALLNLFTVTALE-IGEGQQLDMEFEHRNDVTEAEYIEMIRLKTSVLLACA 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GAI+A AS+ + L FGE +G+ FQL DD LD D Sbjct: 177 LKMGAILAEASEEDARNLYIFGEKIGLAFQLQDDYLDVYGD 217 >gi|260599331|ref|YP_003211902.1| Geranylgeranyl pyrophosphate synthetase [Cronobacter turicensis z3032] gi|260218508|emb|CBA33693.1| Geranylgeranyl pyrophosphate synthetase [Cronobacter turicensis z3032] Length = 338 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 79/227 (34%), Positives = 121/227 (53%), Gaps = 12/227 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLV--TECASL 64 +LQ + T LD+LL Q D + +A+R AL GK++R L+ T C Sbjct: 51 ELQALHDALQTRLDELL------PPGQERDLVCAAMREGALTPGKRVRPLLLILTACDLG 104 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + + + A+E +H SL+ DD+P MDN +RRGKPT+H QY E AI+A LL Sbjct: 105 CDASQPALMDLACAVEMVHAASLMLDDIPCMDNALLRRGKPTIHRQYGESVAILAAVALL 164 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182 + AF +I+ + L D+ ++Q + L+ +GLQG++ GQ D+ + + + Sbjct: 165 SRAFGVIAQ-ASPLSDSCKTQAVSELSSAVGLQGLVQGQFRDLSEGNQARSAEAILATND 223 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KT L + AI A AS + + +LR F +LG FQL DDL D Sbjct: 224 LKTSVLFDATLQIAAIAAGASASVRHKLREFSRHLGQAFQLLDDLAD 270 >gi|327402903|ref|YP_004343741.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823] gi|327318411|gb|AEA42903.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823] Length = 322 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 112/201 (55%), Gaps = 14/201 (6%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L +RY L LGGK++R L LF +++ +L IE H +SLIHDD+ MD Sbjct: 26 KLYDPLRYFLSLGGKRMRPILTLISGELFQISNEESLSAALTIELFHNFSLIHDDI--MD 83 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPTVHI+++ AI++G+ L ++ ++ + R ++L + + Sbjct: 84 EAPVRRGKPTVHIKWNSSVAILSGDVLFVEGYQQLAKYTDK-----RLPILLKRFNETAI 138 Query: 157 QGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 + + GQ LD+ +D+ +E + MI ++KT L+ A E GAI+ + S+ + L Sbjct: 139 E-VCQGQQLDMDFESRDDVTEEAYIEMI-RLKTSVLLGCALEFGAILGNQSEETRNHLYH 196 Query: 213 FGENLGIIFQLADDLLDCEED 233 FG +LGI FQ+ DD+LD D Sbjct: 197 FGVSLGIAFQIQDDILDLYGD 217 >gi|62959179|gb|AAY23697.1| farnesyl diphosphate synthase [Bacillus sp. JL-39] gi|62959189|gb|AAY23702.1| farnesyl diphosphate synthase [Kocuria sp. JL-51] gi|62959199|gb|AAY23707.1| farnesyl diphosphate synthase [Rhodococcus sp. JL-61] gi|73811207|gb|AAY23722.1| farnesyl diphosphate synthase [Sagittula sp. JL-351] Length = 145 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP MDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + + Q+++ Sbjct: 1 HDDLPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205 L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 E + L + +N+G+ FQ+ DD+LD E Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145 >gi|302024292|ref|ZP_07249503.1| geranyltranstransferase [Streptococcus suis 05HAS68] gi|330833278|ref|YP_004402103.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3] gi|329307501|gb|AEB81917.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3] Length = 289 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 109/207 (52%), Gaps = 6/207 (2%) Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCY 85 A Q Q +RL ++ Y+L GGK+IR L+ F + A +V A +E IH Sbjct: 14 ADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAACVELIHTG 73 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SLIHDDLP+MDN RRG+ T H YDE TAI+AG+ L F ++ + L Sbjct: 74 SLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA--QVDLPAETILA 131 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ L+ G GM+ GQ+LD+ E + T Q+ I KTG L+ F + ++A S Sbjct: 132 LVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQS 191 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230 LR G+ +G+ FQ+ DD+LD Sbjct: 192 DVVINHLRQAGQLIGLAFQVRDDILDV 218 >gi|295425229|ref|ZP_06817932.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664] gi|295065005|gb|EFG55910.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664] Length = 289 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 24/216 (11%) Query: 30 HMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL------TALRVGAAIEC 81 H+ + +D+ +S I Y+++ GGK++R L L +N L +R+ IE Sbjct: 22 HLANEVDDQKISQIMAYSVMAGGKRLRPLLF-----LATLNTLGKEITEDEIRIACGIEL 76 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSLIHDDLP+MDN RRGK T H ++ E +I+AG+ LL + I+ Sbjct: 77 IHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAESILAGDALLPMGIQWIAEGSKS---- 132 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESG 196 ++L+ +T +G GM+GGQ LDI Q D + ++ +KTG L+ + + Sbjct: 133 --AELVQIITQAVGPNGMVGGQYLDIDSTNNQSVAGDAKFINRMEWLKTGCLIEASVKMA 190 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A++ ASQ E+ +L F + G +Q+ DDL+D E Sbjct: 191 AVLVGASQIEEVKLVDFAKVFGRSYQIYDDLVDVVE 226 >gi|223932932|ref|ZP_03624927.1| Polyprenyl synthetase [Streptococcus suis 89/1591] gi|223898378|gb|EEF64744.1| Polyprenyl synthetase [Streptococcus suis 89/1591] Length = 289 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 109/207 (52%), Gaps = 6/207 (2%) Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCY 85 A Q Q +RL ++ Y+L GGK+IR L+ F + A +V A +E IH Sbjct: 14 ADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAACVELIHTG 73 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SLIHDDLP+MDN RRG+ T H YDE TAI+AG+ L F ++ + L Sbjct: 74 SLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA--QVDLPAETILA 131 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ L+ G GM+ GQ+LD+ E + T Q+ I KTG L+ F + ++A S Sbjct: 132 LVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQS 191 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230 LR G+ +G+ FQ+ DD+LD Sbjct: 192 DVVINHLRQAGQLIGLAFQVRDDILDV 218 >gi|153810474|ref|ZP_01963142.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174] gi|149833653|gb|EDM88734.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174] Length = 263 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 112/197 (56%), Gaps = 6/197 (3%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + A+ Y++ GGK++R L+ E LF + A A IE IH +SLIHDDLP++DN Sbjct: 36 MAQAMNYSMCAGGKRLRPILLLETLRLFGGDEKLAEPFMAGIEMIHTHSLIHDDLPAIDN 95 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIG 155 RRG+ T H Y E +++G LL YA+E + + T KD + + + + G Sbjct: 96 DDYRRGRLTTHKVYGEAMGVLSGVTLLNYAYETMFRAFELTDDKDRVIRAVRI-MAEKTG 154 Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GMLGGQ +D++++ +++ + I + KT AL+ + +GA++A A + + + Sbjct: 155 IYGMLGGQSVDVENDGKPLEKDLLDYIYEHKTSALIEASMMAGAVLAGADEEQTSMIEQA 214 Query: 214 GENLGIIFQLADDLLDC 230 ++G+ FQ+ DD+LD Sbjct: 215 ASDIGLAFQIQDDILDV 231 >gi|330505134|ref|YP_004382003.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01] gi|328919420|gb|AEB60251.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01] Length = 295 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/227 (34%), Positives = 127/227 (55%), Gaps = 16/227 (7%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+DT L+ L + + +RL A+RY+++ GGK++R LV + A Sbjct: 12 RVDTALEQLFQAPRTEL-----ERLYQAMRYSVMNGGKRVRPLLVYAACEALEGDIERAD 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE +AI+AG+ L + AF +++ Sbjct: 67 GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDALQSLAFGVLAD 126 Query: 134 PKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 + ++ R Q++ L+ G GM+GGQ +D+ +D+ + ++ + KTGAL+ Sbjct: 127 RRRNPQNTETRLQMVELLSQAAGPAGMVGGQAIDLGSVGLQLDQQALEIMHRHKTGALIE 186 Query: 191 FACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEED 233 + GA+ AS N E R + +G+ FQ+ DD+LD E D Sbjct: 187 ASVALGAL---ASGNTDELARKALLQYSRAIGLAFQVQDDILDVESD 230 >gi|327396572|dbj|BAK13993.1| geranylgeranyl pyrophosphate synthetase CrtE [Pantoea ananatis AJ13355] Length = 302 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 5/195 (2%) Query: 46 ALLGGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 AL GK+IR L+ A V+H L + A+E +H SLI DD+P MD+ +RRG Sbjct: 48 ALAPGKRIRPMLLLLTARDLGCAVSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRG 107 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 +PT+H Y E AI+A LL+ AF +I+ L +++ + L++ IG+QG++ GQ Sbjct: 108 RPTIHSHYGEHVAILAAVALLSKAFGVIADADG-LTPLAKNRAVSELSNAIGMQGLVQGQ 166 Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D+ D+ + M KT L C + + +I+A+AS ++ L F +LG F Sbjct: 167 FKDLSEGDKPRSAEAILMTNHFKTSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAF 226 Query: 222 QLADDLLDCEEDLPK 236 QL DDL D D K Sbjct: 227 QLLDDLTDGMTDTGK 241 >gi|227537499|ref|ZP_03967548.1| possible geranyltranstransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227242636|gb|EEI92651.1| possible geranyltranstransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 325 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 111/206 (53%), Gaps = 15/206 (7%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDD 91 Q + IRY L L GK++R L A LF + + A AIE H +SLIHDD Sbjct: 22 QEPANMYDPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAALAIEYFHNFSLIHDD 81 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSL 150 + MD +RRG+ TVH ++++ AI++G+GLL A+E ++ PK L D L Sbjct: 82 I--MDKAPLRRGQLTVHEKWNDSVAILSGDGLLVKAYEQVAKCPKENLLD-------LLT 132 Query: 151 THNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 T N + GQ LD+ E +D E + + ++KT L+ A GAI+A AS ++ Sbjct: 133 TFNKVATEVCEGQQLDMDFESLDQVTEDEYLHMIRLKTSVLLGGALRMGAIIAQASLEQQ 192 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 E + FG N+GI FQL DD+LD D Sbjct: 193 EFIYDFGVNVGIAFQLQDDILDVYGD 218 >gi|120610694|ref|YP_970372.1| farnesyl-diphosphate synthase [Acidovorax citrulli AAC00-1] gi|120589158|gb|ABM32598.1| farnesyl-diphosphate synthase [Acidovorax citrulli AAC00-1] Length = 306 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/184 (36%), Positives = 109/184 (59%), Gaps = 4/184 (2%) Query: 42 AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+LG GK++R LV A + + ALR ++E IH YSL+HDD+P MDN + Sbjct: 47 AMRYAVLGAGKRLRPLLVLAAAEAVSGHAGAALRAACSVELIHAYSLVHDDMPCMDNDVL 106 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH+Q+ + A++AG+ L AFE++ +P+ + + ++++L L G GM Sbjct: 107 RRGKPTVHVQFGQAQALLAGDALQALAFELL-TPEDDVPEAMQARLCRLLARAAGADGMA 165 Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQ +D+ + E ++ + ++KTGAL+ + GA + + L +G LG Sbjct: 166 GGQAIDLASVGVALSEDELRRMHRLKTGALLQSSVLMGAACGAVAPAAWDALSRYGAALG 225 Query: 219 IIFQ 222 + FQ Sbjct: 226 LAFQ 229 >gi|291619711|ref|YP_003522453.1| CrtE [Pantoea ananatis LMG 20103] gi|291154741|gb|ADD79325.1| CrtE [Pantoea ananatis LMG 20103] Length = 311 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 5/195 (2%) Query: 46 ALLGGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 AL GK+IR L+ A V+H L + A+E +H SLI DD+P MD+ +RRG Sbjct: 57 ALAPGKRIRPMLLLLTARDLGCAVSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRG 116 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 +PT+H Y E AI+A LL+ AF +I+ L +++ + L++ IG+QG++ GQ Sbjct: 117 RPTIHSHYGEHVAILAAVALLSKAFGVIADADG-LTPLAKNRAVSELSNAIGMQGLVQGQ 175 Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D+ D+ + M KT L C + + +I+A+AS ++ L F +LG F Sbjct: 176 FKDLSEGDKPRSAEAILMTNHFKTSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAF 235 Query: 222 QLADDLLDCEEDLPK 236 QL DDL D D K Sbjct: 236 QLLDDLTDGMTDTGK 250 >gi|146319308|ref|YP_001199020.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] gi|146321511|ref|YP_001201222.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33] gi|253752341|ref|YP_003025482.1| geranyltranstransferase [Streptococcus suis SC84] gi|253754167|ref|YP_003027308.1| geranyltranstransferase [Streptococcus suis P1/7] gi|253756101|ref|YP_003029241.1| geranyltranstransferase [Streptococcus suis BM407] gi|145690114|gb|ABP90620.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] gi|145692317|gb|ABP92822.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33] gi|251816630|emb|CAZ52270.1| putative geranyltranstransferase [Streptococcus suis SC84] gi|251818565|emb|CAZ56398.1| putative geranyltranstransferase [Streptococcus suis BM407] gi|251820413|emb|CAR47048.1| putative geranyltranstransferase [Streptococcus suis P1/7] gi|292558940|gb|ADE31941.1| Polyprenyl synthetase [Streptococcus suis GZ1] gi|319758742|gb|ADV70684.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14] Length = 289 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 109/207 (52%), Gaps = 6/207 (2%) Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCY 85 A Q Q +RL ++ Y+L GGK+IR L+ F + A +V A +E IH Sbjct: 14 ADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAACVELIHTG 73 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SLIHDDLP+MDN RRG+ T H YDE TAI+AG+ L F ++ + L Sbjct: 74 SLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA--QVDLPAETILA 131 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ L+ G GM+ GQ+LD+ E + T Q+ I KTG L+ F + ++A S Sbjct: 132 LVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQS 191 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230 LR G+ +G+ FQ+ DD+LD Sbjct: 192 DVVINHLRQAGQLIGLAFQVRDDILDV 218 >gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605] gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605] Length = 296 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 116/204 (56%), Gaps = 7/204 (3%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 + + + L A+RY+LL GGK++R L L AL A+E IH SLIH Sbjct: 26 LGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGEATQALPTAVALEMIHTMSLIH 85 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLM 147 DDLP+MD+ +RRG+PT H Y E AI+AG+ LLT AFE+++ SP + ++ Sbjct: 86 DDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSPGVPAERLLKVVGE 145 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 LSL G G++GGQ++D++ E +D + I KTGAL+ +GA++ A + Sbjct: 146 LSLVA--GAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTGALLSACVITGAMIGGADEA 203 Query: 206 EKERLRCFGENLGIIFQLADDLLD 229 + LR + +G+ FQ+ DD+LD Sbjct: 204 LIKALRTYARGIGLAFQIIDDILD 227 >gi|319953302|ref|YP_004164569.1| geranyltranstransferase [Cellulophaga algicola DSM 14237] gi|319421962|gb|ADV49071.1| Geranyltranstransferase [Cellulophaga algicola DSM 14237] Length = 324 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 116/229 (50%), Gaps = 17/229 (7%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 +RI+ ++ + + + L I Y L LGGK++R L A +F ++ A Sbjct: 2 QRIEDYREEFIAYLEEKSKLKEPINLYEPITYILSLGGKRLRPILTLMTADIFGADYKKA 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L A+E H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +L A+ Sbjct: 62 LDAALAVEVFHNFSLVHDDI--MDDAPLRRGKATVHEKWDINTGILSGDAMLITAY---- 115 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGM--LGGQMLDIQDEFIDETQVFMIQKM---KTGA 187 QL +N ++ SL + GQ D+ E D+ + KM KT Sbjct: 116 ----QLFENYEGEVFRSLAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAV 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ A + GAI+A+AS ++ + FG NLGI FQL DD LD D PK Sbjct: 172 LVGAAMKMGAIIANASTEGQDSIYEFGRNLGIAFQLQDDYLDAFGD-PK 219 >gi|166709970|ref|ZP_02241177.1| farnesyl diphosphate synthase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 332 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 118/233 (50%), Gaps = 14/233 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 +Q ++R++ +L L + + L++A+RYA L GGK+ R+ L +L + Sbjct: 29 MQAGAQRVEQVLARRLCAG-----NEESTELMTAMRYATLQGGKRTRALLCLAAGALADT 83 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +GAAIE +H +L+HDDLP+MDN +RRG PTVH+++ E TAI+ G+ L +A Sbjct: 84 PAHVLDDIGAAIEMMHACTLVHDDLPAMDNDVLRRGLPTVHVKFGEATAILVGDALQAHA 143 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185 F ++ IR L+ L H + G GGQ +D+ + + + + +MK+ Sbjct: 144 FLTLAG--VDASGEIRIALVRELAHAVSADGAAGGQAMDMALVGQSVGLDTIMAMHRMKS 201 Query: 186 GALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEEDL 234 GAL+ + G + A L + G+ Q+ DD+LD D+ Sbjct: 202 GALVRASVRMGTLCALPEGGVHAELAAALDRYSACFGLALQVVDDILDATADV 254 >gi|84489654|ref|YP_447886.1| IdsA [Methanosphaera stadtmanae DSM 3091] gi|84372973|gb|ABC57243.1| IdsA [Methanosphaera stadtmanae DSM 3091] Length = 327 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/231 (34%), Positives = 118/231 (51%), Gaps = 18/231 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 L+ ++ ID ++DD L + + ++ L+ A GGKK R L Sbjct: 7 LKAYAEEIDVVIDDSLSKLEPESLYESSEYLIKA------GGKKFRPALTLLSCQAVGGK 60 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AL+ AAIE H +SLIHDD+ MDN RRGKP VH + E AI+AG+ L +F Sbjct: 61 PEKALKAAAAIELTHTFSLIHDDI--MDNDDTRRGKPAVHKVWGEPLAILAGDSLFAKSF 118 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQ--GMLGGQMLDI--QDEF--IDETQVFMIQK 182 E++S +DNI + ++ + + GQ LD+ +D F + + MI K Sbjct: 119 ELLSQ---SAEDNIAYERVVDALQVLTNSCINICEGQALDMAFEDTFNVTKDEYMNMIYK 175 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTG L+ + GAIM AS NE + LR +G+ +G+ FQ+ DD +D D Sbjct: 176 -KTGDLITASTTIGAIMGGASSNEIQALRTYGKQIGLAFQIQDDYIDLTGD 225 >gi|312864464|ref|ZP_07724695.1| geranyltranstransferase [Streptococcus downei F0415] gi|311099591|gb|EFQ57804.1| geranyltranstransferase [Streptococcus downei F0415] Length = 288 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 84/221 (38%), Positives = 123/221 (55%), Gaps = 12/221 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 ++ID L + + Q+Q + RL+ AI Y++ GGK+IR L+ E F + A Sbjct: 5 EKIDAALKEF------YEQSQVSPRLMEAILYSVHAGGKRIRPLLLLETLEGFGIELTKA 58 Query: 73 -LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 +V AA+E IH SLIHDDLP+MD+ RRG+ T H Q+DE TAI+AG+ L + +I Sbjct: 59 HYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKQFDEATAILAGDSLFLDPYGLI 118 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALM 189 + +T L +I L+ L+ G GM+ GQMLDI+ E T QV+ I KTG L+ Sbjct: 119 A--QTDLHPSIALALIADLSQASGSFGMVAGQMLDIEGEEQTLTLDQVYTIHSHKTGKLL 176 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 F ++ ++A +L G +G FQ+ DD+LD Sbjct: 177 AFPFKAAGLLAQQDSAILAQLEEVGLLVGTAFQVRDDILDV 217 >gi|93007052|ref|YP_581489.1| polyprenyl synthetase [Psychrobacter cryohalolentis K5] gi|92394730|gb|ABE76005.1| farnesyl-diphosphate synthase [Psychrobacter cryohalolentis K5] Length = 360 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 81/221 (36%), Positives = 118/221 (53%), Gaps = 35/221 (15%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNV------------NHLTAL-----------R 74 LL A RY + G GK +R LV AS F+ N L +L R Sbjct: 73 LLDACRYVMTGTGKLVRPLLV---ASAFSSTYSHNDTIADKDNALASLLENDSDYDMCRR 129 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS- 133 A+E +H YSL+HDDLP MD+ +RRG+PT HI ++E TA++AG+ L T AFE++++ Sbjct: 130 AALAVELLHTYSLVHDDLPCMDDDELRRGQPTAHIVFEESTALLAGDVLQTLAFEVLTAD 189 Query: 134 -PKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGAL 188 P D+ I SQL + M+ GQMLD+ E I + + I + KTGAL Sbjct: 190 LPTFAPFDSAIASQLFAIFAPRA--RRMVSGQMLDLNAEATTGISQNDLEAIHRDKTGAL 247 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A G I A A+ ++ L+ +++G+ FQ+ DD+LD Sbjct: 248 IEAAMLMGGICAGATAPQRMALQECAQHIGLAFQVQDDILD 288 >gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10] gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10] Length = 307 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 120/207 (57%), Gaps = 9/207 (4%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + L ++ Y+L+ GGK++R LV + A+ V A+E +H YSLIHDDLP+M Sbjct: 40 ETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDLPAM 99 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154 D+ RRGKPT H + E +AI+AG+ LLT+AF S + K + ++ +LS+ ++ Sbjct: 100 DDDDYRRGKPTNHKVFGEASAILAGDALLTHAF--YSVIQAARKHGVPAERVLSIVEDLA 157 Query: 155 ---GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G +GM+GGQ+ D++ E Q+ I KT L+ F+ +G +A S ++ E Sbjct: 158 VYAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDSQIES 217 Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236 LR FG ++G+ FQ+ DD+LD D K Sbjct: 218 LRTFGHHIGLAFQIQDDILDLVGDESK 244 >gi|148394|gb|AAA21260.1| CrtE [Pantoea agglomerans] Length = 302 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 104/197 (52%), Gaps = 9/197 (4%) Query: 46 ALLGGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 AL GK+IR L+ A V+H L + A+E +H SLI DD+P MD+ I G Sbjct: 48 ALAPGKRIRPMLLLLTARDLGCAVSHEGLLDIACAVEMVHAASLILDDMPCMDDAQIVGG 107 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLG 161 +PTVH QY E AI+A LL+ AF +I+ T L N + + L++ IG+QG++ Sbjct: 108 RPTVHCQYGEHVAILAAVALLSKAFGVIADADGLTALAKN---RAVSELSNAIGMQGLVQ 164 Query: 162 GQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 GQ D+ D+ + M KT L C + + +I+A+AS ++ L F +LG Sbjct: 165 GQFKDLSEGDKRRSAEAILMTNHFKTSTLFCASMQMASIVANASSERRDYLHRFSLDLGQ 224 Query: 220 IFQLADDLLDCEEDLPK 236 FQL DDL D D K Sbjct: 225 AFQLLDDLTDGMADTGK 241 >gi|62959169|gb|AAY23692.1| farnesyl diphosphate synthase [Erythrobacter litoralis] Length = 145 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+P MDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + + Q+++ Sbjct: 1 HDDMPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205 L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A Sbjct: 60 RLGQAVGAEGLVGGQLVDLESEGKTDASVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 E + L + +N+G+ FQ+ DD+LD E Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145 >gi|306833003|ref|ZP_07466135.1| geranyltranstransferase [Streptococcus bovis ATCC 700338] gi|304424902|gb|EFM28036.1| geranyltranstransferase [Streptococcus bovis ATCC 700338] Length = 289 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 119/197 (60%), Gaps = 8/197 (4%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSM 95 L+ AI Y++ GGK+IR + E F + LT V AA+E IH SLIHDDLP+M Sbjct: 25 LIEAILYSVEAGGKRIRPLIFLEILEGFGI-ELTEGHFDVAAALEMIHTGSLIHDDLPAM 83 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ RRG+ T H ++DE TAI+AG+ L F +++ T L +I+ +L+ L+ G Sbjct: 84 DDDDYRRGRLTSHKKFDEATAILAGDSLFLDPFGLVAD--TALSADIKVRLIAELSQASG 141 Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+GGQMLD++ E ++ +++ +I KTG L+ F + I+A+ + N+ + LR Sbjct: 142 TYGMVGGQMLDMKGEERKLNLSELQLIHTNKTGKLLTFPVVAAGIVANLAANDLKSLREA 201 Query: 214 GENLGIIFQLADDLLDC 230 G +G+ FQ+ DD+LD Sbjct: 202 GSLVGLAFQVRDDILDV 218 >gi|289547882|ref|YP_003472870.1| Geranyltranstransferase [Thermocrinis albus DSM 14484] gi|289181499|gb|ADC88743.1| Geranyltranstransferase [Thermocrinis albus DSM 14484] Length = 264 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/188 (38%), Positives = 103/188 (54%), Gaps = 9/188 (4%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y L GGK+IR L+ N A+ VG AIE IH YSLIHDDLP++DN RRG Sbjct: 34 YPLQGGKRIRPLLLCGVCDALGGNVEDAVVVGCAIELIHNYSLIHDDLPALDNDPQRRGL 93 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML---SLTHNIGLQGMLG 161 P+ HI + E A++AG+ LLT AF+++S +Q S L+L ++ G +GM+G Sbjct: 94 PSCHIAFGEDIALLAGDALLTLAFQVLSD-VSQFNQVEPSDLLLIIHEISRRAGSEGMVG 152 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 GQ++DI+ I + + ++K CF S I+A K+ L G G++F Sbjct: 153 GQVMDIRG--IGDRREINLKKTAQLFAACFV--SAGIIAKKKSMLKD-LEKVGIRTGLLF 207 Query: 222 QLADDLLD 229 Q+ DD D Sbjct: 208 QMCDDWKD 215 >gi|62959211|gb|AAY23713.1| farnesyl diphosphate synthase [Synechococcus cf. elongatus CCMP1379] Length = 145 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+P MDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + + Q+++ Sbjct: 1 HDDMPWMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDVPAERLL-QVIV 59 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205 L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 E + L + +N+G+ FQ+ DD+LD E Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145 >gi|254497873|ref|ZP_05110638.1| geranyltranstransferase [Legionella drancourtii LLAP12] gi|254352871|gb|EET11641.1| geranyltranstransferase [Legionella drancourtii LLAP12] Length = 294 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 126/226 (55%), Gaps = 19/226 (8%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 KR + +L+ ++ +++ Q H A+ Y+L GGK+IR LV L +V+ Sbjct: 7 KRHEHVLEQIINESSVPAQQIH-----LAMNYSLFPGGKRIRPILVYLTGHLIDVDPQVL 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + AA+E HCYSLIHDDLP+MD+ +RRGKP+ H +DE TAI+ G+G+ A E++ Sbjct: 62 DVIAAAVELTHCYSLIHDDLPAMDDDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVL- 120 Query: 133 SPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQD---EFIDETQVFMIQKMKT 185 T L + ++++T + G+ GM+ GQ LD+ + I E Q+ I +KT Sbjct: 121 --LTHLSPLVHPVQVIAITQELVKASGISGMVSGQSLDLSELAKSSITEEQLREIHHLKT 178 Query: 186 GALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLD 229 G L+ AC + A S+ K LR + ++G++FQ+ DD LD Sbjct: 179 GRLIS-ACIEMVLAAKDTVSEQTKAALRTYASHIGLVFQMQDDYLD 223 >gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001] gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001] Length = 321 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 80/230 (34%), Positives = 124/230 (53%), Gaps = 14/230 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 P+ L+ R++ LD + + + + L A+RY+LL GGK++R L Sbjct: 30 FPAYLEAARLRVEAALD-------AALGPERPESLREAMRYSLLAGGKRLRPILCLAACE 82 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L A+ A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+ L Sbjct: 83 LAGGESERAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEANAILAGDAL 142 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 LT AFE+++ + + ++ L+ G G++GGQ++D++ E +D + I Sbjct: 143 LTRAFEMVALRSSGVPPERLLAVVGELSLASGAPGLVGGQVVDLECEGKTVDLDTLEYIH 202 Query: 182 KMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ C C GA++A A LR + +G+ FQ+ DD+LD Sbjct: 203 LHKTGALLRACVLC--GALIAGAPDALLTALRTYARGIGLAFQIIDDILD 250 >gi|326574817|gb|EGE24747.1| geranyltranstransferase [Moraxella catarrhalis 101P30B1] Length = 326 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 85/248 (34%), Positives = 123/248 (49%), Gaps = 40/248 (16%) Query: 24 LLQTASHM------QTQHNDRLL--------------SAIRYALL-GGKKIRSFLVTECA 62 +Q A H+ QT+H +LL +A RYA+ GGK +R L Sbjct: 17 FIQNAKHLDQVRQWQTEHLPKLLDLILTQASLPEPLNAACRYAMSNGGKHVRPLLALSTF 76 Query: 63 SLF--------NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 + + N+LT R A+E IH YSLIHDDLP MD+ +RRG+PT HI Sbjct: 77 LMLIQTGDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHI 136 Query: 110 QYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 Y E A++AG+ L + AFE++ K D I +L L+ + M+ GQMLDI Sbjct: 137 VYGEDIALLAGDALQSIAFEVLFECYDKNSADDAIAYKLAKLLS--CRARRMVSGQMLDI 194 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + E + + ++ I + KTGAL+ A GAI A + L+ + +G+ FQ+ D Sbjct: 195 KGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYLKHYARAIGLAFQVQD 254 Query: 226 DLLDCEED 233 D+LD D Sbjct: 255 DVLDITAD 262 >gi|317495197|ref|ZP_07953567.1| polyprenyl synthetase [Gemella moribillum M424] gi|316914619|gb|EFV36095.1| polyprenyl synthetase [Gemella moribillum M424] Length = 286 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 14/210 (6%) Query: 32 QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 +T + L +I Y+L+ GKKIR + + V AIE +H YSL+HD Sbjct: 25 KTDMPELLKKSISYSLVNDGKKIRPLSFLYLLKYYGEDFAEYFDVALAIELVHTYSLVHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP MDN R GK T H + + A++ G+ +LT AFE++S+ + +K +++ +L+ Sbjct: 85 DLPEMDNDDYRWGKLTNHKVFGQDVAVLTGDAMLTLAFEVLSN--SNIKPDLKVKLISQF 142 Query: 151 THNIGLQGMLGGQMLDI-QDEF-IDETQVFMIQKMKTGAL----MCFACESGAIMAHASQ 204 + G GM+ GQ+ DI Q E+ ++ + + +KTG L + FAC+ + S Sbjct: 143 ANYSGAMGMIAGQIYDIKQKEYEVNADYLRRMHSLKTGKLIELPLDFACQIAGKVEELSD 202 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + FG+ LGI +Q+ DD+LD D Sbjct: 203 -----INSFGKELGIAYQIKDDILDYYGDF 227 >gi|62959177|gb|AAY23696.1| farnesyl diphosphate synthase [Bacillus sp. JL-34] gi|62959197|gb|AAY23706.1| farnesyl diphosphate synthase [Bacillus sp. JL-29] gi|73811209|gb|AAY23723.1| farnesyl diphosphate synthase [Citromicrobium bathyomarinum JL354] Length = 145 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+P MDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + + Q+++ Sbjct: 1 HDDMPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205 L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 E + L + +N+G+ FQ+ DD+LD E Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145 >gi|310779233|ref|YP_003967566.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926] gi|309748556|gb|ADO83218.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926] Length = 294 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 110/198 (55%), Gaps = 3/198 (1%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++YA+L GGK++R L+ L + AIE IH YSL+HDDLP++D+ Sbjct: 33 GMKYAVLNGGKRLRPILLLMTLKLLGEREEKGIPAAVAIEMIHSYSLVHDDLPALDDDDY 92 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGK T H +Y E I+ G+ LLT+AF +++S ++ ++ + G+ GM+ Sbjct: 93 RRGKLTTHKKYGEAQGILIGDALLTHAFNVLTSKDQEIDAQKIVDIVRLTSQYAGVNGMI 152 Query: 161 GGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQM+DI+ E ID + I KTG ++ E I+A +KE+L + E +G Sbjct: 153 GGQMVDIESEGKSIDLPVLQYIHTHKTGKMISLPVEVACIIAGIEGEKKEKLIEYSELIG 212 Query: 219 IIFQLADDLLDCEEDLPK 236 + FQ+ DD+LD E D K Sbjct: 213 LAFQIKDDILDIEGDFEK 230 >gi|304382638|ref|ZP_07365132.1| geranyltranstransferase [Prevotella marshii DSM 16973] gi|304336263|gb|EFM02505.1| geranyltranstransferase [Prevotella marshii DSM 16973] Length = 324 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 123/218 (56%), Gaps = 23/218 (10%) Query: 30 HMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 +++ Q+ DR L I+Y L +GGK+IR L+ +L+ + + L AIE H Sbjct: 14 YLEGQNYDRSPKSLYEPIKYVLSMGGKRIRPTLMLLAYNLYKDDPESILSTACAIETYHN 73 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIR 143 Y+L+HDDL MD+ +RRG+ TVH ++ TAI++G+ +L A+E ++ + +LKD Sbjct: 74 YTLLHDDL--MDHADVRRGRATVHKRWGANTAILSGDSMLVLAYERLARCRADKLKD--- 128 Query: 144 SQLMLSLTHNIGLQGMLG-GQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAI 198 +L L L+ +G GQ D+ +D+ +E + MI ++KT L+ A + GAI Sbjct: 129 ---ILDLFTETALE--IGEGQEFDMSFEQRDDVKEEEYIEMI-RLKTSVLLACAMKMGAI 182 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +A A + E L FGE +G+ FQL DD LD D PK Sbjct: 183 LADAPPADAENLYKFGEQIGLAFQLQDDFLDVYGD-PK 219 >gi|288801181|ref|ZP_06406636.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039] gi|288331792|gb|EFC70275.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039] Length = 325 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 16/201 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I+Y+L +GGK+IR L+ L+ + + L V +A+E H Y+L+HDDL MDN Sbjct: 27 LYEPIKYSLSMGGKRIRPMLMLLTYQLYKNDPQSILPVASALETYHNYTLLHDDL--MDN 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTH-NIG 155 +RRG+PTVH +++ TAI++G+ +L +A+++++ D ++ L + ++T IG Sbjct: 85 ALLRRGQPTVHKKWNANTAILSGDSMLVFAYKLLAECNV---DKLKEVLDLFTITALEIG 141 Query: 156 LQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GQ D+ E + E++ + ++KT L+ + + GAI+A A + L Sbjct: 142 -----EGQQYDMDFELRNDVAESEYIEMIRLKTSVLLACSMKIGAILAGAPSEDANNLYR 196 Query: 213 FGENLGIIFQLADDLLDCEED 233 FGE +G+ FQL DD LD D Sbjct: 197 FGELIGLAFQLQDDYLDVYGD 217 >gi|256820671|ref|YP_003141950.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271] gi|256582254|gb|ACU93389.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271] Length = 321 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/196 (35%), Positives = 109/196 (55%), Gaps = 12/196 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I+Y L LGGK+IR L +F ++ AL AIE H +SLIHDD+ MDN Sbjct: 27 LYEPIQYILNLGGKRIRPLLTLIATDIFGKDYCKALNAATAIEVFHNFSLIHDDI--MDN 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPTVH ++D I++G+ +L A++++ ++ I +L+ +L+ L+ Sbjct: 85 ASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDYPSE----IFQELVKTLSET-ALK 139 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ +D+ E + E + +M KT L+ A + G+I++ ++ + + FG Sbjct: 140 -VCEGQQMDMDFEKLQEVSIEAYMQMISYKTSVLIGAALQMGSIISETTKENQMNMYNFG 198 Query: 215 ENLGIIFQLADDLLDC 230 NLGI FQL DD LD Sbjct: 199 LNLGIAFQLQDDYLDT 214 >gi|322385057|ref|ZP_08058707.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100] gi|321270967|gb|EFX53877.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100] Length = 291 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/185 (38%), Positives = 105/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F + A +V AA+E IH SLIHDDLP+MDN RRG+ T Sbjct: 38 GGKRIRPLLLLELLEGFGLELTPAHFQVAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLVA--MVELPSQVKVDLIAELSLAAGSFGMVAGQVLDM 155 Query: 168 QDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E T Q+ I KTG L+ + + I+A SQ+ +LR GE LG+ FQ+ D Sbjct: 156 QGEGRKLTMDQLQTIHANKTGKLLAYPFVAAGIIAQTSQSVLGKLRQAGELLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|260590834|ref|ZP_05856292.1| polyprenyl synthetase [Prevotella veroralis F0319] gi|260537185|gb|EEX19802.1| polyprenyl synthetase [Prevotella veroralis F0319] Length = 324 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 123/222 (55%), Gaps = 13/222 (5%) Query: 21 DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D++L + ++ +R L I+Y L LGGK+IR L+ +LF + + L Sbjct: 5 DEILYKVNDYINNISYNRKPWSLYEPIKYVLSLGGKRIRPTLMLLSYNLFKEDPESILSP 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E H Y+L+HDDL MD+ +RRG+ TVH+++D TAI++G+ +L AF+ ++ Sbjct: 65 ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFDRMAKCS 122 Query: 136 TQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 + +R L L T + + +G + +++ +E + MI ++KT L+ A + Sbjct: 123 DKY---LREVLKLFTTTALEIGEGQQYDMEFETRNDVKEEEYIEMI-RLKTSVLLACAMK 178 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 GA++A A + + E L FGE +G+ FQL DD LD D PK Sbjct: 179 IGALLADAPEEDAESLYKFGEQVGLAFQLQDDYLDVYGD-PK 219 >gi|506378|gb|AAA96328.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 157 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 92/158 (58%), Gaps = 7/158 (4%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E +H SLI DDLP MDN +RRGKPT H + E AI++G LL AFE ++ Sbjct: 1 AVEMMHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVS 60 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFA 192 K +R+ + L +IG +G++ GQ D+ E +++ V + I KTG+L+ + Sbjct: 61 SKKMVRA--VKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEAS 118 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 GA++ ++ E E++R F +G++FQ+ DD+LD Sbjct: 119 AVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDV 156 >gi|62959173|gb|AAY23694.1| farnesyl diphosphate synthase [Roseobacter denitrificans OCh 114] Length = 145 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MDN +RRGKP H Y E AI+AG+ LL+YAFE ++ + + Q+++ Sbjct: 1 HDDLPAMDNDDLRRGKPANHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205 L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 E + L + +N+G+ FQ+ DD+LD E Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145 >gi|289449928|ref|YP_003475509.1| geranyltranstransferase family protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184475|gb|ADC90900.1| geranyltranstransferase family protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 336 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 25/206 (12%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLT--------ALR-VGAAIECIHCYSLIHDD 91 AI YA+L GGK++R L + + L AL+ + A+E IH YSLIHDD Sbjct: 74 AITYAMLAGGKRLRPTLAVLVYEMLSRQTLPTKSETWPDALKYLIRAVESIHIYSLIHDD 133 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MDN +R G+PT+H + E AI+ G+ LL+ A++ + DN+ + ++L+ Sbjct: 134 LPAMDNDSLRHGRPTLHTFFSEGQAILVGDALLSEAWQYATK-----TDNVEAGMILAQ- 187 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFM----IQKMKTGALMCFACESGAIMAHASQNEK 207 M+ GQ D+ F D+ + + K KT AL+ + A + A K Sbjct: 188 ---NALAMVHGQWRDLA--FTDQKVTYQDLCEMVKRKTAALIAAPVLAAATLTEADAPTK 242 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 +L F ENLGI FQ+ DD+LD E + Sbjct: 243 RQLSQFAENLGIAFQIRDDILDVEAE 268 >gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis] Length = 306 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 7/218 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS--LFNVNHLTALRV 75 T++ ++ + + Q+ + + A+RY++L + R+ V A+ LF N L A Sbjct: 20 TLISEINQKLDQAIPIQYPEEIYEAMRYSVLAKRTKRAPPVMCIAACELFGGNRLAAFPT 79 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSP 134 A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG+ L F I+S+ Sbjct: 80 ACALEMVHAASLIHDDLPCMDDAPSRRGQPSNHAVYGVDKAILAGDALFPLGFRHIVSNT 139 Query: 135 KTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + L R +++ + +G GM GQ LD++ +Q+ K G + + Sbjct: 140 PSDLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGSL---NSAEFVQEKKYGEMGECSA 196 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 G ++A A +E +RLR +G +G+++++ DD+L+ + Sbjct: 197 VCGGLLAGAEDDEIQRLRRYGRAVGVLYKVIDDVLEAK 234 >gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107] gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107] Length = 296 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 123/226 (54%), Gaps = 14/226 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + + ++ LDD + + + L A+RY+LL GGK++R L L Sbjct: 11 LGKAKETVEAALDD-------SLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGG 63 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A+ A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+ LLT A Sbjct: 64 DAKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRA 123 Query: 128 FEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183 FE+++ SP ++ LSL G G++GGQ++D++ E +D + I Sbjct: 124 FEMVALRSPGVPADQLLKVVGELSLV--AGAPGLVGGQVVDLESEGKQVDLETLEYIHLH 181 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ +GA++ +A LR + +G+ FQ+ DD+LD Sbjct: 182 KTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILD 227 >gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5] gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5] Length = 304 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 9/207 (4%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + L ++ Y+L+ GGK++R LV + A+ V A+E +H YSLIHDDLP+M Sbjct: 37 ETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDLPAM 96 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154 D+ RRGKPT H + E +AI+AG+ LLT+AF S + K + ++ +LS+ ++ Sbjct: 97 DDDDYRRGKPTNHKVFGEASAILAGDALLTHAF--YSVIQAARKHGVPAERVLSIVEDLA 154 Query: 155 ---GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G +GM+GGQ+ D++ E Q+ I KT L+ F+ +G +A S + E Sbjct: 155 EYAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDAQIES 214 Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236 LR FG ++G+ FQ+ DD+LD D K Sbjct: 215 LRTFGHHIGLAFQIQDDILDLVGDESK 241 >gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group] gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa Japonica Group] gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa Japonica Group] gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group] Length = 376 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 9/222 (4%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71 S R D + D L M +RL ++RY++L GGK++R L L + Sbjct: 89 SARADAVHDAL----DRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGGDAAA 144 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A V A+E IH SLIHDD+P MD+ +RRG+P+ H+ + E TA++AG+ L AFE + Sbjct: 145 ATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHV 204 Query: 132 SS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGA 187 + + + + + L G G+ GQ+ D + E + + + I KT Sbjct: 205 ARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTAR 264 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ A SGAI+ + E ER+R + +G++FQ+ DD+LD Sbjct: 265 LLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLD 306 >gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum] Length = 363 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 70/196 (35%), Positives = 112/196 (57%), Gaps = 4/196 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ A+RY+LL GGK++R L L N A+ A+E IH SLIHDDLP MD Sbjct: 98 KIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMD 157 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKPT H Y E A++AG+ LL +AFE +++ T + + + L ++G Sbjct: 158 DDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEYLATATTGVPPSRILVAVAELAKSVGT 217 Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ+ D+ + + + I KT AL+ + GAI+ + E ++LR F Sbjct: 218 EGLVAGQVADLACTGNPNVGLEMLEFIHIHKTAALLEASVVIGAILGGGADEEVDKLRRF 277 Query: 214 GENLGIIFQLADDLLD 229 + +G++FQ+ DD+LD Sbjct: 278 AQCIGLLFQVVDDILD 293 >gi|254447158|ref|ZP_05060625.1| geranyltranstransferase [gamma proteobacterium HTCC5015] gi|198263297|gb|EDY87575.1| geranyltranstransferase [gamma proteobacterium HTCC5015] Length = 297 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 117/206 (56%), Gaps = 6/206 (2%) Query: 34 QHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q + L SA+ Y A GGK++R L A + AA+E IH YSL+HDDL Sbjct: 27 QAPEALHSAMHYSATGGGKRVRPLLCYATAEALGQSAEQVDGAAAALELIHAYSLVHDDL 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLT 151 P+MD+ +RRG+ T HI +DE TAI+AG+ L T AF+I++S + D R + + L Sbjct: 87 PAMDDDDLRRGQATCHIAFDEATAILAGDALQTLAFDILASDQALTDDPARRLRAVKVLA 146 Query: 152 HNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQN--EK 207 G+ GM+GGQ +DI E T Q+ + +KTGAL+ + + A +A ++N Sbjct: 147 SASGVDGMVGGQAIDIAAEGQQLTLDQLKRMHALKTGALIRASVQISAALAGEAENGDTY 206 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 +RL + E +G+ FQ+ DD+LD D Sbjct: 207 QRLSRYAECIGLAFQIRDDILDVISD 232 >gi|163745285|ref|ZP_02152645.1| geranyltranstransferase [Oceanibulbus indolifex HEL-45] gi|161382103|gb|EDQ06512.1| geranyltranstransferase [Oceanibulbus indolifex HEL-45] Length = 294 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 85/205 (41%), Positives = 117/205 (57%), Gaps = 9/205 (4%) Query: 33 TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + H + A+RYA GGK +R FLV E A L + A AIE +H YSL+HDDL Sbjct: 30 SAHKGPVAEAMRYACTGGKGLRGFLVIESARLHGIAPGMAAPAAGAIEALHAYSLVHDDL 89 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MD+ +RRG+PTVH ++DE TA++AG+ L T FE+I R LM SL Sbjct: 90 PCMDDDDLRRGQPTVHRKWDEATAVLAGDALQTLTFELIG--HLPCSAEARLSLMTSLAG 147 Query: 153 NIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G+ GM+GGQ LDI E ++ +Q KTGAL+ ++ +G MA A + Sbjct: 148 AAGVGGMVGGQALDIAAETAPAPLSLAEITALQAGKTGALIEWSAMAGPRMAGA---DAT 204 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 L + ++LG+ FQ+ADD+LD E D Sbjct: 205 ALGQYAKHLGLAFQIADDILDVEGD 229 >gi|124027425|ref|YP_001012745.1| geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM 5456] gi|123978119|gb|ABM80400.1| Geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM 5456] Length = 336 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 82/242 (33%), Positives = 118/242 (48%), Gaps = 12/242 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M G LP + KR+ +++D + + D L IR GGK++R +V Sbjct: 1 MTGQLPESVVAYLKRVASLVDGYIYAKVKGEPKEVYDAGLHLIR---AGGKRLRPAIVVA 57 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A AL AA+E +H ++LIHDD+ MD RRG PTVH + E AI AG Sbjct: 58 IAEALGEPAERALPFAAAVELVHNFTLIHDDI--MDRDEFRRGVPTVHKVWGEPLAITAG 115 Query: 121 NGLLTYAFEIISSP--KTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 + L AFE ++ K D + R+ +LS + +G M + +DE + + Sbjct: 116 DLLFAKAFETLTDALDKGIPPDRVARATRVLSRASAVIAEGQAMDLMFEEEDEVSIDEYL 175 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234 MI K KTGAL + G ++A E+L FG+NLGI FQ+ DD+L EE+L Sbjct: 176 IMIYK-KTGALFEASAVLGGLVATGDDATLEKLAEFGKNLGIAFQIRDDILGIVGKEEEL 234 Query: 235 PK 236 K Sbjct: 235 GK 236 >gi|117508|sp|P22873|CRTE_ESCVU RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; AltName: Full=Farnesyltranstransferase gi|148400|gb|AAA24819.1| phytoene synthase [Pantoea agglomerans] gi|148408|gb|AAA64977.1| pyrophosphate synthase [Pantoea agglomerans] Length = 307 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 6/203 (2%) Query: 32 QTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS--LFNVNHLTALRVGAAIECIHCYSLI 88 +T D + A+R ++ GK+IR L+ A + + T L + A+E H SL+ Sbjct: 32 ETDSQDIVSLAMREGVMAPGKRIRPLLMLLAARDLRYQGSMPTLLDLACAVELTHTASLM 91 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 DD+P MDN +RRG+PT H ++ E AI+A GLL+ AF +I++ L R+Q + Sbjct: 92 LDDMPCMDNAELRRGQPTTHKKFGESVAILASVGLLSKAFGLIAA-TGDLPGERRAQAVN 150 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNE 206 L+ +G+QG++ GQ D+ D +D T + +KTG L + AI + +S + Sbjct: 151 ELSTAVGVQGLVLGQFRDLNDAALDRTPDAILSTNHLKTGILFSAMLQIVAIASASSPST 210 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 +E L F + G FQL DDL D Sbjct: 211 RETLHAFALDFGQAFQLLDDLRD 233 >gi|62959221|gb|AAY23718.1| farnesyl diphosphate synthase [Synechococcus elongatus CCMP1630] Length = 145 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+P+MDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + + Q+++ Sbjct: 1 HDDMPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205 L +G +G++GGQ++D++ E + V I KTGAL +GA++A A Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALPEVCVTAGAVLAGAKPE 119 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 E + L + +N+G+ FQ+ DD+LD E Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145 >gi|315223793|ref|ZP_07865642.1| polyprenyl synthetase [Capnocytophaga ochracea F0287] gi|314946239|gb|EFS98239.1| polyprenyl synthetase [Capnocytophaga ochracea F0287] Length = 321 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 69/196 (35%), Positives = 110/196 (56%), Gaps = 12/196 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I+Y L LGGK+IR L ++F ++ AL AIE H +SLIHDD+ MDN Sbjct: 27 LYEPIQYILNLGGKRIRPILTLIATNIFGKDYRKALNAATAIEVFHNFSLIHDDI--MDN 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPTVH ++D I++G+ +L A++++ ++ I +L+ +L+ L+ Sbjct: 85 ASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDCPSK----IFQELVKTLSET-ALK 139 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ +D+ E + E + +M KT L+ A + G+I++ ++ + + FG Sbjct: 140 -VCEGQQMDMDFEKLQEVSIEAYMQMISYKTSVLIGAALQMGSIISETTKENQINMYNFG 198 Query: 215 ENLGIIFQLADDLLDC 230 NLGI FQL DD LD Sbjct: 199 LNLGIAFQLQDDYLDT 214 >gi|298717274|ref|YP_003729916.1| geranyltranstransferase [Pantoea vagans C9-1] gi|298361463|gb|ADI78244.1| geranyltranstransferase [Pantoea vagans C9-1] Length = 303 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 5/195 (2%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 AL GK+IR L+ A + A L + A+E +H SLI DD+P MD+ +RRG Sbjct: 49 ALAPGKRIRPLLLLLAARDLGCSATPAGLLDLACAVEMVHAASLILDDMPCMDDAQLRRG 108 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 +PT+H QY E AI+A LL+ AF +++ + L R+ + L+H +G+QG++ GQ Sbjct: 109 RPTIHCQYGEHVAILAAVALLSKAFGVVAMAEG-LTAAARADAVAELSHAVGMQGLVQGQ 167 Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D+ D+ + M KT L C + + +I+A + +E+L F NLG F Sbjct: 168 FKDLSEGDKPRSADAILMTNHYKTSTLFCASMQMASIVAETPKEAREQLHRFSLNLGQAF 227 Query: 222 QLADDLLDCEEDLPK 236 QL DDL D D K Sbjct: 228 QLLDDLTDGMADTGK 242 >gi|255635048|gb|ACU17882.1| unknown [Glycine max] Length = 342 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 7/203 (3%) Query: 31 MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 + Q ++ A+RY++L G K+ + LF + L A A+E +H SLI Sbjct: 69 IPVQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGGSRLAAFPTACALEMVHAASLI 128 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146 HDDLP MD+ RRG+P+ H Y AI+AG+ L F I S P + ++ ++ Sbjct: 129 HDDLPCMDDSPSRRGQPSNHTIYGVDMAILAGDALFPLGFRHIVSQTPSDLVPESHLLRV 188 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + + ++G GM GQ LD++ V IQ+ K G + + G +A A +E Sbjct: 189 IAEIARSVGSTGMAAGQFLDLEG---GPNAVGFIQEKKFGEMGESSAVCGGFLAGAEDDE 245 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 ERLR +G +G+++ + DD+++ Sbjct: 246 IERLRRYGRAVGVLYAVVDDIIE 268 >gi|262368900|ref|ZP_06062229.1| polyprenyl synthetase [Acinetobacter johnsonii SH046] gi|262316578|gb|EEY97616.1| polyprenyl synthetase [Acinetobacter johnsonii SH046] Length = 303 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 112/198 (56%), Gaps = 7/198 (3%) Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L SA+ +A +LGGK++R L A L N N R A+E IHCYSL HDDLP MD Sbjct: 36 LKSAVHHAVMLGGKRVRPALCYATAHLNPNNNAAAVRRAAVAVELIHCYSLAHDDLPCMD 95 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG+PT H+ Y E TA++AG+ L + AFEI+ S + ++L + Sbjct: 96 NDLLRRGQPTCHVAYGEDTALLAGDILQSMAFEILGSRLFDAGPVVDQGIVLKQMQILAT 155 Query: 157 QG--MLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLR 211 M+ GQ+LD+Q E +D+T + I + KTGAL+ A A+ ++ +LR Sbjct: 156 ASSKMVCGQVLDLQAEGKRVDQTALENIHRNKTGALISAAVMMAAVTVFDGCDQAIPKLR 215 Query: 212 CFGENLGIIFQLADDLLD 229 + + +G+ FQ+ DD+LD Sbjct: 216 EYAQAIGLAFQVQDDILD 233 >gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 345 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 31 MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 + Q +++ A+RY+ L G K+ + LF N L A A+E +H SLI Sbjct: 73 IPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGGNRLAAFPTACALEMVHTASLI 132 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQL 146 HDDLP MD+ RRG+P+ H Y AI+AG+ L + I+S T L R ++ Sbjct: 133 HDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHTPTGLVPEPRLLRV 192 Query: 147 MLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 + + +G GM GQ LD++ F++ Q +M + +C G ++A A Sbjct: 193 IAEIARAVGSTGMAAGQFLDLEGGPSFVEFAQEKKYGEMSECSAVC-----GGLLAGAED 247 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231 +E +RLR +G +G+++Q+ DD+L+ + Sbjct: 248 DEIQRLRRYGRAVGVLYQVIDDVLEAK 274 >gi|281421201|ref|ZP_06252200.1| polyprenyl synthetase [Prevotella copri DSM 18205] gi|281404736|gb|EFB35416.1| polyprenyl synthetase [Prevotella copri DSM 18205] Length = 324 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 14/197 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L IRY L +GGK+IR L+ +LF N L A+E H Y+L+HDDL MDN Sbjct: 27 LYEPIRYVLSMGGKRIRPTLMLLGYNLFKDNPEKILMNAVALETYHNYTLLHDDL--MDN 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG TVH ++D TAI++G+ +L A+E ++ D +L L L+ Sbjct: 85 ADLRRGHETVHKKWDANTAILSGDSMLVLAYERMAQC-----DEKHLAKVLKLFTTTALE 139 Query: 158 GMLG-GQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G GQ D++ E + E + + ++KT L+ A + GAI+A AS + E L F Sbjct: 140 --IGEGQQFDMEFENRNDVKEEEYIEMIRLKTSVLLACALKMGAILADASDEDAENLYKF 197 Query: 214 GENLGIIFQLADDLLDC 230 GE +G+ FQL DD LD Sbjct: 198 GEQIGLAFQLQDDYLDV 214 >gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902] gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902] Length = 296 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 120/219 (54%), Gaps = 14/219 (6%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 ++ LDD + + + L A+RY+LL GGK++R L L A+ Sbjct: 18 VEAALDD-------SLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGGEAKHAVP 70 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-- 132 A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+ LLT AFE+++ Sbjct: 71 TAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALR 130 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 SP + ++ LSL G G++GGQ++D++ E +D + I KTGAL+ Sbjct: 131 SPGVPAERLLKVVGELSLV--AGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTGALLS 188 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +GA++ +A LR + +G+ FQ+ DD+LD Sbjct: 189 ACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILD 227 >gi|163735452|ref|ZP_02142885.1| geranylgeranyl pyrophosphate synthetase [Roseobacter litoralis Och 149] gi|161391265|gb|EDQ15601.1| geranylgeranyl pyrophosphate synthetase [Roseobacter litoralis Och 149] Length = 294 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 13/200 (6%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPS 94 RL SA+ YA GG +IR ++T A + LT AA+E IHC SL+HDDLP Sbjct: 27 RLSSALGYATAPGGARIRPTILTSVAMACGDDQPKLTDA-AAAALELIHCASLVHDDLPC 85 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 D+ +RRGKP+VH Y E A++AG+ L+ AFEI++ D + +Q++L L+ Sbjct: 86 FDDADMRRGKPSVHKAYSEPLAVLAGDSLIVLAFEILARESGLAPDRV-AQMILILSQRT 144 Query: 155 GLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G+ G+ GQ + + E + + KTGAL A + GA+ A+ + E Sbjct: 145 GMPGGICAGQGWESEAEI----DLSAYHQAKTGALFIAATQMGAV---AAGQDAEPWFEL 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G +G FQ+ADDL D D Sbjct: 198 GARIGEAFQVADDLRDALYD 217 >gi|312795723|ref|YP_004028645.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Burkholderia rhizoxinica HKI 454] gi|312167498|emb|CBW74501.1| Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) [Burkholderia rhizoxinica HKI 454] Length = 298 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 75/196 (38%), Positives = 111/196 (56%), Gaps = 6/196 (3%) Query: 42 AIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+LGG K++R L A+E IH YSL+HDDLPSMD+ + Sbjct: 40 AMRYAVLGGGKRVRPMLCHAAGQALGAPGQRLDAAACALELIHVYSLVHDDLPSMDDDDM 99 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH+QYDE T ++ G+ L + AF ++S L+ + ++ LM L G GM Sbjct: 100 RRGKPTVHVQYDEATGLLVGDALQSQAFIALAS--DALEAHRQAALMRELACASGSLGMA 157 Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENL 217 GGQ +D+ + TQ+ + +MKTGAL+ A + GA+ S + + L + + + Sbjct: 158 GGQAIDLASVGTRLSRTQLETMHRMKTGALLRAAVKMGALCGDGLSADIEAGLDAYAKAV 217 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LD D Sbjct: 218 GLAFQVVDDILDVTAD 233 >gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group] Length = 314 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 9/222 (4%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71 S R D + D L M +RL ++RY++L GGK++R L L + Sbjct: 27 SARADAVNDAL----DRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGGDAAA 82 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A V A+E IH SLIHDD+P MD+ +RRG+P+ H+ + E TA++AG+ L AFE + Sbjct: 83 ATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHV 142 Query: 132 SS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGA 187 + + + + + L G G+ GQ+ D + E + + + I KT Sbjct: 143 ARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTAR 202 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ A SGAI+ + E ER+R + +G++FQ+ DD+LD Sbjct: 203 LLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLD 244 >gi|294340091|emb|CAZ88459.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Thiomonas sp. 3As] Length = 326 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 109/205 (53%), Gaps = 12/205 (5%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+ YA +GGK++R LV + R A+E +H YSL+HDDLP MD Sbjct: 56 QLHEAMHYAAAMGGKRVRPLLVWAAGECVQADDQALDRAACAVELVHAYSLVHDDLPCMD 115 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PT H+++ E A++AG+ L A+E++ +P+ + ++++L L G Sbjct: 116 DDVLRRGQPTTHVRFGEALALLAGDALQALAYEVL-TPEADIAPALQARLCALLARASGA 174 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGA------LMCFACESGAIMAHASQNEKE 208 GM GGQ LDI + + + KTGA LM AC G AH +Q Sbjct: 175 DGMAGGQTLDILATGGAVSGDDLMHMHSRKTGALLKASVLMGAAC-GGFDTAHPAQTYTA 233 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 L +G+ +G+ FQ+ DD+LD D Sbjct: 234 -LETYGDAVGLAFQVVDDILDVTAD 257 >gi|171778673|ref|ZP_02919769.1| hypothetical protein STRINF_00621 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282630|gb|EDT48054.1| hypothetical protein STRINF_00621 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 289 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 75/196 (38%), Positives = 116/196 (59%), Gaps = 6/196 (3%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L+ +I Y++ GGK+IR + E F ++ A V AA+E IH SLIHDDLP+MD Sbjct: 25 LIESILYSVDAGGKRIRPLIFLELLEGFGISLTDAHYDVAAALEMIHTGSLIHDDLPAMD 84 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + RRG+ T H ++DE TAI+AG+ L F+++++ L +I+ +L+ L+H G Sbjct: 85 DDDYRRGRLTNHKKFDEATAILAGDSLFLDPFDLLAN--AALTADIKIRLIAELSHASGT 142 Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQMLD++ E + +++ +I KTG L+ F + I+A E LR G Sbjct: 143 YGMVGGQMLDMKGEERKLSLSELQLIHSNKTGKLLTFPVVAAGIVAGVEDEELANLRKTG 202 Query: 215 ENLGIIFQLADDLLDC 230 +G+ FQ+ DD+LD Sbjct: 203 SLIGLAFQVRDDILDV 218 >gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102] gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102] Length = 309 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 114/201 (56%), Gaps = 7/201 (3%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + + L A+RY+LL GGK++R L L + A+ A+E IH SLIHDDL Sbjct: 42 ERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDAAQAMPTAVALEMIHTMSLIHDDL 101 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSL 150 P+MD+ +RRG+PT H Y E AI+AG+ LLT AFE+++ SP + ++ LSL Sbjct: 102 PAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSPGVPPERLLKVVGELSL 161 Query: 151 THNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G G++GGQ++D++ E +D + I KTGAL+ +GA++ A Sbjct: 162 VA--GAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTGALLSACVITGAMIGGADDELIA 219 Query: 209 RLRCFGENLGIIFQLADDLLD 229 LR + +G+ FQ+ DD+LD Sbjct: 220 ALRVYARGIGLAFQIIDDILD 240 >gi|288802129|ref|ZP_06407570.1| polyprenyl synthetase [Prevotella melaninogenica D18] gi|302346894|ref|YP_003815192.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845] gi|288335564|gb|EFC73998.1| polyprenyl synthetase [Prevotella melaninogenica D18] gi|302150740|gb|ADK97001.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845] Length = 324 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 115/203 (56%), Gaps = 15/203 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I+Y L LGGK+IR L+ +LF + T L A+E H Y+L+HDDL MD+ Sbjct: 27 LYEPIKYVLSLGGKRIRPTLMLLSYNLFKDDPETILSPACALETYHNYTLLHDDL--MDD 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156 +RRG+ TVH+++D TAI++G+ +L AFE ++ ++ L + +R + +L IG Sbjct: 85 APLRRGQQTVHVRWDANTAILSGDSMLVLAFERMAQCDSRHLSEVLRLFTVTAL--EIG- 141 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GQ D++ E + E + + ++KT L+ A + GAI+A A + E L F Sbjct: 142 ----EGQQYDMEFENRNDVKEEEYIEMIRLKTSVLLACAMKIGAILADAPAEDVENLYKF 197 Query: 214 GENLGIIFQLADDLLDCEEDLPK 236 GE +G+ FQL DD LD D PK Sbjct: 198 GEQIGLAFQLQDDYLDVYGD-PK 219 >gi|251777602|ref|ZP_04820522.1| putative geranyltranstransferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243081917|gb|EES47807.1| putative geranyltranstransferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 289 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 123/212 (58%), Gaps = 9/212 (4%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + +N + + Y++ +GGK+IR L+ SL+ N + + AAIE IH YSLIHD Sbjct: 21 RNSYNKTVYESAGYSVNIGGKRIRPTLLILTYSLYKDNIEKIMPMAAAIEMIHTYSLIHD 80 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN-IRSQLMLS 149 DLP MD+ +RRGKPT H + E A++AG+ LL A ++ +L ++ +R+ +S Sbjct: 81 DLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKSSLELGESALRASYEIS 140 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 G +GM+GGQ++D+ E I + ++ + + KTG L+ + +G I+A+ + Sbjct: 141 --KAAGPEGMIGGQIVDVLSEVREISKEELEYMHEKKTGELIRVSIVAGGILANVPSGDI 198 Query: 208 ERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 E L +G+ LG+ FQ+ DD+LD EE L K Sbjct: 199 EALNEYGKKLGLAFQIKDDILDVIGTEETLGK 230 >gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii] Length = 334 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 114/219 (52%), Gaps = 7/219 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75 T++ D+ + + ++ +++ A+RY++L G K+ + LF N L A Sbjct: 49 TLIVDINQKLDEAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGGNRLAAFPT 108 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133 A+E +H SLIHDDLP MD+ RRG P H + AI+AG+ L F+ I S Sbjct: 109 ACALEMVHAASLIHDDLPCMDDDTTRRGLPANHTVFGVDMAILAGDALFPLGFQHIVSHT 168 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 P + ++ +++ + +G GM GQ LD++ V +Q+ K G + + Sbjct: 169 PSDLVPEDRILRVITEIARAVGSTGMAAGQFLDLEG---GPNAVDFVQEKKYGEMGECSA 225 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 GA++A AS E + +R +G +G+++++ DD+L+ ++ Sbjct: 226 VCGALLAGASDEEIQHMRKYGRAVGVLYRVVDDILEAKK 264 >gi|303243472|ref|ZP_07329814.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1] gi|302486033|gb|EFL48955.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1] Length = 319 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 112/203 (55%), Gaps = 15/203 (7%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 + ++ L +A ++ L GGK+IR +L T L N L A+E IH Y+LIHDD Sbjct: 20 VEKDNTLYNASKHLLFAGGKRIRPYLATLTYMLKKDNLDEILPPAVAVELIHNYTLIHDD 79 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + MDN RRG+ TVH++Y E AI+AG+ L AFE IS+ +KD ++ +L Sbjct: 80 I--MDNDDERRGRTTVHVEYGEPIAILAGDLLYAKAFEAISN----IKDPKKAHEVLKAL 133 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFACESGAIMAHASQNE 206 ++ + GQ +D+ EF D ++ F + KTGAL+ E GAIMA + E Sbjct: 134 SKACVE-VCEGQAMDM--EFEDRDKISLDDYFEMISKKTGALIIAPIEIGAIMAECTDEE 190 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 + L + + +G+ FQ+ DD+LD Sbjct: 191 RNALYEYAKRIGMTFQIQDDVLD 213 >gi|188590181|ref|YP_001921548.1| geranyltranstransferase [Clostridium botulinum E3 str. Alaska E43] gi|188500462|gb|ACD53598.1| putative geranyltranstransferase [Clostridium botulinum E3 str. Alaska E43] Length = 289 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + +N + + Y++ +GGK+IR L+ SL+ N + + AAIE IH YSLIHD Sbjct: 21 RNSYNKTVYESAGYSVNIGGKRIRPTLLILTYSLYKDNIEKIMPIAAAIEMIHTYSLIHD 80 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS- 149 DLP MD+ +RRGKPT H + E A++AG+ LL A ++ +L + S L S Sbjct: 81 DLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKSSLELGE---SALKASY 137 Query: 150 -LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 ++ G +GM+GGQ++D+ E I + ++ + + KTG L+ + +G I+A+ + Sbjct: 138 EISKAAGPEGMIGGQVVDVLSEVREISKEELEYMHEKKTGELIRVSIVAGGILANVPSGD 197 Query: 207 KERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 E L +G+ LG+ FQ+ DD+LD EE L K Sbjct: 198 IEALNEYGKKLGLAFQIKDDILDVIGTEETLGK 230 >gi|156973484|ref|YP_001444391.1| geranyltranstransferase [Vibrio harveyi ATCC BAA-1116] gi|156525078|gb|ABU70164.1| hypothetical protein VIBHAR_01174 [Vibrio harveyi ATCC BAA-1116] Length = 294 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 12/211 (5%) Query: 32 QTQHNDR-LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 Q H ++ L+ A++Y LL GGK++R FLV + +AIECIH YSLIH Sbjct: 22 QLPHQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAIECIHAYSLIH 81 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQ 145 DDLP+MD+ +RRG+PT HI++DE TAI+ G+ L T AF I++ +P +N R + Sbjct: 82 DDLPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAFTILAEGALNPNA---ENQRIK 138 Query: 146 LMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 ++ +L G GM GQ LD+ ++ + + I + KTGAL+ A + GA+ A Sbjct: 139 MVQALAQASGAGGMCLGQALDLGAENRRVSLADLEEIHRNKTGALINCAVKLGALAAGEK 198 Query: 204 QNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 E L + + +G+ FQ+ DD+LD D Sbjct: 199 GLEVLPHLERYSKAIGLAFQVQDDILDIISD 229 >gi|297599729|ref|NP_001047684.2| Os02g0668100 [Oryza sativa Japonica Group] gi|255671156|dbj|BAF09598.2| Os02g0668100 [Oryza sativa Japonica Group] Length = 349 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 13/222 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70 +++ D+ + + M + +R+ SA+RYA+L G K+ L L Sbjct: 55 SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 114 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 AL A+E +H SL+HDDLP D RRG+P+ H Y A++AG+ L A+ Sbjct: 115 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 174 Query: 131 ISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKT 185 + + T D + ++L L +G GM GQ LD+ + E +V + K Sbjct: 175 VIA-HTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKF 233 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 G + + GA++ A +E+ LR +G +G+++QL DD+ Sbjct: 234 GEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 275 >gi|255691323|ref|ZP_05414998.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565] gi|260622965|gb|EEX45836.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565] Length = 324 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 112/202 (55%), Gaps = 18/202 (8%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + Y L LGGK+IR L+ +L+ + + AAIE H ++L+HDDL MD Sbjct: 27 LYEPVEYTLSLGGKRIRPVLMLMAYNLYREDVASIYEPAAAIEVYHNHTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKD--NIRSQLMLSLTHNI 154 +RRGKPTVH +++ TA+++G+ +L AF +++ P LK+ ++ S ML + Sbjct: 85 SDMRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTACPAEHLKEVMDLFSLTMLEICE-- 142 Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LD++ E + E + + ++KT L+ + + GAI+A A+ + E L Sbjct: 143 -------GQQLDMEFESRGDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLY 195 Query: 212 CFGENLGIIFQLADDLLDCEED 233 FG +G+ FQL DDLLD D Sbjct: 196 KFGMQIGVAFQLQDDLLDVYGD 217 >gi|125540612|gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indica Group] Length = 344 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 13/222 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70 +++ D+ + + M + +R+ SA+RYA+L G K+ L L Sbjct: 50 SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 109 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 AL A+E +H SL+HDDLP D RRG+P+ H Y A++AG+ L A+ Sbjct: 110 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 169 Query: 131 ISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKT 185 + + T D + ++L L +G GM GQ LD+ + E +V + K Sbjct: 170 VIA-HTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKF 228 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 G + + GA++ A +E+ LR +G +G+++QL DD+ Sbjct: 229 GEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 270 >gi|62959213|gb|AAY23714.1| farnesyl diphosphate synthase [Synechococcus sp. WH 5701] Length = 145 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP MDN +R+GKPT H Y E AI+AG+ LL+YAFE ++ + + Q+++ Sbjct: 1 HDDLPGMDNDDLRQGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205 L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 E + L + +N+G+ FQ+ DD+LD E Sbjct: 120 EVQLLSRYAQNIGLAFQVVDDILDVE 145 >gi|50252136|dbj|BAD28132.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica Group] gi|215713481|dbj|BAG94618.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740753|dbj|BAG97409.1| unnamed protein product [Oryza sativa Japonica Group] gi|215767016|dbj|BAG99244.1| unnamed protein product [Oryza sativa Japonica Group] Length = 342 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 13/222 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70 +++ D+ + + M + +R+ SA+RYA+L G K+ L L Sbjct: 48 SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 107 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 AL A+E +H SL+HDDLP D RRG+P+ H Y A++AG+ L A+ Sbjct: 108 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 167 Query: 131 ISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKT 185 + + T D + ++L L +G GM GQ LD+ + E +V + K Sbjct: 168 VIA-HTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKF 226 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 G + + GA++ A +E+ LR +G +G+++QL DD+ Sbjct: 227 GEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 268 >gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp. lyrata] gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp. lyrata] Length = 310 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 7/203 (3%) Query: 31 MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 + +H + A+RY++L G K+ + LF + L A A+E +H SLI Sbjct: 55 IPVKHPAGIYEAMRYSVLAQGAKRASPVMCVAACELFGGDRLAAFPTACALEMVHAASLI 114 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146 HDDLP MD+ +RRGKP+ H Y A++AG+ L F I S P + ++ Sbjct: 115 HDDLPCMDDDPVRRGKPSNHTVYGSGIALLAGDALFPLGFHHIVSHTPPELVPRATILRV 174 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + + +G GM GQ +D++ + +Q+ K GA+ + G ++ A+++E Sbjct: 175 IAEIARTVGSTGMAAGQYVDLEGGPFPPS---FVQEKKFGAMGECSAVCGGLLGGATEDE 231 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 E LR +G +G+++Q DD+ + Sbjct: 232 LESLRRYGRAVGMLYQAVDDITE 254 >gi|329295597|ref|ZP_08252933.1| Polyprenyl synthetase [Plautia stali symbiont] Length = 259 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L + A+E +H SLI DD+PSMDN +RRG+P +H +Y E AI+A LL+ AFE+I+ Sbjct: 34 LDLACAVEMVHAASLILDDIPSMDNARMRRGRPAIHCEYGENVAILAAVALLSRAFEVIA 93 Query: 133 -SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALM 189 +P L +++ + L+ +GLQG++ GQ D+ D + + + ++KT L Sbjct: 94 LAPG--LPATHKAEAIAELSSAVGLQGLVQGQFQDLHDGAHSRSPEAITLTNELKTSVLF 151 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + AI A AS ++RL F ++LG FQL DDL D Sbjct: 152 RATLQMAAIAADASVQVRQRLSYFAQDLGQAFQLLDDLAD 191 >gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya] Length = 214 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 58/154 (37%), Positives = 91/154 (59%), Gaps = 3/154 (1%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SLIHDDLP MDN +RRGKPT H + E A++AG+ LL+++FE ++ + Sbjct: 1 EMMHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLAVATVGVD 60 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESG 196 + + + L +IG +G++ GQ++DI E + + + I KT AL+ A G Sbjct: 61 PSRIVRAIKELAKSIGTEGLVAGQVVDICSEGMTDVGLEHLEFIHVHKTAALLEAAVVLG 120 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 AI+ + E E+LR F +G++FQ+ DD+LD Sbjct: 121 AILGGGTDEEIEKLRKFARYIGLLFQVVDDILDV 154 >gi|15553717|gb|AAL01998.1|AF408847_1 geranylgeranyl diphosphate synthase [Xanthobacter autotrophicus Py2] Length = 359 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 110/217 (50%), Gaps = 8/217 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR 74 ID L L+ ASH H +A+R+ LL GK++R L A N + L Sbjct: 75 IDRRLGLLVPPAASHPAVLH-----AAMRHILLSPGKRLRPLLTLAAAIQLNASEHAVLD 129 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 G A+E IH SLI DDLP MD+ +RR +PT H+QY E A++A GLL+ AF + ++ Sbjct: 130 FGCALEMIHASSLIVDDLPCMDDAAMRRAQPTTHVQYGEDVAVLASIGLLSRAFGVAAA- 188 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-TQVFMIQKMKTGALMCFAC 193 + + R + + L+ +G G+ GGQ D++ + + + KTG L A Sbjct: 189 APGVSERARLEAVAILSMAVGSLGLCGGQYDDLRPSPGRSLSATEDVNRRKTGVLFSAAV 248 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 E +A A + + L+ ++G +Q+ DD+LD Sbjct: 249 EIAGHVAAADETQMGHLKALAGHVGRAYQILDDILDA 285 >gi|154248054|ref|YP_001419012.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2] gi|154162139|gb|ABS69355.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2] Length = 310 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 112/219 (51%), Gaps = 12/219 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR 74 ID L L+ ASH H +A+R+ LL GK++R L A N + L Sbjct: 26 IDRRLGLLVPPAASHPAVLH-----AAMRHILLSPGKRLRPLLTLAAAIQLNASEHAVLD 80 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 G A+E IH SLI DDLP MD+ +RR +PT H+QY E A++A GLL+ AF + ++ Sbjct: 81 FGCALEMIHASSLIVDDLPCMDDAAMRRAQPTTHVQYGEDVAVLASIGLLSRAFGVAAA- 139 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCF 191 + + R + + L+ +G G+ GGQ D++ + T+ + + KTG L Sbjct: 140 APGVSERARLEAVAILSMAVGSLGLCGGQYDDLRPSPGRSLSATE--DVNRRKTGVLFSA 197 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A E +A A + + L+ ++G +Q+ DD+LD Sbjct: 198 AVEIAGHVAAADETQMGHLKALAGHVGRAYQILDDILDA 236 >gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC 7421] gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC 7421] Length = 295 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 10/228 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L++ +++ LD L Q Q+ D+L A+RY+LL GGK++R L Sbjct: 6 LDAYLRQCRSQVEAALDRYLPQ-------QYPDKLYEAMRYSLLAGGKRLRPILCLTSCR 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A+ A+E +H SLIHDDLP+MD+ RRGK T H Y E AI+AG+ L Sbjct: 59 MSGGSADLAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDMAILAGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 L YAF++I+ + +++ L G++GGQ++D++ E I + I Sbjct: 119 LAYAFQLIAEKTVGAQPERVVEVLGRLGKAASGAGLVGGQVVDLESEGRTITLETLEYIH 178 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ + SGAI+A A ERL + +G+ FQ+ DDLLD Sbjct: 179 THKTGALLEVSVISGAILAGADGGVVERLTRYSRCIGLAFQIRDDLLD 226 >gi|325661672|ref|ZP_08150295.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471925|gb|EGC75140.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium 4_1_37FAA] Length = 296 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 82/224 (36%), Positives = 126/224 (56%), Gaps = 5/224 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 + KR T + +L+ +Q ++ A+ Y+L+ GGK++R L+ E +F Sbjct: 5 DEKRKKTEEIEQILKAYLPVQEGKQQVIMEAMEYSLMAGGKRLRPMLLWETFQMFGGAAK 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T AAIE IH YSL+HDDLP+MD+ RRG+ T HI Y E I+AG+ LL YAFE Sbjct: 65 TVRPFMAAIEMIHTYSLVHDDLPAMDDDDYRRGRKTTHIVYGEDMGILAGDALLNYAFET 124 Query: 131 I-SSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTG 186 ++ + ++ IR + + L G+ GM+GGQ++D+ + I E + I ++KTG Sbjct: 125 ACTAFEEAPEEAIRIGKALQVLAKKAGIYGMIGGQVVDVSASGKNITEDILSFIYELKTG 184 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 AL+ A GAI+A A + E + + +GI FQ+ DD+LD Sbjct: 185 ALLESAMMIGAILAGAEEEEVAVIEQVAKKIGIAFQIQDDILDV 228 >gi|153808868|ref|ZP_01961536.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185] gi|149128694|gb|EDM19912.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185] Length = 324 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 14/206 (6%) Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T+ L I Y L LGGK+IR L+ +L+ + + AAIE H ++L+HDD Sbjct: 21 TREPKGLYEPIEYILSLGGKRIRPVLMLMAYNLYREDVASIYDPAAAIEVYHNHTLLHDD 80 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSL 150 L MD +RRGKPTVH +++ TAI++G+ +L AF ++++ P LK+ + + +L Sbjct: 81 L--MDRSDMRRGKPTVHKVWNDNTAILSGDAMLILAFRLMTAAPSEHLKEVMELFGLTTL 138 Query: 151 THNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 + GQ LD++ E D E + + ++KT L+ + + GAI+A A+ + Sbjct: 139 E-------ICEGQQLDMEFESRDNVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDA 191 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 E L FG +G+ FQL DDLLD D Sbjct: 192 ENLYNFGMQIGVAFQLQDDLLDVYGD 217 >gi|62959207|gb|AAY23711.1| farnesyl diphosphate synthase [Roseobacter sp. JL-135] Length = 144 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 84/136 (61%), Gaps = 7/136 (5%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG PTVH ++DE TA++ G+ L T FE++ SP+ +R+ L LSL +G +GM Sbjct: 12 LRRGLPTVHKKWDEGTAVLVGDALQTLGFELVLSPECHPDPAVRTDLALSLAKAVGAKGM 71 Query: 160 LGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + GQ LDI E D+ ++ +Q KTGAL+ ++ E+GA +A Q + L + + Sbjct: 72 VLGQALDIAAETADQPLTLDEIIALQNGKTGALIRWSAEAGARLA---QADAAPLTAYAD 128 Query: 216 NLGIIFQLADDLLDCE 231 LG+ FQ+ADD+LD E Sbjct: 129 ALGLAFQIADDILDVE 144 >gi|71278749|ref|YP_267833.1| geranyltranstransferase [Colwellia psychrerythraea 34H] gi|71144489|gb|AAZ24962.1| geranyltranstransferase [Colwellia psychrerythraea 34H] Length = 300 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 82/222 (36%), Positives = 131/222 (59%), Gaps = 24/222 (10%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFL--VTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 T ++ +L+ A+RY LL GGK++R +L +T A ++N + A V A+ECIH YSL+H Sbjct: 26 TINDPKLIEAMRYGLLIGGKRMRPYLAYITGEAVSADLNDIDA--VAGALECIHAYSLLH 83 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN-----IRS 144 DDLP+MD+ +RRGKPT H +DE TAI+AG+ L T AF+I+++ + + I+ Sbjct: 84 DDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFDILANHTFSMNQSTAGMPIQV 143 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202 +L+ L G QGM GGQ LD+ + I ++ ++ +KTGAL+ E+ +M Sbjct: 144 KLIQQLVKASGYQGMCGGQALDLAATGKNISLGELEVLHSLKTGALL----EASVLMPAM 199 Query: 203 SQNEKER-----LRCFGENLGIIFQLADDLLD---CEEDLPK 236 + R L + + +G+ +Q+ DD++D EE+L K Sbjct: 200 CSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGK 241 >gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera] Length = 341 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 7/215 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75 T++ ++ + + ++ ++ A+RY++L GGK+ + LF + L A Sbjct: 56 TLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPT 115 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133 A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG+ L F I S Sbjct: 116 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHT 175 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 P + + +++ + ++G GM GQ LD++ V +Q+ K G + + Sbjct: 176 PSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGA---PNSVDFVQRKKFGEMAECSA 232 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 G + A+ ++ RLR +G +G+++Q+ DD+L Sbjct: 233 VCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDML 267 >gi|300726785|ref|ZP_07060215.1| polyprenyl synthetase [Prevotella bryantii B14] gi|299775898|gb|EFI72478.1| polyprenyl synthetase [Prevotella bryantii B14] Length = 324 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 113/203 (55%), Gaps = 15/203 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L IRY L +GGK+IR L+ +LF + + L A+E H Y+L+HDDL MD Sbjct: 27 LYEPIRYVLSIGGKRIRPTLMLLAYNLFKEDPESILMSACALETYHNYTLLHDDL--MDQ 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGK TVH +++ TAI++G+ +L A++ + + K + + + +L IG Sbjct: 85 ADLRRGKETVHKKWNANTAILSGDSMLVLAYQRMLNCKPEYQGKVL-KLFTETALEIG-- 141 Query: 158 GMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GQ D++ E ++E + MI ++KT L+ A + GAI+A AS + + L F Sbjct: 142 ---EGQQYDMEFETRMDVVEEEYIEMI-RLKTSVLLACAMKIGAILADASDEDADNLYKF 197 Query: 214 GENLGIIFQLADDLLDCEEDLPK 236 GE +G+ FQL DD LD D PK Sbjct: 198 GEQIGLAFQLQDDYLDVYGD-PK 219 >gi|61653256|gb|AAX48209.1| geranylgeranyl pyrophosphate synthase [uncultured proteobacterium DelRiverFos06H03] Length = 304 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 13/205 (6%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIH 89 T RL++A+R+A+ GG +IR L A+ N HLT A+E +HC SL+H Sbjct: 21 TGAPPRLVAAMRHAVFSGGARIRPQLCMAVATACGDNAPHLTD-AAAVALELMHCASLVH 79 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+P+ DN RRG PTVH + E A++AG+GL+ A+ ++ Q D + + LM + Sbjct: 80 DDMPAFDNADTRRGLPTVHKAFSEPLALLAGDGLIVMAYRVLLQAGVQQPDRLVA-LMDN 138 Query: 150 LTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 LT +GL G++ GQ + + + Q+ KTGAL A +GA+ + E Sbjct: 139 LTAGVGLPHGIVAGQAWECE----TSADLGQYQRAKTGALFVSATCAGAL---SCGVAPE 191 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 G+ LG +Q+ADD+ D D Sbjct: 192 PWAFLGQYLGEAYQVADDIRDVIAD 216 >gi|212693605|ref|ZP_03301733.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855] gi|237708764|ref|ZP_04539245.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237724205|ref|ZP_04554686.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265755969|ref|ZP_06090436.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212663858|gb|EEB24432.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855] gi|229437393|gb|EEO47470.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229457190|gb|EEO62911.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263234047|gb|EEZ19648.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 325 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 20/213 (9%) Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L T +M+ L + I Y L LGGK+IR L+ L+ N L A IE H Sbjct: 16 LATMPYMREPKG--LYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILSQAAGIETYH 73 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKD-- 140 Y+L+HDDL MD +RR KPTVH +DE TAI++G+ +L A+ ++++ P + LK Sbjct: 74 NYTLLHDDL--MDRADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCPDSYLKQVM 131 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGA 197 +I SQ L + GQ D++ E + ++ + ++KT L+ A + GA Sbjct: 132 DIFSQTALEICE---------GQQWDMEFETRSDVTVSEYIEMIRLKTSVLLSAALKIGA 182 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++ AS+ + ++L FG +G+ FQL DD LD Sbjct: 183 VLGDASEEDAQKLYDFGIKMGLAFQLQDDFLDV 215 >gi|94311552|ref|YP_584762.1| farnesyl-diphosphate synthase [Cupriavidus metallidurans CH34] gi|93355404|gb|ABF09493.1| geranyltranstransferase [Cupriavidus metallidurans CH34] Length = 294 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 119/230 (51%), Gaps = 9/230 (3%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65 + ++ R + L+ L T + T H A+RYA+LGG K++R LV + Sbjct: 6 TWMRAQGARTEAALEAALPSTDTIPYTLHE-----AMRYAVLGGGKRVRPLLVHAAGEVV 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+ L + Sbjct: 61 GATPEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQS 120 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKM 183 AF I+ + L R +++ L G GM GGQ +D+Q+ + + + + +M Sbjct: 121 QAF-IVLAQTPALAAEARLKVVAELAVASGSIGMCGGQAIDLQNVGKAMTREALEGMHRM 179 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ + GA+ + Q L + +G+ FQ+ DD+LD D Sbjct: 180 KTGALLRASVRMGALCGNIDQAGLVALDRYAAAVGLAFQVVDDILDVTAD 229 >gi|62959167|gb|AAY23691.1| farnesyl diphosphate synthase [Roseobacter litoralis Och 149] Length = 144 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 56/137 (40%), Positives = 86/137 (62%), Gaps = 11/137 (8%) Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG+PTVH ++D+ TA++AG+ L T AFE+++ P +R+ L LSL G QGM+ Sbjct: 13 RRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASPSAEVRADLALSLARASGAQGMV 72 Query: 161 GGQMLDIQDEF------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GQ LDI E +DE + +Q+ KTGAL+ ++ ++GA +A Q + L+ + Sbjct: 73 LGQALDIAAETAHTPLSLDE--ITRLQQGKTGALIGWSAQAGARLA---QADTGALKRYA 127 Query: 215 ENLGIIFQLADDLLDCE 231 + LG+ FQ+ADD+LD E Sbjct: 128 QALGLAFQIADDILDVE 144 >gi|225428131|ref|XP_002281076.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|225467464|ref|XP_002264102.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 341 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 7/215 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75 T++ ++ + + ++ ++ A+RY++L GGK+ + LF + L A Sbjct: 56 TLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPT 115 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133 A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG+ L F I S Sbjct: 116 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHT 175 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 P + + +++ + ++G GM GQ LD++ V +Q+ K G + + Sbjct: 176 PSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGA---PNSVDFVQRKKFGEMAECSA 232 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 G + A+ ++ RLR +G +G+++Q+ DD+L Sbjct: 233 VCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVL 267 >gi|320161454|ref|YP_004174678.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1] gi|319995307|dbj|BAJ64078.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1] Length = 338 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 13/190 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IR LV A AL AA+E +H +SLIHDD+ D +RRG+PTV + Sbjct: 54 GKRIRPLLVLLSAQAVGGKWEQALPAAAAVELVHNFSLIHDDI--QDQSTLRRGRPTVWV 111 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT---HNIGLQGMLGGQMLD 166 ++ AI AG+ + T AF ++ +L+ I SQ L + H + L+ + GQ LD Sbjct: 112 KWGIAQAINAGDAMFTQAFWALN----RLEQTISSQTALEASRILHQVCLR-LTEGQYLD 166 Query: 167 IQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + E +D + M KT AL+ E G + +HAS ++ LR FGENLG+ FQ+ Sbjct: 167 LAYEKVDTLPLEAYWPMVGGKTAALLGGCVELGGLCSHASPEQRTALREFGENLGLAFQV 226 Query: 224 ADDLLDCEED 233 DD L D Sbjct: 227 LDDWLGIWGD 236 >gi|331084735|ref|ZP_08333823.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410829|gb|EGG90251.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 296 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 80/224 (35%), Positives = 122/224 (54%), Gaps = 5/224 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 + KR T + +L+ +Q ++ A+ Y+L+ GGK++R L+ E +F Sbjct: 5 DEKRKKTEEIEQILKAYLPVQEGKQQVIMEAMEYSLMAGGKRLRPMLLWETFQMFGSAAK 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T AAIE IH YSL+HDDLP+MD+ RRG+ T HI Y E I+AG+ LL YAFE Sbjct: 65 TVRPFMAAIEMIHTYSLVHDDLPAMDDDDYRRGRKTTHIVYGEDMGILAGDALLNYAFET 124 Query: 131 ISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTG 186 + + + + + L G+ GM+GGQ++D+ + I E + I ++KTG Sbjct: 125 ACTAFEEAPEEATRIGKALQVLAKKAGIYGMIGGQVVDVSASGKNITEDILSFIYELKTG 184 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 AL+ A GAI+A A + E + + +GI FQ+ DD+LD Sbjct: 185 ALLESAMMIGAILAGAEEEEVAVIEQVAKKIGIAFQIQDDILDV 228 >gi|84043358|gb|ABC50110.1| geranylgeranyl pyrophosphate synthase [Brevundimonas vesicularis] Length = 298 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 109/215 (50%), Gaps = 8/215 (3%) Query: 21 DDLLLQTASHMQ---TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76 DDL LQ + + H+ L +A R ALLG GK++R L A+ + AL Sbjct: 20 DDLRLQVQARLAEVAPAHDGLLSTAAREALLGRGKRVRPVLAMLAAAHVGGDPEDALEYA 79 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E +H SL+ DDLP MD+ +RRG+PT+H ++ E TA++A LL A ++ +T Sbjct: 80 CALEMVHAASLVLDDLPCMDDASLRRGQPTLHHRHGEDTAVLAAVALLNQATRLVL--QT 137 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKMKTGALMCFACE 194 R + LT IG G+ GQM L DE+ + I +KTGAL Sbjct: 138 AAPAETRLAALDLLTQAIGFDGLSEGQMRDLRDDARDRDESALRQINDLKTGALFVATVR 197 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 G ++ + RL FGE +G FQL DDLLD Sbjct: 198 GGGLLGGGDAQDLARLSIFGEAIGFAFQLCDDLLD 232 >gi|72536080|gb|AAZ73145.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium DC413] Length = 302 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 110/201 (54%), Gaps = 17/201 (8%) Query: 46 ALLGGKKIRSFLVTECA-SLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 AL GK+IR L+ A L + L+ L A+E +H SLI DD+P MD+ +RRG Sbjct: 48 ALAPGKRIRPVLLMLAAHDLGYRDELSGLLDFACAVEMVHAASLILDDIPCMDDAELRRG 107 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI----RSQLMLSLTHNIGLQGM 159 +PT+H Q+ E AI+A LL+ AF +I+ L D I ++Q + L+H++G+QG+ Sbjct: 108 RPTIHRQFGEPVAILAAVALLSRAFGVIA-----LADGISSQAKTQAVAELSHSVGIQGL 162 Query: 160 LGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + GQ LD+ Q D Q + KT AL A + AI+A A +E+L F Sbjct: 163 VQGQFLDLTEGGQPRSADAIQ--LTNHFKTSALFSAAMQMAAIIAGAPLASREKLHRFAR 220 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG FQL DDL D + D K Sbjct: 221 DLGQAFQLLDDLTDGQSDTGK 241 >gi|262411038|gb|ACY66885.1| geranyl geranyl pyrophosphate synthase [Linum usitatissimum] Length = 215 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 88/152 (57%), Gaps = 3/152 (1%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH SLIHDDLP MDN +RRGKPT H + E A++AG+ LL +AFE ++ + Sbjct: 1 IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHMAVSTVGVPAA 60 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAI 198 + + L +IG +G++ GQ++DI E + Q+ I KTGAL+ + GAI Sbjct: 61 KIVRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKTGALLEASVVLGAI 120 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + + E E+LR F +G++FQ+ D+LD Sbjct: 121 LGGGTDEEVEKLRSFARCIGLLFQVVGDILDV 152 >gi|304407042|ref|ZP_07388696.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] gi|304344029|gb|EFM09869.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] Length = 304 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 96/164 (58%), Gaps = 8/164 (4%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKT 136 IE IH YSLIHDDLP+MDN RRGK T H + + AI+AG+ LLT+AF I S+ + Sbjct: 80 IEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDAMAILAGDALLTHAFHAIVQSTRQH 139 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFA 192 + + +++ L+ G GM+GGQ D+ E ID Q+ I KT L+ F+ Sbjct: 140 GVSAEVSLKIVEELSVMAGASGMVGGQAADMLGEQGVTSID--QLRYIHLHKTSDLIVFS 197 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +GA++ A++ + E++ FG +G+ FQ+ DD+LD D K Sbjct: 198 LRAGAMIGGATEEQLEQITKFGTAIGLAFQIQDDILDLVGDEAK 241 >gi|294674496|ref|YP_003575112.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola 23] gi|294472118|gb|ADE81507.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola 23] Length = 324 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/226 (34%), Positives = 119/226 (52%), Gaps = 23/226 (10%) Query: 14 KRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 K+++ LD+L+ Q AS L I+Y L +GGK++R L +L+ + L Sbjct: 9 KKVNEALDNLVYDRQPAS---------LYDPIKYVLSIGGKRVRPVLTMLAYNLYKDDPL 59 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + + +E H ++L+HDDL MD+ +RRG TVH ++D AI++G+ +L AFE Sbjct: 60 SIMSQALGLETYHNFTLLHDDL--MDHADMRRGHETVHKKWDANRAILSGDTMLLQAFER 117 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGA 187 + K ++ + T IG GQ LD++ E + E + + ++KT Sbjct: 118 VEDCDPA-KLPAVFKVFIQTTLEIG-----EGQQLDVEFEQRNDVTEDEYIEMIRLKTSV 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ AC+ GAIMA A + E + FGE LG+ FQL DDLLD D Sbjct: 172 LLACACKVGAIMADAPAEDIENMYKFGEKLGLAFQLQDDLLDVYGD 217 >gi|303247299|ref|ZP_07333573.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ] gi|302491458|gb|EFL51346.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ] Length = 299 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 80/197 (40%), Positives = 114/197 (57%), Gaps = 8/197 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LLSA+ Y+L+ GGK++R L A LF + + A E IH YSLIHDDLP+MD+ Sbjct: 35 LLSAMEYSLMAGGKRLRPCLCLSFAELFGAPRASVMPFAAGFELIHTYSLIHDDLPAMDD 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+P+ H + E AI+AG+ LLT AF +S + + + G Sbjct: 95 DDLRRGRPSNHKVFGEAGAILAGDALLTEAFGCMSRSWPAVAAELVLPALAEAGRAAGAA 154 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM+GGQMLD+ EF V + +Q +KTGAL+ +C GAI+A A+++ R R Sbjct: 155 GMVGGQMLDM--EFTARQGVTLAELAHMQALKTGALITASCVCGAILAGAAEDGISRARE 212 Query: 213 FGENLGIIFQLADDLLD 229 +GE +G FQ+ DD+LD Sbjct: 213 YGEAVGAAFQIVDDILD 229 >gi|326317942|ref|YP_004235614.1| geranyltranstransferase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374778|gb|ADX47047.1| Geranyltranstransferase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 306 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/184 (38%), Positives = 110/184 (59%), Gaps = 4/184 (2%) Query: 42 AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYA+LG GK++R LV A + + ALR ++E IH YSL+HDD+P MDN + Sbjct: 47 AMRYAVLGAGKRLRPLLVLAAAEAVSGHAGAALRAACSVELIHAYSLVHDDMPCMDNDVL 106 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPTVH+Q+ + A++AG+ L AFE++ +P+ + + ++++L L G GM Sbjct: 107 RRGKPTVHVQFGQAQALLAGDALQALAFELL-TPEDDVPEAMQARLCRLLARAAGADGMA 165 Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQ +D+ I E ++ + ++KTGAL+ + GA A+ + L +G LG Sbjct: 166 GGQAIDLASVGIALSEDELRRMHRLKTGALLQSSVLMGAACGAAAPAAWDALSRYGAALG 225 Query: 219 IIFQ 222 + FQ Sbjct: 226 LAFQ 229 >gi|156932566|ref|YP_001436482.1| hypothetical protein ESA_00347 [Cronobacter sakazakii ATCC BAA-894] gi|112702897|emb|CAL34117.1| geranylgeranyl pyrophosphate synthase CRTE [Cronobacter sakazakii] gi|156530820|gb|ABU75646.1| hypothetical protein ESA_00347 [Cronobacter sakazakii ATCC BAA-894] Length = 301 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/227 (33%), Positives = 119/227 (52%), Gaps = 12/227 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF- 65 +LQ + T LD+LL Q D + +A+R AL GK++R L+ A Sbjct: 14 ELQALRDALQTRLDELL------PPGQERDLVCAAMREGALTPGKRVRPLLLILAARDLG 67 Query: 66 -NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + + + A+E +H SL+ DD+P MDN +RRGKPT+H QY E AI+A LL Sbjct: 68 CDASQPALMDLACAVEMVHAASLMLDDIPCMDNALLRRGKPTIHRQYGESVAILAAVALL 127 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182 + AF +++ L D+ ++Q + L+ +GLQG++ GQ D+ + + + Sbjct: 128 SRAFGVVAQANP-LSDSCKTQAVSELSSAVGLQGLVQGQFRDLSEGNQARSAEAILATND 186 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KT L + AI A AS + + +LR F +LG FQL DDL D Sbjct: 187 LKTSVLFDATLQIAAIAAGASASVRHKLREFSRHLGQAFQLLDDLAD 233 >gi|221135092|ref|ZP_03561395.1| polyprenyl synthetase [Glaciecola sp. HTCC2999] Length = 294 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 83/216 (38%), Positives = 121/216 (56%), Gaps = 8/216 (3%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 LL Q H T D LL+A+ YALLG GK++R L++ + V+ + AIEC Sbjct: 17 LLSQCIRHYPTLPCD-LLAAMEYALLGQGKRMRPLLISLVGDVLGVSKEKLAPLMVAIEC 75 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSL+HDDLP MD+ +RRG PT HIQY TAI+ G+ L + AFE ++ L + Sbjct: 76 IHAYSLVHDDLPDMDDDDLRRGMPTCHIQYTPGTAILVGDALQSLAFEHLAQHPV-LSAS 134 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + ++ L G +GM GGQ +D+ ++ ID + + ++KTGAL+ AC I Sbjct: 135 EKVAVIQILAKASGYEGMCGGQAIDLHFTNQDIDLETLTQLHRLKTGALLG-ACVDMVIA 193 Query: 200 AHASQNEKER--LRCFGENLGIIFQLADDLLDCEED 233 S + + + L F +LG+ FQ+ DD+LD D Sbjct: 194 LVPSLDVEHQALLHTFSRSLGLAFQVQDDILDITSD 229 >gi|260912495|ref|ZP_05919030.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295] gi|260633374|gb|EEX51529.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295] Length = 324 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 12/199 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L IRY L +GGK+IR L +LF + + L +E H Y+L+HDDL MDN Sbjct: 27 LYEPIRYVLSIGGKRIRPTLALLAYNLFKDDPESILAPACGLETYHNYTLLHDDL--MDN 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG PTVH ++D TAI++G+ +L A+++++ D+ + + ++ L L+ Sbjct: 85 AALRRGMPTVHKRWDANTAILSGDSMLVLAYQLVAQC-----DSSKLKPVMELFTETALE 139 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ D+ E + E + + ++KT L+ + GA++A A Q + + L FG Sbjct: 140 -IGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACGMKMGALLADAPQQDADLLYKFG 198 Query: 215 ENLGIIFQLADDLLDCEED 233 E +G+ FQL DD LD D Sbjct: 199 EQIGLAFQLQDDFLDVYGD 217 >gi|187932330|ref|YP_001886591.1| geranyltranstransferase [Clostridium botulinum B str. Eklund 17B] gi|187720483|gb|ACD21704.1| putative geranyltranstransferase [Clostridium botulinum B str. Eklund 17B] Length = 289 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 117/204 (57%), Gaps = 8/204 (3%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + +N + + Y++ +GGK+IR L+ SL+ N + + AAIE IH YSLIHD Sbjct: 21 RNSYNKVVYESAGYSVNIGGKRIRPILLILTYSLYKDNIEKIMPMAAAIEMIHTYSLIHD 80 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS- 149 DLP MD+ +RRGKPT H + E A++AG+ LL A ++ +L + S L S Sbjct: 81 DLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKSSLELGE---SALKASY 137 Query: 150 -LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 ++ G +GM+GGQ++D+ E I + ++ + + KTG L+ + +G I+A + Sbjct: 138 EISKAAGPEGMIGGQVVDVLSEVSEISKEELEYMHEKKTGELIRVSIVAGGILARVPSGD 197 Query: 207 KERLRCFGENLGIIFQLADDLLDC 230 E L +G+ LG+ FQ+ DD+LD Sbjct: 198 IEALNEYGKKLGLAFQIKDDILDV 221 >gi|254262249|emb|CAZ90576.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter helveticus] Length = 313 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 12/227 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66 +LQ K I+ LD LL QT+ +D + A+R A L GK+IR L+ A Sbjct: 15 ELQSMRKNIEHRLDSLL------PQTEESDLVTQAMRDATLAPGKRIRPLLMLLTARDLG 68 Query: 67 V--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 +H L + A+E IH SL DD+P MDN +RRG PT+H ++ E AI+A LL Sbjct: 69 CEPSHPGLLDLACAVEMIHAASLTLDDIPCMDNAAMRRGLPTIHRKFGENVAILAAVALL 128 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182 + AF ++S+ + L D R+ + L+ +G QG++ GQ D+++ E + Sbjct: 129 SKAFGVVSAAEG-LTDAGRAIAVGELSAAVGTQGLVKGQYQDLREGCEPRSTEAIHTTND 187 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KTG L + + AI A+AS + RLR F + G FQL DDL+D Sbjct: 188 LKTGVLFSASLQMAAIAANASGAARARLRSFALDFGQAFQLLDDLID 234 >gi|284044529|ref|YP_003394869.1| polyprenyl synthetase [Conexibacter woesei DSM 14684] gi|283948750|gb|ADB51494.1| Polyprenyl synthetase [Conexibacter woesei DSM 14684] Length = 296 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 80/225 (35%), Positives = 115/225 (51%), Gaps = 12/225 (5%) Query: 17 DTILDDLLLQTASHM--------QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 D DDL Q ++ +T D L A+RY+LL GGK+IR L A Sbjct: 4 DAYPDDLRRQVEEYLAAIRFVAAETAGADGLEEAMRYSLLAGGKRIRPVLALATARAIER 63 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AL + AA+E IH YSLIHDDLP+MD+ +RRG+PT H + E AI+AG+GL A Sbjct: 64 DPAEALPIAAALELIHTYSLIHDDLPAMDDDDLRRGRPTCHKAFGENVAILAGDGLYAEA 123 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMIQKMKTG 186 F + + I + + L G+ GM+GGQ LD+ D D + + +KTG Sbjct: 124 FRHVLERQAGEPAAILAAVR-ELASATGVNGMVGGQYLDVTDSAPRDAAGLRHLHSLKTG 182 Query: 187 ALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDC 230 L+ + ++A + R F LG++FQ+ DD+LD Sbjct: 183 RLIGASIMCPLLLAPDQPRATIDSFRSFASELGVLFQIVDDILDV 227 >gi|303233683|ref|ZP_07320337.1| polyprenyl synthetase [Finegoldia magna BVS033A4] gi|302495117|gb|EFL54869.1| polyprenyl synthetase [Finegoldia magna BVS033A4] Length = 269 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 6/202 (2%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 ND++ A++Y L+ G K++R L +FN + + +IE IH YSL+HDDL Sbjct: 21 NDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNESISEPMNYALSIELIHNYSLVHDDLE 80 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MD+ RRGK TVH +Y E A++ G+ LL Y+FE++S +K+ + + + Sbjct: 81 CMDDDDYRRGKLTVHKKYGEDIAVLVGDALLNYSFEVLSES---IKNEVDAMCANYIVKK 137 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G GM+ GQ+LDI E I E + I KT L+ + S I++ +L + Sbjct: 138 SGCFGMIRGQLLDIDSE-ISEDNIIEIYDKKTCNLLKASTVSAGILSKVDDETLLKLENY 196 Query: 214 GENLGIIFQLADDLLDCEEDLP 235 NLG+ FQ+ DDL+D E D+ Sbjct: 197 AFNLGMAFQIIDDLMDYENDIK 218 >gi|254490429|ref|ZP_05103615.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010] gi|224464173|gb|EEF80436.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010] Length = 288 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 80/230 (34%), Positives = 126/230 (54%), Gaps = 12/230 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 +Q++ +I+ LD L + + + RL+ A+RYA LGG K++R+ LV Sbjct: 1 MQQHQAQIELALDKRL----TAQKQPGSQRLVEAMRYATLGGGKRLRALLVYATGEAMGA 56 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N + AA+E IH YSL+HDD+P MD+ +RRG+PT H +DE TA++ G+ L T A Sbjct: 57 NPVALDAAAAAVEMIHAYSLVHDDMPIMDDDDLRRGRPTCHKAFDEATALLVGDALQTMA 116 Query: 128 FEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMK 184 FE + + LM+ L G GM GGQ +D++ + +D + + K+K Sbjct: 117 FETLCDNSLTAAQQV---LMIKRLAQASGAFGMAGGQAVDLESVGKKLDLNALQSMHKLK 173 Query: 185 TGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 TGAL+ + GA+ A +E +RL + + +G+ FQ+ DD+LD D Sbjct: 174 TGALIRASVLLGALAASDYDDETLQRLERYADCIGLAFQVQDDVLDVIAD 223 >gi|83589030|ref|YP_429039.1| polyprenyl synthetase [Moorella thermoacetica ATCC 39073] gi|83571944|gb|ABC18496.1| Polyprenyl synthetase [Moorella thermoacetica ATCC 39073] Length = 320 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 12/194 (6%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + RL + YAL GGK +R LV CA + L A RV AAIE +H SL+HDD+ + Sbjct: 18 DPRLQELLDYALEGGKGLRPTLVFLCARFGIYDALEAGRVAAAIELVHLASLVHDDI--L 75 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D +RR +P ++ Y V A++ G+ L AF +++ K ++ ++T I Sbjct: 76 DGAAVRRNRPALYRAYGTVPAVLTGDYLFATAFGLLAKGK--------KAVLYTVTEAI- 126 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + M G++ ++ F KT AL+ AC GAI+ +N++E L FG Sbjct: 127 -RSMCSGEIGQLKGGLAGPEAYFTYIGQKTAALISAACRCGAILGRVKRNQQECLAQFGW 185 Query: 216 NLGIIFQLADDLLD 229 +LG+ +Q+ DD LD Sbjct: 186 HLGLAYQIVDDCLD 199 >gi|326800486|ref|YP_004318305.1| geranyltranstransferase [Sphingobacterium sp. 21] gi|326551250|gb|ADZ79635.1| Geranyltranstransferase [Sphingobacterium sp. 21] Length = 324 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 106/202 (52%), Gaps = 12/202 (5%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I+Y L +GGK++R L A LF L AIE H ++L+HDD+ MD Sbjct: 27 LYEPIKYFLAIGGKRLRPVLTLLAAELFGATIKEGLPAALAIEMFHNFTLMHDDI--MDE 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+ T+H ++D TAI++G+ L A+++++ K +L + N Q Sbjct: 85 APLRRGRETIHKKWDINTAILSGDATLIRAYQLLAECKPELLAELLK------VFNKMAQ 138 Query: 158 GMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ LD+ E + E + + ++KT L+ A E GAI+ A + ++ L FG Sbjct: 139 EVCEGQQLDMDFEKLATVTEEEYLHMIRLKTSVLLGAALEIGAILGGADKQDRSNLYTFG 198 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 N+GI FQL DD+LD D K Sbjct: 199 VNIGIAFQLQDDILDVYGDPSK 220 >gi|294778249|ref|ZP_06743675.1| polyprenyl synthetase [Bacteroides vulgatus PC510] gi|294447877|gb|EFG16451.1| polyprenyl synthetase [Bacteroides vulgatus PC510] Length = 325 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 79/224 (35%), Positives = 121/224 (54%), Gaps = 22/224 (9%) Query: 21 DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D LL + +++ T R L + I Y L LGGK+IR L+ L+ N L Sbjct: 6 DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134 A IE H Y+L+HDDL MD +RR KPTVH +DE TAI++G+ +L A+ ++++ P Sbjct: 66 AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCP 123 Query: 135 KTQLKD--NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM-IQKMKTGALM 189 + LK +I SQ L + GQ D++ E ++ V +M + ++KT L+ Sbjct: 124 ERYLKQVMDIFSQTALEICE---------GQQWDMEFETRNDVTVPEYMEMIRLKTSVLL 174 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GA++ AS+++ +L FG +G+ FQL DD LD D Sbjct: 175 SAALKIGAVLGGASEDDARKLYDFGIKMGLAFQLQDDYLDVYGD 218 >gi|110677528|ref|YP_680535.1| geranylgeranyl pyrophosphate synthetase [Roseobacter denitrificans OCh 114] gi|109453644|gb|ABG29849.1| geranylgeranyl pyrophosphate synthetase [Roseobacter denitrificans OCh 114] Length = 294 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 103/199 (51%), Gaps = 11/199 (5%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSM 95 RL SA+ YA GG +IR ++T A + A A+E IHC SL+HDDLP Sbjct: 27 RLSSALGYATAPGGARIRPTILTSVALACGDDQPKLTDAAASALELIHCASLVHDDLPCF 86 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ RRGKP+VH Y E A++ G+ L+ AFEI++ D + +Q++L L+ G Sbjct: 87 DDADTRRGKPSVHKAYSEPLAVLTGDSLIVLAFEILARQSGLAPDRV-AQMILILSQRTG 145 Query: 156 LQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + G+ GQ + + E + + KTGAL A + GA+ A+ E E G Sbjct: 146 MPGGICAGQGWESEAEI----DLSAYHQAKTGALFIAATQMGAV---AAGQEAEPWFELG 198 Query: 215 ENLGIIFQLADDLLDCEED 233 +G FQ+ADDL D D Sbjct: 199 ARIGEAFQVADDLRDALYD 217 >gi|88812690|ref|ZP_01127937.1| geranyltranstransferase [Nitrococcus mobilis Nb-231] gi|88790106|gb|EAR21226.1| geranyltranstransferase [Nitrococcus mobilis Nb-231] Length = 298 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 82/228 (35%), Positives = 123/228 (53%), Gaps = 13/228 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 L E R++ L+ L +H RL A+RYA+LGG K++R LV + Sbjct: 8 LPEYQARVEAALERWLPPAQTH-----PARLHEAMRYAVLGGGKRMRPLLVYATGDALRL 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+E IHCYSL+HDDLP+MD+ +RRG+PT H YDEVTAI+ G+ L + A Sbjct: 63 PRQVLDAPACAVELIHCYSLVHDDLPAMDDDDLRRGRPTCHRAYDEVTAILVGDALQSLA 122 Query: 128 FEIISSPKTQLKDNIRSQLML--SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-- 183 F ++S + ++ +L + L+ G +GM GGQ LD + + V ++ M Sbjct: 123 FRVLSHCRDGEAGPVQGRLRMIEVLSLAAGSRGMAGGQSLDYE-AVGRQVTVAELEDMHI 181 Query: 184 -KTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL+ + GA+ A+ ERL + + +G+ FQ+ DD+LD Sbjct: 182 HKTGALIRASVMLGALADTTANTTCTERLDHYAKCVGLAFQVQDDVLD 229 >gi|296136077|ref|YP_003643319.1| Polyprenyl synthetase [Thiomonas intermedia K12] gi|295796199|gb|ADG30989.1| Polyprenyl synthetase [Thiomonas intermedia K12] Length = 324 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 12/205 (5%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+ YA +GGK++R LV + R A+E +H YSL+HDDLP MD Sbjct: 54 QLHEAMHYAAAMGGKRVRPLLVWAAGECVQADDQALDRAACAVELVHAYSLVHDDLPCMD 113 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PT H+Q+ E A++AG+ L A+E++ +P+ + ++++L L G Sbjct: 114 DDVLRRGQPTTHVQFGEALALLAGDALQALAYEVL-TPEADIAPALQARLCALLARASGA 172 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGA------LMCFACESGAIMAHASQNEKE 208 GM GGQ LDI + + + KTGA LM AC G A +Q Sbjct: 173 DGMAGGQTLDILATGGAVSGDDLMHMHSRKTGALLKASVLMGAAC-GGFDTARPAQTYTA 231 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 L +G+ +G+ FQ+ DD+LD D Sbjct: 232 -LETYGDAVGLAFQVVDDILDVTAD 255 >gi|150399805|ref|YP_001323572.1| polyprenyl synthetase [Methanococcus vannielii SB] gi|150012508|gb|ABR54960.1| Polyprenyl synthetase [Methanococcus vannielii SB] Length = 317 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 114/201 (56%), Gaps = 12/201 (5%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 + + L +A ++ L GGK+IR +L L + L ++E IH Y+LIHDD Sbjct: 19 VEKDTNLYNASKHLLFAGGKRIRPYLSVLTYLLKRDDISEVLAPAISVELIHNYTLIHDD 78 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + MDN RRGKPTVHI Y E TAI+AG+ L AFE +S+ + D+ ++ +L + Sbjct: 79 I--MDNDDERRGKPTVHIVYGEPTAILAGDLLYAKAFEALSN----IGDSKKALEVLKVL 132 Query: 152 HNIGLQGMLGGQM--LDIQDEFID-ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 ++ + GQ ++ ++EF E + MI K KTGAL+ E GAIMA S E+E Sbjct: 133 SKACVE-VCEGQTDDMEFENEFPTLEEYLSMISK-KTGALIVAPIEIGAIMAECSSEERE 190 Query: 209 RLRCFGENLGIIFQLADDLLD 229 L + + +G+ FQ+ DD+LD Sbjct: 191 ALYNYAKRIGMTFQIQDDVLD 211 >gi|301308384|ref|ZP_07214338.1| polyprenyl synthetase [Bacteroides sp. 20_3] gi|300833854|gb|EFK64470.1| polyprenyl synthetase [Bacteroides sp. 20_3] Length = 324 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L +++N + A++ +E H ++L+HDDL MD Sbjct: 27 LYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPALGLEVFHNFTLLHDDL--MDE 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGL 156 RR KPTVH ++ TAI++G+ +L A+++I S+ LK Q++ T Sbjct: 85 ADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHLK-----QVLDLFTQTAA- 138 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GGQ D++ E + E + + ++KT L+ A ++GA++ ASQ + + L F Sbjct: 139 -EICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLACALKTGALLGGASQKDADHLYAF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G N+G+ FQL DDLLD D Sbjct: 198 GINIGLAFQLQDDLLDVYGD 217 >gi|325913420|ref|ZP_08175786.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B] gi|325477189|gb|EGC80335.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B] Length = 288 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 28/209 (13%) Query: 36 NDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90 ND S I Y++L GGK++R L A+L ++H + +++ IE IH YSLIHD Sbjct: 27 NDHKFSEIMSYSVLAGGKRLRPLLF--LATLEILSHPISEKEIKIACGIELIHTYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP+MDN RRGK T H ++ E AI+AG+ LL + I+ +L+ + Sbjct: 85 DLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSY------ELIKVI 138 Query: 151 THNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 T IG GM GGQ +DI + FID+ + +KTG L+ + + A A Sbjct: 139 TRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEF-----LKTGCLIVASVQMAAKYA 193 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229 ++S + L F E G +Q+ DD++D Sbjct: 194 NSSDKVQMNLLHFAEAFGRAYQIYDDIVD 222 >gi|312871899|ref|ZP_07731983.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a] gi|312872399|ref|ZP_07732468.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1] gi|311091981|gb|EFQ50356.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1] gi|311092621|gb|EFQ50981.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a] Length = 288 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 28/209 (13%) Query: 36 NDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90 ND S I Y++L GGK++R L A+L ++H + +++ IE IH YSLIHD Sbjct: 27 NDHKFSEIMSYSVLAGGKRLRPLLF--LATLEILSHPISEKEIKIACGIELIHTYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP+MDN RRGK T H ++ E AI+AG+ LL + I+ +L+ + Sbjct: 85 DLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSY------ELIKVI 138 Query: 151 THNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 T IG GM GGQ +DI + FID+ + +KTG L+ + + A A Sbjct: 139 TRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEF-----LKTGCLIVASVQMAAKYA 193 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229 ++S + L F E G +Q+ DD++D Sbjct: 194 NSSDKVQMNLLHFAEAFGRAYQIYDDIVD 222 >gi|331006565|ref|ZP_08329857.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989] gi|330419634|gb|EGG94008.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989] Length = 224 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 101/164 (61%), Gaps = 14/164 (8%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-----S 132 A+E IH YSLIHDDLP+MD+ +RRGKPT HI +DE TAI+AG+ L +AF I+ + Sbjct: 2 AVEAIHAYSLIHDDLPAMDDDDLRRGKPTCHIAFDEATAILAGDALQAFAFNILCEAVDA 61 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190 P QLK ++ +L+H G GM+GGQ +D+ + + Q+ + ++KTGAL+ Sbjct: 62 DPSIQLK------MLHTLSHASGANGMVGGQSIDLAAVQQTLTLNQLETMHRLKTGALIS 115 Query: 191 FACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ AS+++ + L + +G+ FQ+ DD+LD D Sbjct: 116 ASTRLGALSTGIASESQLQALHEYANAIGLAFQVQDDILDVTSD 159 >gi|309805530|ref|ZP_07699575.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c] gi|308165181|gb|EFO67419.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c] Length = 288 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 28/209 (13%) Query: 36 NDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90 ND S I Y++L GGK++R L A+L ++H + +++ IE IH YSLIHD Sbjct: 27 NDHKFSEIMSYSVLAGGKRLRPLLF--LATLEILSHPISEKEIKIACGIELIHTYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP+MDN RRGK T H ++ E AI+AG+ LL + I+ +L+ + Sbjct: 85 DLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSY------ELIKVI 138 Query: 151 THNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 T IG GM GGQ +DI + FID+ + +KTG L+ + + A A Sbjct: 139 TRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEF-----LKTGCLIVASVQMAAKYA 193 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229 ++S + L F E G +Q+ DD++D Sbjct: 194 NSSDKVQMNLLHFAEAFGRAYQIYDDIVD 222 >gi|259501558|ref|ZP_05744460.1| geranyltranstransferase [Lactobacillus iners DSM 13335] gi|302191468|ref|ZP_07267722.1| geranyltranstransferase [Lactobacillus iners AB-1] gi|309804209|ref|ZP_07698286.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d] gi|309806895|ref|ZP_07700881.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b] gi|309808828|ref|ZP_07702713.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a] gi|312874432|ref|ZP_07734462.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d] gi|325911777|ref|ZP_08174181.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D] gi|329919888|ref|ZP_08276826.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G] gi|259167076|gb|EEW51571.1| geranyltranstransferase [Lactobacillus iners DSM 13335] gi|308163612|gb|EFO65882.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d] gi|308166713|gb|EFO68906.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b] gi|308167954|gb|EFO70087.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a] gi|311090044|gb|EFQ48458.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d] gi|325476283|gb|EGC79445.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D] gi|328936978|gb|EGG33408.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G] Length = 288 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 28/209 (13%) Query: 36 NDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90 ND S I Y++L GGK++R L A+L ++H + +++ IE IH YSLIHD Sbjct: 27 NDHKFSEIMSYSVLAGGKRLRPLLF--LATLEILSHPISEKEIKIACGIELIHTYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP+MDN RRGK T H ++ E AI+AG+ LL + I+ +L+ + Sbjct: 85 DLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSY------ELIKVI 138 Query: 151 THNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 T IG GM GGQ +DI + FID+ + +KTG L+ + + A A Sbjct: 139 TRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEF-----LKTGCLIVASVQMAAKYA 193 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229 ++S + L F E G +Q+ DD++D Sbjct: 194 NSSDKVQMNLLHFAEAFGRAYQIYDDIVD 222 >gi|15618657|ref|NP_224943.1| geranyl transtransferase [Chlamydophila pneumoniae CWL029] gi|15836281|ref|NP_300805.1| geranyl transtransferase [Chlamydophila pneumoniae J138] gi|16752293|ref|NP_445662.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydophila pneumoniae AR39] gi|33242107|ref|NP_877048.1| geranylgeranyl pyrophosphate synthase [Chlamydophila pneumoniae TW-183] gi|4377054|gb|AAD18886.1| Geranyl Transtransferase [Chlamydophila pneumoniae CWL029] gi|7190037|gb|AAF38891.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydophila pneumoniae AR39] gi|8979121|dbj|BAA98956.1| geranyl transtransferase [Chlamydophila pneumoniae J138] gi|33236617|gb|AAP98705.1| geranylgeranyl pyrophosphate synthase [Chlamydophila pneumoniae TW-183] gi|269302537|gb|ACZ32637.1| polyprenyl synthetase [Chlamydophila pneumoniae LPCoLN] Length = 289 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 11/203 (5%) Query: 41 SAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 S + YAL GG K++R LV A +NH + A+E +H +LI DDLP MDN Sbjct: 32 SPVEYALQGGGKRLRPGLVCMMAQGLGLNH-DVMDSALAVEFVHTSTLIADDLPCMDNDD 90 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--------NIRSQLMLSLT 151 RRG+PTVH +DE TA++A L+ A+ + +LK+ +I ++ +T Sbjct: 91 ERRGRPTVHKAFDEATALLASYALIPAAYSHLRLNAKKLKEQGCDPREIDIAYNIIGDIT 150 Query: 152 -HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 NIG G+LGGQ D+ + V I KTG+L AC SG + + Sbjct: 151 DKNIGCSGVLGGQYDDMFFSNRGQEHVQSIMIKKTGSLFEIACISGWLFGGGDPQFAPII 210 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 F N G++FQ+ DD D ++D Sbjct: 211 TSFSNNFGLLFQIKDDFSDLQKD 233 >gi|150401609|ref|YP_001325375.1| polyprenyl synthetase [Methanococcus aeolicus Nankai-3] gi|150014312|gb|ABR56763.1| Polyprenyl synthetase [Methanococcus aeolicus Nankai-3] Length = 320 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 118/220 (53%), Gaps = 26/220 (11%) Query: 23 LLLQTASHMQTQHND--RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +LL+ + Q N +L A ++ L GGK+IR +L L + L ++ Sbjct: 8 ILLKIEEELNRQVNKEGKLYEASKHLLFAGGKRIRPYLSVLTYLLKKDDIDEVLTPAVSV 67 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH YSLIHDD+ MDN RRGKPTVHI Y E AI+AG+ L T AF IS Q++ Sbjct: 68 ELIHGYSLIHDDI--MDNDSERRGKPTVHIVYGEPIAILAGDLLNTLAFNAIS----QME 121 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALM 189 + ++ +L + ++ + GQ D++ DE+ D MI K KTGAL+ Sbjct: 122 NLEKAHEILKIVSKASVK-VCEGQATDMEFEEREVIPTIDEYFD-----MISK-KTGALI 174 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 E GA+MA ++ E++ + + + +G+ FQ+ DD+LD Sbjct: 175 VAPIEIGAVMADFTEEERKAICEYAKRIGMTFQIQDDVLD 214 >gi|325103979|ref|YP_004273633.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145] gi|324972827|gb|ADY51811.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145] Length = 324 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 127/223 (56%), Gaps = 15/223 (6%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 +L D + T S+ + N L + Y L LGGK++R L+ LF + A++ Sbjct: 9 LLLDQEINTYSYPSSPRN--LYEPVSYLLGLGGKRLRPALLLLATDLFGGDVEKAVKPAM 66 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIE H +SL+HDD+ MD +RRGKPTVH ++ + TAI++G+ +L A+++I + Sbjct: 67 AIEFFHNFSLMHDDI--MDKAPLRRGKPTVHEKWSDSTAILSGDIMLIEAYKLICEVEA- 123 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACE 194 ++ L + + I + + GQ +D+ ++EF+ + + ++KT L+ A + Sbjct: 124 ----VKLPACLKIFNTISTE-VCEGQQMDMNFEKEEFVSIEEYIEMIRLKTAVLLGGALK 178 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 GA++A AS+N++E + FG LG+ FQL DD+LD D P+K Sbjct: 179 IGAVIADASENDQELINDFGTKLGVAFQLQDDILDVYGD-PEK 220 >gi|146299023|ref|YP_001193614.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101] gi|146153441|gb|ABQ04295.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101] Length = 324 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 12/196 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK++R L A +F+ N+ TAL A+E H +SL+HDD+ MD+ Sbjct: 27 LYEPIEYILGLGGKRMRPVLTLMAAEVFDTNYKTALPAAMAVEVFHNFSLVHDDI--MDD 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+ TVH ++D T I++G+ +L A++ + ++ ++ L L+ Sbjct: 85 APLRRGQVTVHEKWDLNTGILSGDAMLILAYQYFEQYEPEVFRDLA-----KLFSKTALE 139 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ D+ E + + KM KT L+ A + GAI+A S+ E + + FG Sbjct: 140 -VCEGQQWDVDFEQRNNVTIPEYLKMIEYKTAVLVAAAMKMGAIVAKTSEKEGDLIYDFG 198 Query: 215 ENLGIIFQLADDLLDC 230 NLG+ FQL DD LD Sbjct: 199 LNLGLAFQLQDDYLDA 214 >gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays] gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays] Length = 367 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 115/202 (56%), Gaps = 16/202 (7%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYALL GGK++R L ++ A+ AA+E +H SL+HDDLP MD+ + Sbjct: 98 AMRYALLAGGKRVRPALCLAACAVVGGPEPWAMPAAAAVEMVHTMSLVHDDLPCMDDDDL 157 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLT 151 RRGKPT H+ Y E A++AG+ LL+ +F ++S P+ +R+ + L Sbjct: 158 RRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPDVDPEKHPARVVRA--IGELA 215 Query: 152 HNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 IG +G++ GQ++D++ ET ++ I KT AL+ + GAI+ + + Sbjct: 216 RCIGSEGLVAGQVVDLEMTGTSETVPLERLEYIHLHKTAALLEASVVIGAIIGGGTDEQI 275 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 ERLR + ++G++FQ+ DD+LD Sbjct: 276 ERLRKYARSIGLLFQVVDDILD 297 >gi|110835026|ref|YP_693885.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis SK2] gi|110648137|emb|CAL17613.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis SK2] Length = 302 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 79/197 (40%), Positives = 111/197 (56%), Gaps = 7/197 (3%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA L GGK+IR LV A L A A+E IH YSL+HDDLP+MD Sbjct: 39 RLSHAMRYAALSGGKRIRPLLVYGAAQLAGAPLAKADVPAVAVELIHAYSLVHDDLPAMD 98 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRG+PT H +DE TAI+AG+ L T AFE+++ +D R L+ L G+ Sbjct: 99 DDDLRRGQPTCHKAFDEATAILAGDTLHTRAFELLAC-HGDYRDGSRISLIQHLCQAAGV 157 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNE-KERLRC 212 GM GQM D+ + +T V +++M KTG L+ + + G +A L Sbjct: 158 DGMAAGQMQDMLAQGQQQT-VAALEEMHYLKTGRLITASLQLGYFVAEKDDPSLLANLTE 216 Query: 213 FGENLGIIFQLADDLLD 229 FG+ +G+ FQ+ DD+LD Sbjct: 217 FGDAIGLAFQIQDDILD 233 >gi|150004490|ref|YP_001299234.1| putative isoprenoid biosynthesis related protein [Bacteroides vulgatus ATCC 8482] gi|149932914|gb|ABR39612.1| putative isoprenoid biosynthesis related protein [Bacteroides vulgatus ATCC 8482] Length = 325 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 22/224 (9%) Query: 21 DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D LL + +++ T R L + I Y L LGGK+IR L+ L+ N L Sbjct: 6 DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134 A IE H Y+L+HDDL MD +RR KPTVH +DE TAI++G+ +L A+ ++++ P Sbjct: 66 AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCP 123 Query: 135 KTQLKD--NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM-IQKMKTGALM 189 + L+ +I SQ L + GQ D++ E ++ V +M + ++KT L+ Sbjct: 124 ERYLRQVMDIFSQTALEICE---------GQQWDMEFETRNDVTVPEYMEMIRLKTSVLL 174 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GA++ AS+++ +L FG +G+ FQL DD LD D Sbjct: 175 SAALKIGAVLGGASEDDARKLYDFGIKMGLAFQLQDDYLDVYGD 218 >gi|21328644|gb|AAM48650.1| geranylgeranyl pyrophosphate synthetase [uncultured marine proteobacterium] Length = 295 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 81/224 (36%), Positives = 118/224 (52%), Gaps = 20/224 (8%) Query: 13 SKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIR-SFLVTECASLFNVN 68 S RI+ + D L QTA +L SA+RYA+ GG +IR + L++ A+ + Sbjct: 4 STRIEAAISDAVNLGQTAPSPA-----KLASALRYAVSPGGARIRPTILMSVAAACGDDR 58 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AA+ECIHC SL+HDDLP D+ RRGKP++H Y E A++AG+ L+ AF Sbjct: 59 PELTNAAAAALECIHCASLVHDDLPCFDDAETRRGKPSLHRAYSEPLAVLAGDSLIVMAF 118 Query: 129 EIISSPKTQLKDNIRS-QLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 +I++ + D R+ LM L G+ G+ GQ + ++ ID + + KTG Sbjct: 119 QILT--RHASIDPQRAIGLMNILAEQTGMPNGICAGQGWE-SEQKID---LRAYHRAKTG 172 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 AL A + GAI A + + L G +G FQ+ADDL D Sbjct: 173 ALFVAATQMGAIAAGQDGAQWDEL---GSRIGEAFQVADDLRDA 213 >gi|218885233|ref|YP_002434554.1| polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756187|gb|ACL07086.1| Polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 313 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 120/212 (56%), Gaps = 22/212 (10%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +++ Y+L GGK++R L A+LF + + AAIE IH YSLIHDDLP+MD Sbjct: 34 RLRASMEYSLNAGGKRVRPVLCLTTAALFGLPTERVMPFAAAIEMIHTYSLIHDDLPAMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ----------- 145 + +RRGKP+ H +DE TAI+AG+GLLT AF+ ++ + + Sbjct: 94 DDDLRRGKPSNHKMFDEATAILAGDGLLTDAFDFMAGVGAGVGAAAGDENGGNAAIPAAN 153 Query: 146 ---LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGA 197 + ++ G GM+GGQ LD+ E+ T V + + MKTGAL+ +C SGA Sbjct: 154 VLAALRAVARAAGAPGMVGGQALDM--EYTGRTGVTLEEMAAMHAMKTGALLRASCLSGA 211 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A + R+ +G ++G FQ+ DD+LD Sbjct: 212 LLAGADADALARIADYGAHIGAAFQIVDDILD 243 >gi|256422682|ref|YP_003123335.1| polyprenyl synthetase [Chitinophaga pinensis DSM 2588] gi|256037590|gb|ACU61134.1| Polyprenyl synthetase [Chitinophaga pinensis DSM 2588] Length = 323 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 117/226 (51%), Gaps = 19/226 (8%) Query: 22 DLLLQTASHMQTQH----NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 DL +Q H +H +L A + L +GGK+IR L LF+ H A VG Sbjct: 6 DLTIQFGEHFSKEHFPKEPKKLYDAASHILNIGGKRIRPILSIMGNELFDDIHPDAFHVG 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E H ++L+HDD+ MD +RR +PTVH Y + AI+AG+ +L +E ++ + Sbjct: 66 TAVELFHNFTLVHDDI--MDKAPLRRNQPTVHTLYGDTAAILAGDVMLIKVYEYLNKVQP 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCF 191 K Q +++ + ++ + GQ +D+ E ++ QV + +KT L+ Sbjct: 124 HYK-----QKLITAFNKAAIE-VCEGQQIDMDFEDMEPEQVKYDDYVKMIALKTSVLLAA 177 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 + + GAI+ S ++ + FG+N+GI FQ+ DD LD D P+K Sbjct: 178 SLQMGAIIGGGSDYNQQHIYEFGKNIGIAFQIQDDYLDAFGD-PEK 222 >gi|225573687|ref|ZP_03782442.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM 10507] gi|225038980|gb|EEG49226.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM 10507] Length = 295 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 109/205 (53%), Gaps = 7/205 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ Y++L GGK++R ++ E +F A+E IH +SLIHDDLP++DN Sbjct: 32 LARAMNYSMLAGGKRLRPLMMQEVYRMFGGTQRVIEPFMVAMEMIHTHSLIHDDLPALDN 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156 RRG+ T + E +I+G LL YA+E+ S R L L L G+ Sbjct: 92 DEYRRGRETTWKVFGEDMGVISGAALLNYAYEVALSGFELTDRTERVVLALRVLAAKTGM 151 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GMLGGQ +D++++ +D + I + KT ALM + GAI+A A + ++ Sbjct: 152 YGMLGGQSVDVENDRKPLDLQLLDYIYENKTSALMEASMMVGAILAGAENTKIRQVEKAA 211 Query: 215 ENLGIIFQLADDLLDC---EEDLPK 236 +G+ FQ+ DD+LD +E+L K Sbjct: 212 GCVGLAFQIEDDILDVTSTQEELGK 236 >gi|186472776|ref|YP_001860118.1| polyprenyl synthetase [Burkholderia phymatum STM815] gi|184195108|gb|ACC73072.1| Polyprenyl synthetase [Burkholderia phymatum STM815] Length = 291 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 18/208 (8%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+RYA+LGG K++R L L AA+E IH YSL+HDD+P MD Sbjct: 25 RLHEAMRYAVLGGGKRVRPLLCHAAGELAGAKAECLDAASAALEMIHVYSLVHDDMPCMD 84 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTH 152 + +RRGKPTVH++YDE TA++ G+ L + AF ++ SP Q + L+ L Sbjct: 85 DDDLRRGKPTVHVKYDEATALLVGDALQSQAFVALTSDVFSPAQQ------AALVRELAL 138 Query: 153 NIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--- 207 G GM GGQ +D+ + Q+ + ++KTGAL+ A GA+ Sbjct: 139 ASGSIGMAGGQAIDLASVGHTLTRPQLETMHRLKTGALLRAAVRMGALTGQVDNGGPDAK 198 Query: 208 --ERLRCFGENLGIIFQLADDLLDCEED 233 + L + +G+ FQ+ DD+LD D Sbjct: 199 ALQALDAYSAAVGLAFQVVDDILDVTTD 226 >gi|126662951|ref|ZP_01733949.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38] gi|126624609|gb|EAZ95299.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38] Length = 324 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 16/198 (8%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK++R L + +FNV+ A+ AIE H +SLIHDD+ MD+ Sbjct: 27 LYEPIEYILSLGGKRMRPVLTLMASEVFNVDCEKAVPAATAIEVFHNFSLIHDDI--MDD 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIG 155 +RRG TVH ++D T I++G+ +L A++ + PKT Q + L Sbjct: 85 APLRRGNQTVHEKWDLNTGILSGDAMLILAYQFFENYEPKT-------FQKLAKLFSKTA 137 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRC 212 L+ + GQ D+ E D+ + KM KT L+ A + GAI+A S + + Sbjct: 138 LE-VCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVGAAMKMGAIVAETSDENADLIYD 196 Query: 213 FGENLGIIFQLADDLLDC 230 FG NLGI FQL DD LD Sbjct: 197 FGLNLGIAFQLQDDYLDA 214 >gi|149914252|ref|ZP_01902783.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. AzwK-3b] gi|149811771|gb|EDM71604.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. AzwK-3b] Length = 260 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 12/185 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG +IR ++ A + A A+E IHC SL+HDDLP D+ IRRGKP+V Sbjct: 8 GGARIRPTILLSVAMACGDDRPDVSDAAASALELIHCASLVHDDLPCFDDADIRRGKPSV 67 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQ-GMLGGQML 165 H + E A++AG+ L+ AFE+++ + + D R ++LM SL G+ G+ GQ Sbjct: 68 HRAFSEPLAVLAGDSLIVLAFEVLA--RQAITDPARAARLMTSLAERTGMPGGICAGQGW 125 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + + E + + KTGAL A E GAI A+ ++ + R G +G FQ+AD Sbjct: 126 ESEPEV----DLAAYHRSKTGALFIAATEMGAI---AAGHDPDNWRDLGALIGEAFQVAD 178 Query: 226 DLLDC 230 DL D Sbjct: 179 DLRDA 183 >gi|332159126|ref|YP_004424405.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Pyrococcus sp. NA2] gi|331034589|gb|AEC52401.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Pyrococcus sp. NA2] Length = 341 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 19/230 (8%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L +++E +K +D L +++ + + + +A Y L GGK++R F+V Sbjct: 6 LFERIREKAKFVDEKLFEIIPEKEPKVLYE------AARHYPLAGGKRVRPFVVLTSTEA 59 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + AL AIE IH YSL+HDD+ MD RRGKPTVH + AI+AG+ L Sbjct: 60 VGGDWRKALYPAVAIELIHNYSLVHDDIMDMDE--TRRGKPTVHRVWGINMAILAGDLLF 117 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183 + AFE IS + ++ +++++ ++ + + GQ +D+ EF + V + + M Sbjct: 118 SKAFEAIS--RAEVPPEKKAKILETIV--LASNELCEGQAMDL--EFENREAVTIEEYMN 171 Query: 184 ----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL + + G I+ S+ L +G N+GI FQ+ DD+LD Sbjct: 172 MVSGKTGALFEASAKIGGIVGSESEEYINALARWGRNVGIAFQIWDDVLD 221 >gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii] Length = 363 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 108/192 (56%), Gaps = 4/192 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L N A+ A+E IH SLIHDDLP MD+ + Sbjct: 102 AMRYSLLAGGKRVRPMLCFAACELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDL 161 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H Y E A++AG+ LL +AFE +++ + + + L ++G +G++ Sbjct: 162 RRGKPTNHKVYGEDVAVLAGDALLAFAFEYLATATIGVPPSRILVAVAELAKSVGTEGLV 221 Query: 161 GGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ+ D+ + + + I KT AL+ + GAI+ + E ++LR F + Sbjct: 222 AGQVADLACTGNPNVGLEMLEFIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFARCI 281 Query: 218 GIIFQLADDLLD 229 G++FQ+ DD+LD Sbjct: 282 GLLFQVVDDILD 293 >gi|299141403|ref|ZP_07034540.1| polyprenyl synthetase [Prevotella oris C735] gi|298577363|gb|EFI49232.1| polyprenyl synthetase [Prevotella oris C735] Length = 323 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 122/225 (54%), Gaps = 19/225 (8%) Query: 21 DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 ++LL++ + DR L + ++Y L +GGK+IR L+ LF + + L Sbjct: 4 EELLVKVNDFLDNLKYDRKPSGLYAPVKYVLSMGGKRIRPVLMLLSYGLFKDDVESVLMP 63 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134 A+E H Y+L+HDDL MDN +RRG TVH ++D TAI++G+ +L A+E ++ Sbjct: 64 ACALETYHNYTLLHDDL--MDNADMRRGHETVHRKWDANTAILSGDSMLVLAYERMAKCN 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191 L D + + +L IG GQ D++ E + E + + ++KT L+ Sbjct: 122 PVYLSDVLHTFTETAL--EIG-----EGQQYDMEFETRNDVTEDEYIEMIRLKTSVLLAC 174 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + GAI+A AS+ +++ L FGE +G+ FQL DD LD D PK Sbjct: 175 AQKIGAILAGASKQDQDNLYKFGEQIGLAFQLQDDYLDVYGD-PK 218 >gi|86140814|ref|ZP_01059373.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella blandensis MED217] gi|85832756|gb|EAQ51205.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella blandensis MED217] Length = 324 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 111/228 (48%), Gaps = 17/228 (7%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 RID + + + + L I Y L LGGK++R L +F +H AL Sbjct: 3 RIDQYTEVFVAYLNDKLAIKEPANLYEPIHYILQLGGKRLRPVLTLMATDIFESDHQKAL 62 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E H +SL+HDD+ MD+ +RRG+ TVH ++D T I++G+ +L A+ Sbjct: 63 DAALAVEVFHNFSLVHDDI--MDDAPLRRGEETVHEKWDVNTGILSGDAMLIRAY----- 115 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGM--LGGQMLDIQDEFIDETQVFMIQKM---KTGAL 188 QL +N + +L + GQ D+ E D+ + KM KT L Sbjct: 116 ---QLFENYEGETFRALAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVL 172 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + A + GAI+A+AS R+ +G +LGI FQL DD LD D PK Sbjct: 173 VGAALKMGAIVANASAENANRIYEYGRDLGIAFQLQDDYLDAFGD-PK 219 >gi|167750990|ref|ZP_02423117.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702] gi|167656169|gb|EDS00299.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702] Length = 302 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 15/233 (6%) Query: 2 NGGLPSKLQEN----SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSF 56 +GG + +E K++ T+ D A + L A Y+L GGK+IR Sbjct: 12 DGGFDAVFREYRAIFEKQLRTVCDSFCDNGAKYKA------LYDAASYSLEAGGKRIRPV 65 Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 L E + + A+ A+E IH +SLIHDDLP MDN +RRG+P+ H + E A Sbjct: 66 LAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDNDDMRRGRPSCHKAHGEAVA 125 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176 ++AG+ L YA + I + + M+ ++ L GM+ GQ +D +F Sbjct: 126 LLAGDALSAYAGKYICDSDLSAE---KKTAMIKELYDRTL-GMIEGQTIDTDGKFDTLDG 181 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + +MKT L+ A G I A A + + R + ++G+ FQ+ DD+LD Sbjct: 182 LLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILD 234 >gi|113868691|ref|YP_727180.1| geranylgeranyl pyrophosphate synthase [Ralstonia eutropha H16] gi|113527467|emb|CAJ93812.1| geranylgeranyl pyrophosphate synthase [Ralstonia eutropha H16] Length = 294 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 104/198 (52%), Gaps = 4/198 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RYA L GGK++R LV + A+E IH YSL+HDD+P MD+ Sbjct: 33 LHEAMRYAALSGGKRVRPLLVHAAGEVSGAAPAACDAAACAVEMIHAYSLVHDDMPCMDD 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+PTVH YDE TA++ G+ L T AF I+ + + R QL+ L G Sbjct: 93 DDLRRGRPTVHKAYDEATALLVGDALQTQAF-IVLAGAGAIAPAARLQLVAELALASGST 151 Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM GGQ +D+Q+ + + + +MKTGAL+ + GA+ L + Sbjct: 152 GMAGGQAIDLQNVGRAMTREALEAMHRMKTGALLRASVRMGALCGEIDAEGLAALDRYAA 211 Query: 216 NLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 212 AVGLAFQVVDDILDVTAD 229 >gi|309809474|ref|ZP_07703332.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D] gi|308170146|gb|EFO72181.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D] Length = 288 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 108/209 (51%), Gaps = 28/209 (13%) Query: 36 NDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90 ND S I Y++L GGK++R L A+L ++H + +++ IE IH YSLIHD Sbjct: 27 NDHKFSEIMSYSVLAGGKRLRPLLF--LATLEILSHPISEKEIKIACGIELIHTYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP+MDN RRGK T H ++ E AI+AG+ LL + I+ +L+ + Sbjct: 85 DLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSY------ELIKVI 138 Query: 151 THNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 T IG GM GGQ +DI + FID+ + +KTG L+ + + A A Sbjct: 139 TRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEF-----LKTGCLIVASVQMAAEYA 193 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229 +S + L F E G +Q+ DD++D Sbjct: 194 SSSDKVQMNLLHFAEAFGRAYQIYDDIVD 222 >gi|254882776|ref|ZP_05255486.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643916|ref|ZP_07998491.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A] gi|254835569|gb|EET15878.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317384440|gb|EFV65407.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A] Length = 325 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 120/224 (53%), Gaps = 22/224 (9%) Query: 21 DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D LL + +++ T R L + I Y L LGGK+IR L+ L+ N L Sbjct: 6 DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134 A IE H Y+L+HDDL MD +RR KPTVH +DE TAI++G+ +L A+ ++++ P Sbjct: 66 AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCP 123 Query: 135 KTQLKD--NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM-IQKMKTGALM 189 + LK +I SQ L + GQ D++ E ++ V +M + ++KT L+ Sbjct: 124 ERYLKQVMDIFSQTALEICE---------GQQWDMEFETRNDVTVPEYMEMIRLKTSVLL 174 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GA++ S+++ +L FG +G+ FQL DD LD D Sbjct: 175 SAALKIGAVLGGGSEDDARKLYDFGIKMGLAFQLQDDYLDVYGD 218 >gi|62959205|gb|AAY23710.1| farnesyl diphosphate synthase [Roseobacter sp. JL-129] Length = 144 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 84/136 (61%), Gaps = 7/136 (5%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG PTVH ++DE TA++ G+ L T FE++ SP+ + +RS L L+L G +GM Sbjct: 12 LRRGLPTVHKKWDEGTAVLVGDALQTLGFELVLSPECHPEPAVRSDLALTLAKAAGAKGM 71 Query: 160 LGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + GQ LDI E D+ ++ +Q KTGAL+ ++ E+GA +A A + L + + Sbjct: 72 VLGQALDIAAETADQPLTLDEIIALQNGKTGALIRWSAEAGARLAKA---DIAPLTAYAD 128 Query: 216 NLGIIFQLADDLLDCE 231 LG+ FQ+ADD+LD E Sbjct: 129 ALGLAFQIADDILDVE 144 >gi|152986216|ref|YP_001346444.1| geranyltranstransferase [Pseudomonas aeruginosa PA7] gi|150961374|gb|ABR83399.1| geranyltranstransferase [Pseudomonas aeruginosa PA7] Length = 295 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 120/224 (53%), Gaps = 10/224 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+D LD L + + RL A+RY+++ GGK++R L A Sbjct: 12 RVDGALDALFVAPREELH-----RLYQAMRYSVMNGGKRVRPLLAYAACEALQGEAQRAD 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL AFE+++ Sbjct: 67 AAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD 126 Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190 + ++ ML+ L G GM+GGQ +D+ + D+ + ++ + KTGAL+ Sbjct: 127 GRRNPQEPTVCLEMLTHLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIE 186 Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ + A L + + +G+ FQ+ DD+LD E D Sbjct: 187 ASVRLGALASGRAEAATLAALERYAQAIGLAFQVQDDILDVESD 230 >gi|89093477|ref|ZP_01166425.1| dimethylallyltransferase [Oceanospirillum sp. MED92] gi|89082167|gb|EAR61391.1| dimethylallyltransferase [Oceanospirillum sp. MED92] Length = 293 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 85/231 (36%), Positives = 131/231 (56%), Gaps = 13/231 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLL-SAIRYALL-GGKKIRSFLVTECASLF 65 +L+ R+D L++ L ++ D LL ++RY+L GGK++R LV + Sbjct: 6 QLKHYQSRVDNHLENCL-------PSESIDPLLQESMRYSLFNGGKRVRPALVYLVNQIL 58 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A AAIECIH YSL+HDDLP+MD+ +RRGKPT HI YDE TAI+AG+ L Sbjct: 59 GGTDEAADNAAAAIECIHSYSLVHDDLPAMDDDDLRRGKPTCHIAYDEATAILAGDALQC 118 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKM 183 AFE++++ + Q D+ + +L+ L+ G GM+ GQ D++ + + Q+ + + Sbjct: 119 LAFELLANDQQQSADS-KIKLIQLLSQASGHGGMVVGQSFDLRHVGKPLTLEQLEAMHQH 177 Query: 184 KTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ A GA S+ + + L + +G+ FQ+ DD+LD E D Sbjct: 178 KTGALLLCAVHMGAACGPRVSKEQLDALTRYALAIGLAFQVQDDILDIEGD 228 >gi|167566511|ref|ZP_02359427.1| geranyltranstransferase [Burkholderia oklahomensis EO147] Length = 248 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 86/155 (55%), Gaps = 4/155 (2%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L + AF ++ L + Sbjct: 30 IHVYSLVHDDMPCMDDDALRRGKPTVHVEYDEATALLVGDALQSQAFVALTD-AAALPLD 88 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM 199 + L+ L G GM GGQ +D+ + + + +MKTGAL+ + GA+ Sbjct: 89 RQPALVRELALASGSIGMAGGQAIDLASVGHALSRDALETMHRMKTGALLRASVRMGALA 148 Query: 200 AHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233 + R L + +G+ FQ+ DD+LD D Sbjct: 149 GETPSEDAMRALDAYAAAVGLAFQVVDDILDVTTD 183 >gi|307543672|ref|YP_003896151.1| polyprenyl synthetase [Halomonas elongata DSM 2581] gi|307215696|emb|CBV40966.1| polyprenyl synthetase [Halomonas elongata DSM 2581] Length = 292 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 125/232 (53%), Gaps = 18/232 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + + +R+D L+ L + ++ +++L +A+R+ +L GGK++R L+ Sbjct: 7 MAADRRRVDECLETLFARG----ESAPSEQLDAAMRHGVLVGGKRLRPVLLYATGRALGA 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A+E +H YSL+HDDLP+MD+ +RRG+PTVH YDE TAI+AG+ L T A Sbjct: 63 SDEALDGPAMAVELVHAYSLVHDDLPAMDDDDVRRGRPTVHRAYDEATAILAGDALQTLA 122 Query: 128 FEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQK 182 FE+++ P+ + ++ +L G GM GQ LD+ D T + + + Sbjct: 123 FEVLADTGHPRL-------AAMVGTLARAAGRDGMAAGQALDLDAVGGHPDLTALATMHR 175 Query: 183 MKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ A G ++A +E+ L + +G+ FQ+ DD+LD D Sbjct: 176 HKTGALIHAAVRLGGLVAVPEDDERLLALERYAAAIGLAFQIRDDVLDVTGD 227 >gi|295084865|emb|CBK66388.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens XB1A] Length = 324 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 112/200 (56%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L+ +L+ + + AIE H ++L+HDDL MD Sbjct: 27 LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPTVH +++ TA+++G+ +L AF ++ P+ LK+ + + SLT Sbjct: 85 SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQEHLKEVMD---LFSLT----T 137 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ LD++ E + E + + ++KT L+ + + GAI+A A+ + E L F Sbjct: 138 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASLKIGAILAGATAEDSENLYHF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G ++G+ FQL DDLLD D Sbjct: 198 GMHIGVAFQLQDDLLDVYGD 217 >gi|306830872|ref|ZP_07464034.1| geranyltranstransferase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426895|gb|EFM30005.1| geranyltranstransferase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 289 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 118/197 (59%), Gaps = 8/197 (4%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSM 95 L+ AI Y++ GGK+IR + E F + LT V AA+E IH SLIHDDLP+M Sbjct: 25 LIEAILYSVEAGGKRIRPLIFLEILEGFGI-ELTEGHFDVAAALEMIHTGSLIHDDLPAM 83 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ RRG+ T H ++DE TAI+AG+ L F ++++ L + + +L+ L+ G Sbjct: 84 DDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFGLVAN--AALSADTKVRLIAELSQASG 141 Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+GGQMLD++ E ++ +++ MI KTG L+ F + I+A+ + ++ + LR Sbjct: 142 TYGMVGGQMLDMKGEERKLNLSELQMIHANKTGKLLTFPVVAAGIVANLAADDLKSLREA 201 Query: 214 GENLGIIFQLADDLLDC 230 G +G+ FQ+ DD+LD Sbjct: 202 GSLVGLAFQVRDDILDV 218 >gi|325286587|ref|YP_004262377.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489] gi|324322041|gb|ADY29506.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489] Length = 324 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 13/202 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK++R L A +F + A+ A+E H +SL+HDD+ MD+ Sbjct: 27 LYEPINYILQLGGKRLRPILALMTADVFETDFKKAIPAAMAVEVFHNFSLVHDDI--MDD 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGK TVH ++D T I++G+ +L A+ ++ D + + + L LQ Sbjct: 85 APLRRGKATVHEKWDINTGILSGDAMLIEAYRLLEQ-----YDGEQYKKLNVLFSTTALQ 139 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ D+ E D+ + KM KT L+ A + GAI+A + ++ + FG Sbjct: 140 -VCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVAAAMKMGAIIAETTVENEDLIYDFG 198 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 +NLGI FQL DD LD D PK Sbjct: 199 KNLGIAFQLQDDYLDAFGD-PK 219 >gi|312874544|ref|ZP_07734569.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b] gi|315653403|ref|ZP_07906325.1| geranyltranstransferase [Lactobacillus iners ATCC 55195] gi|311089935|gb|EFQ48354.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b] gi|315489328|gb|EFU78968.1| geranyltranstransferase [Lactobacillus iners ATCC 55195] Length = 288 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 109/209 (52%), Gaps = 28/209 (13%) Query: 36 NDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90 ND S I Y++L GGK++R L A+L ++H + +++ IE IH YSLIHD Sbjct: 27 NDHKFSEIMSYSVLAGGKRLRPLLF--LATLEILSHPISEKEIKIACGIELIHTYSLIHD 84 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP+MDN RRGK T H ++ E AI+AG+ LL + I+ +L+ + Sbjct: 85 DLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSY------ELIKVI 138 Query: 151 THNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 T IG GM GGQ +DI + FID+ + +KTG L+ + + A A Sbjct: 139 TRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEF-----LKTGCLIVASVQMAAKYA 193 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229 +++ + L F E G +Q+ DD++D Sbjct: 194 NSNDKVQMNLLHFAEAFGRAYQIYDDIVD 222 >gi|298479711|ref|ZP_06997911.1| polyprenyl synthetase [Bacteroides sp. D22] gi|298274101|gb|EFI15662.1| polyprenyl synthetase [Bacteroides sp. D22] Length = 324 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 112/200 (56%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L+ +L+ + + AIE H ++L+HDDL MD Sbjct: 27 LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPTVH +++ TA+++G+ +L AF ++ P+ LK+ + + SLT Sbjct: 85 SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQEHLKEVMD---LFSLT----T 137 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ LD++ E + E + + ++KT L+ + + GAI+A A+ + E L F Sbjct: 138 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASLKIGAILAGATAEDAENLYHF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G ++G+ FQL DDLLD D Sbjct: 198 GMHIGVAFQLQDDLLDVYGD 217 >gi|182418006|ref|ZP_02949312.1| geranyltranstransferase [Clostridium butyricum 5521] gi|237668434|ref|ZP_04528418.1| putative geranyltranstransferase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378177|gb|EDT75712.1| geranyltranstransferase [Clostridium butyricum 5521] gi|237656782|gb|EEP54338.1| putative geranyltranstransferase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 288 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 118/203 (58%), Gaps = 6/203 (2%) Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 +N + A Y++ +GGK+IR L ++ + L + +IE IH YSLIHDDLP Sbjct: 23 YNKVIYDASGYSINIGGKRIRPILFALSYYIYKNEYKNILPMACSIEMIHTYSLIHDDLP 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTH 152 MD+ +RRGKPT H + E A++AG+ LL A +I LK+ S + + Sbjct: 83 CMDDDDLRRGKPTNHKVFGENIAVLAGDNLLNEA--MILMMDYSLKNGGNSLKAAYEIAS 140 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 + G +GM+GGQ++D+ E I + ++ + KTGAL+ + GA++A A +++ + L Sbjct: 141 SAGAEGMIGGQVVDVISEGKKISKDELEYMHAKKTGALIRASIVGGAVLAGACESDVKIL 200 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 R +GE LG++FQ+ DD+LD D Sbjct: 201 RTYGEKLGLVFQIKDDILDVVGD 223 >gi|237713977|ref|ZP_04544458.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262407029|ref|ZP_06083578.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646605|ref|ZP_06724237.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a] gi|294809763|ref|ZP_06768447.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b] gi|229445801|gb|EEO51592.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355732|gb|EEZ04823.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638047|gb|EFF56433.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a] gi|294443003|gb|EFG11786.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b] Length = 324 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 112/200 (56%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L+ +L+ + + AIE H ++L+HDDL MD Sbjct: 27 LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPTVH +++ TA+++G+ +L AF ++ P+ LK+ + + SLT Sbjct: 85 SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQEHLKEVMD---LFSLT----T 137 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ LD++ E + E + + ++KT L+ + + GAI+A A+ + E L F Sbjct: 138 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASLKIGAILAGATAEDAENLYHF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G ++G+ FQL DDLLD D Sbjct: 198 GMHIGVAFQLQDDLLDVYGD 217 >gi|18977474|ref|NP_578831.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638] gi|18893173|gb|AAL81226.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638] Length = 340 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 121/242 (50%), Gaps = 18/242 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M L K++E +K +D L L+ + + + +A Y L GGK++R F+V Sbjct: 1 MYDELFKKIKEKAKFVDEKLLSLIPEKEPKILYE------AARHYPLAGGKRVRPFVVLT 54 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A+ AIE IH YSL+HDD+ MD RRG+PTVH + AI+AG Sbjct: 55 ATEAVGGEWEKAIYPAVAIELIHNYSLVHDDIMDMDE--TRRGRPTVHKVWGINMAILAG 112 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + L + AFE IS + ++ +++++ ++ + GQ +D++ E D + Sbjct: 113 DLLFSKAFEAIS--RAEIPPEKKARVLETVVK--ASNELCEGQAMDLEFEKRDTVTIEEY 168 Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234 +M KTGAL + + G I+ ++ L +G N+GI FQ+ DD+LD EE L Sbjct: 169 MRMISGKTGALFDASAKVGGIVGTDNEEYINALSTWGRNVGIAFQIWDDVLDLIADEEKL 228 Query: 235 PK 236 K Sbjct: 229 GK 230 >gi|317503704|ref|ZP_07961721.1| geranyltranstransferase [Prevotella salivae DSM 15606] gi|315665225|gb|EFV04875.1| geranyltranstransferase [Prevotella salivae DSM 15606] Length = 323 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 78/227 (34%), Positives = 121/227 (53%), Gaps = 23/227 (10%) Query: 21 DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D+LL++ + DR L ++Y L +GGK+IR L+ LF + + L Sbjct: 4 DELLVKVNDFLSKLRYDRKPSGLYDPVKYVLSMGGKRIRPVLMLLAYGLFKDDVESILMP 63 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 +E H Y+L+HDDL MDN +RRG TVH +++ TAI++G+ +L A+E I+ Sbjct: 64 ACGLETYHNYTLLHDDL--MDNAEMRRGHETVHRKWNANTAILSGDSMLVLAYERIAQC- 120 Query: 136 TQLKDNIRSQLMLS-LTHNIGLQGM-LG-GQMLDIQDEF---IDETQVFMIQKMKTGALM 189 SQ+ LS + H + +G GQ D+ E + E + + ++KT L+ Sbjct: 121 --------SQIYLSDVLHTFTETALEIGEGQQYDMDFETRNDVTEAEYIEMIRLKTSVLL 172 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + GAI+A AS+ +++ L FGE +G+ FQL DD LD D PK Sbjct: 173 ACALKIGAILAGASKQDQDYLYKFGEQIGLAFQLQDDYLDVYGD-PK 218 >gi|14590908|ref|NP_142981.1| geranylgeranyl pyrophosphate synthetase [Pyrococcus horikoshii OT3] gi|90108478|pdb|1WY0|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthetase From Pyrococcus Horikoshii Ot3 gi|3257488|dbj|BAA30171.1| 342aa long hypothetical geranylgeranyl pyrophosphate synthetase [Pyrococcus horikoshii OT3] Length = 342 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 119/230 (51%), Gaps = 23/230 (10%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLL--SAIRYALLGGKKIRSFLVTECASL 64 ++++E +K ID + +L+ + + R+L +A Y L GGK++R F+V Sbjct: 9 ARIKEKAKLIDEKIFELI--------PEKDPRVLYEAARHYPLAGGKRVRPFVVLTSTEA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + L A+ AIE IH YSL+HDD+ MD RRGKPTVH + AI+AG+ L Sbjct: 61 VGGDPLRAIYPAVAIELIHNYSLVHDDIMDMDE--TRRGKPTVHRIWGVNMAILAGDLLF 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183 + AFE ++ + + R ++ N + GQ D+ EF ++ V + + M Sbjct: 119 SKAFEAVARAEIPPEKKARVLEVIVKASN----ELCEGQARDL--EFEKKSTVTIEEYME 172 Query: 184 ----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL + + G I+ ++ + L +G N+GI FQ+ DD+LD Sbjct: 173 MISGKTGALFEASAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLD 222 >gi|296110654|ref|YP_003621035.1| geranyltranstransferase [Leuconostoc kimchii IMSNU 11154] gi|295832185|gb|ADG40066.1| geranyltranstransferase [Leuconostoc kimchii IMSNU 11154] Length = 306 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 115/204 (56%), Gaps = 28/204 (13%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++YA+L GGK++R L + F + L+ A+E +H YSL+HDDLP+MDN + Sbjct: 36 MKYAVLNGGKRLRPMLSLAAMACFGQKITPSFLKAATAVEWVHSYSLVHDDLPAMDNDLV 95 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQ- 157 RRGKP+VH Q+ E AI+ G+ LLT AF ++++ + ++ I + +L L+ + +Q Sbjct: 96 RRGKPSVHAQFGEAEAILVGDALLTGAFHVLATANDSVVEDEMISAVELLKLSQILSVQS 155 Query: 158 ---GMLGGQMLDI----QDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHA---S 203 GM+ GQ+ D+ + IDET +V+M KTGAL+ F+ +G +++ Sbjct: 156 GSLGMVIGQVHDMYNHGKQSKIDETWLIDEVYMP---KTGALLGFSALAGTRLSNQQDID 212 Query: 204 QNEKER------LRCFGENLGIIF 221 Q ++R + FG + GI F Sbjct: 213 QIGQDRFDTNLAMLTFGYDFGIAF 236 >gi|262282720|ref|ZP_06060488.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA] gi|262262011|gb|EEY80709.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA] Length = 291 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 12/225 (5%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 +E ++ID + D + A +D L+ +I Y++ GGK+IR L+ E F + Sbjct: 4 EEKIRQIDQTIIDYYSKKAV------SDSLVESILYSVQAGGKRIRPLLLLELVEAFGLP 57 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +A +V +A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 58 LQSAHFQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDSLFLDP 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +I+ +L ++ L++ L+ G GM+GGQ LD++ E +D ++ I KT Sbjct: 118 YGLIAV--AELPSQVKVNLIMELSQAAGTFGMVGGQALDMEGEGCQLDLKELQAIHAHKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 G L+ F + ++ + + +LR GE +G+ FQ+ DD+LD Sbjct: 176 GKLLAFPFVAAGLLVQVEEGVQAKLRKIGELIGLAFQVRDDILDV 220 >gi|62959227|gb|AAY23721.1| farnesyl diphosphate synthase [Microbulbifer sp. JL-463] Length = 142 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 88/145 (60%), Gaps = 5/145 (3%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLPSMD+ +RRGKPT H+ Y E TAI+ G+ L AFE ++ T + + L Sbjct: 1 HDDLPSMDDDSLRRGKPTCHVAYGEATAILVGDALQCSAFEALA---TLSEPEFVAPLTR 57 Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 +L G +GM+ GQ LDI+ E ++E Q+ + ++KTGAL+ + A++A+ +++E Sbjct: 58 ALARASGSRGMILGQTLDIEAEGSLLNEHQLEQMHRLKTGALIDASVAMPALLANVTKDE 117 Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231 L + LG+ FQ+ DD+LD E Sbjct: 118 VSALTKYSRALGLAFQIQDDILDVE 142 >gi|281423539|ref|ZP_06254452.1| polyprenyl synthetase [Prevotella oris F0302] gi|281402359|gb|EFB33190.1| polyprenyl synthetase [Prevotella oris F0302] Length = 323 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 19/225 (8%) Query: 21 DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 ++LL++ + DR L ++Y L +GGK+IR L+ LF + + L Sbjct: 4 EELLVKVNDFLDNLKYDRKPSGLYDPVKYVLSMGGKRIRPVLMLLSYGLFKDDVESVLMP 63 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134 A+E H Y+L+HDDL MDN +RRG TVH ++D TAI++G+ +L A+E ++ Sbjct: 64 ACALETYHNYTLLHDDL--MDNADMRRGHETVHRKWDANTAILSGDSMLVLAYERMAKCN 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191 L D + + +L IG GQ D++ E + E + + ++KT L+ Sbjct: 122 PVYLSDVLHTFTETAL--EIG-----EGQQYDMEFETRNDVTEDEYIEMIRLKTSVLLAC 174 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + GAI+A AS+ +++ L FGE +G+ FQL DD LD D PK Sbjct: 175 AQKIGAILAGASKQDQDNLYKFGEQIGLAFQLQDDYLDVYGD-PK 218 >gi|126734161|ref|ZP_01749908.1| Geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2] gi|126717027|gb|EBA13891.1| Geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2] Length = 283 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 13/200 (6%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSM 95 +L +A+ YA+ GG +IR ++T A + G A+E IHC SL+HDDLP Sbjct: 16 KLAAALEYAVTPGGARIRPTILTSVAMACGDDRPELTNAAGVALEVIHCASLVHDDLPCF 75 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRGKP VH Y E A++AG+ L+ F+I++ + + D +L+ L G Sbjct: 76 DDADMRRGKPAVHRAYSEPLAVLAGDSLIIMGFQILARAASDMPDRAL-RLIDILGTRTG 134 Query: 156 LQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + G+ GQ + +D+ + + KTGAL A + GA+ A+ E E G Sbjct: 135 MPFGICAGQGWESEDQI----DLSAYHQAKTGALFIAATQMGAV---AAGQEAEPWEELG 187 Query: 215 ENLGIIFQLADDLLD--CEE 232 +G FQ+ADDL D C+E Sbjct: 188 ARIGEAFQVADDLRDALCDE 207 >gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera] Length = 1187 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 10/239 (4%) Query: 6 PSKLQENSKR--IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTEC 61 PSK + R T++ ++ + + ++ ++ A+RY++L GGK+ + Sbjct: 299 PSKSMQFDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAV 358 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 LF + L A A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG+ Sbjct: 359 CELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGD 418 Query: 122 GLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 L F I S P + + +++ + ++G GM GQ LD++ V Sbjct: 419 ALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGA---PNSVDF 475 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD-LLDCEEDLPKK 237 +Q+ K G + + G + A+ ++ RLR +G +G+++Q+ DD ++ E+L K Sbjct: 476 VQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDKAMEVAEELRAK 534 >gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp. lyrata] gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp. lyrata] Length = 337 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 9/197 (4%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY LL GGK++R L L TA+ A+E IH SLI DDLP MD+ + Sbjct: 71 AMRYTLLSGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHASSLILDDLPCMDDDSL 130 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRGKPT H + E TAI+A N L++ A E ++S + + + + +G++G+ Sbjct: 131 RRGKPTNHKVFGEKTAILAANALMSLAVEQTLASTSLGVTSERVLRAVQEMARAVGIEGL 190 Query: 160 LGGQMLDIQD-----EFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 + GQ D+ E DE ++ I KT L+ A GAIM S E ERL+ Sbjct: 191 VAGQAADLAGGRMSFETEDEGLRYLEFIHIHKTAVLVEAAAVVGAIMGGGSDEEIERLKS 250 Query: 213 FGENLGIIFQLADDLLD 229 + +G++FQ+ DD+LD Sbjct: 251 YARCVGLMFQVMDDVLD 267 >gi|329765808|ref|ZP_08257374.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137651|gb|EGG41921.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 326 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 22/190 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++V + + N TA+ +A+E IH ++L+HDD+ MDN +R G PTVH Sbjct: 40 GGKRLRPYMVIKSCQILGGNTATAMPAASAVEMIHNFTLVHDDI--MDNDEMRHGVPTVH 97 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 ++ AI+AG+ L + A++IIS ++ + + QL+ L + GQ+LD+ Sbjct: 98 KKFGMPIAILAGDVLFSKAYQIIS--ESNISKDSTVQLVSRLAK--ACVDVCEGQLLDVK 153 Query: 168 ---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 Q E+I MI K KT AL +C GAI A +Q + L FG+NLG Sbjct: 154 MAEGKRIPTQKEYI-----AMIGK-KTAALFDVSCSMGAICATNNQKDILNLSNFGKNLG 207 Query: 219 IIFQLADDLL 228 I FQ+ DDL+ Sbjct: 208 IAFQITDDLI 217 >gi|262382413|ref|ZP_06075550.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295291|gb|EEY83222.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 324 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L +++N + A++ +E H ++L+HDDL MD Sbjct: 27 LYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPALGLEVFHNFTLLHDDL--MDE 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156 RR KPTVH ++ TAI++G+ +L A+++I S + LK Q++ T Sbjct: 85 ADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHLK-----QVLDLFTQTAA- 138 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GGQ D++ E + E + + ++KT L+ + ++GA++ ASQ + L F Sbjct: 139 -EICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLACSLKTGALLGGASQEDASNLYAF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G N+G+ FQL DDLLD D Sbjct: 198 GINIGLAFQLQDDLLDVYGD 217 >gi|62959217|gb|AAY23716.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP839] Length = 145 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 87/146 (59%), Gaps = 4/146 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP MDN +RRG+PT HI +DE TAI+AG+ L T AF ++ L D +R ++ Sbjct: 1 HDDLPGMDNDDLRRGRPTAHIAFDEATAILAGDALQTLAFGWLAEAPG-LDDQVRLAMVR 59 Query: 149 SLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQN 205 L G QGM GGQ +D++ + + Q+ + + KTGAL+ + GA+ A +++ Sbjct: 60 ELATASGHQGMAGGQAIDLESVGKQLTVEQLENMHRHKTGALIAASVRMGALTATEVNED 119 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 + L + + LG+ FQ+ DD+LD E Sbjct: 120 QLAALTVYSQTLGLAFQVHDDILDVE 145 >gi|260654971|ref|ZP_05860459.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1] gi|260630286|gb|EEX48480.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1] Length = 280 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 103/200 (51%), Gaps = 10/200 (5%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A+ Y+L GGK+IR L E A L V + A+E +H SLIHDDLP MD Sbjct: 15 RLWEAMCYSLEAGGKRIRPVLCQEGARLAGVKAEDTFPMALALEMVHTASLIHDDLPCMD 74 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF----EIISSPKTQLKDNIRSQLMLSLTH 152 N +RRGKPT H + E A++AG+ LL + F E + + K + K +R+ M Sbjct: 75 NDSLRRGKPTNHSVFGESLALLAGDALLCFGFQTALEGLKARKIETKRVVRA--MELFAS 132 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF-ACE--SGAIMAHASQNEKER 209 +G QGM GGQ LD + + +Q M +G M C G + ER Sbjct: 133 ALGPQGMCGGQTLDTDLQSRASCDLPFVQSMASGKTMALIRCSVLCGLCLGERGDALTER 192 Query: 210 LRCFGENLGIIFQLADDLLD 229 L +G LG+ FQ+ADDLLD Sbjct: 193 LDEYGRRLGLAFQIADDLLD 212 >gi|256839153|ref|ZP_05544663.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256740072|gb|EEU53396.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 324 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 110/200 (55%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L +++N + A++ +E H ++L+HDDL MD Sbjct: 27 LYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPALGLEVFHNFTLLHDDL--MDE 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156 RR KPTVH ++ TAI++G+ +L A+++I S + LK Q++ T Sbjct: 85 ADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHLK-----QVLDLFTQTAA- 138 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GGQ D++ E ++E + + ++KT L+ + ++GA++ ASQ + L F Sbjct: 139 -EICGGQQFDMEFESRMDVNEEEYIEMIRLKTAVLLACSLKTGALLGGASQEDAGNLYAF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G N+G+ FQL DDLLD D Sbjct: 198 GINIGLAFQLQDDLLDVYGD 217 >gi|170016839|ref|YP_001727758.1| geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20] gi|169803696|gb|ACA82314.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20] Length = 304 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 60/166 (36%), Positives = 97/166 (58%), Gaps = 14/166 (8%) Query: 45 YALL-GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 YA+L GGK++R L S FNV+ L++ A+E +H YSL+HDDLP+MDN RR Sbjct: 38 YAVLNGGKRLRPLLTLAVLSSFNVSVTPNLLKLATAVEWVHSYSLVHDDLPAMDNDLWRR 97 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT------QLKDNIRSQLMLSLTHNIGL 156 G+P+VH ++ E +AI+ G+ LLT AF+++S ++ D ++ L+ G Sbjct: 98 GQPSVHAKFGESSAILVGDALLTGAFQVVSEANALAANVQKVSDEQVITIIRQLSRYAGA 157 Query: 157 QGMLGGQMLDIQD---EFIDETQVFMIQKM---KTGALMCFACESG 196 GM+ GQ+ D+Q+ + D T +++ + KT AL+ +A + G Sbjct: 158 NGMVIGQIHDMQNHGHQKSDVTYDWLLNDVYAPKTAALISYATDIG 203 >gi|86134740|ref|ZP_01053322.1| polyprenyl synthetase [Polaribacter sp. MED152] gi|85821603|gb|EAQ42750.1| polyprenyl synthetase [Polaribacter sp. MED152] Length = 323 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 14/210 (6%) Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L++ +Q N L + Y L LGGK+IR L A +F ++ AL A+E H Sbjct: 14 LESKDWVQEPKN--LYEPVDYILKLGGKRIRPVLTLMAADIFGADYNKALPAALAVEVFH 71 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 ++L+HDD+ MD+ +RRGK TVH ++D TAI++G+ +L A++ + K ++ Sbjct: 72 NFTLVHDDI--MDDAPLRRGKATVHEKWDINTAILSGDAMLILAYKYFENYKPEV----- 124 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMA 200 Q + L L+ + GQ LD+ E + + M KT L+ A + GAI+A Sbjct: 125 FQKLAKLFSKTALE-VCDGQQLDVDFETRKKVTIDEYLNMICLKTSVLVAAALKMGAIVA 183 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230 + + + FG NLG+ FQL DD LD Sbjct: 184 ESDDKNADLIYDFGLNLGLAFQLQDDYLDT 213 >gi|260174038|ref|ZP_05760450.1| putative isoprenyl synthetase [Bacteroides sp. D2] gi|315922307|ref|ZP_07918547.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696182|gb|EFS33017.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 324 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L+ +L+ + + AIE H ++L+HDDL MD Sbjct: 27 LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPTVH +++ TA+++G+ +L AF ++ P LK+ + + SLT Sbjct: 85 SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLKEVMD---LFSLT----T 137 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ LD++ E + E + + ++KT L+ + + GAI+A A+ + E L F Sbjct: 138 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G ++G+ FQL DDLLD D Sbjct: 198 GMHIGVAFQLQDDLLDVYGD 217 >gi|4490594|emb|CAB38744.1| geranylgeranyl pyrophosphate synthase [Rhodobacter sphaeroides] Length = 288 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 13/202 (6%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIH 89 ++ +L +A+ YA+ GG +IR L+ A+ + AL AA+ E IHC SL+H Sbjct: 21 SEAPSKLATALDYAVTPGGARIRPTLLLSVATRCG-DSRPALSDAAAVALELIHCASLVH 79 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP D+ IRRGKPTVH Y E AI+ G+ L+ FE+++ + QL+ + Sbjct: 80 DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLAGAAAD-RPQRALQLVTA 138 Query: 150 LTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 L G+ G+ GQ + + + + + KTGAL A + GAI A+ E E Sbjct: 139 LAVRTGMPMGICAGQGWESESQI----NLSAYHRAKTGALFIAATQMGAI---AAGYEAE 191 Query: 209 RLRCFGENLGIIFQLADDLLDC 230 G +G FQ+ADDL D Sbjct: 192 PWEELGARIGEAFQVADDLRDA 213 >gi|237720117|ref|ZP_04550598.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229450669|gb|EEO56460.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 324 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L+ +L+ + + AIE H ++L+HDDL MD Sbjct: 27 LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPTVH +++ TA+++G+ +L AF ++ P LK+ + + SLT Sbjct: 85 SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLKEVMD---LFSLT----T 137 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ LD++ E + E + + ++KT L+ + + GAI+A A+ + E L F Sbjct: 138 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G ++G+ FQL DDLLD D Sbjct: 198 GMHIGVAFQLQDDLLDVYGD 217 >gi|317132180|ref|YP_004091494.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3] gi|315470159|gb|ADU26763.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3] Length = 296 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 83/233 (35%), Positives = 126/233 (54%), Gaps = 22/233 (9%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66 ++++ +KR++ L+ L TA Q RL A+RY A+ GGK++R LV E + Sbjct: 6 RIEDIAKRVNEALNRFL-PTAEGPQ----KRLFEAMRYSAMAGGKRVRPMLVLEFCRMCG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 AL A+E IH YSLIHDDLP MD+ RRG+P+ H+QYDE TA++AG+ LL+ Sbjct: 61 GKEEQALPFACAVEMIHTYSLIHDDLPCMDDDDFRRGRPSCHVQYDEATALLAGDALLSL 120 Query: 127 AFEIISSPKTQLKDNIRSQLML-SLTHNIGLQGMLGGQMLDIQDEFID---ETQ------ 176 AFE T L +N++S ++ + +GL G + + ID E Q Sbjct: 121 AFE------TGLCNNMQSGVLAQNALRAMGLLAKASGGQGMVGGQMIDLLSEGQHIPLEL 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + + KTGA++ A G I+A A + + + LG+ FQ+ DD+LD Sbjct: 175 LETMHRGKTGAMIRAAAAGGCILAGADETRVQAADAYAAKLGLAFQIVDDILD 227 >gi|157150564|ref|YP_001449997.1| geranyltranstransferase [Streptococcus gordonii str. Challis substr. CH1] gi|157075358|gb|ABV10041.1| geranyltranstransferase [Streptococcus gordonii str. Challis substr. CH1] Length = 291 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 124/225 (55%), Gaps = 12/225 (5%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 +E ++ID + D Q A +D L+ +I Y++ GGK+IR L+ E F++ Sbjct: 4 EEKIRQIDQTIIDYYSQQAV------SDSLVESILYSVQAGGKRIRPLLLLELVEAFDLP 57 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 58 LQPAHFQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDSLFLDP 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 +I+ +L + L++ L+ G GM+GGQ LD++ E +D ++ I KT Sbjct: 118 CGLIAV--AELPSQAKVNLIMELSQAAGTFGMVGGQALDMEGEGCQLDLKELKAIHAHKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 G L+ F + ++A + + +LR GE +G+ FQ+ DD+LD Sbjct: 176 GKLLAFPFVAAGLLAQVDEGVQAKLRRIGELIGLAFQVRDDILDV 220 >gi|283850298|ref|ZP_06367587.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B] gi|283574324|gb|EFC22295.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B] Length = 299 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 112/197 (56%), Gaps = 4/197 (2%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + LL+A+ Y+LL GGK++R L A LF A+ A E IH YSLIHDDLP+M Sbjct: 33 ESLLAAMEYSLLAGGKRLRPALCLSFAELFGAARARAMPFAAGFEIIHTYSLIHDDLPAM 92 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRG+P+ H + E AI+AG+GLLT AF + + ++ + G Sbjct: 93 DDDDLRRGRPSNHKVFGEAAAILAGDGLLTEAFGCMGRAWPGIAADLVLPALAEAARAAG 152 Query: 156 LQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GM GGQ LD+ + + ++ +Q +KTGAL+ +C GAI+A A + R R Sbjct: 153 AAGMGGGQALDMDYTARQGVTLAELARMQALKTGALITASCVCGAILAGAGEEGVARARE 212 Query: 213 FGENLGIIFQLADDLLD 229 +GE +G FQ+ DD+LD Sbjct: 213 YGEAVGAAFQIVDDILD 229 >gi|221639691|ref|YP_002525953.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter sphaeroides KD131] gi|332558710|ref|ZP_08413032.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter sphaeroides WS8N] gi|221160472|gb|ACM01452.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter sphaeroides KD131] gi|332276422|gb|EGJ21737.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter sphaeroides WS8N] Length = 278 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 15/202 (7%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIH 89 ++ +L +A+ YA+ GG +IR L+ A+ + AL AA+ E IHC SL+H Sbjct: 11 SEAPSKLATALDYAVTPGGARIRPTLLLSVATACG-DDRPALSDAAAVALELIHCASLVH 69 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLML 148 DDLP D+ IRRGKPTVH Y E AI+ G+ L+ FE+++ + R+ QL+ Sbjct: 70 DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLA--RAAADQPQRALQLVT 127 Query: 149 SLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +L G+ G+ GQ + + + + + KTGAL A + GAI A+ E Sbjct: 128 ALAVRTGMPMGICAGQGWESESQI----NLSAYHRAKTGALFIAATQMGAI---AAGYEA 180 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 E G +G FQ+ADDL D Sbjct: 181 EPWEELGARIGEAFQVADDLRD 202 >gi|225432262|ref|XP_002275812.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 361 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 6/194 (3%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK+I + L TA+ V A+E +H SL+ DDLP MDN I Sbjct: 98 AMRYSLLDGGKRIHPIVCISACELVGGQESTAMPVVCAVEMLHVVSLMQDDLPCMDNDDI 157 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQG 158 RRGKP+ H + E I+A + LL AFE +++ T + + + L +IG QG Sbjct: 158 RRGKPSNHKAFGESVTILAVDALLALAFEHVATMSTVGVVPPMVTVHAIQELARSIGSQG 217 Query: 159 MLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGE 215 ++ GQ LD+ E E + ++ + K G L+ + GA++ S + E LR FG Sbjct: 218 LVAGQFLDLSSEGSPEIGLEGLESIHINKAGPLLEASAVIGAMLGGGSSEQMEILRKFGR 277 Query: 216 NLGIIFQLADDLLD 229 +G+++Q+ DD+LD Sbjct: 278 CVGLLYQVVDDILD 291 >gi|62959215|gb|AAY23715.1| farnesyl diphosphate synthase [Synechococcus sp. WH 6501] Length = 145 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 4/146 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+P MDN +RRG+PT HI +DE TAI+AG+ L T AF ++ L D +R ++ Sbjct: 1 HDDMPGMDNDDLRRGRPTAHIAFDEATAILAGDALQTLAFGWLAEAPG-LDDQVRLAMVR 59 Query: 149 SLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQN 205 L G QGM GGQ +D++ + + Q+ + + KTGAL+ + GA+ A +++ Sbjct: 60 ELATASGHQGMAGGQAIDLESVGKQLTVEQLENMHRHKTGALIAASVRMGALTATEVNED 119 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 + L + + LG+ FQ+ DD+LD E Sbjct: 120 QLAALTVYSQTLGLAFQVQDDILDVE 145 >gi|126462671|ref|YP_001043785.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17029] gi|126104335|gb|ABN77013.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17029] Length = 292 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 15/203 (7%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIH 89 ++ +L +A+ YA+ GG +IR L+ A+ + AL AA+ E IHC SL+H Sbjct: 25 SEAPSKLATALDYAVTPGGARIRPTLLLSVATACG-DDRPALSDAAAVALELIHCASLVH 83 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLML 148 DDLP D+ IRRGKPTVH Y E AI+ G+ L+ FE+++ + R+ QL+ Sbjct: 84 DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLA--RAAADQPQRALQLVT 141 Query: 149 SLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +L G+ G+ GQ + + + + + KTGAL A + GAI A+ E Sbjct: 142 ALAVRTGMPMGICAGQGWESESQI----NLSAYHRAKTGALFIAATQMGAI---AAGYEA 194 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 E G +G FQ+ADDL D Sbjct: 195 EPWEELGARIGEAFQVADDLRDA 217 >gi|77463836|ref|YP_353340.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1] gi|85683255|sp|P54976|CRTE_RHOS4 RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; AltName: Full=Farnesyltranstransferase gi|77388254|gb|ABA79439.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1] Length = 288 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 15/203 (7%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIH 89 ++ +L +A+ YA+ GG +IR L+ A+ + AL AA+ E IHC SL+H Sbjct: 21 SEAPSKLATALDYAVTPGGARIRPTLLLSVATACG-DDRPALSDAAAVALELIHCASLVH 79 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLML 148 DDLP D+ IRRGKPTVH Y E AI+ G+ L+ FE+++ + R+ QL+ Sbjct: 80 DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLA--RAAADQPQRALQLVT 137 Query: 149 SLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +L G+ G+ GQ + + + + + KTGAL A + GAI A+ E Sbjct: 138 ALAVRTGMPMGICAGQGWESESQI----NLSAYHRAKTGALFIAATQMGAI---AAGYEA 190 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 E G +G FQ+ADDL D Sbjct: 191 EPWEELGARIGEAFQVADDLRDA 213 >gi|146278076|ref|YP_001168235.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145556317|gb|ABP70930.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025] Length = 288 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 25/212 (11%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIH 89 ++ +L SA+ YA+ GG +IR L+ A+ + AL AA+ E IHC SL+H Sbjct: 21 SEAPSKLASALDYAVTPGGARIRPTLLLSVATACG-DDRPALSDAAAVALELIHCASLVH 79 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRS 144 DDLP D+ IRRGKPT H Y E AI+ G+ L+ FE+++ P+ L Sbjct: 80 DDLPCFDDAEIRRGKPTTHRAYSEPLAILTGDSLIVMGFEVLARAAGDQPQRAL------ 133 Query: 145 QLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 QL+ +L G+ G+ GQ + + + + + KTGAL A + GAI A+ Sbjct: 134 QLVTALAVRTGMPMGICAGQGWESESQI----NLSAYHRAKTGALFIAATQMGAI---AA 186 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD--CEED 233 E E G +G FQ+ADDL D C+ D Sbjct: 187 GYEAEPWEELGARIGEAFQVADDLRDALCDAD 218 >gi|160882687|ref|ZP_02063690.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483] gi|299147995|ref|ZP_07041058.1| polyprenyl synthetase [Bacteroides sp. 3_1_23] gi|156111857|gb|EDO13602.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483] gi|298514178|gb|EFI38064.1| polyprenyl synthetase [Bacteroides sp. 3_1_23] Length = 342 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L+ +L+ + + AIE H ++L+HDDL MD Sbjct: 45 LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 102 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPTVH +++ TA+++G+ +L AF ++ P LK+ + + SLT Sbjct: 103 SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLKEVMD---LFSLT----T 155 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ LD++ E + E + + ++KT L+ + + GAI+A A+ + E L F Sbjct: 156 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNF 215 Query: 214 GENLGIIFQLADDLLDCEED 233 G ++G+ FQL DDLLD D Sbjct: 216 GMHIGVAFQLQDDLLDVYGD 235 >gi|150010302|ref|YP_001305045.1| putative isoprenoid biosynthesis related protein [Parabacteroides distasonis ATCC 8503] gi|255012432|ref|ZP_05284558.1| putative isoprenoid biosynthesis related protein [Bacteroides sp. 2_1_7] gi|298374699|ref|ZP_06984657.1| polyprenyl synthetase [Bacteroides sp. 3_1_19] gi|149938726|gb|ABR45423.1| putative isoprenoid biosynthesis related protein [Parabacteroides distasonis ATCC 8503] gi|298269067|gb|EFI10722.1| polyprenyl synthetase [Bacteroides sp. 3_1_19] Length = 324 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L +++N + A++ +E H ++L+HDDL MD Sbjct: 27 LYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPALGLEVFHNFTLLHDDL--MDE 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156 RR KPTVH ++ TAI++G+ +L A+++I S + LK Q++ T Sbjct: 85 ADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHLK-----QVLDLFTQTAA- 138 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GGQ D++ E + E + + ++KT L+ + ++GA++ ASQ + L F Sbjct: 139 -EICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLACSLKTGALLGGASQEDAGNLYAF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G N+G+ FQL DDLLD D Sbjct: 198 GINIGLAFQLQDDLLDVYGD 217 >gi|325977772|ref|YP_004287488.1| putative geranyltranstransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177700|emb|CBZ47744.1| putative geranyltranstransferase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 289 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 8/197 (4%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSM 95 L+ AI Y++ GGK+IR + E F + LT V AA+E IH SLIHDDLP+M Sbjct: 25 LIEAILYSVEAGGKRIRPLIFLEILEGFGI-ELTEGHFDVAAALEMIHTGSLIHDDLPAM 83 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ RRG+ T H ++DE TAI+AG+ L F ++++ L + + +L+ L+ G Sbjct: 84 DDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFGLVAN--AALSADTKVRLIAELSQASG 141 Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+GGQMLD++ E ++ +++ +I KTG L+ F + I+A+ + ++ + LR Sbjct: 142 TYGMVGGQMLDMKGEERKLNLSELQLIHANKTGKLLTFPVVAAGIVANLAADDLKSLREA 201 Query: 214 GENLGIIFQLADDLLDC 230 G +G+ FQ+ DD+LD Sbjct: 202 GSLVGLAFQVRDDILDV 218 >gi|293373955|ref|ZP_06620297.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f] gi|292631176|gb|EFF49812.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f] Length = 342 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L+ +L+ + + AIE H ++L+HDDL MD Sbjct: 45 LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 102 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPTVH +++ TA+++G+ +L AF ++ P LK+ + + SLT Sbjct: 103 SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLKEVMD---LFSLT----T 155 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ LD++ E + E + + ++KT L+ + + GAI+A A+ + E L F Sbjct: 156 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNF 215 Query: 214 GENLGIIFQLADDLLDCEED 233 G ++G+ FQL DDLLD D Sbjct: 216 GMHIGVAFQLQDDLLDVYGD 235 >gi|313148980|ref|ZP_07811173.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313137747|gb|EFR55107.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 324 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 112/199 (56%), Gaps = 12/199 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L ++Y L +GGK+IR L+ +L+ + + AIE H Y+L+HDDL MD Sbjct: 27 LYDPVKYVLSMGGKRIRPVLMLMAYNLYKEDVTSVYDPATAIEVYHNYTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGK TVH +++ TAI++G+ ++ A++ ++S ++ + + SLT L+ Sbjct: 85 ADMRRGKTTVHKVWNDNTAILSGDAMMVLAYQYMASCSSEYLKEVMD--LFSLT---ALE 139 Query: 158 GMLGGQM---LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G QM + +D+ +E + MI ++KT L+ + + GAI+ AS+ + E L FG Sbjct: 140 ICEGQQMDMGFESRDDVKEEEYLEMI-RLKTAVLLAASLKIGAILGGASREDAENLYDFG 198 Query: 215 ENLGIIFQLADDLLDCEED 233 +G+ FQL DDLLD D Sbjct: 199 MQIGVAFQLQDDLLDVYGD 217 >gi|330834019|ref|YP_004408747.1| geranyltranstransferase [Metallosphaera cuprina Ar-4] gi|329566158|gb|AEB94263.1| geranyltranstransferase [Metallosphaera cuprina Ar-4] Length = 327 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 8/199 (4%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A RY L GGK++R +V + L + A+ GAAIE +H ++LIHDD+ MD Sbjct: 29 LYEASRYLLKAGGKRLRPLMVVLSSELLGGSRDRAILAGAAIEVLHNFTLIHDDI--MDQ 86 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG PTVH+++ TAI+AG+ L AFE+I+ L ++ + + + +I + Sbjct: 87 DTTRRGLPTVHVKWGIPTAILAGDLLHAKAFELITESIKGLPIDLAYRALNCFSRSIVI- 145 Query: 158 GMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACES--GAIMAHASQNEKERLRCFG 214 + GQ +D++ + D T+ ++ ++ FAC + G ++A+ + E L FG Sbjct: 146 -VSEGQAMDMEFERRWDVTENLYLEMIRKKTAQLFACSAHLGGLLANGTNEEVNSLYDFG 204 Query: 215 ENLGIIFQLADDLLDCEED 233 E +GI FQ+ DD+L D Sbjct: 205 EKIGIAFQIMDDILGITAD 223 >gi|149369615|ref|ZP_01889467.1| putative isoprenoid biosynthesis related protein [unidentified eubacterium SCB49] gi|149357042|gb|EDM45597.1| putative isoprenoid biosynthesis related protein [unidentified eubacterium SCB49] Length = 324 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 11/186 (5%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 LGGK++R L A F A+ A+E H +SLIHDD+ MD+ +RRGK TV Sbjct: 37 LGGKRLRPVLTLMTAEFFGSTIEKAMNAALAVELFHNFSLIHDDI--MDDAPLRRGKVTV 94 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++D T I++G+ +L A+++ + + + Q + L L+ + GQ D+ Sbjct: 95 HEKWDLNTGILSGDAMLILAYQLFEGYEAE-----KFQQLAKLFSKTALE-VCEGQQYDV 148 Query: 168 QDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E D+ + KM KT L+ A + GAI+A AS K+ + FG NLGI FQL Sbjct: 149 DFETRDDVTIPEYIKMIDFKTAVLIGAAMKMGAIVAEASDACKDNIYEFGRNLGIAFQLQ 208 Query: 225 DDLLDC 230 DD LD Sbjct: 209 DDYLDA 214 >gi|260461762|ref|ZP_05810008.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] gi|319785307|ref|YP_004144783.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032403|gb|EEW33668.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] gi|317171195|gb|ADV14733.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 332 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 120/223 (53%), Gaps = 18/223 (8%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 +Q+ +K ++ L LL + L++A+RYA L GGK+ R+ L +L + Sbjct: 37 MQDGAKGVEQALARLLCA-----EDDGETELMAAMRYATLHGGKRTRALLCLAAGALADT 91 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 VGAAIE IH +L+HDDLP+MDN +RRG PTVH+++ E TAI+ G+ L +A Sbjct: 92 PAHVLEDVGAAIEMIHACTLVHDDLPAMDNDVLRRGLPTVHVKFGEATAILVGDALQAHA 151 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185 F ++S DN R L+ L + +G GGQ D+ + ++ ++ + +MK+ Sbjct: 152 FLTLASLDAP-GDN-RIALVRELAQAVSAEGAAGGQAKDLSLVGKHVELDRIVAMHRMKS 209 Query: 186 GALMCFACESGAI------MAHAS-QNEKERLR-CFGENLGII 220 GAL+ + GA+ AHA+ + +R CFG L ++ Sbjct: 210 GALVRASVRMGALCAITEDAAHAALYSALDRYSACFGLALQVV 252 >gi|27362941|gb|AAN86974.1| multifunctional geranylgeranyl pyrophosphate synthase [Sulfolobus shibatae B12] Length = 331 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 118/223 (52%), Gaps = 11/223 (4%) Query: 13 SKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVN 68 S + + +D++ H++ + N R L + L GGK++R ++ + L + Sbjct: 2 SDELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGD 61 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG+ L AF Sbjct: 62 RQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAF 119 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGA 187 E ++ L N + ++I + + GQ +D+ E +D T+ +Q +K Sbjct: 120 EALNEALKGLDGNTFYKAFSVFINSIEI--ISEGQAMDMSFENRVDVTEEEYMQMIKGKT 177 Query: 188 LMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 M F+C + G I+ AS + + L +G NLGI FQ+ DD+L Sbjct: 178 AMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDIL 220 >gi|20089495|ref|NP_615570.1| bifunctional short chain isoprenyl diphosphate synthase [Methanosarcina acetivorans C2A] gi|19914402|gb|AAM04050.1| bifunctional short chain isoprenyl diphosphate synthase [Methanosarcina acetivorans C2A] Length = 324 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 120/230 (52%), Gaps = 19/230 (8%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L ++++ S +D +++LL T H + L A RY + GGK++R ++ A Sbjct: 6 LIDEIKKRSSHVDAAINELLPVT-------HPEELYKASRYLVDAGGKRLRPAVLILAAE 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + L A+E +H ++LIHDD+ DN IRRG P VH+++ E AI+AG+ L Sbjct: 59 AVGSDLKSVLPAAVAVELVHNFTLIHDDIMDKDN--IRRGMPAVHVKWGEAGAILAGDTL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFM 179 + AFEI+S + ++ +LS T + GQ LD+ +D + + M Sbjct: 117 YSKAFEILSKVENDPVRILKCMDVLSKT----CTEICEGQWLDMDFEKRDRVTELEYLEM 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++K KT L A + GA++ AS E L +G +GI FQ+ DD+LD Sbjct: 173 VEK-KTSVLYAAAAKIGALLGGASDEVAESLSEYGRLIGIGFQMYDDVLD 221 >gi|92112233|ref|YP_572161.1| farnesyl-diphosphate synthase [Chromohalobacter salexigens DSM 3043] gi|91795323|gb|ABE57462.1| farnesyl-diphosphate synthase [Chromohalobacter salexigens DSM 3043] Length = 285 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 10/198 (5%) Query: 41 SAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +A+RY++LGG K++R LV AA+E IH YSL+HDDLP+MD+ Sbjct: 28 AAMRYSVLGGGKRLRPILVYAAGHALGAEDKALDAPAAAVELIHAYSLVHDDLPAMDDDD 87 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQG 158 +RRG+PTVH Y E AI+AG+ L T AFE+++ + +L +R +L + G +G Sbjct: 88 MRRGRPTVHRAYSEAMAILAGDALQTLAFEVLAETRHPRLGAMVR-----ALANASGREG 142 Query: 159 MLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGE 215 M GQ LD+ +D + + KTGAL+ A GA+ A + + L + Sbjct: 143 MAAGQALDLSAVGGRLDVDALATMHGYKTGALIRAAVRLGALAAADEDDPRVAALDTYAA 202 Query: 216 NLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 203 AIGLAFQIQDDILDVAGD 220 >gi|53804815|ref|YP_113317.1| geranyltranstransferase [Methylococcus capsulatus str. Bath] gi|53758576|gb|AAU92867.1| geranyltranstransferase [Methylococcus capsulatus str. Bath] Length = 300 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/230 (34%), Positives = 123/230 (53%), Gaps = 10/230 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 ++ + +R++ LD L A M +RL A+RY++LGG K++R L V Sbjct: 11 MRSSQERVERALD-ARLPAADRMP----ERLHQAMRYSVLGGGKRMRPLLTYATGQTIGV 65 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+E IH YSLIHDDLP+MD+ +RRGKPT H YDE TAI+AG+GL A Sbjct: 66 AADLLDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKPTCHKAYDEATAILAGDGLQALA 125 Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMK 184 F +++ P + R ++ +L G GM+GGQ +D+ + +D + + K Sbjct: 126 FHVLAQDPSIAVPAENRIAMIETLAKASGPAGMVGGQAIDLASVGKKLDLPGLENMHIRK 185 Query: 185 TGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 TGAL+ + + E+ +RL + + +G+ FQ+ DD+LD E D Sbjct: 186 TGALIRASVRLACLARPGLPAEQFDRLDHYAKCIGLAFQIQDDILDEESD 235 >gi|50952782|gb|AAT90315.1| putative geranylgeranyl pyrophosphate synthetase [uncultured proteobacterium eBACred25D05] Length = 308 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 111/202 (54%), Gaps = 15/202 (7%) Query: 38 RLLSAIRYALL-GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +L AI+Y++ GG +IR + L++ + + N A AA+E IHC SL+HDDLP Sbjct: 45 KLDDAIQYSVFPGGARIRPTILLSVAVACGDDNPSLANASAAALEMIHCASLVHDDLPCF 104 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNI 154 DN RRGKP+VH +Y E TA++ G+ L+ AF +I+ + KD +R ++L+ L+ Sbjct: 105 DNAETRRGKPSVHNKYGEPTAVLVGDSLIANAFGVIA--RAADKDAVRAAKLIALLSKYT 162 Query: 155 GL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G +G+ GQ + + + + KTGAL A + GA A ++ E Sbjct: 163 GFPKGICAGQAWEAE----ISVDLSAYHQTKTGALFIAATQMGAASA---GHDPEPWFEL 215 Query: 214 GENLGIIFQLADDLLD--CEED 233 G +G FQ+ADDLLD C ED Sbjct: 216 GARIGEAFQVADDLLDVLCSED 237 >gi|326790848|ref|YP_004308669.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427] gi|326541612|gb|ADZ83471.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427] Length = 291 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 118/199 (59%), Gaps = 10/199 (5%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVT-ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L A+ Y+LL GGK+IR L+ ++ + A G IE IH YSLIHDDLP+ Sbjct: 28 ENLYKAMNYSLLAGGKRIRPVLMQLAYEAVGGKAEIDAYLCG--IEMIHTYSLIHDDLPA 85 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTH 152 MD+ RRGK T H + E TAI+AG+ LL AF ++ + K+ + +R+ +LS+ Sbjct: 86 MDDDDYRRGKLTNHKVFGEATAILAGDALLNDAFCLMLEDALKSDSMEKVRAIHVLSMAS 145 Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G GM+GGQ+LD++ E ID+ + +I KTGAL+ A + GAI+ S E L Sbjct: 146 --GSAGMIGGQILDMESENKAIDQDTLDLIHLNKTGALISAATKMGAILGGGSPREVSLL 203 Query: 211 RCFGENLGIIFQLADDLLD 229 +G+ +G +FQ+ DD+LD Sbjct: 204 EAYGKYIGKVFQIVDDILD 222 >gi|282882106|ref|ZP_06290747.1| geranyltranstransferase [Peptoniphilus lacrimalis 315-B] gi|281298136|gb|EFA90591.1| geranyltranstransferase [Peptoniphilus lacrimalis 315-B] Length = 289 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 13/236 (5%) Query: 11 ENSKRIDTI---LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL--VTECASL 64 +N + ++TI LD L T +++ + ++ +++Y+L GGK+IR L +T Sbjct: 2 KNLEELNTIIGELDSYLSNTFTYVD-ESLAKIYESMKYSLFSGGKRIRPLLCMITYNELA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N L A +E IH YSLIHDDLP+MD+ +RR KPT H Y E AI+AG+GLL Sbjct: 61 ENPTLDKILPFAATLEMIHTYSLIHDDLPAMDDDDLRRDKPTNHKVYSEAVAILAGDGLL 120 Query: 125 TYAFEIISSPKTQLK--DNIRSQL-MLSLTHNI-GLQGMLGGQMLDIQ--DEFIDETQVF 178 + E+IS L D ++ + L +N G+ GM+GGQ+LDI +E +E Sbjct: 121 NMSMEVISKYMESLDDIDELKKCIKALKFIYNCSGVLGMIGGQLLDIDYLNEQYNEELCE 180 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + +KT AL+ + +GAIMA +L+ FG+ +G+ +Q DDLLD +DL Sbjct: 181 DMYSLKTAALLKASIVTGAIMAGCEGEIITKLKEFGQYIGLAYQYKDDLLDMNKDL 236 >gi|225868943|ref|YP_002744891.1| geranyltranstransferase [Streptococcus equi subsp. zooepidemicus] gi|225702219|emb|CAW99956.1| putative geranyltranstransferase [Streptococcus equi subsp. zooepidemicus] Length = 289 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 106/208 (50%), Gaps = 13/208 (6%) Query: 34 QHNDR-------LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--VGAAIECIHC 84 Q+ DR L AI Y++ GG K L+ LT + AAIE IH Sbjct: 13 QYYDRQSTVSADLEEAILYSVDGGGKRLRPLILLELLEGFGLALTDAHYAIAAAIEMIHT 72 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 SLIHDDLP+MDN RRG+ T H Q+DE TAI+AG+ L F +I+ L ++ Sbjct: 73 GSLIHDDLPAMDNDDYRRGRLTSHKQFDEATAILAGDSLFLDPFALIAG--ADLPADLLV 130 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHA 202 QL+ + G GM+GGQ+LD++ E +D ++ I KTG L+ + I+A Sbjct: 131 QLIQQFSLASGTFGMVGGQLLDMKGEQQLLDIQELSDIHANKTGKLLTLPFVAAGIIAEQ 190 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230 S + L G +G FQ+ DD+LD Sbjct: 191 SADVLSCLWEAGRLVGQAFQIRDDILDV 218 >gi|6690726|gb|AAF24294.1| CrtE [Rhodobacter sphaeroides] Length = 288 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 13/202 (6%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHD 90 ++ +L +A+ YA+ GG +IR L+ A+ + A A+E IHC SL+HD Sbjct: 21 SEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPVLSDAAAVALELIHCASLVHD 80 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149 DLP D+ IRRGKPTVH Y E AI+ G+ L+ FE+++ + R+ QL+ + Sbjct: 81 DLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLA--RAAADQPQRALQLVTA 138 Query: 150 LTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 L G+ G+ GQ + + + + + KTGAL A + GAI A+ E E Sbjct: 139 LAVRTGMPMGICAGQGWESESQI----NLSAYHRAKTGALFIAATQMGAI---AAGYEAE 191 Query: 209 RLRCFGENLGIIFQLADDLLDC 230 G +G FQ+ADDL D Sbjct: 192 PWEELGARIGEAFQVADDLRDA 213 >gi|312963291|ref|ZP_07777774.1| geranyltranstransferase [Pseudomonas fluorescens WH6] gi|311282371|gb|EFQ60969.1| geranyltranstransferase [Pseudomonas fluorescens WH6] Length = 295 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 125/227 (55%), Gaps = 10/227 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 + R++ L+ L + + M+ RL A+RY+++ GGK++R L Sbjct: 9 SQARVNAALEPLFVAPSPQMK-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGAPAE 63 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 64 QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGLQSLAFSA 123 Query: 131 ISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187 + P + + IR +++ +L G GM+GGQ +D+ +D+ + + + KTGA Sbjct: 124 LLDPGLSSVNAEIRLRMVTALALAAGPAGMVGGQAIDMGSVSLKLDQQALEHMHRHKTGA 183 Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ A + GA+ + A + L+ + +G+ FQ+ DD+LD E D Sbjct: 184 LIEAAVQLGALASGRAEAAQLAALQTYARAIGLAFQVQDDILDVESD 230 >gi|213962451|ref|ZP_03390713.1| polyprenyl synthetase [Capnocytophaga sputigena Capno] gi|213954777|gb|EEB66097.1| polyprenyl synthetase [Capnocytophaga sputigena Capno] Length = 322 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 20/200 (10%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +RY L LGGK++R L LF+ ++ AL AIE H +SL+HDD+ MD Sbjct: 27 LYEPMRYILQLGGKRLRPILTLIATDLFDADYHKALNAAMAIEMFHNFSLVHDDI--MDK 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+ TVH +++ AI++G+ +L A+ QL D+ S + LT + Sbjct: 85 ASLRRGETTVHKKWNTNIAILSGDAMLVKAY--------QLLDDYPSDVFSLLTKILSRT 136 Query: 158 GML--GGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 + GQ D+ +F +T+V + + KT L+ A + G I+A+AS + + Sbjct: 137 ALKVCEGQQWDM--DFETQTEVSIPDYLQMIRYKTAVLIGAALQMGVIIANASPENQMPI 194 Query: 211 RCFGENLGIIFQLADDLLDC 230 FGE LG+ FQL DD LD Sbjct: 195 YTFGEELGLAFQLQDDYLDA 214 >gi|189184004|ref|YP_001937789.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda] gi|189180775|dbj|BAG40555.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda] Length = 338 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 106/183 (57%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L + LFN + L+ + AA+E IH +L+HDD+ +D +RR PTVH Sbjct: 54 GGKRIRPMLTIIISKLFNYHGLSHYYLAAAVELIHSATLLHDDV--VDESKMRRSHPTVH 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDI 167 +++D T+I+ G+ L + +F+++ +K N IR+ SL+ N + G + Q+ + Sbjct: 112 LKWDTKTSILIGDFLFSQSFKLM------IKSNSIRALKSFSLSFNTIITGEVK-QLTQL 164 Query: 168 QDE-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++ I E + F + + KT L +CE AI+++ S ++ FG LG+IFQ+ DD Sbjct: 165 HNQKIITEDEYFRVIQAKTAELFGTSCEIAAIISNQSAPTCLLVKTFGIKLGLIFQIVDD 224 Query: 227 LLD 229 +LD Sbjct: 225 ILD 227 >gi|148284169|ref|YP_001248259.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Boryong] gi|146739608|emb|CAM79381.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Boryong] Length = 338 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 106/183 (57%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L + LFN + L+ + AA+E IH +L+HDD+ +D +RR PTVH Sbjct: 54 GGKRIRPMLTIIISKLFNYHGLSHYYLAAAVELIHSATLLHDDV--VDESKMRRSHPTVH 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDI 167 +++D T+I+ G+ L + +F+++ +K N IR+ SL+ N + G + Q+ + Sbjct: 112 LKWDTKTSILIGDFLFSQSFKLM------IKSNSIRALKSFSLSFNTIITGEVK-QLTQL 164 Query: 168 QDE-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++ I E + F + + KT L +CE AI+++ S ++ FG LG+IFQ+ DD Sbjct: 165 HNQKIITEDEYFRVIQAKTAELFGTSCEIAAIISNQSAPTCLLVKTFGIKLGLIFQIVDD 224 Query: 227 LLD 229 +LD Sbjct: 225 ILD 227 >gi|260899213|ref|ZP_05907608.1| geranyltranstransferase [Vibrio parahaemolyticus AQ4037] gi|308106680|gb|EFO44220.1| geranyltranstransferase [Vibrio parahaemolyticus AQ4037] Length = 234 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/162 (41%), Positives = 100/162 (61%), Gaps = 4/162 (2%) Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SP 134 +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ G+ L T AF II+ P Sbjct: 8 ASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAFTIIADGP 67 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFA 192 + +N R ++ +L H+ G GM GQ LD+ ++ + ++ I + KTGAL+ A Sbjct: 68 LSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAEMEEIHRKKTGALIDCA 127 Query: 193 CESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 + GA+ A E L + + +G+ FQ+ DD+LD D Sbjct: 128 VKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISD 169 >gi|306825094|ref|ZP_07458436.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432530|gb|EFM35504.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 291 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLF 65 K QE +++ L+D + Q L A+ Y++ GGK+IR FL+ E SL Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLREAVLYSIHAGGKRIRPFLLLEVLESLQ 55 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VVIRPAYAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L + I+ L+++L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPNQIKVDLIVNLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDV 220 >gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea] Length = 367 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 6/194 (3%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L ++ A+E IH SLIHDDLP + Sbjct: 104 AMRYSLLAGGKRVRPILCIAACELVGGEESNSVPAACAVEMIHTMSLIHDDLPCYGQRDL 163 Query: 101 RRGKPTVHIQYD-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRGK + E A++AG+ LL ++FE I++ + ++ +IG +G+ Sbjct: 164 RRGKAHETTKSSCEDVAVLAGDSLLAFSFEYIATATKNVSPAKNFSRSRRISKSIGTEGL 223 Query: 160 LGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + GQ+ D +++ Q+ I KT AL+ A GAI+ + E E+LR F Sbjct: 224 VAGQVADFVINGENQMFGLDQLEFIHIHKTAALLEAAVVLGAILGGGNPEEVEKLRRFAR 283 Query: 216 NLGIIFQLADDLLD 229 +G++FQ+ DD+LD Sbjct: 284 CIGLLFQVVDDILD 297 >gi|118576797|ref|YP_876540.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase [Cenarchaeum symbiosum A] gi|118195318|gb|ABK78236.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase [Cenarchaeum symbiosum A] Length = 321 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 97/194 (50%), Gaps = 15/194 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R +++ + A+ AIE IH ++L+HDD+ MDN IR G PTVH Sbjct: 35 GGKRFRPYMLIKSCQALGGKKSDAMPAATAIEMIHNFTLLHDDI--MDNDSIRHGVPTVH 92 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGG 162 ++ AI+AG+ L + A+++IS P+ K R L+ +G M G Sbjct: 93 KKFGVPVAILAGDVLFSKAYQVISGPRVPEKRAARLTSRLAAACVDVCEGQLYDMDMAEG 152 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 L + E+I MI K KT +L AC GAI + A + + R FG LG+ FQ Sbjct: 153 AKLPTRSEYI-----MMIGK-KTASLFGAACAMGAICSGADEKDARRFAAFGTGLGVAFQ 206 Query: 223 LADDLLDCEEDLPK 236 + DDL+ D PK Sbjct: 207 ITDDLIGITGD-PK 219 >gi|239907069|ref|YP_002953810.1| geranyltranstransferase [Desulfovibrio magneticus RS-1] gi|239796935|dbj|BAH75924.1| geranyltranstransferase [Desulfovibrio magneticus RS-1] Length = 299 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 118/201 (58%), Gaps = 12/201 (5%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + LL+A+ Y+LL GGK++R L A LF+ + + A E IH YSLIHDDLP+M Sbjct: 33 ENLLAAMEYSLLAGGKRLRPVLCLVFAELFDADRARVMPFAAGFEIIHTYSLIHDDLPAM 92 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS----LT 151 D+ +RRG+P+ H + E AI+AG+ LLT AF + ++ + ++L+L Sbjct: 93 DDDDLRRGRPSNHKVFGEAGAILAGDALLTEAFGCMG----RVWPGVAAELVLPALAEAA 148 Query: 152 HNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G GM+GGQ+LD+ E + ++ +Q +KTGAL+ +C GAI+A A + Sbjct: 149 KAAGAAGMVGGQVLDMDYTAREGVTLAELARMQALKTGALLTASCVCGAILAGAGEEGVA 208 Query: 209 RLRCFGENLGIIFQLADDLLD 229 R R +GE +G FQ+ DD+LD Sbjct: 209 RAREYGEAVGAAFQIVDDILD 229 >gi|330812001|ref|YP_004356463.1| geranyltranstransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380109|gb|AEA71459.1| geranyltranstransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 295 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 124/227 (54%), Gaps = 10/227 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 + R++ L+ L + + RL A+RY+++ GGK++R L Sbjct: 9 SQARVNAALETLFSAPSPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGQAE 63 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A A+E IH YSL+HDDLP+MD+ +RRG+PT H Q+DE AI+AG+GL + AF Sbjct: 64 QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLAFTA 123 Query: 131 ISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187 + P + +R ++ +L G GM+GGQ +D+ +D++ + + + KTGA Sbjct: 124 LLDPALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHKTGA 183 Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ + GA+ + A+ + + L+ + +G+ FQ+ DD+LD E D Sbjct: 184 LIEASVRLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESD 230 >gi|70605942|ref|YP_254812.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius DSM 639] gi|729570|sp|P39464|GGPS_SULAC RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase gi|506371|dbj|BAA43200.1| geranylgeranyl diphosphate synthase [Sulfolobus acidocaldarius] gi|68566590|gb|AAY79519.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius DSM 639] Length = 330 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/188 (35%), Positives = 101/188 (53%), Gaps = 7/188 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++T + LF A GAAIE +H ++L+HDD+ DN IRRG PTVH Sbjct: 41 GGKRLRPLILTISSDLFGGQRERAYYAGAAIEVLHTFTLVHDDIMDQDN--IRRGLPTVH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++Y AI+AG+ L AF++++ L + T +I + + GQ +D++ Sbjct: 99 VKYGLPLAILAGDLLHAKAFQLLTQALRGLPSETIIKAFDIFTRSIII--ISEGQAVDME 156 Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E I E + + KT AL + GA++A A+ N+ + FG NLGI FQ+ D Sbjct: 157 FEDRIDIKEQEYLDMISRKTAALFSASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVD 216 Query: 226 DLLDCEED 233 D+L D Sbjct: 217 DILGLTAD 224 >gi|300811648|ref|ZP_07092124.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497349|gb|EFK32395.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 287 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 17/233 (7%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASL 64 + +E + I++D L + + +D R + Y+++ GGK++R L Sbjct: 2 TTFKEFQAKYTPIINDFL---EGQLAKESDDPRFAEIMAYSVMAGGKRLRPLLFLATLDA 58 Query: 65 FNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 V +T V AA IE IH YSLIHDDLP+MDN RRG+ T H ++ E AI+AG+ Sbjct: 59 LGV-EITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDA 117 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM 179 L + I+ + K L+ +T +G +GM+ GQ LDI +E E + Sbjct: 118 LQPLGIQWIAQAEHNWK------LVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDH 171 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ +KTG L+ + + +A + ++ F ++ G +QL DDL+D E Sbjct: 172 MEWLKTGCLILASVQMATALAACPNQQAQKYLAFAKHFGRSYQLYDDLVDIVE 224 >gi|62959175|gb|AAY23695.1| farnesyl diphosphate synthase [Planococcus sp. JL-69] Length = 144 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 7/136 (5%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG PTVH ++DE TA++AG+ L T FE+++ P +R+ L LSL G +GM Sbjct: 12 MRRGMPTVHRKWDEATAVLAGDALQTLGFELVACPDCHPDAVVRADLALSLARAAGARGM 71 Query: 160 LGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + GQ LD+ E D Q+ +Q KTGAL ++ E+GA MA A L + Sbjct: 72 VLGQALDMAAEQSDTPLSLDQITALQAGKTGALFGWSAEAGARMARADITP---LTGYAR 128 Query: 216 NLGIIFQLADDLLDCE 231 LG+ FQ+ADD+LD E Sbjct: 129 ALGLAFQIADDILDVE 144 >gi|260773301|ref|ZP_05882217.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio metschnikovii CIP 69.14] gi|260612440|gb|EEX37643.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio metschnikovii CIP 69.14] Length = 261 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 113/199 (56%), Gaps = 11/199 (5%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYI 100 +RY LL GGK+ R +LV + LT L A A+EC+H YSLIHDDLP+MD+ + Sbjct: 1 MRYGLLLGGKRARPYLVYITGQMLGCQ-LTDLDTPACAVECVHAYSLIHDDLPAMDDDDL 59 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGM 159 RRGKPT HI++DE TAI+ G+ L T AF I++ + + + R +++ +L G QGM Sbjct: 60 RRGKPTCHIKFDEATAILTGDALQTLAFTILAEGQLSTHGETNRIKMVQALAEASGAQGM 119 Query: 160 LGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFG 214 GQ LD+ E +DE + I KTGALM A GA+ A +L + Sbjct: 120 CLGQALDLAAENRRITLDELET--IHHNKTGALMRCAIRMGAMAAGQKGLAILPQLDRYA 177 Query: 215 ENLGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 178 AAVGLAFQVQDDILDIISD 196 >gi|300814962|ref|ZP_07095190.1| geranyltranstransferase family protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300510932|gb|EFK38204.1| geranyltranstransferase family protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 289 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 85/236 (36%), Positives = 132/236 (55%), Gaps = 13/236 (5%) Query: 11 ENSKRIDTI---LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL--VTECASL 64 +N + ++TI LD L T +++ ++ +++Y+L GGK+IR L +T Sbjct: 2 KNLEELNTIIGELDSYLSNTFTYVDDSLA-KIYESMKYSLFSGGKRIRPLLCMITYNELA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N L A +E IH YSLIHDDLP+MD+ +RR KPT H Y E AI+AG+GLL Sbjct: 61 ENPTLDKILPFAATLEMIHTYSLIHDDLPAMDDDDLRRDKPTNHKVYSEAVAILAGDGLL 120 Query: 125 TYAFEIISSPKTQLK--DNIRS--QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVF 178 + E+IS L D ++ + + + ++ G+ GM+GGQ+LDI +E +E Sbjct: 121 NMSMEVISKYMESLDDIDELKKCIKALKFIYNSSGVLGMIGGQLLDIDYLNEQYNEELCE 180 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + +KT AL+ + +GAIMA +L+ FG+ +G+ +Q DDLLD +DL Sbjct: 181 DMYSLKTAALLKASIVTGAIMAGCDGEIITKLKEFGQYIGLAYQYKDDLLDMNKDL 236 >gi|148993815|ref|ZP_01823217.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae SP9-BS68] gi|168489033|ref|ZP_02713232.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae SP195] gi|147927640|gb|EDK78665.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae SP9-BS68] gi|183572405|gb|EDT92933.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae SP195] gi|332073546|gb|EGI84025.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA17570] Length = 291 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE ++++L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESVLEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ SL+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIASLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|62959171|gb|AAY23693.1| farnesyl diphosphate synthase [Erythrobacter longus] Length = 147 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/136 (39%), Positives = 82/136 (60%), Gaps = 4/136 (2%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +R GK T+H YDE TA++AG+ L AFEI++ T +RS+L+ +L G+ GM Sbjct: 12 LRHGKATLHHVYDEATAVLAGDALHALAFEILADHGTSSDPFVRSELIATLGTASGMNGM 71 Query: 160 LGGQMLD-IQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GGQM+D + DE D + +Q++KTGAL+ A E GA++ + LR + Sbjct: 72 AGGQMMDMVADEEGVTYDLQAITRLQQLKTGALLSCAVEMGAVLGKVPVEGRAHLRAYSR 131 Query: 216 NLGIIFQLADDLLDCE 231 ++G+ FQ+ADD+LD E Sbjct: 132 DIGLAFQIADDILDVE 147 >gi|104774286|ref|YP_619266.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514371|ref|YP_813277.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423367|emb|CAI98223.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093686|gb|ABJ58839.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126073|gb|ADY85403.1| Geranylgeranyl diphosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 287 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 17/233 (7%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASL 64 + +E + I++D L + + +D R + Y+++ GGK++R L Sbjct: 2 TTFKEFQAKYTPIINDFL---EGQLAKESDDPRFAEIMAYSVMAGGKRLRPLLFLATLDA 58 Query: 65 FNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 V +T V AA IE IH YSLIHDDLP+MDN RRG+ T H ++ E AI+AG+ Sbjct: 59 LGVE-ITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDA 117 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM 179 L + I+ + K L+ +T +G +GM+ GQ LDI +E E + Sbjct: 118 LQPLGIQWIAQAEHNWK------LVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDH 171 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ +KTG L+ + + +A + ++ F ++ G +QL DDL+D E Sbjct: 172 MEWLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVE 224 >gi|325685896|gb|EGD27962.1| farnesyltranstransferase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 296 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 13/203 (6%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDL 92 + R + Y+++ GGK++R L V +T V AA IE IH YSLIHDDL Sbjct: 38 DSRFAEIMAYSVMAGGKRLRPLLFLATLDALGVE-ITEKEVQAACGIELIHTYSLIHDDL 96 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN RRG+ T H ++ E AI+AG+ L + I+ + K L+ +T Sbjct: 97 PAMDNDDYRRGELTSHKKWGEAEAILAGDALQPLGIQWIAQAEHNWK------LIEIITE 150 Query: 153 NIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 +G +GM+ GQ LDI +E E + ++ +KTG L+ + + +A + ++ Sbjct: 151 AVGPKGMVAGQYLDIDTTNNEDSSEEVIDHMEWLKTGCLILASVQMATALAACPDQQAQK 210 Query: 210 LRCFGENLGIIFQLADDLLDCEE 232 F ++ G +QL DDL+D E Sbjct: 211 YLAFAKHFGRSYQLYDDLVDIVE 233 >gi|254262158|emb|CAZ90487.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter turicensis] Length = 224 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/154 (37%), Positives = 91/154 (59%), Gaps = 3/154 (1%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E +H SLI DD+P MDN +RRG+PT+H QY E AI+A LL+ AF ++ + + Sbjct: 4 AVEMVHASSLILDDIPCMDNAALRRGRPTIHRQYGEDVAILAAVALLSSAFGVMVAAQG- 62 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACES 195 L RSQ + L+ +G QG++ GQ D+++ + ++ ++KT L + Sbjct: 63 LSPECRSQAVAELSMAVGTQGLVQGQYKDLREGTAPRSAEEIATTNELKTSVLFGATLQI 122 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A+ A AS ++++RCF ++LG FQL DDL D Sbjct: 123 AALAAGASPAARQKMRCFAQDLGQAFQLLDDLAD 156 >gi|313124102|ref|YP_004034361.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280665|gb|ADQ61384.1| Farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 287 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 17/233 (7%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASL 64 + +E + I++D L + + +D R + Y+++ GGK++R L Sbjct: 2 TTFKEFQAKYTPIINDFL---EGQLAKESDDSRFAEIMAYSVMAGGKRLRPLLFLATLDA 58 Query: 65 FNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 V +T V AA IE IH YSLIHDDLP+MDN RRG+ T H ++ E AI+AG+ Sbjct: 59 LGVE-ITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDA 117 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM 179 L + I+ + K L+ +T +G +GM+ GQ LDI +E E + Sbjct: 118 LQPLGIQWIAQAEHNWK------LVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDH 171 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ +KTG L+ + + +A + ++ F ++ G +QL DDL+D E Sbjct: 172 MEWLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVE 224 >gi|242399212|ref|YP_002994636.1| Bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sibiricus MM 739] gi|242265605|gb|ACS90287.1| Bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sibiricus MM 739] Length = 341 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 20/235 (8%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNV 67 L+E K +D ++ +L+ + + + A R Y L GGK+IR F+V Sbjct: 10 LKEKIKIVDEVIFELIPEKEPKI-------IYDAARHYPLAGGKRIRPFIVLTSTEAVGG 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N A+ AA+E +H YSL+HDD+ MD RRG+PTVH + AI+AG+ L + Sbjct: 63 NPEKAVYAAAAVELLHNYSLVHDDIMDMDEK--RRGRPTVHKVWGVNMAILAGDLLFSKV 120 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---K 184 FE ++ + + ++ ++S T N + GQ D++ E + + KM K Sbjct: 121 FEAVAKIPVEAEKVVKVLDVISKTSN----ELCEGQARDLEFENKETVTIDEYMKMISGK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 TGAL+ + G ++ + + L +G N+GI FQ+ DD+LD EE L K Sbjct: 177 TGALIDASATIGGLIGTENNEYIQALSKYGRNVGIAFQIWDDVLDLIADEEKLGK 231 >gi|17481240|dbj|BAB79204.1| farnesyl diphosphate synthase [Rhodobacter sp. AP-10] Length = 137 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 8/130 (6%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+PTVH+++DEVTA++AG+ L T AFE+ P D R +L+ +L G++GM Sbjct: 12 LRRGQPTVHVKWDEVTAVLAGDALQTLAFELCCDPAMGPADR-RIELVAALARASGVEGM 70 Query: 160 LGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + GQ LDI E ++ +Q KTGAL+ FA E+GAI+A A ++ LR + + Sbjct: 71 VHGQALDIAAESAGRPLTLEEITALQAGKTGALIVFAAEAGAILAGA---DRAPLRRYAQ 127 Query: 216 NLGIIFQLAD 225 LG+ FQ+AD Sbjct: 128 ALGLAFQIAD 137 >gi|313886949|ref|ZP_07820652.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I] gi|312923646|gb|EFR34452.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I] Length = 334 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%) Query: 39 LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L + IRY L G K++R L + A A+E H ++L+HDD+ MD Sbjct: 34 LYAPIRYTLEQEGAKRVRPVLALLMQAYLRPEAPLAASPIVALEVFHNFTLLHDDV--MD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKP+V+ +Y AI++G+ +L A+++++ + + +++ L N Sbjct: 92 NSPVRRGKPSVYAKYGLTPAILSGDAMLILAYQMLT-------EGVSPEMLPDLIQNFNK 144 Query: 157 QGML--GGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 L GQ LD++ E ++ + Q + KT L+ A GAI++ S E E Sbjct: 145 MATLIMEGQQLDLEYEQLDYVSKEQYLEMIGYKTAVLIATATRFGAILSKGSATELESSY 204 Query: 212 CFGENLGIIFQLADDLLDCEED 233 FG NLG+ FQL DD LD D Sbjct: 205 AFGWNLGLAFQLQDDYLDLYGD 226 >gi|146304882|ref|YP_001192198.1| geranyltranstransferase [Metallosphaera sedula DSM 5348] gi|145703132|gb|ABP96274.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Metallosphaera sedula DSM 5348] Length = 327 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 121/227 (53%), Gaps = 15/227 (6%) Query: 16 IDTILDDLLLQTASHMQT-QHND--RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 +D ++++ + + M + H D L A RY + GGK++R +V + L Sbjct: 3 LDQYFEEIVAKVNATMDSFLHGDTRELYEASRYLISAGGKRLRPLVVVLSSDLLGGERHR 62 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+ GAA+E +H ++LIHDD+ MD RRG PTVH+++ TAI+AG+ L AF+I+ Sbjct: 63 AILAGAAVEVLHNFTLIHDDI--MDQDTTRRGIPTVHVKWGIPTAILAGDLLHAKAFQIL 120 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGAL 188 + L ++ +++ + ++ + + GQ +D++ E I E + + KT L Sbjct: 121 TESIKGLSGDVAYKVLDCFSRSVIV--VSEGQAMDMEFEKRWDIREKDYLEMIRRKTAQL 178 Query: 189 MCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 FAC + G ++A S+ E L FGE +GI FQ+ DD+L D Sbjct: 179 --FACSAYLGGVLAGGSEEEVNNLYEFGEKMGIAFQIVDDILGITAD 223 >gi|209965378|ref|YP_002298293.1| geranyltranstransferase [Rhodospirillum centenum SW] gi|209958844|gb|ACI99480.1| geranyltranstransferase [Rhodospirillum centenum SW] Length = 289 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 13/200 (6%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPS 94 RL A+RY++ GG ++R L A + LT A+IE +HC SL+HDDLP Sbjct: 26 RLAEAMRYSVFPGGHRLRPRLCVAVARACGDDAPELTDA-AAASIELLHCASLVHDDLPC 84 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 D+ IRR KP+VH + E A++AG+GL+ AF++++ Q D + LM ++ ++ Sbjct: 85 FDDASIRRSKPSVHKAFGEPLAVLAGDGLIVLAFDLLARAAAQRPDRL-IPLMGVVSRSV 143 Query: 155 GL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G+ G++ GQ + + E + + KTGAL A + A A+ + R Sbjct: 144 GVPSGIIAGQAWECE----PEADLSEYHRAKTGALFAGATMA---GAAAAGADPTPWRFL 196 Query: 214 GENLGIIFQLADDLLDCEED 233 GE LG +Q+ADDL D D Sbjct: 197 GERLGEAYQVADDLRDVAAD 216 >gi|167764761|ref|ZP_02436882.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC 43183] gi|167697430|gb|EDS14009.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC 43183] Length = 324 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 117/221 (52%), Gaps = 18/221 (8%) Query: 22 DLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LL + SH+ +R L + Y L +GGK+IR L+ +L+ + Sbjct: 6 ELLDKINSHIADLQFERTPKGLYDPVAYVLSMGGKRIRPVLMLMAYNLYKEDVRPVFSPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PK 135 IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A++ ++ P Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADKRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAQCPA 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFA 192 LK + + SLT L+ + GQ +D+ Q + E + + ++KT L+ + Sbjct: 124 EHLKAVMD---LFSLT---ALE-ICEGQQMDMDFEQRSDVKEEEYLEMIRLKTSVLLAAS 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA++ AS + ERL FG N+G+ FQL DDLLD D Sbjct: 177 LKIGALLGGASAEDAERLYDFGMNMGVAFQLKDDLLDVYGD 217 >gi|29347468|ref|NP_810971.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|29339368|gb|AAO77165.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron VPI-5482] Length = 324 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 116/207 (56%), Gaps = 16/207 (7%) Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T+ + L I Y L LGGK+IR L+ +L+ + + IE H ++L+HDD Sbjct: 21 TRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPATGIEVYHNHTLLHDD 80 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLS 149 L MD +RRGKPTVH +++ TAI++G+ +L AF ++ +P+ LK+ I + S Sbjct: 81 L--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAPE-HLKEVID---LFS 134 Query: 150 LTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 LT L+ + GQ LD++ E + E + + ++KT L+ + + GAI+A AS + Sbjct: 135 LT---ALE-ICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASLKIGAILAGASAAD 190 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 E L FG +G+ FQL DDLLD D Sbjct: 191 AENLYNFGMQIGVAFQLQDDLLDVYGD 217 >gi|325958579|ref|YP_004290045.1| dimethylallyltranstransferase [Methanobacterium sp. AL-21] gi|325330011|gb|ADZ09073.1| Dimethylallyltranstransferase [Methanobacterium sp. AL-21] Length = 328 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 17/198 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKKIR +V A AL+ AA+E IH +SLIHDD+ MD +RRG+P+VH Sbjct: 41 GGKKIRPSMVVLSAIAVGGAPEEALKTAAAVELIHTFSLIHDDI--MDEDDMRRGEPSVH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNI--GLQGMLGGQML 165 + + E AI+AG+ L + AFE ++ +P DN+ + ++ + + GQ Sbjct: 99 VLWGEPMAILAGDTLFSKAFETVLETP----IDNVSYERVVGALKTVVDSCIKICEGQAS 154 Query: 166 DI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D+ E +E + MI K KTGAL+ + +SGAI+ + + E L +G +G+ F Sbjct: 155 DMCFEGNFEVSEEAYMNMIYK-KTGALIAASTKSGAIIGGGTPEQVELLSEYGRLVGLAF 213 Query: 222 QLADDLLDC---EEDLPK 236 Q+ DD LD E+DL K Sbjct: 214 QIQDDYLDVMSDEQDLGK 231 >gi|229579956|ref|YP_002838355.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14] gi|228010671|gb|ACP46433.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14] Length = 331 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 11/223 (4%) Query: 13 SKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVN 68 S + + +D++ H++ + N R L + L GGK++R ++ + L + Sbjct: 2 SDELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGD 61 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG+ L AF Sbjct: 62 RQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAF 119 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGA 187 E ++ L + + ++I + + GQ +D+ E +D T+ +Q +K Sbjct: 120 EALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEYVQMIKGKT 177 Query: 188 LMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 M F+C + G I+ AS + + L +G NLGI FQ+ DD+L Sbjct: 178 AMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDIL 220 >gi|227831075|ref|YP_002832855.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15] gi|229581383|ref|YP_002839782.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51] gi|238620509|ref|YP_002915335.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4] gi|284998571|ref|YP_003420339.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5] gi|227457523|gb|ACP36210.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15] gi|228012099|gb|ACP47860.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51] gi|238381579|gb|ACR42667.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4] gi|284446467|gb|ADB87969.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5] Length = 331 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 11/223 (4%) Query: 13 SKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVN 68 S + + +D++ H++ + N R L + L GGK++R ++ + L + Sbjct: 2 SDELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGD 61 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG+ L AF Sbjct: 62 RQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAF 119 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGA 187 E ++ L + + ++I + + GQ +D+ E +D T+ +Q +K Sbjct: 120 EALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEYVQMIKGKT 177 Query: 188 LMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 M F+C + G I+ AS + + L +G NLGI FQ+ DD+L Sbjct: 178 AMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDIL 220 >gi|111073607|emb|CAL29452.1| geranyltranstransferase [Wolbachia endosymbiont of Onchocerca volvulus] Length = 243 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 14/225 (6%) Query: 16 IDTILDDLLL-QTASHMQTQHNDRLLSAIRYALLGGKK--IRSFLVTECASLFNVNHLTA 72 +D ++ LL+ +T + ++ + A+ Y L K IR L+T + +FN A Sbjct: 2 LDKLIKSLLIAETDKILSKVSQNKHILAMHYVLFAPTKHIIRPLLITALSQVFNSE---A 58 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNG--YIRRGKPTVHIQYDEVTAI-IAGNGLLTYAFE 129 + + A++C+H +SLI DDLP +DN + + ++DE TA+ +A + LT A E Sbjct: 59 ISIAVAVKCVHTHSLIQDDLPYIDNSNNNSKNQLSCCYKKFDEATAVLVAEDAPLTLASE 118 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 I+SSP N R +++ S + G +GM+G Q+LD F ++ + MKT L+ Sbjct: 119 ILSSPNKD--SNKRHEIIKSPSQMRGTKGMVGEQVLDSDKNF---GKIKKMHLMKTAKLL 173 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 C+ GAI+ ++ L + NLG+IFQ DD + E+ L Sbjct: 174 AAPCKIGAIVGDTPDKQRRALYNYRINLGLIFQAEDDTENYEQAL 218 >gi|322376511|ref|ZP_08051004.1| geranyltranstransferase [Streptococcus sp. M334] gi|321282318|gb|EFX59325.1| geranyltranstransferase [Streptococcus sp. M334] Length = 291 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE + + L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVQSALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A + +E+L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEMQEKLKTVGELIGLAFQVRDDVLDV 220 >gi|15228704|ref|NP_189589.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75335025|sp|Q9LIA0|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11, chloroplastic; Short=GGPP synthase 11; Short=GGPS11; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11; AltName: Full=Dimethylallyltranstransferase 11; AltName: Full=Farnesyl diphosphate synthase 11; AltName: Full=Farnesyltranstransferase 11; AltName: Full=Geranyltranstransferase 11; Flags: Precursor gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana] Length = 357 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 11/200 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + TA+ A+E IH SLIHDDLP MD+ + Sbjct: 93 AVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADL 152 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H ++ E A++AG+ LL AFE +S+ + IR+ ++ L IG + Sbjct: 153 RRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFVSNGLVAPERMIRA--VMELAKAIGTK 210 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQ+ D+ + ++ V + I KT AL+ A GAIM ++ E E+LR Sbjct: 211 GLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRK 270 Query: 213 FGENLGIIFQLADDLLDCEE 232 + +G++FQ+ DD+LD E Sbjct: 271 YARCIGLLFQVVDDILDVTE 290 >gi|199597161|ref|ZP_03210593.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus HN001] gi|258508675|ref|YP_003171426.1| geranyltranstransferase [Lactobacillus rhamnosus GG] gi|199591965|gb|EDZ00040.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus HN001] gi|257148602|emb|CAR87575.1| Geranyltranstransferase [Lactobacillus rhamnosus GG] gi|259649981|dbj|BAI42143.1| geranyltranstransferase [Lactobacillus rhamnosus GG] Length = 283 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 111/200 (55%), Gaps = 7/200 (3%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L +A+ Y++ GGK++R L+ ++++ AL AA+E +H YSLIHDDLP+ Sbjct: 25 NPHLRAAMAYSVDAGGKRLRPLLLLSVVAMYDGVVAEALPAAAALEFVHTYSLIHDDLPA 84 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN +RRG+PT H Q+ E AI+AG+ LLT AF I+S Q ++L+ L Sbjct: 85 MDNDDLRRGQPTNHKQFGEALAILAGDALLTDAFAILS----QHYPGKGAELVQILAEAA 140 Query: 155 GLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+ GQ+LD+ E D + + + KTGAL+ G++ + ++ L Sbjct: 141 GSSGMVAGQVLDMDGEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAIPEADQAALAD 200 Query: 213 FGENLGIIFQLADDLLDCEE 232 F G+ FQ+ DD+ D + Sbjct: 201 FAAAFGLGFQIKDDINDVTK 220 >gi|307708727|ref|ZP_07645190.1| geranyltranstransferase [Streptococcus mitis NCTC 12261] gi|307615301|gb|EFN94511.1| geranyltranstransferase [Streptococcus mitis NCTC 12261] Length = 291 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQAKLKTVGELIGLAFQVRDDVLDV 220 >gi|298385074|ref|ZP_06994633.1| polyprenyl synthetase [Bacteroides sp. 1_1_14] gi|298262218|gb|EFI05083.1| polyprenyl synthetase [Bacteroides sp. 1_1_14] Length = 324 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 122/221 (55%), Gaps = 16/221 (7%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 +LD + + + T+ + L I Y L LGGK+IR L+ +L+ + + Sbjct: 7 LLDKINNHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPAT 66 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPK 135 IE H ++L+HDDL MD +RRGKPTVH +++ TAI++G+ +L AF ++ +P+ Sbjct: 67 GIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAPE 124 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 LK+ I + SLT L+ + GQ LD++ E + E + + ++KT L+ + Sbjct: 125 -HLKEVID---LFSLT---ALE-ICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAAS 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GAI+A AS + E L FG +G+ FQL DDLLD D Sbjct: 177 LKIGAILAGASAVDAENLYNFGMQIGVAFQLQDDLLDVYGD 217 >gi|60682991|ref|YP_213135.1| putative isoprenoid biosynthesis-like protein [Bacteroides fragilis NCTC 9343] gi|60494425|emb|CAH09221.1| putative isoprenoid biosynthesis related protein [Bacteroides fragilis NCTC 9343] Length = 324 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 113/200 (56%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I+Y L +GGK+IR L+ +L+ + + AIE H Y+L+HDDL MD Sbjct: 27 LYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPATAIEVYHNYTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156 +RRGK TVH +++ TAI++G+ +L A++ +++ ++ LK+ + + SLT L Sbjct: 85 ADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLKEVMD---LFSLT---AL 138 Query: 157 QGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + + GQ +D+ E + E + + ++KT L+ + + GAI+ AS + E L F Sbjct: 139 E-ICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASPEDAENLYDF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G +G+ FQL DDLLD D Sbjct: 198 GMQIGVAFQLQDDLLDVYGD 217 >gi|282881608|ref|ZP_06290277.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1] gi|281304594|gb|EFA96685.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1] Length = 324 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 109/201 (54%), Gaps = 16/201 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L+ +L+ + L AIE H Y+L+HDDL MD Sbjct: 27 LYEPIEYVLSLGGKRIRPILMMLAYNLYQEHPEEILMPACAIETYHNYTLLHDDL--MDC 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156 +RRG TVH ++D TAI++G+ +L A++ +++ + LK+ I L IG Sbjct: 85 ADLRRGCATVHKRWDANTAILSGDSMLVLAYQRMATCRADYLKEVI--DLFTQTALEIG- 141 Query: 157 QGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GQ D+ +D+ ++ + MI ++KT L+ A + GAI+ ASQ + E L Sbjct: 142 ----EGQQYDMDFEKRDDVTEDEYIEMI-RLKTSVLLACALKIGAILGGASQEDAENLYR 196 Query: 213 FGENLGIIFQLADDLLDCEED 233 FGE +G+ FQL DD LD D Sbjct: 197 FGEKIGLAFQLQDDYLDVYGD 217 >gi|227828317|ref|YP_002830097.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25] gi|229585547|ref|YP_002844049.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27] gi|227460113|gb|ACP38799.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25] gi|228020597|gb|ACP56004.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27] Length = 331 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 11/223 (4%) Query: 13 SKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVN 68 S + + +D++ H++ + N R L + L GGK++R ++ + L + Sbjct: 2 SDELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGD 61 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG+ L AF Sbjct: 62 RQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAF 119 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGA 187 E ++ L + + ++I + + GQ +D+ E +D T+ +Q +K Sbjct: 120 EALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEYVQMIKGKT 177 Query: 188 LMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 M F+C + G I+ AS + + L +G NLGI FQ+ DD+L Sbjct: 178 AMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDIL 220 >gi|323478112|gb|ADX83350.1| Farnesyltranstransferase [Sulfolobus islandicus HVE10/4] Length = 331 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 11/223 (4%) Query: 13 SKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVN 68 S + + +D++ H++ + N R L + L GGK++R ++ + L + Sbjct: 2 SDELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGD 61 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG+ L AF Sbjct: 62 RQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAF 119 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGA 187 E ++ L + + ++I + + GQ +D+ E +D T+ +Q +K Sbjct: 120 EALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEYVQMIKGKT 177 Query: 188 LMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 M F+C + G I+ AS + + L +G NLGI FQ+ DD+L Sbjct: 178 AMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDIL 220 >gi|319903089|ref|YP_004162817.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108] gi|319418120|gb|ADV45231.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108] Length = 324 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 75/221 (33%), Positives = 121/221 (54%), Gaps = 18/221 (8%) Query: 22 DLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 ++L + SH+ T+ L + + Y L +GGK+IR L+ +L+ + + A Sbjct: 6 EILKKINSHIADLKFTRTPQGLYAPVSYVLSMGGKRIRPVLMLMSYNLYKEDIVRAYGPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PK 135 IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A++ ++ P Sbjct: 66 IGIEVYHNYTLLHDDL--MDCADRRRGKKTVHKVWNDNTAILSGDAMLVLAYQYMAQCPA 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 LK+ + + SLT L+ + GQ +D++ E + E + + ++KT L+ + Sbjct: 124 GYLKEVMD---LFSLT---ALE-ICEGQQMDMEFELRKDVKEGEYLEMIRLKTSVLLAAS 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA++ AS + E L FG NLGI FQL DDLLD D Sbjct: 177 LKIGALLGGASAEDAEHLYNFGMNLGIAFQLKDDLLDVYGD 217 >gi|329957776|ref|ZP_08298251.1| polyprenyl synthetase [Bacteroides clarus YIT 12056] gi|328522653|gb|EGF49762.1| polyprenyl synthetase [Bacteroides clarus YIT 12056] Length = 324 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L +GGK+IR L+ +L+ N A IE H Y+L+HDDL MD Sbjct: 27 LYDPITYVLSMGGKRIRPVLMLMAYNLYKENVEPAFSSATGIEVYHNYTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 RRGK TVH +++ AI++G+ +L A++ ++ P LK+ + + SLT Sbjct: 85 ADKRRGKETVHKVWNDNAAILSGDAMLVLAYQFMAQCPVKHLKEVMD---LFSLTAF--- 138 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ +D++ E + E + + ++KT L+ + + GA++ AS ++ RL F Sbjct: 139 -EICEGQQMDMEFEQRNDVKEEEYLEMIRLKTSVLLAASLKIGALLGGASADDAARLYDF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G N+G+ FQL DDLLD D Sbjct: 198 GMNMGVAFQLKDDLLDVYGD 217 >gi|1842242|gb|AAC44848.1| geranylgeranyl synthase [Flavobacterium sp. ATCC 21588] Length = 295 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 2/188 (1%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 AL GK+ R+ L+ A + A+E +H SLI DD+P MD+ RRG+P Sbjct: 39 ALSPGKRFRAVLMLMVAESSGGVCDAMVDAACAVEMVHAASLIFDDMPCMDDARTRRGQP 98 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 H+ + E A++AG L+T A I+ + D R++L+ S++ +G G+ GQ L Sbjct: 99 ATHVAHGEGRAVLAGIALITEAMRILGEARGATPDQ-RARLVASMSRAMGPVGLCAGQDL 157 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D+ D + Q +KTG L E +I+ + E E+L FG LG +FQ D Sbjct: 158 DLHAPK-DAAGIEREQDLKTGVLFVAGLEMLSIIKGLDKAETEQLMAFGRQLGRVFQSYD 216 Query: 226 DLLDCEED 233 DLLD D Sbjct: 217 DLLDVIGD 224 >gi|253570683|ref|ZP_04848091.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251839632|gb|EES67715.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 324 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 122/221 (55%), Gaps = 16/221 (7%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 +LD + + + T+ + L I Y L LGGK+IR L+ +L+ + + Sbjct: 7 LLDKINNHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPAT 66 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPK 135 IE H ++L+HDDL MD +RRGKPTVH +++ TAI++G+ +L AF ++ +P+ Sbjct: 67 GIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAPE 124 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 LK+ I + SLT L+ + GQ LD++ E + E + + ++KT L+ + Sbjct: 125 -HLKEVID---LFSLT---ALE-ICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAAS 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GAI+A AS + E L FG +G+ FQL DDLLD D Sbjct: 177 LKIGAILAGASAVDAENLYNFGMQIGVAFQLQDDLLDVYGD 217 >gi|195977755|ref|YP_002122999.1| geranyltranstransferase LepA [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974460|gb|ACG61986.1| geranyltranstransferase LepA [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 289 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 103/200 (51%), Gaps = 14/200 (7%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--VGAAIECIHCYSLIHDDLPSMD 96 L AI Y++ GG K L+ LT + AAIE IH SLIHDDLP+MD Sbjct: 25 LEEAILYSVDGGGKRLRPLILLELLEGFGLALTDAHYAIAAAIEMIHTGSLIHDDLPAMD 84 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRG+ T H Q+DE TAI+AG+ L F +I+ L ++ QL+ + G Sbjct: 85 NDDYRRGRLTSHKQFDEATAILAGDSLFLDPFALIAG--ADLPADLLVQLIQQFSLASGT 142 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEKERL 210 GM+GGQ+LD++ E Q+ IQ++ KTG L+ + I+A S + L Sbjct: 143 FGMVGGQLLDMK----GEQQLLNIQELSDIHANKTGKLLTLPFVAAGIIAEQSADVLSCL 198 Query: 211 RCFGENLGIIFQLADDLLDC 230 G +G FQ+ DD+LD Sbjct: 199 WEAGRLVGQAFQIRDDILDV 218 >gi|265766878|ref|ZP_06094707.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263253255|gb|EEZ24731.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 324 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 113/200 (56%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I+Y L +GGK+IR L+ +L+ + + AIE H Y+L+HDDL MD Sbjct: 27 LYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPATAIEVYHNYTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156 +RRGK TVH +++ TAI++G+ +L A++ +++ ++ LK+ + + SLT L Sbjct: 85 ADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLKEVMD---LFSLT---AL 138 Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + + GQ +D+ E + E + + ++KT L+ + + GAI+ AS + E L F Sbjct: 139 E-ICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASPEDAENLYDF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G +G+ FQL DDLLD D Sbjct: 198 GMQIGVAFQLQDDLLDVYGD 217 >gi|253566127|ref|ZP_04843581.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251945231|gb|EES85669.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 324 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 113/200 (56%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I+Y L +GGK+IR L+ +L+ + + AIE H Y+L+HDDL MD Sbjct: 27 LYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPATAIEVYHNYTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156 +RRGK TVH +++ TAI++G+ +L A++ +++ ++ LK+ + + SLT L Sbjct: 85 ADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLKEVMD---LFSLT---AL 138 Query: 157 QGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + + GQ +D+ E + E + + ++KT L+ + + GAI+ AS + E L F Sbjct: 139 E-ICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASPEDAENLYDF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G +G+ FQL DDLLD D Sbjct: 198 GMQIGVAFQLQDDLLDVYGD 217 >gi|53715029|ref|YP_101021.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46] gi|52217894|dbj|BAD50487.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46] gi|301164456|emb|CBW24014.1| putative isoprenoid biosynthesis related protein [Bacteroides fragilis 638R] Length = 324 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 113/200 (56%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I+Y L +GGK+IR L+ +L+ + + AIE H Y+L+HDDL MD Sbjct: 27 LYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPATAIEVYHNYTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156 +RRGK TVH +++ TAI++G+ +L A++ +++ ++ LK+ + + SLT L Sbjct: 85 ADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLKEVMD---LFSLT---AL 138 Query: 157 QGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + + GQ +D+ E + E + + ++KT L+ + + GAI+ AS + E L F Sbjct: 139 E-ICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASPEDAENLYDF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G +G+ FQL DDLLD D Sbjct: 198 GMQIGVAFQLQDDLLDVYGD 217 >gi|332300739|ref|YP_004442660.1| Polyprenyl synthetase [Porphyromonas asaccharolytica DSM 20707] gi|332177802|gb|AEE13492.1| Polyprenyl synthetase [Porphyromonas asaccharolytica DSM 20707] Length = 334 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%) Query: 39 LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L + IRY L G K++R L + A A+E H ++L+HDD+ MD Sbjct: 34 LYAPIRYTLEQEGAKRVRPVLALLMQAYLRPEAPLAASPIVALEVFHNFTLLHDDV--MD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKP+V+ +Y AI++G+ +L A+++++ + + +++ L N Sbjct: 92 NSPVRRGKPSVYAKYGLTPAILSGDAMLILAYQMLT-------EGVSPEMLPDLIQNFNK 144 Query: 157 QGML--GGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 L GQ LD++ E ++ + Q + KT L+ A GAI++ S E E Sbjct: 145 MATLIMEGQQLDLEYEQLDYVSKEQYLEMIGYKTAVLIATATRFGAILSKGSVTELESSY 204 Query: 212 CFGENLGIIFQLADDLLDCEED 233 FG NLG+ FQL DD LD D Sbjct: 205 AFGWNLGLAFQLQDDYLDLYGD 226 >gi|188994672|ref|YP_001928924.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277] gi|188594352|dbj|BAG33327.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277] Length = 325 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 12/201 (5%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L I Y L LGGK++R L +F ++ AL V AIE H ++L+HDDL M Sbjct: 26 DGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPALEVAMAIETYHNFTLLHDDL--M 83 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D +RRGK TVH ++ + TAI++G+ + A+E ++ ++L ++L L + + Sbjct: 84 DKSSMRRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDSRL-----LPVLLPLFNRMA 138 Query: 156 LQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 ++ + GQ D+ E F+ E + + ++KT L+ A + GAI A + + L Sbjct: 139 ME-ICQGQQYDMDFERRDFVAEDEYLEMIRLKTAVLLATALKMGAIAGGADIEKADILYR 197 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G ++G+ FQL DDLLD D Sbjct: 198 YGIHIGLSFQLEDDLLDVYGD 218 >gi|160901676|ref|YP_001567257.1| polyprenyl synthetase [Petrotoga mobilis SJ95] gi|160359320|gb|ABX30934.1| Polyprenyl synthetase [Petrotoga mobilis SJ95] Length = 288 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 109/198 (55%), Gaps = 15/198 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +++ + ++N + + A+E +H SLIHDDLP++DN +RRG T H Sbjct: 41 GGKRLRPWIIYNFGQIISINKKNLIDIAIAVEILHSSSLIHDDLPALDNAKLRRGALTTH 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLD 166 +++ E AI+AG+ T +I++ DNI+ ++L+L + + G+M D Sbjct: 101 LKFGEYKAILAGDYGFTLPLQIVAGL-----DNIKEGNKLLLVDYFIKTILKLFQGEMED 155 Query: 167 I----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + +D+ + E ++ + KTGA+ F S +MA ++ KE + G + G+ FQ Sbjct: 156 LIFEKEDKNVGEKEILEMYSKKTGAVFGFCFASPFLMAGEAELAKE-MNKIGTDFGVSFQ 214 Query: 223 LADDLLDC---EEDLPKK 237 + DDL D EED+ K+ Sbjct: 215 IFDDLKDIFTKEEDIGKE 232 >gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata] gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata] Length = 329 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 23/200 (11%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ A+RY+LL GGK++R L L AL A+E IH SLIHDDLP Sbjct: 77 KIHEAMRYSLLAGGKRVRPVLCIAACELVGGEEFLALPAACAVEMIHTMSLIHDDLPF-- 134 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIG 155 + E A++AG+ LL++AFE +++ ++ R + + L IG Sbjct: 135 --------------FGEDVAVLAGDALLSFAFEHLATETPEIISPARVVRAIGELAKAIG 180 Query: 156 LQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERL 210 +G++ GQ++D+ E +D+ V + I KT L+ A GAI + E ERL Sbjct: 181 SEGLVAGQVVDLTSEGMDQNDVGLELLEFIHLHKTAVLLEAATVLGAIFGGGTNEEIERL 240 Query: 211 RCFGENLGIIFQLADDLLDC 230 R F +G++FQ+ DD+LD Sbjct: 241 RKFARCIGLLFQVVDDILDV 260 >gi|77919267|ref|YP_357082.1| geranyltranstransferase [Pelobacter carbinolicus DSM 2380] gi|77545350|gb|ABA88912.1| farnesyl-diphosphate synthase [Pelobacter carbinolicus DSM 2380] Length = 296 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 80/234 (34%), Positives = 121/234 (51%), Gaps = 10/234 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63 L + L+E ++D LD L + H A+RY+ GK+IR L+ Sbjct: 3 LNAYLKERRAQVDKALDTYLPGEDVLPISLHK-----AMRYSTFAAGKRIRPILMMAACE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + A+E IH YSLIHDDLP+MD+ RRG+PT H Y + AI+AG+ L Sbjct: 58 AVGGTVDKVMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKVYGDALAILAGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLS--LTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LT AF ++S ++ + +S + G GM+GGQ++D+ E ID + Sbjct: 118 LTEAFILLSRLGEDGGVSLEAARRVSADIARCAGSMGMVGGQVVDMDSEGKEIDLATLEY 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I KTGAL+ + +SGA++ AS + + L + + G+ FQ+ADD+LD D Sbjct: 178 IHTRKTGALILASVQSGAVLGGASSEQVDNLGRYAKAAGLAFQVADDILDIVGD 231 >gi|34540567|ref|NP_905046.1| polyprenyl synthetase [Porphyromonas gingivalis W83] gi|34396880|gb|AAQ65945.1| polyprenyl synthetase [Porphyromonas gingivalis W83] Length = 325 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 12/201 (5%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L I Y L LGGK++R L +F ++ AL V AIE H ++L+HDDL M Sbjct: 26 DGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPALEVAMAIETYHNFTLLHDDL--M 83 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D +RRGK TVH ++ + TAI++G+ + A+E ++ ++L ++L L + + Sbjct: 84 DKSSMRRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDSRL-----LPVLLPLFNRMA 138 Query: 156 LQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 ++ + GQ D+ E F+ E + + ++KT L+ A + GAI A + + L Sbjct: 139 ME-ICQGQQYDMDFERRDFVAEDEYLEMIRLKTAVLLATALKMGAIAGGADIEKADILYR 197 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G ++G+ FQL DDLLD D Sbjct: 198 YGIHIGLSFQLEDDLLDVYGD 218 >gi|47531118|gb|AAT35222.1| fusion of carotene synthesis proteins [synthetic construct] Length = 1798 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 2/194 (1%) Query: 40 LSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 L A AL GK+ R L+ A T + A+E +H SLI DDLP MD+ Sbjct: 355 LGAAMAALSSGKRFRGMLMLLAAEASGGVCDTIVDAACAVEMVHAASLIFDDLPCMDDAG 414 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+P H+ + E A++ G L+T A +++ + +R+QL+ L+ ++G QG+ Sbjct: 415 LRRGQPATHVAHGESRAVLGGIALITEAMALLAGARGA-SGTVRAQLVRILSRSLGPQGL 473 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 GQ LD+ + V Q +KTG L E A++ E+ ++ FG LG Sbjct: 474 CAGQDLDLHAA-KNGAGVEQEQDLKTGVLFIAGLEMLAVIKEFDAEEQTQMIDFGRQLGR 532 Query: 220 IFQLADDLLDCEED 233 +FQ DDLL+ D Sbjct: 533 VFQSYDDLLEVVGD 546 >gi|228474123|ref|ZP_04058864.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624] gi|228274637|gb|EEK13478.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624] Length = 323 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 16/208 (7%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 H++ + L I Y L +GGK++R L A +F ++ AL A+E H +SL Sbjct: 17 EHLKERDPKNLYDPIHYILNVGGKRLRPTLTMLSADIFGTDYHKALYAALAVEIFHNFSL 76 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ MD +RRG PTVH +++ T I++G+ +L A++ Q + NI +L Sbjct: 77 VHDDI--MDAAPLRRGHPTVHTKWNLNTGILSGDTMLILAYQYFE----QYEPNIFQELA 130 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK-----TGALMCFACESGAIMAHA 202 + ++ + GQ D+ +F + QV Q +K T L+ A + GAI+A Sbjct: 131 -KIFSKTAIE-VCEGQQYDV--DFEQQAQVSTDQYLKMIAYKTAVLVGAALQMGAIIAQT 186 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230 ++ K+++ FG LGI +QL DD LD Sbjct: 187 TEENKQKIYDFGLALGIAYQLQDDYLDT 214 >gi|326335315|ref|ZP_08201510.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692586|gb|EGD34530.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 323 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 16/220 (7%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 ++ L H + L I Y L +GGK++R L A++F ++ AL A+ Sbjct: 9 NEFLAFMKEHFVEREPKSLYDPIHYILNVGGKRLRPTLTMLSANIFGEDYHKALYAALAV 68 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E H +SL+HDD+ MD +RRG+PTVH +++ T I++G+ +L A++ Q + Sbjct: 69 EIFHNFSLVHDDI--MDEASLRRGQPTVHTKWNLNTGILSGDTMLILAYQYFE----QYE 122 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK-----TGALMCFACE 194 NI +L + ++ + GQ D+ +F E QV Q +K T L+ A + Sbjct: 123 PNIFQELA-KIFSKTAIE-VCEGQQYDV--DFEKEVQVSTDQYLKMIAYKTAVLIGAALK 178 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 GAI+A ++ K+++ FG LGI +QL DD LD D+ Sbjct: 179 MGAIIAQTTEENKQQIYDFGLALGIAYQLQDDYLDTFGDV 218 >gi|323140954|ref|ZP_08075866.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067] gi|322414557|gb|EFY05364.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067] Length = 291 Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 108/197 (54%), Gaps = 12/197 (6%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+L+ GGK+IR L+ A L V +E IH YSLIHDDLP MD+ Sbjct: 33 AMEYSLMAGGKRIRPILLMAAAEAVGSKGYNYLPVACGLEMIHTYSLIHDDLPCMDDDDY 92 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GL 156 RRG+ T H + E A++AG+GLLT AFE++ K N+ ++++ + G Sbjct: 93 RRGRLTNHKVFGEAMAVLAGDGLLTLAFEVMLEQK-----NVDPKVLIETVREMAMCAGN 147 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ LD++ E I ++ + KTGAL A GA +A A+ + L F Sbjct: 148 FGMVGGQGLDLEFEGKKITPEELRKLHAGKTGALFIAAIRGGAHLAGANDQQLLALTKFA 207 Query: 215 ENLGIIFQLADDLLDCE 231 + LG+ FQ+ DD+LD E Sbjct: 208 DLLGLAFQITDDILDVE 224 >gi|298372651|ref|ZP_06982641.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058] gi|298275555|gb|EFI17106.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058] Length = 318 Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 107/195 (54%), Gaps = 12/195 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L GGK++R LV +F + T AIE H ++L+HDDL MD+ Sbjct: 21 LYKPIEYTLDSGGKRLRPMLVAIACEMFGKSSETVENAAVAIEIFHNFTLLHDDL--MDD 78 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RR KPTVH++++ TAI++G+ +L A+E ++ ++ + ++++ T L+ Sbjct: 79 SPTRRNKPTVHVKWNANTAILSGDAMLIKAYEFLA----KIPEKYWAKVLPVFTQT-ALE 133 Query: 158 GMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ D+ E D + F + ++KT L+ + ++GAI+A AS+ ++ + G Sbjct: 134 -VCEGQQFDMDFETKDNVTIDEYFRMIRLKTAVLLACSLKTGAIIADASERDQRLIYDLG 192 Query: 215 ENLGIIFQLADDLLD 229 +G+ FQL DD LD Sbjct: 193 IAIGMAFQLKDDYLD 207 >gi|148653898|ref|YP_001280991.1| polyprenyl synthetase [Psychrobacter sp. PRwf-1] gi|148572982|gb|ABQ95041.1| farnesyl-diphosphate synthase [Psychrobacter sp. PRwf-1] Length = 311 Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 118/209 (56%), Gaps = 24/209 (11%) Query: 42 AIRYALLG-GKKIRSFLV-----TECAS----------LFNVNHLTALRVGAAIECIHCY 85 A YA+ G GKK+R LV T AS LF+ N R A+E +H Y Sbjct: 39 ACHYAMTGQGKKVRPLLVASSYLTVLASSQAATIDTLPLFDDN---CRRAMLAVEFLHTY 95 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIR 143 SLIHDDLP MD+ +RRG+PT HI++ E TA++AG+ L T AFE +S+ P N + Sbjct: 96 SLIHDDLPCMDDDDLRRGRPTCHIKFGEATALLAGDVLQTLAFEALSADLPGFAPISNDK 155 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 + +L+L + M+ GQMLD+ +++ + + Q+ I + KTGAL+ A GA A Sbjct: 156 AASLLTLFAPRA-RRMVSGQMLDLNAENKQVSQPQLEAIHRDKTGALIEAAVLMGAACAD 214 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDC 230 A+ + + + F N+G+ FQ+ DD+LD Sbjct: 215 ANDTQYQAITSFASNVGLAFQVQDDILDV 243 >gi|168484957|ref|ZP_02709902.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC1873-00] gi|168493127|ref|ZP_02717270.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC3059-06] gi|221231906|ref|YP_002511058.1| geranyltranstransferase [Streptococcus pneumoniae ATCC 700669] gi|225854677|ref|YP_002736189.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae JJA] gi|172041911|gb|EDT49957.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC1873-00] gi|183576658|gb|EDT97186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC3059-06] gi|220674366|emb|CAR68915.1| putative geranyltranstransferase [Streptococcus pneumoniae ATCC 700669] gi|225722931|gb|ACO18784.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae JJA] Length = 291 Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q+ I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQI--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|171702409|dbj|BAG16276.1| geranylgeranyl diphosphate synthase [Nocardia brasiliensis] Length = 332 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 17/202 (8%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 DRL + RYA+ GK +R L+ E A+ + + + A+E +H +L+HDD+ Sbjct: 31 GDRLDAVTRYAVQPPGKLVRPVLLVESAAAVGADPADLVPIAVALEYLHVATLVHDDI-- 88 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS------PKTQLKDNIR--SQL 146 +D +RRG+PTVH +Y AI+AG+ LL F ++ P + + +R + Sbjct: 89 IDGDLLRRGRPTVHARYGRDEAIVAGDALLLDTFRTLTEAAELGFPPAAVLEAVRIVAVA 148 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L L ++ L G D + + + +KTGAL AC +GA++ S E Sbjct: 149 GLDLCRGQAMEAGLAG------DLYCGMARYRTMAGLKTGALFIAACAAGAVLGGGSGEE 202 Query: 207 KERLRCFGENLGIIFQLADDLL 228 LR F ++LG FQ+ DDLL Sbjct: 203 VRALRSFADHLGCAFQMRDDLL 224 >gi|161527820|ref|YP_001581646.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1] gi|160339121|gb|ABX12208.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1] Length = 326 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 11/192 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++V + A+ +A+E +H ++L+HDD+ MDN +R G PT H Sbjct: 40 GGKRLRPYMVIRSCQILGGKSSNAMPAASAVEMVHNFTLVHDDI--MDNDEMRHGVPTTH 97 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 +Y AI+AG+ L + A+++IS T+L + L+ L + GQ+LD+ Sbjct: 98 RKYGMPIAILAGDVLFSKAYQVISD--TKLSPTATTHLISRLAK--ACVDVCEGQLLDVK 153 Query: 168 ---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + ++Q + KT AL +C GAI A + L FG NLGI FQ+ Sbjct: 154 MAEEKKIPTQSQYITMIGKKTAALFDVSCAMGAICATNKGKDISNLSSFGRNLGIAFQIT 213 Query: 225 DDLLDCEEDLPK 236 DDL+ D PK Sbjct: 214 DDLIGVMGD-PK 224 >gi|313204536|ref|YP_004043193.1| polyprenyl synthetase [Paludibacter propionicigenes WB4] gi|312443852|gb|ADQ80208.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4] Length = 325 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 109/200 (54%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L +LF+ + +A+ IE H ++L+HDD+ MD Sbjct: 27 LYEPIGYVLSLGGKRIRPALTLMACNLFSDDVQSAMNTALGIEIFHNFTLLHDDI--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+PTVH ++D+ TAI++G+ + +++ ++ +P+ LK L L Sbjct: 85 ADVRRGRPTVHKKWDDNTAILSGDVMQIASYQFVTKTPEKYLKKT------LDLFSKTAA 138 Query: 157 QGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + + GQ D+ E D+ + + ++KT L+ A ++GA + A + + + L F Sbjct: 139 E-ICEGQQYDVDFESRDDVKADEYLEMIRLKTAVLLGAALQTGAWIGGAGEEDAQLLYDF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G N+G+ FQL DDLLD D Sbjct: 198 GINIGLAFQLKDDLLDVYGD 217 >gi|225870049|ref|YP_002745996.1| geranyltranstransferase [Streptococcus equi subsp. equi 4047] gi|225699453|emb|CAW92957.1| putative geranyltranstransferase [Streptococcus equi subsp. equi 4047] Length = 289 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 71/192 (36%), Positives = 101/192 (52%), Gaps = 6/192 (3%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALR--VGAAIECIHCYSLIHDDLPSMDNGY 99 AI Y++ GG K L+ LT V AA+E IH SLIHDDLP+MDN Sbjct: 28 AILYSVDGGGKRLRPLMLLELLEGFGLALTDAHYAVAAAVEMIHTGSLIHDDLPAMDNDD 87 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRG+ T H Q++E TAI+AG+ L F +I+ L ++ QL+ + G GM Sbjct: 88 YRRGRLTSHKQFNEATAILAGDSLFLDPFALIAG--ADLPADLLVQLIQQFSLASGTFGM 145 Query: 160 LGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 +GGQ+LD++ E +D ++ I KTG L+ + I+A S + L G + Sbjct: 146 VGGQLLDMKGEHQLLDIQELSDIHANKTGKLLTLPFVAAGIIAEQSADVLSCLWEAGRLV 205 Query: 218 GIIFQLADDLLD 229 G FQ+ DD+LD Sbjct: 206 GQAFQIRDDILD 217 >gi|307709372|ref|ZP_07645830.1| putative geranyltranstransferase [Streptococcus mitis SK564] gi|307619955|gb|EFN99073.1| putative geranyltranstransferase [Streptococcus mitis SK564] Length = 291 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 126/229 (55%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E + Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALH 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYVMIA--QADLPSQIKVDLIANLSFASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEVQAKLKTVGELIGLAFQVRDDVLDV 220 >gi|327400499|ref|YP_004341338.1| polyprenyl synthetase [Archaeoglobus veneficus SNP6] gi|327316007|gb|AEA46623.1| Polyprenyl synthetase [Archaeoglobus veneficus SNP6] Length = 319 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 114/206 (55%), Gaps = 11/206 (5%) Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86 + ++ + + L +A R+ + GGK++R + A + + + AIE IH ++ Sbjct: 19 SEYLPVKEPEGLYNAARHLINAGGKRLRPVMCLISAEAVGGDVESVIPAAVAIETIHNFT 78 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 LIHDD+ MD +RRG PTVH+ YDE TAI+AG+ L AF+I+SS + ++ +++ Sbjct: 79 LIHDDI--MDRDELRRGVPTVHVAYDEPTAILAGDTLFAEAFKILSSCNVEAENLVKASR 136 Query: 147 MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 ML+ ++ ++ + GQ LD+ + E I E++ + + KT L+ AC A++ Sbjct: 137 MLA---DVCIE-ICEGQYLDMSFEKREKISESEYLEMVRKKTAVLIASACAMPAVLFGMD 192 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229 K L FG GI FQ+ DD+LD Sbjct: 193 SYAK-ALWNFGIYSGIGFQIHDDVLD 217 >gi|254501471|ref|ZP_05113622.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] gi|222437542|gb|EEE44221.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] Length = 289 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 18/226 (7%) Query: 13 SKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALL-GGKKIRSFLVTECA-SLFNVN 68 S RI+T + QTA T + +L A++YA+ GG +IR L + + + + Sbjct: 4 SDRIETGM-----QTAIRYATANGCPQKLGKALKYAVFPGGARIRPRLCLAVSQACGDKD 58 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A AIE +HC SL+HDDLP DN RRGKP+VH +Y E A++ G+GL+ AF Sbjct: 59 PRVANACATAIELLHCASLVHDDLPCFDNAATRRGKPSVHKEYGEEIALLVGDGLIVTAF 118 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E ++ + ++L+ ++ + +G G++ GQ + +++ + + KT + Sbjct: 119 ETLARETLHAPEQT-ARLVATIANAVGSPYGIVAGQAWESEEKI----NITAYHRAKTAS 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A +GA+ ++ + + + LG +Q+ADDL D +D Sbjct: 174 LFTGAVSAGALSSYGNPLD---WYALADALGAAYQVADDLYDAMDD 216 >gi|62959237|gb|AAY23726.1| farnesyl diphosphate synthase [Bacillus sp. JL-537] Length = 145 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 4/146 (2%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP++ +RRGKPT H Y E I+AG+ LL+YAFE ++ + + Q+++ Sbjct: 1 HDDLPALQVDDLRRGKPTNHKVYGEDITILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205 L +G +G++GGQ+ D++ E + V I KTGAL+ +GA++A A Sbjct: 60 RLGQAVGAEGLVGGQVADLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 E + L + +N+G+ FQ+ DD+LD E Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145 >gi|323475387|gb|ADX85993.1| farnesyltranstransferase [Sulfolobus islandicus REY15A] Length = 331 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 117/220 (53%), Gaps = 11/220 (5%) Query: 16 IDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT 71 + + +D++ H++ + N R L + L GGK++R ++ + L + Sbjct: 5 LSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDRQR 64 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG+ L AFE + Sbjct: 65 AYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEAL 122 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGALMC 190 + L + + ++I + + GQ +D+ E +D T+ +Q +K M Sbjct: 123 NEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEYVQMIKGKTAML 180 Query: 191 FACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 F+C + G I+ AS + + L +G NLGI FQ+ DD+L Sbjct: 181 FSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDIL 220 >gi|307706648|ref|ZP_07643455.1| geranyltranstransferase [Streptococcus mitis SK321] gi|307618103|gb|EFN97263.1| geranyltranstransferase [Streptococcus mitis SK321] Length = 291 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLALEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEMQAKLKTVGELIGLAFQVRDDVLDV 220 >gi|315613297|ref|ZP_07888206.1| geranyltranstransferase [Streptococcus sanguinis ATCC 49296] gi|315314532|gb|EFU62575.1| geranyltranstransferase [Streptococcus sanguinis ATCC 49296] Length = 291 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYSLIA--QADLPSQIKVNLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDV 220 >gi|255520793|ref|ZP_05388030.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL J1-175] Length = 157 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 4/147 (2%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 ++D+ L + S + RL ++ Y++ GGK+IR LV VN L ++ Sbjct: 14 VIDESLFKEISERNIE--PRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTAT 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I++ + Sbjct: 72 ALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDE-N 130 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQM 164 L R L+ ++ + G +GM+GGQ+ Sbjct: 131 LSFETRIALINQISFSSGAEGMVGGQL 157 >gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays] gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays] Length = 361 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 113/206 (54%), Gaps = 16/206 (7%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RYALL GGK++R L ++ A+ AA+E +H SL+HDDLP MD+ + Sbjct: 92 AMRYALLAGGKRVRPALCLAACAVVGGPESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDL 151 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLT 151 RRGKPT H+ Y E A++AG+ LL+ +F ++S P+ +R+ + L Sbjct: 152 RRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPAVDPEKHPARVVRA--IGELA 209 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEK 207 IG +G++ GQ++D++ +T I KT AL+ + GAI+ + + Sbjct: 210 RCIGSEGLVAGQVVDLEMTGTSQTVPLELLEYIHLHKTAALLEASVVIGAIIGGGTDEQI 269 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 E LR + ++G++FQ+ DD+LD + Sbjct: 270 EALRKYARSIGLLFQVVDDILDVTKS 295 >gi|218128733|ref|ZP_03457537.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697] gi|217989188|gb|EEC55503.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697] Length = 324 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + Y L +GGK+IR L+ +L+ + + IE H Y+L+HDDL MD Sbjct: 27 LYDPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPATGIEVYHNYTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 RRGK TVH +++ AI++G+ +L A++ ++ P LK+ + + SLT L Sbjct: 85 ADKRRGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPVGHLKEVMD---LFSLT---AL 138 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + + GQ +D++ E + E + + ++KT L+ + + GA++ AS + ERL F Sbjct: 139 E-ICEGQQMDMEFERRNDVKEEEYLEMIRLKTSVLLAASLKIGALLGGASAEDAERLYDF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G N+G+ FQL DDLLD D Sbjct: 198 GVNMGVAFQLKDDLLDVYGD 217 >gi|15232010|ref|NP_189747.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75263903|sp|Q9LHR4|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12, chloroplastic; Short=GGPP synthase 12; Short=GGPS12; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12; AltName: Full=Dimethylallyltranstransferase 12; AltName: Full=Farnesyl diphosphate synthase 12; AltName: Full=Farnesyltranstransferase 12; AltName: Full=Geranyltranstransferase 12; Flags: Precursor gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana] gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana] Length = 360 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 11/200 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + TA+ A+E IH SLIHDDLP MD+ + Sbjct: 96 AVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADL 155 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H + E A++AG+ LL AFE ++SS + IRS + L IG + Sbjct: 156 RRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLVAPERMIRS--VTELAKAIGTK 213 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQ+ D+ + ++ V + I KT AL+ A GAI+ ++ E ++LR Sbjct: 214 GLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRK 273 Query: 213 FGENLGIIFQLADDLLDCEE 232 +G +G++FQ+ DD++D E Sbjct: 274 YGRCIGLLFQVVDDIIDVTE 293 >gi|15901068|ref|NP_345672.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4] gi|111657819|ref|ZP_01408536.1| hypothetical protein SpneT_02001001 [Streptococcus pneumoniae TIGR4] gi|148998635|ref|ZP_01826074.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70] gi|168577215|ref|ZP_02723024.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae MLV-016] gi|182684065|ref|YP_001835812.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14] gi|225860956|ref|YP_002742465.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae Taiwan19F-14] gi|298230892|ref|ZP_06964573.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254303|ref|ZP_06977889.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502796|ref|YP_003724736.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A] gi|303254296|ref|ZP_07340405.1| geranyltranstransferase [Streptococcus pneumoniae BS455] gi|303258839|ref|ZP_07344818.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293] gi|303261523|ref|ZP_07347470.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292] gi|303264193|ref|ZP_07350113.1| geranyltranstransferase [Streptococcus pneumoniae BS397] gi|303266176|ref|ZP_07352069.1| geranyltranstransferase [Streptococcus pneumoniae BS457] gi|303268097|ref|ZP_07353897.1| geranyltranstransferase [Streptococcus pneumoniae BS458] gi|307067855|ref|YP_003876821.1| geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae AP200] gi|14972686|gb|AAK75312.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4] gi|147755472|gb|EDK62520.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70] gi|182629399|gb|ACB90347.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14] gi|183577213|gb|EDT97741.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae MLV-016] gi|225727927|gb|ACO23778.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae Taiwan19F-14] gi|298238391|gb|ADI69522.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A] gi|301801934|emb|CBW34659.1| putative geranyltranstransferase [Streptococcus pneumoniae INV200] gi|302598790|gb|EFL65827.1| geranyltranstransferase [Streptococcus pneumoniae BS455] gi|302637103|gb|EFL67591.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292] gi|302639782|gb|EFL70238.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293] gi|302642314|gb|EFL72661.1| geranyltranstransferase [Streptococcus pneumoniae BS458] gi|302644346|gb|EFL74600.1| geranyltranstransferase [Streptococcus pneumoniae BS457] gi|302646005|gb|EFL76232.1| geranyltranstransferase [Streptococcus pneumoniae BS397] gi|306409392|gb|ADM84819.1| Geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae AP200] gi|327389445|gb|EGE87790.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA04375] Length = 291 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 ++ +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DSYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|317475481|ref|ZP_07934744.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA] gi|316908312|gb|EFV30003.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 324 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + Y L +GGK+IR L+ +L+ + + IE H Y+L+HDDL MD Sbjct: 27 LYDPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPATGIEVYHNYTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 RRGK TVH +++ AI++G+ +L A++ ++ P LK+ + + SLT L Sbjct: 85 ADKRRGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPVGHLKEVMD---LFSLT---AL 138 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + + GQ +D++ E + E + + ++KT L+ + + GA++ AS + ERL F Sbjct: 139 E-ICEGQQMDMEFERRNDVKEEEYLEMIRLKTSVLLAASLKIGALLGGASAEDAERLYDF 197 Query: 214 GENLGIIFQLADDLLDCEED 233 G N+G+ FQL DDLLD D Sbjct: 198 GVNMGVAFQLKDDLLDVYGD 217 >gi|15222767|ref|NP_175376.1| GGPS6 (geranylgeranyl pyrophosphate synthase 6); farnesyltranstransferase [Arabidopsis thaliana] gi|85540951|sp|O22043|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6, mitochondrial; Short=GGPP synthase 6; Short=GGPS6; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6; AltName: Full=Dimethylallyltranstransferase 6; AltName: Full=Farnesyl diphosphate synthase 6; AltName: Full=Farnesyltranstransferase 6; AltName: Full=Geranyltranstransferase 6; Flags: Precursor gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana] gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana] gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana] gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana] Length = 336 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 9/197 (4%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY LL GGK++R L L TA+ A+E IH SLI DDLP MD+ + Sbjct: 70 AMRYTLLPGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSL 129 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRGKPT H + E T+I+A N L + A + ++S + + + + +G +G+ Sbjct: 130 RRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGL 189 Query: 160 LGGQMLDIQDEFI------DETQVF-MIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 + GQ D+ E + DE + ++ KT L+ A GAIM S E ERL+ Sbjct: 190 VAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKS 249 Query: 213 FGENLGIIFQLADDLLD 229 + +G++FQ+ DD+LD Sbjct: 250 YARCVGLMFQVMDDVLD 266 >gi|307565038|ref|ZP_07627551.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A] gi|307346207|gb|EFN91531.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A] Length = 324 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 121/226 (53%), Gaps = 15/226 (6%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 +S +I +I+++ + A + + L I+Y L LGGK+IR L+ +++ + Sbjct: 3 SSDKIFSIINNYIATLAYDREPK---SLYEPIKYVLSLGGKRIRPVLMLLAYNMYKDDPE 59 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + L +E H Y+L+HDDL MD+ +RRG TVH +++ TAI++G+ +L AFE Sbjct: 60 SILNQACGLETYHNYTLLHDDL--MDSAPLRRGHQTVHEKWNANTAILSGDTMLVLAFER 117 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGA 187 I+ + +L L L+ + GQ LD++ E + E + + ++KT Sbjct: 118 ITRGNPSC-----LKALLDLFTVTALE-IGEGQQLDMEFEHRNDVTEAEYIEMIRLKTSV 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ A + GA++ +AS+ + L FGE +G+ FQL DD LD D Sbjct: 172 LLACALKMGAMLGNASEKDANNLYLFGEKIGLAFQLQDDYLDVYGD 217 >gi|194396799|ref|YP_002037809.1| geranyltranstransferase [Streptococcus pneumoniae G54] gi|194356466|gb|ACF54914.1| geranyltranstransferase [Streptococcus pneumoniae G54] Length = 291 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 ++ +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DSYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQXLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|153004002|ref|YP_001378327.1| polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5] gi|152027575|gb|ABS25343.1| Polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5] Length = 299 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 87/232 (37%), Positives = 124/232 (53%), Gaps = 17/232 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN- 66 +Q + + L+ L A + Q +RL+ AIRYALLGG K++R LV Sbjct: 13 IQSYLRSVTERLEPRLAALADERRGQGPERLVEAIRYALLGGGKRLRPALVLAACEAHGG 72 Query: 67 --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A+R A+E +H YSL+HDDLP+MD+ +RRG+PTVH YDE TA++ G+ L Sbjct: 73 DASDGSLAMRFAVALEAVHTYSLVHDDLPAMDDDDLRRGRPTVHKAYDEATAVLVGDALQ 132 Query: 125 TYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++++P+ + L L N L M+ GQ DIQ E + E +V + Sbjct: 133 SLAFRHLLAAPQPTA-----AALARLLAENAYL--MVEGQARDIQGEHARLAEAEVLELM 185 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTGAL+ A GA A A+ G LG+ FQ+ADDLLD D Sbjct: 186 RTKTGALLASAVAGGAACAGAAVEAVY---PIGLKLGLAFQIADDLLDLTAD 234 >gi|298206983|ref|YP_003715162.1| putative isoprenoid biosynthesis related protein [Croceibacter atlanticus HTCC2559] gi|83849617|gb|EAP87485.1| putative isoprenoid biosynthesis related protein [Croceibacter atlanticus HTCC2559] Length = 324 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 116/227 (51%), Gaps = 13/227 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 + I + + + S + + + L I Y L LGGK++R LV +F ++ Sbjct: 2 QEISSYREAFIAHMNSKVSVKEPENLYEPISYILNLGGKRLRPILVLMATEIFGEDYTKG 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L A+E H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +L A+++ Sbjct: 62 LDAALAVEVFHNFSLVHDDI--MDDAPLRRGKDTVHEKWDLNTGILSGDAMLINAYQLFE 119 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALM 189 + D + + L ++ + GQ DI E D+ + KM KT L+ Sbjct: 120 N-----YDGSTFKELAKLFTKTAIE-VCEGQQYDIDFETRDDVTIPEYLKMIEFKTAVLV 173 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + GAI+A+A + K+++ FG LG+ FQL DD LD D PK Sbjct: 174 GAALQMGAIVANAEDSCKDKIYEFGCLLGLAFQLQDDYLDAFGD-PK 219 >gi|332200654|gb|EGJ14726.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA41317] Length = 291 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 ++ +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DSYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|149008192|ref|ZP_01831697.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74] gi|225858990|ref|YP_002740500.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae 70585] gi|307127203|ref|YP_003879234.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B] gi|147760373|gb|EDK67353.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74] gi|225720031|gb|ACO15885.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae 70585] gi|306484265|gb|ADM91134.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B] gi|332074540|gb|EGI85014.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA17545] Length = 291 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 ++ +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DSYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 360 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 11/200 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK++R L L + TA+ A+E IH SLIHDDLP MD+ + Sbjct: 96 AVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADL 155 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGKPT H + E A++AG+ LL AFE ++SS + IRS + L IG + Sbjct: 156 RRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLVAPERMIRS--VTELAKAIGTK 213 Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQ+ D+ + ++ V + I KT AL+ A GAI+ ++ E ++LR Sbjct: 214 GLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRK 273 Query: 213 FGENLGIIFQLADDLLDCEE 232 +G +G++FQ+ DD++D E Sbjct: 274 YGRCIGLLFQVVDDIIDVTE 293 >gi|332829987|gb|EGK02615.1| hypothetical protein HMPREF9455_00865 [Dysgonomonas gadei ATCC BAA-286] Length = 326 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 111/200 (55%), Gaps = 14/200 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK++R L +L+ + + + AIE H ++L+HDDL MD Sbjct: 31 LFDPITYILSLGGKRVRPALALMSYNLYKEDVERVIPIALAIEVFHNFTLLHDDL--MDR 88 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPTVHI++++ TA+++G+ +L A+ EI + QL +L L Sbjct: 89 ADMRRGKPTVHIRWNDNTAVLSGDAMLIEAYKEIAKTDSEQL------PRVLDLFSETAT 142 Query: 157 QGMLGGQMLDIQ-DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + + GQ D++ ++ +D T + + ++KT L+ A + GAI+A A + + L F Sbjct: 143 E-ICCGQQYDMEFEQRLDVTIPEYLEMIRLKTAVLLGCALKEGAIVAGAPDADADNLYEF 201 Query: 214 GENLGIIFQLADDLLDCEED 233 G N+G+ FQL DDLLD D Sbjct: 202 GINVGLGFQLKDDLLDVYGD 221 >gi|331266229|ref|YP_004325859.1| farnesyl diphosphate synthase [Streptococcus oralis Uo5] gi|326682901|emb|CBZ00518.1| farnesyl diphosphate synthase [Streptococcus oralis Uo5] Length = 291 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 118/205 (57%), Gaps = 14/205 (6%) Query: 36 NDRLLSAIRYALL-----GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIH 89 + + S++R A+L GGK+IR FL+ E +V A +V AA+E IH SLIH Sbjct: 20 DQQFASSLREAVLYSIHAGGKRIRPFLLLEVLESLHVTIRPAHAQVAAALEMIHTGSLIH 79 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP+MD+ RRG+ T H ++ E AI+AG+ L + +I+ + L I+ L+ + Sbjct: 80 DDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDPYALIA--QADLPSQIKVDLIAN 137 Query: 150 LTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 L+ G GM+ GQ+LD++ E ++E Q I KTG L+ + ++ AI+A + Sbjct: 138 LSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IHANKTGKLLAYPFQAAAIIAELAPE 195 Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230 + +L+ GE +G+ FQ+ DD+LD Sbjct: 196 IQAKLKTVGELIGLAFQVRDDVLDV 220 >gi|270339768|ref|ZP_06005968.2| polyprenyl synthetase [Prevotella bergensis DSM 17361] gi|270333767|gb|EFA44553.1| polyprenyl synthetase [Prevotella bergensis DSM 17361] Length = 325 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 120/222 (54%), Gaps = 18/222 (8%) Query: 21 DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D++L + S ++ DR L ++Y L +GGK+IR L+ +L+ + + L Sbjct: 6 DEILQKINSFIEQLPYDRTPAALYEPVKYVLSMGGKRIRPTLMLLGYNLYKDDPESILMQ 65 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSP 134 +E H Y+L+HDDL MDN +RRG TVH +++ A+++G+ +L A++ ++ P Sbjct: 66 AVGLETYHNYTLLHDDL--MDNADLRRGHETVHKKWNANQAVLSGDSMLVLAYQRMMDCP 123 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191 +L + +L L L+ + GQ DI E + E + + ++KT L+ Sbjct: 124 VDKL------EKVLGLFTETALE-IGEGQQYDIDFEMRNDVSEDEYIEMIRLKTSVLLAC 176 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GAI+A AS ++ ++L FGE +G+ FQL DD LD D Sbjct: 177 ALKIGAILAGASPSDADKLYKFGEKMGLAFQLQDDYLDVYGD 218 >gi|45357608|ref|NP_987165.1| bifunctional short chain isoprenyl diphosphate synthase [Methanococcus maripaludis S2] gi|45047168|emb|CAF29601.1| bifunctional short chain isoprenyl diphosphate synthase [Methanococcus maripaludis S2] Length = 317 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 116/206 (56%), Gaps = 24/206 (11%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDD 91 + + +L A ++ LL GGK++R +L L + LT + A ++E IH Y+L+HDD Sbjct: 20 EKDTKLYGASKHLLLAGGKRVRPYLSI-LTYLLKKDELTEIMAPALSVELIHNYTLVHDD 78 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + MDN RRG PTVH Y E AI+AG+ L AFE +S+ ++D+ ++ +L + Sbjct: 79 I--MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSN----IEDSNKAHEVLKVL 132 Query: 152 HNIGLQGMLGGQMLDIQ--------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 ++ + GQ D++ DE+++ MI K KTGAL+ E GA+MA + Sbjct: 133 SKACVE-VCEGQTEDMEFEERFPTLDEYLE-----MISK-KTGALIVAPVEIGAVMADCT 185 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229 E+E L + + +G+ FQ+ DD+LD Sbjct: 186 PEEREALCNYAKRIGMTFQIQDDVLD 211 >gi|322375371|ref|ZP_08049884.1| geranyltranstransferase [Streptococcus sp. C300] gi|321279634|gb|EFX56674.1| geranyltranstransferase [Streptococcus sp. C300] Length = 291 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDV 220 >gi|307703537|ref|ZP_07640479.1| geranyltranstransferase [Streptococcus oralis ATCC 35037] gi|307622944|gb|EFO01939.1| geranyltranstransferase [Streptococcus oralis ATCC 35037] Length = 291 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLF 65 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E SL Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLK 55 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VVIQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKEFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLSSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQA--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELEPEIQAKLKTVGELIGLAFQVRDDVLDV 220 >gi|253578524|ref|ZP_04855796.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850842|gb|EES78800.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 295 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 115/197 (58%), Gaps = 6/197 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + A+ Y++L GGK++R L+ E LF+ A +E IH +SLIHDDLP++D+ Sbjct: 32 MAQAMNYSMLAGGKRLRPMLIRETYRLFDGKEEVVKPFMAGMEMIHTHSLIHDDLPALDD 91 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIG 155 RRG+ T H Y E +++G LL YA+E + + T+ +D + L + ++ G Sbjct: 92 DDYRRGRLTTHKVYGEAMGVLSGVALLNYAYETMFQAFALTKEQDRVIHALRV-VSQKTG 150 Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GMLGGQ +D++++ +++ + I + KT AL+ + +GAI+A A++ E + Sbjct: 151 IHGMLGGQSVDVENDGKPLEKEMLDYIYRNKTSALIEASMMTGAILAGANEQEVSAVEKA 210 Query: 214 GENLGIIFQLADDLLDC 230 N+G+ FQ+ DD+LD Sbjct: 211 AGNIGLAFQIQDDILDV 227 >gi|148257671|ref|YP_001242256.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1] gi|146409844|gb|ABQ38350.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1] Length = 289 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 108/199 (54%), Gaps = 11/199 (5%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSM 95 RL +A++ A+ G ++R L A+ + A G+AIE +HC SL+HDDLP Sbjct: 26 RLSAAMQAAVFPKGARVRPRLCHAVAAACGDDEPAATDAAGSAIELLHCASLVHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRG+P+VH + E A++AG+ L+ AF+ ++ K++ +QL+ ++ +G Sbjct: 86 DNAKLRRGRPSVHAAFGEPLAVLAGDALIVLAFQTLA--KSRCSPLRLAQLIATIGDAVG 143 Query: 156 L-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + G+ GQ + + E ID + + KTGAL FA + + A A E R G Sbjct: 144 VPHGIAAGQAWECEPE-IDLSH---YHRSKTGAL--FAAATVSGAAAAGHANPEAWRSLG 197 Query: 215 ENLGIIFQLADDLLDCEED 233 E +G +Q+ADD+ D D Sbjct: 198 EKIGEAYQVADDIRDAASD 216 >gi|293365584|ref|ZP_06612293.1| geranyltranstransferase [Streptococcus oralis ATCC 35037] gi|291315952|gb|EFE56396.1| geranyltranstransferase [Streptococcus oralis ATCC 35037] Length = 291 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLF 65 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E SL Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLK 55 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VVIQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKEFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLSSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELEPEIQAKLKTVGELIGLAFQVRDDVLDV 220 >gi|312867098|ref|ZP_07727308.1| geranyltranstransferase [Streptococcus parasanguinis F0405] gi|311097227|gb|EFQ55461.1| geranyltranstransferase [Streptococcus parasanguinis F0405] Length = 291 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 94/164 (57%), Gaps = 4/164 (2%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +V A+E IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L F +I+ Sbjct: 63 FQVAGALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDALFLDPFGMIA 122 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190 + + L D ++ L+L L+ G +GM+ GQ+LD++ E T ++ I KTG L+ Sbjct: 123 A--SALPDVVKVSLILELSDASGSRGMVAGQVLDMEGEHKQLTLAELQTIHANKTGRLLA 180 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + + ++ + + L+ G+ LG+ FQ+ DD+LD D Sbjct: 181 YPFIAAGLILELQADIAQLLKKIGKKLGLAFQVRDDILDLVADF 224 >gi|325846498|ref|ZP_08169413.1| putative geranyltranstransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481256|gb|EGC84297.1| putative geranyltranstransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 279 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 112/227 (49%), Gaps = 15/227 (6%) Query: 12 NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 N K D IL D ++ A + ++ L A+ YA GK+IR + E + + Sbjct: 5 NKKEFDRILNTDKKIIDQAMKEKFVGDNPLNEALVYASDSGKRIRPIVFLETCRMLLGDK 64 Query: 70 L--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L + ++E +H YSL+HDD+P MDN RRGK TVH ++ E AI+ G+ LL++A Sbjct: 65 LDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAILVGDSLLSFA 124 Query: 128 FEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQK 182 FE I L +I Q L L G GM+ GQ+ DI+ ++ + + + + K Sbjct: 125 FENI------LNLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSYILDVYK 178 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L A + + E+L + LG+ FQL DD+LD Sbjct: 179 NKTSRLFMAALMMAGLYCQLDDEKLEKLENYAYYLGMAFQLQDDILD 225 >gi|163753596|ref|ZP_02160719.1| putative isoprenyl synthetase [Kordia algicida OT-1] gi|161325810|gb|EDP97136.1| putative isoprenyl synthetase [Kordia algicida OT-1] Length = 324 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 16/201 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK++R L A +F + AL A+E H +SL+HDD+ MD+ Sbjct: 27 LYEPIIYILQLGGKRLRPVLTLMTAEIFGASPQKALDAALAVEVFHNFSLVHDDI--MDD 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGK TVH ++D T I++G+ +L A+ QL +N + + +L Sbjct: 85 APLRRGKETVHEKWDINTGILSGDAMLILAY--------QLFENYKGKTFRALAELFSKT 136 Query: 158 GM--LGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRC 212 + GQ DI E ++ + KM KT L+ A + GA++A AS+ + + + Sbjct: 137 AIEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLVGAAMKMGALVAEASEKDAQGIYD 196 Query: 213 FGENLGIIFQLADDLLDCEED 233 FG LG+ FQL DD LD D Sbjct: 197 FGRYLGLAFQLQDDYLDAYGD 217 >gi|88801902|ref|ZP_01117430.1| putative isoprenoid biosynthesis related protein [Polaribacter irgensii 23-P] gi|88782560|gb|EAR13737.1| putative isoprenoid biosynthesis related protein [Polaribacter irgensii 23-P] Length = 340 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 17/204 (8%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK+IR L + +F+ + AL A+E H ++L+HDD+ MD Sbjct: 43 LYEPIDYILKLGGKRIRPVLTLMVSDIFSGDFKKALPAALAVEVFHNFTLVHDDI--MDA 100 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKPTVH ++D I++G+ +L A++ + D+I + L L+ Sbjct: 101 APLRRGKPTVHEKWDTNRGILSGDAMLILAYQYFEN-----YDSIVFLKLAKLFSKTALE 155 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACESGAIMAHASQNEKERLRC 212 + GQ LD+ +F + V + + ++KT L+ A + GAI+A S + + Sbjct: 156 -VCDGQQLDV--DFETRSNVTIPEYINMIRLKTSVLVAAALKMGAIVAETSDENAQLIYD 212 Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236 FG NLG+ FQL DD LD D PK Sbjct: 213 FGLNLGLAFQLQDDYLDTFGD-PK 235 >gi|148989224|ref|ZP_01820604.1| GTP-binding protein LepA [Streptococcus pneumoniae SP6-BS73] gi|147925202|gb|EDK76281.1| GTP-binding protein LepA [Streptococcus pneumoniae SP6-BS73] Length = 291 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|63034220|gb|AAY28422.1| geranylgeranyl diphosphate synthase [Paracoccus haeundaensis] Length = 293 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 2/188 (1%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 AL G++ R L+ A T + A+E +H SLI DDLP MD+ +RRG+P Sbjct: 39 ALSSGRRFRGMLMLLAAEASGGVCDTIVDAACAVEMVHAASLIFDDLPCMDDAGLRRGRP 98 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 H+ + E A++ G L+T A +++ + +R+QL+ L+ ++G QG+ GQ L Sbjct: 99 ATHVAHGESRAVLGGIALITEAMALLAGARGA-SGTVRAQLVRILSRSLGPQGLCAGQDL 157 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D+ + V Q +KTG L E A++ E+ ++ FG LG +FQ D Sbjct: 158 DLH-AAKNGAGVEQEQDLKTGVLFIAGLEMLAVIKEFDAEEQTQMIDFGRQLGRVFQSYD 216 Query: 226 DLLDCEED 233 DLLD D Sbjct: 217 DLLDVVGD 224 >gi|78187619|ref|YP_375662.1| geranyltranstransferase [Chlorobium luteolum DSM 273] gi|78167521|gb|ABB24619.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Chlorobium luteolum DSM 273] Length = 330 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 109/197 (55%), Gaps = 16/197 (8%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + RY L G GK+IR FL + + N AL+V A+E +H ++L+HDD+ MD Sbjct: 35 LYAPARYILEGKGKRIRPFLTLLASEAVSGNSENALKVALAVEVLHNFTLMHDDI--MDE 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGL 156 +R +PTVH +++ AI++G+ ++ YA+E+ ++ +L+ L H NI + Sbjct: 93 AELRHNRPTVHREWNANVAILSGDMMIAYAYELALEAESHR----HCELIHILNHANITI 148 Query: 157 QGMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GQ LD++ E + + MI K KTG L+ A E+G + A A++ + + L Sbjct: 149 ---CEGQALDMELEEKQDATIADYLDMISK-KTGRLISAALEAGGVSADATREQLQSLVL 204 Query: 213 FGENLGIIFQLADDLLD 229 FGE +G FQ+ DD LD Sbjct: 205 FGEKIGRAFQIQDDYLD 221 >gi|222099500|ref|YP_002534068.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359] gi|221571890|gb|ACM22702.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359] Length = 272 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 98/195 (50%), Gaps = 17/195 (8%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 SA++Y++ GGK+IR LV V + V A+E H SL+HDDLP +DN Sbjct: 24 SAMQYSVTAGGKRIRPLLVLTVGEDIGVEEERLVDVAVAVELFHTASLVHDDLPPIDNAD 83 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRGKP+ H Y E A++AG+GL AF I+ +R + + + Sbjct: 84 FRRGKPSCHRAYGEGIALLAGDGLFFLAFSQIA--------KVREPKLFEEFSETAYK-L 134 Query: 160 LGGQMLDIQDEFID-ETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGE 215 L G+ +D++ E + E V M++KM KTGAL F C S + + ++ GE Sbjct: 135 LLGEAMDVEFERQEKEISVEMVEKMYSFKTGALFAF-CFSAPFLLKGLDH--TFVKKLGE 191 Query: 216 NLGIIFQLADDLLDC 230 G+ FQ+ DDL D Sbjct: 192 KFGVAFQIYDDLKDV 206 >gi|212550849|ref|YP_002309166.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549087|dbj|BAG83755.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 321 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 103/185 (55%), Gaps = 11/185 (5%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + GK+IR LF N A+ V A E H ++L+HDD+ +DN ++RRG+ TV Sbjct: 36 MKGKRIRPIFTLMACRLFQENIKCAIDVALAWEIFHNFTLMHDDI--IDNAFLRRGQSTV 93 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++++ A++AG+ +L A++ I+ Q +D ++L L +I + + GQ D+ Sbjct: 94 HTKWNKTIALLAGDSMLILAYKYIAKSPLQYRD-----ILLHLFSSIAAK-VCEGQAYDM 147 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E + + + + ++KT L+ SGAI+ AS + + L+ FG NLGI FQ+ Sbjct: 148 LLENRLDVRKKEYLELVRLKTATLLSACLYSGAIVGGASGQDAKFLQDFGINLGIAFQIQ 207 Query: 225 DDLLD 229 DD+LD Sbjct: 208 DDMLD 212 >gi|149202083|ref|ZP_01879056.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. TM1035] gi|149144181|gb|EDM32212.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. TM1035] Length = 304 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 13/200 (6%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDD 91 Q RL A+ Y+ GG +IR ++ A + + + AA+E +HC SL+HDD Sbjct: 37 QTPARLADALDYSTSPGGARIRPTILMSVALACGDDRPELSDAAAAALEIMHCASLVHDD 96 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ-LMLSL 150 LP D+ +RRGKP+VH Y E A++AG+ L+ +FEI++ + D R+ L+L+L Sbjct: 97 LPCFDDADLRRGKPSVHRAYSEPLAVLAGDALIIMSFEILA--RVAECDAARANALILAL 154 Query: 151 THNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G+ G+ GQ + E + + + + KTGAL A + GAI A+ +E E Sbjct: 155 ARRSGMPNGICAGQ--GWESEPTVDLEAY--HRSKTGALFIAATQMGAI---AAGHEPEP 207 Query: 210 LRCFGENLGIIFQLADDLLD 229 G +G FQ+ADDL D Sbjct: 208 WYELGARIGAAFQVADDLRD 227 >gi|301794294|emb|CBW36718.1| putative geranyltranstransferase [Streptococcus pneumoniae INV104] Length = 291 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|192361220|ref|YP_001981260.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107] gi|190687385|gb|ACE85063.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107] Length = 320 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A L + A IE IH +L+HDD+ M +RRG+PT + Sbjct: 41 GGKRLRPLLVMLAAKSLGYTGKQHLDLAAIIEFIHTATLLHDDVVDMSQ--LRRGRPTAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Q+ +++ G+ L + AF+++ + + + +LS T N +G + Q+++ + Sbjct: 99 AQWGNAPSVLVGDFLYSRAFQMMVAIGS-----MDVMAILSDTTNTIAEGEVQ-QLVNAK 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E F + KT L ACE G ++A A+ ++E LR +G ++GI FQL DD L Sbjct: 153 DPNVTEENYFQVIDKKTAILFSAACEVGGVIAGANTRQREALRHYGSHVGIAFQLVDDAL 212 Query: 229 DCEED 233 D D Sbjct: 213 DYTGD 217 >gi|189461913|ref|ZP_03010698.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136] gi|189431307|gb|EDV00292.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136] Length = 327 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 108/203 (53%), Gaps = 19/203 (9%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK++R L+ +LF + AAIE H ++L+HDDL MD Sbjct: 29 LYDPIEYVLGLGGKRLRPVLMLLAYNLFKEDVQAIFSQAAAIETYHNFTLLHDDL--MDK 86 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHN 153 +RRGKPTVH ++DE TAI++G+ +L +F+ + T +I S+ L + Sbjct: 87 ADMRRGKPTVHKKWDENTAILSGDAMLILSFQFMMQGCPVEYTHQVMDIFSRTALEVC-- 144 Query: 154 IGLQGMLGGQMLDIQDEFIDETQV--FM-IQKMKTGALMCFACESGAIMAHASQNEKERL 210 GQ D++ E ++ V +M + ++KT L+ A + GA++ AS+ + + L Sbjct: 145 -------DGQQWDMEFESREDVTVDEYMEMIRLKTSVLLAGALKIGAVLGGASEKDAQLL 197 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 FG +G+ FQL DD LD D Sbjct: 198 YDFGIQIGLAFQLQDDYLDVYGD 220 >gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum DSM 4136] Length = 295 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 77/240 (32%), Positives = 123/240 (51%), Gaps = 11/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ L S L + +D LD + + T H A+R++L GGK++R L Sbjct: 1 MSADLKSYLTQRVAFVDAALDRFVAAAETRPVTIHK-----AMRHSLFAGGKRLRPILCL 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + AL A+EC+H YSLIHDDLP MD+ +RRG PT H + E A++A Sbjct: 56 AAAEACGGSLENALYAACAVECLHTYSLIHDDLPCMDDDDMRRGVPTCHKVFGEAMALLA 115 Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L +FE+++ +P T + ++L L G ++GGQ+ D++ E + Sbjct: 116 GDALQALSFELVAQTPVTHRHSP--AAMVLELARTAGSLHLVGGQVADLEGEGKKLGIED 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I + KT AL+ + + G + A A ++ + L FG G+ FQ+ DD+LD + K Sbjct: 174 LRYIHESKTAALLTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDVTQTTEK 233 >gi|15897028|ref|NP_341633.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus solfataricus P2] gi|284173372|ref|ZP_06387341.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus solfataricus 98/2] gi|14423727|sp|P95999|GGPS_SULSO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase gi|13813193|gb|AAK40423.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus solfataricus P2] gi|261601682|gb|ACX91285.1| Dimethylallyltranstransferase [Sulfolobus solfataricus 98/2] Length = 332 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 7/183 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ + L + A + AA+E +H ++L+HDD+ MDN +RRG PTVH Sbjct: 43 GGKRLRPLVLVSSSDLIGGDRERAYKAAAAVEILHNFTLVHDDI--MDNDGLRRGLPTVH 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +++ E AI+AG+ L AFE ++ L N + +I + + GQ +D+ Sbjct: 101 VKWGEPMAILAGDYLHAKAFEALNEALKGLDGNTFYKAFSIFITSIEI--ISEGQAMDMS 158 Query: 169 DE-FIDETQVFMIQKMKTGALMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E +D T+ IQ +K M F+C + G I+ A+ + ++L +G NLGI FQ+ D Sbjct: 159 FENRLDVTEEEYIQMIKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVD 218 Query: 226 DLL 228 D+L Sbjct: 219 DIL 221 >gi|5912297|emb|CAB56064.1| geranylgeranyl pyrophosphate synthase [Paracoccus marcusii] Length = 291 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 2/194 (1%) Query: 40 LSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 L A AL GK+ R L+ A T + A+E +H SLI DDLP MD+ Sbjct: 31 LGAAMAALSSGKRFRGMLMLLAAEASGGVCDTIVDAACAVEMVHAASLIFDDLPCMDDAG 90 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+P H+ + E A++ G L+T A +++ + +R+QL+ L+ ++G QG+ Sbjct: 91 LRRGQPATHVAHGESRAVLGGIALITEAMALLAGARGA-SGTVRAQLVRILSRSLGPQGL 149 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 GQ LD+ + V Q +KTG L E A++ E+ ++ FG LG Sbjct: 150 CAGQDLDLH-AAKNGAGVEQEQDLKTGVLFIAGLEMLAVIKEFDAEEQTQMIDFGRQLGR 208 Query: 220 IFQLADDLLDCEED 233 +FQ DDLL+ D Sbjct: 209 VFQSYDDLLEVVGD 222 >gi|89889496|ref|ZP_01201007.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7] gi|89517769|gb|EAS20425.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7] Length = 327 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 18/209 (8%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 S + Q L + Y L LGGK++R L A ++ A+ A+E H ++L Sbjct: 17 SRVTAQEPASLYDPVHYILQLGGKRLRPILTLMSAQMYGGKIDKAMDAAIAVEVFHNFTL 76 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRS 144 +HDD+ MD+ +RRGK TVH+++D T I++G+ +L A+++ +S P+T + + S Sbjct: 77 LHDDI--MDDADLRRGKETVHVKWDVNTGILSGDAMLIMAYQLFNSYDPETFYWLNQVFS 134 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAH 201 + L + GQ D+ E D+ ++ + K+KT L+ A + GAI+A Sbjct: 135 KTALEVCE---------GQQYDVDFETRDDVTISEYINMIKLKTSVLVGCALQMGAIIAG 185 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++ E++ + +G N+G+ FQL DD LD Sbjct: 186 VNKKEQQLIYDYGINIGLAFQLMDDYLDA 214 >gi|260431561|ref|ZP_05785532.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis ITI-1157] gi|260415389|gb|EEX08648.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis ITI-1157] Length = 332 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 9/206 (4%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + M ++H R+ + + GGK++R L A LF +R+ A +E IH +L Sbjct: 30 TRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLFGYGGDHHIRLAATVEFIHTATL 89 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D RRG+PT ++ +D ++++ G+ L + +F+++ + +I + Sbjct: 90 LHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRVLDILANAS 147 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 ++ LQ M D DE + + KT AL A E G ++A AS+ + Sbjct: 148 ATIAEGEVLQ------MTAATDLRTDEAVYLQVVRGKTAALFSAATEVGGVIAGASEEQV 201 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L +G+ LGI FQ+ADDLLD + D Sbjct: 202 RALFAYGDALGIAFQIADDLLDYQGD 227 >gi|333023935|ref|ZP_08451999.1| PlaT4 [Streptomyces sp. Tu6071] gi|81250709|gb|ABB69754.1| PlaT4 [Streptomyces sp. Tu6071] gi|332743787|gb|EGJ74228.1| PlaT4 [Streptomyces sp. Tu6071] Length = 359 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/226 (33%), Positives = 108/226 (47%), Gaps = 20/226 (8%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV-- 75 T DD L +H H S + A GK +R+ L F + RV Sbjct: 44 TRFDDRLRPMVAH----HFGWPSSDLPTATTSGKMVRATLTVLTGECFTTDAEAISRVTA 99 Query: 76 -GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 GAA+E IH +SLIHDD+ MD RRG+P V +Y AI+ G+ LL A ++ P Sbjct: 100 AGAAVEMIHNFSLIHDDV--MDGDRERRGRPAVWHEYGIPAAILTGDLLLAQAPLMLDGP 157 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCF 191 + R+ +L+ + + GQM D+ E E + + KTGAL+ Sbjct: 158 WAA---DPRATRLLAE----AVARLAAGQMADLSLEGRPEASPDEALAVAADKTGALLAC 210 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 ACE GA++A AS+ R FG LG+ FQ+ADD+L D P++ Sbjct: 211 ACELGALLAGASEEATRRFSRFGLRLGLAFQIADDILGIWGD-PRR 255 >gi|149002571|ref|ZP_01827503.1| GTP-binding protein LepA [Streptococcus pneumoniae SP14-BS69] gi|237649510|ref|ZP_04523762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CCRI 1974] gi|237822542|ref|ZP_04598387.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CCRI 1974M2] gi|147759182|gb|EDK66175.1| GTP-binding protein LepA [Streptococcus pneumoniae SP14-BS69] Length = 291 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPKMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|256752864|ref|ZP_05493702.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256748241|gb|EEU61307.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 168 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 81/134 (60%), Gaps = 7/134 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + A+RY++ GGK++R L L + AL V AIE IH YSLIHDDLP+MDN Sbjct: 30 IYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAMDN 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--- 154 +RRGKPT H Y E AI+AG+GLL +E++ + L+ + +L T+ I Sbjct: 90 DDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLV--RHALEHPEDYERILKATNEIATA 147 Query: 155 -GLQGMLGGQMLDI 167 G +G++GGQ++DI Sbjct: 148 SGCKGIIGGQVVDI 161 >gi|148985099|ref|ZP_01818338.1| GTP-binding protein LepA [Streptococcus pneumoniae SP3-BS71] gi|147922544|gb|EDK73662.1| GTP-binding protein LepA [Streptococcus pneumoniae SP3-BS71] gi|301800132|emb|CBW32736.1| putative geranyltranstransferase [Streptococcus pneumoniae OXC141] Length = 291 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVGLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|332877798|ref|ZP_08445537.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684263|gb|EGJ57121.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 327 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 15/201 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + IRY L +GGK+IR L+ +L+ AIE H Y+L+HDDL MD Sbjct: 27 LYAPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEVIGSQAMAIEIYHNYTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIG 155 +RRG TVH ++D+ AI++G+ +L A+ + P QL + + L IG Sbjct: 85 ADMRRGMATVHKKWDDNAAILSGDSMLVMAYRYMQQGCPVEQLGNVM--GLFTETALEIG 142 Query: 156 LQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GQ DI+ E + E + + ++KT L+ A + GA + A + + E L Sbjct: 143 -----EGQQYDIEFETRADVSEEEYIEMIRLKTSVLLACALKIGAWLGDAPRQDAELLYR 197 Query: 213 FGENLGIIFQLADDLLDCEED 233 FGENLG+ FQL DD LD D Sbjct: 198 FGENLGLAFQLQDDYLDVYGD 218 >gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii] gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii] Length = 261 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 7/197 (3%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+RYA+ GG++ L A+ A+E I + DDLPS+D+ +R Sbjct: 4 AMRYAVGGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDSELR 63 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 GKPTVH + TA+ AG LL FE +++ + + ++++ ++ IG G+L Sbjct: 64 HGKPTVHRAFGIPTALFAGTALLALGFEHLAA---RYSGDTAARMVAEVSRAIGSTGLLA 120 Query: 162 GQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ +D+ D ++ + + KT AL+ + +GAI AS+ E E LR +G Sbjct: 121 GQAVDLGIENPDRAVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYGRVT 180 Query: 218 GIIFQLADDLLDCEEDL 234 G+++Q+ DD+ D + + Sbjct: 181 GLLYQIVDDVADATKTM 197 >gi|270641252|ref|ZP_06222125.1| geranyltranstransferase [Haemophilus influenzae HK1212] gi|270317343|gb|EFA28880.1| geranyltranstransferase [Haemophilus influenzae HK1212] Length = 220 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 7/151 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 + G +L+E +++ T ++ L +++ HN LL A+ YALL GGK++R FLV Sbjct: 75 LTGEQVDRLKEELQQVQTRINRFLEAQFEGIES-HNAPLLEAMEYALLLGGKRVRPFLVY 133 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+A Sbjct: 134 ATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILA 193 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 G+ L ++AFEI++ NI S+ L+L Sbjct: 194 GDALQSFAFEILTKTP-----NISSEQKLAL 219 >gi|15903130|ref|NP_358680.1| geranyltranstransferase [Streptococcus pneumoniae R6] gi|116516004|ref|YP_816536.1| geranyltranstransferase [Streptococcus pneumoniae D39] gi|169833983|ref|YP_001694642.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae Hungary19A-6] gi|225856878|ref|YP_002738389.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae P1031] gi|15458710|gb|AAK99890.1| Farnesyl diphosphate synthase [Streptococcus pneumoniae R6] gi|116076580|gb|ABJ54300.1| geranyltranstransferase [Streptococcus pneumoniae D39] gi|168996485|gb|ACA37097.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae Hungary19A-6] gi|225724667|gb|ACO20519.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae P1031] Length = 291 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|296876934|ref|ZP_06900979.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 15912] gi|296432065|gb|EFH17867.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 15912] Length = 291 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 4/164 (2%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +V A+E IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L F +I Sbjct: 63 FQVAGALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEALAILAGDALFLDPFGMIV 122 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190 + + L D ++ L+L L+ G +GM+ GQ+LD++ E T ++ I KTG L+ Sbjct: 123 A--SALPDAVKVSLILELSDASGSRGMVAGQVLDMEGEHKQLTLAELQTIHANKTGRLLA 180 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + + ++ + + L G+ LG+ FQ+ DD+LD D Sbjct: 181 YPFIAAGLILELQADIGQLLEKIGKKLGLAFQVRDDILDLVADF 224 >gi|332074819|gb|EGI85291.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA41301] Length = 291 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|148269899|ref|YP_001244359.1| polyprenyl synthetase [Thermotoga petrophila RKU-1] gi|281412220|ref|YP_003346299.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10] gi|61657360|emb|CAI44277.1| geranyltranstransferase [Thermotoga naphthophila RKU-10] gi|147735443|gb|ABQ46783.1| farnesyl-diphosphate synthase [Thermotoga petrophila RKU-1] gi|281373323|gb|ADA66885.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10] Length = 272 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/189 (33%), Positives = 91/189 (48%), Gaps = 16/189 (8%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 A +GGK+IR LV V L V A+E H SLIHDDLP +DN RRGKP Sbjct: 30 ATVGGKRIRPLLVLTLGEDLGVEEEKLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKP 89 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + H Y E A++AG+GL AF IS S++ + +L G+ + Sbjct: 90 SCHRTYGEDIALLAGDGLFFLAFSQISKIGN-------SKIFEEFSETA--YKLLLGEAM 140 Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D++ E I + V + KTGAL F + I+ + + +++ GE G+ F Sbjct: 141 DVEFERRKMEISQEMVERMYAFKTGALFAFCFSAPFIL---KEKDHTKMKLLGEKFGVAF 197 Query: 222 QLADDLLDC 230 Q+ DDL D Sbjct: 198 QIYDDLKDI 206 >gi|149012256|ref|ZP_01833325.1| GTP-binding protein LepA [Streptococcus pneumoniae SP19-BS75] gi|149019197|ref|ZP_01834559.1| GTP-binding protein LepA [Streptococcus pneumoniae SP23-BS72] gi|168486528|ref|ZP_02711036.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC1087-00] gi|168491126|ref|ZP_02715269.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC0288-04] gi|147763582|gb|EDK70517.1| GTP-binding protein LepA [Streptococcus pneumoniae SP19-BS75] gi|147931067|gb|EDK82046.1| GTP-binding protein LepA [Streptococcus pneumoniae SP23-BS72] gi|183570476|gb|EDT91004.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC1087-00] gi|183574440|gb|EDT94968.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae CDC0288-04] Length = 291 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|121998392|ref|YP_001003179.1| polyprenyl synthetase [Halorhodospira halophila SL1] gi|121589797|gb|ABM62377.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1] Length = 291 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 12/223 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69 E SKRI++ L+ + + + A+R+A+ GG ++R L A+ +H Sbjct: 2 EPSKRIESALEAAVARATAAPAPPQL---AHAVRHAVFAGGARVRPRLCLTVAAACGDDH 58 Query: 70 LT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A AIE +HC SL+HDDLP D+ RRG+P+VH Y E A++AG+ L+ +A Sbjct: 59 PELADAAATAIELMHCASLVHDDLPCFDDAATRRGQPSVHAAYGERLAVLAGDALIVHAL 118 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E ++ Q L+ ++T G+ G+ GQ + + E V + KTG+ Sbjct: 119 ETLALTVPQAPQRA-GALLTTVTRATGMPYGITAGQAWESEPEI----PVAEYHQAKTGS 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 L A + +A ++++ +R R GE LG +Q+ADDL D Sbjct: 174 LFAAATVA-GAIAAGAEDQADRWRIVGERLGEAYQVADDLRDA 215 >gi|160889241|ref|ZP_02070244.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492] gi|156861248|gb|EDO54679.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492] Length = 346 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 75/231 (32%), Positives = 120/231 (51%), Gaps = 18/231 (7%) Query: 12 NSKRIDTILDDLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 NS+ +LL + SH+ T+ L + + Y L +GGK+IR L+ +L+ Sbjct: 18 NSENAMFTASELLERINSHIAELQFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQ 77 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + IE H Y+L+HDDL MD RRGK TVH +D+ AI++G+ +L Sbjct: 78 EDITRIFNPATGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVL 135 Query: 127 AFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQK 182 A++ ++ P LK+ + + SLT L+ + GQ LD++ E + + + + Sbjct: 136 AYQFMAQCPVEHLKEVMD---IFSLT---ALE-ICEGQQLDMEFEHRKDVKAEEYLEMIR 188 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +KT L+ + + GA++ AS + E+L FG NLG+ FQL DD LD D Sbjct: 189 LKTSVLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDVYGD 239 >gi|15642935|ref|NP_227976.1| geranyltranstransferase [Thermotoga maritima MSB8] gi|4980655|gb|AAD35254.1|AE001701_7 geranyltranstransferase [Thermotoga maritima MSB8] Length = 272 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/188 (35%), Positives = 92/188 (48%), Gaps = 16/188 (8%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 A +GGK+IR LV V L V A+E H SLIHDDLP +DN RRGKP Sbjct: 30 ATVGGKRIRPLLVLTLGEDLGVEEEKLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKP 89 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + H Y E A++AG+GL AF IS S++ + +L G+ + Sbjct: 90 SCHRTYGEDIALLAGDGLFFLAFSQISKIGN-------SKIFEEFSETA--YKLLLGEAM 140 Query: 166 DIQDEFID-ETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D++ E E M+++M KTGAL F C S + + K ++ GE G+ F Sbjct: 141 DVEFERRKMEVSQEMVERMYAFKTGALFAF-CFSAPFILKGKDHTK--MKLLGEKFGVAF 197 Query: 222 QLADDLLD 229 Q+ DDL D Sbjct: 198 QIYDDLKD 205 >gi|317479594|ref|ZP_07938721.1| polyprenyl synthetase [Bacteroides sp. 4_1_36] gi|316904256|gb|EFV26083.1| polyprenyl synthetase [Bacteroides sp. 4_1_36] Length = 346 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 75/231 (32%), Positives = 120/231 (51%), Gaps = 18/231 (7%) Query: 12 NSKRIDTILDDLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 NS+ +LL + SH+ T+ L + + Y L +GGK+IR L+ +L+ Sbjct: 18 NSENAMFTASELLERINSHIAELQFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQ 77 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + IE H Y+L+HDDL MD RRGK TVH +D+ AI++G+ +L Sbjct: 78 EDITRIFNPATGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVL 135 Query: 127 AFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQK 182 A++ ++ P LK+ + + SLT L+ + GQ LD++ E + + + + Sbjct: 136 AYQFMAQCPVEHLKEVMD---IFSLT---ALE-ICEGQQLDMEFEHRKDVKAEEYLEMIR 188 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +KT L+ + + GA++ AS + E+L FG NLG+ FQL DD LD D Sbjct: 189 LKTSVLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDVYGD 239 >gi|256811061|ref|YP_003128430.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86] gi|256794261|gb|ACV24930.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86] Length = 317 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 119/203 (58%), Gaps = 22/203 (10%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 +D+L +A ++ L GGK+IR +L L + L AA+E IH Y+LIHDD+ Sbjct: 22 DDKLYNASKHLLFAGGKRIRPYLAVVTYMLKKDDIEEVLPAAAAVELIHNYTLIHDDIMD 81 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 D+ RRGKPTVH+ + E AI+AG+ L AFE +S ++KDN ++ +L + Sbjct: 82 HDDE--RRGKPTVHVVFGEPMAILAGDLLYAKAFEAVS----KIKDNKKAHEVLKILSKA 135 Query: 155 GLQGMLGGQMLDIQ--------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 ++ + GQ +D++ DE+++ MI+K KTGAL+ + E GA+MA ++ E Sbjct: 136 CVE-VCEGQAMDMEFENYYPTMDEYLE-----MIRK-KTGALLEASVEIGAVMADCNEEE 188 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 + L+ + + +G+ FQ+ DD+LD Sbjct: 189 RNALKEYAKRIGLTFQIQDDVLD 211 >gi|1707833|emb|CAA69541.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus solfataricus P2] Length = 332 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 7/183 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ + L + A + AA+E +H ++L+HDD+ MDN +RRG PTVH Sbjct: 43 GGKRLRPLVLVSSSDLIGGDRERAYKAAAAVEILHNFTLVHDDI--MDNDGLRRGLPTVH 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +++ E AI+AG+ L AFE ++ L N + +I + + GQ +D+ Sbjct: 101 VKWGEPMAILAGDYLHAKAFESLNESLKGLDGNTFYKAFSIFITSIEI--ISEGQAMDMS 158 Query: 169 DE-FIDETQVFMIQKMKTGALMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E +D T+ IQ +K M F+C + G I+ A+ + ++L +G NLGI FQ+ D Sbjct: 159 FENRLDVTEEEYIQMIKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVD 218 Query: 226 DLL 228 D+L Sbjct: 219 DIL 221 >gi|288904840|ref|YP_003430062.1| farnesyl diphosphate synthase [Streptococcus gallolyticus UCN34] gi|288731566|emb|CBI13121.1| putative farnesyl diphosphate synthase [Streptococcus gallolyticus UCN34] Length = 289 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 116/197 (58%), Gaps = 8/197 (4%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSM 95 L+ AI Y++ GGK IR + E F + LT V AA+E IH SLIHDDLP+M Sbjct: 25 LIEAILYSVEAGGKLIRPLIFLEILEGFGI-ELTEGHFDVAAALEMIHTGSLIHDDLPAM 83 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ RRG+ T H ++DE TAI+AG+ L F ++++ L + + L+ L+ G Sbjct: 84 DDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFGLVAN--AALSADTKVCLIAELSQASG 141 Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+GGQMLD++ E ++ +++ +I KTG L+ F + I+A+ + ++ + LR Sbjct: 142 TYGMVGGQMLDMKGEERKLNLSELQLIHANKTGKLLTFPVVAAGIVANLAPDDLKSLREA 201 Query: 214 GENLGIIFQLADDLLDC 230 G +G+ FQ+ DD+LD Sbjct: 202 GSLVGLAFQVRDDILDV 218 >gi|222480459|ref|YP_002566696.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239] gi|222453361|gb|ACM57626.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 348 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 28/221 (12%) Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA----------------SLFNVNHLTA 72 + QH +RL A RY L GGK++R + T A + + N + Sbjct: 28 ELPVQHPERLYEATRYILEAGGKRLRPTVTTLAAEAVTGTDPLSADFREFAALDGNTVDV 87 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +R AIE I ++LIHDD+ MD +RRG P VH QYD TAI+AG+ L + AFE ++ Sbjct: 88 MRAAVAIEVIQSFTLIHDDI--MDEDDLRRGVPAVHEQYDISTAILAGDTLYSKAFEFMT 145 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGAL 188 + + + + ML+ T + GQ LD+ +D+ + E + M++ +KT L Sbjct: 146 ETGSDPANGLEAMRMLATT----CTEICEGQSLDVSFESRDDILPEEYLEMVE-LKTAVL 200 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + A++ A + L +G + G FQ+ DD+LD Sbjct: 201 YGASAATPAVLLGADDEVVDALYQYGIDSGRAFQIQDDVLD 241 >gi|324993385|gb|EGC25305.1| geranyltranstransferase [Streptococcus sanguinis SK405] Length = 291 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 114/201 (56%), Gaps = 6/201 (2%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDD 91 Q + L I Y++ GGK+IR L+ E F + A +V AA+E IH SLIHDD Sbjct: 22 QVSSDLTEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDD 81 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ RRG+ T H ++ E AI+AG+ L + +++ + +L I+ L+ L+ Sbjct: 82 LPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQIKVDLISELS 139 Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G GM+ GQ+LD+Q E I + I KTG L+ + + ++A A Q+ +++ Sbjct: 140 LAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTGKLLTYPFVAAGLIAEAQQSVQDK 199 Query: 210 LRCFGENLGIIFQLADDLLDC 230 LR GE LG+ FQ+ DD+LD Sbjct: 200 LRRIGELLGLAFQVRDDILDV 220 >gi|68304991|gb|AAY90002.1| predicted dimethylallyltransferase FN1327 [uncultured bacterium BAC13K9BAC] Length = 274 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 111/199 (55%), Gaps = 10/199 (5%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N +L + Y++ GGK++R ++ E A ++N L+ AIE +H YSLIHDDLP Sbjct: 28 NTKLYKVMCYSMKNGGKRLRPIIIKEVAKSLSLNKNQFLKSMIAIELVHSYSLIHDDLPC 87 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ RRG+ + H +YDE AI+AGN LLT AF +++ L+ L+ Sbjct: 88 MDDDDYRRGRLSTHKKYDEAQAILAGNSLLTMAFNLLAQDSN-------PSLVELLSLLS 140 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G +G+ GGQ LD+ ++ ++ + I + KT L F + I+++ SQ E R Sbjct: 141 GHEGLAGGQSLDVDTTEKKLNFKIIKKIHEQKTAKLFEFCLAAPFIISNKSQKEINMSRK 200 Query: 213 FGENLGIIFQLADDLLDCE 231 +G+ +G +FQ+ DD+ D E Sbjct: 201 YGKIIGTVFQIIDDVHDYE 219 >gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 343 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 104/197 (52%), Gaps = 9/197 (4%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY LL GGK++R L L TA+ A+E IH SLI DDLP MD+ + Sbjct: 77 AMRYTLLSGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSL 136 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRG PT H + E T+I+A N L++ A + ++S + + + + +G +G+ Sbjct: 137 RRGIPTNHKVFGEKTSILASNALMSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGL 196 Query: 160 LGGQMLDIQDEFI------DETQVF-MIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 + GQ D+ E + DE + ++ KT L+ A GAIM S E ERL+ Sbjct: 197 VAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKS 256 Query: 213 FGENLGIIFQLADDLLD 229 + +G++FQ+ DD+LD Sbjct: 257 YARCVGLMFQVMDDVLD 273 >gi|134046661|ref|YP_001098146.1| dimethylallyltranstransferase [Methanococcus maripaludis C5] gi|132664286|gb|ABO35932.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Methanococcus maripaludis C5] Length = 317 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 24/206 (11%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDD 91 + + +L A ++ LL GGK++R +L L + +T + A ++E IH Y+L+HDD Sbjct: 20 EKDTKLYGASKHLLLAGGKRVRPYLSI-ITYLLKKDDITEILAPALSVELIHNYTLVHDD 78 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + MDN RRG PTVH Y E AI+AG+ L AFE +S+ ++D+ ++ +L + Sbjct: 79 I--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAFEALSN----IEDSKKAHEVLKVL 132 Query: 152 HNIGLQGMLGGQMLDIQ--------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 ++ + GQ D++ DE+ D MI K KTGAL+ E GA+MA+ + Sbjct: 133 SKACVE-VCEGQTDDMEFEERFPTLDEYFD-----MISK-KTGALIVAPVEIGAVMANCT 185 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229 E++ L + + +G+ FQ+ DD+LD Sbjct: 186 PEERKALCNYAKRIGMTFQIQDDVLD 211 >gi|170288584|ref|YP_001738822.1| polyprenyl synthetase [Thermotoga sp. RQ2] gi|61657510|emb|CAI44421.1| geranyltranstransferase [Thermotoga sp. RQ2] gi|170176087|gb|ACB09139.1| Polyprenyl synthetase [Thermotoga sp. RQ2] Length = 272 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/188 (35%), Positives = 90/188 (47%), Gaps = 16/188 (8%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 A +GGK+IR LV V L V A+E H SLIHDDLP +DN RRGKP Sbjct: 30 ATVGGKRIRPLLVLTLGEDLGVEEEKLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKP 89 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + H Y E A++AG+GL AF IS S++ + +L G+ + Sbjct: 90 SCHRTYGEDIALLAGDGLFFLAFSQISKIGN-------SKIFEEFSETA--YKLLLGEAM 140 Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D++ E I + V + KTGAL F C S + + K ++ GE G+ F Sbjct: 141 DVEFERRKMEISQEMVERMYAFKTGALFAF-CFSAPFILKGKDHTK--MKLLGEKFGVAF 197 Query: 222 QLADDLLD 229 Q+ DDL D Sbjct: 198 QIYDDLKD 205 >gi|86130739|ref|ZP_01049338.1| polyprenyl synthetase [Dokdonia donghaensis MED134] gi|85818150|gb|EAQ39310.1| polyprenyl synthetase [Dokdonia donghaensis MED134] Length = 324 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 12/205 (5%) Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 H + L I Y L LGGK++R L LF ++ AL A+E H +SL+ Sbjct: 18 HALEKEPKNLYEPINYILQLGGKRLRPVLTLMACELFEKDYKDALDAALAVEIFHNFSLV 77 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ MD+ +RRG+ TVH ++D T I++G+ +L A+++ + + + + Sbjct: 78 HDDI--MDDAPLRRGEETVHEKWDINTGILSGDAMLIRAYQLFEN-----YEGATFKELA 130 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQN 205 L ++ + GQ D+ E D+ + KM KT L+ A + GAI+A AS++ Sbjct: 131 KLFSKTAIE-VCEGQQYDVDFETRDDVTIPEYMKMIEYKTAVLVGAALKMGAIVAGASKS 189 Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230 +E + +G +LG+ FQL DD LD Sbjct: 190 CQEGIYNYGRDLGLAFQLQDDYLDA 214 >gi|14625002|dbj|BAB61881.1| farnesyl diphosphate synthase [Agrobacterium ferrugineum] Length = 141 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 85/147 (57%), Gaps = 10/147 (6%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+P+MDN +RRG PTVH ++DE A++AG+ L T +FE+++ L N R L+ Sbjct: 1 HDDMPAMDNDDLRRGLPTVHRKWDEGVAVLAGDALQTLSFELLT--DATLGPN-RLALIS 57 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 S+ G +GM+ GQ DI E + Q+ +Q KTGAL ++ +G ++A A Sbjct: 58 SMARAAGARGMVLGQARDIAAETAATPLTLPQITRLQAGKTGALFEWSATAGPVLAGADT 117 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231 R F +G+ FQ+ADD+LD E Sbjct: 118 GPLGR---FAAAIGLAFQIADDILDVE 141 >gi|150402965|ref|YP_001330259.1| polyprenyl synthetase [Methanococcus maripaludis C7] gi|150033995|gb|ABR66108.1| Polyprenyl synthetase [Methanococcus maripaludis C7] Length = 317 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 120/222 (54%), Gaps = 28/222 (12%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL--VTECASLFNVNHLTALRV 75 IL + + +M+ N L SA ++ LL GGK++R +L +T ++N + A Sbjct: 7 ILSKIDSELKKYMEKDTN--LYSASKHLLLAGGKRVRPYLSIITYLLKKDDINEIMA--P 62 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 ++E IH Y+L+HDD+ MDN RRG PTVH Y E AI+AG+ L AFE +S+ Sbjct: 63 ALSVELIHNYTLVHDDI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAFEALSN-- 118 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--------DEFIDETQVFMIQKMKTGA 187 + D+ ++ +L + ++ + GQ D++ DE+ D MI K KTGA Sbjct: 119 --IGDSKKAHEVLKVLSKACVE-VCEGQTDDMEFEERFPTLDEYFD-----MISK-KTGA 169 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ E GAIMA + E+ L + + +G+ FQ+ DD+LD Sbjct: 170 LIVAPVEIGAIMAECTPEERNALCNYAKRIGMTFQIQDDVLD 211 >gi|110597592|ref|ZP_01385877.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031] gi|110340712|gb|EAT59189.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031] Length = 366 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 110/200 (55%), Gaps = 14/200 (7%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L RY L G GK+IR FL + + + AL V A+E +H ++L+HDD+ MD Sbjct: 71 LYEPARYILEGKGKRIRPFLTLLASEAVSGSSENALNVALAVEVLHNFTLMHDDI--MDQ 128 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +R G+PTVH++++ AI++G+ ++ YA+E+ K+ R ++ + ++ + Sbjct: 129 ADLRHGRPTVHLEWNVNAAILSGDMMIAYAYELALQAKSS-----RHAELVHILNDANIT 183 Query: 158 GMLGGQMLDIQ-DEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ LD++ +E D T + MI K KTG L+ A E+G + +A+ + L F Sbjct: 184 -ICEGQALDMELEEKKDATIADYLDMIAK-KTGRLISAALEAGGVAGNATDEQLRSLVLF 241 Query: 214 GENLGIIFQLADDLLDCEED 233 GE +G FQ+ DD LD D Sbjct: 242 GEKIGRAFQIQDDYLDIMAD 261 >gi|332203057|gb|EGJ17125.1| ispA protein [Streptococcus pneumoniae GA47901] Length = 291 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220 >gi|159905289|ref|YP_001548951.1| polyprenyl synthetase [Methanococcus maripaludis C6] gi|159886782|gb|ABX01719.1| Polyprenyl synthetase [Methanococcus maripaludis C6] Length = 317 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 113/201 (56%), Gaps = 12/201 (5%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHD 90 + + +L A ++ LL GGK++R +L L + +T + A ++E IH Y+L+HD Sbjct: 19 VEKDTKLYGASKHLLLAGGKRVRPYLSI-ITYLLKKDDITEILAPALSVELIHNYTLVHD 77 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ MDN RRG PTVH Y E AI+AG+ L AFE +S+ ++D+ ++ +L + Sbjct: 78 DI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAFEALSN----IEDSNKAHEVLKV 131 Query: 151 THNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 ++ + GQ ++ ++ F + F + KTGAL+ E GA+MA + E+E Sbjct: 132 LSKACVE-VCEGQTDDMEFEERFPTLYEYFDMISKKTGALIVAPVEIGAVMADCTPEERE 190 Query: 209 RLRCFGENLGIIFQLADDLLD 229 L + + +G+ FQ+ DD+LD Sbjct: 191 ALCNYAKRIGMTFQIQDDVLD 211 >gi|332362900|gb|EGJ40693.1| geranyltranstransferase [Streptococcus sanguinis SK49] Length = 291 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 114/201 (56%), Gaps = 6/201 (2%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDD 91 Q + L I Y++ GGK+IR L+ E F + A +V AA+E IH SLIHDD Sbjct: 22 QVSSDLTEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDD 81 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ RRG+ T H ++ E AI+AG+ L + +++ + +L I+ L+ L+ Sbjct: 82 LPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQIKVDLISELS 139 Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G GM+ GQ+LD+Q E I + I KTG L+ + + ++A A Q+ +++ Sbjct: 140 LAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTGKLLTYPFVAAGLIAEAQQSVQDK 199 Query: 210 LRCFGENLGIIFQLADDLLDC 230 LR GE LG+ FQ+ DD+LD Sbjct: 200 LRRIGELLGLAFQVRDDILDV 220 >gi|218460669|ref|ZP_03500760.1| farnesyltranstransferase protein [Rhizobium etli Kim 5] Length = 297 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 10/183 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG ++R L + + + H A R AAIE +HC SL+HDDLP DN +RRG+PTV Sbjct: 48 GGSRMRPKLCLKVSYVCGEKHPELATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTV 107 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLD 166 H + E A++AG+ L+ AF+ +S + L + +++ + +G G++ GQ + Sbjct: 108 HRLFGEPIAVLAGDALIVMAFKYLSL-QAALTPELGGRMIEVVAEAVGPSHGLIAGQSM- 165 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E + + KTG+L A GA+++ A ++ GE LG +Q+ADD Sbjct: 166 ---EAMTHVAIDRYHHYKTGSLFVAAATCGALVSGADPAPWSKV---GELLGHAYQIADD 219 Query: 227 LLD 229 + D Sbjct: 220 IAD 222 >gi|330998275|ref|ZP_08322100.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841] gi|329568664|gb|EGG50465.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841] Length = 327 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 105/202 (51%), Gaps = 17/202 (8%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L IRY L +GGK+IR L+ +L+ AIE H Y+L+HDDL MD Sbjct: 27 LYEPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEEIGFQAVAIEIYHNYTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIG 155 +RRG TVH ++D+ AI++G+ +L A+ + P L D ++SL Sbjct: 85 ADMRRGMATVHKKWDDNAAILSGDSMLVMAYRYMQQGCPAEHLGD------VMSLFTETA 138 Query: 156 LQGMLG-GQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 L+ +G GQ D++ E + E + + ++KT L+ A + GA + A + + E L Sbjct: 139 LE--IGEGQQYDMEFEARADVSEEEYIEMIRLKTSVLLACALKIGAWLGGAPRQDAELLY 196 Query: 212 CFGENLGIIFQLADDLLDCEED 233 FGENLG+ FQL DD LD D Sbjct: 197 RFGENLGLAFQLQDDYLDVYGD 218 >gi|145641598|ref|ZP_01797175.1| geranyltranstransferase [Haemophilus influenzae R3021] gi|145273645|gb|EDK13514.1| geranyltranstransferase [Haemophilus influenzae 22.4-21] Length = 163 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 6/131 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIIS 132 L ++AFEI++ Sbjct: 117 ALQSFAFEILT 127 >gi|189499392|ref|YP_001958862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1] gi|189494833|gb|ACE03381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1] Length = 332 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 14/196 (7%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L RY L G GK+IR FL A + A++ A+E +H ++L+HDD+ MD Sbjct: 37 LYGPARYILDGTGKRIRPFLTLLAAEAVCGSSENAIKTALAVEILHNFTLVHDDI--MDQ 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +R G+PTVH+++D AI++G+ ++ +A+E KT D + L N Sbjct: 95 ADLRHGRPTVHVKWDSTAAILSGDMMIAFAYECALQTKTARHDELVHIL------NDANI 148 Query: 158 GMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ +D++ E + + MI K KTG L+ + E+G I+ A + E+L F Sbjct: 149 TICEGQAIDMELEQRQDATIADYLDMIAK-KTGRLISASLEAGGIVGDADSEQIEKLMLF 207 Query: 214 GENLGIIFQLADDLLD 229 G+ +G FQ+ DD LD Sbjct: 208 GDKIGRAFQVQDDYLD 223 >gi|297619910|ref|YP_003708015.1| Dimethylallyltranstransferase [Methanococcus voltae A3] gi|297378887|gb|ADI37042.1| Dimethylallyltranstransferase [Methanococcus voltae A3] Length = 316 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 110/200 (55%), Gaps = 12/200 (6%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + + L +A ++ LL GGK+IR +L +L + ++E IH Y+L+HDD+ Sbjct: 19 EKDSNLYNASKHLLLAGGKRIRPYLSIMAYNLKKDGLDEIMAPALSVELIHNYTLVHDDI 78 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 MDN RRGKPTVH Y E AI+AG+ L AFE +S+ + D+I++ +L + Sbjct: 79 --MDNDDERRGKPTVHKVYGEPIAILAGDLLYAKAFEALST----IDDSIKAHKVLKILS 132 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 ++ + GQ D++ E T V MI K KTGAL+ GAIMA + E E Sbjct: 133 KACVE-VCEGQTDDMEFETTFPTMEQYVNMISK-KTGALIEAPILIGAIMADCTMEETEA 190 Query: 210 LRCFGENLGIIFQLADDLLD 229 L + + +GI FQ+ DD+LD Sbjct: 191 LYQYSKRIGINFQIQDDILD 210 >gi|332882802|ref|ZP_08450413.1| heptaprenyl diphosphate synthase component 2 family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679304|gb|EGJ52290.1| heptaprenyl diphosphate synthase component 2 family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 322 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 111/218 (50%), Gaps = 20/218 (9%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 ++ L + + + L I Y L LGGK++R L A LF ++ AL AA+ Sbjct: 9 EEFLAHLKTSIAVKEPRNLYEPIDYILQLGGKRLRPVLTLIAADLFGGDYRKALPAAAAV 68 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQ 137 E H +SL+HDD+ MDN +RRGK TVH +++ AI++G+ +L A+ ++ S P T Sbjct: 69 EVFHNFSLVHDDI--MDNASLRRGKATVHQKWNSNIAILSGDAMLISAYCLLDSYPPDT- 125 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFA 192 + L L+ + GQ D+ +F + QV + Q + KT L+ A Sbjct: 126 ------FAALAKLFSKTALE-VCEGQQWDM--DFETQAQVSIPQYLQMIRYKTAVLVGAA 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + GAI+A AS + + FG +G+ FQL DD LD Sbjct: 177 LQMGAIIAGASIENQRLIYDFGVTIGLAFQLQDDYLDT 214 >gi|62959203|gb|AAY23709.1| farnesyl diphosphate synthase [Roseobacter sp. JL-126] Length = 147 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 14/152 (9%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLM 147 HDD+P MDN +RRG+PT HI +DE TAI+AG+ L T AFE++S SP LK + ++ Sbjct: 1 HDDMPGMDNDDLRRGQPTCHIAFDEATAILAGDALQTLAFELLSESPLGGLKAERQLSMV 60 Query: 148 LSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 +L G GM GQ +D+Q + +++ ++ + + KTGAL+ A G + Sbjct: 61 NALARASGSAGMCAGQAIDLQATGQHVNDHELEHMHRHKTGALIEAAATIGVLC-----G 115 Query: 206 EKERLRC------FGENLGIIFQLADDLLDCE 231 E+E L+ F +LG+ FQ+ DD+LD E Sbjct: 116 EEEALKWQPHFKEFATHLGLAFQVHDDILDVE 147 >gi|20094211|ref|NP_614058.1| geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19] gi|19887236|gb|AAM01988.1| Geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19] Length = 324 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/190 (35%), Positives = 100/190 (52%), Gaps = 26/190 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L + + + L A+E IH ++LIHDD+ MD RRG P VH Sbjct: 43 GGKRIRPLLAIKSCLMLGGSEEDVLPEAVAVELIHTFTLIHDDI--MDEDDERRGVPAVH 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 +++ AI+AG+ L + AFE+ + +L + T + GQ +DI Sbjct: 101 VKWGVPVAILAGDTLFSKAFEVAAEGGDV---EAVKELARACTE------ICEGQAMDIG 151 Query: 168 --------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 +DEF++ MI+K KT AL+ +C G + A A++ + E LR +GENLGI Sbjct: 152 FENRTEVTEDEFLE-----MIRK-KTAALIRTSCVVGGLKAGANREQLEALREYGENLGI 205 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 206 AFQIQDDVLD 215 >gi|306829639|ref|ZP_07462829.1| geranyltranstransferase [Streptococcus mitis ATCC 6249] gi|304428725|gb|EFM31815.1| geranyltranstransferase [Streptococcus mitis ATCC 6249] Length = 291 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLF 65 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E SL Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQ 55 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VVIQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+ + + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIITELAPEIQAKLKTVGELIGLAFQVRDDVLDV 220 >gi|239617815|ref|YP_002941137.1| Polyprenyl synthetase [Kosmotoga olearia TBF 19.5.1] gi|239506646|gb|ACR80133.1| Polyprenyl synthetase [Kosmotoga olearia TBF 19.5.1] Length = 285 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 13/203 (6%) Query: 35 HNDRLL------SAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 H +RL+ S I Y L GGK++R +L+ + + +++G A+E H SL Sbjct: 22 HLERLMVCSSFSSIINYTPLTGGKRLRPYLIALFSQAIGLPSELYMKLGVAVELFHSGSL 81 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDDLP++DN RRGKP++H +DE +AI+AG+ L+ Y +++ +L N + + Sbjct: 82 IHDDLPAIDNDDFRRGKPSLHKAFDEASAILAGDFLMLYPVKVLQ----ELTINEHLKFL 137 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMKTGALMCFACESGAIMAHASQNE 206 L ++ G+ LD+ E T+ V I ++KT L F C S + E Sbjct: 138 LINEWIRTALSIIEGEYLDVTYEPSSNTKDVNRIHRLKTAELFGF-CFSSPFICADRMEE 196 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 ++++ G G IFQ+ DD+ D Sbjct: 197 AKKMKETGLRFGHIFQVLDDIKD 219 >gi|126179759|ref|YP_001047724.1| geranyltranstransferase [Methanoculleus marisnigri JR1] gi|125862553|gb|ABN57742.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Methanoculleus marisnigri JR1] Length = 321 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 76/229 (33%), Positives = 110/229 (48%), Gaps = 17/229 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L L+ N++RID +L + H D ++ L GGK++R +V A Sbjct: 4 LEDYLEMNAERIDKVLH-------RYFGDVHGDLFRASAHLLLAGGKRLRPAVVILAADA 56 Query: 65 FNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L A ++E H ++LIHDD+ MD RRG PTVH +DE TAI+AG+ L Sbjct: 57 VRKGSSDDLIPAALSLELTHNFTLIHDDI--MDGDAARRGVPTVHTIWDEPTAILAGDVL 114 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 AFE I + IR+ ML+ T + GQ +D+ E + E + + Sbjct: 115 YAKAFEFICFSEAADAAKIRAVKMLART----CTDICEGQSMDMAFEKRHDVSEVEYLEM 170 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTG L + G I+A AS + + L +G N GI FQ+ DDL+D Sbjct: 171 VSKKTGVLYGASAAIGGILAGASPVQADALYQYGVNSGIAFQIQDDLID 219 >gi|270295967|ref|ZP_06202167.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273371|gb|EFA19233.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 324 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 116/217 (53%), Gaps = 18/217 (8%) Query: 22 DLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LL + SH+ T+ L + + Y L +GGK+IR L+ +L+ + Sbjct: 6 ELLERINSHIAELQFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDITRIFNPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PK 135 IE H Y+L+HDDL MD RRGK TVH +D+ AI++G+ +L A++ ++ P Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQFMAQCPV 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 LK+ + + SLT L+ + GQ LD++ E + + + ++KT L+ + Sbjct: 124 EHLKEVMD---IFSLT---ALE-ICEGQQLDMEFEHRKDVKAEEYLEMIRLKTSVLLAAS 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + GA++ AS + E+L FG NLG+ FQL DD LD Sbjct: 177 LKIGALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLD 213 >gi|146338683|ref|YP_001203731.1| geranylgeranyl pyrophosphate synthetase [Bradyrhizobium sp. ORS278] gi|41018904|gb|AAR98495.1| geranyl geranyl synthase [Bradyrhizobium sp. ORS278] gi|146191489|emb|CAL75494.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (Farnesyltranstransferase) [Bradyrhizobium sp. ORS278] Length = 289 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 109/199 (54%), Gaps = 11/199 (5%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSM 95 RL +A++ A+ G ++R L A+ + A G+AIE +HC SL+HDDLP Sbjct: 26 RLSAAMQAAVFPKGARVRPRLCHAVAAACGDDEPAATDAAGSAIELLHCASLVHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRG+P+VH + E A++AG+ L+ AF+ ++ K++ ++L+ ++ +G Sbjct: 86 DNAKLRRGRPSVHAAFGEPLAVLAGDALIVLAFQTLA--KSRCSPLRLARLIETIGDAVG 143 Query: 156 L-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + G+ GQ + + E ID + + KTGAL FA + + A A + E R G Sbjct: 144 VPHGIAAGQAWECEPE-IDLSH---YHRSKTGAL--FAAATISGAAAAGHADPEAWRSLG 197 Query: 215 ENLGIIFQLADDLLDCEED 233 E +G +Q+ADD+ D D Sbjct: 198 EKIGEAYQVADDIRDAASD 216 >gi|304316531|ref|YP_003851676.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778033|gb|ADL68592.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 319 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 121/226 (53%), Gaps = 21/226 (9%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 ++++ K+ID L + + ++ D +LS GGK++R LV A L N Sbjct: 8 VKDDMKKIDDFLLSNIKTNSPTIKKAVEDLVLS-------GGKRVRPLLVIAIARLGEYN 60 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + A+IE +H +L+HDD+ +D+ +RRG+ +V +Y + TA+ G+ L + AF Sbjct: 61 EDKIIPIAASIEIMHMATLVHDDI--IDDSKMRRGRESVQSKYGKETAVFTGDFLFSQAF 118 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KT 185 +I+ +I S+ L L G++ + G++ + + +D + + ++++ KT Sbjct: 119 NVIA--------DIISKENLKLIAR-GVKAICEGEIEQFDNRYNLDISVLRYLKRIYRKT 169 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L +CESGA A S+ +R FG N+G+ FQ+ADD+LD E Sbjct: 170 ALLFAISCESGATQAGLSKELTRAMRRFGLNVGMAFQIADDILDYE 215 >gi|311748420|ref|ZP_07722205.1| polyprenyl synthetase [Algoriphagus sp. PR1] gi|126576932|gb|EAZ81180.1| polyprenyl synthetase [Algoriphagus sp. PR1] Length = 328 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 12/203 (5%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L I Y L +GGK+IR L ++ N L +AIE H ++L+HDD+ MD Sbjct: 29 ELYEPINYILNIGGKRIRPLLSLLAYGMYAENPGKILSQASAIEVFHNFTLMHDDI--MD 86 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG TVH ++D AI++G+ +L A++++ + L I N Sbjct: 87 QAPLRRGNATVHEKWDANIAILSGDVMLVKAYDLLMETEPALLPEIIRLF------NKTA 140 Query: 157 QGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ D+ E ++E + ++KT L+ A + GAI+ AS +E RL F Sbjct: 141 ADVCEGQQFDMNFENQDHVNEKDYLNMIRLKTAVLLGCALKMGAILGGASSDEAHRLYEF 200 Query: 214 GENLGIIFQLADDLLDCEEDLPK 236 G N+GI FQL DDLLD D K Sbjct: 201 GVNVGIGFQLKDDLLDVFADQEK 223 >gi|282877390|ref|ZP_06286213.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310] gi|281300442|gb|EFA92788.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310] Length = 324 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 79/229 (34%), Positives = 115/229 (50%), Gaps = 21/229 (9%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 QE K ++ LD L A Q +H L I Y L LGGK+IR L+ +L+ + Sbjct: 5 QEILKLVNNHLDSL----ADERQPRH---LYEPIEYVLSLGGKRIRPTLMLLAYNLYREH 57 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L IE H Y+L+HDDL MD +RRG TVH ++D TAI++G+ +L A+ Sbjct: 58 PEDILMPACGIETYHNYTLLHDDL--MDQADLRRGHETVHKRWDANTAILSGDSMLVLAY 115 Query: 129 EIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMK 184 + ++ + +LK+ I L IG GQ D+ E + E + + ++K Sbjct: 116 QRMAQCRPDKLKEVI--DLFTQTALEIG-----EGQQYDMDFEHRNDVTEDEYIEMIRLK 168 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T L+ A + GAI+ AS + L FGE +G+ FQL DD LD D Sbjct: 169 TSVLLACALKIGAILGDASAEDANNLYRFGEKIGLAFQLQDDFLDVYGD 217 >gi|163786604|ref|ZP_02181052.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1] gi|159878464|gb|EDP72520.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1] Length = 330 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + L + I Y L LGGK++R L A +F A+ ++E H +SL+HDD+ M Sbjct: 31 NNLYAPINYILKLGGKRLRPVLTLMTAEVFGEEAKNAMNAALSVEVFHNFSLVHDDI--M 88 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D +RRGK TVH +++ T I++G+ +L A+ QL +N + L+L Sbjct: 89 DEAPLRRGKKTVHEKWNLNTGILSGDAMLILAY--------QLFENYEPETFLALAKLFS 140 Query: 156 LQGM--LGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERL 210 + GQ DI E ++ + KM KT L+ A + GAI+A AS ++ + Sbjct: 141 KTALEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLVGAAMKMGAIVAKASAEDQNAI 200 Query: 211 RCFGENLGIIFQLADDLLDC 230 FG LG+ FQL DD LD Sbjct: 201 YDFGSYLGVAFQLQDDYLDA 220 >gi|332662624|ref|YP_004445412.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100] gi|332331438|gb|AEE48539.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100] Length = 323 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 107/196 (54%), Gaps = 11/196 (5%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + + Y + LGGK++R L LF ++ AL + AIE H +SL+HDD+ MD Sbjct: 25 LYAPVNYIMELGGKRLRPILALMGYELFKADYRPALPLAYAIEIFHNFSLVHDDV--MDA 82 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+ TVH +++ AI++G+ +L YA++ + +L R ++ + + + + Sbjct: 83 APLRRGQATVHTKWNLNAAILSGDVMLIYAYDYL----LRLDAPNRIAEIVKVFNRVARE 138 Query: 158 GMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ LDI E + + + ++KT L+ A E + A AS ++ + L FG Sbjct: 139 -VCEGQQLDIDFETRSDVSIPEYLRMIELKTSVLIAGALEMAGLAAGASMDDVQHLYEFG 197 Query: 215 ENLGIIFQLADDLLDC 230 N+GI FQL DD+LD Sbjct: 198 RNVGIAFQLQDDILDT 213 >gi|270292608|ref|ZP_06198819.1| geranyltranstransferase [Streptococcus sp. M143] gi|270278587|gb|EFA24433.1| geranyltranstransferase [Streptococcus sp. M143] Length = 291 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 116/203 (57%), Gaps = 10/203 (4%) Query: 36 NDRLLSAIRYALL-----GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIH 89 + + S++R ++L GGK+IR FL+ E V A +V AA+E IH SLIH Sbjct: 20 DQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHAQVAAALEMIHTGSLIH 79 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP+MD+ RRG+ T H ++ E AI+AG+ L + +I+ + L I+ L+ + Sbjct: 80 DDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDPYALIA--QADLPSQIKVDLIAN 137 Query: 150 LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L+ G GM+ GQ+LD++ E + ++ I KTG L+ + ++ AI+A + + Sbjct: 138 LSLASGSLGMVAGQVLDMEGEHQHLSLKELQTIHANKTGKLLAYPFQAAAIIAELAPEMQ 197 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 +L+ GE +G+ FQ+ DD+LD Sbjct: 198 AKLKTVGELIGLAFQVRDDVLDV 220 >gi|120437409|ref|YP_863095.1| isoprenyl synthetase [Gramella forsetii KT0803] gi|117579559|emb|CAL68028.1| isoprenyl synthetase [Gramella forsetii KT0803] Length = 324 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 96/185 (51%), Gaps = 11/185 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV +F+ N+ AL AIE H +SL+HDD+ MD+ +RRGK TVH Sbjct: 38 GGKRLRPVLVLMATEIFDCNYKKALDAALAIEIFHNFSLVHDDI--MDDAPLRRGKETVH 95 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D T I++G+ +L A+++ S + D + LS + GQ DI Sbjct: 96 EKWDINTGILSGDAMLINAYQLFESYEG---DTFKE---LSKLFTKTAIEVCEGQQYDID 149 Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D + KM KT L+ + + GAI+A S KE + +G LGI FQL D Sbjct: 150 FETRDNVSIENYLKMIEYKTAVLVGASLQMGAIVAQTSTACKEAIYQYGRLLGIAFQLQD 209 Query: 226 DLLDC 230 D LD Sbjct: 210 DYLDA 214 >gi|194333227|ref|YP_002015087.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271] gi|194311045|gb|ACF45440.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271] Length = 337 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 121/234 (51%), Gaps = 21/234 (8%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63 + +K +E KRI+ L ++ + L + RY L G GK+IR FL A Sbjct: 15 VETKYKEYHKRINDALAGCFTKSTP-------ETLYAPARYILEGKGKRIRPFLTLLAAE 67 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + AL +E +H ++L+HDD+ MD +R G+PTVH+++DE AI++G+ + Sbjct: 68 SVCNSSDDALNAALGVEILHNFTLMHDDI--MDQADLRHGRPTVHLKWDENAAILSGDMM 125 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF----M 179 + +A+E + KT R ++ + ++ + + GQ LD++ E E + M Sbjct: 126 IAFAYECALNTKTD-----RHAELVHILNDANIT-ICEGQALDMELEQRAEATIADYLDM 179 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I K KTG L+ A E+G ++ +A + + L FGE +G FQ+ DD LD D Sbjct: 180 ISK-KTGRLISAALEAGGVVGNADALQLQALVTFGEKIGRAFQVQDDYLDIMAD 232 >gi|291298290|ref|YP_003509568.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728] gi|290567510|gb|ADD40475.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728] Length = 346 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 93/183 (50%), Gaps = 13/183 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV CA + + AL A+E +H +SL+HDD+ +D RR +PT Sbjct: 62 GKAIRPALVLLCARAVGSSDIEALPAAVAVELVHNFSLVHDDV--IDRDVTRRHRPTAWS 119 Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + AI+AG+ + T A +++ S D I+ N +Q ++ GQ D+ Sbjct: 120 VFGDGAAILAGDAMSTLACAVLADSGHPAAMDGIK-------LVNRAIQELIDGQHADVS 172 Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E ID + + KTGAL+ AC GA S ++ ERLR FG +LG+ FQ D Sbjct: 173 FETREQIDPQECRAMAAAKTGALLGCACAIGARFGGGSPHQVERLRAFGTDLGLAFQHVD 232 Query: 226 DLL 228 DLL Sbjct: 233 DLL 235 >gi|289167859|ref|YP_003446128.1| farnesyl diphosphate synthase [Streptococcus mitis B6] gi|288907426|emb|CBJ22263.1| farnesyl diphosphate synthase [Streptococcus mitis B6] Length = 291 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 126/229 (55%), Gaps = 16/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E + Sbjct: 2 KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALH 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + A +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 IAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++E Q I Sbjct: 116 DPYVLIA--QADLPSQIKVDLISNLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEMQVKLKIVGELIGLAFQVRDDVLDV 220 >gi|312891447|ref|ZP_07750964.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603] gi|311296141|gb|EFQ73293.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603] Length = 324 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 113/206 (54%), Gaps = 17/206 (8%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L I Y + LGGK++R L+ +F + AL AIE H ++L+HDD+ MD Sbjct: 26 ELYEPIYYIMALGGKRLRPCLLLMACDMFGGDVQQALAPALAIEVFHNFTLMHDDI--MD 83 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 +RRGKPTVH +++ AI++G+ ++ A ++I Q+ D I + L + ++ + Sbjct: 84 KAPLRRGKPTVHEKWNANVAILSGDVMMVEANKLI----MQVDDRILRPV-LDVFNDTAV 138 Query: 157 QGMLGGQMLDIQDEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G+ GQ +D+ E IDE + MI ++KT L+ A + GA++ A E L Sbjct: 139 -GVCEGQQIDMNFETLTHVTIDEY-INMI-RLKTAVLVAGALKMGALVGGADDAEASLLY 195 Query: 212 CFGENLGIIFQLADDLLDCEEDLPKK 237 FGE LGI FQL DD+LD D PKK Sbjct: 196 SFGEQLGIAFQLQDDILDVYGD-PKK 220 >gi|329961528|ref|ZP_08299609.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057] gi|328531740|gb|EGF58569.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057] Length = 324 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 18/222 (8%) Query: 22 DLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LL + SH+ T+ L + Y L +GGK+IR L+ +L+ + Sbjct: 6 ELLEKINSHIADLKFTRTPQGLYDPVSYVLSMGGKRIRPVLMLMAYNLYKEDLARIYGPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PK 135 IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A+ ++ P Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLVLAYRFMAQCPV 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 LK+ + + SLT L+ + GQ +D++ E + E + + ++KTG L+ + Sbjct: 124 DCLKEVME---LFSLT---ALE-ICEGQQMDMEFELRKDVREEEYLEMIRLKTGVLLAAS 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + GA++ AS + L FG NLG+ FQL DDLLD D+ Sbjct: 177 LKIGALLGGASAEDAGHLYDFGMNLGVAFQLKDDLLDVYGDV 218 >gi|319938731|ref|ZP_08013095.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV] gi|319811781|gb|EFW08047.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV] Length = 300 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 74/196 (37%), Positives = 116/196 (59%), Gaps = 6/196 (3%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L+ AI Y++ GGK+IR L+ E + A +V AA+E IH SLIHDDLP+MD Sbjct: 27 LIEAILYSVNAGGKRIRPLLLLELLEGLGLELTEAHFQVAAALEMIHTGSLIHDDLPAMD 86 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + RRG+ T H ++ E AI+AG+ L ++ +I+ + L I+ L+ L+ G Sbjct: 87 DDDYRRGRLTSHKKFGEAMAILAGDSLFLDSYALIA--EAALPSQIKVNLIAELSLAAGT 144 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ+LD+Q E D + ++ I KTG L+ + + ++A +Q ++E+LR G Sbjct: 145 FGMVGGQVLDMQGEGKDISLAELQNIHANKTGKLLTYPFIAAGLIAEVAQPQQEKLRKIG 204 Query: 215 ENLGIIFQLADDLLDC 230 + LG+ FQ+ DD+LD Sbjct: 205 QLLGLAFQVRDDILDI 220 >gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor] gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor] Length = 371 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 16/205 (7%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RYALL GGK++R L ++ A+ AA+E +H SL+HDDLP MD+ Sbjct: 99 LHDAMRYALLAGGKRVRPALCLAACAVVGGPEAWAMPAAAAVEMVHTMSLVHDDLPCMDD 158 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---------PKTQLKDNIRSQLML 148 +RRGKPT H+ Y E A++AG+ LL+ +F ++S P+ +R+ + Sbjct: 159 DDLRRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPDVDPEKHPARVVRA--IG 216 Query: 149 SLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 L IG +G++ GQ++D++ E + ++ I KT AL+ + GAI+ + Sbjct: 217 ELARCIGSEGLVAGQVVDLEMTGTSEPVPLERLEYIHLHKTAALLEASVVIGAIIGGGTD 276 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 + ERLR + ++G++FQ+ DD+LD Sbjct: 277 EQIERLRKYARSIGLLFQVVDDILD 301 >gi|295136374|ref|YP_003587050.1| isoprenyl synthetase [Zunongwangia profunda SM-A87] gi|294984389|gb|ADF54854.1| isoprenyl synthetase [Zunongwangia profunda SM-A87] Length = 324 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 101/192 (52%), Gaps = 12/192 (6%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 LGGK++R LV +F+ ++ AL AIE H +SL+HDD+ MD+ +RRGK TV Sbjct: 37 LGGKRLRPVLVLMATEIFDKDYKKALDASLAIEIFHNFSLVHDDI--MDDAPLRRGKATV 94 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++D T I++G+ +L A+++ + + D + L I + GQ DI Sbjct: 95 HEKWDVNTGILSGDAMLINAYQLFENYEG---DTFKELAQLFTKTAIEV---CEGQQYDI 148 Query: 168 QDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E D+ + KM KT L+ + + GAI+A + K+ + FG LGI FQL Sbjct: 149 DFETRDDVSIDDYLKMIEYKTAVLVGASLQMGAIVAEVDEECKKAIYQFGRLLGIAFQLQ 208 Query: 225 DDLLDCEEDLPK 236 DD LD D PK Sbjct: 209 DDFLDAFGD-PK 219 >gi|119356223|ref|YP_910867.1| polyprenyl synthetase [Chlorobium phaeobacteroides DSM 266] gi|119353572|gb|ABL64443.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Chlorobium phaeobacteroides DSM 266] Length = 332 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 16/201 (7%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + +Y L G GK+IR FL + + AL+V A+E +H ++L+HDD+ MD Sbjct: 37 LYAPAKYILDGKGKRIRPFLTLLASEAVCGSSEHALKVALAVEILHNFTLMHDDI--MDQ 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGL 156 +R G+PTVH Q++ AI++G+ ++ YA+E+ + SP ++ Q+ L N Sbjct: 95 AELRHGRPTVHKQWNANVAILSGDMMIAYAYELALQSPSSR-------QIELVHILNDAN 147 Query: 157 QGMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 + GQ LDI+ E + MI K K+G L+ A E+G + +A+ + L Sbjct: 148 ITICEGQALDIELEEKKHATIADYLDMIAK-KSGRLISAALEAGGVAGNATDEQLNNLVT 206 Query: 213 FGENLGIIFQLADDLLDCEED 233 FGE +G FQ+ DD LD D Sbjct: 207 FGEKIGRAFQIQDDFLDIMAD 227 >gi|91215079|ref|ZP_01252051.1| putative isoprenoid biosynthesis related protein [Psychroflexus torquis ATCC 700755] gi|91186684|gb|EAS73055.1| putative isoprenoid biosynthesis related protein [Psychroflexus torquis ATCC 700755] Length = 324 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 14/197 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK++R LV A +F A+ AIE H +SL+HDD+ MD+ Sbjct: 27 LYEPIEYILGLGGKRLRPVLVLMSADIFGGGREKAMDAALAIEIFHNFSLVHDDI--MDD 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+ TVH +++ T I++G+ +L A+++ + P K + L + Sbjct: 85 APLRRGQQTVHEKWNINTGILSGDAMLINAYQLFENYPAEHFKP------LAELFTKTAI 138 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCF 213 + + GQ D+ E D+ + KM KT L+ A + GAI++ SQN + ++ F Sbjct: 139 E-VCEGQQYDVDFEERDDVTIEEYLKMIEYKTAVLVGAALKMGAILSDVSQNVQNKIYEF 197 Query: 214 GENLGIIFQLADDLLDC 230 G LGI FQ+ DD LD Sbjct: 198 GRLLGIAFQIQDDYLDT 214 >gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii] gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii] Length = 261 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 9/198 (4%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+RYA+ GG++ L A+ A+E I + DDLPS+D+ +R Sbjct: 4 AMRYAVGGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDSELR 63 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 GKPTVH + TA+ AG LL FE +++ + + ++++ + IG G+L Sbjct: 64 HGKPTVHRAFGIPTALFAGTALLALGFEHLAA---RYSGDTAARMVAEVGRAIGSTGLLA 120 Query: 162 GQMLDIQDEFID-----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 GQ +D+ E D ET F + KT AL+ + +GAI AS+ E E LR +G Sbjct: 121 GQAVDLGIENPDRGVELETLEF-VHLHKTSALLEASLVAGAIAGGASEQEIEALRAYGRV 179 Query: 217 LGIIFQLADDLLDCEEDL 234 G+++Q+ DD+ D + + Sbjct: 180 TGLLYQIVDDVADATKTM 197 >gi|212696081|ref|ZP_03304209.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM 7454] gi|212676710|gb|EEB36317.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM 7454] Length = 279 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 15/227 (6%) Query: 12 NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 N K D IL D ++ A + ++ L A+ YA GK+IR + E + + Sbjct: 5 NKKEFDRILNTDKKIIDQAMKEKFVDDNPLNEALIYASDSGKRIRPIVFLETCRMLLGDK 64 Query: 70 L--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L + ++E +H YSL+HDD+P MDN RRGK TVH ++ E AI+ G+ LL++A Sbjct: 65 LDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAILVGDSLLSFA 124 Query: 128 FEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQK 182 FE I L +I Q L L G GM+ GQ+ DI+ ++ + + + + K Sbjct: 125 FENI------LNLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSYILDVYK 178 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L A + + +L + LG+ FQL DD+LD Sbjct: 179 NKTSRLFMAALMMAGLYCQLDDEKLTKLENYAYYLGMAFQLQDDILD 225 >gi|294676241|ref|YP_003576856.1| farnesyltranstransferase [Rhodobacter capsulatus SB 1003] gi|117510|sp|P17060|CRTE_RHOCA RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; AltName: Full=Farnesyltranstransferase gi|46003|emb|CAA36538.1| unnamed protein product [Rhodobacter capsulatus SB 1003] gi|46128|emb|CAA77545.1| 289 aa (30 kD) phytoene synthase [Rhodobacter capsulatus] gi|294475061|gb|ADE84449.1| farnesyltranstransferase [Rhodobacter capsulatus SB 1003] gi|227044|prf||1613414G crtE gene Length = 289 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 75/221 (33%), Positives = 108/221 (48%), Gaps = 16/221 (7%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 KRI++ L L A + L +A+ Y + GG +IR ++ A L + A Sbjct: 5 KRIESALVKALSPEA---LGESPPLLAAALPYGVFPGGARIRPTILVSVA-LACGDDCPA 60 Query: 73 LRVGAAI--ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + AA+ E +HC SL+HDDLP+ DN IRRGKP++H Y+E A++AG+ LL FE+ Sbjct: 61 VTDAAAVALELMHCASLVHDDLPAFDNADIRRGKPSLHKAYNEPLAVLAGDSLLIRGFEV 120 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++ + L L +G L G GG E + + + KTGAL Sbjct: 121 LAD-----VGAVNPDRALKLISKLGQLSGARGGICAGQAWESESKVDLAAYHQAKTGALF 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A + GAI A+ E E G +G FQ+ADDL D Sbjct: 176 IAATQMGAI---AAGYEAEPWFDLGMRIGSAFQIADDLKDA 213 >gi|322389034|ref|ZP_08062602.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 903] gi|321144257|gb|EFX39667.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 903] Length = 291 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 4/164 (2%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +V A+E IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L F +I+ Sbjct: 63 FQVAGALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDALFLDPFGMIA 122 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190 + + L D ++ L+ L+ G +GM+ GQ+LD++ E T ++ I KTG L+ Sbjct: 123 A--SALPDAVKVSLIFELSDASGSRGMVAGQVLDMEGEHKQLTLAELQTIHANKTGRLLA 180 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + + ++ + + L G+ LG+ FQ+ DD+LD D Sbjct: 181 YPFIAAGLILELQADIGQLLEKIGKKLGLAFQVRDDILDLVADF 224 >gi|327469005|gb|EGF14477.1| geranyltranstransferase [Streptococcus sanguinis SK330] Length = 291 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 5/191 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F + A +V AA+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ + +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + I KTG L+ + + ++A A Q +++LR GE LG+ FQ+ D Sbjct: 156 QGEGQAISLEDLKNIHANKTGKLLTYPFVAAGLIAEAEQPVQDKLRRIGELLGLAFQVRD 215 Query: 226 DLLDCEEDLPK 236 D+LD K Sbjct: 216 DILDVTASFEK 226 >gi|167565893|ref|ZP_02358809.1| polyprenyl synthetase [Burkholderia oklahomensis EO147] gi|167572980|ref|ZP_02365854.1| polyprenyl synthetase [Burkholderia oklahomensis C6786] Length = 222 Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 89/159 (55%), Gaps = 8/159 (5%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH +SLI DDLP+MDN R GKP++H +YD TA++A +GL++ AF +S + L + Sbjct: 2 IHVFSLIQDDLPAMDNDDTRHGKPSLHTKYDVATALLACDGLISQAFLTLS--EIPLPTD 59 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM 199 R L L +IG G+ GGQ +D+ ++ ++ + +MKTGAL+ + G + Sbjct: 60 GRVALAHELASSIGSSGLTGGQYIDLTSVGTHLNREELERMHRMKTGALIRASVRMGVLC 119 Query: 200 AHASQNEKE----RLRCFGENLGIIFQLADDLLDCEEDL 234 + E + +G LG+ +Q+ DD+LD DL Sbjct: 120 GSGCRTESSAAWNAMGEYGNLLGLAYQVVDDILDSTSDL 158 >gi|328479791|gb|EGF48907.1| Geranyltranstransferase [Lactobacillus rhamnosus MTCC 5462] Length = 252 Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 6/186 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ ++++ AL AA+E +H YSLIHDDLP+MDN +RRG+PT H Sbjct: 8 GGKRLRPLLLLSVVAMYDGVVAEALPAAAALEFVHTYSLIHDDLPAMDNDDLRRGQPTNH 67 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Q+ E AI+AG+ LLT AF I+S Q + L+ L G GM+ GQ+LD+ Sbjct: 68 KQFGEALAILAGDALLTDAFAILS----QHYPEKGAALVQILAEAAGSSGMVAGQVLDMD 123 Query: 169 DEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E D + + + KTGAL+ G++ + ++ L F G+ FQ+ DD Sbjct: 124 GEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAIPEADQAALADFAAAFGLGFQIKDD 183 Query: 227 LLDCEE 232 + D + Sbjct: 184 INDVTK 189 >gi|125717531|ref|YP_001034664.1| farnesyl diphosphate synthase [Streptococcus sanguinis SK36] gi|125497448|gb|ABN44114.1| Farnesyl diphosphate synthase, putative [Streptococcus sanguinis SK36] Length = 291 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 114/201 (56%), Gaps = 6/201 (2%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDD 91 Q + L I Y++ GGK+IR L+ E F + A +V AA+E IH SLIHDD Sbjct: 22 QVSSDLAEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDD 81 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ RRG+ T H ++ E AI+AG+ L + +++ + +L ++ L+ L+ Sbjct: 82 LPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELS 139 Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G GM+ GQ+LD+Q E I + +I KTG L+ + + ++ A Q+ +++ Sbjct: 140 LAAGSFGMVAGQVLDMQGEGQAISLEDLKIIHANKTGKLLTYPFVAAGLIVQAQQSVQDK 199 Query: 210 LRCFGENLGIIFQLADDLLDC 230 LR GE LG+ FQ+ DD+LD Sbjct: 200 LRRIGELLGLAFQVRDDILDV 220 >gi|89148075|gb|ABC46867.3| geranylgeranyl diphosphate synthase [Stevia rebaudiana] Length = 147 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 84/146 (57%), Gaps = 2/146 (1%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH SL+HDDLP +DN RRGKPT H Y E A++ G+ LL+ +FE I++ + + Sbjct: 2 IHTMSLVHDDLPCVDNDDFRRGKPTSHKVYGEEMAVLTGDALLSLSFEHIATATKGVSKD 61 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIM 199 +++ L ++G +G++ GQ++DI E D + I KT L+ + GAIM Sbjct: 62 RIVRVIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIGAIM 121 Query: 200 AHASQNEKERLRCFGENLGIIFQLAD 225 S + E+LR F ++G++FQ+ D Sbjct: 122 GGGSDQQIEKLRKFARSIGLLFQVVD 147 >gi|325688242|gb|EGD30261.1| geranyltranstransferase [Streptococcus sanguinis SK72] Length = 291 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 107/185 (57%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F + A +V AA+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ +++L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RSELPSQVKVDLIYELSLAAGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + I KTG L+ + + ++A Q+ +++LR GE LG+ FQ+ D Sbjct: 156 QGEGQAISLEDLKNIHANKTGKLLTYPFVAAGLIAEVEQSVQDKLRRIGELLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|307297796|ref|ZP_07577602.1| Polyprenyl synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306917056|gb|EFN47438.1| Polyprenyl synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 279 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 96/187 (51%), Gaps = 10/187 (5%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 L GGK++R++L+ E + AL+ G A+E H SLIHDDLP++DN IRRG P Sbjct: 35 PLAGGKRLRAYLIWELSRYTGFGEENALKAGIAVELFHSGSLIHDDLPAIDNDTIRRGLP 94 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + HI++ E AI+AG+ L+ + + SS + + +L L L+ ++ G+ Sbjct: 95 SSHIKFGESKAILAGDFLMLFPGRVFSSLDLETR---YIHPILELWQETSLK-VVEGEFD 150 Query: 166 DIQDEFIDETQVFMIQKMKTGAL--MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D+ E Q+ I KTGAL CFA A + + + + G G ++Q+ Sbjct: 151 DVFPEDESREQMERIHAAKTGALFGFCFA----APFIREKREKIDEMYKLGVRFGKLYQM 206 Query: 224 ADDLLDC 230 DD+ D Sbjct: 207 MDDIKDV 213 >gi|307822417|ref|ZP_07652649.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96] gi|307736983|gb|EFO07828.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96] Length = 298 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 115/202 (56%), Gaps = 7/202 (3%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RY+ L GGK++R L + A+E IH YSLIHDDLP+MD Sbjct: 33 KLHRAMRYSTLDGGKRMRPMLTYCTGKTLGIAPEALDGPACAVEFIHVYSLIHDDLPAMD 92 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIG 155 + +RRGK T H+ +DE TAI+ G+ L AFEI+++ P R +++++LT G Sbjct: 93 DDDLRRGKATCHVAFDEATAILTGDALQALAFEILANDPSITATAEGRLKMIIALTKASG 152 Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLR 211 QGM+GGQ +D++ T ++ + KTGAL+ A + A +A A + ++L Sbjct: 153 SQGMVGGQAIDLESVGTKLTLPELENMHIHKTGALI-RASVNMATLAKADIDPDVAKKLD 211 Query: 212 CFGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD E D Sbjct: 212 NYAKCIGLSFQVKDDILDEESD 233 >gi|332968796|gb|EGK07844.1| geranyltranstransferase [Psychrobacter sp. 1501(2011)] Length = 315 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 26/214 (12%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGA-----------------AIE 80 L A YA+ G GK++R L+ CA + TA+ GA A+E Sbjct: 36 LKEACHYAMTGQGKRVRP-LMAACAYHTVIYSNTAVDSGAETLSDSVLTDNCRRAMLAVE 94 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT---Q 137 +H YSLIHDDLP MD+ +RRG+PT HI++DE TA++ G+ L T AFEI+++ Sbjct: 95 FLHTYSLIHDDLPCMDDDDLRRGRPTCHIKFDEATAMLTGDVLQTLAFEILTADIEGFQP 154 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACES 195 + D ++L+ + M+ GQMLD+ E + TQ + I + KTGAL+ A Sbjct: 155 ISDEQAAKLLTVFAPRA--RRMVSGQMLDLNAENKEITQAELEAIHRDKTGALIEAAVLM 212 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 G + A AS + + F N+G+ FQ+ DD+LD Sbjct: 213 GGVCAEASAEQLAAMTQFATNIGLAFQVQDDILD 246 >gi|224025695|ref|ZP_03644061.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM 18228] gi|224018931|gb|EEF76929.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM 18228] Length = 327 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 108/198 (54%), Gaps = 15/198 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK++R L+ +L+ + + A IE H ++L+HDDL MDN Sbjct: 29 LYDPIEYVLALGGKRLRPVLMLLAYNLYREDVESIFSQAAGIETYHNFTLLHDDL--MDN 86 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 +RRGKP VH +++E TAI++G+ +L +Y F + P +++ ++ + Sbjct: 87 ADMRRGKPVVHKKWNENTAILSGDAMLILSYQFMMNQCPPEHVQE------VMEIFGRTA 140 Query: 156 LQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 L+ + GQ D++ E ++ V + ++KT L+ A + GA++ AS + ++L Sbjct: 141 LE-VCEGQQWDMEFESRNDVTVGEYIEMIRLKTSVLLAAALKIGAVLGGASSADAQKLYD 199 Query: 213 FGENLGIIFQLADDLLDC 230 FG +G+ FQL DD LD Sbjct: 200 FGIRMGLAFQLQDDYLDV 217 >gi|219852944|ref|YP_002467376.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c] gi|219547203|gb|ACL17653.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c] Length = 320 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 101/186 (54%), Gaps = 12/186 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R ++ A L A A+E H ++LIHDD+ MD +RRG PTV Sbjct: 40 GGKRLRPAVMMLAADAVRKGSSDDLMPAAIALELTHSFTLIHDDI--MDGDEVRRGVPTV 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++DE TAI+AG+ L AF I +R+ ML++T + + GQ LD+ Sbjct: 98 NKKWDEPTAILAGDVLYARAFAFICQALAMDAAKLRAVSMLAVT----CEEICAGQHLDM 153 Query: 168 ----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 +D+ +E + M+ K KTGAL + G ++A SQ + + L +G N+G+ FQ+ Sbjct: 154 AFEDRDDVSEEEYLEMVGK-KTGALYAASTAMGGVLAGGSQPQVDALYRYGMNIGVAFQI 212 Query: 224 ADDLLD 229 DDL+D Sbjct: 213 QDDLID 218 >gi|313901601|ref|ZP_07835040.1| farnesyl-diphosphate synthase [Thermaerobacter subterraneus DSM 13965] gi|313468131|gb|EFR63606.1| farnesyl-diphosphate synthase [Thermaerobacter subterraneus DSM 13965] Length = 328 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 109/209 (52%), Gaps = 8/209 (3%) Query: 33 TQHNDRLLSAIRYA-LLGGKKIRSFLV---TECASLFNVNHLTALRVGAAIECIHCYSLI 88 T R+ A+RY+ L GGK +R L+ C V R AA+E +H YSLI Sbjct: 55 TAPPSRIHEAMRYSTLAGGKALRPVLLMAAARCVGGPQVVTPAVERAAAAVELVHTYSLI 114 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLM 147 HDDLP+MD+ +RRG+P H+ + E AI+AG+ LLT AFE+++ P+ + ++ Sbjct: 115 HDDLPAMDDDDMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADPAVALAVV 174 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 L G G++GGQ+ D+ +D + I + KTGAL GA +A A+ Sbjct: 175 EELAVAAGTAGLIGGQVDDLAATTAAGLDLAGLQSIHRRKTGALFRACVRMGARLAGATA 234 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 E E L F G FQ+ DD+LD D Sbjct: 235 TELEALTAFATAFGEAFQIVDDILDVTGD 263 >gi|304393689|ref|ZP_07375617.1| geranyltranstransferase [Ahrensia sp. R2A130] gi|303294696|gb|EFL89068.1| geranyltranstransferase [Ahrensia sp. R2A130] Length = 289 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 16/223 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69 +N+ RI+ L+ L + A+ +L +A+ A+ GG ++R L A +H Sbjct: 2 DNAARIEECLERSLSRAAN---ADCPPKLRAAVHSAVFPGGARVRPQLTLAVAEACG-DH 57 Query: 70 LTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L GAA IE +HC SL+HDDLP D+ +RRGKPT+H Y E A++ G+ L+ A Sbjct: 58 EIELVDGAAAAIELLHCASLVHDDLPCFDDADLRRGKPTIHSLYGEEIAVLTGDALIIEA 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 F + + Q + + L+ ++ G+ G+ GQ + +D +D V KTG Sbjct: 118 FNTLCASSAQHPSRLPA-LVAAVCAATGMTTGITAGQAWESED-VVD---VERYHCAKTG 172 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +L A +GA+ A ++ R G +G +QLADDLLD Sbjct: 173 SLFVGAVCAGAL---AVGSDPLPWRSLGSRIGAAYQLADDLLD 212 >gi|167042947|gb|ABZ07661.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote HF4000_ANIW137N18] Length = 273 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 15/164 (9%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+ +A+E IH ++L+HDD+ MDN +R G PT H ++D AI+AG+ L + A+ I Sbjct: 9 AIAAASAVEMIHNFTLVHDDI--MDNDEMRHGVPTTHKKFDMPLAILAGDVLYSKAYHTI 66 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-------FMIQKMK 184 SS K++L N +QL+ L+ + GQ+ DI+ F + ++ MI+K K Sbjct: 67 SS-KSKLSSNYTTQLVSKLSKT--CVEICEGQVGDIK--FAENKRIPTGKEYIKMIEK-K 120 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 T L +C GAI A Q + + L FG+NLGI+FQ+ DDLL Sbjct: 121 TAVLFEVSCAMGAICAKRKQKDVKNLSSFGKNLGIVFQITDDLL 164 >gi|288926232|ref|ZP_06420158.1| polyprenyl synthetase [Prevotella buccae D17] gi|288337011|gb|EFC75371.1| polyprenyl synthetase [Prevotella buccae D17] Length = 323 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 120/221 (54%), Gaps = 17/221 (7%) Query: 21 DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D+LL ++ + DR L + I+Y L +GGK+IR L+ +LF + L Sbjct: 5 DELLQLINRYLDSLPYDRKPASLYAPIKYVLSMGGKRIRPTLMLLAYNLFKDDPEKILSS 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E H Y+L+HDDL MDN +RRG+PTVH +++ A+++G+ +L A++ ++ Sbjct: 65 ACALETYHNYTLLHDDL--MDNADVRRGQPTVHKKWNANLAVLSGDSMLVLAYQRMTECD 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 + L + +R L IG GQ +D++ E + E + + ++KT L+ A Sbjct: 123 SHLAEVLR--LFTETALEIG-----EGQQMDMEFETRNDVREEEYIEMIRLKTSVLLACA 175 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA++A A ++ + L FGE +G+ FQL DD LD D Sbjct: 176 MKIGALLADAPADDADNLYRFGEKIGLAFQLQDDYLDVYGD 216 >gi|323352717|ref|ZP_08087687.1| geranyltranstransferase [Streptococcus sanguinis VMC66] gi|322121753|gb|EFX93499.1| geranyltranstransferase [Streptococcus sanguinis VMC66] Length = 291 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 107/185 (57%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F + A +V AA+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ + +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLASGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + +I KTG L+ + + ++ A Q+ +++LR GE LG+ FQ+ D Sbjct: 156 QGEGQAISLEDLKIIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|172057807|ref|YP_001814267.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15] gi|171990328|gb|ACB61250.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15] Length = 320 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V + + +RV A++E +H SL+HDD+ +D+ +RRGKPTV Sbjct: 43 GGKRIRPAFVLLASKFGQADRDELVRVAASLELVHMASLVHDDV--IDDAELRRGKPTVM 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +DE A+ +GN L A ++I + +L+ + H ++ + G++ I Sbjct: 101 QHFDEEVALYSGNFLFGEAVKLIGEVG-------KPELVQVMVH--AMREICEGEIEQIY 151 Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ E + K KT L+ +C GAI+A+ S + + LR FG ++G+ FQ+AD Sbjct: 152 DQYDWEQSIKRYIKRIERKTAILIEASCHLGAIVANCSPEDTKALRQFGRDIGLAFQIAD 211 Query: 226 DLLD 229 DLLD Sbjct: 212 DLLD 215 >gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera] Length = 301 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 39/219 (17%) Query: 20 LDDLLLQTASHMQTQHND--------RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 D ++Q AS + ++ ++ A+RY+LL G K + + CA Sbjct: 70 FKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKRSNAMPAACA--------- 120 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 +E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ LL +AFE + Sbjct: 121 -------VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEHL 173 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTG 186 ++ + + + + L +IG +G++ GQ++DI D +D+ + I KT Sbjct: 174 ATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIH--KTA 231 Query: 187 ALMCFACESGAIMAHASQNEK--------ERLRCFGENL 217 AL+ A GA++ S E E+ R F ENL Sbjct: 232 ALLEAAVVLGALLGGGSDEEATYPKLMGLEKSREFAENL 270 >gi|296387401|ref|ZP_06876900.1| geranyltranstransferase [Pseudomonas aeruginosa PAb1] Length = 207 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/188 (35%), Positives = 104/188 (55%), Gaps = 9/188 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 R+D LD L + +Q RL A+RY+++ GGK++R L A Sbjct: 12 RVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRAD 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL AFE+++ Sbjct: 67 AAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD 126 Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190 + +++ ML+ L G GM+GGQ +D+ + D+ + ++ + KTGAL+ Sbjct: 127 TRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIE 186 Query: 191 FACESGAI 198 + GA+ Sbjct: 187 ASVRLGAL 194 >gi|315606371|ref|ZP_07881386.1| geranyltranstransferase [Prevotella buccae ATCC 33574] gi|315251777|gb|EFU31751.1| geranyltranstransferase [Prevotella buccae ATCC 33574] Length = 323 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 120/221 (54%), Gaps = 17/221 (7%) Query: 21 DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D+LL ++ + DR L + I+Y L +GGK+IR L+ +LF + L Sbjct: 5 DELLQLINRYLDSLPYDRKPASLYAPIKYVLSMGGKRIRPTLMLLAYNLFKDDPEKILSS 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E H Y+L+HDDL MDN +RRG+PTVH +++ A+++G+ +L A++ ++ Sbjct: 65 ACALETYHNYTLLHDDL--MDNADVRRGQPTVHKKWNANLAVLSGDSMLVLAYQRMTECD 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 + L + +R L IG GQ +D++ E + E + + ++KT L+ A Sbjct: 123 SHLAEVLR--LFTETALEIG-----EGQQMDMEFETRNDVREEEYIEMIRLKTSVLLACA 175 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA++A A ++ + L FGE +G+ FQL DD LD D Sbjct: 176 MKIGALLADAPADDADNLYRFGEKIGLAFQLQDDYLDVYGD 216 >gi|73668941|ref|YP_304956.1| dimethylallyltranstransferase / geranyltranstransferase [Methanosarcina barkeri str. Fusaro] gi|72396103|gb|AAZ70376.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Methanosarcina barkeri str. Fusaro] Length = 321 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 116/229 (50%), Gaps = 17/229 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L ++++ S +D +D+LL H + L A RY + GGK++R ++ A Sbjct: 3 LVDEIKKRSVHVDAAIDELL-------PVAHPEELYKASRYLVDAGGKRLRPAVLILAAE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + L A+E +H ++LIHDD+ MD IRRG P VH + + AI+AG+ L Sbjct: 56 ATGSDLKSVLPAAVAVELVHNFTLIHDDI--MDKDDIRRGMPAVHTIWGDAGAILAGDTL 113 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMI 180 + AFEI+S + + ++ ++S T + GQ LD+ + E + + + + Sbjct: 114 YSKAFEILSKVQNEPARILKCMDVISKT----CTEICEGQWLDMDFEKREKVSKAEYIEM 169 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + KT L A + GA++ AS L +G +GI FQ+ DD+LD Sbjct: 170 VEKKTSVLYAAAAKIGALLGGASDEIAAALSEYGRFIGIGFQMYDDVLD 218 >gi|91774308|ref|YP_567000.1| farnesyltranstransferase [Methanococcoides burtonii DSM 6242] gi|91713323|gb|ABE53250.1| Bifunctional short chain isoprenyl diphosphate synthase [Methanococcoides burtonii DSM 6242] Length = 322 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 108/204 (52%), Gaps = 12/204 (5%) Query: 31 MQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 + H + L A RY GGK++R ++ + ++ + A+E +H ++L+H Sbjct: 22 LPISHPEELYRASRYLPDAGGKRLRPAVLMLSTEAVGGDPMSVIPAAVALELVHNFTLVH 81 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ MDN +RRG P VH+++ AI+AG+ L + AFEI+S + + ++ +LS Sbjct: 82 DDI--MDNDDVRRGMPAVHVKWGSEGAILAGDTLYSKAFEILSVMEKDPERILKCVALLS 139 Query: 150 LTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 T + GQ +DI+ D +E + M++K KT L A + GA++ AS Sbjct: 140 RT----CTEICEGQWMDIEFENRDTVSEEEYLEMVEK-KTSVLYGAAAKVGALLGGASDE 194 Query: 206 EKERLRCFGENLGIIFQLADDLLD 229 + + FG +GI FQ+ DD++D Sbjct: 195 VADAMYEFGRLVGISFQIQDDVID 218 >gi|134100514|ref|YP_001106175.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291005007|ref|ZP_06562980.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133913137|emb|CAM03250.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 345 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 17/191 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK IR LV A + TAL A+E +H +SL+HDD+ MD RR + T Sbjct: 60 GGKAIRPALVVLAAEAVGGSPATALPAAVAVELVHNFSLLHDDV--MDGDLTRRHRATAW 117 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + AI+AG+ LLT A +++++ P Q +R T N + ++ GQ+ Sbjct: 118 RVFGNGPAILAGDALLTLASDVLAASGHPAAQA--GVR-------TLNTAVLELVDGQVA 168 Query: 166 DIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D+ E D+ V Q M KTGAL+ AC GA S + E LR FGE LG+ FQ Sbjct: 169 DLAFEKRDDVGVAECQTMVAGKTGALLGCACAVGADFGGGSTEQVEHLRRFGELLGLAFQ 228 Query: 223 LADDLLDCEED 233 DDLL D Sbjct: 229 HVDDLLGIWGD 239 >gi|227485061|ref|ZP_03915377.1| possible geranyltranstransferase [Anaerococcus lactolyticus ATCC 51172] gi|227236894|gb|EEI86909.1| possible geranyltranstransferase [Anaerococcus lactolyticus ATCC 51172] Length = 276 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 113/200 (56%), Gaps = 14/200 (7%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPS 94 ++L A+ YA GGK+IR+FL E +F N++ L ++ +IE IH YSL+HDDLP+ Sbjct: 30 NKLEEAMVYATDGGKRIRAFLYLETKKMFSQNISELD-YKLAMSIEFIHAYSLVHDDLPA 88 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA----FEIISSPKTQLKDNIRSQLMLSL 150 MD+ RRG+ +VH ++ E I+ G+ LL A F+I + LK S +L Sbjct: 89 MDDDDYRRGQESVHKKFGEDIGILTGDALLNEAALILFDIGIKDSSYLK---ASSYILER 145 Query: 151 THNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 GM+ GQ++D++ E D + + + K KT L AC + A+ ++ ++ + Sbjct: 146 ASRF---GMIEGQVMDLRRESTYDLSYLLEVYKKKTSDLFKAACLAAALTSNQTEYTYRK 202 Query: 210 LRCFGENLGIIFQLADDLLD 229 + F ENLG+ FQ+ DDLL+ Sbjct: 203 IEVFAENLGLAFQIQDDLLE 222 >gi|37528167|ref|NP_931512.1| hypothetical protein plu4337 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787604|emb|CAE16709.1| crtE [Photorhabdus luminescens subsp. laumondii TTO1] Length = 300 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 7/192 (3%) Query: 36 NDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDL 92 +D++ +A+R + L+ GK+IR L+ N L++ +AIE +H SLI DDL Sbjct: 36 DDKVCAAMRESTLVSGKRIRPLLLLLIVLDLGENPWKTDFLQLASAIEIVHAASLILDDL 95 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN RRG+P +H QY E AI+A LL+ AF +I +T L + +S + L+H Sbjct: 96 PCMDNAEYRRGRPAIHRQYGESVAILAAVALLSRAFGLIV--ETNLSEYDKSAAVAILSH 153 Query: 153 NIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 +GL G++ GQ D+ + + + +KTG L + AI +A ++ L Sbjct: 154 TVGLNGLVQGQFRDLNNTLCAGNYHAIATTNDLKTGLLFDTTFQLAAIAVNAPDIIRQAL 213 Query: 211 RCFGENLGIIFQ 222 R ++LG FQ Sbjct: 214 RHVSQHLGQAFQ 225 >gi|78483936|dbj|BAE47470.1| GGPP synthase [Paracoccus sp. N81106] Length = 293 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 2/188 (1%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 AL GK+ R L+ A T + A+E +H SLI DDLP MD+ +RRG+ Sbjct: 39 ALSSGKRFRGMLMLLAAEASGGVCDTIVDAACAVEMVHAASLIFDDLPCMDDAGLRRGQS 98 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 H+ + E A++ G L+T A +++ + +R+QL+ L+ ++G QG+ GQ L Sbjct: 99 ATHVAHGESRAVLGGIALITEAMALLAGARGA-SGTVRAQLVRILSRSLGPQGLCAGQDL 157 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D+ + V Q +KTG L E A++ E+ ++ FG LG +FQ D Sbjct: 158 DLH-AAKNGAGVEQEQDLKTGVLFIAGLEMLAVIKEFDAEEQTQMIDFGRQLGRVFQSYD 216 Query: 226 DLLDCEED 233 DLLD D Sbjct: 217 DLLDVVGD 224 >gi|189345859|ref|YP_001942388.1| Polyprenyl synthetase [Chlorobium limicola DSM 245] gi|189340006|gb|ACD89409.1| Polyprenyl synthetase [Chlorobium limicola DSM 245] Length = 332 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 115/227 (50%), Gaps = 19/227 (8%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67 ++E +R ++D L A + L + RY + G GK+IR FL + Sbjct: 10 VEEKYRRYHKRINDAL---AGCFSADKPETLYAPARYIIEGKGKRIRPFLTLLASESVCG 66 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AL A+E +H ++L+HDD+ MD +R G+P VH Q++ AI++G+ ++ YA Sbjct: 67 SSENALNAALAVEILHNFTLMHDDI--MDAADLRHGRPAVHKQWNTNVAILSGDMMIAYA 124 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEFIDETQVF----MIQK 182 +E+ KT+ +L+ L H NI + GQ LD++ E + MI K Sbjct: 125 YELALQSKTER----HRELIHILNHANITI---CEGQALDMELELKKNATISDYLDMIAK 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTG L+ A E+G + + +Q + L FGE +G FQ+ DD LD Sbjct: 178 -KTGRLISAALEAGGVAGNGTQEQLNALVTFGEKIGRAFQIQDDFLD 223 >gi|325300424|ref|YP_004260341.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170] gi|324319977|gb|ADY37868.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170] Length = 327 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 20/206 (9%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + Y L +GGK+IR L+ +LF + L A+E H ++L+HDDL MD Sbjct: 29 LYKPVEYVLGIGGKRIRPTLMLLAYNLFKEDVHAVLSQAMALETYHNFTLLHDDL--MDK 86 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGL--LTYAFEIISSPKTQLKD--NIRSQLMLSLTHN 153 RRGKPTVH Q+DE AI++G+ + L+Y F + P ++ + SQ L + Sbjct: 87 ADRRRGKPTVHKQWDENAAILSGDAMVMLSYQFMMKDCPAMYVRPVMEVFSQTALEICE- 145 Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 GQ D++ E + + + ++KT L+ A + GAI+ AS+ + ++L Sbjct: 146 --------GQQWDMEFERRQDVTAGEYMEMIRLKTSVLLAGALKIGAILGGASEADAQKL 197 Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236 G +G+ FQL DD LD D PK Sbjct: 198 YDLGIRIGLAFQLQDDYLDVYGD-PK 222 >gi|167043490|gb|ABZ08187.1| putative Polyprenyl synthetase [uncultured marine microorganism HF4000_APKG2H5] Length = 575 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/231 (35%), Positives = 122/231 (52%), Gaps = 30/231 (12%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSF---LVTECASLFNVNH 69 KR++ I+ D L MQ +RL A+ + GG K++R+ LV E + H Sbjct: 261 KRVEGIIMDSL----GKMQ---QERLHGAMTHLFAGGGKRLRAIIPRLVGEAVGEAHDGH 313 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 T +GA+IE IH ++L+HDD+ +D IRRG VH+ YD+ TAI AG+ +L FE Sbjct: 314 YT---LGASIEIIHNFTLVHDDI--IDQDPIRRGLDAVHVAYDDATAINAGDAMLAVGFE 368 Query: 130 IIS-SPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQMLDIQDE----FIDETQVFMIQK 182 I++ SP+ I + + L IG ++ + GQ DI+ E +E + MI Sbjct: 369 ILAESPE------IDADKLAFLVSTIGEMVRKVAEGQQDDIEFEQRNTVTEEDYIAMITG 422 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT A+ +GAI+A AS + + +G NLG+ FQL DDL+D D Sbjct: 423 -KTSAMFETCATTGAILAGASDEIVDNMAIWGLNLGLCFQLMDDLIDITGD 472 >gi|294501072|ref|YP_003564772.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium QM B1551] gi|294351009|gb|ADE71338.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium QM B1551] Length = 321 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 24/216 (11%) Query: 32 QTQHNDRLL---SAIRYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYS 86 QT H D L +++ GGK+IR V A +N++ + V A+E IH S Sbjct: 23 QTVHTDETLITDASLHLLQAGGKRIRPVFVLLAAKFGHYNIDQIK--HVAVALELIHMAS 80 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+HDD+ +D+ RRGKPT+ ++D A+ G+ + A E++S K I S Sbjct: 81 LVHDDV--IDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEVMSEVKDVEAHKILSNT 138 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHAS 203 M+ LT G++ I+D++ +V++ + K KT L+ +C+ GAI A A Sbjct: 139 MVELTL---------GEIEQIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLGAIAAGAP 189 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 ++ +RL FG +G+ FQ+ DD+LD EE L K Sbjct: 190 EDIHKRLFWFGYYVGMSFQITDDILDFISSEEQLGK 225 >gi|118602494|ref|YP_903709.1| farnesyl-diphosphate synthase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567433|gb|ABL02238.1| farnesyl-diphosphate synthase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 284 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 9/206 (4%) Query: 30 HMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 H+ Q + L AIRY+ L GK+ R L A++FN N A+E IH YSLI Sbjct: 17 HLSAQGS--LAKAIRYSTLANGKRFRPILAYCVANIFNTNLNLVDSSSCAVEFIHTYSLI 74 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MD+ IR +P H ++ E AI+AG+GL AFE++ + + +I+ +L+ Sbjct: 75 HDDLPAMDDDDIRHNQPVCHKRFGEAQAILAGDGLQALAFEVLVNDDL-ISADIKIELLK 133 Query: 149 SLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 SLTH M+ GQ +D+ + ++ + + + KTGAL+ A GAI++ N+ Sbjct: 134 SLTH--ASFEMVEGQAIDLSIIAKQVNIATLETMHRKKTGALLSCAVNLGAIVSKMCNNK 191 Query: 207 KER-LRCFGENLGIIFQLADDLLDCE 231 L F +++G+ +Q+ DD+LD E Sbjct: 192 DSVILNTFSKDIGLAYQIQDDVLDIE 217 >gi|325697091|gb|EGD38978.1| geranyltranstransferase [Streptococcus sanguinis SK160] Length = 291 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 113/201 (56%), Gaps = 6/201 (2%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDD 91 Q + L I Y++ GGK+IR L+ E F + A +V AA+E IH SLIHDD Sbjct: 22 QVSSDLTEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDD 81 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ RRG+ T H ++ E AI+AG+ L + +++ + +L ++ L+ L+ Sbjct: 82 LPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELS 139 Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G GM+ GQ+LD+Q E I + I KTG L+ + + ++ A Q+ +++ Sbjct: 140 LAAGSFGMVAGQVLDMQGEGQAISLGDLKTIHANKTGKLLTYPFVAAGLIVQAQQSVQDK 199 Query: 210 LRCFGENLGIIFQLADDLLDC 230 LR GE LG+ FQ+ DD+LD Sbjct: 200 LRRIGELLGLAFQVRDDILDV 220 >gi|193213417|ref|YP_001999370.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] gi|193086894|gb|ACF12170.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] Length = 332 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 22/211 (10%) Query: 28 ASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86 A+ Q + L + RY L G GK+IR FL + + + AL V IE +H ++ Sbjct: 26 AACFPKQSPETLYAPARYILEGKGKRIRPFLTLLASEAVSGSSENALGVALGIEVLHNFT 85 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI----ISSPKTQLKDNI 142 L+HDD+ MD +R G+PTVH Q+D AI++G+ ++ YA+E+ ISS Sbjct: 86 LMHDDI--MDAADLRHGRPTVHKQWDVNAAILSGDMMIAYAYELALKAISS--------- 134 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAI 198 R M+ + ++ + + GQ LD++ E + + MI K KTG L+ A E+G + Sbjct: 135 RHAEMIHIFNDANIT-ICEGQALDMELEQRKDVTIADYLDMISK-KTGRLISAALEAGGV 192 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + + L FGE +G FQ+ DD LD Sbjct: 193 AGNGTPEQIAALVTFGEKIGRAFQIQDDYLD 223 >gi|328945558|gb|EGG39709.1| geranyltranstransferase [Streptococcus sanguinis SK1087] Length = 291 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F + A +V AA+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ + +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + I KTG L+ + + ++ A Q+ +++LR GE LG+ FQ+ D Sbjct: 156 QGEGQAISLEDLKNIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|145220349|ref|YP_001131058.1| geranyltranstransferase [Prosthecochloris vibrioformis DSM 265] gi|145206513|gb|ABP37556.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Chlorobium phaeovibrioides DSM 265] Length = 335 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 20/199 (10%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + RY L G GK+IR FL + + + ++V A+E +H ++L+HDD+ MD Sbjct: 40 LYAPARYILEGKGKRIRPFLTLLASEAVSGSSDNTMKVALAVEVLHNFTLMHDDI--MDE 97 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGL 156 +R +PTVH ++D+ AI++G+ ++ Y++E+ Q + + +L+ L H NI + Sbjct: 98 ADLRHNRPTVHRKWDDNVAILSGDMMIAYSYEL----ALQAESHRHCELIHILNHANITI 153 Query: 157 QGMLGGQMLDIQDEFIDETQVF------MIQKMKTGALMCFACESGAIMAHASQNEKERL 210 GQ LD+ E D+T MI K KTG L+ A E+G + A A++ + L Sbjct: 154 ---CEGQALDM--ELEDKTDATIADYLDMISK-KTGRLISAALEAGGVAADATKEQLMSL 207 Query: 211 RCFGENLGIIFQLADDLLD 229 FGE +G FQ+ DD LD Sbjct: 208 VTFGEKIGRAFQIQDDYLD 226 >gi|332884305|gb|EGK04573.1| hypothetical protein HMPREF9456_00900 [Dysgonomonas mossii DSM 22836] Length = 325 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 12/199 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK++R L +L+ + + + IE H ++L+HDDL MD Sbjct: 30 LFEPISYILSLGGKRVRPALSLMSYNLYKEDVERVIPIALGIEIFHNFTLLHDDL--MDR 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG PTVHI++++ TA+++G+ +L A++ I+ +Q + + T Sbjct: 88 ADMRRGNPTVHIKWNDNTAVLSGDAMLIEAYKEIAKIDSQYLKPVLDLFSTTATE----- 142 Query: 158 GMLGGQMLDIQ-DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ D++ ++ +D T + + ++KT L+ + + GAI+A AS + E L +G Sbjct: 143 -ICCGQQYDMEFEQRMDVTIAEYLEMIRLKTAVLLACSLKEGAIVAGASAEDAENLYNYG 201 Query: 215 ENLGIIFQLADDLLDCEED 233 ++G+ FQL DDLLD D Sbjct: 202 IHVGLGFQLMDDLLDVYGD 220 >gi|295706420|ref|YP_003599495.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium DSM 319] gi|294804079|gb|ADF41145.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium DSM 319] Length = 321 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 24/216 (11%) Query: 32 QTQHNDRLL---SAIRYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYS 86 QT H D L +++ GGK+IR V A +N++ + V A+E IH S Sbjct: 23 QTVHTDETLITDASLHLLQAGGKRIRPVFVLLAAKFGHYNIDQIK--HVAVALELIHMAS 80 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+HDD+ +D+ RRGKPT+ ++D A+ G+ + A E++S K I S Sbjct: 81 LVHDDV--IDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEVMSEVKDVEAHKILSNT 138 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHAS 203 M+ LT G++ I+D++ +V++ + K KT L+ +C+ GAI A A Sbjct: 139 MVELTL---------GEIEQIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLGAIAAGAP 189 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 ++ +RL FG +G+ FQ+ DD+LD EE L K Sbjct: 190 EDIHKRLFWFGYYVGMSFQITDDILDFISSEEQLGK 225 >gi|332363439|gb|EGJ41222.1| geranyltranstransferase [Streptococcus sanguinis SK355] Length = 291 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F + A +V AA+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLELIQAFGLELTEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ + +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + I KTG L+ + + ++ A Q+ +++LR GE LG+ FQ+ D Sbjct: 156 QGEGQAISLEDLKNIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|315223294|ref|ZP_07865155.1| putative geranyltranstransferase [Streptococcus anginosus F0211] gi|315187726|gb|EFU21480.1| putative geranyltranstransferase [Streptococcus anginosus F0211] Length = 300 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 119/205 (58%), Gaps = 9/205 (4%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96 L+ AI Y++ GGK+IR L+ E + A +V AA+E IH SLIHDDLP+MD Sbjct: 27 LIEAILYSVNAGGKRIRPLLLLELLEGLGMELTEAHFQVAAALEMIHTGSLIHDDLPAMD 86 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + RRG+ H ++ E AI+AG+ L ++ +I+ + L I+ L+ L+ G Sbjct: 87 DDDYRRGRLPSHKKFGEAMAILAGDSLFLDSYALIA--EAALPSQIKVNLIAELSLAAGT 144 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM+GGQ+LD+Q E D + ++ I KTG L+ + + ++A ++++E+L+ G Sbjct: 145 FGMVGGQVLDMQGEGKDISLAELQTIHANKTGKLLTYPFIAAGLIAEVGESQQEKLKAIG 204 Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236 + LG+ FQ+ DD+LD EDL K Sbjct: 205 QLLGLAFQVRDDILDITANFEDLGK 229 >gi|260061041|ref|YP_003194121.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501] gi|88785173|gb|EAR16342.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501] Length = 325 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 103/196 (52%), Gaps = 12/196 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y + LGGK++R LV A LF AL AA+E H +SL+HDD+ MD Sbjct: 28 LYEPIGYIMDLGGKRMRPVLVLLSAELFGAPAENALPAAAAVEIFHNFSLVHDDI--MDA 85 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+PTVH ++D TAI++G+ +L A++ + +L Q + L L+ Sbjct: 86 APLRRGRPTVHRKWDPNTAILSGDAMLIRAYQQLDGYPPEL-----FQPLTRLFSRTALE 140 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ D+ E D+ + +M KT L+ A + GAI+ A E+E + FG Sbjct: 141 -VCEGQQYDMDFESRDDVGIPEYLRMIEFKTAVLLGCALQMGAIIGGAEVAEQEAVYDFG 199 Query: 215 ENLGIIFQLADDLLDC 230 LG+ FQL DD LD Sbjct: 200 IRLGLAFQLQDDYLDV 215 >gi|327458743|gb|EGF05091.1| geranyltranstransferase [Streptococcus sanguinis SK1057] Length = 291 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F + A +V AA+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ + +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + I KTG L+ + + ++ A Q+ +++LR GE LG+ FQ+ D Sbjct: 156 QGEGQAISLEDLKNIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|325955638|ref|YP_004239298.1| polyprenyl synthetase [Weeksella virosa DSM 16922] gi|323438256|gb|ADX68720.1| Polyprenyl synthetase [Weeksella virosa DSM 16922] Length = 323 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 106/197 (53%), Gaps = 14/197 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L +GGK+IR +V +FN A++ A+E H ++L+HDD+ MD+ Sbjct: 27 LYEPIEYILGIGGKRIRPLIVLMGNQMFNGLIEDAVKPAIAMEYFHNFTLMHDDI--MDS 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRGK VHI+Y +AI++G+ +L A+E++ P K+ IR L + + Sbjct: 85 APLRRGKEAVHIKYGINSAILSGDTMLIRAYELLEDLPNDVFKEAIR------LFNKTAI 138 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTG--ALMCFAC-ESGAIMAHASQNEKERLRCF 213 + + GQ D+ E E KM G A++ AC + GA++A A + E +RL Sbjct: 139 E-LCEGQQYDVNYETQKEISFEDYYKMIKGKTAVLVGACLKLGALIAGAPKEEADRLYEI 197 Query: 214 GENLGIIFQLADDLLDC 230 G NLGI +QL DD LD Sbjct: 198 GLNLGIAYQLKDDYLDV 214 >gi|332291452|ref|YP_004430061.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5] gi|332169538|gb|AEE18793.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 324 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 107/206 (51%), Gaps = 12/206 (5%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 H + L I Y L LGGK++R L LF +H AL AIE H +SL Sbjct: 17 KHTLEKEPKNLYDPINYILGLGGKRLRPVLTLMACELFEKDHAIALDAALAIEIFHNFSL 76 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ MD+ +RRGK TVH ++D T I++G+ +L A+++ + + D + + Sbjct: 77 VHDDI--MDDAPLRRGKETVHEKWDINTGILSGDAMLIRAYQLFENYEG---DTFKE--L 129 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204 L ++ + GQ D+ E D+ + KM KT L+ A + GAI+A AS+ Sbjct: 130 AKLFSKTAIE-VCEGQQYDVDFETRDDVTIPEYMKMIEYKTAVLVGAALKMGAIVAGASK 188 Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230 +E + +G +LG+ FQL DD LD Sbjct: 189 TCQEAIYNYGRDLGLAFQLQDDYLDA 214 >gi|325680723|ref|ZP_08160261.1| polyprenyl synthetase [Ruminococcus albus 8] gi|324107503|gb|EGC01781.1| polyprenyl synthetase [Ruminococcus albus 8] Length = 297 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 112/203 (55%), Gaps = 19/203 (9%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+ Y+L GGK++R L+ E + L L++ ++E IH YSLIHDDLP MD Sbjct: 34 VLEAMEYSLTAGGKRLRPMLMLEFYRMCGGEDLDKMLKLACSVELIHTYSLIHDDLPCMD 93 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTHNI 154 + RRGKP+ H + E A++AG+ L T AFE+IS + + +ML L+ I Sbjct: 94 DDDYRRGKPSCHKAFPENIALLAGDALNTLAFEVISECAMEGTISADKAVMLISVLSKAI 153 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+GGQ++D+Q +E I + +Q KTGAL+ AC G I A RL Sbjct: 154 GTDGMIGGQVIDLQTENEEISIETLNTLQSCKTGALIEAACVMGVIAAG-------RLDL 206 Query: 213 ------FGENLGIIFQLADDLLD 229 + + +G FQ+ DD+LD Sbjct: 207 IPAAADYAQAMGRAFQIVDDILD 229 >gi|254427009|ref|ZP_05040716.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881] gi|196193178|gb|EDX88137.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881] Length = 307 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/232 (37%), Positives = 129/232 (55%), Gaps = 22/232 (9%) Query: 8 KLQENSK-RIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64 +L E +K R++ LD L Q+A+ RL A+RYA L GGK+IR LV A L Sbjct: 19 QLTETAKARLEQALDHYLPAQSAA-------SRLSQAMRYAALSGGKRIRPLLVYGAAQL 71 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A A+E IH YSL+HDDLP+MD+ +RRG+ T H +DE TAI+AG+ L Sbjct: 72 AGASAAQADVPAVAVELIHAYSLVHDDLPAMDDDDLRRGQATCHKAFDEATAILAGDTLH 131 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183 T AFE+++ + + R L+ L G+ GM GQM D+ + +T V +++M Sbjct: 132 TRAFELLAC-HGDYRSDSRIALIQHLCQAAGVDGMAAGQMQDMLAQGQQQT-VAALEEMH 189 Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLD 229 KTG L+ + + G A++N+ L FG+ +G+ FQ+ DD+LD Sbjct: 190 YLKTGRLITASLQLGYF---AAENDDPALLSNLTDFGDAIGLAFQIQDDILD 238 >gi|333029215|ref|ZP_08457276.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011] gi|332739812|gb|EGJ70294.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011] Length = 324 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 17/204 (8%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L +GGK+IR L+ L+ + L AIE H ++L+HDDL MD Sbjct: 27 LYEPIHYVLSIGGKRIRPILMLLAYQLYKDDLEKTLPAACAIEVYHNFTLLHDDL--MDK 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156 +RR KPTVH ++ TAI++G+ +L ++ +++ +P+ L +L+ + + L Sbjct: 85 SDLRRNKPTVHNVWNANTAILSGDAMLILSYHLLAKAPQENL------SAVLNEFNKVTL 138 Query: 157 QGMLGGQMLDIQDEFID----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 + + GQ DI+ E + E + MI ++KT L+ + + GAI+A AS + L Sbjct: 139 E-ICEGQQYDIEFETKNSVKAEDYLDMI-RLKTAVLLASSIKMGAIIAGASDEDTNLLYD 196 Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236 FG N+G+ FQL DD LD D PK Sbjct: 197 FGLNVGLAFQLQDDYLDVYGD-PK 219 >gi|145588381|ref|YP_001154978.1| farnesyltranstransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046787|gb|ABP33414.1| Farnesyltranstransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 334 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 101/183 (55%), Gaps = 10/183 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R L+ A +A L + A +E IH +L+HDD+ +D +RRG+ T Sbjct: 50 GGKRVRPALLMLVAKALANGKESAHTLEMAAVVEFIHTATLLHDDV--VDESTLRRGRET 107 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + + +++ G+ L + AF+++ +P +++R +LS N +G + Q+L+ Sbjct: 108 ANAAFGNAASVLVGDFLYSRAFQMMVAP-----NDLRVMQILSDATNTIAEGEVL-QLLN 161 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + D +DE + + KT L + E GAI+A A+ +++E+ FG ++G FQL DD Sbjct: 162 MNDPEVDEASYLQVIRYKTAKLFEASTELGAILASATDSQREQAAAFGRHIGTAFQLMDD 221 Query: 227 LLD 229 LLD Sbjct: 222 LLD 224 >gi|315229911|ref|YP_004070347.1| dimethylallyltransferase [Thermococcus barophilus MP] gi|315182939|gb|ADT83124.1| dimethylallyltransferase [Thermococcus barophilus MP] Length = 342 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 13/197 (6%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y L GGK++R F+V A + AL AAIE +H Y+LIHDD+ MD RRG+ Sbjct: 41 YPLAGGKRVRPFVVLTAAEAVGGDWRKALYPAAAIEILHTYTLIHDDIMDMDE--TRRGR 98 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--MLGG 162 TVH + AI+AG+ + + F+ + K + ++ ++ + I G + G Sbjct: 99 ATVHKVWGINMAILAGDLMYSVVFDAAT------KAPVSAEKIVEIVRAIARAGIEICEG 152 Query: 163 QMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 Q LD++ E D + KM KT AL + + G I+ +Q + L +G N+G+ Sbjct: 153 QALDLEFETRDTVTIEEYLKMIDGKTAALFDASAKIGGIIGTDNQEYIQALSKYGRNVGM 212 Query: 220 IFQLADDLLDCEEDLPK 236 FQ+ DD+LD D K Sbjct: 213 AFQIWDDVLDLIADEKK 229 >gi|15922378|ref|NP_378047.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus tokodaii str. 7] gi|15623167|dbj|BAB67156.1| 329aa long hypothetical geranylgeranyl pyrophosphate synthetase [Sulfolobus tokodaii str. 7] Length = 329 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 7/183 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A L + A GA++E +H ++LIHDD+ MD RRG PTVH Sbjct: 40 GGKRLRPLILVSSADLLGGDLNRAYLAGASVEVLHTFTLIHDDI--MDEDTTRRGMPTVH 97 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +++ AI+AG+ L AFEI++ + N ++ T I + + GQ LD+Q Sbjct: 98 VKWGIPMAILAGDLLHAKAFEILNEAFRGMSSNKITRAFEIFTKAIII--ISEGQALDMQ 155 Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + E + + K KT L + G ++A ++ E + L +G NLGI FQ+ D Sbjct: 156 FEDKVTVSEEEYLDMIKRKTAMLFSSSAALGGLIATDNEKEIQALADYGLNLGISFQIVD 215 Query: 226 DLL 228 D+L Sbjct: 216 DIL 218 >gi|254475222|ref|ZP_05088608.1| decaprenyl diphosphate synthase [Ruegeria sp. R11] gi|214029465|gb|EEB70300.1| decaprenyl diphosphate synthase [Ruegeria sp. R11] Length = 406 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 16/230 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + L E ++T++ + M ++H R+ + + GGK++R L A Sbjct: 87 LAATLSEEMAAVNTLIR-------TRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 139 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L Sbjct: 140 LCGYSGDNHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 197 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 +F+++ + +I + ++ LQ M D DE + + Sbjct: 198 FARSFQLMVETGSLRVLDILANASATIAEGEVLQ------MTAASDLATDEDIYLQVVRG 251 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT AL A ++G ++A AS+ E + L +G+ LGI FQ+ADDLLD + D Sbjct: 252 KTAALFSAATQAGGVIAEASEAEVDALYAYGDALGIAFQIADDLLDYQGD 301 >gi|167043397|gb|ABZ08099.1| putative Polyprenyl synthetase [uncultured marine microorganism HF4000_APKG1C9] Length = 575 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 22/195 (11%) Query: 49 GGKKIRSF---LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R+ LV E + H T +GA+IE IH ++L+HDD+ +D IRRG Sbjct: 290 GGKRLRAIIPRLVGEAVGEAHDGHYT---LGASIEIIHNFTLVHDDI--IDQDPIRRGLD 344 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIG--LQGMLGG 162 VH+ YD+ TAI AG+ +L FEI++ SP+ I + + L IG ++ + G Sbjct: 345 AVHVAYDDATAINAGDAMLAVGFEILAESPE------IDADKLAFLVSTIGEMVRKVAEG 398 Query: 163 QMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 Q DI+ E +E + MI KT A+ +GAI+A AS + + +G NLG Sbjct: 399 QQDDIEFEQRNTVTEEDYIAMITG-KTSAMFETCATTGAILAGASDEIVDNMAIWGLNLG 457 Query: 219 IIFQLADDLLDCEED 233 + FQL DDL+D D Sbjct: 458 LCFQLMDDLIDITGD 472 >gi|167647338|ref|YP_001685001.1| polyprenyl synthetase [Caulobacter sp. K31] gi|167349768|gb|ABZ72503.1| Polyprenyl synthetase [Caulobacter sp. K31] Length = 322 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L ++ L++ AA+E IH +L+HDD+ +D +RRGK H Sbjct: 41 GGKRLRPLLTVATARLAGSDNAACLKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ L AFE++ + +R+ +L+ + +G + Q+ Sbjct: 99 LIWGAAQSVLVGDFLFARAFELMVETSS-----MRALEILAKASRVIAEGEVL-QLTRSH 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + I KT L A E+G + A S ++ E LR +G NLG+ FQLADD L Sbjct: 153 DLNLSQALYLEIIAAKTAELFAAASEAGGVSAGVSADKSEALRAYGMNLGLAFQLADDAL 212 Query: 229 D 229 D Sbjct: 213 D 213 >gi|327461660|gb|EGF07991.1| geranyltranstransferase [Streptococcus sanguinis SK1] gi|327489513|gb|EGF21306.1| geranyltranstransferase [Streptococcus sanguinis SK1058] Length = 291 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F + A +V +A+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLELIQAFGLELAEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ + +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + I KTG L+ + + ++ A Q+ +++LR GE LG+ FQ+ D Sbjct: 156 QGEGQAISLGDLKTIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|67008257|emb|CAJ00342.1| putative geranylgerannylpyrophosphate synthase [Andrographis paniculata] Length = 141 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/141 (37%), Positives = 87/141 (61%), Gaps = 6/141 (4%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRGKPT H Y E A++AG+ LL +AFE +++ + N+ + L+ IG +G+ Sbjct: 1 LRRGKPTNHKVYGEDVAVLAGDALLAFAFEHLATATEDVPTNMVVSAIGELSRCIGAEGL 60 Query: 160 LGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 + GQ++DI E I E + +++ + KT AL+ + GAI+ A+++E ERLR F Sbjct: 61 VAGQVVDICSEGISEVGLELLEFIHLHKTAALLEGSVVLGAILGGATESEVERLRKFARC 120 Query: 217 LGIIFQLADDLLD---CEEDL 234 +G++FQ+ DD+LD C E+L Sbjct: 121 IGLLFQVVDDILDVTKCSEEL 141 >gi|121998764|ref|YP_001003551.1| polyprenyl synthetase [Halorhodospira halophila SL1] gi|121590169|gb|ABM62749.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1] Length = 307 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 78/242 (32%), Positives = 126/242 (52%), Gaps = 21/242 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 + LP L+E ++R L+ A H + A+RYA+LGG K++R LV Sbjct: 13 LEAALP-PLRERAERA--------LEAALPAADAHPTGIHEAMRYAVLGGGKRMRPILVY 63 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + A+E IH YSL+HDDLP+MD+ +RRG+PT H YDE TAI+ Sbjct: 64 ATGQALDHTGRALDAPACAVEMIHAYSLVHDDLPAMDDDDLRRGQPTCHRAYDEPTAILV 123 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTHNIGLQGMLGGQMLDIQ--DEFIDET 175 G+ L AFE+++ + + ++ + +L G GM+GGQ +D+ +D Sbjct: 124 GDALQARAFELLADGEREGAPAPAARAGMVHALARAAGSGGMVGGQAIDLAAVGRQLDAA 183 Query: 176 QVFMIQKMKTGALMCFACESGAIMA----HASQNEKERLRCFGENLGIIFQLADDLLDCE 231 ++ + KTGAL+ + + GA+ + A+ N +R + + +G+ FQ+ DD+LD E Sbjct: 184 ELEDMHIHKTGALIRASVQLGALASGPTCAATLNALDR---YAKCVGLAFQIHDDVLDVE 240 Query: 232 ED 233 D Sbjct: 241 GD 242 >gi|62959181|gb|AAY23698.1| farnesyl diphosphate synthase [Halomonas sp. JL-104] gi|62959191|gb|AAY23703.1| farnesyl diphosphate synthase [Paracoccus sp. JL-65] Length = 143 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 85/135 (62%), Gaps = 6/135 (4%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG PT H Y E AI++G+ LLT +FE+++ SP D + +++ L+ G +G Sbjct: 12 LRRGLPTNHKVYGEAVAILSGDALLTKSFELVADSP---FDDRSKVKIISMLSKAAGAEG 68 Query: 159 MLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 M+GGQ+ DI+ E + + Q+ + K KTG L+ FA +G +++ ++E +LR F E+ Sbjct: 69 MVGGQVADIEGESMALSLEQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLRLFAEH 128 Query: 217 LGIIFQLADDLLDCE 231 +G+ FQ+ DD+LD E Sbjct: 129 IGLAFQIRDDILDVE 143 >gi|62959185|gb|AAY23700.1| farnesyl diphosphate synthase [Bacillus sp. JL-26] Length = 143 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 85/135 (62%), Gaps = 6/135 (4%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG PT H Y E AI++G+ LLT +FE+++ SP D + +++ L+ G +G Sbjct: 12 LRRGLPTNHKVYGEAVAILSGDALLTKSFELVADSP---FDDRSKVKIISMLSKAAGAEG 68 Query: 159 MLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 M+GGQ+ DI+ E + + Q+ + K KTG L+ FA +G +++ ++E +LR F E+ Sbjct: 69 MVGGQVADIEGESMALSLEQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLRLFAEH 128 Query: 217 LGIIFQLADDLLDCE 231 +G+ FQ+ DD+LD E Sbjct: 129 IGLAFQIRDDILDVE 143 >gi|62959195|gb|AAY23705.1| farnesyl diphosphate synthase [Micrococcus sp. JL-76] Length = 143 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 85/135 (62%), Gaps = 6/135 (4%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG PT H Y E AI++G+ LLT +FE+++ SP D + +++ L+ G +G Sbjct: 12 LRRGLPTNHKVYGEAVAILSGDALLTKSFELVADSP---FDDRSKVKIISMLSKAAGAEG 68 Query: 159 MLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 M+GGQ+ DI+ E + + Q+ + K KTG L+ FA +G +++ ++E +LR F E+ Sbjct: 69 MVGGQVADIEGESMALSLEQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLRLFAEH 128 Query: 217 LGIIFQLADDLLDCE 231 +G+ FQ+ DD+LD E Sbjct: 129 IGLAFQIRDDILDVE 143 >gi|327473380|gb|EGF18800.1| geranyltranstransferase [Streptococcus sanguinis SK408] Length = 291 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F + A +V +A+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLELIQAFGLELAEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ + +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + I KTG L+ + + ++ A Q+ +++LR GE LG+ FQ+ D Sbjct: 156 QGEGQAISLGDLKTIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|268608471|ref|ZP_06142198.1| Polyprenyl synthetase [Ruminococcus flavefaciens FD-1] Length = 297 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 123/222 (55%), Gaps = 6/222 (2%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 S+ I + ++L A +T+ L+ A+ Y+L GGK+IR LV + + Sbjct: 9 SEYISLVEENLRKYNAHSPETEAQKDLIEAMNYSLEAGGKRIRPVLVYAFCNALGGDTGN 68 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A AAIE IH +SLIHDDLP+MD+ RRG+ + H + E AI+AG+ L F +I Sbjct: 69 AAAPAAAIEMIHTFSLIHDDLPAMDDDDYRRGRLSCHKAHGEAMAILAGDALSVLPFGLI 128 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGAL 188 + + +L + +++ L +G GM+GGQ++D+Q+E +DE + + + KTG L Sbjct: 129 ADDE-KLSPEQKIRIISELARAVGKNGMIGGQVIDMQNEQRNDVDEANLRNMYRHKTGEL 187 Query: 189 MCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLD 229 + +C G I A + + E + +G LG+ FQ+ DD+LD Sbjct: 188 ISVSCIMGCICAGCTDSTIIEAAKEYGYKLGLAFQIIDDILD 229 >gi|62959219|gb|AAY23717.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP1768] Length = 145 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 86/145 (59%), Gaps = 2/145 (1%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+PSMDN +RRG+PT H Y + AI+AG+ +L+ AFE+++ + + +++ Sbjct: 1 HDDMPSMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRAFEMVAVRSANVPADRLLRVVG 60 Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L G G++GGQ++D++ E +D + I KT AL+ +GA++ A+ + Sbjct: 61 ELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLHKTAALLRACVVTGALIGGANDEQ 120 Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231 + +R + +G+ FQ+ DD+LD E Sbjct: 121 LQAMRTYANGIGLAFQIIDDILDVE 145 >gi|194335564|ref|YP_002017358.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|194308041|gb|ACF42741.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 337 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 106/196 (54%), Gaps = 14/196 (7%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + RY L G GK+IR FL + + AL V A+E +H ++LIHDD+ MD Sbjct: 42 LYAPARYILEGKGKRIRPFLTLLASEAVCGSSEHALNVALAVEILHNFTLIHDDI--MDQ 99 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +R G+PTVH +++ AI+ G+ ++ YA+E+ +++ R ++ + ++ + Sbjct: 100 AELRHGRPTVHRRWNTNAAILTGDMMIAYAYELALEAQSE-----RHGELVHILNDANIT 154 Query: 158 GMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ LDI+ E ++ + MI K KTG L+ A E+G + A+ + L F Sbjct: 155 -ICEGQALDIELEEKNDATIADYLDMIAK-KTGRLISAALEAGGVAGDATDEQLRSLVLF 212 Query: 214 GENLGIIFQLADDLLD 229 GE +G FQ+ DD LD Sbjct: 213 GEKIGQAFQIQDDYLD 228 >gi|289806419|ref|ZP_06537048.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 153 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 2/126 (1%) Query: 35 HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 N ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP Sbjct: 28 QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG PT HI++ E AI+AG+ L T AF IIS +P ++ D R ++ L + Sbjct: 88 AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELAN 147 Query: 153 NIGLQG 158 G+ G Sbjct: 148 ASGIAG 153 >gi|258647197|ref|ZP_05734666.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC 51259] gi|260853026|gb|EEX72895.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC 51259] Length = 321 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 18/202 (8%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I YAL GG K++R L SL++ + A+ ++E H ++L+HDDL MD Sbjct: 24 LYEPIAYALSGGGKRVRPHLTLLACSLYSDDPEKAIPAALSVETYHNHTLLHDDL--MDG 81 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNI 154 +RRG+PTV ++D TAI++G+ +L AF + P ++L+ L Sbjct: 82 ADLRRGRPTVFRKWDANTAILSGDTMLILAFNHLLEGGYPNA-------AELLQLLARTA 134 Query: 155 GLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + + GQ D+ Q + E + + ++KT L+ A + GA++A A ++ + L Sbjct: 135 --REVCEGQQYDMNFEQRNDVTEAEYIEMIRLKTSVLLACALKMGALVAGAPADQADLLY 192 Query: 212 CFGENLGIIFQLADDLLDCEED 233 FGE +G+ FQL DD LDC D Sbjct: 193 HFGEQIGLAFQLQDDYLDCYGD 214 >gi|224536141|ref|ZP_03676680.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus DSM 14838] gi|224522223|gb|EEF91328.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus DSM 14838] Length = 324 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 109/197 (55%), Gaps = 14/197 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L + + Y L +GGK+IR L+ +L+ + IE H Y+L+HDDL MD Sbjct: 27 LYAPVEYVLSMGGKRIRPVLMLLAYNLYKEDVTRIYAPATGIEVYHNYTLLHDDL--MDR 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 RRGK TVH +++ TAI++G+ +L A++ ++ P T LK+ + + SLT L Sbjct: 85 ADRRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAECPSTFLKEVMD---LFSLT---AL 138 Query: 157 QGMLGGQM---LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + G QM + +++ E + MI ++KT L+ + + GA + AS + +RL F Sbjct: 139 EICEGQQMDMEFEQRNDVTAEEYLEMI-RLKTAVLLAASLKIGARLGGASVEDADRLYDF 197 Query: 214 GENLGIIFQLADDLLDC 230 G ++G+ FQL DDLLD Sbjct: 198 GMHIGVAFQLKDDLLDV 214 >gi|329848574|ref|ZP_08263602.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] gi|328843637|gb|EGF93206.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] Length = 339 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L V + ++ AA+E IH +L+HDD+ +D+ +RRGK H Sbjct: 58 GGKRLRPLLCVAAARLCEVRNDNHHKLSAAVEFIHTATLLHDDV--VDSSSLRRGKVAAH 115 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + ++++ G+ L AFE++ + +I S+ +T LQ M + Q Sbjct: 116 LIWGAPSSVLVGDFLFARAFELMVETGSLRALDILSKASAVITQGEVLQLMKAFDLNLSQ 175 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 ++I+ I KT AL A ESGA+ A AS+++ L +G NLG+ FQ+ DD+L Sbjct: 176 ADYIE------IISSKTAALFSAASESGAVAAGASEDKITALYSYGLNLGLAFQIQDDVL 229 Query: 229 DCEED 233 D + D Sbjct: 230 DYQGD 234 >gi|149183310|ref|ZP_01861750.1| HepT [Bacillus sp. SG-1] gi|148848968|gb|EDL63178.1| HepT [Bacillus sp. SG-1] Length = 320 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 17/194 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + N + V A+E IH SL+HDD+ +D+ +RRGKPT+ Sbjct: 43 GGKRIRPVFVLLSAKFGDYNINSIKNVAVALELIHSASLVHDDV--IDDADLRRGKPTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Q+D TA+ G+ + + E ++ + I S ++ LT G++ I+ Sbjct: 101 SQWDNKTAMYTGDYIFARSLEYMTKIDNEDAHKILSNAIVELT---------VGEIEQIK 151 Query: 169 DEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ E + ++ + K KT L+ +C+ GAI A A ++L FG N+G+ FQ+ D Sbjct: 152 DKYRFEQDLKDYLRRIKRKTALLIAVSCQLGAIAAGAPPEIHKKLYRFGYNVGMSFQITD 211 Query: 226 DLLD---CEEDLPK 236 D+LD EE+L K Sbjct: 212 DILDFTASEEELGK 225 >gi|163745677|ref|ZP_02153037.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45] gi|161382495|gb|EDQ06904.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45] Length = 334 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 9/204 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A + + + A +E IH +L+H Sbjct: 34 MASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYGGPYHVHLAATVEFIHTATLLH 93 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L +F++++ P + I S + Sbjct: 94 DDV--VDESAQRRGRPTANLLWDNQSSVLVGDYLFARSFQLMTEPGSMPVMRILSNAAAT 151 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + Q+ DE + + KT AL A E G ++A AS ++ + Sbjct: 152 IAEGEVLQ------LTAAQNLATDEAVYLQVVRGKTAALFSAATEVGGVIAGASTDQVKA 205 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L +G+ LGI FQ+ DDLLD + D Sbjct: 206 LYDYGDALGIAFQIVDDLLDYQGD 229 >gi|302383413|ref|YP_003819236.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302194041|gb|ADL01613.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 346 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 61/186 (32%), Positives = 92/186 (49%), Gaps = 13/186 (6%) Query: 49 GGKKIRSFLVTECASLFNVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK++R L A + AL++ A++E IH +L+HDD+ +D RRG Sbjct: 60 GGKRLRPLLTIAAARSATADRPDADLTAALKLAASVEFIHTATLLHDDV--VDGSERRRG 117 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 K H+ + T+++ G+ L AFE++ D IR+ +L+ ++ QG + Q Sbjct: 118 KVAAHLIWGSATSVLVGDFLFARAFELMVE-----TDQIRALGILAQASSVIAQGEVL-Q 171 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + D +D+ I KT L A ESGA+ A LR +G NLG+ FQL Sbjct: 172 LTRAHDLNLDQETYLRIISAKTAELFAAAAESGAVGVGADPKTTSALRSYGLNLGLAFQL 231 Query: 224 ADDLLD 229 ADD LD Sbjct: 232 ADDALD 237 >gi|269792514|ref|YP_003317418.1| Geranyltranstransferase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100149|gb|ACZ19136.1| Geranyltranstransferase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 305 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 11/221 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76 + +++ L + S + RL SA+ Y+L GGK++R L A F + + + Sbjct: 19 SWVEEALERLCSSRPKRVPSRLWSAMVYSLTAGGKRLRPVLCLMAAEAFGLEGQRVMPLA 78 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A E IH SLIHDDLP MD+ +RRGKPT H+ + E A++AG+ LL AFE S+ + Sbjct: 79 LAFEMIHTASLIHDDLPCMDDDDLRRGKPTNHVVFGEAMALLAGDALLALAFE--SAIEG 136 Query: 137 QLKDNIRSQLM----LSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGAL 188 + ++ +L+ +SL G G+ GGQ +D+ E + + +V + + KTG L Sbjct: 137 LMANHFSGELISLAVMSLAKATGPSGICGGQSMDMGFEDMGQLGPDRRVMEVARSKTGVL 196 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + E GAIMA A ++ +R +G LG FQ+ADD+LD Sbjct: 197 IASSLEGGAIMAGADEDALSNVRGYGMALGKAFQVADDILD 237 >gi|88704338|ref|ZP_01102052.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71] gi|88701389|gb|EAQ98494.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71] Length = 320 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVT-ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV A+L +++ L +R A +E IH +L+HDD+ +D +RRG+PT Sbjct: 41 GGKRLRPVLVLLSSAALGSISELQ-IRFAAVVEFIHTATLLHDDV--VDVSELRRGRPTA 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + ++++ G+ L T AF+++ + L ++ ++M T+ I +L Q++ Sbjct: 98 NSAFGNASSVLVGDFLYTRAFQLMVT----LGNHDVLKMMADTTNTIAAGEVL--QLIRA 151 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E Q + + KT AL C+ A++A A L +G N+GI FQ+ DDL Sbjct: 152 GDSSTSEDQYYDVIDRKTAALFAAGCQGAALLAGADSGNVRDLNIYGRNVGIAFQIVDDL 211 Query: 228 LDCEED 233 LD + D Sbjct: 212 LDYQGD 217 >gi|320540162|ref|ZP_08039817.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str. Tucson] gi|320029828|gb|EFW11852.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str. Tucson] Length = 333 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 115/211 (54%), Gaps = 11/211 (5%) Query: 22 DLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAA 78 D++ A+ ++ H+D L++ + Y ++ GGK+IR + A N + V A Sbjct: 23 DMMAVNAAILEQLHSDVTLINQLCYYIISGGGKRIRPMIAVLAARALNYEGNKHVTVAAL 82 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T AF++++S K+ Sbjct: 83 IEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLKS-- 138 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 +R ++S N+ +G + Q++++ D I E + KT L A +S AI Sbjct: 139 ---LRVLALMSEAVNVIAEGEVL-QLMNVHDPDITEESYMQVIYSKTARLFEAAAQSSAI 194 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ A+Q E++ L+ +G LG FQL DDLLD Sbjct: 195 LSGANQAEEKALQDYGRYLGTAFQLIDDLLD 225 >gi|150026434|ref|YP_001297260.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86] gi|149772975|emb|CAL44459.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86] Length = 324 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 12/202 (5%) Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T+ L + I Y L LGGK++R L +F+V+ +L AIE H +SL+HDD Sbjct: 21 TKEPKNLYNPIDYILSLGGKRMRPILTLMATEVFDVDCKKSLAAATAIEIFHNFSLVHDD 80 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + MD+ +RRG TVH +++ T I++G+ +L A++ + ++ + + L Sbjct: 81 I--MDDAPLRRGNETVHEKWNINTGILSGDAMLILAYQHFEEYEPKIFRD-----LAKLF 133 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKE 208 L+ + GQ D+ E D+ + KM KT L+ A + GAI+A S Sbjct: 134 SKTALE-VCEGQQYDVDFETRDDVIIAEYLKMIEYKTAVLVGAAMKMGAIVAQTSTENAN 192 Query: 209 RLRCFGENLGIIFQLADDLLDC 230 + FG NLGI FQL DD LD Sbjct: 193 LIYDFGLNLGIAFQLQDDYLDA 214 >gi|307704839|ref|ZP_07641733.1| farnesyl diphosphate synthase [Streptococcus mitis SK597] gi|307621615|gb|EFO00658.1| farnesyl diphosphate synthase [Streptococcus mitis SK597] Length = 291 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 12/227 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K QE ++ L+D + Q L ++ Y++ GGK+IR FL+ Sbjct: 2 KKQEKLALVELALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLGVLEALQ 55 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V A +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 56 VAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 + +I+ + L I+ L+ +L+ G GM+ GQ+LD++ E ++ ++ I Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQYLSLEELQTIHAN 173 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L+ + ++ AI+A + + +L+ G +G+ FQ+ DD+LD Sbjct: 174 KTGKLLAYPFQAAAIIAELAPEIQAKLKTVGALIGLAFQVRDDVLDV 220 >gi|324990647|gb|EGC22583.1| geranyltranstransferase [Streptococcus sanguinis SK353] Length = 291 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F + A +V AA+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ + +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + I KTG L+ + + ++ A Q+ +++LR G+ LG+ FQ+ D Sbjct: 156 QGEGQAISLGDLKTIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGDLLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|297620258|ref|YP_003708395.1| putative geranyltranstransferase [Waddlia chondrophila WSU 86-1044] gi|297375559|gb|ADI37389.1| putative geranyltranstransferase [Waddlia chondrophila WSU 86-1044] Length = 315 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 18/210 (8%) Query: 42 AIRYAL-LGGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 A YAL GGK++R + +V + L+AL +IE H SL+ DD+PSMDN Sbjct: 60 ACAYALSTGGKRVRPSITLMVADALGGMGDVTLSAL----SIEYFHTASLVVDDMPSMDN 115 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD---------NIRSQLML 148 RR +P+VH ++ E A++ GL+ + +I+ L D ++R +L L Sbjct: 116 DDERRSQPSVHKKFGEAAALLVSYGLIGAGYGMIAENGRLLLDQNIFFADSVDLRCRLAL 175 Query: 149 -SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 + + N GL G GGQ LDI+ + + I MKT +L A +G + + + Sbjct: 176 ENASFNTGLNGATGGQFLDIRPPDLSTETLKKIIHMKTSSLFEVAFVNGWLFGGGALEKL 235 Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 ++++ + G+ FQ+ADDL D E+DL K Sbjct: 236 DQVKQAAAHFGLAFQIADDLGDMEQDLRNK 265 >gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii] gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii] Length = 328 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 7/197 (3%) Query: 38 RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 +L A+RYAL G+ + + + L + A+ A+E I + + DDLPS+DN Sbjct: 63 QLHEAMRYALSQGRLMCAIVCIAACELVGGSQDDAMPGACAVEMIKTSTCVQDDLPSIDN 122 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +R GKPTVH + TA+ AG LL FE +++ + + ++++ ++ +G Sbjct: 123 AELRDGKPTVHCAFGIPTALFAGTALLVLGFEHLAA---HYRGDTAARMVGEVSRAVGST 179 Query: 158 GMLGGQMLD--IQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G+L GQ +D IQ+ ++ + + KT AL+ + GAI AS + E LR + Sbjct: 180 GLLAGQAVDMGIQNAGRAVELETLEFVHLHKTSALLEASLVIGAIAGGASDQDIEALRAY 239 Query: 214 GENLGIIFQLADDLLDC 230 G G+++Q+ DD+ D Sbjct: 240 GRVTGLLYQIVDDIADA 256 >gi|171463010|ref|YP_001797123.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192548|gb|ACB43509.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 334 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 99/183 (54%), Gaps = 10/183 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R L+ A T L + A +E IH +L+HDD+ +D +RRG+ T Sbjct: 50 GGKRVRPALLMLVAKALANGKQTPHILEMSAVVEFIHTATLLHDDV--VDESTLRRGRKT 107 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + + +++ G+ L + AF+++ P +++R +LS N +G + Q+L+ Sbjct: 108 ANAAFGNAASVLVGDFLYSRAFQMMVDP-----NDLRVMQILSDATNTIAEGEVL-QLLN 161 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + D +DE + + KT L + E GAI+A+A+ ++E+ FG ++G FQL DD Sbjct: 162 MNDPEVDEESYLQVIRYKTAKLFEASTELGAILANATNAQREQAAAFGRHIGTAFQLMDD 221 Query: 227 LLD 229 LLD Sbjct: 222 LLD 224 >gi|229495533|ref|ZP_04389266.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406] gi|229317516|gb|EEN83416.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406] Length = 334 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 16/231 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65 + +Q+N I+T L L+ +H +TQ ++ L + + YA GG K++R LV A ++ Sbjct: 7 TTIQDNLSYIETELQTLV----AHCRTQISEPLYAPMAYAFEGGGKRVRPLLVLMVADMY 62 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + ++ A+E H ++L+HDD+ MD+ +RR +P+V Q+ AI+ G+ +L+ Sbjct: 63 GKDRADFIKAALALEIYHNFTLLHDDV--MDHSEMRRNRPSVPAQFGIAQAILTGDAMLS 120 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-- 183 A+++ L+ I N Q ++ GQ +D+ E + + ++M Sbjct: 121 LAYKLTQEYPLALQPAIMG------VFNRMSQDIMVGQQMDMDFETRSDVTLAEYERMIR 174 Query: 184 -KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT L+ A E GA +A ++ L G N G+ FQL DD LD D Sbjct: 175 KKTAVLLSAALEIGAYIADTGMRDRSYLIRAGINAGMAFQLRDDYLDVYGD 225 >gi|324995302|gb|EGC27214.1| geranyltranstransferase [Streptococcus sanguinis SK678] gi|332366064|gb|EGJ43820.1| geranyltranstransferase [Streptococcus sanguinis SK1059] Length = 291 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F + A +V +A+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLELIQAFGLELAEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ + +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + I KTG L+ + + ++A Q+ +++LR GE LG+ FQ+ D Sbjct: 156 QGEGQAISLEDLKTIHANKTGKLLTYPFVAAGLIAGVEQSVQDKLRRIGELLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|255262881|ref|ZP_05342223.1| geranylgeranyl pyrophosphate synthetase [Thalassiobium sp. R2A62] gi|255105216|gb|EET47890.1| geranylgeranyl pyrophosphate synthetase [Thalassiobium sp. R2A62] Length = 295 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 107/224 (47%), Gaps = 14/224 (6%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71 + RI+T + + A +L SA+ YA+ GG +IR ++ AS + Sbjct: 4 TARIETAIQSAI---AGGQTAPSPGKLASALHYAVTPGGARIRPTILLSVASACGDDMPK 60 Query: 72 -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A AA+E IHC SL+HDDLP D+ RRGKP VH + E A++ G+ L+ AF + Sbjct: 61 LADAAAAALELIHCASLVHDDLPCFDDADTRRGKPAVHRAFGEPLAVLTGDSLIVMAFTV 120 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++ L +LM L G+ G+ GQ + +D+ + + KTGAL Sbjct: 121 LTQ-SAHLHPTRAIELMKVLAERTGMPNGICAGQGWESEDQI----DLSAYHRAKTGALF 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GAI A + L G +G FQ+ADDL D D Sbjct: 176 IAATQMGAIAAGQDGAPWDEL---GARIGEAFQVADDLRDALYD 216 >gi|240139478|ref|YP_002963953.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens AM1] gi|240009450|gb|ACS40676.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens AM1] Length = 288 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 112/219 (51%), Gaps = 14/219 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECA-SLFNVNHL 70 +RI+T+LD+ + SH + LL+ AIRYA+ GG +IR L A + + + Sbjct: 5 RRIETVLDNAV----SHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPA 60 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T+ AAIE +HC SL+HDDLP D+ +RR KP+VH + A++ G+ L+ AFE Sbjct: 61 TSEAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAFET 120 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 ++ T+ + + L G++ GQ + + ++D + Q+ KTGAL Sbjct: 121 LARGVTRSPTRLAGLVGLIARAAGSPAGIVAGQAWE-SEPYVDLVE---YQQAKTGALF- 175 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A A+ R GE LG +Q+ADDL D Sbjct: 176 --AAATVAGAAAAGAPPLPWRLLGECLGAAYQVADDLRD 212 >gi|89052978|ref|YP_508429.1| trans-hexaprenyltranstransferase [Jannaschia sp. CCS1] gi|88862527|gb|ABD53404.1| Trans-hexaprenyltranstransferase [Jannaschia sp. CCS1] Length = 335 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 9/203 (4%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + M ++H R+ + + GGK+IR L CA L + +++ A +E IH +L Sbjct: 31 ARMASKHAPRIPEVTAHLVEAGGKRIRPMLTLACARLCGYSGDDHVKLAATVEFIHTATL 90 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D RRG+PT ++ +D ++++ G+ L AF+++ P +I S Sbjct: 91 LHDDV--VDESEQRRGRPTANLLWDNQSSVLVGDYLFARAFQLMVEPGNLRVLDILSNAA 148 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 ++ LQ + + E +ET + +I + KT AL ACE G ++A Sbjct: 149 ATIAEGEVLQLTVASNI-----ETPEETYLQVI-RGKTAALFEAACEVGGVIAGRDTFII 202 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 + L +G+ LG+ FQ+ADDLLD Sbjct: 203 QALATYGDGLGVAFQMADDLLDW 225 >gi|163760432|ref|ZP_02167514.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43] gi|162282383|gb|EDQ32672.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43] Length = 289 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 114/220 (51%), Gaps = 16/220 (7%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLL-SAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71 KRID L+ Q + N ++ A+RY++ GG +IR L A + Sbjct: 5 KRIDRNLE----QAITFATAGGNPSIICDALRYSVFPGGARIRPRLCLAVALAEGDEAPS 60 Query: 72 ALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A A AIE +HC SL+HDDLP D+ RRGKP+VH + E TA++AG+ L+ AFE Sbjct: 61 ASNAAATAIELLHCASLVHDDLPCFDDAATRRGKPSVHTAFGETTAVLAGDALIVLAFET 120 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 I+ D I + L+ + +G+ G++ GQ + ++ ID + + + KT +L Sbjct: 121 IARECLATPDRI-APLIGVIGRAVGMPHGIIAGQAWE-SEKSID---LKVYHRAKTSSLF 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + +GAI A A RL GE LG FQ+ADDL D Sbjct: 176 IGSTTAGAIAAGADPQNWYRL---GEALGDAFQVADDLRD 212 >gi|224080676|ref|XP_002306207.1| predicted protein [Populus trichocarpa] gi|222849171|gb|EEE86718.1| predicted protein [Populus trichocarpa] Length = 258 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 7/180 (3%) Query: 34 QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 Q+ D++ A+RY++L G K+ + LF N L A A+E +H SLIHDD Sbjct: 76 QYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRLAAFPTACALEMVHAASLIHDD 135 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQLMLS 149 LP MD+ RRG+P+ H Y AI+AG+ L F I+S + L R +++ Sbjct: 136 LPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGFSHIVSQTPSDLVPEPRLLRVIAE 195 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + +G +GM GQ LD++ V +Q+ K G + + G ++A A+ +E R Sbjct: 196 IARAVGSRGMAAGQFLDLEG---GPNAVEFVQEKKYGEMGECSAVCGGLLAGATDDEIRR 252 >gi|51473666|ref|YP_067423.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington] gi|51459978|gb|AAU03941.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington] Length = 327 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 122/227 (53%), Gaps = 20/227 (8%) Query: 8 KLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 K+Q++ K T L+DL+ L++ + + + LL A GGK+IR L A + Sbjct: 6 KIQQDLKEEVTQLNDLIISCLKSDTELIEKVGKYLLEA------GGKRIRPLLTIITAKM 59 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F+ +++ +A+E IH +L+HDD+ +D+ +RR KPTV++ + T+I+ G+ L Sbjct: 60 FDYKGDNHIKLASAVEFIHAATLLHDDV--VDDSTLRRFKPTVNVIWGSKTSILVGDFLF 117 Query: 125 TYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 + +F+++ + N+ R+ +++S + L + +++ I DE Q I K Sbjct: 118 SQSFKLMIASGCIKAMNVLARASVIISEGEVVQLVKLNERRIITI-----DEYQ--QIVK 170 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L ACE GAI+A E ++ FG LG IFQ+ DDLLD Sbjct: 171 SKTAELFGAACEVGAIIAEQVDRVSEDVQDFGMLLGTIFQVIDDLLD 217 >gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba Length = 268 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 22/195 (11%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ A+RY+LL GGK++R L L A+ A+E IH SLIHDD+ Sbjct: 39 KIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPAACAVEMIHTMSLIHDDV---- 94 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIG 155 Y E A++AG+ LL++AFE ++S + R + + L IG Sbjct: 95 --------------YGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIG 140 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 +G++ GQ++DI + ++ + I KT AL+ + G I+ S E ERLR F Sbjct: 141 TEGLVAGQVVDISNVGLEHLK--FIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFAR 198 Query: 216 NLGIIFQLADDLLDC 230 +G++FQ+ DD+LD Sbjct: 199 CIGLLFQVVDDILDV 213 >gi|182415631|ref|YP_001820697.1| polyprenyl synthetase [Opitutus terrae PB90-1] gi|177842845|gb|ACB77097.1| Polyprenyl synthetase [Opitutus terrae PB90-1] Length = 325 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 84/237 (35%), Positives = 120/237 (50%), Gaps = 48/237 (20%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASL-FNVNH--------------------LTALRV 75 RL A+RY+L GGK++R L+ A L H +TAL + Sbjct: 31 RLHEAMRYSLQAGGKRLRPVLLLASAELCGGSGHSPSLQQSATPEPPAGRRGDLVTALAL 90 Query: 76 GAA--IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 AA IEC+H YSLIHDDLP MD+ +RRG+PT H +DE TA++AG+ LLT+AF + Sbjct: 91 PAAVAIECLHTYSLIHDDLPCMDDDDLRRGRPTAHKAFDEATALLAGDALLTHAFAL--- 147 Query: 134 PKTQLKDNIRSQLMLS------LTHNIGLQGMLGGQMLD-IQDEFIDET--QVFMIQKMK 184 L +N SQ L+ L G + ++GGQM D + ++ D T ++ I K Sbjct: 148 ----LAENYASQPALAMALIRELADAAGSRRLIGGQMEDLLAEKKADATAEELEFIHLNK 203 Query: 185 TGALMCFACESGAIMAHASQN--------EKERLRCFGENLGIIFQLADDLLDCEED 233 T A++ + G + +Q E LR G +LG+ FQ+ DD+LD D Sbjct: 204 TAAMIEASLVMGGWIGLHAQTAAPGALPPEITALRAAGRHLGLAFQIIDDVLDATAD 260 >gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group] gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica Group] gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica Group] gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group] gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group] gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group] Length = 366 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 115/205 (56%), Gaps = 16/205 (7%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RYALL GGK++R L ++ A+ AA+E +H SL+HDDLP MD+ Sbjct: 94 LHEAMRYALLAGGKRVRPALCLAACAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDD 153 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLS---L 150 +RRGKPT H+ Y E A++ G+ LL+ +F + S P D ++++ + L Sbjct: 154 DDLRRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGEL 213 Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQ 204 IG +G++ GQ++D+ E T+ ++++ KT AL+ + GAI+ S Sbjct: 214 ARCIGSEGLVAGQVVDL--EMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSD 271 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 + E LR + ++G++FQ+ DD+LD Sbjct: 272 EQIESLRMYARSIGLLFQVVDDILD 296 >gi|325694101|gb|EGD36019.1| geranyltranstransferase [Streptococcus sanguinis SK150] Length = 291 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 105/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ F + A +V AA+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLGLIQAFGLELTEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ + +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + I KTG L+ + + ++A Q+ +++LR GE LG+ FQ+ D Sbjct: 156 QGEGQVIRLEDLKTIHANKTGKLLTYPFVAAGLIAEVEQSVQDKLRRIGELLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|319892460|ref|YP_004149335.1| Heptaprenyl diphosphate synthase component II [Staphylococcus pseudintermedius HKU10-03] gi|317162156|gb|ADV05699.1| Heptaprenyl diphosphate synthase component II [Staphylococcus pseudintermedius HKU10-03] gi|323464437|gb|ADX76590.1| heptaprenyl diphosphate synthase component II [Staphylococcus pseudintermedius ED99] Length = 318 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 22/225 (9%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FNV 67 L + K+I+ L L+ S +Q+ D LLS+ GGK++R V + + N Sbjct: 6 LNQEIKKIENTLKQLIQSEDSTLQSA-ADHLLSS------GGKRVRPLFVILSSYVGENP 58 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A RV A+E IH +L+HDD+ +D RRGK T+ ++D+ TAI+ GN LL A Sbjct: 59 ANDAAYRVATALELIHMATLVHDDV--IDFSDKRRGKLTIEKKWDQPTAILTGNFLLARA 116 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMK 184 E +S ++D S++ +L+H I + G++ QD+F E T K Sbjct: 117 LEHLSY----IQD---SRIHQTLSHAII--EVCRGELFQFQDQFRAEQSITNYLRRINRK 167 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T LM A E GA+ +H ++R G ++G+ FQ+ DD+LD Sbjct: 168 TALLMQLATEVGAMSSHTDDPTIRKMRDIGHHIGMSFQIVDDVLD 212 >gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma] Length = 338 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 5/197 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L A+RY LL GGK++R + L + T + A E IH S++ DDLP MD Sbjct: 72 KLHEAMRYTLLSGGKRVRPIVCIAACELVGGHESTVMPTACAQEMIHSMSVMLDDLPCMD 131 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGK + H Y E ++A L A + + + + + + + G Sbjct: 132 NDDFRRGKLSNHRVYGEKITLLAVRSLQALAVDHVVTATRGVPPERLVRALTEMAILTGS 191 Query: 157 QGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 +G GQ+ D+ +D + Q+ I KTG L + SGAI+ AS+ E E+LR Sbjct: 192 KGAAAGQIADLCSSGEDFNVSIEQLEHIHMQKTGTLCEGSVVSGAIIGGASEEEIEKLRK 251 Query: 213 FGENLGIIFQLADDLLD 229 F + +G++FQ+ DD+LD Sbjct: 252 FSKCIGLMFQIVDDVLD 268 >gi|284040578|ref|YP_003390508.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74] gi|283819871|gb|ADB41709.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74] Length = 323 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 116/225 (51%), Gaps = 15/225 (6%) Query: 18 TILDDLLLQTASHMQT-QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 I D L Q +Q Q+ L + IRY + LGGK++R L A LF + A+R Sbjct: 4 AIFIDALQQELQSIQYGQNPPELYNPIRYIMSLGGKRMRPLLTLMGAYLFTDDWRKAVRP 63 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 +E H ++L+HDD+ MD +RRG+PTVH +++ AI++G+ +L A++++ + + Sbjct: 64 ALGVEVFHNFTLMHDDI--MDQAPLRRGQPTVHEKWNGNIAILSGDVMLVNAYQLMLNVE 121 Query: 136 TQLKDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191 +L ++L + + GQ +D+ E + E + + ++KT L+ + Sbjct: 122 A-------DKLAVALARFSRTAAEVCEGQQMDMNFETRWDVSEAEYIDMIRLKTSVLLGY 174 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + E G ++ A + L G N+G+ FQL DDLLD D K Sbjct: 175 SLELGGLIGGADEETNLHLYEGGMNIGVGFQLKDDLLDVYGDPAK 219 >gi|149923736|ref|ZP_01912130.1| geranylgeranyl pyrophosphate synthetase [Plesiocystis pacifica SIR-1] gi|149815420|gb|EDM74960.1| geranylgeranyl pyrophosphate synthetase [Plesiocystis pacifica SIR-1] Length = 262 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 18/160 (11%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS- 133 V AA+E +HC SL+HDDLP D+ +RRG+P+VH + E A++AG+GL+ A+E+I+ Sbjct: 19 VAAAMELMHCASLVHDDLPCFDDAPLRRGRPSVHAAFGEELAVLAGDGLIILAYEVIAET 78 Query: 134 --PKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 P + + IR S+ + + + Q + + +Q + KTGAL Sbjct: 79 NLPPSAVPKLIRCISRGVGAGGGLVAGQAWESERSVGLQ----------TYHQAKTGALF 128 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +GAI+A A Q + FG +LG +Q+ADDL D Sbjct: 129 EAGARAGAILAGAPQEPWAK---FGAHLGEAYQVADDLRD 165 >gi|254512243|ref|ZP_05124310.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium KLH11] gi|221535954|gb|EEE38942.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium KLH11] Length = 332 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 9/206 (4%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + M + H R+ + + GGK++R L A LF+ + +R+ A +E IH +L Sbjct: 30 TRMASDHAPRIPEVTAHLVEAGGKRLRPMLTLAAAQLFDYSGDHHIRLAATVEFIHTATL 89 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D RRG+PT ++ +D ++++ G+ L + +F+++ + +I + Sbjct: 90 LHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRVLDILANAS 147 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 ++ LQ M LD E + + KT AL A E G ++A AS + Sbjct: 148 ATIAEGEVLQ-MTAATDLDTS-----EAIYLQVVRGKTAALFSAATEVGGVIAGASDEQV 201 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L +G+ LGI FQ+ADDLLD + D Sbjct: 202 RALYDYGDALGIAFQIADDLLDYQGD 227 >gi|62959183|gb|AAY23699.1| farnesyl diphosphate synthase [Exiguobacterium sp. JL-24] Length = 144 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/136 (38%), Positives = 84/136 (61%), Gaps = 7/136 (5%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG PT H + E AI+AG+GLLT++F++++ + L D + +L+ L G +GM Sbjct: 12 LRRGNPTNHKVFGEAMAILAGDGLLTFSFQLLAEDE-HLPDEKKVELIALLARCAGPEGM 70 Query: 160 LGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 +GGQ+ DI+ E ++E Q ++ KTG L+ F+ +GAIM+ AS E L F Sbjct: 71 VGGQVADIEGENGELTVEELQSIHVR--KTGKLLMFSVMAGAIMSDASPGELASLEEFAY 128 Query: 216 NLGIIFQLADDLLDCE 231 ++G+ FQ+ DD+LD E Sbjct: 129 HVGLAFQIQDDILDVE 144 >gi|159046054|ref|YP_001534848.1| geranylgeranyl pyrophosphate synthetase [Dinoroseobacter shibae DFL 12] gi|157913814|gb|ABV95247.1| geranylgeranyl pyrophosphate synthetase [Dinoroseobacter shibae DFL 12] Length = 292 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 83/233 (35%), Positives = 116/233 (49%), Gaps = 25/233 (10%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLT 71 RI+T LD L+++ + +L SA+ YA+ GG +IR + A + LT Sbjct: 6 RIETALDIALIRSRAG---SCPPKLASALEYAVKPGGARIRPTICLNVARACGDDAPGLT 62 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 AAIE IHC SL+HDDLP+ DN +RRGKPTVH + E A++ G+ L+ AFE I Sbjct: 63 DAAC-AAIELIHCGSLVHDDLPAFDNADVRRGKPTVHKAWSEPLAVLTGDTLIIMAFEQI 121 Query: 132 SSPKTQLKDNIRSQ-LMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFM--IQKMKTGA 187 + D +R+ L L L G+ G+ GQ + E QV + + KTGA Sbjct: 122 A--LAARSDALRAATLTLELARYSGMPHGICAGQAWE------SEAQVDLSAYHRAKTGA 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 L + + A A+ + E G +G FQ+ADDL D EE L K Sbjct: 174 LFTA---ATRMGAAAAGADPEAWTELGARIGEAFQVADDLRDALYDEETLGKP 223 >gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group] Length = 366 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 115/205 (56%), Gaps = 16/205 (7%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RYALL GGK++R L ++ A+ AA+E +H SL+HDDLP MD+ Sbjct: 94 LHEAMRYALLAGGKRVRPALCLAACAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDD 153 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLS---L 150 +RRGKPT H+ Y E A++ G+ LL+ +F + S P D ++++ + L Sbjct: 154 DDLRRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGEL 213 Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQ 204 IG +G++ GQ++D+ E T+ ++++ KT AL+ + GAI+ S Sbjct: 214 ARCIGSEGLVAGQVVDL--EMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSD 271 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 + E LR + ++G++FQ+ DD+LD Sbjct: 272 EQIESLRMYARSIGLLFQVVDDILD 296 >gi|157825829|ref|YP_001493549.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford] gi|157799787|gb|ABV75041.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford] Length = 327 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 123/226 (54%), Gaps = 18/226 (7%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65 K+Q++ K T L+DL++ + ++ L+ + LL GGK+IR L A +F Sbjct: 6 KIQQDLKDEVTKLNDLIISCL-----KSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + Sbjct: 61 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 118 Query: 126 YAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 +F+++ + + N+ ++ ++S+ I L + +++ I+ + + I K Sbjct: 119 QSFKLMVASGSIKAMNVLAKASAIISVGEVIQLVKLNERRIITIE-------EYYQIVKS 171 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L +CE GAI+A + + +R FG LG IFQ+ DDLLD Sbjct: 172 KTAELFGASCEVGAIIAEQVDHISKDIRYFGTLLGTIFQVIDDLLD 217 >gi|313159079|gb|EFR58454.1| putative geranyltranstransferase [Alistipes sp. HGB5] Length = 324 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 16/203 (7%) Query: 37 DRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RL + I Y+L GG K++R L+ +F AL AA+E H ++L+HDD+ M Sbjct: 26 ERLYAPIGYSLAGGGKRLRPMLLMLAHGIFTDRFQAALPAAAAVEVFHNFTLLHDDI--M 83 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRGKP+V+ ++ AI++G+ ++ A+ ++S +L I L + + Sbjct: 84 DNAAVRRGKPSVYAKWGPSVAILSGDAMMICAYRLLSEVPAELLPRI-----LGTFNTMA 138 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERL 210 L+ + GQ D+ +F + +V +++ M KT L+ + GA++ AS+ + +L Sbjct: 139 LE-VCEGQQYDM--DFESKRKVSVVEYMHMIELKTSVLLAGSITIGAMLGGASEEDCRKL 195 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 R F LG+ FQL DDLLD D Sbjct: 196 RRFAIELGLAFQLQDDLLDSYGD 218 >gi|28493021|ref|NP_787182.1| heptaprenyl diphosphate synthase component II [Tropheryma whipplei str. Twist] gi|28476061|gb|AAO44151.1| probable heptaprenyl diphosphate synthase component II [Tropheryma whipplei str. Twist] Length = 338 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 110/214 (51%), Gaps = 24/214 (11%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 ++DLLL+T + L+S GGK+ R LV + + + + +R A I Sbjct: 29 VEDLLLETVGDCHEIVSHLLVS-------GGKRARPLLVLLTSCMGSGINDAVIRAAAGI 81 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL HDD+ MDN YIR G T H + + AI+AG+ L A L Sbjct: 82 ELIHLGSLYHDDV--MDNAYIRHGSITAHRLWGKSAAILAGDFLFAKA--------GVLG 131 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFM-IQKMKTGALMCFACES 195 N+ + + T Q M+ GQ+ L I D +D + ++ + + KTG+L+ + + Sbjct: 132 LNLDKRAIAVQTE--AFQRMISGQLSETLGISDS-LDPLEAYIEVSRGKTGSLIAASAQV 188 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GAI+ AS + E LR FGE++G+ FQL DD++D Sbjct: 189 GAILGDASPSTLEPLRDFGESIGVAFQLVDDVID 222 >gi|146284189|ref|YP_001174342.1| geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri A1501] gi|145572394|gb|ABP81500.1| Geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri A1501] Length = 296 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 8/198 (4%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D + A+R L GK++R L+ + + L A+E IH SL DD+P M Sbjct: 39 DTVTQALREGTLAPGKRLRPLLLLLALGDLDADPAIGLDPACALEMIHAASLFLDDMPCM 98 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRG+PT+H+++ E A++A LL++A+ I + + L R+ + L +G Sbjct: 99 DNASLRRGQPTIHLRFGEDVAVLASVALLSHAYGITAMAPS-LSPRQRNDAVALLARAVG 157 Query: 156 LQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 QG++ GQ D+ Q + +D V ++KTG+L A E A++ A + LR Sbjct: 158 AQGLVRGQFRDLHGTGQSQQLDA--VIATNQLKTGSLFTAALELAALLVGADRALTAHLR 215 Query: 212 CFGENLGIIFQLADDLLD 229 F LG+ FQL DD+ D Sbjct: 216 GFASELGMAFQLLDDIAD 233 >gi|312137122|ref|YP_004004459.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Methanothermus fervidus DSM 2088] gi|311224841|gb|ADP77697.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Methanothermus fervidus DSM 2088] Length = 322 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 13/190 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV AL AIE IH +SLIHDD+ MD +RRG+ TVH Sbjct: 38 GGKRIRPSLVLLSTESVGGKIEDALNAATAIELIHTFSLIHDDI--MDKDEVRRGRATVH 95 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL--THNIGLQGMLGGQMLD 166 + + E AI+AG+ L + AFE++ LK NI + ++ + + GQ D Sbjct: 96 VIWGEPLAILAGDVLFSKAFEVM------LKSNIDEKRLVKVLDVMTKACVNLCKGQAYD 149 Query: 167 I--QDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + + F + E + + KT +L+ + + GAI+ + S+ E L +G+ LG+ FQ+ Sbjct: 150 MLFEKNFEVKEKEYLEMIYYKTASLIAASTKIGAIIGNGSKEEINALYNYGKFLGLAFQI 209 Query: 224 ADDLLDCEED 233 DD LD D Sbjct: 210 HDDYLDIAGD 219 >gi|237749261|ref|ZP_04579741.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13] gi|229380623|gb|EEO30714.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13] Length = 329 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 99/181 (54%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV A F + A IE IH +L+HDD+ +D +RRGK + + Sbjct: 50 GGKRIRPALVLLMARAFGYQGTQHQMLAAMIEFIHTATLLHDDV--VDEADLRRGKSSAN 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AF++I + +++R +LS N+ +G + Q+++++ Sbjct: 108 ALFGNAASVLVGDFLYTRAFQMIVAV-----NDMRILPVLSDATNLIAEGEVM-QLVNVR 161 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + IDE + + KT L + GA++AHAS+ E E +G +LGI FQL DDLL Sbjct: 162 NPAIDEKRYMEVIYAKTARLFEVSAVLGALIAHASEKEIEAAAAYGRSLGIAFQLVDDLL 221 Query: 229 D 229 D Sbjct: 222 D 222 >gi|84500217|ref|ZP_00998483.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597] gi|84392151|gb|EAQ04419.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597] Length = 331 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 9/201 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK+IR L A L + + + A +E IH +L+H Sbjct: 31 MASRHAPRIPEVTAHLVEAGGKRIRPMLTLAAARLCGYDGPYHIHLAATVEFIHTATLLH 90 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L AF+++ P N+R +LS Sbjct: 91 DDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPG-----NLRVLSILS 143 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 +G + Q+ QD E + + KT AL A E+G +A AS + Sbjct: 144 DAAATIAEGEVL-QLSAAQDLKTTEETYLQVIRGKTAALFSAATEAGGEIAGASPAQVRA 202 Query: 210 LRCFGENLGIIFQLADDLLDC 230 L +G+ LGI FQ+ADDLLD Sbjct: 203 LFDYGDALGIAFQMADDLLDW 223 >gi|327193306|gb|EGE60211.1| farnesyltranstransferase protein [Rhizobium etli CNPAF512] Length = 309 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 9/159 (5%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A R AAIE +HC SL+HDDLP DN +RRG+PTVH + E A++ G+ L+ AF+ + Sbjct: 72 ATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYL 131 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 S + L + ++++ + +G G++ GQ + E + + KTG+L Sbjct: 132 SL-QAALTPELGARMIEVVAEAVGPSHGLIAGQSM----EAMTHVPIDRYHHYKTGSLFV 186 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A GA+ + A ++ GE LG +Q+ADD+ D Sbjct: 187 AAATCGALASGADPAPWSKV---GELLGHAYQIADDIAD 222 >gi|319778271|ref|YP_004129184.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9] gi|317108295|gb|ADU91041.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9] Length = 303 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 80/243 (32%), Positives = 133/243 (54%), Gaps = 24/243 (9%) Query: 9 LQENSKRIDTILDDLLLQTASHMQ----TQHN--DRLLSAIRYALLG-GKKIRSFLVTEC 61 L + D+ L++++ + H++ + H+ +LL +RYA LG GK++R+ LV Sbjct: 3 LVSKTSHFDSWLEEVVKFSNRHLEEIFSSLHDVPPKLLEVMRYATLGPGKRLRAALVLAT 62 Query: 62 ASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 +F + RV +IE IH YSL+HDDLP MD+ +RRG+PT H++Y E A Sbjct: 63 YEVFQTTSPDSYDDYISRVVCSIELIHAYSLVHDDLPCMDDDDLRRGRPTCHVKYGEAMA 122 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQD--E 170 ++A + L ++E + L +I S+L++S T + G GM+GGQ++DI + Sbjct: 123 LLAADALQPLSYEHL------LGSHIDSKLLVSSTKELLRATGATGMVGGQVIDILNISN 176 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +D + + KTGAL+ E +I+ S E L+ + E +GI +Q+ DD+LD Sbjct: 177 HMDLEALKDMHSRKTGALIQACVEVVSILFKDSSLYYEELKRYSEYIGIAYQVVDDILDA 236 Query: 231 EED 233 +D Sbjct: 237 TQD 239 >gi|21492720|ref|NP_659794.1| farnesyltranstransferase protein [Rhizobium etli CFN 42] gi|218515967|ref|ZP_03512807.1| farnesyltranstransferase protein [Rhizobium etli 8C-3] gi|21467145|gb|AAM54808.1| farnesyltranstransferase protein [Rhizobium etli CFN 42] Length = 309 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 9/159 (5%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A R AAIE +HC SL+HDDLP DN +RRG+PTVH + E A++ G+ L+ AF+ + Sbjct: 72 ATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYL 131 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 S + L + ++++ + +G G++ GQ + E + + KTG+L Sbjct: 132 SL-QAALTPELGARMIEVVAEAVGPSHGLIAGQSM----EAMTHVPIDRYHHYKTGSLFV 186 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A GA+ + A ++ GE LG +Q+ADD+ D Sbjct: 187 AAATCGALASGADPAPWSKV---GELLGHAYQIADDIAD 222 >gi|190894247|ref|YP_001984541.1| farnesyltranstransferase protein [Rhizobium etli CIAT 652] gi|190699908|gb|ACE93991.1| farnesyltranstransferase protein [Rhizobium etli CIAT 652] Length = 328 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 9/159 (5%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A R AAIE +HC SL+HDDLP DN +RRG+PTVH + E A++ G+ L+ AF+ + Sbjct: 91 ATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYL 150 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 S + L + ++++ + +G G++ GQ + E + + KTG+L Sbjct: 151 SL-QAALTPELGARMIEVVAEAVGPSHGLIAGQSM----EAMTHVPIDRYHHYKTGSLFV 205 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A GA+ + A ++ GE LG +Q+ADD+ D Sbjct: 206 AAATCGALASGADPAPWSKV---GELLGHAYQIADDIAD 241 >gi|229918708|ref|YP_002887354.1| trans-hexaprenyltranstransferase [Exiguobacterium sp. AT1b] gi|229470137|gb|ACQ71909.1| Trans-hexaprenyltranstransferase [Exiguobacterium sp. AT1b] Length = 320 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 101/184 (54%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + +V +++E IH SL+HDD+ +D+ +RRGKPTV Sbjct: 43 GGKRIRPAFVLLSAGFGETKDIRLTKVASSLELIHMASLVHDDV--IDDAMLRRGKPTVM 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +YDE A+ GN L A ++S I S ++ + + ++ + G++ IQ Sbjct: 101 ERYDETVAMYTGNTLFGEAIRLVS--------EIDSPEVMRIMADT-MERICVGEINQIQ 151 Query: 169 DEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ ++ + ++ KT L+ +C +GA+++ AS ++L FG ++G+ FQ+ D Sbjct: 152 DQYEWGQSPKRYLDRIARKTALLIETSCAAGAVISGASPQTVKQLSLFGYDIGMAFQMTD 211 Query: 226 DLLD 229 DLLD Sbjct: 212 DLLD 215 >gi|218677523|ref|ZP_03525420.1| farnesyltranstransferase protein [Rhizobium etli CIAT 894] Length = 195 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 9/159 (5%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A R AAIE +HC SL+HDDLP DN +RRG+PTVH + E A++ G+ L+ AF+ + Sbjct: 21 ATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYL 80 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 S + L + ++++ + +G G++ GQ + E + + KTG+L Sbjct: 81 SL-QAALTPELGARMIEVVAEAVGPSHGLIAGQSM----EAMTHVPIDRYHHYKTGSLFV 135 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A GA+ + A ++ GE LG +Q+ADD+ D Sbjct: 136 AAATCGALASGADPAPWSKV---GELLGHAYQIADDIAD 171 >gi|281424797|ref|ZP_06255710.1| octylprenyl diphosphate synthase [Prevotella oris F0302] gi|281401167|gb|EFB31998.1| octylprenyl diphosphate synthase [Prevotella oris F0302] Length = 325 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 10/197 (5%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 H++ LLS + + GGK++R L+ A F +E +H SL+HDD+ Sbjct: 28 HDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNFGRVSSVTQHAAVGLELLHTASLVHDDV 87 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D RRG+ +V+ YD +++ G+ +L+ A +S +++ S+L +L+ Sbjct: 88 --VDESSERRGQASVNALYDNKVSVLVGDFILSTALLYVSKTHSEVIVRYLSELGRTLSD 145 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 LQ + +IQ+E I ET + I K KT AL GA A AS ++ E R Sbjct: 146 GEILQ------LTNIQNEAITETAYYEIIKRKTAALFEACAAIGAESAGASHDDVEAARK 199 Query: 213 FGENLGIIFQLADDLLD 229 FG+NLGIIFQ+ DD+ D Sbjct: 200 FGQNLGIIFQIRDDIFD 216 >gi|332977217|gb|EGK14013.1| heptaprenyl diphosphate synthase [Desmospora sp. 8437] Length = 323 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 18/208 (8%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLI 88 ++T H D SA GGK++R V ++V+ L +V +E IH +L+ Sbjct: 25 IRTDHRDLNRSAAHLLEAGGKRMRPVFVLLSGKFGEYDVDKLK--QVAVPLELIHMATLV 82 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D+ RRG+PTV ++D A+ G+ +L + I+S Q++D +++ Sbjct: 83 HDDV--IDDASTRRGRPTVKAKWDNRVAMYTGDYILGRSLAIVS----QIEDPKIHRVLS 136 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ---KMKTGALMCFACESGAIMAHASQN 205 + M G++ I+D F + + K KT LM +CE GA+++ A+ Sbjct: 137 PAIYQ-----MCRGEIEQIRDFFATDPSLIRYLHRIKRKTALLMSVSCELGALVSGAAPA 191 Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233 E RLR FG +G+ FQ+ DD+LD D Sbjct: 192 EVRRLRLFGYFVGMAFQITDDILDLTGD 219 >gi|326505838|dbj|BAJ91158.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326514464|dbj|BAJ96219.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 342 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 13/209 (6%) Query: 31 MQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 M + + + +A+R+A+L G K+ L L AL AA+E +H Sbjct: 61 MPIRPPESIHNAMRHAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAALPTAAALEMLH 120 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 SL+HDDLP D RRG+P+ H Y A++AG+ L A+ + S +T D + Sbjct: 121 GASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIS-RTPSPDPVS 179 Query: 144 SQLML----SLTHNIGLQGMLGGQMLDIQD-EFIDETQVFMIQKMKTGALMCFACESGAI 198 ++L L +G GM GQ LD+ + E +V + K G + + GA+ Sbjct: 180 HAVLLRVLAELARTVGSTGMAAGQFLDLAGASALGEAEVMQVLTKKFGEMAECSAACGAM 239 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDL 227 + A +E+ LR +G +G++++L DD+ Sbjct: 240 LGGAGPDEEAALRRYGRAIGVLYELVDDM 268 >gi|163741857|ref|ZP_02149247.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10] gi|161385030|gb|EDQ09409.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10] Length = 332 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 11/211 (5%) Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82 L+QT M ++H R+ + + GGK++R L A L + +++ A +E I Sbjct: 27 LIQT--RMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYSGDNHVKLAATVEFI 84 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H +L+HDD+ +D RRG+PT ++ +D ++++ G+ L +F+++ + +I Sbjct: 85 HTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVLDI 142 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202 + ++ LQ M D DE + + KT AL A ++G ++A+A Sbjct: 143 LANASATIAEGEVLQ------MTAASDLATDEEIYLQVVRGKTAALFSAATQAGGVVANA 196 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + + L +G+ LGI FQ+ADDLLD + D Sbjct: 197 PETQIDALFAYGDALGIAFQIADDLLDYQGD 227 >gi|299142039|ref|ZP_07035173.1| octylprenyl diphosphate synthase [Prevotella oris C735] gi|298576501|gb|EFI48373.1| octylprenyl diphosphate synthase [Prevotella oris C735] Length = 325 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 10/197 (5%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 H++ LLS + + GGK++R L+ A F +E +H SL+HDD+ Sbjct: 28 HDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNFGRVSSVTQHAAVGLELLHTASLVHDDV 87 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D RRG+ +V+ YD +++ G+ +L+ A +S +++ S+L +L+ Sbjct: 88 --VDESSERRGQASVNALYDNKVSVLVGDFILSTALLYVSKTHSEVIVRYLSELGRTLSD 145 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 LQ + +IQ+E I ET + I K KT AL GA A AS ++ E R Sbjct: 146 GEILQ------LTNIQNEAITETAYYEIIKRKTAALFEACAAIGAESAGASHDDVEAARK 199 Query: 213 FGENLGIIFQLADDLLD 229 FG+NLGIIFQ+ DD+ D Sbjct: 200 FGQNLGIIFQIRDDIFD 216 >gi|157363190|ref|YP_001469957.1| polyprenyl synthetase [Thermotoga lettingae TMO] gi|157313794|gb|ABV32893.1| Polyprenyl synthetase [Thermotoga lettingae TMO] Length = 276 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 14/194 (7%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+LL GK+IR L+ V A+E H SLIHDDLP +D+ + Sbjct: 27 AMAYSLLSAGKRIRPVLIKLICEDMGVQEDLIWNPAMAVELFHTASLIHDDLPQIDDSPL 86 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRG+P+ H+ + AI+AG+GL+ AF +++ +P + ++ L T+++ Sbjct: 87 RRGRPSCHVVFGNDMAILAGDGLMLMAFCVLNQTPADPVSKSMLFDLFSKSTYDV----- 141 Query: 160 LGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 L G+ +D+ EF D V + + KTGAL F GAI+ + E+L G Sbjct: 142 LIGEAMDV--EFTGKEKDINDVIEMYRKKTGALFSFCFAIGAILMKKLE-YLEKLINVGS 198 Query: 216 NLGIIFQLADDLLD 229 G+ FQ+ DDL D Sbjct: 199 TFGVWFQIVDDLKD 212 >gi|170749228|ref|YP_001755488.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] gi|170655750|gb|ACB24805.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] Length = 289 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 114/226 (50%), Gaps = 22/226 (9%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECA-SLFNV 67 E+ +RI+ LD + +H + LL+ A+RYA+ GG +IR L A + + Sbjct: 2 ESGQRIEMALD----RAVAHAEAPGAPPLLAEALRYAVFPGGHRIRPRLCLSVARACGDD 57 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + ++ AAIE +HC SL+HDDLP D+ +RR KP+VH+ + E A++ G+ L+ A Sbjct: 58 DPAGSVAAAAAIEFLHCASLVHDDLPCFDDAPMRRQKPSVHVAFGEPIAVLTGDALIVLA 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM----IQKM 183 FE ++ ++ + R L +GL G G I E++ + Q+ Sbjct: 118 FETLA--RSVGRHPAR------LGRLVGLLGRAAGSPSGIAAGQAWESEAHISLSDYQQA 169 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTGAL + A A+ E E R GE LG +Q+ADDL D Sbjct: 170 KTGALF---AAATVAGAAAAGAEPEPWRRLGECLGEAYQVADDLRD 212 >gi|284162658|ref|YP_003401281.1| dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631] gi|284012655|gb|ADB58608.1| Dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631] Length = 327 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 10/184 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + L AIE IH ++LIHDD+ MD RRG PTVH Sbjct: 49 GGKRLRPVLTLLSCEAIGRDWKPILPSAIAIELIHNFTLIHDDI--MDKDEYRRGVPTVH 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + E TAI+AG+ L AFEI+S + ++ IR+ + + ++ ++ + GQ +D++ Sbjct: 107 RLFGEATAILAGDTLFAKAFEILSKCNVEAENVIRA---VEVIADVCVK-ICEGQYMDME 162 Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D+ V KM KTG L+ +C A++ + + + L FG N GI FQ+ D Sbjct: 163 FEKRDDVSVEDYLKMVEKKTGVLIACSCSIPAVL-YGEEKYVKPLWDFGLNCGIGFQIHD 221 Query: 226 DLLD 229 D+LD Sbjct: 222 DVLD 225 >gi|28572234|ref|NP_789014.1| polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27] gi|28410365|emb|CAD66751.1| putative polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27] Length = 338 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 110/214 (51%), Gaps = 24/214 (11%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 ++DLLL+T + L+S GGK+ R LV + + + + +R A I Sbjct: 29 VEDLLLETVGDCHEIVSHLLVS-------GGKRARPLLVLLTSCMGSGINDAVIRAAAGI 81 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL HDD+ MDN YIR G T H + + AI+AG+ L A L Sbjct: 82 ELIHLGSLYHDDV--MDNAYIRHGSITAHRLWGKSAAILAGDFLFAKA--------GVLG 131 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFM-IQKMKTGALMCFACES 195 N+ + + T Q M+ GQ+ L I D +D + ++ + + KTG+L+ + + Sbjct: 132 LNLDKRAIAVQTE--AFQRMISGQLSETLGISDS-LDPLEAYIEVSRGKTGSLIAASAQV 188 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GAI+ AS + E LR FGE++G+ FQL DD++D Sbjct: 189 GAILGDASLSTLEPLRDFGESIGVAFQLVDDVID 222 >gi|260574939|ref|ZP_05842941.1| Polyprenyl synthetase [Rhodobacter sp. SW2] gi|259022944|gb|EEW26238.1| Polyprenyl synthetase [Rhodobacter sp. SW2] Length = 295 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 21/201 (10%) Query: 38 RLLSAIRYALL-GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 RL A+ YA+ GG +IR + L++ + + + AA+E IHC SL+HDDLPS Sbjct: 26 RLAQALPYAVTPGGARIRPTILLSVAIACGDDRPGLSNAAAAALELIHCASLVHDDLPSF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSL 150 D+ IRRGKPT+H ++E A++ G+ L+ AF++++ +P L L+ +L Sbjct: 86 DDADIRRGKPTIHKAFNEPLAVLTGDSLIILAFDVLARAAEDAPGRGLG------LIRTL 139 Query: 151 THNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G+ G+ GQ + + + + KTGAL A G A A+ E E Sbjct: 140 AKRSGMPDGICAGQGWESEPTV----NLSAYHRSKTGALFIAATCMG---AQAAGQEPEP 192 Query: 210 LRCFGENLGIIFQLADDLLDC 230 G +G FQ+ADDL D Sbjct: 193 WVELGSRIGEAFQVADDLRDA 213 >gi|163738897|ref|ZP_02146310.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107] gi|161387702|gb|EDQ12058.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107] Length = 332 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 11/211 (5%) Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82 L+QT M ++H R+ + + GGK++R L A L + +++ A +E I Sbjct: 27 LIQT--RMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYSGDNHVKLAATVEFI 84 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H +L+HDD+ +D RRG+PT ++ +D ++++ G+ L +F+++ + +I Sbjct: 85 HTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVLDI 142 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202 + ++ LQ M D DE + + KT AL A ++G ++A+A Sbjct: 143 LANASATIAEGEVLQ------MTAASDLATDEGIYLQVVRGKTAALFSAATQAGGVVANA 196 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + + L +G+ LGI FQ+ADDLLD + D Sbjct: 197 PETQIDALFAYGDALGIAFQIADDLLDYQGD 227 >gi|51891328|ref|YP_074019.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863] gi|51855017|dbj|BAD39175.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863] Length = 331 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 109/215 (50%), Gaps = 11/215 (5%) Query: 18 TILDDLL-LQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALR 74 +I DDL ++TA + +L + LL GGK+IR LV + V + Sbjct: 18 SIADDLRQVETAIEAALSTQETMLEEVSTHLLRSGGKRIRPALVILASRFPGVELKQVID 77 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V A+E IH +L+HDD+ +DN +RRG+PTV+ ++ +++ G+ L AF +++ Sbjct: 78 VAVAVELIHMATLVHDDV--VDNADLRRGRPTVNALWNNQVSVLTGDYLFAKAFTLLADT 135 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 + S+++ ++ QG L QM D E + KTG L+ AC Sbjct: 136 GNNRVVRLMSEVVREMS-----QGELA-QMASYFDVEQTEEDYYRRIARKTGYLIAEACR 189 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA+MA + + + + +G +G+ FQ+ADDLLD Sbjct: 190 LGAVMAGVGEEQVQAVYDYGMGVGLSFQIADDLLD 224 >gi|327482515|gb|AEA85825.1| geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri DSM 4166] Length = 307 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 8/198 (4%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D + A+R L GK++R L+ + + L A+E IH SL DD+P M Sbjct: 50 DTVTQALREGTLAPGKRLRPLLLLLALGDLDADPAIGLDPACALEMIHAASLFLDDMPCM 109 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRG+PT+H+++ E A++A LL++A+ I + + L R+ + L +G Sbjct: 110 DNASLRRGQPTIHLRFGEDVAVLASVALLSHAYGITAMAPS-LSPRQRNDAVALLARAVG 168 Query: 156 LQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 QG++ GQ D+ Q + +D V ++KTG+L A E A++ A + LR Sbjct: 169 AQGLVRGQFRDLHGTGQAQQLDA--VIATNQLKTGSLFTAALELAALLVGADRALTAHLR 226 Query: 212 CFGENLGIIFQLADDLLD 229 F LG+ FQL DD+ D Sbjct: 227 GFASELGMAFQLLDDIAD 244 >gi|223043259|ref|ZP_03613306.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit 2) (spore germination protein c3) [Staphylococcus capitis SK14] gi|314933652|ref|ZP_07841017.1| heptaprenyl diphosphate synthase, component II [Staphylococcus caprae C87] gi|222443470|gb|EEE49568.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit 2) (spore germination protein c3) [Staphylococcus capitis SK14] gi|313653802|gb|EFS17559.1| heptaprenyl diphosphate synthase, component II [Staphylococcus caprae C87] Length = 319 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 20/204 (9%) Query: 34 QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLI 88 Q D+ L + LL GGK++R V +S F + T+ RV A+E IH +L+ Sbjct: 22 QSTDQTLEEASFHLLSSGGKRVRPVFVI-LSSQFGTSEGTSEDTYRVAVALELIHMATLV 80 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D RRG+PT+ ++D+ TAI+ GN LL + +S K +I S ++ Sbjct: 81 HDDV--IDKSDKRRGRPTISKKWDQTTAILTGNFLLALGLQHLSEIKDARVHSIISNSIV 138 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQN 205 + G++ QD+F E T KT L+ A E GAI + AS+ Sbjct: 139 DVCR---------GELFQFQDQFNSEQNITNYLRRINRKTALLIQLATEVGAITSGASKE 189 Query: 206 EKERLRCFGENLGIIFQLADDLLD 229 +L+ G +G+ FQ+ DD+LD Sbjct: 190 TIRKLKLIGHYIGMSFQIIDDVLD 213 >gi|15604342|ref|NP_220858.1| octaprenyl-diphosphate synthase (ispB) [Rickettsia prowazekii str. Madrid E] gi|3861034|emb|CAA14934.1| OCTAPRENYL-DIPHOSPHATE SYNTHASE (ispB) [Rickettsia prowazekii] gi|292572096|gb|ADE30011.1| Octaprenyl-diphosphate synthase [Rickettsia prowazekii Rp22] Length = 327 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 20/227 (8%) Query: 8 KLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 K+Q+N K T L+DL+ L++ + + + L+ A GGK+IR L A + Sbjct: 6 KIQQNLKDEVTQLNDLIISCLKSDAELIEKVGKYLVEA------GGKRIRPLLTIITAKM 59 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F+ +++ +A+E IH +L+HDD+ +DN +RR KPT ++ + T+I+ G+ L Sbjct: 60 FDYKGNNHIKLASAVEFIHAATLLHDDV--VDNSTLRRFKPTANVIWGSKTSILVGDFLF 117 Query: 125 TYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 + +F+++ + N+ ++ +++S + L + +++ I DE Q I K Sbjct: 118 SQSFKLMVASGCIKAMNVLAKASVIISEGEVVQLVKLNERRIITI-----DEYQ--QIVK 170 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L ACE GAI+A + ++ FG LG IFQ+ DDLLD Sbjct: 171 SKTAELFGAACEVGAIIAEQVDRVSKDVQNFGRLLGTIFQVIDDLLD 217 >gi|254488187|ref|ZP_05101392.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101] gi|214045056|gb|EEB85694.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101] Length = 332 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 106/204 (51%), Gaps = 9/204 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + + A +E IH +L+H Sbjct: 32 MASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYDGPYHVHLAATVEFIHTATLLH 91 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L +F++++ +N+R +LS Sbjct: 92 DDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTE-----TNNMRVLAILS 144 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 +G + Q+ Q+ DE+ + + KT AL A E G ++A A + + Sbjct: 145 NASATIAEGEVL-QLTAAQNLATDESVYLQVVRGKTAALFSAATEVGGVIAGAPDAQVQA 203 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L FG+ LGI FQ+ DDLLD + D Sbjct: 204 LFDFGDALGIAFQIVDDLLDYQGD 227 >gi|78189407|ref|YP_379745.1| isoprenyl synthetase [Chlorobium chlorochromatii CaD3] gi|78171606|gb|ABB28702.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Chlorobium chlorochromatii CaD3] Length = 331 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 107/202 (52%), Gaps = 16/202 (7%) Query: 34 QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q L + RY L G GK+IR FL + AL V A+E +H ++LIHDD+ Sbjct: 31 QTPQTLYAPARYILEGKGKRIRPFLTLLACEAICGSPDDALDVALAVEILHNFTLIHDDI 90 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 MD +R G+PTVH ++ AI+ G+ ++ YA+E+ Q K + +++L+ L Sbjct: 91 --MDQAELRHGRPTVHKTWNVSAAILTGDMMIAYAYEL----ALQSKGSRQTELVHILND 144 Query: 153 -NIGLQGMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEK 207 NI + GQ LD++ E + + + MI K KTG L+ A E+G + +A+ + Sbjct: 145 ANITI---CEGQALDMELEEMPDASMSDYLDMIAK-KTGRLISAALEAGGVAGNATDEQL 200 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 L FGE +G FQ+ DD LD Sbjct: 201 RSLVLFGEKIGQAFQIQDDYLD 222 >gi|85705714|ref|ZP_01036811.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. 217] gi|85669704|gb|EAQ24568.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. 217] Length = 333 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 9/205 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R LV A L + + + A +E IH +L+H Sbjct: 33 MASRHAPRIPQVTAHLVEAGGKRLRPMLVLATADLCGYDGPFDVHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L AF+++ P + +I S + Sbjct: 93 DDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPGSLRVLDILSNASAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + QD E + + KT AL A E G ++A A ++ + Sbjct: 151 IAEGEVLQ------LSAAQDLATTEDIYLQVVRGKTAALFSAATEVGGVIAGAPEDHVKA 204 Query: 210 LRCFGENLGIIFQLADDLLDCEEDL 234 L +G+ LGI FQ+ DDLLD + D+ Sbjct: 205 LFEYGDALGIAFQIVDDLLDYQGDV 229 >gi|317123859|ref|YP_004097971.1| polyprenyl synthetase [Intrasporangium calvum DSM 43043] gi|315587947|gb|ADU47244.1| Polyprenyl synthetase [Intrasporangium calvum DSM 43043] Length = 336 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 29/241 (12%) Query: 1 MNGGLP---SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR--YALLGGKKIRS 55 + G P + LQ+ R+D +L ++ H D ++A A GGK+ R Sbjct: 12 LPGATPELMAHLQDGLARVDALLRTVV---------DHEDPFIAAASSHLAQAGGKRFRP 62 Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115 L A L +R A +E H SL HDD+ MD +RRG P+ + YD T Sbjct: 63 LLTLLSAELGEGVTDDVVRAAAGVELTHLASLYHDDV--MDEAEVRRGVPSANAVYDNST 120 Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFID 173 AI+ G+ L A E+I+ + I++Q + L GQ+ D + +D Sbjct: 121 AILVGDLLFGKASELIAGLGAEAV-LIQAQTFVRLCS---------GQIRDDRPCPPDVD 170 Query: 174 ETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ + KTG+L AC GA+ + S E +R +GE +G+ FQLADDL+D Sbjct: 171 PIDYYLGVLADKTGSLTATACRYGAMFSGGSPELVETMRSYGEKVGMTFQLADDLIDIAS 230 Query: 233 D 233 D Sbjct: 231 D 231 >gi|254561892|ref|YP_003068987.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens DM4] gi|254269170|emb|CAX25136.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens DM4] Length = 288 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 14/219 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECA-SLFNVNHL 70 +RI+T+LD+ + SH + LL+ AIRYA+ GG +IR L A + + + Sbjct: 5 RRIETVLDNAI----SHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPA 60 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T+ AAIE +HC SL+HDDLP D+ +RR KP+VH + A++ G+ L+ AFE Sbjct: 61 TSEAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAFET 120 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 ++ + + + L G++ GQ + + ++D + Q+ KTGAL Sbjct: 121 LARGVVRSPTRLAGLVGLIARAAGSPSGIVAGQAWE-SEPYVDLVE---YQQAKTGALF- 175 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A A+ R GE LG +Q+ADDL D Sbjct: 176 --AAATVAGAAAAGAPPLPWRLLGECLGAAYQVADDLRD 212 >gi|260429621|ref|ZP_05783598.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45] gi|260420244|gb|EEX13497.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45] Length = 333 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + A +E IH +L+H Sbjct: 33 MASKHAPRIPEVTAHLVEAGGKRLRPLLTLASARLCGYEGPYHVHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L +F+++ P NI S + Sbjct: 93 DDV--VDESSQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVEPGNLRVLNILSNAAAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + QD E + + KT AL A E G ++A + + + Sbjct: 151 IAEGEVLQ------LTAAQDLKTTEDIYLQVVRGKTAALFSAATEVGGVIAGVPEEQVQA 204 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L +G+ LGI FQ+ADDLLD + D Sbjct: 205 LFTYGDALGIAFQIADDLLDYQGD 228 >gi|323489688|ref|ZP_08094915.1| heptaprenyl diphosphate synthase component II [Planococcus donghaensis MPA1U2] gi|323396819|gb|EGA89638.1| heptaprenyl diphosphate synthase component II [Planococcus donghaensis MPA1U2] Length = 324 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V N N +V +E IH SL+HDD+ +D+ IRRG+PTV Sbjct: 46 GGKRIRPVFVLLAGKFGNYNVDVMKQVAVPLELIHMASLVHDDV--IDDSEIRRGQPTVK 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Q++ A+ G+ +L A E I+ ++ I S+ ++ + G+++ IQ Sbjct: 104 AQWNNSVAMYTGDFILARALEHITEIESPRVHEILSKTLIEVCR---------GEIIQIQ 154 Query: 169 DEF-IDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ +D+ F K KT L+ +CE GA+++ + LR FG +G+ FQ+ D Sbjct: 155 DKYRLDQNLRDYFRRIKRKTALLISSSCELGALVSGTDEKTAAHLRRFGYFIGMSFQIID 214 Query: 226 DLLD 229 D+LD Sbjct: 215 DILD 218 >gi|149202965|ref|ZP_01879936.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. TM1035] gi|149143511|gb|EDM31547.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. TM1035] Length = 333 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 9/204 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R LV A L + + + A +E IH +L+H Sbjct: 33 MASRHAPRIPQVTAHLVEAGGKRLRPMLVLATADLCGYDGPFDVHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L AF+++ P + +I S + Sbjct: 93 DDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPGSLRVLDILSNASAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + QD E + + KT AL A E G ++A A + + + Sbjct: 151 IAEGEVLQ------LSAAQDLATTEDIYLQVVRGKTAALFSAATEVGGVIAGAPETQIKA 204 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L +G+ LGI FQ+ DDLLD + D Sbjct: 205 LFEYGDALGIAFQIVDDLLDYQGD 228 >gi|67459231|ref|YP_246855.1| octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2] gi|67004764|gb|AAY61690.1| Octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2] Length = 327 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 125/227 (55%), Gaps = 20/227 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65 K+Q++ K T L+DL++ + ++ L+ + LL GGK+IR L A +F Sbjct: 6 KIQQDLKDEVTKLNDLIISCL-----KSDEELIETVGKYLLEAGGKRIRPLLTIITAKMF 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + Sbjct: 61 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 118 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182 +F+++ + + I++ +L+ I +G + Q++ + + IDE Q I K Sbjct: 119 QSFKLMVASGS-----IKAMNVLAKASAIISEGEVI-QLVKLNERRIITIDEYQ--QIVK 170 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L +CE GAI+A + + +R FG+ LG IFQ+ DDLLD Sbjct: 171 SKTAELFGASCEVGAIIAEQVDHISKDMRDFGKLLGTIFQVIDDLLD 217 >gi|304314300|ref|YP_003849447.1| geranyl pyrophosphate synthase [Methanothermobacter marburgensis str. Marburg] gi|2497458|sp|Q53479|IDSA_METTM RecName: Full=Bifunctional short chain isoprenyl diphosphate synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; AltName: Full=Geranyltranstransferase gi|11279236|pir||T45152 bifunctional short chain isoprenyl diphosphate synthase [imported] - Methanobacterium thermoautotrophicum gi|913252|gb|AAB32421.1| bifunctional short chain isoprenyl diphosphate synthase [Methanothermobacter thermautotrophicus] gi|302587759|gb|ADL58134.1| predicted geranyl pyrophosphate synthase [Methanothermobacter marburgensis str. Marburg] Length = 325 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 122/227 (53%), Gaps = 27/227 (11%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75 I I D LL+ + H+ T GGKKIR L N A V Sbjct: 23 ISDITPDTLLKASEHLITA--------------GGKKIRPSLALLSCEAVGGNPEDAAGV 68 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AAIE IH +SLIHDD+ MD+ +RRG+P+VH+ + E AI+AG+ L + AFE + Sbjct: 69 AAAIELIHTFSLIHDDI--MDDDEMRRGEPSVHVIWGEPMAILAGDVLFSKAFEAV---- 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKM--KTGALMCFA 192 + D+ R + L++ + ++ + GQ LD+ +E +D T+ ++ + KT AL+ A Sbjct: 123 IRNGDSERVKDALAVVVDSCVK-ICEGQALDMGFEERLDVTEDEYMEMIYKKTAALIAAA 181 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 ++GAIM AS+ E E L +G+ +G+ FQ+ DD LD EE L K Sbjct: 182 TKAGAIMGGASEREVEALEDYGKFIGLAFQIHDDYLDVVSDEESLGK 228 >gi|149913258|ref|ZP_01901792.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b] gi|149813664|gb|EDM73490.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b] Length = 333 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 9/204 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A + + + A +E IH +L+H Sbjct: 33 MASRHAPRIPEVTAHLVEAGGKRLRPMLTLATADMCGYGGAFDVHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L AF+++ P N+R +LS Sbjct: 93 DDV--VDESQQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPG-----NLRVLDILS 145 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + +G + Q+ +D DE + + KT AL A E G ++A A + + + Sbjct: 146 NAAAVIAEGEVL-QLSAARDLKTDENIYLQVVRGKTAALFSAATEVGGVIADAPEAQIKA 204 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L +G+ LGI FQ+ DDLLD + D Sbjct: 205 LFDYGDALGIAFQIVDDLLDYQGD 228 >gi|330886861|gb|EGH20296.1| geranyltranstransferase [Pseudomonas syringae pv. mori str. 301020] Length = 296 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 123/235 (52%), Gaps = 23/235 (9%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68 ++ R++ L+ L + + +RL A+RY+++ GGK++R L C +L V Sbjct: 8 QSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF Sbjct: 63 E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121 Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGM--------LGGQMLDIQDEFIDETQVFM 179 + +P +D R Q++ L G G LG L +D+ + Sbjct: 122 TALLAPHLTSRDAETRLQMVNPLAAAAGPAGYGGAGQAIDLGSVGLK-----LDQAALEY 176 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D Sbjct: 177 MHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESD 231 >gi|61653218|gb|AAX48172.1| geranylgeranyl pyrophosphate synthase [uncultured proteobacterium DelRiverFos13D03] Length = 293 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 13/197 (6%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSM 95 +L A+ YA+ GG +IR ++ A + GA A+E IHC SL+HDDLP Sbjct: 26 QLAQALHYAVTPGGARIRPTILLSVAMACGDDRPALSDAGAVALEMIHCASLVHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNI 154 D+ RRGK TVH + E A++ G+ L+ AF+I++ + D R+ Q++ L+ Sbjct: 86 DDADTRRGKATVHKAFSEPLAVLTGDSLIVLAFDILA--EAAGDDAKRALQMIRVLSRRT 143 Query: 155 GLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G+ G+ GQ + + E + + KTGAL A + GA+ A E L Sbjct: 144 GMPDGICAGQGWESEAEV----NLSAYHRAKTGALFIAATQMGALAAGQDCEPWEEL--- 196 Query: 214 GENLGIIFQLADDLLDC 230 G +G FQ+ADDL D Sbjct: 197 GARIGEAFQVADDLRDA 213 >gi|126740547|ref|ZP_01756234.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6] gi|126718348|gb|EBA15063.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6] Length = 332 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 112/212 (52%), Gaps = 13/212 (6%) Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82 L+QT M ++H R+ + + GGK++R L A L +++ A +E I Sbjct: 27 LIQT--RMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYEGEHHIKLAATVEFI 84 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDN 141 H +L+HDD+ +D RRG+PT ++ +D ++++ G+ L + +F++ + + ++ D Sbjct: 85 HTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLKVLD- 141 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 ++ + + I +L QM + DE + + KT AL A E G ++A Sbjct: 142 ----ILANASATIAEGEVL--QMTAASNLATDEAVYLQVVRGKTAALFSAATEVGGVIAG 195 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 AS+ E + L +G+ LGI FQ+ADDLLD + D Sbjct: 196 ASETEIKALFDYGDALGIAFQIADDLLDYQGD 227 >gi|183220059|ref|YP_001838055.1| octoprenyl-diphosphate synthase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910179|ref|YP_001961734.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774855|gb|ABZ93156.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778481|gb|ABZ96779.1| Octoprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase; OPP synthetase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 317 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR F NV ++ L VG+ E IH SL+HDD+ +DN IRRGKPT+ Sbjct: 40 GGKRIRPFSHYLFCQFMNVKDVSWLDVGSVAELIHAASLLHDDV--VDNAPIRRGKPTIG 97 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + TAI+AG+ LL ++S I SQ++ L+ + LQ M + +I Sbjct: 98 ASFGNKTAILAGDYLLACGISRLNSLGNPDLMEIFSQVLRDLSVSELLQ-MEWEKNPNIT 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + D+ I KT +L E+ AI+A+ S+ +++ R FG LG +FQ DD L Sbjct: 157 LKIYDQ-----IIYGKTASLFGVCTEAAAILANQSKEKRKEFRQFGVRLGKLFQKKDDCL 211 Query: 229 DCEED 233 D ED Sbjct: 212 DYFED 216 >gi|260460355|ref|ZP_05808607.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] gi|259034000|gb|EEW35259.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] Length = 338 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 121/240 (50%), Gaps = 22/240 (9%) Query: 11 ENSKRIDTILDDLLLQTASHM---------QTQHNDRLLSAIRYALL--GGKKIRSFLVT 59 EN KR + DL+ TA+ M + + ++ + L+ GGK++R L Sbjct: 8 ENGKREPASIKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTL 67 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A +F + +++ A+E +H +L+HDD+ +D +RRGK T + + +++ Sbjct: 68 AAAQMFGYSGEGHVKLATAVEFMHTATLLHDDV--VDESGMRRGKKTARMIWGNQASVLV 125 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ LL AF ++ + + + +LS +I +G + Q+ ++ E + F Sbjct: 126 GDFLLGQAFRMMVDVGS-----LEALDILSSAASIIAEGEVM-QLAAAKNLETTEDEHFA 179 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 + K KT AL A E G ++A A++N++ LR +G NLG+ FQL DD LD +DL K Sbjct: 180 VIKAKTAALFSAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGK 239 >gi|163761016|ref|ZP_02168094.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica DFL-43] gi|162281797|gb|EDQ32090.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica DFL-43] Length = 338 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A++F + +++ ++E +H +L+HDD+ +D +RRG+ T Sbjct: 57 GGKRLRPMLTLASATMFGYSGDFHIKLATSVEFMHTATLLHDDV--VDESDLRRGRSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+++ + ++ S + LQ + M + Sbjct: 115 MIWGNQASVLVGDFLLGQAFKMMVEVGSLEALDVLSTAAAVIAEGEVLQLSVAKNMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL ACE G I+A S+ E+ LR +G NLG+ FQL DD+L Sbjct: 175 DDYLS------VIRAKTAALFSAACEVGPIIAETSKAERSALRSYGINLGLAFQLIDDVL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|268316794|ref|YP_003290513.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252] gi|262334328|gb|ACY48125.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252] Length = 330 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 12/208 (5%) Query: 33 TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T+ L +RY L G GK++R L+ A L+ + L A+E H ++L+HDD Sbjct: 30 TREPAELYEPVRYVLSGTGKRMRPVLLMLAAELYGRPAESVLPAALAVEVFHAFTLVHDD 89 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + MD+ RRG+PTVH+Q+DE TA++ G+ L+ ++ ++ +N +L++ Sbjct: 90 I--MDHAAERRGRPTVHVQWDEATALLCGDYLMGLSYALLGQ-----VENAPLARVLAMF 142 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKE 208 H + ++ + GQ LD E V +M KT AL+ + G ++ A + + + Sbjct: 143 HRM-VERLCEGQALDKAFETRAHVSVAEYLQMVDGKTSALLELCLQLGGLLGGAGEADLQ 201 Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236 L G NLG FQ+ DDLLD P+ Sbjct: 202 ALEQLGRNLGRAFQIQDDLLDLTATSPQ 229 >gi|82702937|ref|YP_412503.1| farnesyltranstransferase [Nitrosospira multiformis ATCC 25196] gi|82411002|gb|ABB75111.1| Farnesyltranstransferase [Nitrosospira multiformis ATCC 25196] Length = 322 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A F + A +E IH +L+HDD+ +D +RR K T + Sbjct: 43 GGKRLRPALVILSAGAFGYTGQYHYNLAAIVEFIHTATLLHDDV--VDASELRRSKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ DN+R +L+ N +G + Q+L+++ Sbjct: 101 ALFGNAASVLVGDFLYSRAFQMMVE-----VDNMRVMRVLADATNTIAEGEVL-QLLNVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + KT L A GAI+ +AS E+E + +G +LG FQL DD+L Sbjct: 155 DPDVDEENYLRVIRYKTAKLFEAATRLGAILGNASPAEEEAMAVYGMHLGTAFQLTDDML 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSGD 219 >gi|325690177|gb|EGD32181.1| geranyltranstransferase [Streptococcus sanguinis SK115] Length = 291 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 105/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F++ A +V +A+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLELIQAFDLELTEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ + +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + I KTG L+ + + ++A +++LR GE LG+ FQ+ D Sbjct: 156 QGEGQAISLEDLKTIHANKTGKLLTYPFVAAGLIAEVEYFVQDKLRRIGELLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|330444019|ref|YP_004377005.1| geranyl transtransferase [Chlamydophila pecorum E58] gi|328807129|gb|AEB41302.1| geranyl transtransferase [Chlamydophila pecorum E58] Length = 293 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 100/203 (49%), Gaps = 11/203 (5%) Query: 41 SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + + YAL GGK+IR LV A H + A+E H +LI DDLP MDN Sbjct: 34 APVEYALKTGGKRIRPLLVCMLAHGIG-KHCDVMDSALAVEFAHTSTLIADDLPCMDNDD 92 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--------NIRSQLMLSLT 151 RRG+PTVH + E A++A L+ A+ +LK ++ ++L +T Sbjct: 93 ERRGRPTVHKVFGEALALLASYALIPAAYSHFHKNAKKLKKQGYNPQAIDVAYDIILEVT 152 Query: 152 H-NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 + NIG G+LGGQ D+ V I KTGAL A SG + S N ++ Sbjct: 153 NRNIGCAGVLGGQYDDMFFSNKGREHVQSIMVKKTGALFEIASVSGWLFGGGSPNLLPQI 212 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 F + G++FQ+ DD LD E+D Sbjct: 213 IEFSRHFGLLFQIKDDFLDYEKD 235 >gi|332796336|ref|YP_004457836.1| farnesyltranstransferase [Acidianus hospitalis W1] gi|332694071|gb|AEE93538.1| farnesyltranstransferase [Acidianus hospitalis W1] Length = 326 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 126/230 (54%), Gaps = 15/230 (6%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70 E K D I+ ++ + +++ + + ++I GGK++R + + LF+ + Sbjct: 2 ELDKYFDEIIKNVNEEIEKYIKGEPKELYDASIYLLKAGGKRLRPLITVASSDLFSGDRK 61 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A + AA+E +H ++LIHDD+ MD +RRG PTVH+++ AI+AG+ L AFE+ Sbjct: 62 RAYKAAAAVEILHNFTLIHDDI--MDEDTLRRGMPTVHVKWGVPMAILAGDLLHAKAFEV 119 Query: 131 ISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKT 185 +S L D+ R + LS + ++ + + GQ +D++ E +E + MI+K KT Sbjct: 120 LSEALEGL-DSKRFYMGLSEFSKSVII--IAEGQAMDMEFENRQDVTEEEYLEMIKK-KT 175 Query: 186 GALMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L F+C + G +++ A + E L+ FG NLGI FQ+ DD+L D Sbjct: 176 AQL--FSCSAFLGGLVSGAEDKDLELLKEFGLNLGIAFQIIDDILGLTAD 223 >gi|89052673|ref|YP_508124.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1] gi|88862222|gb|ABD53099.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1] Length = 290 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 16/210 (7%) Query: 27 TASHMQTQHN---DRLLSAIRYALL-GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIEC 81 +A+ Q Q N +L SA+ Y++ GG +IR + A + + A AIE Sbjct: 12 SAAITQAQGNVAPTKLASALEYSVTPGGARIRPTICLSVALACGDPQPAMADAAATAIEL 71 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IHC SL+HDD+P D+ +RRGKP+VH Y E A++AG+ L+ +FE+++ + D Sbjct: 72 IHCASLVHDDMPCFDDADVRRGKPSVHKAYSEPLALLAGDSLIIASFEVLT--RVAHHDP 129 Query: 142 IRS-QLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 +R+ +LM L + G+ G+ GQ + +D+ + + KTGAL A Sbjct: 130 LRAIELMKILGQSTGMPGGICAGQGWESEDKI----DLSAYHRAKTGALFTAATRM---G 182 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A A+ + E G +G FQ+ADDL D Sbjct: 183 AAAAGEDPEPWTELGARIGEAFQVADDLRD 212 >gi|76789367|ref|YP_328453.1| dimethylallyltransferase [Chlamydia trachomatis A/HAR-13] gi|76167897|gb|AAX50905.1| dimethylallyltransferase [Chlamydia trachomatis A/HAR-13] Length = 291 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 101/205 (49%), Gaps = 11/205 (5%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I YALLGG K++R LV A + L AIE IH +LI DDLP MD+ Sbjct: 29 LRDPIEYALLGGGKRVRPLLVGLFAEGVH-KERDVLDTAIAIEYIHTSTLIADDLPCMDD 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK---------DNIRSQLML 148 +RRGKP+VH +DE +A++A L+ A+ I LK + ++ Sbjct: 88 DDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKAVVSCEQDVEEAYEDILE 147 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + G+ G+LGGQ DI + V I K KTGAL AC SG + + Sbjct: 148 LIELRFGIGGILGGQYEDIFFHDFSKENVLGIIKKKTGALFEIACVSGWLFGGGERESST 207 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 + F E+ G++FQ+ DDL D +D Sbjct: 208 LVAEFAEHFGLLFQIRDDLADLSQD 232 >gi|2644975|emb|CAA05825.1| IspA protein; partial [Wolinella succinogenes] Length = 163 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 6/137 (4%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 +N+ L +R GGK+ R L+ ++L + +A A+E +H YSLIH Sbjct: 24 FHPHYNEYLWEMVRN---GGKRFRPRLLLGVVSALAPLLVKSAYAPALALEILHTYSLIH 80 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP+MDN RRG PT+H++YDE +A++AG+ L T+AF +++ + L + + L+ Sbjct: 81 DDLPAMDNAATRRGHPTLHVKYDEASAVLAGDALNTHAFYLLA--QAPLGSDTKVALVRE 138 Query: 150 LTHNIGLQGMLGGQMLD 166 L G GM+ GQ LD Sbjct: 139 LASAGGAGGMVLGQALD 155 >gi|317504363|ref|ZP_07962347.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606] gi|315664485|gb|EFV04168.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606] Length = 325 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A F +E +H SL+HDD+ +D RRG+ +V+ Sbjct: 44 GGKRMRPILILLMAKNFGCVSSVTQHAAVGLELLHTASLVHDDV--VDESSERRGQASVN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 YD +++ G+ +L+ A +S +++ S+L +L+ LQ + +IQ Sbjct: 102 ALYDNKVSVLVGDFILSTALLYVSKTHSEVIVRRLSELGRTLSDGEILQ------LTNIQ 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E I ET + I K KT AL GA A AS ++ E R FG+NLGIIFQ+ DD+ Sbjct: 156 KEAISETAYYEIIKRKTAALFESCAAIGAESAGASDDDVEAARLFGQNLGIIFQIRDDIF 215 Query: 229 D 229 D Sbjct: 216 D 216 >gi|15605359|ref|NP_220145.1| dimethylallyltransferase [Chlamydia trachomatis D/UW-3/CX] gi|237803057|ref|YP_002888251.1| dimethylallyltransferase [Chlamydia trachomatis B/Jali20/OT] gi|237804978|ref|YP_002889132.1| dimethylallyltransferase [Chlamydia trachomatis B/TZ1A828/OT] gi|255311451|ref|ZP_05354021.1| dimethylallyltransferase [Chlamydia trachomatis 6276] gi|255317752|ref|ZP_05358998.1| dimethylallyltransferase [Chlamydia trachomatis 6276s] gi|3329075|gb|AAC68232.1| Geranylgeranyl pyrophosphate synthase [Chlamydia trachomatis D/UW-3/CX] gi|231273278|emb|CAX10193.1| dimethylallyltransferase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274291|emb|CAX11086.1| dimethylallyltransferase [Chlamydia trachomatis B/Jali20/OT] gi|296436165|gb|ADH18339.1| dimethylallyltransferase [Chlamydia trachomatis G/9768] gi|296437093|gb|ADH19263.1| dimethylallyltransferase [Chlamydia trachomatis G/11222] gi|296438025|gb|ADH20186.1| dimethylallyltransferase [Chlamydia trachomatis G/11074] gi|297140527|gb|ADH97285.1| dimethylallyltransferase [Chlamydia trachomatis G/9301] gi|297748758|gb|ADI51304.1| Dimethylallyltransferase [Chlamydia trachomatis D-EC] gi|297749638|gb|ADI52316.1| Dimethylallyltransferase [Chlamydia trachomatis D-LC] Length = 291 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 101/205 (49%), Gaps = 11/205 (5%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I YALLGG K++R LV A + L AIE IH +LI DDLP MD+ Sbjct: 29 LRDPIEYALLGGGKRVRPLLVGLFAEGVH-KERDVLDTAIAIEYIHTSTLIADDLPCMDD 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK---------DNIRSQLML 148 +RRGKP+VH +DE +A++A L+ A+ I LK + ++ Sbjct: 88 DDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKAVVSCEQDVEEAYEDILE 147 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + G+ G+LGGQ DI + V I K KTGAL AC SG + + Sbjct: 148 LIELRFGVGGILGGQYEDIFFHDFSKENVLGIIKKKTGALFEIACVSGWLFGGGERESST 207 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 + F E+ G++FQ+ DDL D +D Sbjct: 208 LVAEFAEHFGLLFQIRDDLADLSQD 232 >gi|270265042|ref|ZP_06193305.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13] gi|270040976|gb|EFA14077.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13] Length = 310 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 30 GGKRIRPMIAVLAARALHYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S +++R ++S N+ +G + Q++++ Sbjct: 88 AAFGNAASVLVGDFIYTRAFQMMTS-----LESLRVLALMSEAVNVIAEGEVL-QLMNVN 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI++ AS+ E++ L+ +G LG FQL DDLL Sbjct: 142 DPDITEESYMRVIYSKTARLFEAAAQSSAILSEASEAEEKALQDYGRYLGTAFQLIDDLL 201 Query: 229 DCEED 233 D D Sbjct: 202 DYSAD 206 >gi|255349012|ref|ZP_05381019.1| dimethylallyltransferase [Chlamydia trachomatis 70] gi|255503551|ref|ZP_05381941.1| dimethylallyltransferase [Chlamydia trachomatis 70s] gi|255507230|ref|ZP_05382869.1| dimethylallyltransferase [Chlamydia trachomatis D(s)2923] gi|289525671|emb|CBJ15152.1| dimethylallyltransferase [Chlamydia trachomatis Sweden2] gi|296435238|gb|ADH17416.1| dimethylallyltransferase [Chlamydia trachomatis E/150] gi|296438957|gb|ADH21110.1| dimethylallyltransferase [Chlamydia trachomatis E/11023] Length = 291 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 101/205 (49%), Gaps = 11/205 (5%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I YALLGG K++R LV A + L AIE IH +LI DDLP MD+ Sbjct: 29 LRDPIEYALLGGGKRVRPLLVGLFAEGVH-KERDVLDTAIAIEYIHTSTLIADDLPCMDD 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK---------DNIRSQLML 148 +RRGKP+VH +DE +A++A L+ A+ I LK + ++ Sbjct: 88 DDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKAVVSCEQDVEEAYEDILE 147 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + G+ G+LGGQ DI + V I K KTGAL AC SG + + Sbjct: 148 LIELRFGVGGILGGQYEDIFFHDFSKENVLGIIKKKTGALFEIACVSGWLFGGGERESST 207 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 + F E+ G++FQ+ DDL D +D Sbjct: 208 LVAEFAEHFGLLFQIRDDLADLSQD 232 >gi|302526347|ref|ZP_07278689.1| polyprenyl diphosphate synthase [Streptomyces sp. AA4] gi|302435242|gb|EFL07058.1| polyprenyl diphosphate synthase [Streptomyces sp. AA4] Length = 343 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 17/191 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +RS L A + A+E +H +SL+HDDL MD RR +PTV Sbjct: 63 GGKAVRSALAVVSAQAAGAPVEVGVPGAVAVELVHNFSLVHDDL--MDGDTERRHRPTVW 120 Query: 109 IQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + +AI+ G+ +L A E++ SP + ++ L H GQ L Sbjct: 121 ALWGSASAILTGDAMLALAQEVVLDSGSPHAVAAGRLLTETTRRLIH---------GQFL 171 Query: 166 DIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D+ E D+ + + KTGAL+ + GA++A A + L FGE +G+ FQ Sbjct: 172 DVAFEQRDDVGLAECVTMAAGKTGALLSASAAIGAVLAGAPAEVVDALSVFGEEIGLAFQ 231 Query: 223 LADDLLDCEED 233 L DD+L D Sbjct: 232 LVDDVLGIWGD 242 >gi|239631997|ref|ZP_04675028.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066682|ref|YP_003788705.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str. Zhang] gi|239526462|gb|EEQ65463.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439089|gb|ADK18855.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str. Zhang] Length = 283 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 114/199 (57%), Gaps = 9/199 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L +A+ Y++ GGK++R L+ ++++ AL AA+E +H YSLIHDDLP+ Sbjct: 25 NPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALEYVHTYSLIHDDLPA 84 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRGKPT H Q+ E AI+AG+ LLT AF I+S + K Q+ L Sbjct: 85 MDDDDLRRGKPTNHKQFGEALAILAGDALLTDAFAILSRQYPE-KGAACVQI---LAEAA 140 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQ+LD+ E ++ + +++M KTGAL+ A G ++ + ++ L Sbjct: 141 GSNGMVGGQVLDMDGEN-EQYHLETLKRMHEAKTGALIQAAIAMGGLLVTIPETDQTALA 199 Query: 212 CFGENLGIIFQLADDLLDC 230 F G+ FQ+ DD+ D Sbjct: 200 DFSAAFGLGFQIKDDINDV 218 >gi|157827248|ref|YP_001496312.1| octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389] gi|157802552|gb|ABV79275.1| Octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389] Length = 327 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 105/183 (57%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L A +F+ N + +++ +A+E IH +L+HDD+ +D+ +RR KPT + Sbjct: 44 GGKRIRPLLTIITAKMFDYNGDSHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLD 166 + + T+I+ G+ L + +F+++ + + N+ ++ ++S + L + ++++ Sbjct: 102 VIWGSKTSILVGDFLFSQSFKLMVASGSIKAMNVLAKASAIISKGEVVQLVKLNERRLIN 161 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 I+ E Q I K KT L +C GAI+A+ S + + + FG+ LG IFQ+ DD Sbjct: 162 IE-----EYQ--QIVKSKTAELFGASCSVGAIIANQSDDISKNMEEFGKLLGTIFQVIDD 214 Query: 227 LLD 229 LLD Sbjct: 215 LLD 217 >gi|84683979|ref|ZP_01011881.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84667732|gb|EAQ14200.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Rhodobacterales bacterium HTCC2654] Length = 331 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 13/230 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQT----ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 L K + +R+ L D L Q + M ++H R+ + + GGK++R L Sbjct: 2 LDQKAHKPHERLAAHLKDDLSQVDEMIRARMASEHAPRIPEVTAHLVDAGGKRLRPMLTL 61 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A L + + A+E IH +L+HDD+ +D RRG+PT ++ +D ++++ Sbjct: 62 ASARLCGYEGGHHIHLATAVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLV 119 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L +F++++ D++R +LS +G + Q+ QD E F Sbjct: 120 GDYLFARSFQLMTEA-----DSLRVLQVLSNASATITEGEVL-QLTAAQDLGTTEDTYFK 173 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + KT AL A E G I+A S++ + L +G+ LGI FQ+ DDLLD Sbjct: 174 VVRGKTAALFAAATEVGGILAGVSEDRIKALHDYGDALGIAFQVVDDLLD 223 >gi|327382666|gb|AEA54142.1| Geranylgeranyl diphosphate synthase [Lactobacillus casei LC2W] gi|327385860|gb|AEA57334.1| Geranylgeranyl diphosphate synthase [Lactobacillus casei BD-II] Length = 283 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 115/199 (57%), Gaps = 9/199 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L +A+ Y++ GGK++R L+ ++++ AL AA+E +H YSLIHDDLP+ Sbjct: 25 NPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALEYVHTYSLIHDDLPA 84 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRGKPT H Q+ E AI+AG+ LLT AF I+S Q ++ + + + L Sbjct: 85 MDDDDLRRGKPTNHKQFGEALAILAGDALLTDAFAILSR---QYREKGAACVQI-LAEAA 140 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQ+LD+ E ++ + +++M KTGAL+ A G + + ++ L Sbjct: 141 GSNGMVGGQVLDMDGEN-EQYHLETLKRMHEAKTGALIQAAIAMGGLFVTIPETDQTALA 199 Query: 212 CFGENLGIIFQLADDLLDC 230 F G+ FQ+ DD+ D Sbjct: 200 DFSAAFGLGFQIKDDINDV 218 >gi|327405188|ref|YP_004346026.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823] gi|327320696|gb|AEA45188.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823] Length = 329 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 11/186 (5%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L GK++R +V A F V A+ AIE H ++L+HDD+ MD +RRG TV Sbjct: 45 LEGKRLRPIMVLMAAQGFGVTTEAAMSAAIAIEVFHNFTLVHDDI--MDKALVRRGTITV 102 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y AI+ G+ +L ++ ++ T+ K + + L + Q ++ GQ D+ Sbjct: 103 HEKYGVDKAIVTGDAMLPHSMGLLIKG-TEEKSAVLMKSFLKMA-----QEVMEGQQYDM 156 Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + E + + + ++KT L ACE GAI+ +AS ++++L FG G+ FQ+ Sbjct: 157 EFETQEIVTVEEYMNMIRLKTSVLFGCACEIGAILGNASIEDQKKLYDFGLYTGLAFQIM 216 Query: 225 DDLLDC 230 DD LD Sbjct: 217 DDYLDT 222 >gi|114766799|ref|ZP_01445733.1| decaprenyl diphosphate synthase [Pelagibaca bermudensis HTCC2601] gi|114540993|gb|EAU44051.1| decaprenyl diphosphate synthase [Roseovarius sp. HTCC2601] Length = 331 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + A +E IH +L+H Sbjct: 31 MASKHAPRIPEVTAHLVEAGGKRLRPLLTLASARLCGYEGPFHVHLAATVEFIHTATLLH 90 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L AF+++ P NI S + Sbjct: 91 DDV--VDESKQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPGNLRVLNILSNAAAT 148 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + QD +E + + KT AL A E G ++A + + + Sbjct: 149 IAEGEVLQ------LTAAQDLRTNEDIYLQVVRGKTAALFSAATEVGGVIAGVEEEQVQA 202 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L +G+ LGI FQ+ DDLLD + D Sbjct: 203 LFDYGDALGIAFQIVDDLLDYQGD 226 >gi|50954065|ref|YP_061353.1| trans-hexaprenyltranstransferase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950547|gb|AAT88248.1| trans-hexaprenyltranstransferase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 353 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 21/226 (9%) Query: 12 NSKRIDTILDD--LLLQTASHMQTQHNDRLLS-AIRYAL-LGGKKIRSFLVTECASLFNV 67 ++++ T +DD L++ A H + + D L RY L GGK++R L A L Sbjct: 22 EARQVATAVDDGLALVEEALHREVRFADNLADVTTRYLLEAGGKRVRPMLTLLTAQLGKG 81 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N L+ A+E H SL HDD+ MD+ +RRG PT + A++ G+ L A Sbjct: 82 NTPEVLQAAQAVEITHLASLYHDDV--MDDSQMRRGVPTAQFVWGNSVAVLTGDLLFARA 139 Query: 128 FEIISS---PKTQLKDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 +++SS QL+ + +L L H IG Q D +D +V + Sbjct: 140 SKLVSSLGERAIQLQADTFERLCLGQLHETIGPQ--------DGEDAVAHYIRVL---ED 188 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTG+L+ A + G + + A + +E + FGE +G+ FQL DD++D Sbjct: 189 KTGSLIAVAAQMGIVFSGADSSYEEPVVTFGEKIGVAFQLIDDVID 234 >gi|166154843|ref|YP_001654961.1| dimethylallyltransferase [Chlamydia trachomatis 434/Bu] gi|166155718|ref|YP_001653973.1| dimethylallyltransferase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336124|ref|ZP_07224368.1| dimethylallyltransferase [Chlamydia trachomatis L2tet1] gi|165930831|emb|CAP04329.1| dimethylallyltransferase [Chlamydia trachomatis 434/Bu] gi|165931706|emb|CAP07283.1| dimethylallyltransferase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 291 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 101/205 (49%), Gaps = 11/205 (5%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I YALLGG K++R LV A + L AIE IH +LI DDLP MD+ Sbjct: 29 LRDPIEYALLGGGKRVRPLLVGLFAEGIH-KERDVLDTAIAIEYIHTSTLIADDLPCMDD 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK---------DNIRSQLML 148 +RRGKP+VH +DE +A++A L+ A+ I LK + ++ Sbjct: 88 DDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKAVVSCEQDVEEAYEDILE 147 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + G+ G+LGGQ D+ + V I K KTGAL AC SG + + Sbjct: 148 LIELRFGVGGILGGQYEDVFFHDFSKENVLGIIKKKTGALFEIACVSGWLFGGGERESST 207 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 + F E+ G++FQ+ DDL D +D Sbjct: 208 LVAEFAEHFGLLFQIRDDLADLSQD 232 >gi|162448856|ref|YP_001611223.1| farnesyltranstransferase [Sorangium cellulosum 'So ce 56'] gi|161159438|emb|CAN90743.1| Farnesyltranstransferase [Sorangium cellulosum 'So ce 56'] Length = 303 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 16/200 (8%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMD 96 LL+A ++A+ GG +IR L AS + A AA +E IHC SL+HDDLP D Sbjct: 27 LLAATQHAVFPGGARIRPRLCLAVASAYGDPAPEAADAAAAAVELIHCASLVHDDLPCFD 86 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRS-QLMLSL 150 + IRRG+P+VH + E A++AG+ L+ AFE ++ + + + D R+ + L Sbjct: 87 DAPIRRGRPSVHRAFGEPIAVLAGDQLIVLAFEALARGAFHAMASGVTDARRAVRFFEVL 146 Query: 151 THNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 +G+ QG++ GQ + + + + ++ KTGAL A GA+ A + Sbjct: 147 GGGVGMPQGIIAGQAWESE----AKVPLSAYRRAKTGALFEAAATLGALSAG---QDGAA 199 Query: 210 LRCFGENLGIIFQLADDLLD 229 G+ +G +Q+ADD+LD Sbjct: 200 WGDLGQRIGEAYQVADDVLD 219 >gi|329767036|ref|ZP_08258564.1| hypothetical protein HMPREF0428_00261 [Gemella haemolysans M341] gi|328837761|gb|EGF87386.1| hypothetical protein HMPREF0428_00261 [Gemella haemolysans M341] Length = 170 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L +I Y+L+ GKKIR + V++ + AIE +H YSL+HDDLP M Sbjct: 30 DILKESITYSLVNDGKKIRPLSFLYLLKYYEVDYTNYFDIALAIELVHTYSLVHDDLPEM 89 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN R GK T H + + A++ G+ +LT AFE++S ++ +K +++ +L+ + G Sbjct: 90 DNDDYRWGKLTNHKVFGQDLAVLTGDAMLTLAFEVLS--ESNVKSDLKVRLIKQFANYSG 147 Query: 156 LQGMLGGQMLDIQ 168 GM+ GQ+ D++ Sbjct: 148 AMGMIAGQVYDVK 160 >gi|222475573|ref|YP_002563990.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Florida] gi|255003563|ref|ZP_05278527.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Puerto Rico] gi|222419711|gb|ACM49734.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Florida] Length = 327 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 10/184 (5%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK+IR L+ + + +R+ AAIE IH +L+HDD+ +D +RRG T Sbjct: 47 LSGGKRIRPILLLAVCKMLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKT 104 Query: 107 VHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + + +I+ G+ LL AF+ I+S +L + + I Q M+ + L Sbjct: 105 SNSLWGNKASILVGDFLLAAAFQWIVSCGNFELLTVLSGASRTIVAGEI--QQMVYSKNL 162 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 DI E + I KT AL CES +++ + +E LR FG N GI FQ+ D Sbjct: 163 DITRE-----KYIEIISAKTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVD 217 Query: 226 DLLD 229 DLLD Sbjct: 218 DLLD 221 >gi|298346132|ref|YP_003718819.1| putative trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 43063] gi|304390108|ref|ZP_07372062.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657365|ref|ZP_07910247.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236193|gb|ADI67325.1| possible trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 43063] gi|304326590|gb|EFL93834.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491837|gb|EFU81446.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 350 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 22/220 (10%) Query: 20 LDDL--LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV-- 75 LDD+ +L + Q + L+S +R A GGK++R L + L N + +V Sbjct: 32 LDDIEQMLVQETQTQREKTSALVSHLRAA--GGKRMRPLLTLLVSQLGAPNQPVSSQVKQ 89 Query: 76 -GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E H SL HDDL MD +RRG P H+Q++ A++AG+ + + A ++S Sbjct: 90 GAVAVELTHLASLYHDDL--MDEATMRRGVPAAHVQWNNTLAVMAGDLIFSRASLLVSG- 146 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM-IQKMKTGALMCF 191 L I +Q H+ + + GQM DI D D + ++ + + KTGAL+ Sbjct: 147 ---LNPTIVAQ------HSRTFERLCQGQMRDIFGPDSHDDPIEFYIDVLRDKTGALIGC 197 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A GA ++ + FGE+LG+ FQ+ADD+LD + Sbjct: 198 AALYGAELSGCDAATVSAVTQFGEDLGVAFQIADDVLDLQ 237 >gi|297736851|emb|CBI26052.3| unnamed protein product [Vitis vinifera] Length = 254 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 38/192 (19%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+RY+LL GGK+I + L TA+ V A+E +H SL+ DDLP MDN I Sbjct: 27 AMRYSLLDGGKRIHPIVCISACELVGGQESTAMPVVCAVEMLHVVSLMQDDLPCMDNDDI 86 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKP+ H + E L +IG QG++ Sbjct: 87 RRGKPSNHKAFGES----------------------------------ELARSIGSQGLV 112 Query: 161 GGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ LD+ E E + ++ + K G L+ + GA++ S + E LR FG + Sbjct: 113 AGQFLDLSSEGSPEIGLEGLESIHINKAGPLLEASAVIGAMLGGGSSEQMEILRKFGRCV 172 Query: 218 GIIFQLADDLLD 229 G+++Q+ DD+LD Sbjct: 173 GLLYQVVDDILD 184 >gi|191638624|ref|YP_001987790.1| Farnesyl-diphosphate synthase [Lactobacillus casei BL23] gi|190712926|emb|CAQ66932.1| Farnesyl-diphosphate synthase [Lactobacillus casei BL23] Length = 280 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 115/199 (57%), Gaps = 9/199 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L +A+ Y++ GGK++R L+ ++++ AL AA+E +H YSLIHDDLP+ Sbjct: 22 NPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALEYVHTYSLIHDDLPA 81 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRGKPT H Q+ E AI+AG+ LLT AF I+S Q ++ + + + L Sbjct: 82 MDDDDLRRGKPTNHKQFGEALAILAGDALLTDAFAILSR---QYREKGAACVQI-LAEAA 137 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQ+LD+ E ++ + +++M KTGAL+ A G + + ++ L Sbjct: 138 GSNGMVGGQVLDMDGEN-EQYHLETLKRMHEAKTGALIQAAIAMGGLFVTIPETDQTALA 196 Query: 212 CFGENLGIIFQLADDLLDC 230 F G+ FQ+ DD+ D Sbjct: 197 DFSAAFGLGFQIKDDINDV 215 >gi|158523240|ref|YP_001531110.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3] gi|158512066|gb|ABW69033.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3] Length = 327 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 23/237 (9%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 + G + S++ + + I+T L D L T + D++ + L GGK++R L+ Sbjct: 5 LRGYIFSRVAGDMEAIETALADNL--------TPYFDKVREIAGHILFTGGKRVRPLLMV 56 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 CA L + RV E +H +L+HDD+ +D +RRG P H+ +D +A++ Sbjct: 57 LCARLCRYDGSDDKRVSVMFEYLHTATLLHDDI--VDGAAMRRGSPAAHVVWDPASAVLV 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176 G+ LL + I D R LM L L+ M G++ + + + E + Sbjct: 115 GDFLLARSASIAV-------DTGRIALMKILADI--LEDMSQGEIHQLARKGNVNLSEAE 165 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I KT LM AC SGAI+A AS L +G NLG+ FQ+ DDLLD D Sbjct: 166 YRTIILHKTAVLMEGACRSGAILAGASDAHARALADYGRNLGMAFQMIDDLLDYTAD 222 >gi|307323924|ref|ZP_07603133.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306890373|gb|EFN21350.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 342 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 19/223 (8%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +LLL+ +RL RYALL GK +R L+ E A + ++E Sbjct: 23 ELLLRELDRRWPPEAERLHQISRYALLPAGKLLRPLLLMESAEAVGGGGPAVVPAALSVE 82 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS------- 133 +H SL+HDD+ +D RRG+P+V +Y AI+ G+ L+ F +++ Sbjct: 83 YLHVGSLVHDDV--IDGDATRRGRPSVVARYGTADAIVTGDALMLGMFGVLTDGAEEAGG 140 Query: 134 -PKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 P ++ +R ++ + L ++G L G + D ++ + +KTGAL Sbjct: 141 LPPGRVLGAVRVFARAGVDLCRGQSMEGELRGDLGCGLDRYL------TMSSLKTGALFR 194 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 AC GAI+ S ++ L + E+LG+ FQ+ DDLL D Sbjct: 195 AACRGGAILGGGSPAQQHALTAYAEHLGLAFQMHDDLLPYTSD 237 >gi|91205532|ref|YP_537887.1| octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C] gi|91069076|gb|ABE04798.1| Octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C] Length = 334 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 105/183 (57%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L A +F+ N + +++ +A+E IH +L+HDD+ +D+ +RR KPT + Sbjct: 51 GGKRIRPLLTIITAKMFDYNGDSHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLD 166 + + T+I+ G+ L + +F+++ + + N+ ++ ++S + L + ++++ Sbjct: 109 VIWGSKTSILVGDFLFSQSFKLMVASGSIKAMNVLAKASAIISEGEVVQLVKLNERRLIN 168 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 I+ E Q I K KT L +C GAI+A+ S + + + FG+ LG IFQ+ DD Sbjct: 169 IE-----EYQ--QIVKSKTAELFGASCSVGAIIANQSDDISKNMEEFGKLLGTIFQVIDD 221 Query: 227 LLD 229 LLD Sbjct: 222 LLD 224 >gi|73671769|gb|AAZ80290.1| farnesyl diphosphate synthase [Vibrio sp. JL-73] Length = 147 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 12/151 (7%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLM 147 HDDLP MD+ +RRG+ T HI +DE +AI+AG+ L T AF I++ K + +I R ++ Sbjct: 1 HDDLPGMDDDSLRRGQATCHIAFDEASAILAGDALQTLAFGILAEGKLSAEGDIYRIHMV 60 Query: 148 LSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 L G GM GQ LD+ E +D + I + KTGAL+ A GA A Sbjct: 61 KELAAASGAMGMCLGQALDLAAEGKRVDLEALETIHRNKTGALIRCAVRLGAYAA----G 116 Query: 206 EK-----ERLRCFGENLGIIFQLADDLLDCE 231 EK +RL F +G+ FQ+ DD+LD E Sbjct: 117 EKGVACLKRLDTFSNAIGLAFQVQDDILDVE 147 >gi|308080718|ref|NP_001183942.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays] gi|148535925|gb|ABQ85649.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays] Length = 343 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 15/224 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70 +++ D+ + + M Q + + A+RYA+L G K+ L L Sbjct: 47 SLIADVESELDAAMPMQPPESIHYAMRYAVLPGAGKEGAAKRAPPVLCVAACELLGAPRA 106 Query: 71 TALRVGAAIECIHCYSLI--HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AL AA+E +H SL+ HDDLP D RRG+P+ H Y A++AG+ L A+ Sbjct: 107 AALPAAAALEMLHAASLVLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAY 166 Query: 129 EIISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKM 183 + S T D + ++L L +G GM GQ LD+ + E +V + Sbjct: 167 THVIS-HTPSPDPVPHAVLLRVLAELARAVGSTGMAAGQFLDLAGATALGEAEVMQVLTK 225 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 K G + + GA++ A +E+ LR +G +G++++L DD+ Sbjct: 226 KFGEMAECSAACGAMLGGAGPDEEAELRRYGRTIGVLYELVDDI 269 >gi|218530905|ref|YP_002421721.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4] gi|218523208|gb|ACK83793.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4] Length = 288 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 14/219 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECA-SLFNVNHL 70 +RI+T+LD + SH + LL+ AIRYA+ GG +IR L A + + + Sbjct: 5 RRIETVLDIAV----SHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPA 60 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T+ AAIE +HC SL+HDDLP D+ +RR KP+VH + A++ G+ L+ AFE Sbjct: 61 TSEAAAAAIELLHCASLVHDDLPCFDDAAMRRQKPSVHAAFGVPLAVLTGDALIVAAFET 120 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 ++ T + + L G++ GQ + + ++D + Q+ KTGAL Sbjct: 121 LARGVTCSPTRLAGLVGLIARAAGSPSGIVAGQAWE-SEPYVDLVE---YQQAKTGALF- 175 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A A+ R GE LG +Q+ADDL D Sbjct: 176 --AAATVAGAAAAGAPPLPWRLLGECLGAAYQVADDLRD 212 >gi|254995376|ref|ZP_05277566.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Mississippi] gi|255004689|ref|ZP_05279490.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Virginia] Length = 327 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 10/184 (5%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK+IR L+ + + +R+ AAIE IH +L+HDD+ +D +RRG T Sbjct: 47 LSGGKRIRPILLLAVCKMLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKT 104 Query: 107 VHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + + +I+ G+ LL AF+ I+S +L + + I Q M+ + L Sbjct: 105 SNSLWGNKASILVGDFLLAAAFQWIVSCGNFELLTVLSGASRTIVAGEI--QQMVYSKNL 162 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 DI E + I KT AL CES +++ + +E LR FG N GI FQ+ D Sbjct: 163 DITRE-----KYIEIISAKTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVD 217 Query: 226 DLLD 229 DLLD Sbjct: 218 DLLD 221 >gi|56417209|ref|YP_154283.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St. Maries] gi|56388441|gb|AAV87028.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St. Maries] Length = 327 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 10/184 (5%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK+IR L+ + + +R+ AAIE IH +L+HDD+ +D +RRG T Sbjct: 47 LSGGKRIRPILLLAVCKMLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKT 104 Query: 107 VHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + + +I+ G+ LL AF+ I+S +L + + I Q M+ + L Sbjct: 105 SNSLWGNKASILVGDFLLAAAFQWIVSCGNFELLTVLSGASRTIVAGEI--QQMVYSKNL 162 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 DI E + I KT AL CES +++ + +E LR FG N GI FQ+ D Sbjct: 163 DITRE-----KYIEIISAKTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVD 217 Query: 226 DLLD 229 DLLD Sbjct: 218 DLLD 221 >gi|189463880|ref|ZP_03012665.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM 17393] gi|189438453|gb|EDV07438.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM 17393] Length = 324 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 116/219 (52%), Gaps = 20/219 (9%) Query: 22 DLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLTALR 74 +LL + SH+ T+ L + + Y L +GGK+IR L+ +L+ +V + A Sbjct: 6 ELLEKINSHITDLQFTRTPKGLYAPVEYVLSMGGKRIRPVLMLMAYNLYQEDVTRIYAPA 65 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +G IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A++ ++ Sbjct: 66 IG--IEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLILAYQFMAEC 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFMIQKMKTGALMCF 191 + + SLT L+ G QM + +++ E + MI ++KT L+ Sbjct: 122 SPSFLKEVMD--LFSLT---ALEICEGQQMDMEFEQRNDVAAEEYLEMI-RLKTAVLLAA 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + GA + AS + +RL FG +G+ FQL DDLLD Sbjct: 176 SLRIGARLGGASVEDADRLYDFGMQIGVAFQLKDDLLDV 214 >gi|332361748|gb|EGJ39552.1| geranyltranstransferase [Streptococcus sanguinis SK1056] Length = 291 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 5/185 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR L+ E F + A +V +A+E IH SLIHDDLP+MD+ RRG+ T Sbjct: 38 GGKRIRPLLLLELIQAFGLELAEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H ++ E AI+AG+ L + +++ + +L ++ L+ L+ G GM+ GQ+LD+ Sbjct: 98 HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155 Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E I + I KTG L+ + + ++A +++LR GE LG+ FQ+ D Sbjct: 156 QGEGQAISLEDLKTIHANKTGKLLMYPFVAAGLIAEVEYFVQDKLRRIGELLGLAFQVRD 215 Query: 226 DLLDC 230 D+LD Sbjct: 216 DILDV 220 >gi|313619081|gb|EFR90887.1| geranyltranstransferase [Listeria innocua FSL S4-378] Length = 188 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 3/147 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV N+ + L+ A+E IH YSLIHDDLP+MD+ RRGK T H Sbjct: 43 GGKRIRPMLVFATLQALNIEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKWTNH 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y + TAI+AG+ LLT AF I++ + L R L+ ++++ G +GM+GGQ D++ Sbjct: 103 KIYGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISYSSGAEGMVGGQQADME 161 Query: 169 DEFIDET--QVFMIQKMKTGALMCFAC 193 E T ++ I KTG L+ FA Sbjct: 162 AENKQVTLEELASIHARKTGELLIFAV 188 >gi|21673095|ref|NP_661160.1| isoprenyl synthetase [Chlorobium tepidum TLS] gi|21646167|gb|AAM71502.1| isoprenyl synthetase [Chlorobium tepidum TLS] Length = 332 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 22/200 (11%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L RY L G GK+IR FL A + AL V IE +H ++L+HDD+ MD Sbjct: 37 LYDPARYILEGKGKRIRPFLTLLAAEAVSGKSDNALGVALGIEVLHNFTLMHDDI--MDQ 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI----ISSPKTQLKDNIRSQLMLSLTHN 153 +R G+PTVH Q++ AI++G+ ++ YA+E+ ISS R ++ + ++ Sbjct: 95 ADLRHGRPTVHKQWNVNAAILSGDMMIAYAYELALKAISS---------RHAEIIHIFND 145 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKER 209 + + GQ LD++ E + + MI K KTG L+ A E+G + + + Sbjct: 146 ANIT-ICEGQALDMELEQRKDVTIADYLDMISK-KTGRLISAALEAGGVAGDGTPEQIAA 203 Query: 210 LRCFGENLGIIFQLADDLLD 229 L FGE +G FQ+ DD LD Sbjct: 204 LVTFGEKIGRAFQIQDDYLD 223 >gi|313675607|ref|YP_004053603.1| polyprenyl synthetase [Marivirga tractuosa DSM 4126] gi|312942305|gb|ADR21495.1| Polyprenyl synthetase [Marivirga tractuosa DSM 4126] Length = 326 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 15/205 (7%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L IRY + LGGK++R L L+ N + A+E H ++L+HDD+ MD Sbjct: 27 ELYEPIRYIMSLGGKRMRPLLSLLSYQLYKDNIKEVIPASIAVEIFHNFTLMHDDI--MD 84 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSLTHNI 154 N +RRG+ TVH +++ AI++G+ +L A++ I +SP +L + +L + Sbjct: 85 NAPLRRGQQTVHEKWNSPVAILSGDVMLVKAYQQLIANSPTEKLTE------ILEKFNRC 138 Query: 155 GLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 ++ + GQ +D+ + E + E + ++KT L+ F+ E G I+A ++ ++ L Sbjct: 139 AIE-VCEGQQIDMNFEEQEQVQEADYIEMIRLKTAVLLGFSLEFGGILAMDNEADQALLY 197 Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236 G N GI FQL DDLLD D K Sbjct: 198 QMGVNAGIGFQLMDDLLDVYADQDK 222 >gi|17481248|dbj|BAB79206.1| farnesyl diphosphate synthase [Rhodovulum sp. CP-10] Length = 144 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 7/135 (5%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+PTVH+++D+ TA++ G+ L T AF++++ P +R L+ SL G+ GM Sbjct: 12 LRRGQPTVHVKWDDGTALLVGDALQTLAFDLLADPACHPDPGVRIDLVASLARASGIDGM 71 Query: 160 LGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + GQ DI E ++ +Q KTGAL+ ++ E+GA + A + L + Sbjct: 72 VLGQAQDIAAETAGRPLTLAEITELQANKTGALIRWSAEAGARLGRA---DIAPLSSYAT 128 Query: 216 NLGIIFQLADDLLDC 230 LG+ FQ+ADD+LD Sbjct: 129 ALGLAFQIADDILDA 143 >gi|116495118|ref|YP_806852.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC 334] gi|227534867|ref|ZP_03964916.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|116105268|gb|ABJ70410.1| farnesyl-diphosphate synthase [Lactobacillus casei ATCC 334] gi|227187623|gb|EEI67690.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 283 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 113/199 (56%), Gaps = 9/199 (4%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L +A+ Y++ GGK++R L+ ++++ AL AA+E +H YSLIHDDLP+ Sbjct: 25 NPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALEYVHTYSLIHDDLPA 84 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRGKPT H Q+ E AI+AG+ LLT AF I+S + K Q+ L Sbjct: 85 MDDDDLRRGKPTNHKQFGEALAILAGDALLTDAFAILSREYPE-KGAACVQI---LAEAA 140 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQ+LD+ E ++ + +++M KTGAL+ A G + + ++ L Sbjct: 141 GSNGMVGGQVLDMDGEN-EQYHLETLKRMHEAKTGALIQAAIAMGGLFVTIPETDQTALA 199 Query: 212 CFGENLGIIFQLADDLLDC 230 F G+ FQ+ DD+ D Sbjct: 200 DFSAAFGLGFQIKDDINDV 218 >gi|217978204|ref|YP_002362351.1| Polyprenyl synthetase [Methylocella silvestris BL2] gi|217503580|gb|ACK50989.1| Polyprenyl synthetase [Methylocella silvestris BL2] Length = 289 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 101/195 (51%), Gaps = 11/195 (5%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSM 95 RL +AIRYA+ GG +IR L ++ +L A A IE +HC SL HDDLP Sbjct: 26 RLAAAIRYAIFPGGARIRPRLCLAVSAACGAQNLGASAAAAGAIELLHCASLAHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ RRGKP+VH + E A++AG+ ++ AFE I+ + ++ L+ ++ G Sbjct: 86 DDAPTRRGKPSVHAAFGEALAVLAGDAMIVMAFEAIAR-AFMDRPHLLPPLVQTIARAAG 144 Query: 156 L-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + G+ GQ + + + Q+ KTG+L A +GA+ A A R G Sbjct: 145 MPSGIAAGQGYESEPQLARS----QYQRAKTGSLFVAATVAGALAAGADGAP---WRMLG 197 Query: 215 ENLGIIFQLADDLLD 229 E LG +Q+ADD+ D Sbjct: 198 EGLGEAYQIADDIRD 212 >gi|304321788|ref|YP_003855431.1| geranylgeranyl pyrophosphate synthase [Parvularcula bermudensis HTCC2503] gi|303300690|gb|ADM10289.1| geranylgeranyl pyrophosphate synthase [Parvularcula bermudensis HTCC2503] Length = 316 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 5/182 (2%) Query: 42 AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A R++LL GK+IR+ L A + AL A+E IH SL+ DDLP+MD+ + Sbjct: 48 AARHSLLAPGKRIRAVLTLLAARECGGSLERALDTACAVEMIHTASLVIDDLPAMDDADL 107 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG+PT H + E TAI+A GLL A+ ++ + + L ++++ L+ +G +G++ Sbjct: 108 RRGRPTCHRAFGESTAILAAIGLLNGAYGVVMAAE-PLSAAEKTKIASILSSAVGWRGLV 166 Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 GQ LD+ T + IQ KTG L A +G A + L F LG Sbjct: 167 QGQALDLNP---GTTSLETIQDGKTGVLFEAAVLAGEQTAGWVSEKSVALAAFATALGRA 223 Query: 221 FQ 222 +Q Sbjct: 224 YQ 225 >gi|222085054|ref|YP_002543583.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter K84] gi|221722502|gb|ACM25658.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter K84] Length = 455 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L+N +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 174 GGKRLRPMLTIASAALYNYQGDNHIKLATSVEFLHTATLLHDDV--VDESDLRRGKSTAR 231 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 232 MIWGNQASVLVGDFLLGQAFRMMVEVGSLEALDVLSSAACVIAEGEVLQLSVSKNMETTE 291 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A+A + E+ L+ +G NLG+ FQL DD L Sbjct: 292 DDYLS------VIRAKTAALFSAAAEVGPIVANAGKAERNALKSYGTNLGLAFQLVDDAL 345 Query: 229 D 229 D Sbjct: 346 D 346 >gi|288560181|ref|YP_003423667.1| bifunctional short chain isoprenyl diphosphate synthase IdsA [Methanobrevibacter ruminantium M1] gi|288542891|gb|ADC46775.1| bifunctional short chain isoprenyl diphosphate synthase IdsA [Methanobrevibacter ruminantium M1] Length = 331 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 100/194 (51%), Gaps = 9/194 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L N AL+ AAIE IH +SLIH MD+ +RRG P+VH Sbjct: 42 GGKMLRPALTLISCEAVGGNKEDALKTAAAIELIHTFSLIH--DDIMDDDDMRRGMPSVH 99 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +DE AI+AG+ L + AFE+I S K + L+ + ++ + GQ D+ Sbjct: 100 KVWDEPLAILAGDTLFSKAFEMIISSKEENAHPEHVANALATVADACVK-ICEGQASDMS 158 Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + E + + KTGAL+ A ++GAIM A + E L +G +GI FQ+ D Sbjct: 159 FEGDFDVKEAEYSEMIYKKTGALIAAATKAGAIMGGADEKEVTALYEYGRMIGIAFQIQD 218 Query: 226 DLLDC---EEDLPK 236 D LD E+DL K Sbjct: 219 DYLDVISDEKDLGK 232 >gi|148244594|ref|YP_001219288.1| geranyltranstransferase [Candidatus Vesicomyosocius okutanii HA] gi|146326421|dbj|BAF61564.1| geranyltranstransferase [Candidatus Vesicomyosocius okutanii HA] Length = 284 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 9/198 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMD 96 L A+RY+ L GK+ R L A++F+ HL + + AIE IH YSLIHDDLP+MD Sbjct: 24 LTKAMRYSTLTNGKRFRPILTYSVANIFST-HLDLVDSSSCAIEFIHAYSLIHDDLPAMD 82 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + IR +PT H + E AI+ G+GL T AF+++ + + + + +L+ SLTH Sbjct: 83 DDDIRHNQPTCHKLFGEAQAILVGDGLQTLAFKVLVNDNL-IGSDTKIELIKSLTH--AS 139 Query: 157 QGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRCF 213 M GQ +D I + ++ T + + + KTGAL+ A GAI++ N+ + L F Sbjct: 140 FEMAEGQAIDLSIIAKQVNITTLETMHRKKTGALLNCAVNLGAIVSKNCNNKDQTILNIF 199 Query: 214 GENLGIIFQLADDLLDCE 231 +++G+ +Q+ DD+LD E Sbjct: 200 SKDIGLAYQIQDDVLDIE 217 >gi|119384763|ref|YP_915819.1| trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222] gi|119374530|gb|ABL70123.1| Trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222] Length = 333 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 9/201 (4%) Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 M ++H R+ + + GGK++R LV A L + + + AA+E IH +L+ Sbjct: 32 RMASRHAPRIPEVTAHLVEAGGKRLRPMLVLAAARLCGYAGESHILLAAAVEFIHTATLL 91 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D RRG+PT ++ +D ++++ G+ L +F++++ ++ I + Sbjct: 92 HDDV--VDESQQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMADTESMQVMRILANASA 149 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 ++ LQ + QD E I + KT AL A E+GA++A A + Sbjct: 150 TIAEGEVLQ------LTAAQDVSTTEDTYIQIVRGKTAALFSAATEAGAVVAGADPAVQR 203 Query: 209 RLRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 204 ALFDYGDALGIAFQIVDDLLD 224 >gi|85703528|ref|ZP_01034632.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. 217] gi|85672456|gb|EAQ27313.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. 217] Length = 289 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 13/201 (6%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDD 91 Q RL A+ YA GG +IR ++ A + + AA+E +HC SL+HDD Sbjct: 22 QTPARLADALDYATSPGGARIRPTILMSVAMACGDDRPDLSDAAAAALEIMHCASLVHDD 81 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSL 150 LP D+ +RRGK +VH Y E A++ G+ L+ +FEI++ + D R+ L+L+L Sbjct: 82 LPCFDDADLRRGKASVHRAYSEPLAVLTGDALIIMSFEILA--RVAHHDAGRATALILAL 139 Query: 151 THNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G+ G+ GQ + + + E + KTGAL A + GAI A+ +E E Sbjct: 140 ARRSGMPNGICAGQGWESEPKVDLEA----YHRSKTGALFIAATQMGAI---AAGHEPEP 192 Query: 210 LRCFGENLGIIFQLADDLLDC 230 G +G FQ+ADDL D Sbjct: 193 WYELGARIGAAFQVADDLRDA 213 >gi|327440778|dbj|BAK17143.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris StLB046] Length = 324 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 109/208 (52%), Gaps = 20/208 (9%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 L ++SH+ + LL A GGK+IR A + N + +E IH Sbjct: 28 LNSSSHLLNDASVHLLQA------GGKRIRPVFTLLSAKFGDYNIDRMKNIAVPLELIHM 81 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 SL+HDD+ +DN +RRG+ TV Q++ A+ GN + A + ++S +N R+ Sbjct: 82 GSLVHDDV--IDNSDMRRGRETVKAQWNNRVAMYTGNFIFARALQYVTSI-----ENPRA 134 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF-IDET--QVFMIQKMKTGALMCFACESGAIMAH 201 +L+ T + ++ G+++ I+D+F +D++ F K KT L+ +CE GA+++ Sbjct: 135 HQILAKT----MVELVNGEVIQIEDKFRLDQSLKDYFRRIKRKTALLIESSCELGAVVSG 190 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229 A + L+ +G +G+ FQ+ DD+LD Sbjct: 191 ADEKTARHLKRYGYFVGMSFQIVDDILD 218 >gi|167754003|ref|ZP_02426130.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216] gi|167658628|gb|EDS02758.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216] Length = 337 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 14/201 (6%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL + I Y+L + GK++R L+ +F+ A+ AA+E H ++L+HDD+ MD Sbjct: 40 RLYAPISYSLTMSGKRLRPMLLMLTCGIFSDQPQAAMPAAAAVEVFHNFTLLHDDI--MD 97 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG P+V ++ + AI++G+ +L A+ ++S Q+ I L+ + + + Sbjct: 98 NAAMRRGNPSVFAKWGQNVAILSGDAMLISAYRLLSEYPPQVLPQI-----LARFNTMAI 152 Query: 157 QGMLGGQMLDIQDEFIDETQV----FMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 + + GQ D+ E + V MI+ +KT AL+ A GAI+ A + + +RL Sbjct: 153 E-VCEGQQYDMDFETRESVSVEEYLHMIE-LKTSALLSGATVIGAIIGGAGEEDCQRLYR 210 Query: 213 FGENLGIIFQLADDLLDCEED 233 F LG+ FQL DDLLD D Sbjct: 211 FATELGLAFQLQDDLLDSYGD 231 >gi|157964658|ref|YP_001499482.1| octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5] gi|157844434|gb|ABV84935.1| Octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5] Length = 363 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 125/227 (55%), Gaps = 20/227 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65 K+Q++ K T L++L++ + ++ L+ + LL GGK+IR L A +F Sbjct: 42 KIQQDLKDAVTKLNNLIISC-----LKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 96 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + Sbjct: 97 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 154 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182 +F+++ + + I++ +L+ I +G + Q++ + + IDE Q I K Sbjct: 155 QSFKLMVASGS-----IKAMNVLAKASAIISEGEVV-QLVKLNERRIITIDEYQ--QIVK 206 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L ACE GAI+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 207 SKTAELFGAACEVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLD 253 >gi|258406530|ref|YP_003199272.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692] gi|257798757|gb|ACV69694.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692] Length = 322 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 28/213 (13%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 LD L++ ASH+ L A GGK++R L A F + A+ Sbjct: 26 LDPLIVPVASHV--------LGA------GGKRLRPILCVLTAEAFGYRDKEVYPLATAL 71 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H +LIHDD+ +D +RRG+P+ H+ + ++AG+ LL A + I+ Sbjct: 72 ELLHSATLIHDDI--LDGAALRRGQPSAHLAFGVQETVLAGDALLAMANKCIAGYGQPEL 129 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESG 196 I S+ +++ + G++++I ++ + E F I KT L+ +CE G Sbjct: 130 MRIASEAIMATAN---------GEIMEIAQLREPRLSEEDYFQIITGKTAVLIQASCECG 180 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++A A +++ + G NLGI FQL DD LD Sbjct: 181 AVLAGAKGPQRQAAQDLGRNLGIAFQLVDDALD 213 >gi|198276974|ref|ZP_03209505.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135] gi|198270499|gb|EDY94769.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135] Length = 327 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 13/200 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I Y L LGGK++R L+ +L+ + A IE H ++L+HDDL MD Sbjct: 29 LYDPIEYVLGLGGKRLRPVLMLLAYNLYKEDVTRIFSQAAGIETYHNFTLLHDDL--MDK 86 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGL--LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 +RR KPTVH ++DE TAI++G+ + L Y F + P ++ + +L G Sbjct: 87 ADMRRNKPTVHKKWDENTAILSGDAMLILAYQFMMKECPLECVERVMEVFGRTALEVCEG 146 Query: 156 LQG-MLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 Q M LD+ DE+I+ MI ++KT L+ A + GAI+ A + + + L F Sbjct: 147 QQWDMEFEHRLDVTVDEYIE-----MI-RLKTSVLLAAALKIGAILGGAPEKDAQLLYDF 200 Query: 214 GENLGIIFQLADDLLDCEED 233 G +G+ FQL DD LD D Sbjct: 201 GIKMGLAFQLQDDYLDVYGD 220 >gi|126726042|ref|ZP_01741884.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium HTCC2150] gi|126705246|gb|EBA04337.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium HTCC2150] Length = 332 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + M ++H R+ + + GGK+IR + A + + + + A +E IH +L Sbjct: 31 ARMASEHAPRIPEVTAHLVEAGGKRIRPMMTLAAAKMCGYDGPYHINLAATVEFIHTATL 90 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D RRG+ T ++ +D ++I+ G+ L AF+++ ++ +I S Sbjct: 91 LHDDV--VDESSQRRGRATANLLWDNKSSILVGDYLFARAFQLMVEAESLTVLDILSNAS 148 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 ++ LQ M QD DE + + KT AL A E G ++A+A Sbjct: 149 ATIAEGEVLQ------MTAAQDLETDEATYLKVVRGKTAALFSAATEVGGVIANAPAEHT 202 Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDL 234 + L FG+ LGI FQ+ DDLLD + L Sbjct: 203 KALFDFGDALGISFQIVDDLLDYDGSL 229 >gi|197121567|ref|YP_002133518.1| polyprenyl synthetase [Anaeromyxobacter sp. K] gi|196171416|gb|ACG72389.1| Polyprenyl synthetase [Anaeromyxobacter sp. K] Length = 293 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 109/203 (53%), Gaps = 17/203 (8%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLP 93 RL+ A+RYALLGG K++R LV + A+R A+E IH YSL+HDDLP Sbjct: 36 RLVEAMRYALLGGGKRMRPALVLAACEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLP 95 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG+PTVH YDE TA++ G+GL + AF +++SP D + L L Sbjct: 96 AMDDDDLRRGRPTVHKAYDEPTAVLVGDGLQSLAFAHLLASP-----DPAAAPLARLLAE 150 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 N L M+ GQ D+ E + E +V + + KT + A A + E + Sbjct: 151 NAQL--MVEGQARDMAGEHARLGEAEVMELMRTKT---GALLAAAVAGGARCAGVPVEAV 205 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 G LG+ FQ+ADDLLD D Sbjct: 206 YPVGLKLGLAFQIADDLLDLTAD 228 >gi|242373777|ref|ZP_04819351.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis M23864:W1] gi|242348514|gb|EES40116.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis M23864:W1] Length = 332 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 26/207 (12%) Query: 34 QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLI 88 + +D+ L + LL GGK++R V +S F + T+ RV A+E IH +L+ Sbjct: 35 KSSDQTLEDAAFHLLSSGGKRVRPVFVI-LSSQFGDSKDTSENTYRVAVALELIHMATLV 93 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D RRG+PT+ ++D+ TAI+ GN LL + +S ++KD Sbjct: 94 HDDV--IDKSDKRRGRPTISKKWDQTTAILTGNFLLALGLQHLS----EIKD-------- 139 Query: 149 SLTHNIGLQGML---GGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHA 202 S HNI + ++ G++ QD+F D+ ++++ KT L+ A E GA+ ++A Sbjct: 140 SRVHNIISKSIVDVCKGELFQFQDQFNSDQNITNYLRRINRKTALLIQLATEVGALTSNA 199 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD 229 S +L+ G +G+ FQ+ DD+LD Sbjct: 200 SDEVVRKLKMIGHYIGMSFQIIDDVLD 226 >gi|70726445|ref|YP_253359.1| heptaprenyl diphosphate syntase component II [Staphylococcus haemolyticus JCSC1435] gi|68447169|dbj|BAE04753.1| heptaprenyl diphosphate syntase component II [Staphylococcus haemolyticus JCSC1435] Length = 318 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%) Query: 34 QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIH 89 + ND +L LL GGK++R V +S F T RV A+E IH +L+H Sbjct: 22 ESNDPILREASSHLLSSGGKRVRPAFVI-LSSQFGPQKKTEDTYRVAVALELIHMATLVH 80 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+ T+ ++D TAI+ GN LL E +S +++DN ++ + Sbjct: 81 DDV--IDKSDKRRGRLTIVKKWDVTTAILTGNFLLALGLEHLS----EIRDNRIHHIISN 134 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 N+GL G++ QD+F E T KT L+ A E GAI + A+ Sbjct: 135 SIVNVGL-----GELFQFQDQFNSEQSITNYLRRINRKTALLIQLATEVGAITSEANDET 189 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 +L+ G +G+ FQ+ DD+LD Sbjct: 190 IRKLKMIGHYIGMSFQIVDDILD 212 >gi|255027667|ref|ZP_05299653.1| hypothetical protein LmonocytFSL_17247 [Listeria monocytogenes FSL J2-003] Length = 129 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 1/96 (1%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL ++ Y++ GGK+IR LV VN L ++ A+E IH YSLIHDDLP+MD Sbjct: 31 RLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 N RRGK T H + + TAI+AG+ LLT AF I++ Sbjct: 91 NDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILA 126 >gi|325268320|ref|ZP_08134953.1| trans-hexaprenyltranstransferase [Prevotella multiformis DSM 16608] gi|324989462|gb|EGC21412.1| trans-hexaprenyltranstransferase [Prevotella multiformis DSM 16608] Length = 326 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK++R L+ A F L +E +H SL+HDD+ +D RRG+ +V+ Sbjct: 44 AGKRMRPILILLIAKNFGKVSEATLHAAVGLELLHTASLVHDDV--VDESAERRGQASVN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 YD A++ G+ +L+ A +S + S+ ++ +G Q + G++L Sbjct: 102 ADYDNKVAVLVGDYVLSTALLYVS--------HTHSEAIVRRLAGLG-QTLSDGEILQLS 152 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +IQ + I E + I + KT AL GA+ A AS+ E + RCFG+NLGI+FQ+ D Sbjct: 153 NIQRKDITEEAYYRIIERKTAALFEACAAIGAVSAGASEEEVDAARCFGKNLGIVFQIRD 212 Query: 226 DLLD 229 D+ D Sbjct: 213 DIFD 216 >gi|99078713|ref|YP_611971.1| farnesyltranstransferase [Ruegeria sp. TM1040] gi|99035851|gb|ABF62709.1| Farnesyltranstransferase [Ruegeria sp. TM1040] Length = 336 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M +QH R+ + + GGK++R L A + L++ A +E IH +L+H Sbjct: 36 MASQHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYEGEHHLKLAATVEFIHTATLLH 95 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L +F+++ + +I + + Sbjct: 96 DDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVDTGSLRVLDILANASAT 153 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ M D E + + KT AL A E G ++A AS+ + + Sbjct: 154 IAEGEVLQ------MTAATDLGTTEEIYLQVVRGKTAALFSAATEVGGVIAGASEAQVKA 207 Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236 L +G+ LGI FQ+ADDLLD + D K Sbjct: 208 LFDYGDALGIAFQIADDLLDYQGDTAK 234 >gi|304413337|ref|ZP_07394810.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola LSR1] gi|304284180|gb|EFL92573.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola LSR1] Length = 327 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 119/223 (53%), Gaps = 19/223 (8%) Query: 18 TILDDLLLQTASHMQTQHND---------RLLSAIRYALL--GGKKIRSFLVTECASLFN 66 +ILD++ TA M T ++ L++ I + ++ GGK+IR + A Sbjct: 6 SILDEVKELTAKDMATVNDTIEEQMRSDVALITEISHYIINNGGKRIRPMIAILVAQALG 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + IE IH +L+HDD+ +DN +RRGK TV+ Q+ +++ G+ + T Sbjct: 66 YKGNQHITIAVLIEFIHTATLLHDDV--VDNSDLRRGKATVNAQFGNAASVLVGDFIYTR 123 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ TQL ++R ++S N+ +G + Q+++ +D I E + KT Sbjct: 124 AFQMM----TQL-GSMRVLEVMSTATNMIAKGEVQ-QLINCKDPRITEENYLSVIGSKTA 177 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L A +S AI+A A++ ++ L+ +G ++GI FQL DDLLD Sbjct: 178 KLFEAASQSSAILAGANKEKELALQRYGHHIGIAFQLIDDLLD 220 >gi|148643503|ref|YP_001274016.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA [Methanobrevibacter smithii ATCC 35061] gi|148552520|gb|ABQ87648.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA [Methanobrevibacter smithii ATCC 35061] Length = 330 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 12/191 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L + + +L+ AAIE IH +SLIH MD+ +RRGKP VH Sbjct: 41 GGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIH--DDIMDDDDMRRGKPAVH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQML 165 +DE AI+AG+ L + AFEII S P+ N +QL +L T + GQ Sbjct: 99 KVWDENVAILAGDTLFSKAFEIIMNSDPEK----NTPTQLSQTLATVADACVKICEGQAS 154 Query: 166 DI--QDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D+ +D + + E + + KTGAL+ A ++GAIM A+Q + + +G +G+ FQ Sbjct: 155 DMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQ 214 Query: 223 LADDLLDCEED 233 + DD LD D Sbjct: 215 IQDDYLDLASD 225 >gi|170741854|ref|YP_001770509.1| polyprenyl synthetase [Methylobacterium sp. 4-46] gi|168196128|gb|ACA18075.1| Polyprenyl synthetase [Methylobacterium sp. 4-46] Length = 290 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 14/222 (6%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECA-SLFNV 67 ++ RI+ LD SH + LL+ AIRYA+ GG +IR L A + + Sbjct: 2 DDGGRIERALD----VAVSHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVARACGDD 57 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + AAIE +HC SL+HDDLP D+ +RR KP+VH+ + E A++AG+ L+ A Sbjct: 58 DPAASDAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHVAFGEPIALLAGDALIVLA 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 FE ++ ++ + + + + L G++ GQ + + + Q+ KTGA Sbjct: 118 FETLARGAARVPERLGTLVGLVARAVGSPAGIVAGQAWESE----PSVGLSAYQQAKTGA 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L A +GA A A R GE LG +Q+ADDL D Sbjct: 174 LFAAATVTGAAAAGAEAMP---WRLLGEYLGEAYQVADDLRD 212 >gi|288869706|ref|ZP_05975848.2| short chain isoprenyl diphosphate synthase [Methanobrevibacter smithii DSM 2374] gi|288861214|gb|EFC93512.1| short chain isoprenyl diphosphate synthase [Methanobrevibacter smithii DSM 2374] Length = 335 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 12/191 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L + + +L+ AAIE IH +SLIH MD+ +RRGKP VH Sbjct: 46 GGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIH--DDIMDDDDMRRGKPAVH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQML 165 +DE AI+AG+ L + AFEII S P+ N +QL +L T + GQ Sbjct: 104 KVWDENVAILAGDTLFSKAFEIIMNSDPEK----NTPAQLSQTLATVADACVKICEGQAS 159 Query: 166 DI--QDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D+ +D + + E + + KTGAL+ A ++GAIM A+Q + + +G +G+ FQ Sbjct: 160 DMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQ 219 Query: 223 LADDLLDCEED 233 + DD LD D Sbjct: 220 IQDDYLDLASD 230 >gi|222444999|ref|ZP_03607514.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii DSM 2375] gi|222434564|gb|EEE41729.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii DSM 2375] Length = 335 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 12/191 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L + + +L+ AAIE IH +SLIH MD+ +RRGKP VH Sbjct: 46 GGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIH--DDIMDDDDMRRGKPAVH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQML 165 +DE AI+AG+ L + AFEII S P+ N +QL +L T + GQ Sbjct: 104 KVWDENVAILAGDTLFSKAFEIIMNSDPEK----NTPTQLSQTLATVADACVKICEGQAS 159 Query: 166 DI--QDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D+ +D + + E + + KTGAL+ A ++GAIM A+Q + + +G +G+ FQ Sbjct: 160 DMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQ 219 Query: 223 LADDLLDCEED 233 + DD LD D Sbjct: 220 IQDDYLDLASD 230 >gi|86157523|ref|YP_464308.1| farnesyl-diphosphate synthase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774034|gb|ABC80871.1| farnesyl-diphosphate synthase [Anaeromyxobacter dehalogenans 2CP-C] Length = 293 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 108/203 (53%), Gaps = 17/203 (8%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLP 93 RL+ A RYALLGG K++R LV + A+R A+E IH YSL+HDDLP Sbjct: 36 RLVEATRYALLGGGKRMRPALVLAACEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLP 95 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG+PTVH +DE TA++ G+GL + AF +++SP D + L L Sbjct: 96 AMDDDDLRRGRPTVHRAFDEATAVLVGDGLQSLAFAHLLASP-----DPAAAPLARLLAE 150 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 N L M+ GQ D+ E + E +V + + KT + A A + E + Sbjct: 151 NAQL--MVEGQARDMAGEHARLGEAEVMELMRTKT---GALLAAAVAGGARCAGASAEAV 205 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 G LG+ FQ+ADDLLD D Sbjct: 206 YPVGLKLGLAFQIADDLLDLTAD 228 >gi|309320748|pdb|3P41|A Chain A, Crystal Structure Of Polyprenyl Synthetase From Pseudomonas Fluorescens Pf-5 Complexed With Magnesium And Isoprenyl Pyrophosphate Length = 303 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 5/201 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A RY++ GGK++R L A A+E IH YSL+HDDLP+ D Sbjct: 38 RLYEAXRYSVXNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAXD 97 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIG 155 + +RRG+PT H +DE AI+AG+GL + AF + P + IR + + +L G Sbjct: 98 DDDLRRGQPTTHKAFDEAXAILAGDGLQSLAFSALLDPALSDASAEIRLRXVTTLAQAAG 157 Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRC 212 G +GGQ +D+ +D+ + + KTGAL+ + GA+ + A + E + L+ Sbjct: 158 PAGXVGGQAIDLGSVGLKLDQQALEYXHRHKTGALIEASVILGALASGRAEKGELKALQT 217 Query: 213 FGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD E D Sbjct: 218 YAQAIGLAFQVQDDILDVESD 238 >gi|55377016|ref|YP_134866.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC 43049] gi|55229741|gb|AAV45160.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC 43049] Length = 346 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 26/219 (11%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIR-SFLVTECASLFNVNHLTA---------------L 73 + Q D L A RY L GGK++R + L+ SL +V+ LTA + Sbjct: 27 LPVQKPDHLYEASRYLLDAGGKRLRPTVLLLVAESLLDVDPLTADYRDFPTLEGGQADMM 86 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 AIE I ++LIHDD+ MD+ +RRG P VH +YD TAI+AG+ L + AFE + Sbjct: 87 SAALAIEVIQTFTLIHDDI--MDDDALRRGVPAVHKEYDLSTAILAGDTLYSKAFEFLLE 144 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMC 190 + + + L+ T + GQ LDI Q + + + + ++KT L Sbjct: 145 TGAAHERTVDANKRLATT----CTRICEGQSLDIEFEQRDVVTPEEYLEMVELKTAVLYG 200 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A A + A + + L +G ++G FQ+ DDLLD Sbjct: 201 AAASIPATLLGADEQTVDALYNYGLDVGRAFQIQDDLLD 239 >gi|319784751|ref|YP_004144227.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170639|gb|ADV14177.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 338 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 22/240 (9%) Query: 11 ENSKRIDTILDDLLLQTASHM---------QTQHNDRLLSAIRYALL--GGKKIRSFLVT 59 EN KR + DL+ TA+ M + + ++ + L+ GGK++R L Sbjct: 8 ENGKREPASIKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTL 67 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A +F +++ ++E +H +L+HDD+ +D +RRGK T + + +++ Sbjct: 68 AAAQMFGYAGEGHVKLATSVEFMHTATLLHDDV--VDESGMRRGKKTARMIWGNQASVLV 125 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ LL AF ++ + + + +LS +I +G + Q+ ++ E + F Sbjct: 126 GDFLLGQAFRMMVDVGS-----LEALDILSSAASIIAEGEVM-QLAAAKNLETTEDEHFA 179 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 + K KT AL A E G ++A A++N++ LR +G NLG+ FQL DD LD +DL K Sbjct: 180 VIKAKTAALFSAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGK 239 >gi|284162554|ref|YP_003401177.1| polyprenyl synthetase [Archaeoglobus profundus DSM 5631] gi|284012551|gb|ADB58504.1| Polyprenyl synthetase [Archaeoglobus profundus DSM 5631] Length = 293 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 16/184 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R +V A L ++ + + A+E IH SL+HDD+ +D G +RR +H Sbjct: 39 GGKRTRPLIVLLSAKLCGGDYKDVMDMALAVELIHTASLVHDDI--IDRGVMRRNVKALH 96 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++YD AI+ G+ L++ + E++S P +K+ ++ +M+S G++LD+ Sbjct: 97 VEYDISLAILVGDWLISKSVELVSKYPSQIIKEFAKTGMMMS-----------EGEVLDV 145 Query: 168 QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + E F KT +L + ++ A++ + E++ +G NLGI +QL D Sbjct: 146 YSPYERFTEDTYFKCITFKTASLFAYGAKNSAMVVCDDEKAWEKMFEYGLNLGIAYQLVD 205 Query: 226 DLLD 229 DLL+ Sbjct: 206 DLLE 209 >gi|255011168|ref|ZP_05283294.1| putative isoprenoid biosynthesis related protein [Bacteroides fragilis 3_1_12] Length = 276 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 11/161 (6%) Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AIE H Y+L+HDDL MD +RRGK TVH +++ TAI++G+ ++ A++ ++S Sbjct: 17 ATAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMMVLAYQYMASCS 74 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFMIQKMKTGALMCFA 192 ++ + + SLT L+ G QM + +D+ +E + MI ++KT L+ + Sbjct: 75 SEYLKEVMD--LFSLT---ALEICEGQQMDMGFESRDDVKEEEYLEMI-RLKTAVLLAAS 128 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GAI+ AS+ + E L FG +G+ FQL DDLLD D Sbjct: 129 LKIGAILGGASREDAENLYDFGMQIGVAFQLQDDLLDVYGD 169 >gi|110633068|ref|YP_673276.1| polyprenyl synthetase [Mesorhizobium sp. BNC1] gi|110284052|gb|ABG62111.1| Polyprenyl synthetase [Chelativorans sp. BNC1] Length = 338 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F + +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMITLAAAQMFGYSGEGHVKLATSVEFMHTATLLHDDV--VDESDMRRGKKTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF ++ + ++ S + +Q + + + Sbjct: 115 TIWGNQASVLVGDYLLGQAFRMMVDVGSLEALDVLSSAASIIAEGEVMQLGVSKNLETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + K KT AL A E G I+A AS+N++ LR FG NLG+ FQL DD L Sbjct: 175 DEYLS------VIKAKTAALFSAAAEVGPIIAEASRNDRAALRSFGINLGLAFQLVDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|317493609|ref|ZP_07952030.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918552|gb|EFV39890.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 323 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLSARALNYTGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ +R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTSLQS-----LRVLELMSEATNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI+A A+ ++ L+ +G LG FQL DDLL Sbjct: 155 DPNITEENYMRVIYSKTARLFEAAAQSSAILAGATHEQEIALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|86139019|ref|ZP_01057590.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193] gi|85824250|gb|EAQ44454.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193] Length = 332 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 13/212 (6%) Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82 L+QT M ++H R+ + + GGK++R L A L +++ A +E I Sbjct: 27 LIQT--RMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAARLCGYEGAHHVKLAATVEFI 84 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDN 141 H +L+HDD+ +D RRG+PT ++ +D ++++ G+ L + +F++ + + Q+ D Sbjct: 85 HTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLQVLD- 141 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 ++ + + I +L QM + DE + + KT AL A + G ++A Sbjct: 142 ----ILANASATIAEGEVL--QMTAASNLATDEAVYLQVVRGKTAALFSAATQVGGVIAA 195 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + + + L +G+ LGI FQ+ADDLLD + D Sbjct: 196 APETQIKGLFDYGDALGIAFQIADDLLDYQGD 227 >gi|110636883|ref|YP_677090.1| geranyltranstransferase [Cytophaga hutchinsonii ATCC 33406] gi|110279564|gb|ABG57750.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Cytophaga hutchinsonii ATCC 33406] Length = 325 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 12/199 (6%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L IRY + LGGK++R L +F + + A+E H ++L+HDD+ MDN Sbjct: 28 LYEPIRYIMDLGGKRMRPLLTILSNYIFTEDTNNVMNAAIAVEVFHNFTLMHDDI--MDN 85 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGK TVH +++ AI++G+ +L A++ + + + + + N Sbjct: 86 APLRRGKATVHAKWNTNIAILSGDVMLVEAYKQLMTIDEKYLKQVLDRF------NETAA 139 Query: 158 GMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G+ GQ D+ E + V + ++KT L+ F+ E G I+ A + L G Sbjct: 140 GVCEGQQFDMNFESLPTISVDDYINMIRLKTAVLLGFSMELGGILGDADEKSCTYLNTVG 199 Query: 215 ENLGIIFQLADDLLDCEED 233 + GI FQL DDLLD D Sbjct: 200 ISAGIGFQLKDDLLDVYGD 218 >gi|269467946|gb|EEZ79681.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster bacterium] Length = 288 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 121/221 (54%), Gaps = 16/221 (7%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71 ++RI+ LD+ L+ S L ++RY++L GGK+ R L A+ F+ + Sbjct: 11 TERINKKLDECLISQGS---------LTKSMRYSVLSGGKRFRPILTYAVANTFSTDLNR 61 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A A+E IH YSLIHDDLP+MD+ R +P H ++ E AI+ G+GL AFE + Sbjct: 62 ADSSACAVELIHAYSLIHDDLPAMDDDDTRHNQPACHRKFGEAQAILTGDGLQALAFETL 121 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALM 189 + + +R +L+ +LTH M GQ +D+ + ID + + + KTGAL+ Sbjct: 122 VNDHN-ISSEMRIKLLQALTH--ASFEMAEGQSIDLSVVSQVIDIKTLKNMHRKKTGALL 178 Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLD 229 + + GA+++ ++ + E L F ++G+ +Q+ DD+LD Sbjct: 179 NCSIKLGALLSDQCNKKDFEILDDFSADIGLAYQIQDDVLD 219 >gi|220916330|ref|YP_002491634.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|219954184|gb|ACL64568.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 293 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 108/203 (53%), Gaps = 17/203 (8%) Query: 38 RLLSAIRYALLGG-KKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLP 93 RL+ A+RYALLGG K++R LV + A+R A+E IH YSL+HDDLP Sbjct: 36 RLVEAMRYALLGGGKRMRPALVLAACEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLP 95 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTH 152 +MD+ +RRG+PTVH YDE TA++ G+GL + AF +++SP D + L L Sbjct: 96 AMDDDDLRRGRPTVHKAYDEPTAVLVGDGLQSLAFAHLLASP-----DPAAAPLARLLAE 150 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 N L M+ GQ D+ E + E +V + + KT + A A + E Sbjct: 151 NAQL--MVEGQARDMAGEHARLGEAEVMELMRTKT---GALLAAAVAGGARCAGVPVEAA 205 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 G LG+ FQ+ADDLLD D Sbjct: 206 YPVGLKLGLAFQIADDLLDLTAD 228 >gi|258544867|ref|ZP_05705101.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC 15826] gi|258519890|gb|EEV88749.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC 15826] Length = 326 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R L L + A+ A IE IH +L+HDD+ +D +RRGKP+ + Sbjct: 47 GGKRFRPLLTLLSCGLCDYRGEHAITAAAFIEFIHNATLLHDDV--VDESALRRGKPSAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + +++ G+ L T AF+++ N M++ N+ G + Q+ ++ Sbjct: 105 IAFGNAASVLVGDFLYTRAFQLMVR-----TGNSAVIAMMADAVNLIAAGEVM-QLGNMH 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + ++KT L AC++ ++A + E+L +G LG+ FQ+ DDLL Sbjct: 159 DPDVDEPRYYRVIELKTAVLFAAACKTAGLLAGLPEARSEQLAVYGRKLGMAFQIMDDLL 218 Query: 229 DCEED 233 D D Sbjct: 219 DYTGD 223 >gi|163852146|ref|YP_001640189.1| polyprenyl synthetase [Methylobacterium extorquens PA1] gi|163663751|gb|ABY31118.1| Polyprenyl synthetase [Methylobacterium extorquens PA1] Length = 288 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 112/221 (50%), Gaps = 18/221 (8%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECA-SLFNVNHL 70 +RI+T+LD+ + SH + LL+ AIRYA+ GG +IR L A + + + Sbjct: 5 RRIETVLDNAV----SHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPA 60 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + AAIE +HC SL+HDDLP D+ RR KP+VH + A++ G+ L+ AFE Sbjct: 61 ASEAAAAAIELLHCASLVHDDLPCFDDAPTRRQKPSVHAAFGVPLAVLTGDALIVAAFET 120 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 ++ + ++ R ++ L G++ GQ + + ++D + Q+ KTGAL Sbjct: 121 LA--RGVIRSPARLAGLVGLIARAAGSPSGIVAGQAWE-SEPYVDLVE---YQQAKTGAL 174 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A A+ R GE LG +Q+ADDL D Sbjct: 175 F---AAATVAGAGAAGAPPLPWRLLGECLGAAYQVADDLRD 212 >gi|13476175|ref|NP_107745.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099] gi|14026935|dbj|BAB53531.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099] Length = 338 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 22/240 (9%) Query: 11 ENSKRIDTILDDLLLQTASHM---------QTQHNDRLLSAIRYALL--GGKKIRSFLVT 59 EN KR + DL+ TA+ M + + ++ + L+ GGK++R L Sbjct: 8 ENGKREPASIKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTL 67 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A +F +++ ++E +H +L+HDD+ +D +RRGK T + + +++ Sbjct: 68 AAAQMFGYAGEGHVKLATSVEFMHTATLLHDDV--VDESGMRRGKKTARMIWGNQASVLV 125 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ LL AF ++ + + + +LS +I +G + Q+ ++ E + F Sbjct: 126 GDFLLGQAFRMMVDVGS-----LEALDILSSAASIIAEGEVM-QLAAAKNLETTEDEHFA 179 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 + K KT AL A E G ++A A++N++ LR +G NLG+ FQL DD LD +DL K Sbjct: 180 VIKAKTAALFSAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGK 239 >gi|67003501|dbj|BAD99412.1| GGPP synthase [Brevundimonas sp. SD212] Length = 298 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 95/183 (51%), Gaps = 4/183 (2%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R + A+ AL G A+E H SL+ DDLP MD+ +RRG+PT+H Sbjct: 53 GKRVRPVVAMLAAAHVGGRAEDALDFGCAVEMAHAASLVLDDLPCMDDAALRRGQPTLHR 112 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 ++ E A++A LL + +I +++ R + LT IG G+ GQM D++D Sbjct: 113 RHGEDAAVLAAVALLNQSTRLIL--QSRAPSEARLGALDDLTQAIGFDGLAEGQMRDLRD 170 Query: 170 EFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + + V + I +KTGAL A G M ++ RL FGE +G FQL DDL Sbjct: 171 DPVQRDVVALRRINDLKTGALFVAAARGGGRMGGGDADDLARLAAFGEAVGFAFQLCDDL 230 Query: 228 LDC 230 +D Sbjct: 231 MDA 233 >gi|157368719|ref|YP_001476708.1| octaprenyl diphosphate synthase [Serratia proteamaculans 568] gi|157320483|gb|ABV39580.1| Polyprenyl synthetase [Serratia proteamaculans 568] Length = 323 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALHYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI++ AS E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSAILSDASVAEEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|315654711|ref|ZP_07907617.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 51333] gi|315491175|gb|EFU80794.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 51333] Length = 350 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 22/220 (10%) Query: 20 LDDL--LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV-- 75 LDD+ +L + Q + L+S +R A GGK++R L + L + + +V Sbjct: 32 LDDIEQMLVQETQTQREKTSALVSHLRAA--GGKRMRPLLTLLVSQLGAPDQPVSSQVKQ 89 Query: 76 -GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E H SL HDDL MD +RRG P H+Q++ A++AG+ + + A ++S Sbjct: 90 GAVAVELTHLASLYHDDL--MDEATMRRGVPAAHVQWNNTLAVMAGDLIFSRASLLVSG- 146 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM-IQKMKTGALMCF 191 L I +Q H+ + + GQM DI D D + ++ + + KTGAL+ Sbjct: 147 ---LNPTIVAQ------HSRTFERLCQGQMRDIFGPDSHDDPIEFYIDVLRDKTGALIGC 197 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A GA ++ + FGE+LG+ FQ+ADD+LD + Sbjct: 198 AALYGAELSGCDAATVSAVTQFGEDLGVAFQIADDVLDLQ 237 >gi|288563197|pdb|3LJI|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 gi|290560563|pdb|3LSN|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed With Magnesium Length = 304 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 5/201 (2%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL A RY++ GGK++R L A A+E IH YSL+HDDLP+ D Sbjct: 31 RLYEAXRYSVXNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAXD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIG 155 + +RRG+PT H +DE AI+AG+GL + AF + P + IR + + +L G Sbjct: 91 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRXVTTLAQAAG 150 Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRC 212 G +GGQ +D+ +D+ + + KTGAL+ + GA+ + A + E + L+ Sbjct: 151 PAGXVGGQAIDLGSVGLKLDQQALEYXHRHKTGALIEASVILGALASGRAEKGELKALQT 210 Query: 213 FGENLGIIFQLADDLLDCEED 233 + + +G+ FQ+ DD+LD E D Sbjct: 211 YAQAIGLAFQVQDDILDVESD 231 >gi|322387923|ref|ZP_08061530.1| geranyltranstransferase [Streptococcus infantis ATCC 700779] gi|321141196|gb|EFX36694.1| geranyltranstransferase [Streptococcus infantis ATCC 700779] Length = 291 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 11/211 (5%) Query: 29 SHMQTQHNDRLLSA-IRYALL-----GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIEC 81 S ++ + D+ L+A +R A+L GGK+IR +L+ E V A +V AA+E Sbjct: 12 SALEEFYGDQQLAANLREAVLYSIHAGGKRIRPYLLLEVLESLQVPITIAHAQVAAALEM 71 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH SLIHDDLP+MD+ RRG T H ++ E AI+AG+ L + +I+ + L + Sbjct: 72 IHTGSLIHDDLPAMDDDDFRRGSLTNHKKFGEALAILAGDALFLDPYALIA--QANLPNE 129 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIM 199 I+ L+ SL+ + G GM+ GQ+LD++ E ++ ++ I KTG L+ F ++ ++ Sbjct: 130 IKVDLIASLSLSSGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKTGKLLAFPFQAAGVI 189 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A +N + +L+ GE +G+ FQ+ DD+LD Sbjct: 190 AELDENLQIQLKTVGELIGLAFQVRDDILDV 220 >gi|241888826|ref|ZP_04776132.1| heptaprenyl diphosphate synthase component 2 [Gemella haemolysans ATCC 10379] gi|241864502|gb|EER68878.1| heptaprenyl diphosphate synthase component 2 [Gemella haemolysans ATCC 10379] Length = 315 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 24/207 (11%) Query: 33 TQHNDRLLSAI--RYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLI 88 T+ ND L I +Y L GGK++R L+ CA L F +N +R+ + +E IH SLI Sbjct: 20 TRSNDEQLDEIVKKYFLNGGKRVRVLLLLMCAKLGNFELNKKDIIRMASIVEIIHTASLI 79 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +DN RRG T++ +Y A+ G+ Y F ++ + DN + L L Sbjct: 80 HDDI--IDNADTRRGSVTMNKEYSNEFALRVGD----YLFSVVLKEVAKF-DNEKIHLYL 132 Query: 149 SLTHNIGLQGMLGGQML------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202 + T L+ + G+++ DI+ +D + K KT L+ FAC +G+I+A A Sbjct: 133 AET----LKELCIGELIQADGLYDIKTRRLDYLKKI---KRKTAILIAFACVAGSIVADA 185 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD 229 S + +G LG+ +Q+ DD LD Sbjct: 186 SDEDIRSAFSYGYYLGMSYQIIDDYLD 212 >gi|31621279|gb|AAP59037.1| CrtE [Thiocapsa roseopersicina] Length = 288 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 11/195 (5%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSM 95 RL A+R+A+ GG ++R L A+ + A GA+IE +HC SL+HDDLP Sbjct: 26 RLAEAVRHAVFPGGARVRPRLCLAVAAACGSRDVEAADAAGASIELLHCASLVHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRG P+VH Y E A++AG+ L+ AFE ++ + + + L+++++ +G Sbjct: 86 DDSPLRRGLPSVHRAYGEPLAVLAGDALIVLAFENLARVLGNSPERL-APLLMTVSRAVG 144 Query: 156 L-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + G++ GQ + + + V + KT + A A + + + R G Sbjct: 145 MPSGIVAGQAWECEPKV----SVADYHRAKT---GALFAAATAAGAQVAGADADAWRVVG 197 Query: 215 ENLGIIFQLADDLLD 229 + +G +Q+ADDL D Sbjct: 198 DKIGEAYQVADDLRD 212 >gi|311693395|gb|ADP96268.1| trans-hexaprenyltranstransferase [marine bacterium HP15] Length = 322 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 102/185 (55%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + L++ A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLSSQAAGYEENDHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ L AFE++ K+ +R +LS + +G + Q+++++ Sbjct: 101 ARWGNAPSVLVGDFLYARAFEMMVELKS-----LRIMDVLSHATAVIAEGEVM-QLMNVK 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + E Q + KT L A +GA++AHAS ++ L+ +G++LG+ FQL DD+L Sbjct: 155 NPDLTEEQYMKVIHNKTAMLFEAASHTGALLAHASAEQELGLKDYGKHLGLAFQLVDDVL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYQGD 219 >gi|320106552|ref|YP_004182142.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4] gi|319925073|gb|ADV82148.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4] Length = 329 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 116/220 (52%), Gaps = 18/220 (8%) Query: 16 IDTILDDLL-LQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA 72 D + DDL ++ Q+ R+++ I LL GGK+IR L+ A + + Sbjct: 13 FDLLRDDLAAVEREFARQSSSEVRVITEIAEYLLAGGGKRIRPLLLLLSAKALHFRGESR 72 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +R+GA +E +H +L+HDD+ +D RRG+P+ + + ++AG+ L +F++ Sbjct: 73 IRLGAVVEMLHTATLVHDDI--IDAADTRRGRPSSNTAWGNSKCVLAGDWLYMQSFQVAM 130 Query: 133 SPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189 + + D L++SLT Q M+ G++L IQ I+E + F + KT +L Sbjct: 131 EERNFHVLD-----LLISLT-----QQMVEGELLQIQKLGRLINEEEYFDLIFRKTASLF 180 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + GA +A A + + +L +G NLG+ FQ+ DD+LD Sbjct: 181 RVSMQLGAAIADAPKEIEGQLGEYGRNLGLAFQIVDDVLD 220 >gi|322392008|ref|ZP_08065471.1| geranyltranstransferase [Streptococcus peroris ATCC 700780] gi|321145106|gb|EFX40504.1| geranyltranstransferase [Streptococcus peroris ATCC 700780] Length = 291 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 118/201 (58%), Gaps = 6/201 (2%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDD 91 Q + L A+ Y++ GGK+IR +L+ E V A +V AA+E IH SLIHDD Sbjct: 22 QVSSSLREAVLYSVHAGGKRIRPYLLLEVLESLQVPITIAHAQVAAALEMIHTGSLIHDD 81 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 LP+MD+ RRG+ T H ++ E AI+AG+ L + +I+ + L + I+ L+ SL+ Sbjct: 82 LPAMDDDDFRRGRLTNHKKFGEALAILAGDALFFDPYALIA--QADLPNEIKIDLIASLS 139 Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + G GM+ GQ+LD++ E ++ ++ I KTG L+ + ++ AI+A + + + Sbjct: 140 LSSGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKTGKLLAYPFQAAAIIAELTPELQAK 199 Query: 210 LRCFGENLGIIFQLADDLLDC 230 L+ GE +G+ FQ+ DD+LD Sbjct: 200 LKTVGELVGLAFQVRDDVLDV 220 >gi|327398180|ref|YP_004339049.1| polyprenyl synthetase [Hippea maritima DSM 10411] gi|327180809|gb|AEA32990.1| Polyprenyl synthetase [Hippea maritima DSM 10411] Length = 316 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 20/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK++R LV AS ++ AL VG+A+E IH SL+HDD+ +D+ RRGKP H Sbjct: 42 GKRLRPLLVLYSASALGIDEPKDALVVGSAVELIHTASLLHDDI--IDDALYRRGKPASH 99 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDI 167 Y A++ G+ L + A+ I+ + I R+ +LS G++ +I Sbjct: 100 TVYGIKPAVMGGDYLYSLAYNIVLDYDVDVAKAISRAAYILS-----------EGEIEEI 148 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + F I + + KT L+ +CESGAI+A+ + + +G+NLG+ FQ+ Sbjct: 149 EQAFKVNIGFDDYYRVIYKKTAVLIEASCESGAILAN--KQFSPVFKEYGKNLGLAFQIK 206 Query: 225 DDLLDCEED 233 DD LD + D Sbjct: 207 DDCLDYQAD 215 >gi|116753785|ref|YP_842903.1| farnesyltranstransferase [Methanosaeta thermophila PT] gi|116665236|gb|ABK14263.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Methanosaeta thermophila PT] Length = 327 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 17/232 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 G L ++L+ + I +D+LL + L A R+ L GGK++R L+ Sbjct: 6 GGDLEAELRRRADLISKAIDELL-------PVSRPEGLYDAARHLLGAGGKRLRPSLLLI 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + + AIE +H ++LIHDD+ MDN +RRGKP VH+ + AI+AG Sbjct: 59 AGESVGCDAARLVPAAVAIELVHNFTLIHDDI--MDNASLRRGKPAVHVIWGTSGAILAG 116 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177 + L + AFE++S + + + ML+ T + GQ D++ E + E + Sbjct: 117 DTLYSKAFEMLSMVDAPPERVLAAMDMLARTCT----SICEGQWQDLEFERAESVTEKEY 172 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + KTG L + GA + A L FG G+ FQ+ DD+LD Sbjct: 173 LEMIEKKTGVLYGASAWIGATLGGAPPEVAGGLEEFGRLTGMGFQIHDDILD 224 >gi|307330864|ref|ZP_07609998.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu 4113] gi|306883489|gb|EFN14541.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu 4113] Length = 329 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 98/187 (52%), Gaps = 21/187 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + A+R E +H SL HDD+ MD RRG P+V+ Sbjct: 48 GGKRLRPLLALVGAEFGDRDPSAAVRAATLAELVHVASLYHDDV--MDQARTRRGVPSVN 105 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 ++ TA++AGN LL+ A ++ + P+ +L+ + ++L++ GQ+ Sbjct: 106 ARWGNTTAVLAGNWLLSKAAQLAAELGPEAIRLQSKVTNRLIM-------------GQIR 152 Query: 166 DIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 ++ D+ + F + K+ +L+ A + GA+ A + + L +GE+LGI FQ Sbjct: 153 ELVGPSDDDDPLSHYFTVVAGKSASLIAMALQLGAVRTGAPEPAVQALAEYGEHLGIAFQ 212 Query: 223 LADDLLD 229 ++DD+LD Sbjct: 213 ISDDILD 219 >gi|83941379|ref|ZP_00953841.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36] gi|83847199|gb|EAP85074.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36] Length = 332 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 111/217 (51%), Gaps = 12/217 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 T ++DL+ M ++H R+ + + GGK++R L A L + + + Sbjct: 22 TAVNDLIR---DRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYDGPYHVHLA 78 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L +F++++ Sbjct: 79 ATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTE--- 133 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196 +N+R +L+ +G + Q+ Q+ DE + + KT AL A + G Sbjct: 134 --TNNMRVLAILANASATIAEGEVL-QLTAAQNLATDEGIYLQVVRGKTAALFSAATQVG 190 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++A A + + L +G+ LGI FQ+ DDLLD + D Sbjct: 191 GVIATAPDAQVQALYDYGDALGIAFQIVDDLLDYQGD 227 >gi|260576245|ref|ZP_05844237.1| Polyprenyl synthetase [Rhodobacter sp. SW2] gi|259021513|gb|EEW24817.1| Polyprenyl synthetase [Rhodobacter sp. SW2] Length = 333 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 11/201 (5%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + A +E IH +L+H Sbjct: 33 MASEHAPRIPQVTAHLVEAGGKRLRPLLTLAAARLCGYGGPFHVHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLML 148 DD+ +D RRG+PT ++ +D ++++ G+ L +F+++ P N+R ++ Sbjct: 93 DDV--VDESSRRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVEPG-----NLRVLDILA 145 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + + +I +L Q+ QD E + + KT AL A E G ++A A ++ + Sbjct: 146 NASASIAEGEVL--QLTAAQDLATTEAIYLQVVRGKTAALFSAATEVGGVIAGAPADQVK 203 Query: 209 RLRCFGENLGIIFQLADDLLD 229 L +G+ LG+ FQ+ DDLLD Sbjct: 204 ALFTYGDALGVAFQIVDDLLD 224 >gi|14625000|dbj|BAB61880.1| farnesyl diphosphate synthase [Rhodobacter azotoformans] Length = 137 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 8/130 (6%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG PTVH ++DE TA++AG+ L T AFE+++ P +R +L+ +L G +GM Sbjct: 12 LRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAEVRIRLVETLARASGAEGM 70 Query: 160 LGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + GQ LDI E + Q+ +Q KTGAL+ ++ E+GAI+ A LR + Sbjct: 71 VLGQALDIAAETAAVPLTLEQITHLQAGKTGALIRWSAEAGAILGQADTGP---LRRYAT 127 Query: 216 NLGIIFQLAD 225 LG+ FQ+AD Sbjct: 128 ALGLAFQVAD 137 >gi|15602211|ref|NP_245283.1| IspB [Pasteurella multocida subsp. multocida str. Pm70] gi|12720590|gb|AAK02430.1| IspB [Pasteurella multocida subsp. multocida str. Pm70] Length = 330 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + IE IH +L+HDD+ +D +RRG PT + Sbjct: 50 GGKRIRPMIAILAARALGFHGEQPITCATFIEFIHTATLLHDDV--VDESALRRGNPTAN 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF+++ TQL D++R ++S N+ +G + Q++++ Sbjct: 108 AEFGNAASVLVGDFIYTRAFQLM----TQL-DSLRILKVMSDATNVIAEGEVQ-QLMNVN 161 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A AI+AHA++ ++ LR +G LG FQL DD+L Sbjct: 162 DPNTTEENYMQVIYGKTARLFEAATHCAAILAHATEAQENALREYGCYLGTAFQLVDDIL 221 Query: 229 DCEED 233 D D Sbjct: 222 DYSAD 226 >gi|126666697|ref|ZP_01737674.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] gi|126628742|gb|EAZ99362.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] Length = 322 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 102/187 (54%), Gaps = 12/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + N L++ A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLASRATGYNEDNHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL--QGMLGGQMLD 166 ++ +++ G+ L AFE++ ++ +M L+H + +G + Q+++ Sbjct: 101 AKWGNAPSVLVGDFLYARAFEMMVELESL-------PIMKVLSHATAVIAEGEVM-QLMN 152 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 +++ + E Q + KT L + SGA++A A+ ++E L+ +G++LG+ FQL DD Sbjct: 153 VKNPDLTENQYMQVIHNKTAMLFEASSHSGALLAGANHAQEEALKNYGKHLGLAFQLVDD 212 Query: 227 LLDCEED 233 +LD D Sbjct: 213 VLDYRGD 219 >gi|241761105|ref|ZP_04759194.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374724|gb|EER64185.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 337 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ C+ L ++ AAIE IH +L+HDD+ +D+ +RRGK T + Sbjct: 56 GGKRMRPMLMLACSRLIGEPRDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTAN 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++ G+ LL+ AFE++ + +R+ +LS I QG + + Q Sbjct: 114 NIWGNGPTVLVGDFLLSRAFEMMVESGS-----LRALEILSNAAAIITQGEVDQLVSQYQ 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E DE + I KT L +C A+MA S+++++ L +G+ LGI FQL DD + Sbjct: 169 VE-TDEARYLSIIGAKTAVLFAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAI 227 Query: 229 DCEED 233 D D Sbjct: 228 DYMSD 232 >gi|56551460|ref|YP_162299.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543034|gb|AAV89188.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 337 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ C+ L ++ AAIE IH +L+HDD+ +D+ +RRGK T + Sbjct: 56 GGKRMRPMLMLACSRLIGEPRDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTAN 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++ G+ LL+ AFE++ + +R+ +LS I QG + + Q Sbjct: 114 NIWGNGPTVLVGDFLLSRAFEMMVESGS-----LRALEILSNAAAIITQGEVDQLVSQYQ 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E DE + I KT L +C A+MA S+++++ L +G+ LGI FQL DD + Sbjct: 169 VE-TDEARYLSIIGAKTAVLFAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAI 227 Query: 229 DCEED 233 D D Sbjct: 228 DYMSD 232 >gi|260752929|ref|YP_003225822.1| trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552292|gb|ACV75238.1| Trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 337 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ C+ L ++ AAIE IH +L+HDD+ +D+ +RRGK T + Sbjct: 56 GGKRMRPMLMLACSRLIGEPRDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTAN 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++ G+ LL+ AFE++ + +R+ +LS I QG + + Q Sbjct: 114 NIWGNGPTVLVGDFLLSRAFEMMVESGS-----LRALEILSNAAAIITQGEVDQLVSQYQ 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E DE + I KT L +C A+MA S+++++ L +G+ LGI FQL DD + Sbjct: 169 VE-TDEARYLSIIGAKTAVLFAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAI 227 Query: 229 DCEED 233 D D Sbjct: 228 DYMSD 232 >gi|20429105|emb|CAD24417.1| decaprenyl diphosphate synthase [Paracoccus zeaxanthinifaciens] Length = 333 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 9/201 (4%) Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 M ++H R+ + + GGK++R L A L + + A +E IH +L+ Sbjct: 32 RMASRHAPRIPEVTAHLIEAGGKRLRPMLTLAAAKLLGYGGPYHVHLAATVEFIHTATLL 91 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D RRG+PT ++ +D ++++ G+ L +F+++ P + I S Sbjct: 92 HDDV--VDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVEPGSMRTLEILSNAAA 149 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 ++ LQ + QD +E + + KT AL A E G ++A + Sbjct: 150 TIAEGEVLQ------LTAAQDLATNEDIYLQVVRGKTAALFSAATEVGGVIAGVPDAQVR 203 Query: 209 RLRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 204 ALFDYGDALGIAFQIVDDLLD 224 >gi|77464324|ref|YP_353828.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase [Rhodobacter sphaeroides 2.4.1] gi|57115620|gb|AAW33555.1| decaprenyl diphosphate synthase [Rhodobacter sphaeroides] gi|77388742|gb|ABA79927.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Rhodobacter sphaeroides 2.4.1] Length = 333 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 9/200 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + A +E IH +L+H Sbjct: 33 MASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D + RRGKPT ++ +D ++++ G+ L +F+++ + +I + + Sbjct: 93 DDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVMDILANASAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 ++ LQ + QD E + + KT AL A E G ++A + + E Sbjct: 151 ISEGEVLQ------LTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPEAQVEA 204 Query: 210 LRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 205 LHAYGDALGIAFQIVDDLLD 224 >gi|121534144|ref|ZP_01665969.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1] gi|121307247|gb|EAX48164.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1] Length = 322 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L CA V + L + AIE IH +L+HDD+ +DN RRG PT + Sbjct: 43 GGKRLRPALYLLCAKSRQVETASLLPIAVAIEMIHMATLVHDDV--IDNAATRRGLPTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ ++++G+ L AF ++ T I + ++ S M G++L I+ Sbjct: 101 SRWGNHVSVLSGDFLFAKAFSTVAKHATPAMLRILTDVVCS---------MCEGEILQIR 151 Query: 169 DEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D F +E + I K KT + +CE G + A + +E LR +G +G+ FQ+ Sbjct: 152 DTFSAEQSEEDYLVRIAK-KTADFIAASCELGGLSAGLAPDEVAALRRYGHAVGMAFQIT 210 Query: 225 DDLLD 229 DD+LD Sbjct: 211 DDILD 215 >gi|291465068|gb|ADE06004.1| polyprenyl synthase [Rhodobacter sphaeroides 2.4.1] Length = 333 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 9/200 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + A +E IH +L+H Sbjct: 33 MASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D + RRGKPT ++ +D ++++ G+ L +F+++ + +I + + Sbjct: 93 DDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVMDILANASAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 ++ LQ + QD E + + KT AL A E G ++A + + E Sbjct: 151 ISEGEVLQ------LTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPEAQVEA 204 Query: 210 LRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 205 LHAYGDALGIAFQIVDDLLD 224 >gi|126463166|ref|YP_001044280.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC 17029] gi|332559215|ref|ZP_08413537.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N] gi|126104830|gb|ABN77508.1| Trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC 17029] gi|332276927|gb|EGJ22242.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N] Length = 333 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 9/200 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + A +E IH +L+H Sbjct: 33 MASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D + RRGKPT ++ +D ++++ G+ L +F+++ + +I + + Sbjct: 93 DDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVMDILANASAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 ++ LQ + QD E + + KT AL A E G ++A + + E Sbjct: 151 ISEGEVLQ------LTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPEAQVEA 204 Query: 210 LRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 205 LHAYGDALGIAFQIVDDLLD 224 >gi|56695234|ref|YP_165582.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3] gi|56676971|gb|AAV93637.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3] Length = 332 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 9/206 (4%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + M ++H R+ + + GGK++R L A L +++ A +E IH +L Sbjct: 30 TRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYQGEDHVKLAATVEFIHTATL 89 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D RRG+PT ++ +D ++++ G+ L +F+++ + +I + Sbjct: 90 LHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVLDILANAA 147 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 ++ LQ M D DE+ + + KT AL A E G ++A + + Sbjct: 148 ATIAEGEVLQ------MTAASDLRTDESVYLQVVRGKTAALFSAATEVGGVIAGVPEAQV 201 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L +G+ LGI FQ+ADDLLD + D Sbjct: 202 RALFEYGDALGIAFQIADDLLDYQGD 227 >gi|83854856|ref|ZP_00948386.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1] gi|83842699|gb|EAP81866.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1] Length = 332 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 111/217 (51%), Gaps = 12/217 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 T ++DL+ M ++H R+ + + GGK++R L A L + + + Sbjct: 22 TAVNDLIR---DRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYDGPYHVHLA 78 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L +F++++ Sbjct: 79 ATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTE--- 133 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196 +N+R +L+ +G + Q+ Q+ DE + + KT AL A + G Sbjct: 134 --TNNMRVLAILANASATIAEGEVL-QLTAAQNLATDEGIYLQVVRGKTAALFSAATQVG 190 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++A A + + L +G+ LGI FQ+ DDLLD + D Sbjct: 191 GVIAAAPDAQVQALFDYGDALGIAFQIVDDLLDYQGD 227 >gi|238750110|ref|ZP_04611613.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380] gi|238711654|gb|EEQ03869.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380] Length = 323 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAILVARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMSDATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A++A+AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLANASEEQEVALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|217069938|gb|ACJ83329.1| unknown [Medicago truncatula] Length = 214 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 71/127 (55%), Gaps = 8/127 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S + E + R++ LDD + + ++ A+RY+LL GGK++R L L Sbjct: 83 SYMIEKATRVNKALDDAV-------SLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELV 135 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ LL Sbjct: 136 GGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLA 195 Query: 126 YAFEIIS 132 +AFE I+ Sbjct: 196 FAFEHIA 202 >gi|325281282|ref|YP_004253824.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712] gi|324313091|gb|ADY33644.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712] Length = 325 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 12/200 (6%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L I+Y + GGK++R L +L+ + AL+ IE H Y+L+HDD+ MD+ Sbjct: 28 LFEPIKYIMEDGGKRLRPVLTLMAYNLYRDDIGKALKSAIGIEIFHNYTLLHDDV--MDD 85 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNI 154 +RRG+ TVH +++ AI++G+ A++ I + P + + +Q+ + + Sbjct: 86 AELRRGRQTVHKKWNSNVAILSGDAAAITAYKYIETCEDPYLRRVIDGFNQVAMDVC--- 142 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +G + +D+ +E + MI +KT L+ + GA++A A ++E + L FG Sbjct: 143 --KGQQYDMEFETRDDVTEEEYIQMIY-LKTSVLIAGSMRHGALIAGAPEHEYKELYDFG 199 Query: 215 ENLGIIFQLADDLLDCEEDL 234 LG++FQL DD LD D+ Sbjct: 200 GYLGLVFQLQDDYLDVYGDV 219 >gi|227113758|ref|ZP_03827414.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 323 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S +I+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|259415043|ref|ZP_05738965.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B] gi|259348953|gb|EEW60707.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B] Length = 336 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 11/216 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +LL+Q M ++H R+ + + GGK++R L A + L++ A +E Sbjct: 29 NLLIQ--ERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYEGDHHLKLAATVE 86 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L +F+++ + Sbjct: 87 FIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVDTGSLRVL 144 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 +I + ++ LQ M D E + + KT AL A E G ++A Sbjct: 145 DILANASATIAEGEVLQ------MTAATDLRTTEEIYLQVVRGKTAALFSAATEVGGVIA 198 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A+ + + L +G+ LGI FQ+ADDLLD + D K Sbjct: 199 SATDAQVKALYDYGDALGIAFQIADDLLDYQGDTAK 234 >gi|329905263|ref|ZP_08274077.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae bacterium IMCC9480] gi|327547655|gb|EGF32446.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae bacterium IMCC9480] Length = 243 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV A F N + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 50 GGKRIRPALVLLMARAFGYNGTHHHDLAAVVEFIHTATLLHDDV--VDESSLRRGRQTAN 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + + AF+++ S D++R +LS N+ +G + Q+L++ Sbjct: 108 ALFGNAASVLVGDFVYSRAFQMMVS-----VDDMRVMRILSDATNVIAEGEVL-QLLNMH 161 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + + KT L A + GA++A AS + E +G +LG FQL DD+L Sbjct: 162 DPDVTEARYLQVIRSKTAKLFEAAAQLGALVAGASAEDVEAAAEYGRSLGTAFQLIDDVL 221 Query: 229 D 229 D Sbjct: 222 D 222 >gi|68171324|ref|ZP_00544722.1| Farnesyltranstransferase [Ehrlichia chaffeensis str. Sapulpa] gi|88657619|ref|YP_506918.1| octaprenyl-diphosphate synthase [Ehrlichia chaffeensis str. Arkansas] gi|67999251|gb|EAM85903.1| Farnesyltranstransferase [Ehrlichia chaffeensis str. Sapulpa] gi|88599076|gb|ABD44545.1| octaprenyl-diphosphate synthase [Ehrlichia chaffeensis str. Arkansas] Length = 325 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + N N+ + + AAIE IH +L+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPIIFFIICKMLNCNNENKVPIAAAIELIHNATLLHDDV--IDESELRRGEKTSN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167 + + +I+ G+ LL +F+ + K +I SQ + +G +Q M+ ++I Sbjct: 107 VIWGNKASILVGDFLLAISFQWLIKCKNLNILSILSQASKDVI--VGEVQQMISSHNINI 164 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 E + I KT AL CES A +A S EKE L+ FG N GI FQ+ DD+ Sbjct: 165 SKE-----KYIEIISAKTAALFSATCESAANLAQTSNEEKEALKNFGNNFGISFQIMDDI 219 Query: 228 LD 229 LD Sbjct: 220 LD 221 >gi|254785128|ref|YP_003072556.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901] gi|237684423|gb|ACR11687.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901] Length = 320 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + + A IE IH +L+HDD+ +D +RRG+P+ + Sbjct: 41 GGKRLRPLLVLLAAKALGYQGQQHIELAAIIEFIHTATLLHDDV--VDVSALRRGRPSAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Q+ +++ G+ L + AF+++ NI ++S T N+ +G + Q+++ + Sbjct: 99 AQWGNAPSVLVGDFLYSRAFQMMVG-----VGNIDVMAIMSDTTNVISEGEVQ-QLVNAK 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + KT AL ACE+GA++A S ++ ++ G +LG+ FQL DD L Sbjct: 153 DPDVTEQNYMAVIHKKTAALFEAACETGAVIAGVSSEQRASIKQIGYHLGVAFQLVDDAL 212 Query: 229 D 229 D Sbjct: 213 D 213 >gi|253686958|ref|YP_003016148.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753536|gb|ACT11612.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 323 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S +I+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|227328594|ref|ZP_03832618.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 296 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S +I+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|313903572|ref|ZP_07836962.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965] gi|313466125|gb|EFR61649.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965] Length = 331 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A F + L V AA+E IH +L+HDD+ +D RRG PTV+ Sbjct: 53 GGKRLRPALVLLAARNFQYDRERLLPVAAAVELIHMATLVHDDI--VDGATARRGLPTVN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +++ TA++ G+ L AF ++++ DN Q+M + + + Q + Sbjct: 111 VRWGTGTAVLTGDFLFARAFSLLAAD----GDNRVVQVMAEAVYEMSTGEI--EQQAQLF 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT + C G +M A++ + E LR +G +G+ FQ+ DD+L Sbjct: 165 DPSTGEEGYYRRIYKKTAHFISHCCLMGGLMGGATEQQAEALRRYGYGIGMGFQVIDDIL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|293393170|ref|ZP_06637485.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582] gi|291424316|gb|EFE97530.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582] Length = 381 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 101 GGKRIRPMIAVLAARALQYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 158 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S +++R ++S N+ +G + Q++++ Sbjct: 159 AAFGNAASVLVGDFIYTRAFQMMTS-----LESLRVLALMSEAVNVIAEGEVL-QLMNVH 212 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI++ A++ +++ L+ +G LG FQL DDLL Sbjct: 213 DPDITEESYMRVIYSKTARLFEAAAQSSAILSGATEAQEQGLQDYGRYLGTAFQLIDDLL 272 Query: 229 DCEED 233 D D Sbjct: 273 DYSAD 277 >gi|329893636|ref|ZP_08269770.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088] gi|328923563|gb|EGG30875.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088] Length = 320 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 12/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + A IE +H +L+HDD+ +D +RRG+PT + Sbjct: 41 GGKRMRPLLALLTGAALGGISQPHKHFAAVIEFLHTATLLHDDV--VDVSSLRRGRPTAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 Y ++++ G+ + + AF+++ + LKD + T+ I +L Q++ Sbjct: 99 AAYGNASSVLVGDFIYSRAFQLLVNIGDMRILKD------IADTTNRIAEGEVL--QLVR 150 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D ETQ + + + KT L AC GA+++ AS+ + E LR FG NLGI FQ+ DD Sbjct: 151 AGDADTTETQYYEVIQAKTAVLFGAACYGGALLSGASERKAEELREFGINLGIAFQIVDD 210 Query: 227 LLDCEED 233 +LD + D Sbjct: 211 ILDYQGD 217 >gi|255024117|ref|ZP_05296103.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Listeria monocytogenes FSL J1-208] Length = 98 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 54/84 (64%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H Sbjct: 8 GGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNH 67 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS 132 + + TAI+AG+ LLT AF I++ Sbjct: 68 KVFGDATAILAGDALLTLAFSILA 91 >gi|94969054|ref|YP_591102.1| trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis Ellin345] gi|94551104|gb|ABF41028.1| Trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis Ellin345] Length = 331 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 98/184 (53%), Gaps = 15/184 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A L L A+R+GA +E IH +L+HDD+ +D+ IRRG+P+ + Sbjct: 51 GGKRLRPALLLLSAKLMAYRGLGAVRLGAVVEIIHTATLVHDDI--IDDAEIRRGRPSAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 Q+ ++AG+ L AF++ ++ + D ++ LT Q M+ G++L I Sbjct: 109 TQWGNSKCVLAGDWLYMQAFKVAVAERNFAVLDT-----LIELT-----QKMVEGELLQI 158 Query: 168 QD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + + I + F + KT L G I+ A+ + E+L +G +G+ FQ+ D Sbjct: 159 EKLGKLISLQEHFDLIDRKTACLFSVCMRLGGILGGATAEQIEKLGEYGHCVGMAFQIVD 218 Query: 226 DLLD 229 D+LD Sbjct: 219 DVLD 222 >gi|241768108|ref|ZP_04765590.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN] gi|241360555|gb|EER57605.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN] Length = 172 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 24/126 (19%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTA-----------LRVG---------AAIE 80 A+RYA+L GGK++R LV + F H A LR G A+E Sbjct: 43 AMRYAVLDGGKRLRPLLVL---AAFEAVHGEAVAAGAADGNAALRAGMQAAALRAACAVE 99 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSL+HDD+P MDN +RRGKPTVH+Q+ E A++AG+ L +AFE+++ ++ Sbjct: 100 LIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEAQALLAGDALQAFAFELLTPEDERIPP 159 Query: 141 NIRSQL 146 +++ L Sbjct: 160 AVQATL 165 >gi|134095950|ref|YP_001101025.1| octaprenyl diphosphate synthase [Herminiimonas arsenicoxydans] gi|133739853|emb|CAL62904.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Herminiimonas arsenicoxydans] Length = 329 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 50 GGKRIRPVLVLLMANALGYRGTHQYDLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ + NIR+ +L+ N+ +G + Q+L++ Sbjct: 108 ALFGNAASVLVGDFLHSRAFQMMVTVG-----NIRAMQILADATNVIAEGEVL-QLLNMH 161 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + + + KT L A + GA++A AS++E E +G +LG FQL DD+L Sbjct: 162 DPDISEERYTQVIRSKTAKLFEAAAQLGALIAGASEDEIEAAAEYGRSLGTAFQLIDDVL 221 Query: 229 DCE---EDLPK 236 D ED+ K Sbjct: 222 DYSGHAEDIGK 232 >gi|315926233|ref|ZP_07922432.1| heptaprenyl diphosphate synthase component II [Pseudoramibacter alactolyticus ATCC 23263] gi|315620493|gb|EFV00475.1| heptaprenyl diphosphate synthase component II [Pseudoramibacter alactolyticus ATCC 23263] Length = 335 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 67/186 (36%), Positives = 95/186 (51%), Gaps = 17/186 (9%) Query: 50 GKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK +R L+ CASL ++ + A+ + A +E IH SLIHDD+ +D+ RRGKP Sbjct: 54 GKMLRPRLLLLCASLGPAWHAHQREAVELAAMVELIHLASLIHDDI--IDDARFRRGKPA 111 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQML 165 + +Y + A+ AG+ F + QLKD + + +L+ G +G L Sbjct: 112 IQSRYGKDAAVYAGD------FIMARVNYYQLKDGLNAPGAILAEAIEKMCAGEIGQARL 165 Query: 166 DIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + D TQ + K KTGAL AC GA+ + E+L FGE LGI+FQL Sbjct: 166 RHRP---DATQAMYFENIKGKTGALFAAACRIGAMTGGCAPEAIEQLARFGELLGILFQL 222 Query: 224 ADDLLD 229 DDLLD Sbjct: 223 RDDLLD 228 >gi|218531359|ref|YP_002422175.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4] gi|218523662|gb|ACK84247.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4] Length = 340 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 9/182 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L CA L + A+++ AA+E +H +L+HDD+ +D +RRG+ Sbjct: 58 GGKRLRPILTLACADLCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 115 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 I++ +++ G+ LL AF ++ + +R+ +LS + +G + Q+ Sbjct: 116 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 169 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 ++ E + + + KT L ACE G ++A ++E+ R +G NLGI FQL DD+ Sbjct: 170 KNIETSENEYLAVIRGKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDV 229 Query: 228 LD 229 LD Sbjct: 230 LD 231 >gi|329943348|ref|ZP_08292122.1| polyprenyl synthetase family protein [Chlamydophila psittaci Cal10] gi|328814895|gb|EGF84885.1| polyprenyl synthetase family protein [Chlamydophila psittaci Cal10] Length = 290 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 11/203 (5%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + + YAL GGK+IR LV A ++ L AIE IH +LI DDLP MD+ Sbjct: 31 APVEYALTSGGKRIRPMLVCMIAKGLDMGR-DVLDSALAIEFIHTSTLIADDLPCMDDDD 89 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--------NIRSQLMLSLT 151 RRG+PTVH +DE +A++A L+ A+ I +LK + ++ +T Sbjct: 90 ERRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLKSAGVDSKEVDYAYDMISDIT 149 Query: 152 -HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 N G+ G+LGGQ D+ V I KTGAL AC SG + + ++ Sbjct: 150 DKNFGVHGVLGGQYEDMFFNNEGPEHVQSIIHKKTGALFEIACVSGWLFGGGTPECVPQV 209 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 R F + G++FQ+ DD+LD +D Sbjct: 210 REFSQTFGLLFQIKDDILDIHQD 232 >gi|241068508|ref|XP_002408454.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase, putative [Ixodes scapularis] gi|215492442|gb|EEC02083.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase, putative [Ixodes scapularis] Length = 345 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 118/214 (55%), Gaps = 16/214 (7%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVG 76 IL+DL++ + ++ L+ + LL GGK+IR L A +F+ +++ Sbjct: 84 ILNDLIISC-----LKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGDNHIKLA 138 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 +A+E IH +L+HDD+ +D+ +RR KPT +I + T+I+ G+ L + +F+++ + + Sbjct: 139 SAVEFIHTATLLHDDV--VDDSTLRRFKPTANIIWGSKTSILVGDFLFSQSFKLMIASGS 196 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACES 195 I++ +L+ I +G + Q++ + + I + + I K KT L +CE Sbjct: 197 -----IKAMNVLAKASAIISEGEVV-QLVKLNERRIITIEEYQQIVKSKTAELFGASCEV 250 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GAI+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 251 GAIIAEQLDHVSKDMQDFGKLLGTIFQVIDDLLD 284 >gi|170751717|ref|YP_001757977.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] gi|170658239|gb|ACB27294.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] Length = 339 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 10/183 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R L CA L T +++ A++E +H +L+HDD+ +D +RRG+ Sbjct: 56 GGKRLRPILTLACAQLCGYAGATEGDVKLAASVEFMHTATLLHDDV--VDESDMRRGRVA 113 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 I++ +++ G+ LL AF ++ + +R+ +LS + +G + Q+ + Sbjct: 114 ARIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTN 167 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++ DE + + KT L ACE G ++A + E+ R +G NLGI FQL DD Sbjct: 168 AKNLETDEAAYLAVIRGKTAELFAAACEVGPVLAGRPEAEQAAARSYGMNLGIAFQLIDD 227 Query: 227 LLD 229 +LD Sbjct: 228 VLD 230 >gi|288942267|ref|YP_003444507.1| polyprenyl synthetase [Allochromatium vinosum DSM 180] gi|288897639|gb|ADC63475.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180] Length = 289 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 11/195 (5%) Query: 38 RLLSAIRYALL-GGKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 RL A+R+A+ GG ++R L + A+ + ++ A G AIE +HC SL+HDDLP Sbjct: 26 RLAEAVRHAVFPGGARVRPRLCLAVAAACGSRDYAAADAAGVAIELLHCASLVHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRG P+VH + E A++AG+ L+ AFE ++ + + + L+L+++ ++G Sbjct: 86 DDSPLRRGVPSVHRAFGEPLAVLAGDALIILAFEHLARVLADSPERL-APLLLTISRSVG 144 Query: 156 L-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + G+ GQ + + + E + KTG+L + A A + + E G Sbjct: 145 MPHGITAGQAWECEPQVTVEE----YHRAKTGSLF---TAATAAGALVAGADAEAWSVVG 197 Query: 215 ENLGIIFQLADDLLD 229 + +G +Q+ADDL D Sbjct: 198 DKIGEAYQVADDLRD 212 >gi|323343701|ref|ZP_08083928.1| decaprenyl diphosphate synthase [Prevotella oralis ATCC 33269] gi|323095520|gb|EFZ38094.1| decaprenyl diphosphate synthase [Prevotella oralis ATCC 33269] Length = 336 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 98/183 (53%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R L+ A N +T + AA+ E +H SL+HDD+ +D RRG+ + Sbjct: 55 AGKRMRPMLILLIAK--NFGDITPVSQNAAVGLELLHTASLVHDDV--VDESGERRGQAS 110 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 V+ Y+ A++ G+ +L+ A +S ++ +QL +L+ LQ + + Sbjct: 111 VNATYNNKVAVLVGDYILSTALLYVSYTHSETIVRYLAQLGRTLSDGEILQ------LSN 164 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 IQ+ I E + + K KT AL GA+ AHAS+++ E + FG+NLGIIFQ+ DD Sbjct: 165 IQNREISEKVYYEVIKQKTAALFEACAGIGALSAHASESDVEAAKKFGQNLGIIFQIRDD 224 Query: 227 LLD 229 + D Sbjct: 225 IFD 227 >gi|125583193|gb|EAZ24124.1| hypothetical protein OsJ_07863 [Oryza sativa Japonica Group] Length = 342 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 11/221 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70 +++ D+ + + M + +R+ SA+RYA+L G K+ L L Sbjct: 48 SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 107 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL--LTYAF 128 + A++ + L+++DLP + G RRG P+ Y A++AG+ L L Y Sbjct: 108 APVPAALALQMVQAGWLVNEDLPWFEAGPKRRGGPSNQAAYGTDMAVLAGDALFPLAYTH 167 Query: 129 EIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTG 186 I +P + + + +++ L +G GM GQ LD+ + E +V + K G Sbjct: 168 VIAQNPSPEPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 227 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + + GA++ A +E+ LR +G +G+++QL DD+ Sbjct: 228 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 268 >gi|332526065|ref|ZP_08402203.1| geranyltranstransferase [Rubrivivax benzoatilyticus JA2] gi|332109908|gb|EGJ10536.1| geranyltranstransferase [Rubrivivax benzoatilyticus JA2] Length = 306 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 110/204 (53%), Gaps = 21/204 (10%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT----ALRVGAAIECIHCYSLIHDDL 92 +L +AIR+A+ GG +IR L C ++ N T A +AIE IHC SL+HDDL Sbjct: 26 KLAAAIRHAVFPGGARIRPQL---CIAVAMANGDTDPELADAAASAIELIHCASLVHDDL 82 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P D+ RRG+P+VH Y E A++AG+ L+ AF+ + + + + + ++++ ++ Sbjct: 83 PCFDDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQTLGAAGARHPERM-ARVLQTVAR 141 Query: 153 NIGLQ-GMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKER 209 +G G++ GQ + E +V + Q+ KTGAL A + A AS + E Sbjct: 142 GVGTPLGIIAGQAWEC------EPRVALSDYQRAKTGALFAAATAA---GAQASGGDGET 192 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 R G+ LG +Q+ADD+ D D Sbjct: 193 WRALGDWLGEAYQVADDVRDALAD 216 >gi|51245595|ref|YP_065479.1| octaprenyl-diphosphate synthase [Desulfotalea psychrophila LSv54] gi|50876632|emb|CAG36472.1| related to octaprenyl-diphosphate synthase [Desulfotalea psychrophila LSv54] Length = 336 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 35/205 (17%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 + Y LL GGK+IR LV A L N L R+ E +H +L HDD+ +D+ +R Sbjct: 41 LEYGLLSGGKRIRPLLVLMAARLCGNNGLETYRLATGFEYLHAATLFHDDI--IDHSDLR 98 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--- 158 RG+ ++ ++ AI+AG+ L T A M+ + +G +G Sbjct: 99 RGQESIAKKFGMEAAILAGDFLHTRA-------------------MIFVGEMVGAEGLRR 139 Query: 159 -------MLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 M+ G+ L + Q+ I E + KTG L+ ACE GA+ S+ E Sbjct: 140 FGKATSAMVDGEFLQLRNAQEYNISELDYYRAVMGKTGVLIAAACELGALYGGGSEAEIA 199 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 LR +GE LG FQ+ DDLLD + D Sbjct: 200 ALRSYGEKLGSAFQIVDDLLDYQGD 224 >gi|332287924|ref|YP_004422825.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci 6BC] gi|313848497|emb|CBY17501.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci RD1] gi|325506551|gb|ADZ18189.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci 6BC] gi|328915189|gb|AEB56022.1| geranyltranstransferase [Chlamydophila psittaci 6BC] Length = 293 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 11/203 (5%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + + YAL GGK+IR LV A ++ L AIE IH +LI DDLP MD+ Sbjct: 34 APVEYALTSGGKRIRPMLVCMIAKGLDMGR-DVLDSALAIEFIHTSTLIADDLPCMDDDD 92 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--------NIRSQLMLSLT 151 RRG+PTVH +DE +A++A L+ A+ I +LK + ++ +T Sbjct: 93 ERRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLKSAGVDSKEVDYAYDMISDIT 152 Query: 152 -HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 N G+ G+LGGQ D+ V I KTGAL AC SG + + ++ Sbjct: 153 DKNFGVHGVLGGQYEDMFFNNEGPEHVQSIIHKKTGALFEIACVSGWLFGGGTPECVPQV 212 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 R F + G++FQ+ DD+LD +D Sbjct: 213 REFSQTFGLLFQIKDDILDIHQD 235 >gi|269958400|ref|YP_003328187.1| octaprenyl-diphosphate synthase [Anaplasma centrale str. Israel] gi|269848229|gb|ACZ48873.1| octaprenyl-diphosphate synthase [Anaplasma centrale str. Israel] Length = 327 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 10/184 (5%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK+IR ++ + + + + AAIE IH +L+HDD+ +D RRG T Sbjct: 47 LSGGKRIRPIMLLAVCKMLALQDERRILIAAAIEFIHSATLLHDDV--VDQSESRRGTKT 104 Query: 107 VHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + + +++ G+ LL AF+ ++S +L + +T I Q M+ + L Sbjct: 105 SNSLWGNKASVLVGDFLLATAFQWLVSCSNFELLTTLSRASCTIVTGEI--QQMVYSKSL 162 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 DI E + I KT AL CES +++ +S ++++ L+ FG N GI FQ+ D Sbjct: 163 DITRE-----KYLEIISAKTAALFSATCESAGVLSESSFDDRKALKNFGHNFGITFQIVD 217 Query: 226 DLLD 229 DLLD Sbjct: 218 DLLD 221 >gi|188582094|ref|YP_001925539.1| polyprenyl synthetase [Methylobacterium populi BJ001] gi|179345592|gb|ACB81004.1| Polyprenyl synthetase [Methylobacterium populi BJ001] Length = 288 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 18/221 (8%) Query: 14 KRIDTILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECA-SLFNVNHL 70 +RI+T+LD + +H + RL AIRYA+ GG +IR L A + + + Sbjct: 5 RRIETVLDGAV----AHAEAPGAPPRLAEAIRYAVFPGGHRIRPRLCVAVALACGDDDPA 60 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + AIE +HC SL+HDDLP D+ RR KP+VH + A++ G+ L+ AFE Sbjct: 61 ASDAAAGAIELLHCASLVHDDLPCFDDAATRRQKPSVHAAFGVPLAVLTGDALIVAAFET 120 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI--QKMKTGAL 188 ++ + + + + L G++ GQ + E V ++ Q+ KTGAL Sbjct: 121 LARGAARSPARLAALVGLVARAVGSPSGIVAGQAWE------SEPHVDLVEYQQAKTGAL 174 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A A+ R GE LG +Q+ADDL D Sbjct: 175 F---AAATVAGAAAAGAPPLPWRLLGECLGEAYQVADDLRD 212 >gi|238787578|ref|ZP_04631376.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641] gi|238724365|gb|EEQ16007.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641] Length = 323 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ +R +++ N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMAAATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A++A AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLADASEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|154151748|ref|YP_001405366.1| farnesyltranstransferase [Candidatus Methanoregula boonei 6A8] gi|154000300|gb|ABS56723.1| Farnesyltranstransferase [Methanoregula boonei 6A8] Length = 325 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 11/226 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-S 63 L + L+ +++ID +++ + + + LLSA GGK++R +V A + Sbjct: 8 LSAYLKSVAQQIDGMIEKNFTHAGGELD-RASAHLLSA------GGKRLRPAVVMLSADA 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + + + A+E H ++LIHDD+ MD +RRG PTVH ++D T I+AG+ L Sbjct: 61 IRHGSSKDVMPAALALEVTHTFTLIHDDI--MDGDSLRRGVPTVHTKWDMPTGILAGDVL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 AFE I K +++ +L+ +G + + + +E + M+ K Sbjct: 119 YARAFEFICQSKADEGPKVQAVALLARACADICEGQHQDMSFEHRADVTEEEYMAMVAK- 177 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTG L A G +A + + L FG N GI FQ+ DDL+D Sbjct: 178 KTGVLYAAAAAIGGTLAGGNPEQIRALYQFGLNTGIAFQIQDDLID 223 >gi|62959223|gb|AAY23719.1| farnesyl diphosphate synthase [Prochlorococcus marinus str. SS2] Length = 145 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRGKPT HI + E TA++AG+ L AF +++ +T +R+++ L G GM Sbjct: 12 MRRGKPTTHIAFGEATAVLAGDALHALAFGLLADERTHHDPFVRAEMTACLAKAAGPAGM 71 Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GGQM+D+ E + V +Q++KTGAL+ E GAI+ ++ + LR + +L Sbjct: 72 AGGQMMDLVAEHSTFNLQTVTRLQQLKTGALIAACVEIGAILGRVAEEGRTSLRGYAHDL 131 Query: 218 GIIFQLADDLLDCE 231 G+ FQ+ADD+LD E Sbjct: 132 GLAFQIADDILDVE 145 >gi|167044388|gb|ABZ09065.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote HF4000_APKG6D3] Length = 283 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 23/224 (10%) Query: 14 KRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNH 69 K+I+ +LD +L L T S + ++YAL GGK+IR L +EC + N Sbjct: 20 KKINNVLDSELELYTESEFK--------EPLKYALGGGKRIRPIILLLASECVGEIDDNT 71 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 L A AIE +H S+IHDD+ +DN +RR K HI+Y T+++ G+ +L Sbjct: 72 LAA---ACAIEFLHTESVIHDDI--IDNETLRRQKDPFHIKYGYNTSVLTGDFVLGLILN 126 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 I S +N R L+ T + +G + L+ ++ + + +I+ KT Sbjct: 127 IASRI-----NNPRVTKNLATTAMMMSEGEVIESRLEASEDVTFDDYLKVIE-YKTATAF 180 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A GAI++ ++ E E L +G+N+GI +Q+ DDLLD + + Sbjct: 181 ETASRLGAIISGGTEEEIESLADYGKNIGIAYQIRDDLLDWQNE 224 >gi|163852524|ref|YP_001640567.1| polyprenyl synthetase [Methylobacterium extorquens PA1] gi|163664129|gb|ABY31496.1| Polyprenyl synthetase [Methylobacterium extorquens PA1] Length = 340 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 9/182 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L CA L + A+++ AA+E +H +L+HDD+ +D +RRG+ Sbjct: 58 GGKRLRPILTLACADLCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 115 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 I++ +++ G+ LL AF ++ + +R+ +LS + +G + Q+ Sbjct: 116 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 169 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 ++ E + + + KT L ACE G ++A ++E+ R +G NLGI FQL DD+ Sbjct: 170 KNIETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDV 229 Query: 228 LD 229 LD Sbjct: 230 LD 231 >gi|30249867|ref|NP_841937.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] gi|30180904|emb|CAD85826.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] Length = 322 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A LF+ L + A +E IH +L+HDD+ +D +RR + T + Sbjct: 43 GGKRLRPALVILAAGLFDYKGLHHHNLAAVVEFIHTATLLHDDV--VDESELRRNQATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ N+R +L+ N +G + Q+L+ + Sbjct: 101 ALFGNAASVLVGDFLYSRAFQMMVEVG-----NMRVMEVLADATNTIAEGEVL-QLLNCR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D ++E + + KT L A GAI+ A+ E+E L +G +LG FQL DDLL Sbjct: 155 DPDVEEENYLQVIRFKTAKLFEAAARLGAILGGATPAEEEALAAYGMHLGTAFQLVDDLL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|114330832|ref|YP_747054.1| farnesyltranstransferase [Nitrosomonas eutropha C91] gi|114307846|gb|ABI59089.1| Farnesyltranstransferase [Nitrosomonas eutropha C91] Length = 322 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A L++ + A +E IH +L+HDD+ +D +RR + T + Sbjct: 43 GGKRLRPALVILAAGLYDYKGTHHYNLAAVVEFIHTATLLHDDV--VDESQLRRNQATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ DN+R +L+ N +G + Q+L+ + Sbjct: 101 ALFGNAASVLVGDFLYSRAFQMMVEV-----DNMRVMEVLADATNTIAEGEVL-QLLNCR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D ++E + + KT L A GAI+ A+ E+E L +G +LG FQL DDLL Sbjct: 155 DPDVEEENYLQVIRFKTAKLFEAAGRLGAILGGATPAEEEALAAYGMHLGTAFQLVDDLL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|240139858|ref|YP_002964335.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1] gi|240009832|gb|ACS41058.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1] Length = 340 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 9/182 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L CA L + A+++ AA+E +H +L+HDD+ +D +RRG+ Sbjct: 58 GGKRLRPILTLACADLCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 115 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 I++ +++ G+ LL AF ++ + +R+ +LS + +G + Q+ Sbjct: 116 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 169 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 ++ E + + + KT L ACE G ++A ++E+ R +G NLGI FQL DD+ Sbjct: 170 KNIETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDV 229 Query: 228 LD 229 LD Sbjct: 230 LD 231 >gi|254562277|ref|YP_003069372.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4] gi|254269555|emb|CAX25521.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4] Length = 340 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 9/182 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L CA L + A+++ AA+E +H +L+HDD+ +D +RRG+ Sbjct: 58 GGKRLRPILTLACADLCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 115 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 I++ +++ G+ LL AF ++ + +R+ +LS + +G + Q+ Sbjct: 116 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 169 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 ++ E + + + KT L ACE G ++A ++E+ R +G NLGI FQL DD+ Sbjct: 170 KNIETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDV 229 Query: 228 LD 229 LD Sbjct: 230 LD 231 >gi|254464181|ref|ZP_05077592.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I] gi|206685089|gb|EDZ45571.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I] Length = 328 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 9/206 (4%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + M ++H R+ + + GGK++R L A + +++ A +E IH +L Sbjct: 26 TRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYEGDHHVKLAATVEFIHTATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D RRG+PT ++ +D ++++ G+ L +F+++ ++ +I + Sbjct: 86 LHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETESLRVLDILANAS 143 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 ++ LQ M + DE + + KT AL A E G ++A A + + Sbjct: 144 ATIAEGEVLQ------MTAASNLKTDEGIYLQVVRGKTAALFSAATEVGGVIAGAPETQV 197 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 + L +G+ LGI FQ+ADDLLD + D Sbjct: 198 KALFEYGDALGIAFQIADDLLDYQGD 223 >gi|50119637|ref|YP_048804.1| octaprenyl diphosphate synthase [Pectobacterium atrosepticum SCRI1043] gi|49610163|emb|CAG73603.1| octaprenyl-diphosphate synthase [Pectobacterium atrosepticum SCRI1043] Length = 323 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALAYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S +++R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTS-----LESLRVLALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S +I+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|238650786|ref|YP_002916641.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic] gi|238624884|gb|ACR47590.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic] Length = 371 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 124/227 (54%), Gaps = 20/227 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65 K+Q++ K T L++L++ + ++ L+ + LL GGK+IR L A +F Sbjct: 50 KIQQDLKDEVTKLNNLIISC-----LKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 104 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + Sbjct: 105 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 162 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182 +F+++ + + I++ +L+ I +G + Q++ + + IDE Q I K Sbjct: 163 QSFKLMVASGS-----IKAMNVLAKASAIISEGEVV-QLVKLNERRIITIDEYQ--QIVK 214 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L AC GAI+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 215 SKTAELFGTACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLD 261 >gi|299538563|ref|ZP_07051846.1| heptaprenyl diphosphate synthase component II [Lysinibacillus fusiformis ZC1] gi|298726150|gb|EFI66742.1| heptaprenyl diphosphate synthase component II [Lysinibacillus fusiformis ZC1] Length = 324 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 20/188 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + + V +E IH SL+HDD+ +D+ +RRG+PTV Sbjct: 46 GGKRIRPIFVLLGAKFGDYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVK 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML---GGQML 165 Q++ A+ G+ + A E I T+L+D L H I + M+ G+++ Sbjct: 104 SQWNNRVAMYTGDFIFARALEYI----TKLED--------PLVHQILARTMVEICNGEVI 151 Query: 166 DIQDEF-IDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 I+D+F +D+ F K KT L+ +CE GA+ A L+ FG +G+ FQ Sbjct: 152 QIEDKFRLDQGLKDYFRRIKRKTALLISSSCELGAVAAGVDTKTVRHLKRFGYFVGMSFQ 211 Query: 223 LADDLLDC 230 + DD+LD Sbjct: 212 IIDDVLDI 219 >gi|86751112|ref|YP_487608.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2] gi|86574140|gb|ABD08697.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2] Length = 287 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 19/192 (9%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL +A+R A+ G ++R L A+ ++ GAA+E +HC SL+HDDLP D Sbjct: 26 RLAAAMRSAVFPRGARVRPRLCHSVAAACGDDNPATEAAGAALELMHCASLVHDDLPCFD 85 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 IRRG+P+VH + E A++ G+ L+ AF+ I+ + N +L LT IG Sbjct: 86 GADIRRGRPSVHKAFGEPLAVLTGDALIVLAFQTIA------RVNCAPDRLLKLTQVIGS 139 Query: 157 Q-----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G++ GQ + + E + + KTGAL + A A ++ + E R Sbjct: 140 AVGVPLGIVAGQAWECESEI----NLAHYHRSKTGALFVA---ATAAGAASAGADPEPWR 192 Query: 212 CFGENLGIIFQL 223 GE +G +Q+ Sbjct: 193 MVGEKIGEAYQV 204 >gi|313205981|ref|YP_004045158.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868] gi|312445297|gb|ADQ81652.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868] gi|325336579|gb|ADZ12853.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer RA-GD] Length = 323 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 13/186 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V LF + A++ AIE H ++LIHDD+ MD+ +RR KPT+H Sbjct: 38 GGKRLRPIMVLMGCELFGGSLEKAMKPALAIEFFHNFTLIHDDI--MDDAPLRRNKPTIH 95 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + I++G+ LL A++ + +L + + S T + + GQ +D+ Sbjct: 96 TLHGINVGILSGDALLIKAYQFFEDLEPELFK--KCITLFSETGAV----LCEGQQMDVN 149 Query: 169 DE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E E + MI KTG L + + GA++A A++ E E L FG+++GI FQ+ Sbjct: 150 FETNSNVTYEDYIKMIT-YKTGVLSAASFKIGAMIAGATEQEAEALYQFGKHIGIAFQIM 208 Query: 225 DDLLDC 230 DD LD Sbjct: 209 DDYLDV 214 >gi|62959225|gb|AAY23720.1| farnesyl diphosphate synthase [Prochlorococcus marinus str. CCMP1377] Length = 145 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 2/133 (1%) Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT HI + E TA++AG+ L AF +++ +T +R+++ L G GM Sbjct: 13 RRGKPTTHIAFGEATAVLAGDALHALAFGLLADERTHHDPFVRAEMTACLAKAAGPAGMA 72 Query: 161 GGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GGQM+D+ E + V +Q++KTGAL+ E GAI+ ++ + LR + +LG Sbjct: 73 GGQMMDLVAEHSTFNLQTVTRLQQLKTGALIAACVEIGAILGRVAEEGRTSLRGYAHDLG 132 Query: 219 IIFQLADDLLDCE 231 + FQ+ADD+LD E Sbjct: 133 LAFQIADDILDVE 145 >gi|317495880|ref|ZP_07954243.1| polyprenyl synthetase [Gemella moribillum M424] gi|316914057|gb|EFV35540.1| polyprenyl synthetase [Gemella moribillum M424] Length = 320 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 22/206 (10%) Query: 33 TQHNDRLLSAI--RYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLI 88 T+ +D+ L+ I Y L GGK++R L+ CA+L F N +R+ + +E IH SLI Sbjct: 24 TRSDDKKLNTIIKEYFLNGGKRVRVLLLLICANLGDFEKNKKNIIRIASIVEIIHTASLI 83 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D RRG+ T+ Y E A+ G+ Y F + + KD R + L Sbjct: 84 HDDI--IDKAKTRRGQTTMSRAYGEEYALYVGD----YLFATVLREIAEFKDE-RLHMYL 136 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCFACESGAIMAHAS 203 S T L+ + G++ IQ+E + T K KT L+ FA +G+I++ AS Sbjct: 137 SNT----LKELCIGEI--IQEEGLYNIRTRRTDYLKKIKRKTAILIAFATSAGSIVSCAS 190 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229 +R FG LG+ +Q+ DD LD Sbjct: 191 NENIQRSYAFGYYLGMSYQIIDDYLD 216 >gi|116622453|ref|YP_824609.1| geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076] gi|116225615|gb|ABJ84324.1| Geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076] Length = 333 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A L +A+++GA +E IH +L+HDD+ +D RRG+P+ + Sbjct: 52 GGKRLRPALLLLSAKLVGNGGPSAIQLGAVVELIHAATLVHDDV--IDTAQTRRGRPSTN 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDI 167 +++ T ++AG+ L AF+I L++ RS ML L IGL Q M+ G++L + Sbjct: 110 VKWGNHTCVLAGDWLYMQAFQI------ALRE--RSFQMLDLL--IGLTQMMVEGELLQL 159 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + E + KT L G + H +E+L + NLG+ FQL Sbjct: 160 ERIGRINVSEADCMELVDRKTACLFSVCARLGGLCGHTDPQTQEKLGEYAWNLGMAFQLV 219 Query: 225 DDLLD 229 DD+LD Sbjct: 220 DDVLD 224 >gi|256379027|ref|YP_003102687.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827] gi|255923330|gb|ACU38841.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827] Length = 346 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 89/187 (47%), Gaps = 11/187 (5%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV A AL A+E +H +SL+HDD+ MD RR +PT Sbjct: 62 GKAIRPVLVLLAARAVGGRAEDALPAAVAVELVHNFSLLHDDV--MDGDATRRHRPTAWA 119 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++AG+ L+T A ++++ + R ++LS +Q +L GQ D+ Sbjct: 120 VFGVNAAVLAGDALMTLALDVLAG--SGHPAAARGIVLLSAA----VQELLDGQSSDLGF 173 Query: 170 EFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E DE V +M KT AL+ C GA+ S ++ L FGE G+ FQ DD Sbjct: 174 EERDEVGVAECVRMAEGKTAALLGACCSLGALFGGGSADQVGELGLFGERTGLAFQFVDD 233 Query: 227 LLDCEED 233 LL D Sbjct: 234 LLGIWGD 240 >gi|229586816|ref|YP_002845317.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5] gi|228021866|gb|ACP53574.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5] Length = 371 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 103/184 (55%), Gaps = 13/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L A +F+ +++ +A+E IH +L+HDD+ +D+ +RR KPT + Sbjct: 88 GGKRIRPLLTIITAKMFDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTAN 145 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + T+I+ G+ L + +F+++ + + I++ +L+ I +G + Q++ + Sbjct: 146 VIWGSKTSILVGDFLFSQSFKLMVASGS-----IKAMNVLAKASAIISEGEVV-QLVKLN 199 Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + IDE Q I K KT L AC GAI+A + + ++ FG+ LG IFQ+ D Sbjct: 200 ERRIITIDEYQ--QIVKSKTAELFGTACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVID 257 Query: 226 DLLD 229 DLLD Sbjct: 258 DLLD 261 >gi|329889422|ref|ZP_08267765.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC 11568] gi|328844723|gb|EGF94287.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC 11568] Length = 367 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 14/185 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R L A + A+ ++ A++E IH +L+HDD+ +D +RRGK Sbjct: 84 GGKRLRPLLTVAAAR--AIGQTGAIDGPKKLAASVEFIHTATLLHDDI--VDGSEMRRGK 139 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 H+ + ++++ G+ L AFE++ D++R+ +L+ + +G + Q+ Sbjct: 140 VAAHLIWGSASSVLVGDFLFARAFELMVE-----TDSLRALGILARASAVIAEGEVL-QL 193 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D +D I + KT L A ESGA+ A A+ + LR +G LGI FQLA Sbjct: 194 TRAHDLNLDLDTYLQIIRAKTAELFAAAAESGAVGAGATDEQVAALRDYGMALGIAFQLA 253 Query: 225 DDLLD 229 DD LD Sbjct: 254 DDALD 258 >gi|323704336|ref|ZP_08115915.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536402|gb|EGB26174.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 319 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 117/226 (51%), Gaps = 21/226 (9%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 ++E+ K+ID + + + ++ +D +LS GGK+IR LV A + + Sbjct: 8 VKEDMKKIDEFILANVKTNSPTIKKAIDDLVLS-------GGKRIRPLLVIAIARMGEYS 60 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + A+IE +H +LIHDD+ +D+ +RRG+ +V +Y + TA+ G+ L + AF Sbjct: 61 EEKIIPIAASIEIMHMATLIHDDI--IDDSKMRRGQKSVQSKYGKETAVFTGDFLFSQAF 118 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KT 185 +I+ +I S+ L L G++ + G++ + + +D + ++++ KT Sbjct: 119 NLIA--------DIISKENLKLIAK-GVKAICEGEIEQFDNRYNLDLSIKKYLKRIYRKT 169 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L +CESGA A + +R FG +G FQ+ DD+LD E Sbjct: 170 ALLFAISCESGASQAGLPKEMIRAMRHFGLEIGTAFQIVDDILDYE 215 >gi|156937956|ref|YP_001435752.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I] gi|156566940|gb|ABU82345.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I] Length = 327 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 14/185 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV AL AA+E +H ++L+HDD+ MD +RRG PTVH Sbjct: 41 GGKRLRPALVLLVNKALGGEVEGALPAAAAVELLHNFTLVHDDI--MDRDELRRGVPTVH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + Y E AI+AG+ L A+E ++ SP+ ++ ++ LT + + GQ +D+ Sbjct: 99 VLYGESMAILAGDLLYAKAYEALLQSPQPP---DLVKEMTEVLTWSA--VTVAEGQAMDM 153 Query: 168 QDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + E +E + MI+K KTGAL + GA+ A+ + K+ ++ FG LG FQ+ Sbjct: 154 EFEKRWDVTEEEYLEMIEK-KTGALFGASAALGALTANKREV-KDLMKEFGLILGKAFQI 211 Query: 224 ADDLL 228 DD+L Sbjct: 212 KDDVL 216 >gi|15892647|ref|NP_360361.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7] gi|15619817|gb|AAL03262.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7] Length = 371 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 122/226 (53%), Gaps = 18/226 (7%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65 K+Q++ K T L++L++ + ++ L+ + LL GGK+IR L A +F Sbjct: 50 KIQQDLKDEVTKLNNLIISC-----LKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 104 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + Sbjct: 105 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 162 Query: 126 YAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 +F+++ + + N+ ++ ++S + L + +++ I DE Q I K Sbjct: 163 QSFKLMVASGSIKAMNVLAKASAIISAGEVVQLVKLNERRIITI-----DEYQ--QIVKS 215 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L AC GAI+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 216 KTAELFGTACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLD 261 >gi|92112606|ref|YP_572534.1| trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM 3043] gi|91795696|gb|ABE57835.1| Trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM 3043] Length = 337 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N + + IE +H +L+HDD+ +D ++RRGK T + Sbjct: 58 GGKRLRPLLVLLAARSLNYPGDRHVTLATLIEFMHTSTLLHDDV--VDESHLRRGKATAN 115 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ ++R +LS + +G + Q+ +I Sbjct: 116 DAWGNAPSVLVGDFLYSRSFQMMVE-----VGSMRVMEILSGATCVIAEGEVL-QLTNIG 169 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + IDE F + KT L A SGA++A A+ ++E L+ +G LG+ FQL DDLL Sbjct: 170 NPDIDEAAYFDTIQGKTAMLFEAASHSGAVLAEATPAQEEALKLYGRYLGLAFQLVDDLL 229 Query: 229 DCEED 233 D + D Sbjct: 230 DYQGD 234 >gi|308388198|pdb|3OYR|A Chain A, Crystal Structure Of Polyprenyl Synthase From Caulobacter Crescentus Cb15 Complexed With Calcium And Isoprenyl Diphosphate gi|308388199|pdb|3OYR|B Chain B, Crystal Structure Of Polyprenyl Synthase From Caulobacter Crescentus Cb15 Complexed With Calcium And Isoprenyl Diphosphate Length = 345 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A L ++ ++ AA+E IH +L+HDD+ +D +RRGK H Sbjct: 64 GGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAH 121 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ L AFE++ +++++ +L+ + +G + Q++ Sbjct: 122 LIWGGAQSVLVGDFLFARAFELMVE-----TNSMKALEILARASRVIAEGEVL-QLMRSH 175 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + I + KT L A E+GA+ A + E LR +G NLG+ FQLADD L Sbjct: 176 DLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDAL 235 Query: 229 D 229 D Sbjct: 236 D 236 >gi|304570808|ref|YP_002517571.2| trans-isoprenyl diphosphate synthase [Caulobacter crescentus NA1000] Length = 336 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A L ++ ++ AA+E IH +L+HDD+ +D +RRGK H Sbjct: 55 GGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAH 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ L AFE++ +++++ +L+ + +G + Q++ Sbjct: 113 LIWGGAQSVLVGDFLFARAFELMVE-----TNSMKALEILARASRVIAEGEVL-QLMRSH 166 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + I + KT L A E+GA+ A + E LR +G NLG+ FQLADD L Sbjct: 167 DLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDAL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|258542159|ref|YP_003187592.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256633237|dbj|BAH99212.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256636296|dbj|BAI02265.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-03] gi|256639349|dbj|BAI05311.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-07] gi|256642405|dbj|BAI08360.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-22] gi|256645460|dbj|BAI11408.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-26] gi|256648513|dbj|BAI14454.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-32] gi|256651566|dbj|BAI17500.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654557|dbj|BAI20484.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-12] Length = 356 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 12/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNH----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R L A + N+ + + + A +E IH +L+HDD+ +D+ +RRG Sbjct: 71 GGKRLRPLLTLAAARMCGYNNQDGRMRHVEIAACVEFIHTATLLHDDV--VDDSQLRRGL 128 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + + + +++ G+ L +F+I+++ + I S +L +Q M Sbjct: 129 ASANAIFGNKASVLVGDFLFARSFQILTADASLGVMAILSAASATLAEGEVMQ------M 182 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D Q + KT AL ACESGA++ A+ ++E LR +G NLG+ FQL Sbjct: 183 TTQNDLSTSVEQYLQVIYGKTAALFAAACESGAVIGEATPEQREALRMYGANLGMAFQLV 242 Query: 225 DDLLDCEED 233 DD LD D Sbjct: 243 DDALDYAAD 251 >gi|16126352|ref|NP_420916.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15] gi|13423600|gb|AAK24084.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15] Length = 338 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A L ++ ++ AA+E IH +L+HDD+ +D +RRGK H Sbjct: 57 GGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAH 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ L AFE++ +++++ +L+ + +G + Q++ Sbjct: 115 LIWGGAQSVLVGDFLFARAFELMVE-----TNSMKALEILARASRVIAEGEVL-QLMRSH 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + I + KT L A E+GA+ A + E LR +G NLG+ FQLADD L Sbjct: 169 DLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|90109651|pdb|2FTZ|A Chain A, Crystal Structure Of Geranyltranstransferase (Ec 2.5.1.10) (Tm0161) From Thermotoga Maritima At 1.90 A Resolution Length = 284 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 79/184 (42%), Gaps = 8/184 (4%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 A +GG +IR LV V L V A+E H SLIHDDLP +DN RRG P Sbjct: 42 ATVGGXRIRPLLVLTLGEDLGVEEEXLLDVAVAVELFHTASLIHDDLPPIDNADFRRGXP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + H Y E A++AG+GL AF IS S+ L + + + Sbjct: 102 SCHRTYGEDIALLAGDGLFFLAFSQISXIGNSXIFEEFSETAYXLLLGEAMDVEFERRXM 161 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ E ++ F TGAL F + I+ + GE G+ FQ+ D Sbjct: 162 EVSQEMVERMYAF-----XTGALFAFCFSAPFILXGXDHT---XMXLLGEXFGVAFQIYD 213 Query: 226 DLLD 229 DL D Sbjct: 214 DLXD 217 >gi|304311022|ref|YP_003810620.1| Polyprenyl synthetase [gamma proteobacterium HdN1] gi|301796755|emb|CBL44967.1| Polyprenyl synthetase [gamma proteobacterium HdN1] Length = 322 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV H LR+ A IE +H +L+HDD+ +D +RRG+ T Sbjct: 43 GGKRLRPLLVLLGGRAVGY-HKEDLRILAATIELLHTATLLHDDV--VDKSGLRRGRATA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + Q+ +++ G+ L + +FE++ I SQ + LQ + + Sbjct: 100 NAQWGNAPSVLVGDYLYSRSFEMMVGLGNMPVMKILSQATRIMAEGEALQ------LSRV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E I + KT L+ + S A++A A+ E+ LR FGE+LGI FQL DD+ Sbjct: 154 RDVSTSEETYMQIIRSKTSVLLEASSHSAAVLASATDYERHALRGFGEHLGIAFQLIDDV 213 Query: 228 LDCEED 233 LD D Sbjct: 214 LDFRGD 219 >gi|239947339|ref|ZP_04699092.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921615|gb|EER21639.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes scapularis] Length = 326 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 103/182 (56%), Gaps = 9/182 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L A +F+ +++ +A+E IH +L+HDD+ +D+ +RR KPT + Sbjct: 43 GGKRIRPLLTIITAKMFDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + T+I+ G+ L + +F+++ + + I++ +L+ I +G + Q++ + Sbjct: 101 IIWGSKTSILVGDFLFSQSFKLMIASGS-----IKAMNVLAKASAIISEGEVV-QLVKLN 154 Query: 169 DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + I + + I K KT L +CE GAI+A + + ++ FG+ LG IFQ+ DDL Sbjct: 155 ERRIITIEEYQQIVKSKTAELFGASCEVGAIIAEQLDHVSKDMQDFGKLLGTIFQVIDDL 214 Query: 228 LD 229 LD Sbjct: 215 LD 216 >gi|325859901|ref|ZP_08173031.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A] gi|327312867|ref|YP_004328304.1| polyprenyl synthetase [Prevotella denticola F0289] gi|325482827|gb|EGC85830.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A] gi|326945844|gb|AEA21729.1| polyprenyl synthetase [Prevotella denticola F0289] Length = 326 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 18/221 (8%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT 71 + ID LDD + +H H D LL + + GK++R L+ A F Sbjct: 9 RPIDVELDDFI-DLFNHA-LDHEDGLLQTVLNHIRQRAGKRMRPILILLIAKNFGKVSEA 66 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 +E +H SL+HDD+ +D RRG+ +V+ YD A++ G+ +L+ A + Sbjct: 67 TQHAAVGLELLHTASLVHDDV--VDESAERRGQASVNADYDNKVAVLVGDYVLSTALLYV 124 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---DIQDEFIDETQVFMIQKMKTGAL 188 S + S+ ++ +G Q + G++L +IQ + I E + I + KT AL Sbjct: 125 S--------HTHSEAIVRRLAGLG-QTLSDGEILQLSNIQCKDITEEAYYRIIERKTAAL 175 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA+ A AS+ E + RCFG+NLGI+FQ+ DD+ D Sbjct: 176 FEACAAIGAVSAGASEEEVDAARCFGKNLGIVFQIRDDIFD 216 >gi|303326545|ref|ZP_07356988.1| decaprenyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3] gi|302864461|gb|EFL87392.1| decaprenyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3] Length = 323 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 20/187 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A L + +E +H +L+HDD+ +DN RRGKP H Sbjct: 43 GGKRLRPLLVVLTARLLGYERADIYDLAVTMEMLHAATLLHDDV--LDNAASRRGKPAAH 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 +D I+AG+ LL A +++ P+ LSL + G++L Sbjct: 101 TIFDVTPTILAGDALLAQANALVAGFGDPR------------LSLCFSEATSRTAAGEIL 148 Query: 166 DIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 +I + +T + I + KT L+ +C+ GA+ A + + E +GENLG+ FQ Sbjct: 149 EIAAQRRVDTSAEEYAEIVRGKTAWLIRASCQLGALRAGGTDAQVEAAAAYGENLGMAFQ 208 Query: 223 LADDLLD 229 + DD LD Sbjct: 209 MVDDALD 215 >gi|254284097|ref|ZP_04959065.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B] gi|219680300|gb|EED36649.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B] Length = 321 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + +R A +E IH +L+HDD+ +D +RRG+PT + Sbjct: 42 GGKRLRPLLVLLAGEALGGCTESHIRFSAVVEFIHTATLLHDDV--VDVSTLRRGRPTAN 99 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AF+++ QL + + M T+ I +L Q+ Sbjct: 100 EAFGNAPSVLVGDFLYTRAFQLM----VQLDNMDLLRHMADTTNTIAEGEVL--QLARAG 153 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + IDE+Q + KT L AC+ A++A+ ++ L +G NLGI FQ+ DD+L Sbjct: 154 NPDIDESQYIDVITRKTAILFASACQGAAMLANCDIKTQQALSQYGLNLGIAFQMIDDVL 213 Query: 229 DCEED 233 D E D Sbjct: 214 DYEGD 218 >gi|120553786|ref|YP_958137.1| farnesyltranstransferase [Marinobacter aquaeolei VT8] gi|120323635|gb|ABM17950.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Marinobacter aquaeolei VT8] Length = 322 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 99/185 (53%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + L++ A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLASQAAGYQKDDHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ L AFE++ ++ N+ S + +Q +++++ Sbjct: 101 AKWGNAPSVLVGDFLYARAFEMMVELQSLPIMNVLSHATAVIAEGEVMQ------LMNVK 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + E Q ++ KT L A +GA++A AS+ ++ L+ +G++LG+ FQL DD+L Sbjct: 155 NPDLSEDQYMVVIHNKTAMLFEAASHTGALLAKASKEQETALKDYGKHLGLAFQLVDDVL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYQGD 219 >gi|329113331|ref|ZP_08242112.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001] gi|326697156|gb|EGE48816.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001] Length = 356 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 12/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNH----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R L A + N+ + + + A +E IH +L+HDD+ +D+ +RRG Sbjct: 71 GGKRLRPLLTLAAARMCGYNNQDGRMRHVEIAACVEFIHTATLLHDDV--VDDSQLRRGL 128 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + + + +++ G+ L +F+I+++ + I S +L +Q M Sbjct: 129 ASANAIFGNKASVLVGDFLFARSFQILTADASLGVMAILSAASATLAEGEVMQ------M 182 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D Q + KT AL ACESGA++ A+ ++E LR +G NLG+ FQL Sbjct: 183 TTQNDLSTSVDQYLQVIYGKTAALFAAACESGAVIGEATPEQREALRMYGANLGMAFQLV 242 Query: 225 DDLLDCEED 233 DD LD D Sbjct: 243 DDALDYAAD 251 >gi|169827495|ref|YP_001697653.1| heptaprenyl diphosphate synthase component II [Lysinibacillus sphaericus C3-41] gi|168991983|gb|ACA39523.1| Heptaprenyl diphosphate synthase component II [Lysinibacillus sphaericus C3-41] Length = 324 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 20/188 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + V +E IH SL+HDD+ +D+ +RRG+PTV Sbjct: 46 GGKRIRPIFVLLGAKFGEYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVK 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML---GGQML 165 Q++ A+ G+ + A E I T+L+D L H I + M+ G+++ Sbjct: 104 AQWNNRVAMYTGDFIFARALEYI----TKLED--------PLVHQILARTMVEICNGEVI 151 Query: 166 DIQDEF-IDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 I+D+F +D+ F K KT L+ +CE GA+ A L+ FG +G+ FQ Sbjct: 152 QIEDKFRLDQGLKDYFRRIKRKTALLISSSCELGAVAAGVDAKTVRHLKRFGYFVGMSFQ 211 Query: 223 LADDLLDC 230 + DD+LD Sbjct: 212 IIDDVLDI 219 >gi|71083319|ref|YP_266038.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique HTCC1062] gi|91762251|ref|ZP_01264216.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique HTCC1002] gi|71062432|gb|AAZ21435.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique HTCC1062] gi|91718053|gb|EAS84703.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique HTCC1002] Length = 337 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 17/192 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R+ L A L + + A +E IH +L+HDD+ +D G IRRGK T+ Sbjct: 55 GGKRLRALLTLGSAKLCGYTKGGRDINLAACVEMIHGATLMHDDV--IDLGNIRRGKKTL 112 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + ++++ G+ LL+ FE++ NI +LS T + QG ++L + Sbjct: 113 NSIWGNHSSVLIGDYLLSRCFEMMVDD-----GNIEVLKLLSSTSSKIAQG----EVLQL 163 Query: 168 QD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 Q + ++ET F I KT L A + GAI+++ EKE L +G+NLG+ FQ+ Sbjct: 164 QHKGEVDMLEET-YFKIITAKTAELFSAATKVGAILSNKETKEKEALEFYGKNLGLTFQI 222 Query: 224 ADDLLDCEEDLP 235 ADD LD DL Sbjct: 223 ADDTLDYNSDLK 234 >gi|238918407|ref|YP_002931921.1| hypothetical protein NT01EI_0448 [Edwardsiella ictaluri 93-146] gi|238867975|gb|ACR67686.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 323 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A L + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAILAARTLGYQGDHHLTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRILALMSEATNVIAEGEVQ-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+A A +++ L+ +G LG FQL DDLL Sbjct: 155 DPDISEENYMQVIYSKTARLFEAAAQCSAILAGADPAQEQALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|193214123|ref|YP_001995322.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110] gi|193087600|gb|ACF12875.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110] Length = 335 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 24/202 (11%) Query: 45 YALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 Y L G GK++R LV A AL + ++E +H ++LIHDD+ MDN +R G Sbjct: 46 YILTGKGKRVRPVLVLLGAESICGTSDHALNLALSVEVLHNFTLIHDDI--MDNAALRHG 103 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 + TVH++++E AI++G+ +L +A+E+ SS T++ D I ++ + Sbjct: 104 RETVHLKWNENAAILSGDMMLAFAYELALKTNSSRLTKILDVITQSTIV----------I 153 Query: 160 LGGQMLDIQDEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERLRCFG 214 GQ D+ +F T V M + + KTG L+ + E G + A A+ + L +G Sbjct: 154 CEGQTYDM--DFEKRTDVTMSEYLDMISKKTGRLIAASLELGGLAAEATDEQLAILTEYG 211 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 E +G FQ+ DDLLD D K Sbjct: 212 ELIGQAFQVQDDLLDIMADDKK 233 >gi|269137746|ref|YP_003294446.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202] gi|267983406|gb|ACY83235.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202] gi|304557803|gb|ADM40467.1| Octaprenyl-diphosphate synthase [Edwardsiella tarda FL6-60] Length = 323 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALGYQGDRHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRILALMSEATNVIAEGEVQ-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+A A +++ L+ +G LG FQL DDLL Sbjct: 155 DPDISEENYMQVIYSKTARLFEAAAQCSAILAGADTAQEQALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|315022294|gb|EFT35322.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM] Length = 323 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 13/186 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V LF + A++ AIE H ++LIHDD+ MD +RR KPT+H Sbjct: 38 GGKRLRPIMVLMGCELFGGSLEKAMKPALAIEFFHNFTLIHDDI--MDGAPLRRNKPTIH 95 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + I++G+ LL A++ + +L + + S T + + GQ +D+ Sbjct: 96 TLHGINVGILSGDALLIKAYQFFEDLEPELFK--KCITLFSETGAV----LCEGQQMDVN 149 Query: 169 DE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E E + MI KTG L + + GA++A A++ E E L FG+++GI FQ+ Sbjct: 150 FETNSNVTYEDYIKMIT-YKTGVLSAASFKIGAMIAGATEQEAEALYQFGKHIGIAFQIM 208 Query: 225 DDLLDC 230 DD LD Sbjct: 209 DDYLDV 214 >gi|83952381|ref|ZP_00961112.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM] gi|83836054|gb|EAP75352.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM] Length = 333 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 9/209 (4%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + M ++H R+ + + GGK++R L A++ R+ A +E IH +L Sbjct: 31 ARMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAAICGYEGDHDERLAATVEFIHTATL 90 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D RRG+PT ++ +D ++++ G+ L + +F+++ + +I + Sbjct: 91 LHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRVLDILANAS 148 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 ++ LQ + +D E + + KT AL A E G ++A AS Sbjct: 149 ATIAEGEVLQ------LTASRDIATTEATYLQVVRGKTAALFSAATEVGGVIAGASDEVT 202 Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L +G+ LGI FQ+ADDLLD + D K Sbjct: 203 GALYDYGDALGIAFQIADDLLDFQGDSAK 231 >gi|220964307|gb|ACL95663.1| trans-isoprenyl diphosphate synthase [Caulobacter crescentus NA1000] Length = 322 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A L ++ ++ AA+E IH +L+HDD+ +D +RRGK H Sbjct: 41 GGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ L AFE++ +++++ +L+ + +G + Q++ Sbjct: 99 LIWGGAQSVLVGDFLFARAFELMVET-----NSMKALEILARASRVIAEGEVL-QLMRSH 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + I + KT L A E+GA+ A + E LR +G NLG+ FQLADD L Sbjct: 153 DLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDAL 212 Query: 229 D 229 D Sbjct: 213 D 213 >gi|188582542|ref|YP_001925987.1| polyprenyl synthetase [Methylobacterium populi BJ001] gi|179346040|gb|ACB81452.1| Polyprenyl synthetase [Methylobacterium populi BJ001] Length = 351 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 9/182 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L CA L A+++ AA+E +H +L+HDD+ +D +RRG+ Sbjct: 69 GGKRLRPILTLACADLCGYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 126 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 I++ +++ G+ LL AF ++ + +R+ +LS + +G + Q+ Sbjct: 127 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 180 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 ++ E + + + KT L ACE G +++ + E+ R +G NLGI FQL DD+ Sbjct: 181 KNTETSEDEYLAVIRGKTAELFAAACEVGPVLSQRPEAEQAACRAYGMNLGIAFQLIDDV 240 Query: 228 LD 229 LD Sbjct: 241 LD 242 >gi|221640208|ref|YP_002526470.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131] gi|221160989|gb|ACM01969.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131] Length = 331 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 9/200 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + A +E IH +L+H Sbjct: 31 MASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLAATVEFIHTATLLH 90 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D + RRGKPT ++ +D ++++ G+ L +F+++ + +I + + Sbjct: 91 DDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVMDILANASAT 148 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 ++ LQ + QD E + + KT AL A + G ++A + + E Sbjct: 149 ISEGEVLQ------LTAAQDLRTTEDIYLQVVRGKTAALFAAATQVGGVVAGMPEAQVEA 202 Query: 210 LRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 203 LHAYGDALGIAFQIVDDLLD 222 >gi|294678700|ref|YP_003579315.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003] gi|77862362|gb|ABB04465.1| decaprenyl diphosphate synthase [Rhodobacter capsulatus] gi|294477520|gb|ADE86908.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003] Length = 333 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 9/200 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + A +E IH +L+H Sbjct: 33 MSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYGGPFHVHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L +F++++ N+R +L+ Sbjct: 93 DDV--VDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTD-----TGNMRVMEILA 145 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + +G + Q+ Q+ E + + KT AL A E G I+ A +++ + Sbjct: 146 NASAVIAEGEVL-QLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGIIGGAPEDQVQA 204 Query: 210 LRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 205 LFDYGDALGIAFQIVDDLLD 224 >gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata] Length = 205 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 2/136 (1%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGKPT HI Y E A++AG+ LL+++FE I++ + + + + L IG Sbjct: 1 NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHITTATKGVSSDRILRAIGELAKCIGS 60 Query: 157 QGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +G++ GQ++D+ E D + I KT AL+ + GAIM S E E+LR F Sbjct: 61 EGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120 Query: 215 ENLGIIFQLADDLLDC 230 ++G++FQ+ DD+LD Sbjct: 121 RSIGLLFQVVDDILDV 136 >gi|218781076|ref|YP_002432394.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01] gi|218762460|gb|ACL04926.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01] Length = 325 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 21/194 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + N+ + + E +H +L+HDD+ +D RRGK H Sbjct: 44 GGKRLRPVLMVLSARVCGCNNGEEINLSTVFEYLHAATLLHDDI--VDGAETRRGKIAAH 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG------LQGMLGG 162 +D ++ G+ LL+ I + D + ++ +T+ G +Q +L Sbjct: 102 KVWDPAEVVLTGDFLLSRTCTIAA-------DTDKLPIIKVITNVTGVMSEGEIQQLLNK 154 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + LD+ +E Q + KT L+ ACE GA++A A + E L+ +G +LGI FQ Sbjct: 155 KRLDLSEE-----QYMDVIYRKTAVLISAACEVGALLADAPPEQVEALKEYGRHLGIAFQ 209 Query: 223 LADDLLDCEEDLPK 236 +ADDLLD D PK Sbjct: 210 MADDLLDYVAD-PK 222 >gi|73666686|ref|YP_302702.1| trans-hexaprenyltrans transferase [Ehrlichia canis str. Jake] gi|72393827|gb|AAZ68104.1| Trans-hexaprenyltrans transferase [Ehrlichia canis str. Jake] Length = 325 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 13/202 (6%) Query: 33 TQHNDR---LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 +QH+D+ L++ I + L+ GGK+IR + + N + + + AAIE IH +L Sbjct: 28 SQHSDKHIALITEIIHHLIKSGGKRIRPIIFFIICKMLNCTNENKILIAAAIEFIHNATL 87 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D +RRGK T + + +I+ G+ LL +F+ + K N+ + Sbjct: 88 LHDDV--IDESDLRRGKKTSNFIWGNKASILVGDFLLAISFQWLIECK-----NLNILSI 140 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 LS T N + G + QML + I + + I KT +L CES A +A + E Sbjct: 141 LSQTSNTIVVGEIQ-QMLSSHNINISKEKYIEIISAKTASLFGATCESAAHLAQVNLQES 199 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 + L+ FG N GI FQ+ DD+LD Sbjct: 200 KALKSFGNNFGIAFQIMDDILD 221 >gi|310766238|gb|ADP11188.1| Octaprenyl diphosphate synthase [Erwinia sp. Ejp617] Length = 324 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 15/189 (7%) Query: 49 GGKKIRSFLVTECASLFN----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK+IR + A N H+T V A IE IH +L+HDD+ +D +RRGK Sbjct: 43 GGKRIRPMIAVLAARAINDYAGKQHIT---VAALIEFIHTATLLHDDV--VDESDMRRGK 97 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ + T AF++++S + ++ ++S N+ +G + Q+ Sbjct: 98 ATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QL 151 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ D I E + KT L A +S AI+A AS+ E++ L+ +G +G FQL Sbjct: 152 MNCNDPDITEESYMRVIYSKTARLFEAAAQSSAILAGASEAEEQALQDYGRYIGTAFQLI 211 Query: 225 DDLLDCEED 233 DDLLD D Sbjct: 212 DDLLDYSAD 220 >gi|259907026|ref|YP_002647382.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96] gi|224962648|emb|CAX54103.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96] gi|283476821|emb|CAY72659.1| octaprenyl diphosphate synthase [Erwinia pyrifoliae DSM 12163] Length = 324 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 15/189 (7%) Query: 49 GGKKIRSFLVTECASLFN----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK+IR + A N H+T V A IE IH +L+HDD+ +D +RRGK Sbjct: 43 GGKRIRPMIAVLAARAINDYAGKQHIT---VAALIEFIHTATLLHDDV--VDESDMRRGK 97 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ + T AF++++S + ++ ++S N+ +G + Q+ Sbjct: 98 ATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QL 151 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ D I E + KT L A +S AI+A AS+ E++ L+ +G +G FQL Sbjct: 152 MNCNDPDITEESYMRVIYSKTARLFEAAAQSSAILAGASEAEEQALQDYGRYIGTAFQLI 211 Query: 225 DDLLDCEED 233 DDLLD D Sbjct: 212 DDLLDYSAD 220 >gi|149378271|ref|ZP_01895982.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893] gi|149357436|gb|EDM45947.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893] Length = 322 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 104/185 (56%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + N L++ A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLSSRALGYNKDEHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ L AFE++ +L+ N++ +LS + +G + Q+++++ Sbjct: 101 ARWGNAPSVLVGDFLYARAFEMM----VELQ-NLKIMDVLSHATAVIAEGEVL-QLMNVK 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + E + + KT L A +GA++A A+ ++++ L +G++LG+ FQL DD+L Sbjct: 155 NPDVSEDKYMEVIHNKTAMLFEAASHTGALLAGANGSQEQALSAYGKHLGLAFQLVDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|300718598|ref|YP_003743401.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661] gi|299064434|emb|CAX61554.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661] Length = 323 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVNYTGKQHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI+A A +++ L+ +G +G FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSAILAEAVPEQEKALQDYGRFIGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|297787795|pdb|3MZV|A Chain A, Crystal Structure Of A Decaprenyl Diphosphate Synthase From Rhodobacter Capsulatus gi|297787796|pdb|3MZV|B Chain B, Crystal Structure Of A Decaprenyl Diphosphate Synthase From Rhodobacter Capsulatus Length = 341 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 9/200 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + A +E IH +L+H Sbjct: 33 MSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYGGPFHVHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L +F++++ N+R +L+ Sbjct: 93 DDV--VDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTD-----TGNMRVMEILA 145 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + +G + Q+ Q+ E + + KT AL A E G I+ A +++ + Sbjct: 146 NASAVIAEGEVL-QLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGIIGGAPEDQVQA 204 Query: 210 LRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 205 LFDYGDALGIAFQIVDDLLD 224 >gi|160893232|ref|ZP_02074020.1| hypothetical protein CLOL250_00778 [Clostridium sp. L2-50] gi|156865315|gb|EDO58746.1| hypothetical protein CLOL250_00778 [Clostridium sp. L2-50] Length = 170 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 6/124 (4%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65 +KL+ ++K + I+ T + + + +A+ Y+ GGK++R L+ E LF Sbjct: 4 NKLELHTKEVQNII-----YTYAPAEEGFQKTIFTAMNYSFQAGGKRLRPLLMQETYRLF 58 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 AAIE IH YSLIHDDLP++DN RRG+ T H+ + E AI+AG+ LL Sbjct: 59 GGTGKVVEPFMAAIEMIHTYSLIHDDLPALDNDEYRRGRKTSHVVFGEAMAILAGDALLN 118 Query: 126 YAFE 129 YAFE Sbjct: 119 YAFE 122 >gi|126653362|ref|ZP_01725466.1| HepT [Bacillus sp. B14905] gi|126589878|gb|EAZ84009.1| HepT [Bacillus sp. B14905] Length = 321 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 14/185 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + V +E IH SL+HDD+ +D+ +RRG+PTV Sbjct: 43 GGKRIRPIFVLLGAKFGEYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Q++ A+ G+ + A E I+ + L I ++ M+ + + G+++ I+ Sbjct: 101 AQWNNRVAMYTGDFIFARALEYITKIEDPLVHQILARTMVEICN---------GEVIQIE 151 Query: 169 DEF-IDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D+F +D+ F K KT L+ +CE GA+ A L+ FG +G+ FQ+ D Sbjct: 152 DKFRLDQGLKDYFRRIKRKTALLISSSCELGAVAAGVDAKTVRHLKRFGYFVGMSFQIID 211 Query: 226 DLLDC 230 D+LD Sbjct: 212 DVLDI 216 >gi|242240764|ref|YP_002988945.1| octaprenyl diphosphate synthase [Dickeya dadantii Ech703] gi|242132821|gb|ACS87123.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech703] Length = 323 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLSS-----LRVLAVMSDAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI+A A + LR +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSAILADADTTCENALRDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|34581601|ref|ZP_00143081.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246] gi|28262986|gb|EAA26490.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246] Length = 327 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 124/227 (54%), Gaps = 20/227 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65 K+Q++ K T L++L++ + ++ L+ + LL GGK+IR L A +F Sbjct: 6 KIQQDLKDEVTKLNNLIISC-----LKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + Sbjct: 61 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 118 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182 +F+++ + + I++ +L+ I +G + Q++ + + IDE Q I K Sbjct: 119 QSFKLMVASGS-----IKAMNVLAKASAIISEGEVV-QLVKLNERRIITIDEYQ--QIVK 170 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L AC GAI+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 171 SKTAELFGTACAVGAIIAGQVDHISKDMQDFGKLLGTIFQVIDDLLD 217 >gi|89897810|ref|YP_514920.1| geranylgeranyl pyrophosphate synthase [Chlamydophila felis Fe/C-56] gi|89331182|dbj|BAE80775.1| geranylgeranyl pyrophosphate synthase [Chlamydophila felis Fe/C-56] Length = 290 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 100/203 (49%), Gaps = 11/203 (5%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + + YAL GGK+IR LV + +N L AIE IH +LI DDLP MD+ Sbjct: 31 APVEYALTSGGKRIRPMLVCMFSKGLGMNR-DVLDSALAIEFIHTSTLIADDLPCMDDDD 89 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH------- 152 RRG+PTVH +DE +A++A L+ A+ I S +LK + + Sbjct: 90 ERRGRPTVHKAFDEASALLASYALIPAAYSRIRSNAKKLKSQGVDPREVDFAYDTISEIT 149 Query: 153 --NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 N G+ G+LGGQ D+ + V I KTGAL AC SG + ++ Sbjct: 150 DKNFGVNGVLGGQYEDMFFKNEGPEYVQSIINKKTGALFEIACASGWLFGGGDPLCVPQI 209 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 F + G++FQ+ DD+LD +D Sbjct: 210 LEFSKTFGLLFQMKDDILDIHQD 232 >gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group] Length = 219 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 4/148 (2%) Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIR 143 SLIHDD+P MD+ +RRG+P+ H+ + E TA++AG+ L AFE ++ + + Sbjct: 2 SLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADRT 61 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAH 201 + + L G G+ GQ+ D + E + + + I KT L+ A SGAI+ Sbjct: 62 LRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTARLLEAAAVSGAIVGG 121 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229 + E ER+R + +G++FQ+ DD+LD Sbjct: 122 GADAEVERVRRYARCVGLLFQVVDDVLD 149 >gi|271499159|ref|YP_003332184.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586] gi|270342714|gb|ACZ75479.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586] Length = 323 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALNYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLAS-----LRVMSVMSDAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI++ AS ++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEDSYMRVIYSKTARLFEAAAQSSAILSDASSEQELALQEYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|146278504|ref|YP_001168663.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145556745|gb|ABP71358.1| Polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 333 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 9/200 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + A +E IH +L+H Sbjct: 33 MASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D + RRGKPT ++ +D ++++ G+ L +F+++ + +I + + Sbjct: 93 DDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVMDILANASAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 ++ LQ + QD E + + KT AL A E G ++A + + Sbjct: 151 ISEGEVLQ------LTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPEAQVAA 204 Query: 210 LRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 205 LHAYGDALGIAFQIVDDLLD 224 >gi|226946118|ref|YP_002801191.1| trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ] gi|226721045|gb|ACO80216.1| Trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ] Length = 322 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + + AAIE +H +L+HDD+ +D+ +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGNALGKCDERMRLLAAAIEFLHTSTLLHDDV--VDDSELRRGRSTSN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L FE++ +L ++M T I +L Q+ ++ Sbjct: 101 ALWGNAPSVLVGDFLYARCFEML----VELASMPVMRIMSQATRVIAEGEVL--QLSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L A A +A A+ + E LRCFG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEAASHGAASLAGATSEQAEALRCFGDSLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|300721522|ref|YP_003710797.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC 19061] gi|297628014|emb|CBJ88563.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC 19061] Length = 323 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + ++V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAGKALQCGDEKHIKVAALIEFIHTATLLHDDV--VDESDMRRGKETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AIYGNAASVLVGDFIYTRSFQMMTD-----LDSMRVLKLMSDATNVIAEGEVM-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A S AI+A+A+ ++ LR +G LG FQL DDLL Sbjct: 155 DPDISEDDYMRVIYSKTARLFEVAAHSAAILANATPEQEIALRDYGCYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDSD 219 >gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis] Length = 304 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 79/133 (59%), Gaps = 4/133 (3%) Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT H Y E AI+AG+ LL+ +FE I+ + + Q+++ + +G +G++ Sbjct: 102 RRGKPTNHKVYGEEIAILAGDALLSLSFEYIARETRGVAADRVLQVIVEVGKAVGSEGLV 161 Query: 161 GGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 GQ +DI+ E E+ + I + KT L+ A SGAI+ A++ + +RLR + + Sbjct: 162 AGQAVDIKSEGAGESVGLDTLQYIHEHKTAVLLEAAVVSGAILGGATEVDVDRLRKYSRS 221 Query: 217 LGIIFQLADDLLD 229 +G+ FQ+ DD+LD Sbjct: 222 IGLAFQVVDDILD 234 >gi|300779369|ref|ZP_07089227.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC 35910] gi|300504879|gb|EFK36019.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC 35910] Length = 323 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 17/188 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V +F + A++ AIE H ++LIHDD+ MD +RR KPT+H Sbjct: 38 GGKRLRPIMVLMACEMFGGDLKEAIKPALAIEFFHNFTLIHDDI--MDEAPLRRNKPTIH 95 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQMLD 166 + I++G+GL+ A++ L+ I + TH G+L GQ D Sbjct: 96 TLHGLNVGILSGDGLMLKAYKFFED----LEPEIFKACIRIFTHT----GLLLCEGQQYD 147 Query: 167 I----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 I Q + + + MI KTG L + E GA++A A + + + FG+++GI FQ Sbjct: 148 INFETQKDVTFDDYIRMIT-YKTGVLSASSFEIGALIAKADFKDAKAIFNFGKHIGIAFQ 206 Query: 223 LADDLLDC 230 + DD LD Sbjct: 207 IMDDYLDV 214 >gi|238783532|ref|ZP_04627554.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970] gi|238715587|gb|EEQ07577.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970] Length = 323 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALHYQGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S +++R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTS-----LESLRVLTLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A++A AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLADASEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|255264686|ref|ZP_05344028.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62] gi|255107021|gb|EET49695.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62] Length = 332 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 9/203 (4%) Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86 A+ M ++H R+ + + GGK++R L A L + +++ A +E IH + Sbjct: 30 AARMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAAQLCGYDGDNHIKLAATVEFIHTAT 89 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+HDD+ +D RRG+PT ++ +D ++++ G+ L +F+++ + +I + Sbjct: 90 LLHDDV--VDESAQRRGRPTANLLWDNQSSVLVGDYLFARSFQLMVKTGSLRVLDILANA 147 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 ++ LQ M QD E I + KT AL A + G +++ A + Sbjct: 148 AATIAEGEVLQ------MTAAQDLGTTEDTYLKIVRGKTAALFSAATQVGGVISDADETI 201 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 + L +G+ LGI FQ+ DDLLD Sbjct: 202 VKALYDYGDALGIAFQIVDDLLD 224 >gi|159045612|ref|YP_001534406.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12] gi|157913372|gb|ABV94805.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12] Length = 334 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 9/207 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + A +E IH +L+H Sbjct: 34 MASEHAPRIPEVTAHLVEAGGKRLRPMLTLATARLCGYTGPYHVHLAATVEFIHTATLLH 93 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L +F+++ + +I + + Sbjct: 94 DDV--VDESNQRRGRPTANLLWDNQSSVLVGDYLFARSFQLMVETGSLRVLDILANAAAT 151 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + QD DE + + KT AL A E G ++A A + + Sbjct: 152 IAEGEVLQ------LSAAQDLATDEDIYLKVVRGKTAALFSAATEVGGVIAGADEAQVRA 205 Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236 L +G+ LGI FQ+ DDLLD D K Sbjct: 206 LFTYGDALGIAFQIVDDLLDYGGDSTK 232 >gi|292486819|ref|YP_003529689.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430] gi|292900783|ref|YP_003540152.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946] gi|291200631|emb|CBJ47763.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946] gi|291552236|emb|CBA19273.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430] gi|312170887|emb|CBX79146.1| octaprenyl diphosphate synthase [Erwinia amylovora ATCC BAA-2158] Length = 324 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 15/189 (7%) Query: 49 GGKKIRSFLVTECASLFN----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK+IR + A N H+T V A IE IH +L+HDD+ +D +RRGK Sbjct: 43 GGKRIRPMIAVLAARAINDYAGKQHIT---VAALIEFIHTATLLHDDV--VDESDMRRGK 97 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ + T AF++++S + ++ ++S N+ +G + Q+ Sbjct: 98 ATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QL 151 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ D I E + KT L A +S AI+A AS E++ L+ +G +G FQL Sbjct: 152 MNCNDPDITEESYMRVIYSKTARLFEAAAQSSAILAGASATEEQALQDYGRYIGTAFQLI 211 Query: 225 DDLLDCEED 233 DDLLD D Sbjct: 212 DDLLDYSAD 220 >gi|87199374|ref|YP_496631.1| farnesyltranstransferase [Novosphingobium aromaticivorans DSM 12444] gi|87135055|gb|ABD25797.1| Farnesyltranstransferase [Novosphingobium aromaticivorans DSM 12444] Length = 337 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 22/192 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L ++ AA+E IH +L+HDD+ +D +RRGK T + Sbjct: 56 GGKRMRPMLTLASAALLGYGGSRHYKLAAAVEFIHTATLLHDDV--VDGSDMRRGKKTAN 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I Y ++ G+ L + +FE++ +++ +LS + +G + Sbjct: 114 IVYGNPATVLVGDFLFSRSFELMVE-----DGSLKVLRILSNASAVISEGEV-------- 160 Query: 169 DEFIDETQVFMIQKM-------KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D+ + + Q+ ++M KT AL AC A++A ++ L +G NLGI F Sbjct: 161 DQLVAQRQIDTTEEMYLDIIAAKTAALFSAACRIAAVVAERPDADELALDAYGRNLGIAF 220 Query: 222 QLADDLLDCEED 233 QLADD +D + D Sbjct: 221 QLADDAIDYDSD 232 >gi|157828600|ref|YP_001494842.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933313|ref|YP_001650102.1| decaprenyl diphosphate synthase [Rickettsia rickettsii str. Iowa] gi|157801081|gb|ABV76334.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908400|gb|ABY72696.1| farnesyl pyrophosphate synthetase [Rickettsia rickettsii str. Iowa] Length = 355 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 123/227 (54%), Gaps = 20/227 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65 K+Q++ K T L++L++ + ++ L+ + LL GGK+IR L A +F Sbjct: 34 KIQQDLKDEVTKLNNLIISCL-----KSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 88 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + Sbjct: 89 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 146 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182 +F+++ + + I++ +L+ I +G + Q++ + + IDE Q I K Sbjct: 147 QSFKLMVASGS-----IKAMHVLAKASAIISEGEVV-QLVKLNERRIITIDEYQ--QIVK 198 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L AC G I+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 199 SKTAELFGTACAVGTIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLD 245 >gi|215405436|ref|ZP_03417617.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis 02_1987] gi|289747226|ref|ZP_06506604.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289687754|gb|EFD55242.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length = 359 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 21/187 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV A + +A+ ++E +H +SL+HDDL MD RR +PTV Sbjct: 72 GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWA 129 Query: 110 QYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + + A++AG+ +L+ A E++ SP S+ L + GQ D Sbjct: 130 LWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATREL---------IRGQAAD 180 Query: 167 IQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 F T V + + + KT ALM + E GA++A A ++ +E L +G ++G+ F Sbjct: 181 TA--FESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAF 238 Query: 222 QLADDLL 228 QL DDLL Sbjct: 239 QLVDDLL 245 >gi|46203612|ref|ZP_00051268.2| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum magnetotacticum MS-1] Length = 312 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 9/182 (4%) Query: 49 GGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L CA L + A+++ AA+E +H +L+HDD+ +D +RRG+ Sbjct: 30 GGKRLRPILTLACADLCGYGDGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 87 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 I++ +++ G+ LL AF ++ + +R+ +LS + +G + Q+ Sbjct: 88 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 141 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 ++ E + + + KT L ACE G ++A + E+ R +G NLGI FQL DD+ Sbjct: 142 KNTETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPEAEQVACRAYGMNLGIAFQLIDDV 201 Query: 228 LD 229 LD Sbjct: 202 LD 203 >gi|15842992|ref|NP_338029.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31794579|ref|NP_857072.1| multifunctional dimethylallyltransferase/farnesyl diphosphate synthetase/ farnesyltranstransferase [Mycobacterium bovis AF2122/97] gi|57117104|ref|YP_177970.1| multifunctional dimethylallyltransferase/farnesyl diphosphate synthetase/ farnesyltranstransferase [Mycobacterium tuberculosis H37Rv] gi|121639323|ref|YP_979547.1| putative multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663262|ref|YP_001284785.1| putative multifunctional geranylgeranyl pyrophosphate synthetase IdsA1 [Mycobacterium tuberculosis H37Ra] gi|148824606|ref|YP_001289360.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis F11] gi|167968716|ref|ZP_02550993.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis H37Ra] gi|215413305|ref|ZP_03421990.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis 94_M4241A] gi|215428901|ref|ZP_03426820.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis T92] gi|215447727|ref|ZP_03434479.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis T85] gi|218755177|ref|ZP_03533973.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis GM 1503] gi|219559472|ref|ZP_03538548.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis T17] gi|224991820|ref|YP_002646509.1| putative multifunctional geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800445|ref|YP_003033446.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN 1435] gi|254234000|ref|ZP_04927325.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 : dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis C] gi|254366010|ref|ZP_04982055.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 : dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis str. Haarlem] gi|254552504|ref|ZP_05142951.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188455|ref|ZP_05765929.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis CPHL_A] gi|260202524|ref|ZP_05770015.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T46] gi|260206765|ref|ZP_05774256.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis K85] gi|289444945|ref|ZP_06434689.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T46] gi|289449096|ref|ZP_06438840.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis CPHL_A] gi|289555674|ref|ZP_06444884.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN 605] gi|289571635|ref|ZP_06451862.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T17] gi|289576131|ref|ZP_06456358.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis K85] gi|289752116|ref|ZP_06511494.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T92] gi|289759559|ref|ZP_06518937.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289763581|ref|ZP_06522959.1| dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis GM 1503] gi|294995828|ref|ZP_06801519.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis 210] gi|297636060|ref|ZP_06953840.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN 4207] gi|297733060|ref|ZP_06962178.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN R506] gi|298526881|ref|ZP_07014290.1| dimethylallyltransferase/geranyltranstransferase/farnesyltranstrans ferase [Mycobacterium tuberculosis 94_M4241A] gi|306777739|ref|ZP_07416076.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu001] gi|306782466|ref|ZP_07420803.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu002] gi|306786286|ref|ZP_07424608.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu003] gi|306790656|ref|ZP_07428978.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu004] gi|306795183|ref|ZP_07433485.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu005] gi|306799374|ref|ZP_07437676.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu006] gi|306805221|ref|ZP_07441889.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu008] gi|306809406|ref|ZP_07446074.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu007] gi|306969512|ref|ZP_07482173.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu009] gi|306973857|ref|ZP_07486518.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu010] gi|307081569|ref|ZP_07490739.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu011] gi|307086177|ref|ZP_07495290.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu012] gi|313660391|ref|ZP_07817271.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN V2475] gi|61224677|sp|P0A5H8|GGPPS_MYCTU RecName: Full=Probable geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|61224678|sp|P0A5H9|GGPPS_MYCBO RecName: Full=Probable geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|13883332|gb|AAK47843.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31620176|emb|CAD95619.1| PROBABLE MULTIFUNCTIONAL GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA1 (GGPP SYNTHETASE) (GGPPSASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE): DIMETHYLALLYLTRANSFERASE (PRENYLTRANSFERASE) (GERANYL-DIPHOSPHATE SYNTHASE) + GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE) (FARNESYL-PYROPHOSPHATE SYNTHETASE) (FARNESYL DIPHOSPHATE SYNTHETASE) (FPP SYNTHETASE) + FARNESYLTRANSTRANSFERASE (GERANYLGERANYL-DIPHOSPHATE SYNTHASE) [Mycobacterium bovis AF2122/97] gi|38490369|emb|CAE55595.1| PROBABLE MULTIFUNCTIONAL GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA1 (GGPP SYNTHETASE) (GGPPSASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE): DIMETHYLALLYLTRANSFERASE (PRENYLTRANSFERASE) (GERANYL-DIPHOSPHATE SYNTHASE) + GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE) (FARNESYL-PYROPHOSPHATE SYNTHETASE) (FARNESYL DIPHOSPHATE SYNTHETASE) (FPP SYNTHETASE) + FARNESYLTRANSTRANSFERASE (GERANYLGERANYL-DIPHOSPHATE SYNTHASE) [Mycobacterium tuberculosis H37Rv] gi|121494971|emb|CAL73457.1| Probable multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599529|gb|EAY58633.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 : dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis C] gi|134151523|gb|EBA43568.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 : dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis str. Haarlem] gi|148507414|gb|ABQ75223.1| putative multifunctional geranylgeranyl pyrophosphate synthetase IdsA1 [Mycobacterium tuberculosis H37Ra] gi|148723133|gb|ABR07758.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis F11] gi|224774935|dbj|BAH27741.1| putative multifunctional geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321948|gb|ACT26551.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN 1435] gi|289417864|gb|EFD15104.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T46] gi|289422054|gb|EFD19255.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis CPHL_A] gi|289440306|gb|EFD22799.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN 605] gi|289540562|gb|EFD45140.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis K85] gi|289545389|gb|EFD49037.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T17] gi|289692703|gb|EFD60132.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis T92] gi|289711087|gb|EFD75103.1| dimethylallyltransferase + geranyltranstransferase + farnesyltranstransferase [Mycobacterium tuberculosis GM 1503] gi|289715123|gb|EFD79135.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|298496675|gb|EFI31969.1| dimethylallyltransferase/geranyltranstransferase/farnesyltranstrans ferase [Mycobacterium tuberculosis 94_M4241A] gi|308213915|gb|EFO73314.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu001] gi|308324859|gb|EFP13710.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu002] gi|308329115|gb|EFP17966.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu003] gi|308332952|gb|EFP21803.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu004] gi|308336511|gb|EFP25362.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu005] gi|308340388|gb|EFP29239.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu006] gi|308344247|gb|EFP33098.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu007] gi|308348237|gb|EFP37088.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu008] gi|308352963|gb|EFP41814.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu009] gi|308356785|gb|EFP45636.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu010] gi|308360733|gb|EFP49584.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu011] gi|308364344|gb|EFP53195.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis SUMu012] gi|323717885|gb|EGB27074.1| multifunctional geranylgeranyl pyrophosphate synthetase id [Mycobacterium tuberculosis CDC1551A] gi|326905242|gb|EGE52175.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis W-148] gi|328460177|gb|AEB05600.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 [Mycobacterium tuberculosis KZN 4207] Length = 359 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 21/187 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV A + +A+ ++E +H +SL+HDDL MD RR +PTV Sbjct: 72 GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWA 129 Query: 110 QYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + + A++AG+ +L+ A E++ SP S+ L + GQ D Sbjct: 130 LWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATREL---------IRGQAAD 180 Query: 167 IQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 F T V + + + KT ALM + E GA++A A ++ +E L +G ++G+ F Sbjct: 181 TA--FESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAF 238 Query: 222 QLADDLL 228 QL DDLL Sbjct: 239 QLVDDLL 245 >gi|332886110|gb|EGK06354.1| hypothetical protein HMPREF9456_00228 [Dysgonomonas mossii DSM 22836] Length = 323 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 96/186 (51%), Gaps = 20/186 (10%) Query: 50 GKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GK+IR L+ C + N+ + A+ V E +H SLIHDD+ +D IRRGK Sbjct: 45 GKRIRPILLLLAAKACGEINNITYNAAITV----ELLHTASLIHDDV--VDESKIRRGKA 98 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQ 163 +++ YD A++AG+ L+ A K+ L NI ++S ++G G Q Sbjct: 99 SLNAIYDNKMAVLAGDYFLSTAL-----IKSVLTGNIE---IISNISDLGRDLAEGELNQ 150 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + +++ IDE + F + K KT +LM GAI +AS+ E E+ GE G+ FQL Sbjct: 151 LSLVKELIIDEDEYFQVIKKKTASLMSVCMRIGAISVNASEEEIEKFTRLGELFGLCFQL 210 Query: 224 ADDLLD 229 DD+ D Sbjct: 211 RDDIFD 216 >gi|291557469|emb|CBL34586.1| farnesyl-diphosphate synthase [Eubacterium siraeum V10Sc8a] Length = 302 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 15/233 (6%) Query: 2 NGGLPSKLQEN----SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSF 56 +GG + +E K++ T+ D A + L A Y+L GGK+IR Sbjct: 12 DGGFDAVFREYRAIFEKQLRTVCDSFCDNGAKYRA------LYDAASYSLEAGGKRIRPV 65 Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 L E + + A+ A+E IH +SLIHDDLP MD+ +RRG+P+ H + E A Sbjct: 66 LAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDDDDMRRGRPSCHKAHGEAVA 125 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176 ++AG+ L YA + I + L ++ ++ L GM+ GQ +D +F Sbjct: 126 LLAGDALSAYAGKYICD--SDLPAEKKTAMIKELYDRT--LGMIEGQTIDTDGKFDTLDG 181 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + +MKT L+ A G I A A + + R + ++G+ FQ+ DD+LD Sbjct: 182 LLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILD 234 >gi|302390068|ref|YP_003825889.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646] gi|302200696|gb|ADL08266.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646] Length = 326 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV F+ + + A E IH SLIHDD+ +D RR +PT++ Sbjct: 47 GGKRLRPKLVLLSGLCFSPVNTKMIYSAVAAELIHTASLIHDDV--IDRSDYRRNRPTIN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQMLDI 167 Y TA++AG+ + AFE++ R L + + + +Q M G+++ Sbjct: 105 YVYGNHTAVLAGDYIFAKAFEVLC----------RQNLNRCMGYLVEAIQEMCTGEIIQA 154 Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D +DE + F + KT +L+ C+SGA A + + E++ FG LG FQ+ Sbjct: 155 RESPDLTVDEDRYFRTIEKKTASLIAACCKSGADCGKADEVQIEKMGLFGLYLGYAFQIV 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDILDITGD 223 >gi|215432365|ref|ZP_03430284.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1: dimethylallyltransferase + geranyltranstransferase + [Mycobacterium tuberculosis EAS054] gi|289755528|ref|ZP_06514906.1| dimethylallyltransferase + geranyltranstransferase [Mycobacterium tuberculosis EAS054] gi|289696115|gb|EFD63544.1| dimethylallyltransferase + geranyltranstransferase [Mycobacterium tuberculosis EAS054] Length = 359 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 21/187 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV A + +A+ ++E +H +SL+HDDL MD RR +PTV Sbjct: 72 GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWA 129 Query: 110 QYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + + A++AG+ +L+ A E++ SP S+ L + GQ D Sbjct: 130 LWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATREL---------IRGQAAD 180 Query: 167 IQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 F T V + + + KT ALM + E GA++A A ++ +E L +G ++G+ F Sbjct: 181 TA--FESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAF 238 Query: 222 QLADDLL 228 QL DDLL Sbjct: 239 QLVDDLL 245 >gi|300174004|ref|YP_003773170.1| geranyl pyrophosphate synthase [Leuconostoc gasicomitatum LMG 18811] gi|299888383|emb|CBL92351.1| Geranyl pyrophosphate synthase [Leuconostoc gasicomitatum LMG 18811] Length = 332 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 16/200 (8%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSM 95 D + AIR L GK +R L + L + N+ +A+ +GA++E +H +LIHDD+ + Sbjct: 36 DEIDRAIRSQLNAGKLVRPALTLIFSQLSDQNYNKSAISLGASVELLHLATLIHDDV--I 93 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D +RRG ++ Q+ + TA+ AG+ LLT F ++ S + + L+LT Sbjct: 94 DESKLRRGHESIQSQFGKDTAVYAGDYLLTGMFSLLDSADKPVANK------LALT---A 144 Query: 156 LQGMLGGQMLDIQDEF-IDET--QVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLR 211 LQ +L G+++ Q+ + +D T F K KT AL + G + + E + + Sbjct: 145 LQEILFGELVQKQNRYNLDTTFPTYFSQIKGKTAALFKLSATFGLVSSKTYNTELLDTVS 204 Query: 212 CFGENLGIIFQLADDLLDCE 231 GEN+GI FQL DD LD E Sbjct: 205 KLGENIGITFQLLDDYLDFE 224 >gi|88706667|ref|ZP_01104370.1| geranylgeranyl pyrophosphate synthetase [Congregibacter litoralis KT71] gi|88699163|gb|EAQ96279.1| geranylgeranyl pyrophosphate synthetase [Congregibacter litoralis KT71] Length = 290 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 17/197 (8%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNH----LTALRVGAAIECIHCYSLIHDDLP 93 L +A+ +++ GG ++R L C ++ NH A A++E +HC SL+HDD+P Sbjct: 28 LAAALHHSVFPGGARVRPKL---CLAVALANHCDAPALAAAAAASVELLHCASLVHDDMP 84 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 DN RRG+ +VH Y E A++AG+ L+ AF +++ P+ K+ + SQLM + Sbjct: 85 CFDNADERRGRQSVHTAYGEPIALLAGDALIVSAFALLARPQLPAKNRL-SQLMRVVAEG 143 Query: 154 IGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 +G G+ GQ + + +D V + + KTGAL + A A A+ + + Sbjct: 144 VGAPCGIAAGQAWE-SEPVVD---VSLYHRAKTGALF---IAATAAGAAAAGVDVAPWKL 196 Query: 213 FGENLGIIFQLADDLLD 229 G +G +Q+ADD+ D Sbjct: 197 LGAKIGEAYQVADDIQD 213 >gi|225874396|ref|YP_002755855.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC 51196] gi|225794389|gb|ACO34479.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC 51196] Length = 329 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 22/222 (9%) Query: 16 IDTILDDLL-----LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70 D + DDLL +TA+ + Q + +R GGK+IR L+ A + Sbjct: 13 FDLLHDDLLEIEREFETAAVSRVQVITEIAEYLREG--GGKRIRPLLLLLSARSQSYRGA 70 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A R+GA +E +H +L+HDD+ +D +RRG+P+ + + ++AG+ L AF + Sbjct: 71 GATRLGAVVEMVHTATLVHDDI--IDAADMRRGRPSPNTTWGNAKCVLAGDWLYMQAFRV 128 Query: 131 ISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGA 187 + N R L++ LT Q M+ G+++ ++ ++ + + + KT Sbjct: 129 ALDER-----NFRVLDLLIGLT-----QQMVEGELMQLETLGRQVNSQEYYDLIYRKTAC 178 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L + GA++A A+ E+E + +G NLG+ FQ+ DD+LD Sbjct: 179 LFEVSMRLGAVLAKATDAEEECMGEYGRNLGLAFQIVDDVLD 220 >gi|153207271|ref|ZP_01946035.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212218206|ref|YP_002304993.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154] gi|120576759|gb|EAX33383.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012468|gb|ACJ19848.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154] Length = 332 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 15/189 (7%) Query: 49 GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R +V C +V H + IE IH +L+HDD+ +D RRG+ Sbjct: 52 GGKRLRPLVVLLTARACGYEQDVEHQ---ELATVIEFIHTATLLHDDV--VDKSTQRRGQ 106 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ L + AF+I++ + N+ +L+ T N +G + Q+ Sbjct: 107 KTANALWGNSASVLVGDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QL 160 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ D IDE + + + KT L A E GAI+A ++ ++ + FG +LG+ +Q+ Sbjct: 161 MNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQII 220 Query: 225 DDLLDCEED 233 DDLLD +D Sbjct: 221 DDLLDYSKD 229 >gi|271968156|ref|YP_003342352.1| geranylgeranyl pyrophosphate synthase-like protein [Streptosporangium roseum DSM 43021] gi|270511331|gb|ACZ89609.1| Geranylgeranyl pyrophosphate synthase-like protein [Streptosporangium roseum DSM 43021] Length = 346 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 92/191 (48%), Gaps = 17/191 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK IR LV A + AL A+E H +SL+HDD+ MD RR +PT Sbjct: 61 GGKAIRPALVLLAAEVVGGGAAAALPAAVAVELAHNFSLLHDDV--MDGDRTRRHRPTAW 118 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + AI+AG+ LLT AF+++++ P T I S +Q +L GQ Sbjct: 119 TVFGVSPAILAGDALLTLAFDVLAAGGHPATPRAARIFSA---------AIQELLEGQHT 169 Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D+ E ++ + + KTGAL+ AC GA+ S + E L FG +LG+ FQ Sbjct: 170 DVAFERRQDVELAECLSMAAGKTGALLGCACALGALFGGGSLAQVEHLHAFGRDLGLAFQ 229 Query: 223 LADDLLDCEED 233 DDLL D Sbjct: 230 FVDDLLGIWGD 240 >gi|77919579|ref|YP_357394.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380] gi|77545662|gb|ABA89224.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380] Length = 322 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L+ CA L N + + IE IH +L+HDD+ +D +RRG+ + Sbjct: 41 GGKRIRPVLLLLCARLSGYNGEHRYPLASVIEFIHTATLLHDDV--VDGATLRRGQVAAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + A++ G+ L FE++ D R +L+ T ++ QG + Q+++ Sbjct: 99 VTWGNDIAVLVGDYLFARCFEMM----VDFCDR-RIMQVLANTTSLMAQGEVV-QLINSG 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT AL C AI+ S ++E L FG +LG+ FQL DD L Sbjct: 153 DLSLDEERYLSVVRSKTAALFSATCRCAAILGQLSAEKEEDLAGFGMHLGVAFQLVDDAL 212 Query: 229 DCEED 233 D D Sbjct: 213 DYVAD 217 >gi|254483435|ref|ZP_05096664.1| polyprenyl synthetase superfamily protein [marine gamma proteobacterium HTCC2148] gi|214036309|gb|EEB76987.1| polyprenyl synthetase superfamily protein [marine gamma proteobacterium HTCC2148] Length = 320 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A+ F ++ A IE IH +L+HDD+ +D +RRG+PT + Sbjct: 41 GGKRLRPLLVLLTAAAFGRCGPDQIKFAAVIEFIHTATLLHDDV--VDISSLRRGRPTAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ L T AF+++ QL D M + T+ I +L Q++ Sbjct: 99 AEFGNAPSVLVGDFLYTRAFQLM----VQLGDMDILTHMANTTNTIAEGEVL--QLVRAG 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E Q + KT L C A + H + + + FG NLGI FQ+ DD+L Sbjct: 153 NADTTEQQYLDVITRKTAILFAAGCYGAATLCHQESSVCQGMHSFGLNLGIAFQMIDDIL 212 Query: 229 DCEED 233 D E D Sbjct: 213 DYEGD 217 >gi|322436201|ref|YP_004218413.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9] gi|321163928|gb|ADW69633.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9] Length = 329 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 20/221 (9%) Query: 16 IDTILDDLL-LQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA 72 +D + DDLL ++ +Q+ ++++ I L+ GGK+IR L+ A + Sbjct: 13 MDLLRDDLLAIEREFTVQSASPVQVITDIAEYLIAGGGKRIRPLLLLLSAKALGATSQSR 72 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +R+GA +E +H +L+HDD+ +D RRG+P+ + + ++AG+ L +F Sbjct: 73 IRLGAVVEMLHTATLVHDDI--IDEADTRRGRPSSNTAWGNSKCVLAGDWLYMQSF---- 126 Query: 133 SPKTQLKD-NIRS-QLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGAL 188 +T L++ N L+++LT Q M+ G++L ++ I+E + F + KT L Sbjct: 127 --RTALEERNFHVLDLLITLT-----QQMVEGELLQMEKLGHLINEEEYFDLIFRKTAFL 179 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + GA + AS +E+L +G NLG+ FQ+ DD+LD Sbjct: 180 FKVSMQLGAAIEGASDQTEEKLGEYGRNLGLAFQIVDDVLD 220 >gi|311897904|dbj|BAJ30312.1| putative polyprenyl diphosphate synthase [Kitasatospora setae KM-6054] Length = 337 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG P+ + Sbjct: 53 GGKRFRPLLVMLAAQFGDPTAPGVVPSAVVVELTHLATLYHDDV--MDEAPVRRGAPSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D AI+ G+ L + A +++S T+ +R Q + + ++ GQ+L+ Sbjct: 111 SRWDNSVAILTGDFLFSRASQVLSDLGTE---AVRIQ-------SDAFERLVTGQILETA 160 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ + + KTG+L+ AC G++MA A + + L +GE +G FQLAD Sbjct: 161 GPRPEDDPLRHYLDVISGKTGSLIAVACRFGSLMAGAERWIVDLLTQYGERIGTAFQLAD 220 Query: 226 DLLDCEED 233 D+LD D Sbjct: 221 DVLDIASD 228 >gi|167043297|gb|ABZ08002.1| putative polyprenyl synthetase [uncultured marine crenarchaeote HF4000_ANIW141M18] Length = 283 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 23/224 (10%) Query: 14 KRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNH 69 K+I+ +LD +L L T S + ++YAL GGK+IR L +EC + N Sbjct: 20 KKINNVLDSELELYTESEFK--------EPLKYALDGGKRIRPIILLLSSECVGEIDDNT 71 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 L A AIE +H S+IHDD+ +DN +RR K HI+Y +++ G+ +L Sbjct: 72 LAA---ACAIEFLHTESVIHDDI--IDNETLRRQKDPFHIKYGYNISVLTGDFVLGLILN 126 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 I S +N R L+ T + +G + L+ ++ + + +I+ KT Sbjct: 127 IASRI-----NNPRVTKNLATTAMMMSEGEVIESRLEASEDVTFDDYLKVIE-YKTATAF 180 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A GAI++ ++ E E L +G+N+GI +Q+ DDLLD + + Sbjct: 181 ETASRLGAIISEGTEEEIESLADYGKNIGIAYQIRDDLLDWQNE 224 >gi|291531063|emb|CBK96648.1| farnesyl-diphosphate synthase [Eubacterium siraeum 70/3] Length = 302 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 5/192 (2%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A Y+L GGK+IR L E + + A+ A+E IH +SLIHDDLP MD+ Sbjct: 47 LYDAASYSLEAGGKRIRPVLAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDD 106 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+P+ H + E A++AG+ L YA + I + + M+ ++ L Sbjct: 107 DDMRRGRPSCHKAHGEAVALLAGDALSAYAGKYICDSNLSAE---KKTAMIKELYDRTL- 162 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GM+ GQ +D +F + + +MKT L+ A G I A A + + R + ++ Sbjct: 163 GMIEGQTIDTDGKFDTLDGLLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDV 222 Query: 218 GIIFQLADDLLD 229 G+ FQ+ DD+LD Sbjct: 223 GLAFQIVDDILD 234 >gi|229543999|ref|ZP_04433058.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans 36D1] gi|229325138|gb|EEN90814.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans 36D1] Length = 320 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 119/228 (52%), Gaps = 21/228 (9%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L S L+ + + I+ L + + A+ +Q Q ++ LL A GGK+IR V A Sbjct: 6 LYSFLKTDIELIEQELANAVASNAALIQ-QASESLLKA------GGKRIRPVFVLLGAKF 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + V A+E IH SL+HDD+ +D+ +RRGKPTV ++D A+ G+ +L Sbjct: 59 GDYEIERVKNVAVALELIHMASLVHDDV--IDDAELRRGKPTVKAKWDNRIAMYTGDYIL 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ- 181 A E I T+++D Q++ + + G++ I+D+ F + ++ + Sbjct: 117 ATALEYI----TKVEDLSAHQILADTLVEVCV-----GEIEQIKDKYRFHQNLRCYLRRI 167 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K KT L+ +C+ GAI + A +N +L FG N+G+ +Q+ DD+LD Sbjct: 168 KRKTALLIAASCQLGAIASGADENIHRQLYRFGYNVGMSYQIIDDILD 215 >gi|165918704|ref|ZP_02218790.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334] gi|165917639|gb|EDR36243.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334] Length = 332 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 15/189 (7%) Query: 49 GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R +V C +V H + IE IH +L+HDD+ +D RRG+ Sbjct: 52 GGKRLRPLVVLLTARACGYEQDVEHQ---ELATVIEFIHTATLLHDDV--VDKSTQRRGQ 106 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ L + AF+I++ + N+ +L+ T N +G + Q+ Sbjct: 107 KTANALWGNSASVLVGDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QL 160 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ D IDE + + + KT L A E GAI+A ++ ++ + FG +LG+ +Q+ Sbjct: 161 MNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQII 220 Query: 225 DDLLDCEED 233 DDLLD +D Sbjct: 221 DDLLDYSKD 229 >gi|29653729|ref|NP_819421.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493] gi|161831382|ref|YP_001596323.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331] gi|29540992|gb|AAO89935.1| farnesyl pyrophosphate synthetase [Coxiella burnetii RSA 493] gi|161763249|gb|ABX78891.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331] Length = 332 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 15/189 (7%) Query: 49 GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R +V C +V H + IE IH +L+HDD+ +D RRG+ Sbjct: 52 GGKRLRPLVVLLTARACGYEQDVEHQ---ELATVIEFIHTATLLHDDV--VDKSTQRRGQ 106 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ L + AF+I++ + N+ +L+ T N +G + Q+ Sbjct: 107 KTANALWGNSASVLVGDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QL 160 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ D IDE + + + KT L A E GAI+A ++ ++ + FG +LG+ +Q+ Sbjct: 161 MNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGFHLGMAYQII 220 Query: 225 DDLLDCEED 233 DDLLD +D Sbjct: 221 DDLLDYSKD 229 >gi|329765834|ref|ZP_08257400.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137677|gb|EGG41947.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 283 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 10/196 (5%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 + +RY+L GGK+IR +++ A L A+E +H S+IHDD+ +DN Sbjct: 38 FIEPLRYSLEGGKRIRPIILSLAAESVGKIDDNTLAASCAVEFLHMESIIHDDI--IDNE 95 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RR + HI+Y T+++ G+ +L I S DN R L+ T + +G Sbjct: 96 TMRRQREPFHIKYGYNTSVLTGDFVLGLILAISSRL-----DNARITKDLATTAMLMSEG 150 Query: 159 -MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 M+ ++ +D D+ + + KT A GAI+A S+ E E L +G+N+ Sbjct: 151 EMIESRLESSEDVTFDD--YLKVIEYKTATAFEVAARIGAIIASGSEEEIEALTEYGKNI 208 Query: 218 GIIFQLADDLLDCEED 233 GI +Q+ DDLLD + + Sbjct: 209 GIAYQIRDDLLDWKNE 224 >gi|219669361|ref|YP_002459796.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] gi|219539621|gb|ACL21360.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] Length = 331 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + A F + AL A E IH SLIHDD+ +D+ RRG PT++ Sbjct: 52 GGKRLRPLLTLQSAQCFGPLNSAALDAAVAAELIHMASLIHDDV--IDHSDRRRGIPTIN 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQMLDI 167 Q A++AG+ + AF I+++ L+ S+++ + +Q M G++ Sbjct: 110 SQRGNQVAVLAGDYVFAEAFRILAN----------KHLLTSMSYLVDAIQSMCDGEVQQA 159 Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D ++ +Q F KTG L+ C SGA A A+Q E L +G NLG +Q+ Sbjct: 160 EQRCDLAVEPSQYFQRIAQKTGILLASCCCSGAASAGANQKAVEALGQYGMNLGYAYQII 219 Query: 225 DDLLD 229 DD+LD Sbjct: 220 DDILD 224 >gi|294634497|ref|ZP_06713032.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685] gi|291092011|gb|EFE24572.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685] Length = 323 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALHYQGDRHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLQS-----LRILELMSAATNVIAEGEVM-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+A A +++ L+ +G LG FQL DDLL Sbjct: 155 DPDISEENYMQVIYSKTARLFEAAAQCSAILAGADTHQELALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|254516949|ref|ZP_05129007.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3] gi|219674454|gb|EED30822.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3] Length = 320 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV ++ + A +E IH +L+HDD+ +D +RRG+PT + Sbjct: 41 GGKRLRPVLVLLSSAALGPISDAQIHFAAVVEFIHTATLLHDDV--VDVSELRRGRPTAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AF+++ + L ++ ++M T+ I +L Q++ Sbjct: 99 SAFGNAPSVLVGDFLYTRAFQLMVA----LGNHDVLKMMADTTNTIAAGEVL--QLIRAG 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E Q + + KT AL CE A++A A E+LR G ++GI FQL DDLL Sbjct: 153 DAATSEEQYYDVIDRKTAALFAAGCEGAALLAGADAARVEQLRVCGRSIGIAFQLIDDLL 212 Query: 229 DCEED 233 D E D Sbjct: 213 DYEGD 217 >gi|154706037|ref|YP_001425022.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway 5J108-111] gi|154355323|gb|ABS76785.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway 5J108-111] Length = 332 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 15/189 (7%) Query: 49 GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R +V C +V H + IE IH +L+HDD+ +D RRG+ Sbjct: 52 GGKRLRPLVVLLTARACGYEQDVEHQ---ELATVIEFIHTATLLHDDV--VDKSTQRRGQ 106 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ L + AF+I++ + N+ +L+ T N +G + Q+ Sbjct: 107 KTANALWGNSASVLVGDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QL 160 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ D IDE + + + KT L A E GAI+A ++ ++ + FG +LG+ +Q+ Sbjct: 161 MNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQII 220 Query: 225 DDLLDCEED 233 DDLLD +D Sbjct: 221 DDLLDYSKD 229 >gi|212213122|ref|YP_002304058.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212] gi|212011532|gb|ACJ18913.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212] Length = 332 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 15/189 (7%) Query: 49 GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R +V C +V H + IE IH +L+HDD+ +D RRG+ Sbjct: 52 GGKRLRPLVVLLTARACGYEQDVEHQ---ELATVIEFIHTATLLHDDV--VDKSTQRRGQ 106 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ L + AF+I++ + N+ +L+ T N +G + Q+ Sbjct: 107 KTANALWGNSASVLVGDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QL 160 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ D IDE + + + KT L A E GAI+A ++ ++ + FG +LG+ +Q+ Sbjct: 161 MNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQII 220 Query: 225 DDLLDCEED 233 DDLLD +D Sbjct: 221 DDLLDYSKD 229 >gi|91201536|emb|CAJ74596.1| similar to geranylgeranyl pyrophosphate (GGPP) synthetase [Candidatus Kuenenia stuttgartiensis] Length = 327 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 108/231 (46%), Gaps = 19/231 (8%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 G+ ++ +ID +L +L+ + L I Y + GK++R + Sbjct: 2 GIEDSIRTYGAKIDDMLRELI-------PVDEENYLSEPIWYHMNTKGKRVRPAICLITC 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 N AL AIE +H L+HDD+ D +RR +PTV ++Y AI AG+ Sbjct: 55 EALGGNPENALSFALAIEVLHNMFLMHDDIEDGDT--VRRDQPTVWVKYGTANAINAGDY 112 Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 LL A++ ++SP K R +L+ +LT G + GQ LDI + V Sbjct: 113 LLACAYKSTLASPVAPEK---RLKLLEALTLTYG--KTVEGQALDINARAAESFTVAAYM 167 Query: 182 KM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KM KTG + GAI+A AS E++ G+N+G FQ+ DDL+D Sbjct: 168 KMVELKTGYYLACGMVGGAIVAGASNEVVEKIWMLGKNMGPAFQIRDDLID 218 >gi|238797569|ref|ZP_04641066.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969] gi|238718566|gb|EEQ10385.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969] Length = 323 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALHYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ +++R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTG-----LESLRVLTLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A++A+AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLANASEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|295688727|ref|YP_003592420.1| trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756] gi|295430630|gb|ADG09802.1| Trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756] Length = 341 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 13/186 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK++R L A L + + L++ AA+E IH +L+HDD+ +D +RRG Sbjct: 55 GGKRLRPLLTVAAARLAASDGAGSDNDHCLKLAAAVEFIHTATLLHDDV--VDGSALRRG 112 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 K H+ + +++ G+ L AFE++ +++++ +L+ + +G + Q Sbjct: 113 KVAAHLIWGGAQSVLVGDFLFARAFELMVE-----TNSMKALEILARASRVIAEGEVM-Q 166 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 ++ D + + I + KT L A E+GA+ A Q + L+ +G NLG+ FQL Sbjct: 167 LMRSHDLNLSQALYLEIIQAKTAELFAAASEAGAVSAGVDQTRADALKAYGLNLGLAFQL 226 Query: 224 ADDLLD 229 DD LD Sbjct: 227 VDDALD 232 >gi|261820112|ref|YP_003258218.1| octaprenyl diphosphate synthase [Pectobacterium wasabiae WPP163] gi|261604125|gb|ACX86611.1| Trans-hexaprenyltranstransferase [Pectobacterium wasabiae WPP163] Length = 323 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALAYDGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S +++R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTS-----LESLRVLALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S +I+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|89894958|ref|YP_518445.1| hypothetical protein DSY2212 [Desulfitobacterium hafniense Y51] gi|89334406|dbj|BAE84001.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 326 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + A F + AL A E IH SLIHDD+ +D+ RRG PT++ Sbjct: 47 GGKRLRPLLTLQSAQCFGPLNSAALDAAVAAELIHMASLIHDDV--IDHSDRRRGIPTIN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQMLDI 167 Q A++AG+ + AF I+++ L+ S+++ + +Q M G++ Sbjct: 105 SQRGNQVAVLAGDYVFAEAFRILAN----------KHLLTSMSYLVDAIQSMCDGEIQQA 154 Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D ++ +Q F KTG L+ C SGA A A+Q E L +G NLG +Q+ Sbjct: 155 EQRCDLAVEPSQYFQRIAQKTGILLASCCCSGAASAGANQEAVEALGQYGMNLGYAYQII 214 Query: 225 DDLLD 229 DD+LD Sbjct: 215 DDILD 219 >gi|289209165|ref|YP_003461231.1| trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix] gi|288944796|gb|ADC72495.1| Trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix] Length = 322 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L T A V + + A +E IH +L+HDD+ +D +RRG T + Sbjct: 43 GGKRLRPLLATLSARACAVEGDEPVVLAAVVEFIHTATLLHDDV--VDASEMRRGNETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L + AFE++ + +R +L+ N+ +G + Q+++ Sbjct: 101 HIFGNEAAVLVGDFLYSRAFEMMVEVGS-----MRVMEILAHATNVIAEGEVM-QLMNCH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L AC+ GAI+ + E+E L +G +LG FQL DD+L Sbjct: 155 DADVDEARYMNVIQSKTAKLFEAACQLGAILGERPRAEEESLAHYGMHLGTAFQLIDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|298293858|ref|YP_003695797.1| trans-hexaprenyltranstransferase [Starkeya novella DSM 506] gi|296930369|gb|ADH91178.1| Trans-hexaprenyltranstransferase [Starkeya novella DSM 506] Length = 340 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L A+++ A++E +H +L+HDD+ +D+ +RRGK Sbjct: 59 GGKRLRPMLTLATAALSGYEGDGAVKLAASVEFMHTATLLHDDV--VDDSEMRRGKLAAR 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +R+ +LS + +G + Q+ + Sbjct: 117 MLWGNEASVLVGDFLLGQAFRMMIEVGS-----MRALDILSTAAVVIAEGEVA-QLAAAK 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L ACE G ++A + E R +G NLGI FQL DD L Sbjct: 171 NIATDEDAYLAVIRGKTAELFAAACEVGPVLAGRPEAEMAAARAYGMNLGIAFQLVDDAL 230 Query: 229 D 229 D Sbjct: 231 D 231 >gi|29840764|ref|NP_829870.1| geranyltranstransferase [Chlamydophila caviae GPIC] gi|29835114|gb|AAP05748.1| geranyltranstransferase [Chlamydophila caviae GPIC] Length = 293 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 104/203 (51%), Gaps = 11/203 (5%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + + YAL GGK+IR LV A +++ L AIE IH +LI DDLP MD+ Sbjct: 34 APVEYALTSGGKRIRPMLVCMIAKGLDMSR-DVLDAALAIEFIHTSTLIADDLPCMDDDD 92 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--------NIRSQLMLSLT 151 RRG+PTVH +DE +A++A L+ A+ I +LK +I ++ +T Sbjct: 93 ERRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLKSQGVDPKEVDIAYDIISDVT 152 Query: 152 -HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 N G+ G+LGGQ D+ + V I KTGAL AC SG + ++ Sbjct: 153 DKNFGVNGVLGGQYEDMFFKNDGPEYVQSIINKKTGALFEIACVSGWLFGGGDPLCVPQI 212 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 F + G++FQ+ DD+LD +D Sbjct: 213 IEFSQTFGLLFQMKDDILDIHQD 235 >gi|74316881|ref|YP_314621.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC 25259] gi|74056376|gb|AAZ96816.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC 25259] Length = 343 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 8/188 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A F + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 64 GGKRLRPALVLLSAGCFGYRGQAHHELAAVVEFIHTATLLHDDV--VDESELRRGRETAN 121 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ DN+ +LS N +G + Q+L+ Sbjct: 122 ALFGNAASVLVGDFLYSRAFQMMVGV-----DNMEVMRILSDATNTIAEGEVL-QLLNCH 175 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D IDE + + KT L A GA++ S+ +K+ L +G +LG FQL DD+L Sbjct: 176 DPDIDEENYLRVIRYKTAKLFEAAGRLGAVIGGGSEADKDALARYGMHLGTAFQLIDDVL 235 Query: 229 DCEEDLPK 236 D D K Sbjct: 236 DYSGDFLK 243 >gi|296284709|ref|ZP_06862707.1| geranylgeranyl pyrophosphate synthase [Citromicrobium bathyomarinum JL354] Length = 340 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L N ++ AA+E IH +L+HDD+ +D +RRGK + Sbjct: 59 GGKRLRPMLTLAGAELVGYNGTRHHKLAAAVEFIHTATLLHDDV--VDGSEMRRGKAAAN 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + ++ G+ L + AFE+++ +++ +LS I +G + Q+ + Sbjct: 117 IIFGNPATVLVGDFLFSRAFELMTE-----DGSLKVLKILSSASAIIAEGEVA-QLTSQR 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E + I KT AL A A++A S E++ L +G NLGI FQL DD L Sbjct: 171 KITTSEQRYLDIIGSKTAALFAAASRIAAVVAECSDAEEQALDDYGRNLGIAFQLVDDAL 230 Query: 229 DCEED 233 D D Sbjct: 231 DYSSD 235 >gi|304393457|ref|ZP_07375385.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130] gi|303294464|gb|EFL88836.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130] Length = 338 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + + A++E +H +L+HDD+ +D +RRGK + Sbjct: 57 GGKRLRPMLTLSAARMLGYTGDHHVTLAASVEFMHTATLLHDDV--VDESDMRRGKQSAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + ++ S + + +Q M + Sbjct: 115 MVWGNQASVLVGDFLLGQAFRMMVDAGSMEALDVLSTASMVIAEGEVMQLSAAQSMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL ACE G I+A A + ++ LR +G NLG+ FQL DD L Sbjct: 175 DDYM------AVIRGKTAALFSAACEVGPILADAGKPARDALRSYGLNLGLAFQLVDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|256822892|ref|YP_003146855.1| polyprenyl synthetase [Kangiella koreensis DSM 16069] gi|256796431|gb|ACV27087.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069] Length = 323 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A N + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 44 GGKRLRPMLLLLAAKSLNYQGKFHPNLAAVIELIHTATLLHDDV--VDESDLRRGRQTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +R +LS T N G + Q++++ Sbjct: 102 AMFGNQASVLVGDYLYSRSFQMMVEVG-----EMRVMEVLSETTNEVAAGEVL-QLMNVN 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A + AI+A AS++ +E LR +G LG FQL DD L Sbjct: 156 DPDVDEASYYQVIERKTAILFAAATQLAAILAGASKDVEEGLREYGLQLGNAFQLVDDAL 215 Query: 229 DCEED 233 D D Sbjct: 216 DYAAD 220 >gi|119502964|ref|ZP_01625049.1| Conserved hypothetical phage tail region protein [marine gamma proteobacterium HTCC2080] gi|119461310|gb|EAW42400.1| Conserved hypothetical phage tail region protein [marine gamma proteobacterium HTCC2080] Length = 321 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L AS L+ ++ A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 42 GGKRLRPLLALLAASAQGGVDLSDIKFAAVVEFIHTATLLHDDV--VDLSSLRRGRATAN 99 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF+++ +L D Q M T+ I +L Q++ Sbjct: 100 AEFGNAPSVLVGDFIYTRAFQLM----VKLGDLSLLQSMADTTNTIAAGEVL--QLMRAG 153 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E+Q + KT AL AC AI+ ++E++ +G +LGI FQ+ DD+L Sbjct: 154 DPSVTESQYLDVIDRKTAALFAAACRGSAILKGRDTTQQEQMAAYGRHLGIAFQMIDDVL 213 Query: 229 DCEED 233 D D Sbjct: 214 DYTGD 218 >gi|161527795|ref|YP_001581621.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1] gi|160339096|gb|ABX12183.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1] Length = 283 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 15/218 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 K+ID LD + + ++Y+L GGK+IR ++T A Sbjct: 20 KKIDQALD-------KELDLYSESEFIEPLKYSLEGGKRIRPIILTLSAESIGKVDDNTF 72 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E +H S+IHDD+ +DN +RR K HI+Y T+++ G+ +L + S Sbjct: 73 AASCAVEFLHMESIIHDDI--IDNETMRRQKDPFHIKYGYNTSVLTGDFVLGLILAVCSR 130 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 DN R L+ T + +G + L+ ++ + + +I+ KT A Sbjct: 131 L-----DNPRITKDLATTAMLMSEGEMIENRLETSEDVTFDDYLKVIE-YKTATAFEVAA 184 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 +GAI+A+ ++ + E L +G+N+GI +Q+ DDLLD + Sbjct: 185 RTGAIIANGTEEQIEGLTEYGKNIGIAYQIRDDLLDWK 222 >gi|153007864|ref|YP_001369079.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] gi|151559752|gb|ABS13250.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] Length = 356 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ A+E +H +L+HDD+ +D +RRGK T Sbjct: 75 GGKRLRPMMTLAAARMFGYEGDGHVRLATAVEFMHTATLLHDDV--VDESDLRRGKSTAR 132 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+++ + ++ + + +Q M + Sbjct: 133 MIWGNQASVLVGDFLLGQAFKMMVDVGSLDALDVLATSASVIAEGEVMQLAAAKNMETTE 192 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 193 DEYL------AVIKAKTAALFSAAGEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 246 Query: 229 D 229 D Sbjct: 247 D 247 >gi|304396333|ref|ZP_07378214.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB] gi|308189085|ref|YP_003933216.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1] gi|304355842|gb|EFM20208.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB] gi|308059595|gb|ADO11767.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1] Length = 323 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLSARAMGYKGDLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTS-----MGSLRILALMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A ++ AI+A A+ E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAASQASAILAEATPEEEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|126728318|ref|ZP_01744134.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Sagittula stellata E-37] gi|126711283|gb|EBA10333.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Sagittula stellata E-37] Length = 325 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 9/201 (4%) Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 M ++H R+ + + GGK++R L A L + + + A +E IH +L+ Sbjct: 25 RMASRHAPRIPEVTAHLVEAGGKRLRPMLTLASAKLCGYDGPYHVHLAATVEFIHTATLL 84 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D RRG+PT ++ +D ++++ G+ L +F++++ N+R +L Sbjct: 85 HDDV--VDESERRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTE-----TGNLRVLRIL 137 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 S +G + Q+ QD E + + KT AL A E G ++A + + Sbjct: 138 SDAAATIAEGEVL-QLTAAQDLSTTEDIYLQVVRGKTAALFSAATEVGGVIAGRPEEDVR 196 Query: 209 RLRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 197 ALFDYGDALGIAFQIVDDLLD 217 >gi|255534882|ref|YP_003095253.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium 3519-10] gi|255341078|gb|ACU07191.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium 3519-10] Length = 323 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 17/188 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V +F + A++ AIE H ++LIHDD+ MD +RR KPT+H Sbjct: 38 GGKRLRPIMVLMANDMFGGDIQKAIKPALAIEFFHNFTLIHDDI--MDEAPLRRNKPTIH 95 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGML--GGQML 165 + I++G+ LL +++ + +L K IR TH G+L GQ Sbjct: 96 TLHGLNAGILSGDALLLKSYKFFEDLEPELFKACIRV-----FTHT----GLLLCEGQQY 146 Query: 166 DIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 DI E + + +M KTG L + E GA++A + + + + FG+NLGI FQ Sbjct: 147 DINFETLGDVTFNDYIRMITYKTGVLTASSFEIGALIAGSDFKDAKAIFNFGKNLGIAFQ 206 Query: 223 LADDLLDC 230 + DD LD Sbjct: 207 IMDDYLDV 214 >gi|268323767|emb|CBH37355.1| putative geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase ; Geranyltranstransferase ; Farnesyltranstransferase ] [uncultured archaeon] Length = 357 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 33/231 (14%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLVT--ECASLFNVNHLTALRVGAA 78 D ++ AS + + +++ Y L GGK++R FL+ +C + N++ + + + Sbjct: 25 DEKIEEASKISDYTQEVVVNIKEYTLRGGKRLRPIFLIYGYKCITEDNIDAI--IEASIS 82 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNG 122 IE + Y LIHDD+ MD +RRGKPT HI+Y+ + AI+AG+ Sbjct: 83 IELMQSYLLIHDDI--MDEDELRRGKPTFHIEYENICATLFGDDDTRKFGENIAILAGDL 140 Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 L Y +++++ + + + R+ Q + N+G GQ+LDI E I E ++ Sbjct: 141 LEAYGIDVLTNSRFKEEYITRALQKYAEIVKNVGY-----GQILDIMSEKKKDITEAEIL 195 Query: 179 MIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 I K+KT + + GAI+A A + + + +G LG+ FQ+ DD+L Sbjct: 196 RIHKLKTASYTIENPLQIGAILAGAVEADLAVMSNYGLPLGLAFQIQDDIL 246 >gi|320354672|ref|YP_004196011.1| poluprenyl synthetase [Desulfobulbus propionicus DSM 2032] gi|320123174|gb|ADW18720.1| Polyprenyl synthetase [Desulfobulbus propionicus DSM 2032] Length = 338 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 9/188 (4%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 + YAL GGK+IR L C+ + ++ AA E +H +L+HDD+ +D R Sbjct: 46 VHYALFNGGKRIRPLLTVLCSRCCGRDDAELYQLAAAFEYLHVATLVHDDV--IDRAEQR 103 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG PTV ++ AI+AG+ L ++ +I I Q S+ + Q L Sbjct: 104 RGTPTVVARHGLTAAILAGDWLHAHSMHLIGKLAGGRGLEIFCQATASMVNGEFAQLRLI 163 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 G + E Q F + + KTG L+ C GA+ A A + + L +G+ +G F Sbjct: 164 GDITGT------EQQYFEVIRQKTGNLIRSTCSIGALFAGADEARRTALATYGDRIGAAF 217 Query: 222 QLADDLLD 229 Q+ DDLLD Sbjct: 218 QVVDDLLD 225 >gi|307129369|ref|YP_003881385.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937] gi|306526898|gb|ADM96828.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937] Length = 323 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLTARALNYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLAS-----LRVMSVMSDAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A ++ AI++ AS ++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEDSYMRVIYSKTARLFEAAAQASAILSGASSEQELALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|224588345|gb|ACN58969.1| octaprenyl diphosphate synthase [uncultured bacterium BLR10] Length = 348 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV A+ ++ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 69 GGKRIRPVLVLLVANAYSYKGTAHHELAAVVEFIHTATLLHDDV--VDESSLRRGRATAN 126 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ +N+R +LS N+ +G + Q+L++ Sbjct: 127 ALFGNAASVLVGDFLYSRAFQMMVG-----LNNMRVMQILSDATNVIAEGEVL-QLLNMH 180 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + + KT L A E GA+++ A+ + E +G +LG FQL DD+L Sbjct: 181 DPDVSQERYLQVIRSKTAKLFEAAAELGALVSGANDAQIEAAGEYGRSLGTAFQLIDDVL 240 Query: 229 DCEED 233 D D Sbjct: 241 DYAGD 245 >gi|83311261|ref|YP_421525.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] gi|82946102|dbj|BAE50966.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] Length = 339 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L +++ A +E IH +L+HDD+ +D +RRG+ + + Sbjct: 58 GGKRLRPVLTLASAKLAGHTGERHIKLAACVEFIHTATLLHDDV--VDESELRRGQASAN 115 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + +FE++ ++D S L +LS ++ +G + Q++ Sbjct: 116 ALFGNKPSVLVGDFLFSRSFELM------VEDGSLSVLAILSRASSVIAEGEVL-QLITA 168 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E + + KT AL AC GA++A + E+E L +G NLGI FQL DD+ Sbjct: 169 NDTETSEDSYLEVIRSKTAALFAAACRIGAVVADRPKVEEEALESYGLNLGIAFQLIDDV 228 Query: 228 LD 229 LD Sbjct: 229 LD 230 >gi|152980282|ref|YP_001354685.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille] gi|151280359|gb|ABR88769.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille] Length = 334 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 97/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV A+ + ++ A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 55 GGKRIRPVLVLLMANAYGYRGTDHHQLAAVVEFIHTATLLHDDV--VDESSLRRGRKTAN 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ S +IR +L+ N+ +G + Q+L++ Sbjct: 113 ALFGNAASVLVGDFLYSRAFQMMVSVG-----DIRIMQILADATNVIAEGEVL-QLLNMH 166 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + + KT L A + G ++A AS +E E +G +LG FQL DD+L Sbjct: 167 DPDVSEERYTQVIRSKTAKLFEAAAQLGTLIAGASDDEIEAAAEYGRSLGTAFQLIDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|326385511|ref|ZP_08207150.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM 19370] gi|326210050|gb|EGD60828.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM 19370] Length = 337 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L ++ AA+E IH +L+HDD+ +D +RRGK + Sbjct: 56 GGKRMRPMLTLAGAELVGYGGSRHYKLAAAVEFIHTATLLHDDV--VDGSDMRRGKKAAN 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I Y ++ G+ L + +FE++ +I+ +LS I +G + Q++ + Sbjct: 114 IIYGNPATVLVGDFLFSRSFELMVE-----DGSIKVLRILSNASAIITEGEVD-QLIAQR 167 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + I KT AL AC A++A ++E+ L +G +LG FQLADD + Sbjct: 168 EIETSEERYLAIINGKTAALFAAACRIAAVVAERPEDEELALDAYGRHLGTAFQLADDAI 227 Query: 229 DCEED 233 D + D Sbjct: 228 DYDSD 232 >gi|330508369|ref|YP_004384797.1| bifunctional short chain isoprenyl diphosphate synthase [Methanosaeta concilii GP-6] gi|328929177|gb|AEB68979.1| bifunctional short chain isoprenyl diphosphate synthase [Methanosaeta concilii GP-6] Length = 319 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 11/185 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A L +IE +H ++LIHDD+ MDN +RRG+P VH Sbjct: 39 GGKRLRPSMLLLAAEAAGGEALALAPAAVSIELVHNFTLIHDDI--MDNADVRRGRPAVH 96 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + AI+AG+ L + AF+++ + + + MLS T + GQ LD++ Sbjct: 97 KIWGQSGAILAGDTLYSKAFQVLGMTAASPERILGAMNMLSRT----CTAICEGQWLDME 152 Query: 169 ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D + + MI+K KTG L + G ++A AS L FG G+ FQL Sbjct: 153 FESKDRVTENEYMEMIEK-KTGVLYGASAGMGGLLAGASPEVVRALDEFGRLTGMGFQLQ 211 Query: 225 DDLLD 229 DD++D Sbjct: 212 DDVID 216 >gi|329767887|ref|ZP_08259401.1| hypothetical protein HMPREF0428_01098 [Gemella haemolysans M341] gi|328838675|gb|EGF88274.1| hypothetical protein HMPREF0428_01098 [Gemella haemolysans M341] Length = 315 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 13/198 (6%) Query: 36 NDRLLSAI-RYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDL 92 +DRL I RY L GGK++R L+ CA L F +N +R+ + +E IH SLIHDD+ Sbjct: 24 DDRLNEIIKRYFLNGGKRVRVLLLLMCAKLGNFELNRKDIIRMASIVEIIHTASLIHDDI 83 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLT 151 +DN RRG T++ +Y A+ G+ Y F I+ + + D I + L +L Sbjct: 84 --IDNADTRRGSITMNKEYTNEFALHVGD----YLFAIVLNEVAKFSDERIHNYLAETLK 137 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + + + +I+ ID + K KT L+ FAC +G+I++ AS + Sbjct: 138 ELCIGELIQADGLYNIKTRRIDYLKKI---KRKTAILIAFACVAGSIVSKASDENIKSAF 194 Query: 212 CFGENLGIIFQLADDLLD 229 +G LG+ +Q+ DD LD Sbjct: 195 SYGYYLGMSYQIIDDYLD 212 >gi|15678079|ref|NP_275193.1| bifunctional short chain isoprenyl diphosphate synthase [Methanothermobacter thermautotrophicus str. Delta H] gi|3334232|sp|O26156|IDSA_METTH RecName: Full=Bifunctional short chain isoprenyl diphosphate synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; AltName: Full=Geranyltranstransferase gi|2621086|gb|AAB84557.1| bifunctional short chain isoprenyl diphosphate synthase [Methanothermobacter thermautotrophicus str. Delta H] Length = 325 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 78/230 (33%), Positives = 119/230 (51%), Gaps = 29/230 (12%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 + I I + LL+ + H+ T GGKKIR L + + A Sbjct: 21 ESISDITPETLLRASEHLITA--------------GGKKIRPSLALLSSEAVGGDPGDAA 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IIS 132 V AAIE IH +SLIHDD+ MD+ IRRG+P VH+ + E AI+AG+ L + AFE +I Sbjct: 67 GVAAAIELIHTFSLIHDDI--MDDDEIRRGEPAVHVLWGEPMAILAGDVLFSKAFEAVIR 124 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKM--KTGALM 189 + +++ ++ L + + + + GQ LD+ +E +D T+ ++ + KT AL+ Sbjct: 125 NGDSEM---VKEALAVVVDSCVKI---CEGQALDMGFEERLDVTEEEYMEMIYKKTAALI 178 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A ++GAIM S E L +G +G+ FQ+ DD LD EE L K Sbjct: 179 AAATKAGAIMGGGSPQEIAALEDYGRCIGLAFQIHDDYLDVVSDEESLGK 228 >gi|222478679|ref|YP_002564916.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239] gi|222451581|gb|ACM55846.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 280 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 13/187 (6%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK++R + F+ + A+ A IE +H SL+ DD+ +D +RRG P+ Sbjct: 36 LAGGKRVRPAVTILACEAFDGDPDAAVDFAAGIEFVHNASLVIDDI--IDRSEVRRGTPS 93 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +Y AIIA +GLL AF + S+ ++ ++ ++ L G+ + Sbjct: 94 AWAEYGYGPAIIASDGLLGEAFALFSADPRAMR--TVAEALVELGE---------GEATE 142 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + E + + + KTGAL A E GAI A + + + E +G+ FQ+ DD Sbjct: 143 LAARPTTEAEYMELARRKTGALFRAAAELGAIAGGADSHAVDSFGEYAERVGVAFQMRDD 202 Query: 227 LLDCEED 233 +LD D Sbjct: 203 VLDATAD 209 >gi|262277442|ref|ZP_06055235.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114] gi|262224545|gb|EEY75004.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114] Length = 337 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 19/227 (8%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECA 62 + S QE K++D D + L+ +SH++ L+ + L+ GGK++R L + Sbjct: 19 IKSAYQEQLKKVD---DHIKLKLSSHVE------LVGEMATHLMSTGGKRLRPLLTICSS 69 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +FN + + A +E IH +L+HDD+ +D RRG T + + ++I+AG+ Sbjct: 70 EIFNYKGNRHINLAACVELIHNATLLHDDV--IDKSESRRGFKTTNAIWGNKSSILAGDY 127 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 LL+ FE++ +Q I S + + +Q Q+ ++ ++D I Sbjct: 128 LLSRCFEMMVDDGSQEVLKILSSVSSEIAQGEIMQLQFEKQVDMVEKNYLD------IIS 181 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L + G + S EKE L +G NLGI FQ+ DD+LD Sbjct: 182 AKTASLFGASMRVGGCINDRSNKEKEALESYGRNLGICFQITDDILD 228 >gi|103486007|ref|YP_615568.1| trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256] gi|98976084|gb|ABF52235.1| Trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256] Length = 337 Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L C L + ++ AA+E IH +L+HDD+ +D +RRG+ T + Sbjct: 56 GGKRMRPMLTLACGRLLDYPGRRHCKLAAAVEFIHTATLLHDDV--VDKSDLRRGRKTAN 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ L + AFE++ +++ +LS + +G + L Q Sbjct: 114 VIWGNSASVLVGDFLFSRAFEVMVE-----DGSLKVLKILSRASAVIAEGEV--NQLSAQ 166 Query: 169 DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 E Q I KT L AC+ A++A + + L +G NLGI FQL DD Sbjct: 167 RRIETSEDQYLAIINAKTAELFAAACKIAAVVAERDEATEAALDAYGRNLGIAFQLVDDA 226 Query: 228 LDCEED 233 +D D Sbjct: 227 IDYVSD 232 >gi|254283313|ref|ZP_04958281.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium NOR51-B] gi|219679516|gb|EED35865.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium NOR51-B] Length = 292 Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AI 79 DL A+ + +L +A+ YA+ GG ++R L A+ + + A AI Sbjct: 11 DLERAVAAGADERCPPQLANALHYAVFPGGARVRPQLCMAVAAANTGKDPSLAKSAACAI 70 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +HC SL+HDDLP D+ +RRGKP+VH + E A++ G+ L+ AF++++ + Sbjct: 71 ELLHCASLVHDDLPCFDDATVRRGKPSVHSAFGERIAVLTGDALIVMAFQVLAKGMATAR 130 Query: 140 DNIRSQLMLSLTHN--IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 R ++ + G+ GQ + + + + + KTGAL + Sbjct: 131 YPDRGPAVMGYVADGVAAPCGIAAGQAWECE----QRVDLALYHQSKTGALF---IAATC 183 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 A A+ + R G ++G +Q+ADD+ D D+ Sbjct: 184 AGAAAAGVDPTPWRNLGASIGEAYQVADDIKDATSDI 220 >gi|21222966|ref|NP_628745.1| polyprenyl diphosphate synthase [Streptomyces coelicolor A3(2)] gi|289769814|ref|ZP_06529192.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24] gi|10129728|emb|CAC08284.1| putative polyprenyl diphosphate synthase [Streptomyces coelicolor A3(2)] gi|289700013|gb|EFD67442.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24] Length = 336 Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG P+ + Sbjct: 53 GGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++D A++ G+ L A +I++ + +R Q + + ++ GQ+L Sbjct: 111 TRWDNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ +C GA+M+ A + + L +GE LG+ Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGV 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDIASD 228 >gi|315646428|ref|ZP_07899546.1| Trans-hexaprenyltranstransferase [Paenibacillus vortex V453] gi|315278071|gb|EFU41391.1| Trans-hexaprenyltranstransferase [Paenibacillus vortex V453] Length = 324 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 18/186 (9%) Query: 49 GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R V ++++ L V +E IH SL+HDD+ +D+ RRGKPT Sbjct: 43 GGKRLRPVFVLMGGKFGDYDIDKLK--HVAVPLELIHSASLVHDDV--IDDADTRRGKPT 98 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 V ++D A+ G+ + A E+ + K I ++ M+ ++ G+M Sbjct: 99 VKAKWDNRIAMYTGDYIYGKALELTTHLKQPEIHQILAKAMVEMSI---------GEMEQ 149 Query: 167 IQDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+D F E V ++++ + KT L+ +C+ GA+ A A + L FG N+G+ FQ+ Sbjct: 150 IRDFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGALAADADRQVANSLYRFGYNVGMAFQI 209 Query: 224 ADDLLD 229 DDLLD Sbjct: 210 QDDLLD 215 >gi|325981722|ref|YP_004294124.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212] gi|325531241|gb|ADZ25962.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212] Length = 322 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A F + + A IE IH +L+HDD+ +D +RR + T + Sbjct: 43 GGKRLRPALVILSAGAFGYSGKFHYNLAAVIEFIHTATLLHDDV--VDESELRRNRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ DN+R Q++ T+ I +L Q+L+ Sbjct: 101 ALFGNAASVLVGDFLYSRAFQMMVEV-----DNMRVMQVLADATNTIAEGEVL--QLLNC 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D + E + + KT L A GAI+ +A+ E+ + +G +LG FQL DD+ Sbjct: 154 RDPQVSEENYLQVIRFKTAKLFEAASRLGAILGNATSEEENAMAVYGMHLGTAFQLVDDM 213 Query: 228 LD 229 LD Sbjct: 214 LD 215 >gi|317046711|ref|YP_004114359.1| polyprenyl synthetase [Pantoea sp. At-9b] gi|316948328|gb|ADU67803.1| Polyprenyl synthetase [Pantoea sp. At-9b] Length = 323 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLSARALNYQGSQHITNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S +++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTS-----MGSLKILALMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A ++ AI+A A+ +++ L+ +G +G FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYIGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|256785921|ref|ZP_05524352.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24] Length = 298 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG P+ + Sbjct: 15 GGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSAN 72 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++D A++ G+ L A +I++ + +R Q + + ++ GQ+L Sbjct: 73 TRWDNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 122 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ +C GA+M+ A + + L +GE LG+ Sbjct: 123 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGV 176 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 177 AFQLADDVLDIASD 190 >gi|288801789|ref|ZP_06407231.1| octaprenyl-diphosphate synthase [Prevotella melaninogenica D18] gi|288335831|gb|EFC74264.1| octaprenyl-diphosphate synthase [Prevotella melaninogenica D18] Length = 326 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK++R L+ A F +E +H SL+HDD+ +D RRG+ +V+ Sbjct: 44 AGKRMRPILILLMAKNFGKVSEATQHAAVGLELLHTASLVHDDV--VDEAAARRGQASVN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 YD A++ G+ +L+ A +S +++ ++L +L+ LQ + +IQ Sbjct: 102 ADYDNKVAVLVGDYVLSTALLHVSYTHSEIIVRYLAELGRTLSDGEILQ------LWNIQ 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 ++ I E + I + KT AL GA A+AS E E R FG++LGI+FQ+ DD+ Sbjct: 156 NKEITEEVYYKIIERKTAALFESCAAIGAESANASDEEVEAARLFGKHLGIVFQIRDDIF 215 Query: 229 D 229 D Sbjct: 216 D 216 >gi|332827843|gb|EGK00578.1| hypothetical protein HMPREF9455_03221 [Dysgonomonas gadei ATCC BAA-286] Length = 323 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 21/202 (10%) Query: 35 HNDRLLSAIRYALLG-GKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIH 89 +N R+ I Y + GK+IR L+ C + N + +A+ V E +H SLIH Sbjct: 29 NNVRIQEIIDYIMKSDGKRIRPILLLLAAKACGEINNTTYNSAITV----ELLHTASLIH 84 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D IRRG +++ YD A++AG+ L+ A K+ L NI ++S Sbjct: 85 DDV--VDESKIRRGMASLNAIYDNKMAVLAGDYFLSTAL-----IKSVLTGNIE---IIS 134 Query: 150 LTHNIGLQGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 ++G G Q+ +++ +DE + F + + KT +LM GA+ AS E Sbjct: 135 RVSDLGRDLAEGELNQLSLVKELILDEDEYFQVIRKKTASLMSVCMRIGAMSVDASSEEV 194 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 ER GE LG+ FQL DD+ D Sbjct: 195 ERFTKLGEYLGVCFQLRDDIFD 216 >gi|238761751|ref|ZP_04622725.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638] gi|238699865|gb|EEP92608.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638] Length = 323 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALGYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S +++R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTS-----LESLRVLTLMSAATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S AI++ A+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAILSDATPEQELTLQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|315121918|ref|YP_004062407.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495320|gb|ADR51919.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 322 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 11/189 (5%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 ++Y + GGK++R L A + + + AIE IH +L+HDD+ +D+ +R Sbjct: 34 VKYLIFSGGKRLRPMLTVATALMLEYRGNNHVLLACAIEFIHTATLLHDDV--VDDSALR 91 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RGK + + +++ G+ LL+ AF ++ K+Q + S + +L+ +G L Sbjct: 92 RGKAAARLVWGNQASVLVGDFLLSQAFSMVIETKSQEALKVLSLVACTLS-----EGEL- 145 Query: 162 GQMLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + L I + E + K KT AL A E ++++ A + ++ L+ +G NLGI Sbjct: 146 -RQLSISKNLNVTEEDYLYVIKSKTAALFVAALEVSSLISGAQDSVRDALKSYGTNLGIA 204 Query: 221 FQLADDLLD 229 FQL DD LD Sbjct: 205 FQLVDDALD 213 >gi|39996419|ref|NP_952370.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA] gi|39983299|gb|AAR34693.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA] gi|298505429|gb|ADI84152.1| octaprenyl diphosphate synthase [Geobacter sulfurreducens KN400] Length = 322 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L+ A L + + + IE IH +L+HDD+ +DN +RRG + + Sbjct: 41 GGKRIRPMLLLLSAKLCGYQGDRHVPLASVIEFIHTATLLHDDV--VDNATLRRGNASAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F ++ ++R ++S I +G + Q+L Sbjct: 99 EVWGNEASVLVGDFLFSKSFSLMVEAG-----DLRILKVISGATTIIAEGEVL-QLLCTS 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + K KT L+ ACE+GAI+ +S ++E LR FG +LGI FQL DD L Sbjct: 153 DLEMTQERYIEVVKSKTAVLLSAACEAGAILGTSSAEQQEALRDFGMDLGIAFQLMDDTL 212 Query: 229 D 229 D Sbjct: 213 D 213 >gi|224476589|ref|YP_002634195.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus carnosus subsp. carnosus TM300] gi|222421196|emb|CAL28010.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus carnosus subsp. carnosus TM300] Length = 318 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 100/185 (54%), Gaps = 15/185 (8%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R SF+V N + ++ ++E IH +L+HDD+ +D RRG+ T+ Sbjct: 39 GGKRVRPSFVVLSSEYGVNPRNEDTYKIAVSLELIHMATLVHDDV--IDRSDKRRGRLTI 96 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++D+ TAI+ GN LL A ISS + + R ++LS + + G++ Sbjct: 97 SKKWDQETAILTGNYLLALALNNISSIQDK-----RIHIILS----NAIVDVCRGELFQF 147 Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 QD+F ++T ++++ KT L+ A E GA+ A+A +L+ G +G+ FQ+ Sbjct: 148 QDQFNSNQTITNYLRRINRKTALLIQLATELGALSANADLKTANKLKRIGHYIGMSFQIV 207 Query: 225 DDLLD 229 DD+LD Sbjct: 208 DDVLD 212 >gi|57234813|ref|YP_181134.1| heptaprenyl diphosphate synthase component II [Dehalococcoides ethenogenes 195] gi|57225261|gb|AAW40318.1| heptaprenyl diphosphate synthase component II [Dehalococcoides ethenogenes 195] Length = 324 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 14/208 (6%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 + S + Q + + Y L+GGK +R L A F L + + E +H Sbjct: 22 FKLVSESRKQSFPEMAEMLDYILVGGKVLRPALSMLSAMCFGTGIKKVLPLATSSEMLHI 81 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD ++D RR + TV+ + AI+ G+ L +A E+ + DN+R Sbjct: 82 ATLVHDD--AIDKADTRRSRRTVNSVWGLEKAILLGDFLFAHAAEVAAE-----TDNMRI 134 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAH 201 + + T LQ + G++ F D++ ++++ KT AL A + GAI+A Sbjct: 135 VTLFAQT----LQIIASGELKQAYASFNPDQSYENYLERISGKTAALFVMATKGGAILAD 190 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229 AS +++E +R +G NLG+ FQ+ DD+LD Sbjct: 191 ASPSDEEIMRSYGYNLGLSFQIVDDILD 218 >gi|302344811|ref|YP_003813164.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845] gi|302149655|gb|ADK95917.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845] Length = 326 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK++R L+ A F +E +H SL+HDD+ +D RRG+ +V+ Sbjct: 44 AGKRMRPILILLMAKNFGKVSEATQHAAVGLELLHTASLVHDDV--VDEAAARRGQASVN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 YD A++ G+ +L+ A +S +++ ++L +L+ LQ + +IQ Sbjct: 102 ADYDNKVAVLVGDYVLSTALLHVSYTHSEIIVRYLAELGRTLSDGEILQ------LWNIQ 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 ++ I E + I + KT AL GA A+AS E E R FG++LGI+FQ+ DD+ Sbjct: 156 NKEITEEVYYKIIERKTAALFESCAAIGAESANASDEEVEAARLFGKHLGIVFQIRDDIF 215 Query: 229 D 229 D Sbjct: 216 D 216 >gi|291299508|ref|YP_003510786.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728] gi|290568728|gb|ADD41693.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728] Length = 368 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 15/183 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L CA A+ A+E +H +SL+HDD+ +D RR + TV Sbjct: 66 GGKALRPALTLLCAEAAGGQADEAVPAAVAVELVHNFSLLHDDV--IDGDRTRRHRATVW 123 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + TAI+AG+ LL+ AFE+++ + + ++ + L GQ+ D+ Sbjct: 124 AVFGRPTAILAGDSLLSLAFEVLAESRPA-GVGVLAEAVTRLND---------GQLRDMD 173 Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + + + M KTGALM AC GA A R FG LG+ FQ AD Sbjct: 174 LETRVDVSLAECRDMAARKTGALMAAACRLGAESGGADGERAGRFADFGGALGLAFQAAD 233 Query: 226 DLL 228 DLL Sbjct: 234 DLL 236 >gi|51594815|ref|YP_069006.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP 32953] gi|153949434|ref|YP_001402567.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP 31758] gi|170025973|ref|YP_001722478.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis YPIII] gi|186893824|ref|YP_001870936.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis PB1/+] gi|51588097|emb|CAH19703.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP 32953] gi|152960929|gb|ABS48390.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP 31758] gi|169752507|gb|ACA70025.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII] gi|186696850|gb|ACC87479.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+] Length = 323 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALNYQGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLQS-----MRVLTLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S AI++ AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEESYMQVIYSKTARLFEAAAQSAAILSDASEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|23014219|ref|ZP_00054047.1| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum magnetotacticum MS-1] Length = 339 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L +++ A +E IH +L+HDD+ +D +RRG+ + + Sbjct: 58 GGKRLRPVLTLASAKLAGHTGERHIKLAACVEFIHTATLLHDDV--VDESELRRGQASAN 115 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + +FE++ ++D S L +LS ++ +G + Q++ Sbjct: 116 ALFGNKPSVLVGDFLFSRSFELM------VEDGSLSVLAILSHASSVIAEGEVL-QLITA 168 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E + + KT AL AC GA++A + E+E L +G NLGI FQL DD+ Sbjct: 169 NDTETSEDSYLEVIRSKTAALFAAACRIGAVVADRPKVEEEALESYGLNLGIAFQLIDDV 228 Query: 228 LD 229 LD Sbjct: 229 LD 230 >gi|188532487|ref|YP_001906284.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99] gi|188027529|emb|CAO95376.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99] Length = 324 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 15/189 (7%) Query: 49 GGKKIRSFLVTECASLFN----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK+IR + A N H+T V A IE IH +L+HDD+ +D +RRGK Sbjct: 43 GGKRIRPMIAVLAARAINDYAGKQHIT---VAALIEFIHTATLLHDDV--VDESDMRRGK 97 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ + T AF++++S + ++ ++S N+ +G + Q+ Sbjct: 98 ATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QL 151 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ D I E + KT L A +S AI+A A+ ++++ L+ +G +G FQL Sbjct: 152 MNCNDPDITEESYMRVIYSKTARLFEAAAQSSAILAGATASQEQALQDYGRYIGTAFQLI 211 Query: 225 DDLLDCEED 233 DDLLD D Sbjct: 212 DDLLDYSAD 220 >gi|311895176|dbj|BAJ27584.1| putative polyprenyl diphosphate synthase [Kitasatospora setae KM-6054] Length = 357 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 7/184 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A N + G ++E +H +SL+HDDL MD RR + T Sbjct: 63 GGKAVRPALALLSAEAVGANAQVGVPGGVSVELVHNFSLLHDDL--MDGDETRRHRATAW 120 Query: 109 IQYDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + A++AG+ L T E++ + T D + + + L + ++ GQ LD+ Sbjct: 121 TVFGPAQAVLAGDALATLGTEVLLDAAVTGGADPVDAARAVRLI-TTATRRLIDGQALDV 179 Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E D V ++ KTGAL+ + GA++A A + L+ +G +LG+ FQ Sbjct: 180 SFEQRDAVTVEECLAMEGGKTGALLAASAAIGAVLAGADDRVSDALQRYGYHLGLAFQAV 239 Query: 225 DDLL 228 DDLL Sbjct: 240 DDLL 243 >gi|254462754|ref|ZP_05076170.1| geranylgeranyl pyrophosphate synthase [Rhodobacterales bacterium HTCC2083] gi|206679343|gb|EDZ43830.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium HTCC2083] Length = 333 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 9/204 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + + A +E IH +L+H Sbjct: 33 MASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYDGPYHVHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L + +F+++ + +I + + Sbjct: 93 DDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSMRVLDILANASAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + QD E + + KT AL A E G ++A A + + Sbjct: 151 IAEGEVLQ------LTASQDLSTTEAIYLQVVRGKTAALFSAATEVGGVIAGADEAHVKA 204 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L +G+ LGI FQ+ DDLLD D Sbjct: 205 LFDYGDALGIAFQIVDDLLDMSGD 228 >gi|188585880|ref|YP_001917425.1| Polyprenyl synthetase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350567|gb|ACB84837.1| Polyprenyl synthetase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 337 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 23/189 (12%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK R LV A++ V+ L+ A E IH SL+HDD+ +DN RRGK TV+ Sbjct: 46 GKLFRPVLVYLSANIHQVDKDRVLKTAMASELIHLASLVHDDI--IDNSDYRRGKQTVNY 103 Query: 110 QYDEVTAIIAGNGLLTYAFEI---ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + +A++ G+ L + AF I I SPK +M T I M G+++ Sbjct: 104 YWGNKSAVLVGDYLFSKAFSILAMIDSPK----------IMALFTDAIS--KMCQGELIQ 151 Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHA---SQNEKERLRCFGENLGII 220 + + F I F + + KT AL+ CESGAI++ S L+ +G +LG Sbjct: 152 LNNAFKSGISREIYFKVIEYKTAALLAACCESGAILSSGNGKSCKSAAALKNYGLHLGRA 211 Query: 221 FQLADDLLD 229 +Q+ DD++D Sbjct: 212 YQIIDDVMD 220 >gi|118576854|ref|YP_876597.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase [Cenarchaeum symbiosum A] gi|118195375|gb|ABK78293.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase [Cenarchaeum symbiosum A] Length = 272 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 10/196 (5%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 L +RYA+ GGK+IR ++ A A+E +H S+IHDD+ +D+ Sbjct: 27 LTGPLRYAITGGKRIRPIILVLAAESVGSADDNTYAAACAVELLHTESVIHDDI--IDDE 84 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RR K HI+Y + T+I+ G+ +L +I S DN+R LS T + +G Sbjct: 85 TMRRHKDPFHIKYGQNTSILTGDFVLGLILKICSR-----LDNVRIADDLSTTAMMMSEG 139 Query: 159 -MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 + G++ + D D+ + + KT A + GAI+ S+ + E L FG+N+ Sbjct: 140 EAIEGRLENSGDVTFDD--YLKVIEYKTATAFEVASKIGAILGGGSERQVEDLTGFGKNI 197 Query: 218 GIIFQLADDLLDCEED 233 GI +Q+ DDL D + + Sbjct: 198 GIAYQIKDDLNDWKNE 213 >gi|288931665|ref|YP_003435725.1| polyprenyl synthetase [Ferroglobus placidus DSM 10642] gi|288893913|gb|ADC65450.1| Polyprenyl synthetase [Ferroglobus placidus DSM 10642] Length = 301 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 21/186 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R +V A L + L + A+E IH SL HDD+ +D G RR K T++ Sbjct: 39 GGKRTRPIIVLLSAKLAGGDEKEILDMALAVELIHTASLAHDDV--IDRGVKRRNKETLN 96 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQMLD 166 ++YD+ AI+ G+ L++ + ++ ++ + + GML G++LD Sbjct: 97 VKYDDSLAILVGDWLISKSVQLT------------AKYGYDIVRDFAKTGMLMSEGEVLD 144 Query: 167 IQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQL 223 + E DE F + KT AL ++ ++ + SQ+E E+L +G NLGI +QL Sbjct: 145 VYSTKEKFDEEDYFKCIEYKTAALFAYSAKNA--YQYFSQDEGVEKLFQYGLNLGIAYQL 202 Query: 224 ADDLLD 229 DDLL+ Sbjct: 203 VDDLLE 208 >gi|1229166|gb|AAB67731.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 222 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 10/153 (6%) Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNI 142 SLIHDDLP MDN +RRGKPT H Y E A++AG+ LL AFE ++SS + I Sbjct: 3 SLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMI 62 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGA 197 R+ ++ L IG G++ GQM+D+ E ++ +V + I KT AL+ A G Sbjct: 63 RA--VVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGV 120 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 IM ++ E E+LR + +G++FQ+ DD+LD Sbjct: 121 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDV 153 >gi|313204660|ref|YP_004043317.1| polyprenyl synthetase [Paludibacter propionicigenes WB4] gi|312443976|gb|ADQ80332.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4] Length = 328 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 12/188 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK++R LV A L + + A+E +H SLIHDD+ +D+ RRGKP+++ Sbjct: 48 SGKQLRPMLVLLSAKLCGHVNQNTVDGALALELLHTASLIHDDV--VDDTLERRGKPSIN 105 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLD 166 ++ AI++G+ +L+ A ++ + KT S +L NIG+Q G Q+ + Sbjct: 106 ARWTNKIAILSGDYILSKA--LVCATKTN------SLPVLKSIANIGMQLSDGELLQLSN 157 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 +Q E I + KT L E G + +A+++ RLR FGE LGI FQ+ DD Sbjct: 158 VQVLNASEENYLTIIRKKTALLFSTCTEVGGLSVNAAEDTLVRLRNFGEYLGICFQIKDD 217 Query: 227 LLDCEEDL 234 + D E++ Sbjct: 218 IFDYSENI 225 >gi|33519569|ref|NP_878401.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus] gi|33517232|emb|CAD83615.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus] Length = 324 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKKIRS ++ A N + IE IH +L+HDD+ +D+ RRGK T + Sbjct: 43 GGKKIRSTMILLIAKSLTYNKTQHTILATLIEFIHTATLLHDDV--IDHSTTRRGKTTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 I + +I+ G+ + T AF++++ ++S +LSL + + + G++L + Sbjct: 101 IIFGNPASILIGDFIYTRAFQMMTE--------LQSLRILSLMAD-AVNIIAEGEILQLT 151 Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D I I KT L A +S AI+AHA+ +++ L +G+ +GI FQL D Sbjct: 152 YCNDPTITMNNYMQIIYKKTARLFEVASQSSAILAHANIQQEQALSNYGKYIGIAFQLID 211 Query: 226 DLLD 229 DLLD Sbjct: 212 DLLD 215 >gi|83594313|ref|YP_428065.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170] gi|25989734|gb|AAN75038.1| CrtE [Rhodospirillum rubrum] gi|83577227|gb|ABC23778.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170] Length = 289 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 14/219 (6%) Query: 20 LDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFL-VTECASLFNVNHLTALRVG 76 +D++L T + LL+ A+R+A+ GG ++R L + A+ N A Sbjct: 7 IDNVLEATMTRADLPDAPPLLAKAMRHAVFPGGGRLRPRLTLAVAAACGNDLPAAADAAA 66 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AAIE +HC SL+HDDLP D+ + RRG+ +VH+ Y E A++AG+ L+ AF+ ++S Sbjct: 67 AAIELLHCASLVHDDLPCFDDAHSRRGQASVHVAYGEPLAVLAGDALIVMAFQGLASGLA 126 Query: 137 QLKDNIRSQLMLSLTHN-IGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 + + R L+L + + +G+ G+ GQ + + ++ Q+ KTGAL + Sbjct: 127 MVPE--RLPLLLGIVADAVGMPAGICAGQAWESE----PTVKLAEYQRAKTGALFAASTM 180 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + A A+ E R GE LG +Q+ADDL D D Sbjct: 181 A---GAAAAGREARSWRMLGECLGEAYQVADDLRDVAAD 216 >gi|300115547|ref|YP_003762122.1| trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113] gi|299541484|gb|ADJ29801.1| Trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113] Length = 322 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 117/226 (51%), Gaps = 14/226 (6%) Query: 17 DTILDDLLLQTASHMQTQHNDR-LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTAL 73 D + DD+ A Q H+D L++ + + ++ GGK++R +V A F+ + Sbjct: 8 DLVADDMRSVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFDYQGSYHI 67 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + A IE IH +L+HDD+ +D+ +RRG+ T + + +++ G+ L + AFE++ Sbjct: 68 DIAAIIEFIHTATLLHDDV--VDSSELRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVG 125 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 D++R +L+ T N +G + Q+L+ + E I + KT L A Sbjct: 126 -----VDSMRVMEILARTTNTIAEGEVM-QLLNCHEPDTTEECYLEIIRSKTAKLFEAAT 179 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + GA++ H S E++ + +G +LG FQL DD+LD EDL K Sbjct: 180 QLGAVLCHRSSAEEKLMATYGMHLGTAFQLTDDVLDYSAFSEDLGK 225 >gi|58584789|ref|YP_198362.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419105|gb|AAW71120.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 328 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 14/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKK+R LV + N + ++V A++E IH +L+HDD+ +D R G T + Sbjct: 50 GGKKVRPKLVFIICKMLNYSGEDRVKVAASVEFIHNATLLHDDV--LDESEARHGVKTAN 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++I+ G+ LLT AF + NI S ++ +H ++ G++ + Sbjct: 108 KIWGNKSSILVGDLLLTLAFRWLIECGNL---NILS-ILSGASH-----SLVNGEIKQMA 158 Query: 169 DEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 F T F I KT +L CE+ +++++A+ NE ERL+ FG N G+ FQ+ D Sbjct: 159 ARFNSHTIRKNYFDIIGKKTASLFSACCEAASVISNATSNETERLKNFGLNFGMAFQIID 218 Query: 226 DLLDCEED 233 D LD D Sbjct: 219 DTLDYTAD 226 >gi|1813470|gb|AAB41847.1| spore germination protein C3 [Bacillus firmus] Length = 288 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A+ F + L+ + +E +H SL+HDD+ +D+ +RRGK TV Sbjct: 50 GGKRIRPVFVL-LAAKFGTYDIHVLKNIAVPLELVHMASLVHDDV--IDDAELRRGKRTV 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 Q+D A+ GN + A E + D+ R +LS T L M G++ I Sbjct: 107 KSQWDNKVAMYTGNYIFAKAVE-----ASAYFDHPRVHQVLSNT----LVEMCIGEVEQI 157 Query: 168 QDEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ +V++ + K KT L+ +CE GA+ A A ++ L FG N+G+ FQ+ Sbjct: 158 RDQYNWGQNLRVYLRRIKRKTALLIAVSCELGALAADADPVIQKHLYNFGYNVGMSFQIT 217 Query: 225 DDLLD 229 DD+LD Sbjct: 218 DDILD 222 >gi|323342013|ref|ZP_08082246.1| geranyltranstransferase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464438|gb|EFY09631.1| geranyltranstransferase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 279 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 4/189 (2%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 A+ Y+L+ GGK++R L+ F ++ L A+E +H YSL+HDDLP+MD+ + Sbjct: 25 AMTYSLMSGGKRLRPRLLLAMLEDFGCDYKLGLNPACALEMVHTYSLVHDDLPAMDDDDL 84 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RR KPT H + E AI+AG+ LLT AF +S ++ L ++ + + L N G GM+ Sbjct: 85 RRFKPTNHKVFGEGVAILAGDALLTGAFTALS--QSSLDSDVVGKCLEILARNAGNNGMI 142 Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 GQ LDI D + +KTG L A E ++A +K G LG+ Sbjct: 143 LGQELDIDDHIDHIDDLVACYNLKTGCLFAGAFEMAVVIAGKDSYQK-LAHDLGLTLGVA 201 Query: 221 FQLADDLLD 229 FQ DDLL+ Sbjct: 202 FQFQDDLLE 210 >gi|253991517|ref|YP_003042873.1| octaprenyl diphosphate synthase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638395|emb|CAR67017.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase (opp synthetase) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782967|emb|CAQ86132.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase (opp synthetase) [Photorhabdus asymbiotica] Length = 323 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPIIAILAARALGYQSDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++++ +++R ++S N+ +G + Q+++ Sbjct: 101 ATFGNAASVLVGDFIYTRSFQMMTT-----LNSMRVLKLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A S AI+++A+ ++ L+ +G LG FQL DDLL Sbjct: 155 DPNISEDDYMRVIYSKTARLFEVAAHSSAIISNATPEQETALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|138895788|ref|YP_001126241.1| heptaprenyl diphosphate synthase subunit II [Geobacillus thermodenitrificans NG80-2] gi|196248670|ref|ZP_03147370.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. G11MC16] gi|134267301|gb|ABO67496.1| Component II of heptaprenyl diphosphate synthase [Geobacillus thermodenitrificans NG80-2] gi|196211546|gb|EDY06305.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. G11MC16] Length = 320 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + + V A+E IH SL+HDD+ +D+ +RRG+PT+ Sbjct: 43 GGKRIRPVFVLLAARFGHYDLERIKHVAVALELIHMASLVHDDV--IDDADLRRGRPTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A+ G+ L + E ++ D+ R+ +L+ T + + G++ I+ Sbjct: 101 AKWSNRFAMYTGDYLFARSLERMAE-----LDDPRAHQVLAKT----IVEVCRGEIEQIK 151 Query: 169 DEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D++ E T + I++ KT L+ +C+ GA+ A A ++ +RL FG +G+ FQ+ Sbjct: 152 DKYWFEQPLRTYLRRIRR-KTALLIAASCQLGALAAGAPESVAKRLYWFGHYVGMSFQIT 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFTGTEEQLGK 225 >gi|115526409|ref|YP_783320.1| farnesyltranstransferase [Rhodopseudomonas palustris BisA53] gi|115520356|gb|ABJ08340.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisA53] Length = 341 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L +++ AA+E +H +L+HDD+ +D +RRGK + Sbjct: 60 GGKRLRPMLTLAMANLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 117 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 118 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTE 177 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G +A + E+ R FG N+GI FQL DD+L Sbjct: 178 DEYL------AVIRGKTAELFAAACEVGPAIAERPKPEQSACRSFGMNIGIAFQLVDDVL 231 Query: 229 D 229 D Sbjct: 232 D 232 >gi|33591927|ref|NP_879571.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I] gi|33571571|emb|CAE41057.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I] gi|332381344|gb|AEE66191.1| octaprenyl-diphosphate synthase [Bordetella pertussis CS] Length = 321 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 114/229 (49%), Gaps = 15/229 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + ++ K +DT++ D L ++T D ++ A GGK++R +V A Sbjct: 6 LIAPIADDMKAVDTVIRDRLNSDVVLIRTI-GDYIIGA------GGKRMRPAMVLMVARA 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 59 LGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLVGDYLY 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + +FE++ D++R +LS + +G + Q+L++ D + + + + + K Sbjct: 117 SRSFEMMVE-----ADSMRIMQILSQATTVIAEGEVL-QLLNVHDPDVSQERYLQVVRYK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T L A + GA++A AS ++ +G ++G FQL DD+LD D Sbjct: 171 TAKLFEAAAQVGAVLAGASPEQETAAAAYGRHVGTAFQLVDDVLDYSGD 219 >gi|89099139|ref|ZP_01172018.1| HepT [Bacillus sp. NRRL B-14911] gi|89086269|gb|EAR65391.1| HepT [Bacillus sp. NRRL B-14911] Length = 320 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 99/184 (53%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + + +V A+E IH SL+HDD+ +D+ +RRGKPT+ Sbjct: 43 GGKRIRPVFVLLSAKFGSYDISEIKKVAVALELIHMASLVHDDV--IDDAELRRGKPTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D TA+ G+ + + E+++ + I ++ ++ + G++ I+ Sbjct: 101 AKWDNRTAMYTGDYIFAKSLEVMTEIERPEAHEILAKTIVEVCV---------GEIEQIK 151 Query: 169 DE--FIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D+ F + ++++ K KT L+ +C+ GA+ A ++ ++L FG +G+ FQ+ D Sbjct: 152 DKYRFDQNLRDYLLRIKRKTALLIAASCQLGAVAAGVDESIHKKLYKFGYYVGMSFQITD 211 Query: 226 DLLD 229 D+LD Sbjct: 212 DILD 215 >gi|261417952|ref|YP_003251634.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC61] gi|319767236|ref|YP_004132737.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC52] gi|261374409|gb|ACX77152.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC61] gi|317112102|gb|ADU94594.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC52] Length = 320 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 17/194 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + + V A+E IH SL+HDD+ +D+ +RRG+PT+ Sbjct: 43 GGKRIRPVFVLLSARFGHYDFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A+ G+ L + E ++ + + ++ ++ + H G++ I+ Sbjct: 101 ARWSNRFAMYTGDYLFARSLERMAELDSPRAHQVLAKTIVEVCH---------GEIEQIK 151 Query: 169 DEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ D+ ++++ KT L+ +C+ GA+ A A + RL FG +G+ FQ+ D Sbjct: 152 DKYRFDQPLRTYLRRIRRKTALLIAASCQLGALAAGAPEAVANRLYWFGHYVGMSFQITD 211 Query: 226 DLLD---CEEDLPK 236 D+LD EE L K Sbjct: 212 DILDFTGTEEQLGK 225 >gi|269468820|gb|EEZ80424.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster bacterium] Length = 323 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 103/189 (54%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASLF----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R L+ CA N +HL A+ IE IH +L+HDD+ +D RRGK Sbjct: 44 GGKRLRPLLLLLCAKATGYQGNHHHLMAV----VIELIHTATLLHDDI--VDESATRRGK 97 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ L + AFE++ P D++R +LS T N +G + Q+ Sbjct: 98 DTANEVWGNAASVLVGDFLYSRAFEMMVEP-----DSMRIMKILSKTTNSIAEGEVL-QL 151 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 L+ Q+ + E + F + + KT L + + G I+++A + ++ LR +G +LG FQ+ Sbjct: 152 LNCQNSELSEAEYFNVIERKTACLFQASTQIGGILSNADEKQELALRNYGLHLGNAFQII 211 Query: 225 DDLLDCEED 233 DD LD E D Sbjct: 212 DDALDYESD 220 >gi|300024374|ref|YP_003756985.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299526195|gb|ADJ24664.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 342 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L +R +A+E +H +L+HDD+ +D RRG+ T Sbjct: 61 GGKRLRPMLALASAKLCGYGGNGHIRTASAVEFMHTATLLHDDV--VDESATRRGRKTAR 118 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF++ + I S ++ +Q + Sbjct: 119 MIWGNQASVLVGDFLLGQAFKMFVDVGSLPVLRIMSNAAATIAEGEVMQLAAAKNTSTTE 178 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ I KT AL A ESGA + E+ LR +G+NLG+ FQL DD L Sbjct: 179 DDYL------AIINAKTAALFSAAAESGAALTQRPPEEQSALRSYGKNLGLAFQLVDDAL 232 Query: 229 DCEED 233 D D Sbjct: 233 DYAGD 237 >gi|123440796|ref|YP_001004787.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087757|emb|CAL10543.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 323 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALGYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S +++R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTS-----LESLRVLTLMSDATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A+++ A++ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLSDATEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|332160062|ref|YP_004296639.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607378|emb|CBY28876.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp. palearctica Y11] gi|325664292|gb|ADZ40936.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862049|emb|CBX72215.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica W22703] Length = 323 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALGYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S +++R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTS-----LESLRVLTLMSDATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A+++ A++ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLSDATEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|14625008|dbj|BAB61884.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum] Length = 147 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 8/149 (5%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP MD+ +RRG PTVH+++ E TAI+ G+ L +AF ++S I L+ Sbjct: 1 HDDLPCMDDDVLRRGLPTVHVKFGEATAILVGDALQAHAFLTLASLNAPGDSPI--ALVR 58 Query: 149 SLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L + +G GGQ +D+ + ++ ++ + +MK+GAL+ + GA+ A Sbjct: 59 ELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKSGALVRASVRMGALCAVGVNAA 118 Query: 207 KERLRC----FGENLGIIFQLADDLLDCE 231 L C + G+ Q+ DD+LD E Sbjct: 119 HAALYCALDHYSACFGLALQVIDDILDAE 147 >gi|311896831|dbj|BAJ29239.1| putative polyprenyl diphosphate synthase [Kitasatospora setae KM-6054] Length = 362 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 17/217 (7%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75 +DT+ D + L + H+ D SA+ GK IR +V + A+R Sbjct: 48 VDTLPDSMRLISGYHLGWLEADGAPSAVG----AGKSIRPAMVLAATTAVGGRPQDAVRA 103 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134 AA+E +H ++L+HDD+ +D + RR +PT + AI+AG+ + + A +++ P Sbjct: 104 AAAVELVHNFTLLHDDV--IDRDHTRRHRPTAWRVFGTTGAILAGDAMHSLALRVLAEDP 161 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDET--QVFMIQKMKTGALMCF 191 +R +L + + GQ D ++ D T + + + KTGAL+ Sbjct: 162 HPAAAAAVR-RLADCVVE------LCAGQQADCSFEQRTDVTLAECLTMAEGKTGALLGC 214 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 AC GA+ A A + + FG +G+ FQL DDL+ Sbjct: 215 ACALGALYAGADAETADAMDAFGREIGLAFQLIDDLI 251 >gi|288556090|ref|YP_003428025.1| heptaprenyl diphosphate synthase component II [Bacillus pseudofirmus OF4] gi|288547250|gb|ADC51133.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Bacillus pseudofirmus OF4] Length = 323 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A+ F + L+ + +E +H SL+HDD+ +D+ +RRGK TV Sbjct: 43 GGKRIRPVFVL-LAAKFGTYDIHVLKNIAVPLELVHMASLVHDDV--IDDAELRRGKRTV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 Q+D A+ GN + A E + D+ R +LS T L M G++ I Sbjct: 100 KSQWDNKVAMYTGNYIFAKAVE-----ASAYFDHPRVHQVLSNT----LVEMCIGEVEQI 150 Query: 168 QDEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ +V++ + K KT L+ +CE GA+ A A ++ L FG N+G+ FQ+ Sbjct: 151 RDQYNWGQNLRVYLRRIKRKTALLIAVSCELGALAADADPVIQKHLYNFGYNVGMSFQIT 210 Query: 225 DDLLD 229 DD+LD Sbjct: 211 DDILD 215 >gi|167031734|ref|YP_001666965.1| polyprenyl synthetase [Pseudomonas putida GB-1] gi|166858222|gb|ABY96629.1| Polyprenyl synthetase [Pseudomonas putida GB-1] Length = 322 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L Q++ T I +L Q+ ++ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A +A A+ ++E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEEVYMEVIRGKTAMLFEASTHSAAALAEATDEQREALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYKGD 219 >gi|17987815|ref|NP_540449.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] gi|17983542|gb|AAL52713.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] Length = 362 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 81 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 138 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 139 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 192 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 193 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 252 Query: 229 D 229 D Sbjct: 253 D 253 >gi|148545964|ref|YP_001266066.1| polyprenyl synthetase [Pseudomonas putida F1] gi|148510022|gb|ABQ76882.1| Polyprenyl synthetase [Pseudomonas putida F1] Length = 322 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L Q++ T I +L Q+ ++ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A +A A+ ++E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYKGD 219 >gi|22124585|ref|NP_668008.1| octaprenyl diphosphate synthase [Yersinia pestis KIM 10] gi|45440424|ref|NP_991963.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Microtus str. 91001] gi|108806061|ref|YP_649977.1| octaprenyl diphosphate synthase [Yersinia pestis Antiqua] gi|108813417|ref|YP_649184.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516] gi|145600809|ref|YP_001164885.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides F] gi|153997290|ref|ZP_02022390.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125] gi|162421069|ref|YP_001608269.1| octaprenyl diphosphate synthase [Yersinia pestis Angola] gi|165928166|ref|ZP_02223998.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165937469|ref|ZP_02226032.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. IP275] gi|166011293|ref|ZP_02232191.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166214028|ref|ZP_02240063.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401227|ref|ZP_02306727.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420704|ref|ZP_02312457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423704|ref|ZP_02315457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470490|ref|ZP_02335194.1| octaprenyl-diphosphate synthase [Yersinia pestis FV-1] gi|218930527|ref|YP_002348402.1| octaprenyl diphosphate synthase [Yersinia pestis CO92] gi|229839166|ref|ZP_04459325.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896655|ref|ZP_04511822.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A] gi|229899730|ref|ZP_04514871.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229903892|ref|ZP_04519005.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516] gi|270489119|ref|ZP_06206193.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294505357|ref|YP_003569419.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003] gi|21957387|gb|AAM84259.1|AE013669_9 octaprenyl diphosphate synthase [Yersinia pestis KIM 10] gi|45435281|gb|AAS60840.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Microtus str. 91001] gi|108777065|gb|ABG19584.1| octaprenyl-diphosphate synthase [Yersinia pestis Nepal516] gi|108777974|gb|ABG12032.1| octaprenyl-diphosphate synthase [Yersinia pestis Antiqua] gi|115349138|emb|CAL22101.1| octaprenyl-diphosphate synthase [Yersinia pestis CO92] gi|145212505|gb|ABP41912.1| octaprenyl-diphosphate synthase [Yersinia pestis Pestoides F] gi|149288927|gb|EDM39007.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125] gi|162353884|gb|ABX87832.1| octaprenyl-diphosphate synthase [Yersinia pestis Angola] gi|165914574|gb|EDR33188.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. IP275] gi|165919853|gb|EDR37154.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989677|gb|EDR41978.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166204823|gb|EDR49303.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|166961510|gb|EDR57531.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049252|gb|EDR60660.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057874|gb|EDR67620.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679662|gb|EEO75765.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516] gi|229687222|gb|EEO79297.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229695532|gb|EEO85579.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700433|gb|EEO88465.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A] gi|262363422|gb|ACY60143.1| octaprenyl-diphosphate synthase [Yersinia pestis D106004] gi|262367203|gb|ACY63760.1| octaprenyl-diphosphate synthase [Yersinia pestis D182038] gi|270337623|gb|EFA48400.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294355816|gb|ADE66157.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003] gi|320013717|gb|ADV97288.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 323 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMISVLVARALNYQGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLQS-----MRVLTLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S AI++ AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEESYMQVIYSKTARLFEAAAQSAAILSDASEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|253995893|ref|YP_003047957.1| trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8] gi|253982572|gb|ACT47430.1| Trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8] Length = 322 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A LF ++ A +E IH +L+HDD+ +D RRG+ T + Sbjct: 43 GGKRLRPMLVLLAAGLFGEIQTQHHQLAAVVEFIHTATLLHDDV--VDESSKRRGQSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + + AF+++ + + N+R +LS N+ +G + Q+L++ Sbjct: 101 ALFGNAASVLVGDFVYSRAFQMMVAVQ-----NMRVMEVLSNATNVIAEGEVL-QLLNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I + + KT L A GAI++ AS ++ L +G +LG FQL DD+L Sbjct: 155 NADISDKAYLQVIHYKTAKLFEAATRLGAIISEASAKDEAALTAYGMHLGTAFQLIDDIL 214 Query: 229 DC---EEDLPK 236 D ED+ K Sbjct: 215 DLSGNSEDIGK 225 >gi|39934115|ref|NP_946391.1| farnesyltranstransferase [Rhodopseudomonas palustris CGA009] gi|192289642|ref|YP_001990247.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] gi|39647963|emb|CAE26483.1| octaprenyl-diphosphate synthase [Rhodopseudomonas palustris CGA009] gi|192283391|gb|ACE99771.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] Length = 336 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L +++ AA+E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAMANLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSASATIAEGEVMQLAAAKNTATTE 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G +A+ + E+ R FG N+GI FQL DD+L Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPAIANRPKPEQSACRSFGMNIGIAFQLIDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|313497049|gb|ADR58415.1| IspB [Pseudomonas putida BIRD-1] Length = 322 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L Q++ T I +L Q+ ++ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A +A A+ ++E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYKGD 219 >gi|260596184|ref|YP_003208755.1| octaprenyl-diphosphate synthase [Cronobacter turicensis z3032] gi|260215361|emb|CBA27367.1| Octaprenyl-diphosphate synthase [Cronobacter turicensis z3032] Length = 323 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALGYEGKAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + I+ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----IKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQCSGILAGASEAQERALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|26987423|ref|NP_742848.1| polyprenyl synthetase [Pseudomonas putida KT2440] gi|24982082|gb|AAN66312.1|AE016259_10 octylprenyl diphosphate synthase [Pseudomonas putida KT2440] Length = 322 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L Q++ T I +L Q+ ++ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A +A A+ ++E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYKGD 219 >gi|237814874|ref|ZP_04593872.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella abortus str. 2308 A] gi|237789711|gb|EEP63921.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella abortus str. 2308 A] Length = 363 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 82 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 139 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 140 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 193 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 194 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 253 Query: 229 D 229 D Sbjct: 254 D 254 >gi|254701208|ref|ZP_05163036.1| hypothetical protein Bsuib55_10162 [Brucella suis bv. 5 str. 513] Length = 338 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 115 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 169 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|62289388|ref|YP_221181.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str. 9-941] gi|189023639|ref|YP_001934407.1| polyprenyl synthetase [Brucella abortus S19] gi|254693184|ref|ZP_05155012.1| hypothetical protein Babob3T_00652 [Brucella abortus bv. 3 str. Tulya] gi|254696828|ref|ZP_05158656.1| hypothetical protein Babob28_03708 [Brucella abortus bv. 2 str. 86/8/59] gi|254707866|ref|ZP_05169694.1| hypothetical protein BpinM_13091 [Brucella pinnipedialis M163/99/10] gi|254709549|ref|ZP_05171360.1| hypothetical protein BpinB_04602 [Brucella pinnipedialis B2/94] gi|254713033|ref|ZP_05174844.1| hypothetical protein BcetM6_06634 [Brucella ceti M644/93/1] gi|254716613|ref|ZP_05178424.1| hypothetical protein BcetM_09363 [Brucella ceti M13/05/1] gi|256031043|ref|ZP_05444657.1| hypothetical protein BpinM2_10374 [Brucella pinnipedialis M292/94/1] gi|256060537|ref|ZP_05450705.1| hypothetical protein Bneo5_09318 [Brucella neotomae 5K33] gi|256254446|ref|ZP_05459982.1| hypothetical protein BcetB_09183 [Brucella ceti B1/94] gi|256256948|ref|ZP_05462484.1| hypothetical protein Babob9C_06236 [Brucella abortus bv. 9 str. C68] gi|260168175|ref|ZP_05754986.1| polyprenyl synthetase family protein [Brucella sp. F5/99] gi|306839902|ref|ZP_07472700.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. NF 2653] gi|306845036|ref|ZP_07477617.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO1] gi|62195520|gb|AAX73820.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str. 9-941] gi|189019211|gb|ACD71933.1| Polyprenyl synthetase [Brucella abortus S19] gi|306274668|gb|EFM56457.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO1] gi|306405088|gb|EFM61369.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. NF 2653] gi|326408435|gb|ADZ65500.1| Polyprenyl synthetase [Brucella melitensis M28] gi|326538151|gb|ADZ86366.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 338 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 115 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 169 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|297170868|gb|ADI21887.1| geranylgeranyl pyrophosphate synthase [uncultured verrucomicrobium HF0130_25O04] Length = 277 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 10/189 (5%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A R L GGK+IR LV C S L+V A +E +H +L+HDD+ +D+ IR Sbjct: 54 ARRVLLGGGKRIRPLLVYRCGSDSPDVTDDLLKVSAILELVHVATLVHDDV--LDHAKIR 111 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGML 160 R + T+H + E AI+ G+ L ++A E+ + P T++ + + S + + I Sbjct: 112 RSRATIHTEIGEHAAILLGDALFSFALELATEFPTTRICNIVSSATRRTCSGEIMQTFAR 171 Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 G L + D F IQ KTG +C++GA +A S+ + + FG +LG+ Sbjct: 172 GNYDLGLPDYFS------FIQD-KTGEFFKASCQAGAFLAGHSECILDLVGEFGLSLGLN 224 Query: 221 FQLADDLLD 229 +Q+ DDL+D Sbjct: 225 YQIFDDLVD 233 >gi|90425826|ref|YP_534196.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB18] gi|90107840|gb|ABD89877.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB18] Length = 336 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + +++ AA+E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPNLTLAMAQLTGYSGEGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTE 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G +A + E+ R FG NLGI FQL DD+L Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPAIAGRPKAEQSACRSFGMNLGIAFQLVDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|316932581|ref|YP_004107563.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1] gi|315600295|gb|ADU42830.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1] Length = 336 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L +++ AA+E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAMANLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSASATIAEGEVMQLAAAKNTATTE 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G +A+ + E+ R FG N+GI FQL DD+L Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPAIANRPKPEQSACRSFGMNIGIAFQLIDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|317121083|ref|YP_004101086.1| polyprenyl synthetase [Thermaerobacter marianensis DSM 12885] gi|315591063|gb|ADU50359.1| Polyprenyl synthetase [Thermaerobacter marianensis DSM 12885] Length = 331 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A F+ + L V AA+E IH +L+HDD+ +D RRG PTV+ Sbjct: 53 GGKRLRPALLLLTARNFHYDRERLLPVAAAVELIHMATLVHDDI--VDGATSRRGLPTVN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +++ TA++ G+ L AF ++++ DN ++M + + + Q + Sbjct: 111 VRWGTGTAVLTGDFLFARAFSLLAAD----GDNRVVRVMAEAVYEMSTGEI--EQQAQLF 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT + C G +M A + + E LR +G +G+ FQ+ DD+L Sbjct: 165 DPAAGEEGYYRRIYKKTAHFISHCCLMGGLMGGAPERQVEALRRYGYGIGMGFQVIDDIL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|225626910|ref|ZP_03784949.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella ceti str. Cudo] gi|225618567|gb|EEH15610.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella ceti str. Cudo] Length = 363 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 82 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 139 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 140 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 193 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 194 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 253 Query: 229 D 229 D Sbjct: 254 D 254 >gi|62959209|gb|AAY23712.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP840] Length = 145 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 78/134 (58%), Gaps = 2/134 (1%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+PT H YDE AI+AG+ LLT AFE+++ + + +++ L+ G G+ Sbjct: 12 LRRGRPTNHKVYDEAVAILAGDALLTRAFEMVALRSPAVPADRLLKVVGELSLVAGAPGL 71 Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 +GGQ++D++ E +D + I KTGAL+ +GA++ A + LR + + Sbjct: 72 VGGQVVDLECEGKEVDLETLEYIHLHKTGALLSACVITGAMIGGADDALIKALRTYARGI 131 Query: 218 GIIFQLADDLLDCE 231 G+ FQ+ DD+LD E Sbjct: 132 GLAFQIIDDILDVE 145 >gi|163842683|ref|YP_001627087.1| hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445] gi|163673406|gb|ABY37517.1| Hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445] Length = 340 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 59 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230 Query: 229 D 229 D Sbjct: 231 D 231 >gi|261751747|ref|ZP_05995456.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] gi|261741500|gb|EEY29426.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] Length = 340 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 59 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230 Query: 229 D 229 D Sbjct: 231 D 231 >gi|163858538|ref|YP_001632836.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM 12804] gi|163262266|emb|CAP44569.1| putative octaprenyl-diphosphate synthase [Bordetella petrii] Length = 345 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + ++ IE IH +L+HDD+ +D +RRG+ T + Sbjct: 66 GGKRLRPMLVILAGRACGGHGQGLHKLATIIEFIHTSTLLHDDV--VDESSMRRGRSTAN 123 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + A++ G+ L + +F+++ +L Q++ T+ + +L Q+L + Sbjct: 124 AIWGSLPAVLVGDFLYSRSFQLM----VELGSMQIMQIIGKTTNQLAEGEIL--QLLHVH 177 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + +DE + K KT L + +GAI+A A + + R+ FGE+LG FQ+ DD+L Sbjct: 178 NPDVDEAAYMQVIKHKTAVLFAASTTAGAILAGADRELQRRMEVFGEHLGYAFQITDDVL 237 Query: 229 DCEED 233 D D Sbjct: 238 DYTAD 242 >gi|326404029|ref|YP_004284111.1| putative geranylgeranyl pyrophosphate synthase [Acidiphilium multivorum AIU301] gi|325050891|dbj|BAJ81229.1| putative geranylgeranyl pyrophosphate synthase [Acidiphilium multivorum AIU301] Length = 289 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 11/199 (5%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSM 95 +L +A+R+A+ G ++R L AS + A+ GAA+E +HC SL+HDDLP Sbjct: 26 KLAAAMRHAVFPRGARVRPRLCLAVASACGADRFDAAVAAGAALEFLHCASLVHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ RRG+P+VH + A++AG+ L+ AF+ ++ L ++ +++L+ + Sbjct: 86 DDAATRRGRPSVHAAFGAPIAVLAGDALIVLAFQTLA-----LGCAVQPGPVIALSGIVA 140 Query: 156 -LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GM GG + E DE + Q+ KT AL + A ++ + R G Sbjct: 141 EAVGMPGGIVAGQAWESEDEVDLARYQRAKTSALF---AAAAMAGAASAGEDPLPWRALG 197 Query: 215 ENLGIIFQLADDLLDCEED 233 +NLG +Q+ADDL D D Sbjct: 198 DNLGDAYQIADDLCDAAGD 216 >gi|330997298|ref|ZP_08321151.1| putative octaprenyl pyrophosphate synthetase [Paraprevotella xylaniphila YIT 11841] gi|329571093|gb|EGG52800.1| putative octaprenyl pyrophosphate synthetase [Paraprevotella xylaniphila YIT 11841] Length = 323 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 16/201 (7%) Query: 34 QH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 QH N L+ A+R+ L GK +R L A + + + L ++E +H SL+HDD Sbjct: 27 QHQNPLLMIALRHVLSRKGKLMRPILTLLAAKKYGEINDSVLHAAVSLEMLHTASLVHDD 86 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D +RRG+ +V+ D A++ G+ LL+ A + + ++R ++ L Sbjct: 87 V--VDESGVRRGQSSVNALLDNKAAVLVGDYLLSTALK-----HAAMAGDLR---VVDLV 136 Query: 152 HNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 +G Q + G Q+ +++ + I E Q F + + KT +L E GA+++ AS+NE Sbjct: 137 ARLG-QTLSDGELQQLSNVKSDEISENQYFEVIRRKTASLFAVCAEVGALLSGASENEIL 195 Query: 209 RLRCFGENLGIIFQLADDLLD 229 RL FG +GI FQ+ DD+ D Sbjct: 196 RLGEFGTYVGICFQIRDDVFD 216 >gi|190570943|ref|YP_001975301.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019458|ref|ZP_03335264.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357215|emb|CAQ54632.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994880|gb|EEB55522.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 328 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 12/229 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTE 60 L + L ++SK D + DLL + +++ +L + I L+ GGKKIR L+ Sbjct: 2 LNTDLTKSSKLDDIVSSDLLAMNDFIFKNVNDEGTKLATDITSHLINSGGKKIRPKLIFI 61 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + N + + + + A++E IH +L+HDD+ +D R G T + + ++I+ G Sbjct: 62 MCKMLNYSGESRVNIAASVEFIHNATLLHDDV--LDESKARHGVATANKIWGNKSSILVG 119 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + LLT AF + N+ +LS N+ ++G + QM D F I Sbjct: 120 DLLLTLAFRWLIEC-----GNLSVLSILSKASNLLVKGEIK-QMTTRFDPNTIRKNYFNI 173 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L E+ ++++ A+ +E ERLR FG N G+ FQ+ DD+LD Sbjct: 174 IGEKTASLFSACSEAASVVSGATSDETERLRNFGFNFGMAFQIIDDVLD 222 >gi|146339069|ref|YP_001204117.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278] gi|146191875|emb|CAL75880.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278] Length = 336 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L +++ AA+E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAMAHLTEYAGDGHVKLAAAVEFMHTATLLHDDV--VDESEMRRGKLSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTE 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G ++A + E+ R FG NLGI FQL DD+L Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPVLADRPKAEQTASRSFGMNLGIAFQLVDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|295398947|ref|ZP_06808929.1| heptaprenyl diphosphate synthase component II [Geobacillus thermoglucosidasius C56-YS93] gi|312110446|ref|YP_003988762.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y4.1MC1] gi|294978413|gb|EFG54009.1| heptaprenyl diphosphate synthase component II [Geobacillus thermoglucosidasius C56-YS93] gi|311215547|gb|ADP74151.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y4.1MC1] Length = 321 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + V A+E IH SL+HDD+ +D+ +RRG+ T+ Sbjct: 43 GGKRIRPVFVLLAAKFGTYDIERVKHVAVALELIHMASLVHDDV--IDDAELRRGRQTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A+ AG+ + + E+++ + L I + ++ + G++ I+ Sbjct: 101 AKWSNRFAMYAGDYMFARSLELMTRLENPLAHRILANTIVEVCR---------GEIEQIK 151 Query: 169 DEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ D+ ++ K KT L+ +C+ GAI A+A++ +RL FG +G+ FQ+ D Sbjct: 152 DKYRFDQNLRCYLRRIKRKTALLIAASCQLGAIAANAAKRTADRLYLFGYYVGMSFQITD 211 Query: 226 DLLD 229 D+LD Sbjct: 212 DILD 215 >gi|148253842|ref|YP_001238427.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1] gi|146406015|gb|ABQ34521.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1] Length = 336 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L +++ AA+E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAMAHLTGYAGDGHVKLAAAVEFMHTATLLHDDV--VDESEMRRGKLSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTE 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G ++A + E+ R FG NLGI FQL DD+L Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPVLADRPKAEQTASRSFGMNLGIAFQLVDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|170723659|ref|YP_001751347.1| polyprenyl synthetase [Pseudomonas putida W619] gi|169761662|gb|ACA74978.1| Polyprenyl synthetase [Pseudomonas putida W619] Length = 322 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L Q++ T I +L Q+ ++ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A +A A+ ++E LR FG++LG+ FQL DDLL Sbjct: 155 DASTSEEVYMEVIRGKTAMLFEASTHSAAALAGATDEQREALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYKGD 219 >gi|329929813|ref|ZP_08283489.1| putative heptaprenyl diphosphate synthase component II [Paenibacillus sp. HGF5] gi|328935791|gb|EGG32252.1| putative heptaprenyl diphosphate synthase component II [Paenibacillus sp. HGF5] Length = 324 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R V + + V +E IH SL+HDD+ +D+ RRGKPTV Sbjct: 43 GGKRLRPVFVLMGGKFGDYDIDKLKHVAVPLELIHSASLVHDDV--IDDADTRRGKPTVK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D A+ G+ + A ++ + K I ++ M+ ++ G+M I+ Sbjct: 101 AKWDNRIAMYTGDYIYGKALQLTTHLKQPEIHQILAKAMVEMSI---------GEMEQIR 151 Query: 169 DEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D F E V ++++ + KT L+ +C+ GA+ A A + L FG N+G+ FQ+ D Sbjct: 152 DFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGALAADADRKVANSLYRFGYNVGMAFQIQD 211 Query: 226 DLLD 229 DLLD Sbjct: 212 DLLD 215 >gi|251791050|ref|YP_003005771.1| octaprenyl diphosphate synthase [Dickeya zeae Ech1591] gi|247539671|gb|ACT08292.1| Trans-hexaprenyltranstransferase [Dickeya zeae Ech1591] Length = 323 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALSYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLAS-----LRVMSVMSDAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A ++ AI++ AS ++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEDSYMRVIYSKTARLFEAAAQASAILSDASSEQELALQEYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|62185577|ref|YP_220362.1| geranylgeranyl pyrophosphate synthase [Chlamydophila abortus S26/3] gi|62148644|emb|CAH64417.1| geranylgeranyl pyrophosphate synthase [Chlamydophila abortus S26/3] Length = 293 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 101/203 (49%), Gaps = 11/203 (5%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + + YAL GGK+IR LV A + L AIE IH +LI DDLP MD+ Sbjct: 34 APVEYALTSGGKRIRPMLVCMMAKGLGMGR-DVLDSALAIEFIHTSTLIADDLPCMDDDD 92 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--------NIRSQLMLSLT 151 RRG+PTVH +DE +A++A L+ A+ I +LK + ++ +T Sbjct: 93 ERRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLKSLGVDSKEVDCAYDIISDIT 152 Query: 152 -HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 N G+ G+LGGQ D+ V I KTGAL AC SG + + ++ Sbjct: 153 DKNFGVHGVLGGQYEDMFFTNHGPEHVQSIINKKTGALFEIACVSGWLFGGGTPQCVPQV 212 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 F + G++FQ+ DD+LD +D Sbjct: 213 LEFSQTFGLLFQIKDDILDIHQD 235 >gi|226227273|ref|YP_002761379.1| geranyltranstransferase [Gemmatimonas aurantiaca T-27] gi|226090464|dbj|BAH38909.1| geranyltranstransferase [Gemmatimonas aurantiaca T-27] Length = 307 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 109/198 (55%), Gaps = 14/198 (7%) Query: 42 AIRYALLG-GKKIRSFLVTE----CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 A+RYALLG GK++R+ L+ E C + L A +IE +H YSL+HDDLP MD Sbjct: 47 AVRYALLGEGKRLRAILLIEAYRACGGTGDAADLAA-----SIEVVHAYSLVHDDLPCMD 101 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNI 154 + +RRG+PTVH + A AG ++ A +S L D + ++ L Sbjct: 102 DDDMRRGRPTVHKVHGVGVATAAGLAMVPLAARSAWHASKALGLSDVVAGDIVRELMEAS 161 Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM+GGQ+LD++ E + + + ++KTGAL+ + GA A A + + L Sbjct: 162 GGGGMIGGQLLDLEAEGAPLSLESLERVHRLKTGALIRASVTLGARAALAPEARRHALDR 221 Query: 213 FGENLGIIFQLADDLLDC 230 +G ++G+ FQ+ADD+LD Sbjct: 222 YGASIGLAFQIADDVLDV 239 >gi|82699315|ref|YP_413889.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225851937|ref|YP_002732170.1| hypothetical protein BMEA_A0432 [Brucella melitensis ATCC 23457] gi|254688701|ref|ZP_05151955.1| hypothetical protein Babob68_00654 [Brucella abortus bv. 6 str. 870] gi|254718581|ref|ZP_05180392.1| hypothetical protein Bru83_03399 [Brucella sp. 83/13] gi|254729734|ref|ZP_05188312.1| hypothetical protein Babob42_00662 [Brucella abortus bv. 4 str. 292] gi|256044121|ref|ZP_05447028.1| hypothetical protein Bmelb1R_06464 [Brucella melitensis bv. 1 str. Rev.1] gi|256112919|ref|ZP_05453832.1| hypothetical protein Bmelb3E_09565 [Brucella melitensis bv. 3 str. Ether] gi|256159107|ref|ZP_05456928.1| hypothetical protein BcetM4_09356 [Brucella ceti M490/95/1] gi|256368857|ref|YP_003106363.1| polyprenyl synthetase family protein [Brucella microti CCM 4915] gi|260545860|ref|ZP_05821601.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260563478|ref|ZP_05833964.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260754179|ref|ZP_05866527.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260757399|ref|ZP_05869747.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260761223|ref|ZP_05873566.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260883204|ref|ZP_05894818.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|261213426|ref|ZP_05927707.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|261218414|ref|ZP_05932695.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261221617|ref|ZP_05935898.1| polyprenyl synthetase [Brucella ceti B1/94] gi|261315356|ref|ZP_05954553.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261317077|ref|ZP_05956274.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261320737|ref|ZP_05959934.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261324532|ref|ZP_05963729.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261757634|ref|ZP_06001343.1| polyprenyl synthetase [Brucella sp. F5/99] gi|265983557|ref|ZP_06096292.1| polyprenyl synthetase [Brucella sp. 83/13] gi|265988115|ref|ZP_06100672.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|265990531|ref|ZP_06103088.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265994359|ref|ZP_06106916.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|265997580|ref|ZP_06110137.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|265999601|ref|ZP_05467084.2| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|297247801|ref|ZP_06931519.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196] gi|82615416|emb|CAJ10385.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225640302|gb|ACO00216.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|255999015|gb|ACU47414.1| polyprenyl synthetase family protein [Brucella microti CCM 4915] gi|260097267|gb|EEW81142.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260153494|gb|EEW88586.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260667717|gb|EEX54657.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260671655|gb|EEX58476.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260674287|gb|EEX61108.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260872732|gb|EEX79801.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|260915033|gb|EEX81894.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|260920201|gb|EEX86854.1| polyprenyl synthetase [Brucella ceti B1/94] gi|260923503|gb|EEX90071.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261293427|gb|EEX96923.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261296300|gb|EEX99796.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261300512|gb|EEY04009.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261304382|gb|EEY07879.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261737618|gb|EEY25614.1| polyprenyl synthetase [Brucella sp. F5/99] gi|262552048|gb|EEZ08038.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|262765472|gb|EEZ11261.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|263001315|gb|EEZ13890.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263094886|gb|EEZ18624.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|264660312|gb|EEZ30573.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|264662149|gb|EEZ32410.1| polyprenyl synthetase [Brucella sp. 83/13] gi|297174970|gb|EFH34317.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196] Length = 340 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 59 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230 Query: 229 D 229 D Sbjct: 231 D 231 >gi|254513762|ref|ZP_05125823.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium NOR5-3] gi|219676005|gb|EED32370.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium NOR5-3] Length = 290 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 12/222 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSA-IRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 D+ + +L + +LL+A +++A+ GG ++R L A N + Sbjct: 5 DSDFEQVLRSAVAEAADSRCPKLLAAALQHAVFPGGARVRPKLCLAVALANNCDAPALAA 64 Query: 75 VGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A ++E +HC SL+HDD+P DN RRG+ +VH + E A++AG+ L+ AF +++ Sbjct: 65 AAAASVELLHCASLVHDDMPCFDNAGERRGRESVHSAFGEPIALLAGDALIVSAFALLAR 124 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 P+ K+ + SQ++ + +G G+ GQ + + +D V + + KTGAL A Sbjct: 125 PQLPAKNRL-SQVLRVVAEGVGAPCGIAAGQAWE-SEPVVD---VSLYHRSKTGALFIAA 179 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 +GA A R G +G +Q+ADD+ D L Sbjct: 180 TAAGAAAAGVDVGP---WRTLGAKIGEAYQVADDIQDATSTL 218 >gi|261406049|ref|YP_003242290.1| trans-hexaprenyltranstransferase [Paenibacillus sp. Y412MC10] gi|261282512|gb|ACX64483.1| Trans-hexaprenyltranstransferase [Paenibacillus sp. Y412MC10] Length = 324 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R V + + V +E IH SL+HDD+ +D+ RRGKPTV Sbjct: 43 GGKRLRPVFVLMGGKFGDYDIDKLKHVAVPLELIHSASLVHDDV--IDDADTRRGKPTVK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D A+ G+ + A ++ + K I ++ M+ ++ G+M I+ Sbjct: 101 AKWDNRIAMYTGDYIYGKALQLTTHLKQPEIHQILAKAMVEMSI---------GEMEQIR 151 Query: 169 DEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D F E V ++++ + KT L+ +C+ GA+ A A + L FG N+G+ FQ+ D Sbjct: 152 DFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGALAADADRKVANSLYRFGYNVGMAFQIQD 211 Query: 226 DLLD 229 DLLD Sbjct: 212 DLLD 215 >gi|306842306|ref|ZP_07474966.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO2] gi|306287563|gb|EFM59019.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO2] Length = 322 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 41 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + ++ + + +Q M + Sbjct: 99 TIWGNQASVLVGDFLLGQAFKMMVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTE 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 159 DEYL------AVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 212 Query: 229 D 229 D Sbjct: 213 D 213 >gi|224023511|ref|ZP_03641877.1| hypothetical protein BACCOPRO_00213 [Bacteroides coprophilus DSM 18228] gi|224016733|gb|EEF74745.1| hypothetical protein BACCOPRO_00213 [Bacteroides coprophilus DSM 18228] Length = 324 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 18/198 (9%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 +LS IR GK +R LV A LF + + L V ++E +H SL+HDD+ +D Sbjct: 36 VLSYIRKR--NGKMMRPILVMLMAKLFGHINSSTLHVALSLELLHTASLVHDDV--VDES 91 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLL-TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG+ +V+ Y+ +++ G+ +L T + + K +L + L +G Q Sbjct: 92 DERRGQSSVNAVYNNKISVLVGDYMLATSLWHAAHTGKVEL---------VELVARLG-Q 141 Query: 158 GMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + G Q+ +I + E F + + KT AL + ESGA+ A AS+ E R FG Sbjct: 142 ALSEGEIIQLANISNRDFSEDIYFDVIRKKTAALFTASAESGALSAGASEEEVSRAADFG 201 Query: 215 ENLGIIFQLADDLLDCEE 232 E +GI FQ+ DD+ D E Sbjct: 202 EMIGIAFQIKDDIFDYYE 219 >gi|294851781|ref|ZP_06792454.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026] gi|294820370|gb|EFG37369.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026] Length = 340 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 59 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230 Query: 229 D 229 D Sbjct: 231 D 231 >gi|52550277|gb|AAU84126.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon GZfos37B2] Length = 280 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 16/187 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKKIR ++ + LF + + AIE IH SLIHDD+ +D G +RRG P+V+ Sbjct: 38 GGKKIRPIILILSSELFGGDADECVDAALAIELIHSASLIHDDI--LDVGLVRRGVPSVY 95 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 Q+ AI+ G+ L++ + E+IS + ++D R+ + +S G+ LD+ Sbjct: 96 NQFGLAAAILCGDFLISKSIELISKYDRAVIQDFGRAGMSMS-----------EGEALDV 144 Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + E F KT +L + G+ + A R +G +LG+ +Q+ D Sbjct: 145 NSNETNFSENDYFECISKKTASLFAASARMGSRIGGAPARSINRCTEYGTHLGMAYQIID 204 Query: 226 DLLDCEE 232 D+L+C+E Sbjct: 205 DILECKE 211 >gi|330686015|gb|EGG97638.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis VCU121] Length = 319 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 22/212 (10%) Query: 25 LQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIE 80 L+ A H Q D++L + LL GGK++R V + ++ +V A+E Sbjct: 17 LEQAIHSQ----DKVLEEAAFHLLSSGGKRVRPAFVILSSQFGKEEGVSEDTYKVAVALE 72 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH +L+HDD+ +D RRG+ T+ ++D+ TAII GN LL + +S K + Sbjct: 73 LIHMATLVHDDV--IDKSDKRRGRLTISKKWDQTTAIITGNFLLALGLQHLSEIKDKRVH 130 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGA 197 I S+ ++ + G++ QD+F +T ++++ KT L+ A E GA Sbjct: 131 EILSESIVDVCR---------GELFQFQDQFNSQQTMTNYLRRINRKTALLIQLATEVGA 181 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I A + +L+ G +G+ FQ+ DD+LD Sbjct: 182 ITAGSDIKTVRKLKMIGHYIGMSFQIVDDILD 213 >gi|148559082|ref|YP_001258425.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840] gi|148370339|gb|ABQ60318.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840] Length = 328 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 47 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 105 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 159 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|74100798|gb|AAZ99643.1| isoprenyl diphosphate synthase [Streptomyces maritimus] Length = 336 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG P+ + Sbjct: 53 GGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++D A++ G+ L A +I++ + +R Q + + ++ GQ+L Sbjct: 111 TRWDNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ + GA+M+ A + E L +GE LG+ Sbjct: 161 GPQDGRDPVDHYLD------VLSGKTGSLVAVSSRFGAMMSGADETVVEVLTQYGERLGV 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDIASD 228 >gi|297584422|ref|YP_003700202.1| heptaprenyl diphosphate synthase component II [Bacillus selenitireducens MLS10] gi|297142879|gb|ADH99636.1| heptaprenyl diphosphate synthase component II [Bacillus selenitireducens MLS10] Length = 323 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 17/194 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + V +E IH SL+HDD+ +D+ +RRGK T+ Sbjct: 43 GGKRIRPVFVLLSAQFGDYKLDKVKHVAVPLEMIHMGSLVHDDV--IDDAELRRGKKTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D A+ G+ + A EI S I S M+ ++ G++ I+ Sbjct: 101 AEWDNRVAMYTGDYMFAKAIEIASKSGNMKLHEILSDAMVEMSI---------GEVEQIK 151 Query: 169 DEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++F + ++++ + K KT L+ +CE GA++A A + + +L+ +G G+ FQ+ D Sbjct: 152 EQFNPDQHLRIYLRRIKRKTALLISVSCELGALIAGADETTQMKLKRYGYFTGMAFQITD 211 Query: 226 DLLD---CEEDLPK 236 D+LD E++L K Sbjct: 212 DILDFVGTEKELGK 225 >gi|291615993|ref|YP_003518735.1| IspB [Pantoea ananatis LMG 20103] gi|291151023|gb|ADD75607.1| IspB [Pantoea ananatis LMG 20103] gi|327396245|dbj|BAK13667.1| octaprenyl-diphosphate synthase IspB [Pantoea ananatis AJ13355] Length = 323 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLSARAMGYQGDLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTS-----MGSLRILALMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A ++ AI+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|302539319|ref|ZP_07291661.1| predicted protein [Streptomyces sp. C] gi|302448214|gb|EFL20030.1| predicted protein [Streptomyces sp. C] Length = 336 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 17/219 (7%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGA 77 L ++L + + +H L + RYALL GK +R L+ A + L Sbjct: 13 FLAEVLAKEFTRRWPEHAGGLDAVHRYALLPTGKLLRPRLLALSALAVGGSLRAVLPAAV 72 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---- 133 E H SL+HDD+ +D +RRG+P VH ++ AI+AGN L F ++ Sbjct: 73 GFEAAHTGSLLHDDI--IDQDALRRGRPAVHTEFGPQMAIVAGNALFFTWFTTLAECAAH 130 Query: 134 --PKTQLKDNIRSQLMLS--LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 P ++ + +Q + L+ L G + D +++ + + KT AL Sbjct: 131 GIPHQRIVAAMETQAKAGQQICRGAALELTLAGDLEAPPDVYLE------MARAKTAALF 184 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 AC GA++ ++++ L FG++LG FQ+ DDLL Sbjct: 185 DAACTVGAVLGGGTEHQIAALGAFGDHLGCAFQIRDDLL 223 >gi|146329727|ref|YP_001209836.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A] gi|146233197|gb|ABQ14175.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A] Length = 348 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 9/197 (4%) Query: 41 SAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 S +RYAL GK+ R L A + + A A IE IH +L+HDD+ +D+ Sbjct: 60 SVMRYALQAKGKRFRPMLHLLSAGVCDYRGDFAPTAAAFIEFIHNATLLHDDV--VDSSD 117 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 IRRG+ + HI + +I+ G+ L T AF+++ S + + M T+ I + Sbjct: 118 IRRGQASAHIIFSNAASILVGDFLYTRAFQLMVSSG----NAAVLKTMADATNLIAAGEV 173 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + Q+ ++ + IDET + + ++KT L AC+ A +A S+ + L +G+ LG+ Sbjct: 174 M--QLANMHNPDIDETCYYRVIELKTAVLFSAACKIAAQLAGVSEEKIAALADYGKKLGM 231 Query: 220 IFQLADDLLDCEEDLPK 236 FQ+ DD+LD D K Sbjct: 232 AFQMIDDMLDYMGDESK 248 >gi|298694759|gb|ADI97981.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus ED133] Length = 314 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 34 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 90 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 91 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 141 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 142 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 201 Query: 223 LADDLLD 229 + DD+LD Sbjct: 202 IIDDVLD 208 >gi|212709993|ref|ZP_03318121.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM 30120] gi|212687402|gb|EEB46930.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM 30120] Length = 323 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + ++V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAILAGRSLGYSEHKHIQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+A+A+ +++ L+ +G +G FQL DDLL Sbjct: 155 DPDITEESYMQVIYSKTARLFEAASHASAILANATPEQEKALQDYGRYIGTAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|147919413|ref|YP_685765.1| putative farnesyltranstransferase [uncultured methanogenic archaeon RC-I] gi|116077932|emb|CAJ36439.2| putative farnesyltranstransferase [uncultured methanogenic archaeon RC-I] Length = 314 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 15/196 (7%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +RYAL GKKIR+ L+T N A+ A +E IH SL+ DD+ +DN Sbjct: 35 LAEVVRYALCQKGKKIRASLLTIACEAVGGNIAQAMVPAAVVEMIHNTSLVLDDV--IDN 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI---RSQLMLSLTHNI 154 RRG+ T++ ++ A+IA + LL S + + I + MLSL Sbjct: 93 AETRRGRSTINHRWGNNMALIACDALLALTIRQASKSSVNMTNAIIECAANSMLSLAEGE 152 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 L+ L G+ ++D + I + KT +L + E GA++ + E + LR +G Sbjct: 153 ALE--LVGKDYTLKD-------YYKIAERKTASLFSASAEIGALVGGGTSKEVKSLREYG 203 Query: 215 ENLGIIFQLADDLLDC 230 ++GI FQ+ DD+LD Sbjct: 204 TSIGIAFQIRDDILDV 219 >gi|323439529|gb|EGA97250.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus O11] gi|323442232|gb|EGA99863.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus O46] Length = 314 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 34 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 90 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 91 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 141 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 142 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 201 Query: 223 LADDLLD 229 + DD+LD Sbjct: 202 IIDDVLD 208 >gi|260893125|ref|YP_003239222.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4] gi|260865266|gb|ACX52372.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4] Length = 320 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 28/226 (12%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 ++++E +R+ L + A H LL+A GGK++R L CA Sbjct: 13 ARVEEEIRRVVAGAPPPLREAALH--------LLAA------GGKRLRPALALLCAHFGR 58 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + L + AA+E IH +L+HDD+ +D +RRG PTVH ++ TAI G+ L Sbjct: 59 YSLERVLPLAAAVELIHMATLVHDDV--IDGAEMRRGIPTVHARWGPETAIKVGDVLFAQ 116 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKM 183 A E++SS +D+ ++ + + + M G+ ++ + + V F + Sbjct: 117 AIELVSS----YEDSAVARKLAATCLS-----MCTGEFAQERESYSPQQSVWRYFRRIRR 167 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT + ACE GA + A + LR +G LG+ FQ+ DD+LD Sbjct: 168 KTALFIGAACELGARVCEAPLVVCQALRQYGLALGMAFQVVDDVLD 213 >gi|21328588|gb|AAM48595.1| geranylgeranyl pyrophosphate synthetase [uncultured marine proteobacterium] gi|40062988|gb|AAR37858.1| geranylgeranyl pyrophosphate synthetase [uncultured marine bacterium 443] Length = 292 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 11/210 (5%) Query: 28 ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCY 85 A H Q L A+ YA+ GG ++R + A N + + A +AIE +HC Sbjct: 17 AEHATAQCPPLLAQALNYAVFPGGARVRPKICKAVALANNSSDVGLANAAASAIELLHCA 76 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SL+HDDLP D+ RRGKP+VH ++ E A++ G+ L+ AF+ +++ R Sbjct: 77 SLVHDDLPCFDDATQRRGKPSVHAKFGERIAVLTGDALIVAAFQTLATHAIHAVRTERVP 136 Query: 146 LMLSL-THNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ ++ +G G+ GQ + + +D ++ + KTGAL A +GA A Sbjct: 137 LVTAIVARGVGAPHGICAGQAWECE-RSVDLSR---YHRAKTGALFVAATCAGAAAAGVD 192 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233 L G ++G +Q+ADD+ D D Sbjct: 193 PGPWVNL---GASIGEAYQVADDIKDAISD 219 >gi|84515006|ref|ZP_01002369.1| Geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis SKA53] gi|84511165|gb|EAQ07619.1| Geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis SKA53] Length = 293 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 18/212 (8%) Query: 27 TASHMQTQHN---DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL--RVGAAIE 80 TA+ Q Q +L +A+ YA+ GG +IR ++ A + + AL AA+E Sbjct: 12 TAAIAQGQGGVAPPKLAAALNYAVTPGGARIRPTILMSVA-MACGDDRPALTNAAAAALE 70 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +HC SL+HDDLP D+ +RRGKP +H + E A++AG+ L+ F +++ + Sbjct: 71 LVHCASLVHDDLPCFDDADMRRGKPALHRAFSEPLAVLAGDSLIIMGFHLLA--RAAGDA 128 Query: 141 NIRSQLMLS-LTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 R+ +L L G+ G+ GQ + + + + + KTGAL A + GA+ Sbjct: 129 PARAITLLDILGTRTGMPFGICAGQGWESESQI----DLSAYHQAKTGALFIAATQMGAV 184 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A+ E E G +G FQ+ADDL D Sbjct: 185 ---AAGQEAEPWAELGARIGEAFQVADDLRDA 213 >gi|104780055|ref|YP_606553.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48] gi|95109042|emb|CAK13738.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48] Length = 322 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L Q++ T I +L Q+ ++ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A +A AS ++E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEEIYMDVIRGKTAMLFEASTHSAAALAGASDEQREALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYKGD 219 >gi|283470681|emb|CAQ49892.1| heptaprenyl diphosphate synthase component II (hepppsynthase subunit 2) (spore germination protein c3) [Staphylococcus aureus subsp. aureus ST398] gi|302333080|gb|ADL23273.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 319 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 39 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 96 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206 Query: 223 LADDLLD 229 + DD+LD Sbjct: 207 IIDDVLD 213 >gi|49483657|ref|YP_040881.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MRSA252] gi|257425534|ref|ZP_05601959.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 55/2053] gi|257428193|ref|ZP_05604591.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 65-1322] gi|257430823|ref|ZP_05607205.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 68-397] gi|257433581|ref|ZP_05609939.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus E1410] gi|257436423|ref|ZP_05612470.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus M876] gi|282904051|ref|ZP_06311939.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus C160] gi|282905816|ref|ZP_06313671.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908786|ref|ZP_06316604.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911047|ref|ZP_06318849.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus WBG10049] gi|282914259|ref|ZP_06322046.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus M899] gi|282924366|ref|ZP_06332040.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus C101] gi|283958233|ref|ZP_06375684.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus A017934/97] gi|293501285|ref|ZP_06667136.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus 58-424] gi|293510246|ref|ZP_06668954.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus M809] gi|293526841|ref|ZP_06671525.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus M1015] gi|49241786|emb|CAG40477.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MRSA252] gi|257271991|gb|EEV04129.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 55/2053] gi|257275034|gb|EEV06521.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 65-1322] gi|257278951|gb|EEV09570.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 68-397] gi|257281674|gb|EEV11811.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus E1410] gi|257284705|gb|EEV14825.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus M876] gi|282313753|gb|EFB44146.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus C101] gi|282322327|gb|EFB52651.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus M899] gi|282324742|gb|EFB55052.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus WBG10049] gi|282327050|gb|EFB57345.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331108|gb|EFB60622.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595669|gb|EFC00633.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus C160] gi|283790382|gb|EFC29199.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus A017934/97] gi|290920399|gb|EFD97463.1| heptaprenyl diphosphate synthase, component II [Staphylococcus aureus subsp. aureus M1015] gi|291096290|gb|EFE26551.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus 58-424] gi|291467190|gb|EFF09708.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus M809] Length = 319 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 39 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 96 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206 Query: 223 LADDLLD 229 + DD+LD Sbjct: 207 IIDDVLD 213 >gi|82751067|ref|YP_416808.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus RF122] gi|82656598|emb|CAI81021.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus RF122] Length = 319 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 39 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 96 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206 Query: 223 LADDLLD 229 + DD+LD Sbjct: 207 IIDDVLD 213 >gi|327311326|ref|YP_004338223.1| polyprenyl synthetase [Thermoproteus uzoniensis 768-20] gi|326947805|gb|AEA12911.1| polyprenyl synthetase [Thermoproteus uzoniensis 768-20] Length = 347 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 109/245 (44%), Gaps = 36/245 (14%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 ++ RI+ L LL+ A+ D A+ Y + GGK++R L A + N Sbjct: 22 EKYGPRIEEALAKYLLRDAA-------DDFKDAVLYQISTGGKRLRPILTLAVAEAVSGN 74 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + AL A +E IH YSLI+DD+ +D G +RR KPT + + AI+ G Sbjct: 75 YERALPAAAIVELIHNYSLIYDDI--IDRGEVRRNKPTTRAAFGDYAAILIGIWYREAIE 132 Query: 129 E-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK----- 182 E ++ +PK S+ + I + + G+ LDI E + ++ Sbjct: 133 EAVLDTPKP-------SEFAREVAKVI--KAIDEGERLDILFELAGRDDPYFVKARWPSV 183 Query: 183 ----------MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTGAL+ A + GA+ + + FG N GI FQ+ DD+LD Sbjct: 184 KLDDYIRMVGLKTGALIAAAAKWGAMSVADDRQLADAAWDFGMNAGIAFQIVDDVLDIFG 243 Query: 233 DLPKK 237 D PKK Sbjct: 244 D-PKK 247 >gi|284006654|emb|CBA71916.1| octaprenyl-diphosphate synthase [Arsenophonus nasoniae] Length = 323 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKKIR + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKKIRPMIAILVGRALGYEGKKHINVAALIEFIHTATLLHDDV--VDESTLRRGKKTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L D++ ++S N+ +G + Q+++ Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMM----TEL-DSMPILKLMSDATNVIAEGEVS-QLINCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E+ I KT L A + AI++ A++ +++ LR +G LG FQL DDLL Sbjct: 155 NPDITESTYMQIIYSKTARLFEAATHASAIVSGANETQQQALRDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|282919182|ref|ZP_06326917.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus C427] gi|282316992|gb|EFB47366.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus C427] Length = 319 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 39 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 96 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206 Query: 223 LADDLLD 229 + DD+LD Sbjct: 207 IIDDVLD 213 >gi|329731320|gb|EGG67686.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 21193] Length = 319 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 39 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 96 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206 Query: 223 LADDLLD 229 + DD+LD Sbjct: 207 IIDDVLD 213 >gi|74100794|gb|AAZ99641.1| isoprenyl diphosphate synthase [Streptomyces lividans TK24] Length = 336 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GG++ R LV A + + +E H +L HDD+ MD +RRG P+ + Sbjct: 53 GGERFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++D A++ G+ L A +I++ + +R Q + + ++ GQ+L Sbjct: 111 TRWDNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ +C GA+M+ A + + L +GE LG+ Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGV 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDIASD 228 >gi|23501305|ref|NP_697432.1| polyprenyl synthetase family protein [Brucella suis 1330] gi|161618375|ref|YP_001592262.1| hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365] gi|254703754|ref|ZP_05165582.1| hypothetical protein Bsuib36_07492 [Brucella suis bv. 3 str. 686] gi|260566991|ref|ZP_05837461.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261754401|ref|ZP_05998110.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] gi|23347194|gb|AAN29347.1| polyprenyl synthetase family protein [Brucella suis 1330] gi|161335186|gb|ABX61491.1| Hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365] gi|260156509|gb|EEW91589.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261744154|gb|EEY32080.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] Length = 340 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 59 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + ++ + + +Q M + Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGSFDALDVLATSASIIAEGEVMQLAAAKNMETTE 176 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 177 DEYL------AVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230 Query: 229 D 229 D Sbjct: 231 D 231 >gi|327400034|ref|YP_004340873.1| Farnesyltranstransferase [Archaeoglobus veneficus SNP6] gi|327315542|gb|AEA46158.1| Farnesyltranstransferase [Archaeoglobus veneficus SNP6] Length = 303 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 17/185 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R +V L + V A+E IH SL HDD+ +D G +RR T+H Sbjct: 39 GGKRTRPIIVLLSGRLCGGEWSEVMNVALAVELIHTASLAHDDV--IDRGVVRRNVETLH 96 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 ++YD AI+ G+ L++ + E++S + ++D R +M M G+++D Sbjct: 97 VKYDTSLAILVGDWLISKSVELVSVYNEEVIRDFARVGMM-----------MAEGEIMDI 145 Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 I++ E F KT +L ++ ++ + + E L +G NLGI +QL Sbjct: 146 DSIKNGGFGEEDYFKCIAAKTASLFAYSAKNACRIVSDDKKAAEYLFNYGNNLGIAYQLV 205 Query: 225 DDLLD 229 DDLL+ Sbjct: 206 DDLLE 210 >gi|86748213|ref|YP_484709.1| farnesyltranstransferase [Rhodopseudomonas palustris HaA2] gi|86571241|gb|ABD05798.1| Farnesyltranstransferase [Rhodopseudomonas palustris HaA2] Length = 336 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L +++ AA+E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAMANLTGYAGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTE 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G +A + E+ R FG N+GI FQL DD+L Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPAIADRPKAEQSACRSFGMNIGIAFQLVDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|29893480|gb|AAO93113.1| geranylgeranyl pyrophosphate synthetase [Rubrivivax gelatinosus] Length = 310 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 108/201 (53%), Gaps = 15/201 (7%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +L +AIR+A+ GG +IR L A + + + A +AIE IHC SL+HDDLP Sbjct: 26 KLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPALADAAASAIELIHCASLVHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ RRG+P+VH Y E A++AG+ L+ AF+ + + + + + + ++ ++ +G Sbjct: 86 DDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQTLGAAGGRHPERM-AHVLQTVARGVG 144 Query: 156 LQ-GMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQ + E +V + Q+ KTGAL A + A AS + E R Sbjct: 145 TPLGIIAGQAWEC------EPRVALSDYQRAKTGALFAAATAA---GAQASGGDGETWRA 195 Query: 213 FGENLGIIFQLADDLLDCEED 233 G+ LG +Q+ADD+ D D Sbjct: 196 LGDWLGEAYQVADDVRDALAD 216 >gi|238756420|ref|ZP_04617729.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473] gi|238705350|gb|EEP97758.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473] Length = 323 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + +++ A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALDYQGNKHIKIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTSLES-----LRVLQLMSEATNVIAEGEVM-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S +I+A AS ++ + +G LG FQL DDLL Sbjct: 155 NPDITEDSYMRVIYSKTARLFEAASQSSSILADASPEQEMAFQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|297591052|ref|ZP_06949690.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus MN8] gi|297575938|gb|EFH94654.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus MN8] Length = 332 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 52 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 108 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 109 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 159 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 160 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 219 Query: 223 LADDLLD 229 + DD+LD Sbjct: 220 IIDDVLD 226 >gi|315195366|gb|EFU25753.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus CGS00] Length = 319 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 39 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 96 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206 Query: 223 LADDLLD 229 + DD+LD Sbjct: 207 IIDDVLD 213 >gi|239636857|ref|ZP_04677856.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus warneri L37603] gi|239597531|gb|EEQ80029.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus warneri L37603] Length = 319 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 22/212 (10%) Query: 25 LQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIE 80 L+ A H Q D++L + LL GGK++R V + ++ +V A+E Sbjct: 17 LEQAIHSQ----DKVLEEAAFHLLSSGGKRVRPAFVILSSQFGKEEGVSEDTYKVAVALE 72 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH +L+HDD+ +D RRG+ T+ ++D+ TAII GN LL + +S K + Sbjct: 73 LIHMATLVHDDV--IDKSDKRRGRLTISKKWDQTTAIITGNFLLALGLQHLSEIKDKRVH 130 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGA 197 I S+ ++ + G++ QD+F +T ++++ KT L+ A E GA Sbjct: 131 EILSESIVDVCR---------GELFQFQDQFNSQQTMTNYLRRINRKTALLIQLATEVGA 181 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I A + +L+ G +G+ FQ+ DD+LD Sbjct: 182 ITAGSDIKTIHKLKMIGHYIGMSFQIVDDILD 213 >gi|328464568|gb|EGF35937.1| polyprenyl synthetase [Lactobacillus helveticus MTCC 5463] Length = 257 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L+ A + + + + ++IE +H +LIHDD ++D+ +RRG ++ Sbjct: 5 GGKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHDD--TIDDSDLRRGNISIQ 62 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166 ++ + A+ AG+ L T F+++ T+ + +R+ +S L G LG + + Sbjct: 63 AEFGKDVAVYAGDLLFTNFFDLMLDTTTEHEYLVRNAQTMSHI----LNGELGQMAERFN 118 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++ F D K KT AL A E GA A + + L FGENLGI FQ+ DD Sbjct: 119 LEQTFTDYLNDI---KGKTAALFRLAAEEGAHFAGGNAEQSTALANFGENLGIAFQIVDD 175 Query: 227 LLD 229 LLD Sbjct: 176 LLD 178 >gi|87310419|ref|ZP_01092549.1| polyprenyl synthase [Blastopirellula marina DSM 3645] gi|87286918|gb|EAQ78822.1| polyprenyl synthase [Blastopirellula marina DSM 3645] Length = 309 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 98/189 (51%), Gaps = 16/189 (8%) Query: 47 LLGGKKIRSFLVTE----CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 +LGGK++R L+ C + + ++ +GA IE IH +L+HDD+ +D RR Sbjct: 28 MLGGKRMRPALLLLAAKACGQVTDAHYT----LGAVIEMIHTATLVHDDV--LDEADQRR 81 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 TV+ +++ T+++ G+ L ++AF + + T + M+ + NI +G L Sbjct: 82 HLATVNSRWNNETSVLLGDFLFSHAFYLATMLPTTC-----AARMIGRSTNIVCEGELR- 135 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q+ Q E + I KT L ACE GA A AS+ + L FG +LGI FQ Sbjct: 136 QIASRQAFETTEEEYLAIIDAKTAELCACACELGARYAEASEEQIAALEKFGRDLGIAFQ 195 Query: 223 LADDLLDCE 231 +ADDLLD E Sbjct: 196 IADDLLDVE 204 >gi|302554703|ref|ZP_07307045.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] gi|302472321|gb|EFL35414.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] Length = 344 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 17/219 (7%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL--TALRVGAAI 79 D L + SH+ H + R GK +R L CA +A+ V A+ Sbjct: 30 DALPEEISHIVGYHIGWWDANGRPCEQKGKYVRPTLAVACARAIGGEAAVKSAIPVAVAV 89 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H +SL+HDD+ MD G +RR +PT + A++AG+ L+ A+ +++S Sbjct: 90 ELVHDFSLLHDDV--MDEGTVRRHRPTAWSLFGTSKAVLAGDLLVAEAYRLLASSGCDDP 147 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACE 194 + + +++ H++ + GQ +D+ F D +V + + KT AL+ ACE Sbjct: 148 ERL-VKILAQAVHDLCV-----GQAMDLA--FEDRVEVTLAETNAMVSGKTSALIAAACE 199 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GA+ A A + FG +LG++FQL DD+L D Sbjct: 200 LGALTAGADAEAAAVMCAFGGHLGMLFQLVDDILGVWGD 238 >gi|239831276|ref|ZP_04679605.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] gi|239823543|gb|EEQ95111.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] Length = 356 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ A+E +H +L+HDD+ +D +RRGK T Sbjct: 75 GGKRLRPMMTLAAARMFGYEGDGHVRLATAVEFMHTATLLHDDV--VDESDLRRGKSTAR 132 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+++ + ++ + + +Q M + Sbjct: 133 MIWGNQASVLVGDFLLGQAFKMMVDVGSLDALDVLATSASVIAEGEVMQLAAAKNMETTE 192 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + K KT AL A E G I+A A ++ LR +G NLG+ FQL DD L Sbjct: 193 DEYL------AVIKAKTAALFSAAGEVGPIIAGARPADRVALRDYGLNLGLAFQLVDDAL 246 Query: 229 D 229 D Sbjct: 247 D 247 >gi|295427978|ref|ZP_06820610.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus EMRSA16] gi|295128336|gb|EFG57970.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus EMRSA16] Length = 322 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 42 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 98 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 99 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 149 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 150 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 209 Query: 223 LADDLLD 229 + DD+LD Sbjct: 210 IIDDVLD 216 >gi|253732112|ref|ZP_04866277.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724159|gb|EES92888.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 332 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 52 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 108 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 109 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 159 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 160 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 219 Query: 223 LADDLLD 229 + DD+LD Sbjct: 220 IIDDVLD 226 >gi|312438127|gb|ADQ77198.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus TCH60] Length = 332 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 52 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 108 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 109 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 159 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 160 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 219 Query: 223 LADDLLD 229 + DD+LD Sbjct: 220 IIDDVLD 226 >gi|87160661|ref|YP_494056.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195203|ref|YP_500004.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus NCTC 8325] gi|269203095|ref|YP_003282364.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus ED98] gi|87126635|gb|ABD21149.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202761|gb|ABD30571.1| heptaprenyl diphosphate syntase component II, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|262075385|gb|ACY11358.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus ED98] gi|302751300|gb|ADL65477.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 314 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 34 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 90 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 91 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 141 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 142 QFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 201 Query: 223 LADDLLD 229 + DD+LD Sbjct: 202 IIDDVLD 208 >gi|21283088|ref|NP_646176.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus MW2] gi|49486309|ref|YP_043530.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MSSA476] gi|21204528|dbj|BAB95224.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus MW2] gi|49244752|emb|CAG43188.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MSSA476] Length = 319 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 39 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 96 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206 Query: 223 LADDLLD 229 + DD+LD Sbjct: 207 IIDDVLD 213 >gi|238793005|ref|ZP_04636634.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909] gi|238727605|gb|EEQ19130.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909] Length = 323 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALHYEGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLES-----LRVLTLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A++A A++ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLADATETQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|261406506|ref|YP_003242747.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10] gi|261282969|gb|ACX64940.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10] Length = 794 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 99/202 (49%), Gaps = 17/202 (8%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L+ A Y+L G GK++R L A + + + + ++E +H SLI DDLPS D Sbjct: 534 LIDAANYSLEGDGKRLRPILTWVMAVKEYGLQATAIVPLLRSLEYMHTASLIFDDLPSQD 593 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-----PKTQLKDNIRSQLMLSLT 151 N RRG+PT+H +D TA I G L+ A E SS PKT LK L+ + Sbjct: 594 NASTRRGRPTLHQVHDSATAEITGLFLIQKAIEEQSSLEGFDPKTVLK------LIRYSS 647 Query: 152 HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G M GQ +D+ + + + Q+ + KTG + AI+A + E Sbjct: 648 QRAG--DMCSGQAMDLNSKGKALSLEQLNTVCYYKTGIAFEASLVMPAILAQVKETEIAI 705 Query: 210 LRCFGENLGIIFQLADDLLDCE 231 L+ F + GI FQ+ DDLLD + Sbjct: 706 LKKFAYHAGIAFQIQDDLLDVQ 727 >gi|7416783|dbj|BAA94032.1| phytoene synthase [Rubrivivax gelatinosus] Length = 310 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 108/201 (53%), Gaps = 15/201 (7%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +L +AIR+A+ GG +IR L A + + + A +AIE IHC SL+HDDLP Sbjct: 26 KLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPALADAAASAIELIHCASLVHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ RRG+P+VH Y E A++AG+ L+ AF+ + + + + + + ++ ++ +G Sbjct: 86 DDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQTLGAAGGRHPERM-AHVLQTVARGVG 144 Query: 156 LQ-GMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ GQ + E +V + Q+ KTGAL A + A AS + E R Sbjct: 145 TPLGIIAGQAWEC------EPRVALSDYQRAKTGALFAAATAA---GAQASGGDGETWRA 195 Query: 213 FGENLGIIFQLADDLLDCEED 233 G+ LG +Q+ADD+ D D Sbjct: 196 LGDWLGEAYQVADDVRDALAD 216 >gi|15924460|ref|NP_371994.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus Mu50] gi|15927051|ref|NP_374584.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus N315] gi|57650425|ref|YP_186354.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus COL] gi|148267954|ref|YP_001246897.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150394018|ref|YP_001316693.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156979789|ref|YP_001442048.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus Mu3] gi|161509637|ref|YP_001575296.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140963|ref|ZP_03565456.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315977|ref|ZP_04839190.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006256|ref|ZP_05144857.2| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795475|ref|ZP_05644454.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9781] gi|258413283|ref|ZP_05681559.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9763] gi|258420610|ref|ZP_05683552.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9719] gi|258426805|ref|ZP_05688025.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9299] gi|258444803|ref|ZP_05693132.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A8115] gi|258447363|ref|ZP_05695507.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A6300] gi|258449752|ref|ZP_05697853.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A6224] gi|258451128|ref|ZP_05699163.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A5948] gi|258454578|ref|ZP_05702542.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A5937] gi|282892966|ref|ZP_06301201.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus A8117] gi|282921716|ref|ZP_06329433.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9765] gi|282927997|ref|ZP_06335606.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A10102] gi|284024468|ref|ZP_06378866.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 132] gi|296275333|ref|ZP_06857840.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MR1] gi|13701269|dbj|BAB42563.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus N315] gi|14247241|dbj|BAB57632.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus Mu50] gi|57284611|gb|AAW36705.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus COL] gi|147741023|gb|ABQ49321.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149946470|gb|ABR52406.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156721924|dbj|BAF78341.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus subsp. aureus Mu3] gi|160368446|gb|ABX29417.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257789447|gb|EEV27787.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9781] gi|257839847|gb|EEV64315.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9763] gi|257843558|gb|EEV67965.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9719] gi|257849966|gb|EEV73924.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9299] gi|257850296|gb|EEV74249.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A8115] gi|257853554|gb|EEV76513.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A6300] gi|257857000|gb|EEV79900.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A6224] gi|257861183|gb|EEV83996.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A5948] gi|257862961|gb|EEV85725.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A5937] gi|269940961|emb|CBI49345.1| putative heptaprenyl diphosphate synthasecomponent II [Staphylococcus aureus subsp. aureus TW20] gi|282590294|gb|EFB95374.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A10102] gi|282593978|gb|EFB98967.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9765] gi|282764963|gb|EFC05088.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus A8117] gi|285817150|gb|ADC37637.1| Heptaprenyl diphosphate synthase component II [Staphylococcus aureus 04-02981] gi|312829860|emb|CBX34702.1| heptaprenyl diphosphate synthase component 2 (HEPPPsynthase subunit 2) (Spore germination protein C3) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129185|gb|EFT85180.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus CGS03] gi|315197784|gb|EFU28118.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus CGS01] gi|329314146|gb|AEB88559.1| Heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus T0131] gi|329723204|gb|EGG59735.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 21189] gi|329727672|gb|EGG64128.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus 21172] Length = 319 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 39 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 96 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206 Query: 223 LADDLLD 229 + DD+LD Sbjct: 207 IIDDVLD 213 >gi|297207871|ref|ZP_06924304.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911956|ref|ZP_07129399.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus TCH70] gi|296887445|gb|EFH26345.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886202|gb|EFK81404.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus TCH70] Length = 332 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 52 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 108 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 109 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 159 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 160 QFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 219 Query: 223 LADDLLD 229 + DD+LD Sbjct: 220 IIDDVLD 226 >gi|163732321|ref|ZP_02139767.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149] gi|161394619|gb|EDQ18942.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149] Length = 333 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 9/204 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + + A +E IH +L+H Sbjct: 33 MASKHAPRIPEVTAHLVDAGGKRLRPMLTLATAHLCGYDGPFHINLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L + +F+++ + +I + + Sbjct: 93 DDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRVLDILANASAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + Q L +E + + KT AL A E G ++A A ++ Sbjct: 151 IAEGEVLQ-LTASQNLATTEEIY-----LQVVRGKTAALFSAATEVGGVIAGAPDDQVAA 204 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L +G+ LG+ FQ+ DDLLD + D Sbjct: 205 LFEYGDALGVAFQIVDDLLDFQGD 228 >gi|91975694|ref|YP_568353.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB5] gi|91682150|gb|ABE38452.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB5] Length = 336 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L +++ AA+E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPILTLAMANLTGYAGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTE 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G +A + E+ R FG N+GI FQL DD+L Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPTIADRPKAEQSACRSFGMNIGIAFQLVDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|332881619|ref|ZP_08449267.1| putative octaprenyl pyrophosphate synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680258|gb|EGJ53207.1| putative octaprenyl pyrophosphate synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 323 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 106/201 (52%), Gaps = 16/201 (7%) Query: 34 QH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 QH N L+ A+R+ L GK +R L A + + + L ++E +H SL+HDD Sbjct: 27 QHQNPLLMIALRHVLSRKGKLMRPILTLLAAKKYGEINDSVLHAAVSLEMLHTASLVHDD 86 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D +RRG+ +V+ D A++ G+ LL+ A + + ++R ++ L Sbjct: 87 V--VDESGVRRGQSSVNALLDNKAAVLVGDYLLSTALK-----HAAMAGDLR---VVDLV 136 Query: 152 HNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 +G Q + G Q+ +++ + I E Q F + + KT +L E GA+++ AS++E Sbjct: 137 ARLG-QTLSDGELQQLSNVKSDEISENQYFNVIRRKTASLFAVCAEVGALLSGASEDEIR 195 Query: 209 RLRCFGENLGIIFQLADDLLD 229 RL FG +GI FQ+ DD+ D Sbjct: 196 RLGEFGTYVGICFQIRDDVFD 216 >gi|282916736|ref|ZP_06324494.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus D139] gi|283770541|ref|ZP_06343433.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus H19] gi|282319223|gb|EFB49575.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus D139] gi|283460688|gb|EFC07778.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus H19] Length = 319 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 39 GGKRVRPAFVI-LSSQFGKDKQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 96 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206 Query: 223 LADDLLD 229 + DD+LD Sbjct: 207 IIDDVLD 213 >gi|151221591|ref|YP_001332413.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus str. Newman] gi|294848433|ref|ZP_06789179.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9754] gi|295407219|ref|ZP_06817019.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8819] gi|297244643|ref|ZP_06928526.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8796] gi|150374391|dbj|BAF67651.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus str. Newman] gi|294824459|gb|EFG40882.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9754] gi|294967932|gb|EFG43961.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8819] gi|297178673|gb|EFH37919.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8796] Length = 322 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 42 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 98 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 99 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 149 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 150 QFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 209 Query: 223 LADDLLD 229 + DD+LD Sbjct: 210 IIDDVLD 216 >gi|319651348|ref|ZP_08005477.1| HepT protein [Bacillus sp. 2_A_57_CT2] gi|317396879|gb|EFV77588.1| HepT protein [Bacillus sp. 2_A_57_CT2] Length = 320 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + V ++E IH SL+HDD+ +D+ +RRG+PT+ Sbjct: 43 GGKRIRPVFVLLAAKFGEYDIDKIKNVAVSLELIHMASLVHDDV--IDDAELRRGQPTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D A+ G+ + A E+I++ K I S ++ L G++ I+ Sbjct: 101 AKWDNKIAMYTGDYIFARALELITNIKNPHAHKILSHTLVELCI---------GEIEQIK 151 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ + + F K KT L+ +C+ G I A+ ++ ++L FG +G+ +Q+ D Sbjct: 152 DKYNYDQNIRTYFRRIKRKTAMLIAVSCQLGGIAANVEEDIHKKLFKFGYFVGMSYQIID 211 Query: 226 DLLD 229 D+LD Sbjct: 212 DVLD 215 >gi|114771291|ref|ZP_01448711.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha proteobacterium HTCC2255] gi|114548216|gb|EAU51103.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha proteobacterium HTCC2255] Length = 329 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + + A +E IH +L+HDD+ +D RRG+PT + Sbjct: 48 GGKRLRPLLTLAAAEMCGNTSPYHIHLAATVEFIHTATLLHDDV--VDESKQRRGRPTAN 105 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +D ++++ G+ L + +F+++ +I + ++ LQ + + + Sbjct: 106 LLWDNQSSVLVGDYLFSRSFQLMVETGNLRVLDILANASATIAEGEVLQLTVAQNLSTTE 165 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D ++ + + KT AL AC+ G ++++A + + L +G+ LG+ FQ+ DDLL Sbjct: 166 DTYL------KVIRGKTAALFGAACKVGGVISNAEEKIIDALASYGDALGVCFQITDDLL 219 Query: 229 D 229 D Sbjct: 220 D 220 >gi|255624003|ref|XP_002540427.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223495850|gb|EEF21956.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 263 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 9/159 (5%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE IH +L+HDD+ +D +RRG+ T + ++ +++ G+ L + AF+++ +L Sbjct: 45 IEFIHTATLLHDDV--VDISSLRRGRATANAKWGNAPSVLVGDFLYSRAFQLL----VEL 98 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 LM T+ I +L Q+ D DE F + + KT L A E AI Sbjct: 99 GSMPLMSLMADTTNTIAEGEVL--QLTKAGDPATDEEAYFSVIESKTAVLFAAATEGAAI 156 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 ++ AS + R R +G NLG FQLADD+LD D P+K Sbjct: 157 LSGASTEDAARWRRYGLNLGNAFQLADDVLDYLGD-PEK 194 >gi|253733283|ref|ZP_04867448.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus TCH130] gi|304380947|ref|ZP_07363606.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|253728823|gb|EES97552.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp. aureus TCH130] gi|304340533|gb|EFM06468.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320140359|gb|EFW32215.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MRSA131] gi|320142714|gb|EFW34517.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus aureus subsp. aureus MRSA177] Length = 332 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 52 GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 108 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 109 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 159 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 160 QFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 219 Query: 223 LADDLLD 229 + DD+LD Sbjct: 220 IIDDVLD 226 >gi|156935711|ref|YP_001439627.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894] gi|156533965|gb|ABU78791.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894] Length = 323 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALGYEGKAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQCSGILAGASEAQERALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|144898411|emb|CAM75275.1| Polyprenyl synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 346 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + +++ A +E IH +L+HDD+ +D +RRG+ + + Sbjct: 65 GGKRLRPVLTLASAKLAGHSGERHVKLAACVEFIHTATLLHDDV--VDESELRRGQASAN 122 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + +FE++ ++D L +LS ++ +G + Q++ Sbjct: 123 ALFGNKPSVLVGDFLFSRSFELM------VEDGSLPVLAILSRASSVIAEGEVL-QLITA 175 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E + + KT AL AC GAI+A + E++ L +G NLGI FQL DD+ Sbjct: 176 NDTDTSEDSYLEVIRSKTAALFAAACRIGAIVADRPKAEEDALDSYGLNLGIAFQLIDDV 235 Query: 228 LD 229 LD Sbjct: 236 LD 237 >gi|320536661|ref|ZP_08036676.1| polyprenyl synthetase [Treponema phagedenis F0421] gi|320146483|gb|EFW38084.1| polyprenyl synthetase [Treponema phagedenis F0421] Length = 399 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 90/187 (48%), Gaps = 15/187 (8%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK+ R + A L + A + IE IH SLIHDD+ D+ RRG P Sbjct: 112 LRGGKRWRPLVAVLSAELACGDAYRAYALTPVIEFIHTASLIHDDIE--DSAETRRGAPA 169 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL--THNIGLQGMLGGQM 164 +HIQY TAI A + L +A II++ + S+L LSL T N L + GQ Sbjct: 170 IHIQYGTDTAINAASWLYFHAMSIINAYPSS------SELKLSLYRTVNKNLTNLHLGQA 223 Query: 165 LDI----QDEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 +DI FI +M +KTG+L A E G + A + E+ E++GI Sbjct: 224 MDIDWHRNSNFIPSRAEYMAMIALKTGSLARLAAEIGFLAGGAGEEATEQYGKTMESIGI 283 Query: 220 IFQLADD 226 FQ+ DD Sbjct: 284 GFQILDD 290 >gi|260912975|ref|ZP_05919460.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325] gi|260632965|gb|EEX51131.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325] Length = 358 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 10/200 (5%) Query: 32 QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 Q N L++ + Y ++ GGK+IR + A + IE IH +L+H Sbjct: 59 QLNSNVALINQLGYYIIQSGGKRIRPMIAILAARALGYTSDEPITCATFIEFIHTATLLH 118 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D +RRG PT + ++ +++ G+ + T AF+++ TQL +++R ++S Sbjct: 119 DDV--VDESELRRGNPTANAEFGNAASVLVGDFIYTRAFQLM----TQL-NSLRILKVMS 171 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 N+ +G + Q++++ D E + KT L A AI+A A+ +++ Sbjct: 172 DATNVIAEGEVQ-QLMNVNDPNTTEENYMQVIYGKTARLFEAATHCSAILAKATAAQEKA 230 Query: 210 LRCFGENLGIIFQLADDLLD 229 L+ +G LG FQL DD+LD Sbjct: 231 LQDYGRYLGTAFQLVDDILD 250 >gi|258422499|ref|ZP_05685407.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9635] gi|257847256|gb|EEV71262.1| heptaprenyl diphosphate synthase component II [Staphylococcus aureus A9635] Length = 319 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R V +S F + T+ +V A+E IH +L+HDD+ +D RRGK Sbjct: 39 GGKRVRPAFVI-LSSQFGKDDQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++D+ TAI+ GN LL E + + +KDN QL+ + + + G++ Sbjct: 96 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD+F +T + ++++ KT L+ + E GAI + + + +L+ G +G+ FQ Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206 Query: 223 LADDLLD 229 + DD+LD Sbjct: 207 IIDDVLD 213 >gi|110680572|ref|YP_683579.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114] gi|109456688|gb|ABG32893.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114] Length = 333 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 9/204 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A L + + + A +E IH +L+H Sbjct: 33 MASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYDGPFHINLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L + +F+++ + +I + + Sbjct: 93 DDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRVLDILANASAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + Q L +E + + KT AL A E G ++A A + Sbjct: 151 IAEGEVLQ-LTASQNLATTEEVY-----LQVVRGKTAALFSAATEVGGVIAGAPDDHVAA 204 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L +G+ LGI FQ+ DDLLD + D Sbjct: 205 LFEYGDALGIAFQIVDDLLDFQGD 228 >gi|268324511|emb|CBH38099.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured archaeon] Length = 343 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 21/233 (9%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MNG + QE + + + +++ Q MQ N+ + A+ Y GGK++R L Sbjct: 1 MNG---QQFQEEVQYFNCRMGEVIEQ---KMQRCSNEIIHDALSYIRDTGGKRLRPILCL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A+ AIE +H SL+HDD+ +D+ Y+RR P+ Y E AI+ Sbjct: 55 LSAEAVGGSREKAMTTAIAIELLHNASLVHDDI--IDDNYVRRKSPSNPAMYGEKKAIVI 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177 G+ L + E+++ K + + + L+ S +I + G+ L+ + ET Q Sbjct: 113 GDFLFGISCEMLA--KCGVPEVV--GLVSSAVSDIAM-----GEYLEFSLRTLQETTEQS 163 Query: 178 FM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +M + +KT + + E+GA++ S+ E R +G+N+GI FQ+ DD+LD Sbjct: 164 YMEVATLKTASTFMASAEAGAMLGGGSEAEIANFRNYGKNVGIAFQIQDDILD 216 >gi|320101826|ref|YP_004177417.1| polyprenyl synthetase [Isosphaera pallida ATCC 43644] gi|319749108|gb|ADV60868.1| Polyprenyl synthetase [Isosphaera pallida ATCC 43644] Length = 346 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 12/182 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALR--VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GK++R LV C V LT + A +E IH +L+HDD+ +D +RR T+ Sbjct: 68 GKRLRPALVLLCGQ--AVGRLTPDHPVLAAVVEMIHTATLVHDDI--LDESLVRRHAATI 123 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ TA++ G+ L T+AF + +S ++ L + N+ +G + Q+ Sbjct: 124 NAEWGNETAVLLGDYLFTHAFHLAASLESTLACR-----WIGRATNLVCEGEMN-QVHHR 177 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D +DE+ I + KT L+ +C+ GA A A ERL FG +LG FQ+ADD+ Sbjct: 178 GDLDLDESTYLDIIQGKTAELIAVSCKLGAHYAGADVETTERLERFGRDLGSAFQIADDV 237 Query: 228 LD 229 LD Sbjct: 238 LD 239 >gi|37528362|ref|NP_931707.1| octaprenyl diphosphate synthase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787800|emb|CAE16915.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 323 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPIIAILASRVLGYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++++ +++R ++S N+ +G + Q+++ Sbjct: 101 AMFGNAASVLVGDFIYTRSFQMMTA-----LNSMRVLKLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A S AI+++A+ ++ L+ +G LG FQL DDLL Sbjct: 155 DPNISEDDYMRVIYSKTARLFEVAAHSSAILSNATPEQEMALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|315658247|ref|ZP_07911119.1| heptaprenyl diphosphate synthase [Staphylococcus lugdunensis M23590] gi|315496576|gb|EFU84899.1| heptaprenyl diphosphate synthase [Staphylococcus lugdunensis M23590] Length = 335 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 117/223 (52%), Gaps = 28/223 (12%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT 71 K+++ +L+ ++ + ND +L LL GGK++R V +S F + + Sbjct: 28 KKVNNLLEQII---------KSNDTVLEEASLHLLSSGGKRVRPAFVI-LSSQFGKSKQS 77 Query: 72 --ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +V A+E IH +L+HDD+ +D RRG+ T+ ++D+ TAI+ GN LL E Sbjct: 78 EDTYKVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQTTAILTGNFLLALGLE 135 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTG 186 +S ++ R ++S + + + G++ QD+F ++T ++++ KT Sbjct: 136 QLSEV-----NHPRIHTIISTS----IVDVCRGELFQFQDQFNSNQTISNYLRRINRKTA 186 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ A E GA+ ++ASQ +L+ G +G+ FQ+ DD+LD Sbjct: 187 LLIQLATEVGALTSNASQQTVYKLKMIGHYIGMSFQIIDDILD 229 >gi|323136700|ref|ZP_08071781.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242] gi|322398017|gb|EFY00538.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242] Length = 336 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + L+ A IE +H +L+HDD+ +D +RRGK Sbjct: 55 GGKRLRPMLVLATAGMCGYKGDGHLKFAAGIEFMHTATLLHDDV--VDESNMRRGKIAAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 + + T ++ G+ LL +AF+++ P + SQ + G++L + Sbjct: 113 MLWGNQTCVLVGDFLLGHAFKMMVEPGMVPPLTVVSQAAAVIAE---------GEILQLN 163 Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D E + + KT L A E G ++A+ + ++ R +G NLGI FQL D Sbjct: 164 AAKDTTTTEDAYMAVIRRKTAELFAAAAEVGVMLANKPKADEAAARSYGMNLGIAFQLID 223 Query: 226 DLLD 229 D LD Sbjct: 224 DALD 227 >gi|329926952|ref|ZP_08281352.1| polyprenyl synthetase [Paenibacillus sp. HGF5] gi|328938782|gb|EGG35158.1| polyprenyl synthetase [Paenibacillus sp. HGF5] Length = 809 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 17/204 (8%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L+ A Y+L G GK++R L A + + + + ++E +H SLI DDLPS Sbjct: 547 ESLIDAANYSLEGDGKRLRPILTWVMAVKEYGLQASAIVPLLRSLEYMHTASLIFDDLPS 606 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-----PKTQLKDNIRSQLMLS 149 DN RRG+PT+H +D TA I G L+ A E SS PKT LK L+ Sbjct: 607 QDNASTRRGRPTLHQVHDSATAEITGLFLIQKAIEEQSSLEGFDPKTVLK------LIRY 660 Query: 150 LTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 + G M GQ +D+ + + + Q+ + KTG + AI+A + E Sbjct: 661 SSQRAG--DMCSGQAMDLNSKGKALSLEQLNTVCYYKTGIAFEASLVMPAILAQVKETEI 718 Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231 L+ F + GI FQ+ DDLLD + Sbjct: 719 AILKKFAYHAGIAFQIQDDLLDVQ 742 >gi|255693279|ref|ZP_05416954.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565] gi|260620958|gb|EEX43829.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565] Length = 324 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK +R LV A L++V + L ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 44 NGKMMRPILVLLVARLYDVVRPSTLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++ A++ G+ LL A ++ + +T +S L++ L +G Q + G++L Sbjct: 102 AIFNNKVAVLTGDYLL--ATSLVHAEQT------KSHLIIRLVSLLG-QDLADGELLQLS 152 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ + E+ F + + KT AL ++ A+ A++ E E R GE +GI FQ+ D Sbjct: 153 NVSNHSFSESVYFDVIRKKTAALFAACTKAAALSVDANEEEAEFARLLGEYIGICFQIKD 212 Query: 226 DLLD 229 D+ D Sbjct: 213 DIFD 216 >gi|294507897|ref|YP_003571955.1| polyprenyl synthetase [Salinibacter ruber M8] gi|294344225|emb|CBH25003.1| polyprenyl synthetase [Salinibacter ruber M8] Length = 343 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 14/192 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ + L GGK++R L+ A + + AL A+E H ++L+HDDL MD Sbjct: 48 LYDAVEHVLRAGGKRVRPVLLLLVAQSYGTSVDRALPAALAVEVFHNFTLVHDDL--MDE 105 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG TVH +++ TAI+AG+ ++ +++++ + ++ + ++ H + ++ Sbjct: 106 DDERRGGATVHAKWNPGTAILAGDLMMGLSYDLLGQ-----VEGTDAEALYAVYHPM-VE 159 Query: 158 GMLGGQMLDIQDEFID----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ LD E D E + MI + KTGAL+ A E G+++ A E++RL Sbjct: 160 RLCAGQALDASFETDDAVTVEAYLDMIDR-KTGALLSAAFELGSVIGGAPSPERDRLGTA 218 Query: 214 GENLGIIFQLAD 225 G +G FQ+ D Sbjct: 219 GRLVGRAFQIQD 230 >gi|167465350|ref|ZP_02330439.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Paenibacillus larvae subsp. larvae BRL-230010] Length = 253 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 16/193 (8%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 +++ Y GGK+IR V + + + +E IH SL+HDD+ +D+ Sbjct: 35 ASLLYLKAGGKRIRPVFVLLAGEFGHYDLERMKHIAVPLELIHMASLVHDDV--IDDAET 92 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGK TV ++D A+ G+ + A +++ K I S+ M+ ++ Sbjct: 93 RRGKATVRSKWDNRIAMYTGDYVYAKALTLVTELKNPAIHQIMSKAMIEMSI-------- 144 Query: 161 GGQMLDIQDEFIDETQVFMIQ----KMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 G+M I+ F + Q K KT L+ +C+ GA+ A AS+N +RL FG Sbjct: 145 -GEMEQIR-LFFEHGQTLRDYLRRIKRKTALLIAVSCQLGAMTAEASENYAKRLFHFGYY 202 Query: 217 LGIIFQLADDLLD 229 +G+ FQ+ DD+LD Sbjct: 203 VGMAFQIRDDILD 215 >gi|88604119|ref|YP_504297.1| farnesyltranstransferase [Methanospirillum hungatei JF-1] gi|88189581|gb|ABD42578.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Methanospirillum hungatei JF-1] Length = 320 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 29/235 (12%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + L++ + ++++L D + + N L + GGK++R L A Sbjct: 3 LETYLKKTADEVNSLLQDCYGDPKTALSRAANHLLFA-------GGKRLRPALFKLAADA 55 Query: 65 FNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 ++ G A+E H ++LIHDD+ MD RRG+ TVH + E AI+AG+ L Sbjct: 56 VTPGASQKIMQAGLALEVTHNFTLIHDDI--MDKDVYRRGQKTVHTLWGEPAAILAGDVL 113 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---------QDEFIDE 174 AF +I + + +R+ +L+ T + + GQ D+ +DE++D Sbjct: 114 YARAFFLICNAEAPEGAKVRAISLLART----CEEICEGQQQDMSFEEREDVTRDEYLD- 168 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 MI K KTG L A G+++A S+ + + L +G +G FQ+ DDL+D Sbjct: 169 ----MITK-KTGVLYGAAAAIGSLLAGGSEAQVDALYTYGCKIGAAFQIQDDLID 218 >gi|325955525|ref|YP_004239185.1| trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922] gi|323438143|gb|ADX68607.1| Trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922] Length = 325 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 16/201 (7%) Query: 34 QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 + N LL I Y ++ GK++R V A + + R + IE IH +L+HDD Sbjct: 28 KSNVSLLDRITYYIVRRKGKQMRPMFVFLIAKMLGEVNEKTYRAASFIELIHTATLVHDD 87 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D+ ++RRG +++ + A++ G+ L+ IIS TQ KD L T Sbjct: 88 V--VDDSHMRRGFFSLNALWKNKIAVLVGDYFLSKTL-IIS---TQNKD-----FDLLET 136 Query: 152 HNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 ++ ++ + G++L I+ I E F I +MKT L+ C++GA+ + E Sbjct: 137 VSVAIKEISEGELLQIEKARKLDITEEVYFEIIRMKTATLIAACCKAGALSVSSDNMVAE 196 Query: 209 RLRCFGENLGIIFQLADDLLD 229 RL FGE +GI FQ+ DDL D Sbjct: 197 RLHKFGELVGIAFQIKDDLFD 217 >gi|322381820|ref|ZP_08055774.1| heptaprenyl diphosphate synthase component II-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154208|gb|EFX46530.1| heptaprenyl diphosphate synthase component II-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 324 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 16/193 (8%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 +++ Y GGK+IR V + + + +E IH SL+HDD+ +D+ Sbjct: 35 ASLLYLKAGGKRIRPVFVLLAGEFGHYDLERMKHIAVPLELIHMASLVHDDV--IDDAET 92 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGK TV ++D A+ G+ + A +++ K I S+ M+ ++ Sbjct: 93 RRGKATVRSKWDNRIAMYTGDYVYAKALTLVTELKNPAIHQIMSKAMIEMSI-------- 144 Query: 161 GGQMLDIQDEFIDETQVFMIQ----KMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 G+M I+ F + Q K KT L+ +C+ GA+ A AS+N +RL FG Sbjct: 145 -GEMEQIR-LFFEHGQTLRDYLRRIKRKTALLIAVSCQLGAMTAEASENYAKRLFHFGYY 202 Query: 217 LGIIFQLADDLLD 229 +G+ FQ+ DD+LD Sbjct: 203 VGMAFQIRDDILD 215 >gi|70732635|ref|YP_262398.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5] gi|68346934|gb|AAY94540.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5] Length = 322 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ + I SQ + LQ + ++ Sbjct: 101 AMWGNAPSVLVGDFLYSRSFEMMVELGSMPVMRILSQATRIIAEGEVLQ------LSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A +A A++ + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALAGATEEQAEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|83816814|ref|YP_445986.1| polyprenyl synthetase [Salinibacter ruber DSM 13855] gi|83758208|gb|ABC46321.1| polyprenyl synthetase [Salinibacter ruber DSM 13855] Length = 342 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 14/192 (7%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+ + L GGK++R L+ A + + AL A+E H ++L+HDDL MD Sbjct: 47 LYDAVEHVLRAGGKRVRPVLLLLVAQSYGTSVDRALPAALAVEVFHNFTLVHDDL--MDE 104 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG TVH +++ TAI+AG+ ++ +++++ + ++ + ++ H + ++ Sbjct: 105 DDERRGGATVHAKWNPGTAILAGDLMMGLSYDLLGQ-----VEGTDAEALYAVYHPM-VE 158 Query: 158 GMLGGQMLDIQDEFID----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + GQ LD E D E + MI + KTGAL+ A E G+++ A E++RL Sbjct: 159 RLCAGQALDASFETDDAVTVEAYLDMIDR-KTGALLSAAFELGSVIGGAPSPERDRLGTA 217 Query: 214 GENLGIIFQLAD 225 G +G FQ+ D Sbjct: 218 GRLVGRAFQIQD 229 >gi|239980128|ref|ZP_04702652.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291451984|ref|ZP_06591374.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291354933|gb|EFE81835.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 336 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + + + G +E H +L HDD+ MD +RRG P+ + Sbjct: 53 GGKRLRPLLVMLAAQFGDPDAPGIVPSGVVVELTHLATLYHDDV--MDEAEVRRGVPSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++D A++ G+ L A I++ + +R Q + ++ GQ++ Sbjct: 111 ARWDNSVAVLTGDFLFARASHILADLGPE---AVRVQAE-------AFERLVTGQIMETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ A GA+M+ A + + L +GE LG+ Sbjct: 161 GPRDGRDPVDHYLD------VLGGKTGSLIAVAGRFGAMMSGADERVVDILTQYGERLGV 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDIASD 228 >gi|260905104|ref|ZP_05913426.1| farnesyl pyrophosphate synthetase [Brevibacterium linens BL2] Length = 336 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 19/186 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R L+ A L N + A+E IH SL HDD+ MD+ +RRG P H Sbjct: 54 GGKRARPNLLLLTARLGEANRDAIIDAAVAVELIHLASLYHDDV--MDDAPVRRGAPAAH 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + AI+ G+ L + A + + P+ +R Q + ++ GQ+ + Sbjct: 112 EVWGNSVAILTGDLLFSKASGVTAKLGPEA-----VRVQAET-------FERLVLGQLNE 159 Query: 167 IQDEFIDETQV-FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D + IQ + KTG+L+ + + G + + A Q+ E +R FGE +GI FQL Sbjct: 160 FAGPPEDADAIEHYIQVLADKTGSLIATSAQFGVMFSQADQSLAEPVRIFGERVGIAFQL 219 Query: 224 ADDLLD 229 ADD++D Sbjct: 220 ADDIID 225 >gi|313472484|ref|ZP_07812976.1| polyprenyl synthetase family protein [Lactobacillus jensenii 1153] gi|313449165|gb|EEQ68919.2| polyprenyl synthetase family protein [Lactobacillus jensenii 1153] Length = 319 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 103/219 (47%), Gaps = 25/219 (11%) Query: 32 QTQH--NDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 QT H N L SA++ A GGK +R LV A + +++ AIE +H +LI Sbjct: 20 QTMHAPNKNLESALKEMADNGGKYLRPSLVLLAAHAVGKTNKQIIQIATAIETLHMATLI 79 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D+ RRGKP++ + + A+ AG+ L T F+++ + +Q M Sbjct: 80 HDDV--IDDSDKRRGKPSIQFAFGKDVAVYAGDLLFTNFFDLMLDVNEPEYLRLNAQTMR 137 Query: 149 SLTHNIGLQGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + L G LG Q +++ F D K KT L A E GA A + + Sbjct: 138 QI-----LNGELGQMNQRFNLEQTFDDYLADI---KGKTATLFRLAAEEGAHFAGGNLEQ 189 Query: 207 KERLRCFGENLGIIFQLADDLLDCE----------EDLP 235 + L F E+LGI FQ+ DD+LD EDLP Sbjct: 190 TQILANFAEDLGIAFQIIDDILDYRGSSQLNKPMLEDLP 228 >gi|212704854|ref|ZP_03312982.1| hypothetical protein DESPIG_02921 [Desulfovibrio piger ATCC 29098] gi|212671696|gb|EEB32179.1| hypothetical protein DESPIG_02921 [Desulfovibrio piger ATCC 29098] Length = 321 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + + +E +H +L+HDD+ +DN RRGKP H Sbjct: 41 GGKRLRPLLTILMARLLGYDKKDIYDLAVTMEMLHAATLLHDDV--LDNADTRRGKPAAH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ + I+AG+ +L +A +++ Q D L L + G++L+I Sbjct: 99 TIFNATSTILAGDAMLAHANALVA----QCGDP-----RLCLCFSEATSRTAAGEILEIA 149 Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + ET +++ KT L+ +C+ GA+ A A + E +GEN+G+ FQ+ D Sbjct: 150 AQHQVETTAEEYEEIIRGKTAWLIRASCQLGALRAGADEALVEAAAAYGENIGMAFQIVD 209 Query: 226 DLLD 229 D LD Sbjct: 210 DALD 213 >gi|282879099|ref|ZP_06287859.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310] gi|281298833|gb|EFA91242.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310] Length = 325 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 14/186 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R L+ A FN A +E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKRMRPMLILLIAKNFNGVTSIAQHAAVGLELLHTASLVHDDV--VDESGERRGQASVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166 YD A++ G+ +L+ A +S S+ ++ N+G + + G++L + Sbjct: 103 TYDNKVAVLVGDYILSTALLQVSFT--------HSEAIIQNLANLG-RTLSNGEILQLSN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 IQ++ I E + + K KT AL GA A+ E E R FG+ LGIIFQ+ DD Sbjct: 154 IQNQDISEEVYYQVIKQKTAALFESCAVIGAQAGKATPEEVEAAREFGQTLGIIFQIRDD 213 Query: 227 LLDCEE 232 + D E Sbjct: 214 IFDYFE 219 >gi|238855305|ref|ZP_04645623.1| polyprenyl synthetase [Lactobacillus jensenii 269-3] gi|260664293|ref|ZP_05865146.1| heptaprenyl diphosphate synthase component II [Lactobacillus jensenii SJ-7A-US] gi|282933031|ref|ZP_06338422.1| polyprenyl synthetase [Lactobacillus jensenii 208-1] gi|238832075|gb|EEQ24394.1| polyprenyl synthetase [Lactobacillus jensenii 269-3] gi|260562179|gb|EEX28148.1| heptaprenyl diphosphate synthase component II [Lactobacillus jensenii SJ-7A-US] gi|281302840|gb|EFA95051.1| polyprenyl synthetase [Lactobacillus jensenii 208-1] Length = 325 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 103/219 (47%), Gaps = 25/219 (11%) Query: 32 QTQH--NDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 QT H N L SA++ A GGK +R LV A + +++ AIE +H +LI Sbjct: 26 QTMHAPNKNLESALKEMADNGGKYLRPSLVLLAAHAVGKTNKQIIQIATAIETLHMATLI 85 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D+ RRGKP++ + + A+ AG+ L T F+++ + +Q M Sbjct: 86 HDDV--IDDSDKRRGKPSIQFAFGKDVAVYAGDLLFTNFFDLMLDVNEPEYLRLNAQTMR 143 Query: 149 SLTHNIGLQGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + L G LG Q +++ F D K KT L A E GA A + + Sbjct: 144 QI-----LNGELGQMNQRFNLEQTFDDYLADI---KGKTATLFRLAAEEGAHFAGGNLEQ 195 Query: 207 KERLRCFGENLGIIFQLADDLLDCE----------EDLP 235 + L F E+LGI FQ+ DD+LD EDLP Sbjct: 196 TQILANFAEDLGIAFQIIDDILDYRGSSQLNKPMLEDLP 234 >gi|113460390|ref|YP_718452.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT] gi|112822433|gb|ABI24522.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT] Length = 326 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + A +E IH +L+HDD+ +D +RRG PT + Sbjct: 46 GGKRIRPMIALLAARALNYQGDEPITCAAFVEFIHTATLLHDDV--VDESDMRRGNPTAN 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF+++ T+L +++R ++S NI +G + Q++++ Sbjct: 104 AEFGNAASVLVGDFIYTRAFQLM----TKL-NSLRILQIMSDATNIIAEGEVQ-QLMNVN 157 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI A ++ ++ L+ +G LG FQL DD+L Sbjct: 158 DPETSEDNYMKVIYSKTARLFEVATQCAAITAQSNAEQEIALQHYGRYLGTAFQLVDDVL 217 Query: 229 D 229 D Sbjct: 218 D 218 >gi|254456546|ref|ZP_05069975.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter sp. HTCC7211] gi|207083548|gb|EDZ60974.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter sp. HTCC7211] Length = 337 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 17/192 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R+ L A L + + + + A +E IH +L+HDD+ +D G IRRGK T+ Sbjct: 55 GGKRLRALLTLGSAKLCGYSKGSRDVNLAACVELIHGATLMHDDV--IDEGIIRRGKETL 112 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + ++++ G+ LL+ FE++ N+ +LS T + QG ++L + Sbjct: 113 NEIWGNHSSVLIGDYLLSRCFEMMVED-----GNLEVLKLLSSTSSKIAQG----EVLQL 163 Query: 168 QD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 Q + ++ET + +I KT L + + GAI++ EK+ L +G NLG+ FQ+ Sbjct: 164 QHKGEVDMLEETYLKIIS-AKTAELFAASTKVGAILSDVDNKEKDALEFYGRNLGLTFQI 222 Query: 224 ADDLLDCEEDLP 235 ADD LD +L Sbjct: 223 ADDTLDYNSELK 234 >gi|170717395|ref|YP_001783470.1| polyprenyl synthetase [Haemophilus somnus 2336] gi|168825524|gb|ACA30895.1| Polyprenyl synthetase [Haemophilus somnus 2336] Length = 330 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + A +E IH +L+HDD+ +D +RRG PT + Sbjct: 50 GGKRIRPMIALLAARALNYQGDEPITCAAFVEFIHTATLLHDDV--VDESDMRRGNPTAN 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF+++ T+L +++R ++S NI +G + Q++++ Sbjct: 108 AEFGNAASVLVGDFIYTRAFQLM----TKL-NSLRILQIMSDATNIIAEGEVQ-QLMNVN 161 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI A ++ ++ L+ +G LG FQL DD+L Sbjct: 162 DPETSEDNYMKVIYSKTARLFEVATQCAAITAQSNAEQEIALQHYGRYLGTAFQLVDDVL 221 Query: 229 D 229 D Sbjct: 222 D 222 >gi|163858994|ref|YP_001633292.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM 12804] gi|163262722|emb|CAP45025.1| putative octaprenyl-diphosphate synthase [Bordetella petrii] Length = 308 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 30 GGKRMRPAMVLMMARALGYQGEHHRLLAAVVEFIHTATLLHDDV--VDESDLRRGRETAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ + +R +LS I +G + Q+L++ Sbjct: 88 AMFGNAASVLVGDYLYSRSFEMMVEAGS-----MRIMQILSEATTIIAEGEVL-QLLNVH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + + KT L A + GA++A AS ++E +G ++G FQL DD+L Sbjct: 142 DPDVSQARYLQVVRYKTAKLFEAAAQVGAVLAGASPEQEEAAAAYGRHIGTAFQLVDDVL 201 Query: 229 DCEED 233 D D Sbjct: 202 DYSGD 206 >gi|218290932|ref|ZP_03494989.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218239097|gb|EED06300.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 321 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR C +V AA+E IH +L+HDD+ +D +RRG+PTV Sbjct: 43 GGKRIRPLFALICGLGEREWSEDVAKVAAALEMIHMATLVHDDV--IDRADLRRGRPTVR 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y + A+ G+ L A ++++ DN+ +++ G+ + G++ IQ Sbjct: 101 KSYGNLAAMYTGDYLFARAIQLLAEV-----DNLEVHRLMAR----GIVLLCEGEIEQIQ 151 Query: 169 DEFIDETQVFMIQ----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D F + +Q M KT L+ +C+ GA++ A + E L FG +G+ FQ+ Sbjct: 152 D-FYNWSQGVMTYLRRIHRKTALLISLSCQLGAMVGGAHKREVAALARFGHAVGMAFQIV 210 Query: 225 DDLLD 229 DDLLD Sbjct: 211 DDLLD 215 >gi|58696807|ref|ZP_00372336.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Drosophila simulans] gi|225630516|ref|YP_002727307.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi] gi|58536990|gb|EAL60142.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Drosophila simulans] gi|225592497|gb|ACN95516.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi] Length = 325 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKKIR LV + N + + V A++E IH +L+HDD+ +D R G T + Sbjct: 47 GGKKIRPKLVFIICKMLNYSGENRINVAASVEFIHNATLLHDDV--LDESEARHGVKTAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++I+ G+ LLT AF + N+ +LS ++ ++G + QM Sbjct: 105 KIWGNKSSILVGDLLLTLAFRWLIEC-----GNLNILSILSKASHLLVKGEIK-QMTARF 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D F I KT +L CE+ + ++ A+ +E ERL+ FG N G+ FQ+ DD+L Sbjct: 159 DPHTVRENYFDIIGEKTASLFSACCEAASTVSGATNDETERLKNFGFNFGMAFQIVDDML 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|294496102|ref|YP_003542595.1| polyprenyl synthetase [Methanohalophilus mahii DSM 5219] gi|292667101|gb|ADE36950.1| Polyprenyl synthetase [Methanohalophilus mahii DSM 5219] Length = 292 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 15/184 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKK R ++ + + AL AIE IH SLIHDDL +D G +RRG T H Sbjct: 40 GGKKTRPVILLLSSRICGSEIENALDAALAIELIHSASLIHDDL--LDRGVLRRGVKTAH 97 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 Y A++AG+ L++ + E+ISS ++ M M G+ +D+ Sbjct: 98 EVYGTAAAMLAGDYLISKSIELISSYGKEIGTEFGRAGM----------EMAEGEAMDVD 147 Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + + + F + KT +L + GA +A A ++ + R FG LG +Q+ D Sbjct: 148 LLEKNINNRVEYFNCIEKKTASLFAASAVMGAYVAGADEDTVSKFRLFGNKLGTAYQIVD 207 Query: 226 DLLD 229 D+L+ Sbjct: 208 DMLE 211 >gi|289550751|ref|YP_003471655.1| Heptaprenyl diphosphate synthase component II [Staphylococcus lugdunensis HKU09-01] gi|289180283|gb|ADC87528.1| Heptaprenyl diphosphate synthase component II [Staphylococcus lugdunensis HKU09-01] Length = 318 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 19/201 (9%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91 ND +L LL GGK++R V +S F + + +V A+E IH +L+HDD Sbjct: 24 NDTVLEEASLHLLSSGGKRVRPAFVI-LSSQFGKSKQSEDTYKVAVALELIHMATLVHDD 82 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D RRG+ T+ ++D+ TAI+ GN LL E +S ++ R ++S + Sbjct: 83 V--IDKSDKRRGRLTISKKWDQTTAILTGNFLLALGLEQLSEV-----NHPRIHTIISTS 135 Query: 152 HNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKE 208 + + G++ QD+F ++T ++++ KT L+ A E GA+ ++ASQ Sbjct: 136 ----IVDVCRGELFQFQDQFNSNQTISNYLRRINRKTALLIQLATEVGALTSNASQQTVY 191 Query: 209 RLRCFGENLGIIFQLADDLLD 229 +L+ G +G+ FQ+ DD+LD Sbjct: 192 KLKMIGHYIGMSFQIIDDILD 212 >gi|300727537|ref|ZP_07060928.1| polyprenyl synthetase [Prevotella bryantii B14] gi|299775240|gb|EFI71841.1| polyprenyl synthetase [Prevotella bryantii B14] Length = 325 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 10/197 (5%) Query: 35 HNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 H D LLS + GK++R L+ A F +L +E +H SL+HDD+ Sbjct: 28 HTDGLLSQVLDHIKQRAGKRMRPMLILLMAKNFGKVSDVSLNAAVGLELLHTASLVHDDV 87 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D RRG+ +V+ Y+ A++ G+ LL+ A +S +++ S+L +L++ Sbjct: 88 --VDESDERRGQASVNASYNNKVAVLVGDYLLSTALLYVSYTHSEVIVRYLSELGRTLSN 145 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 LQ + +IQ+ I E + + MKT AL GA A AS + R Sbjct: 146 GEILQ------LSNIQNRTISEDAYYDVISMKTAALFEACAVIGAESAGASHEDTMAARE 199 Query: 213 FGENLGIIFQLADDLLD 229 FG+ LG+IFQ+ DD+ D Sbjct: 200 FGKKLGLIFQIRDDIFD 216 >gi|225024258|ref|ZP_03713450.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC 23834] gi|224943283|gb|EEG24492.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC 23834] Length = 339 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 103/194 (53%), Gaps = 12/194 (6%) Query: 39 LLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L+S I RY + GGK++R L + + + A +E IH +L+HDD+ +D Sbjct: 48 LISQIGRYIISAGGKRLRPVLTILSGKVLGYDEDPLYALAAMVEFIHTSTLLHDDV--VD 105 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIG 155 +RRG+ T + + A++ G+ L T AF++ +SS ++ D +M T+ I Sbjct: 106 ESELRRGRKTANNMFGNAAAVLVGDFLYTRAFQLMVSSGSLKILD-----VMADATNIIA 160 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 +L Q+++I + I E + + + KT L A + GAI+A A+ ++ L+ +G Sbjct: 161 EGEVL--QLMNIGNTNITEAEYVQVIQYKTAKLFEAAAQVGAILAGATPEQENALKDYGR 218 Query: 216 NLGIIFQLADDLLD 229 ++G FQ+ DD+LD Sbjct: 219 HIGTAFQIIDDVLD 232 >gi|39934591|ref|NP_946867.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009] gi|39648440|emb|CAE26961.1| geranylgeranyl pyrophosphate synthase [Rhodopseudomonas palustris CGA009] Length = 288 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 20/193 (10%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 RL +A+R A+ G ++R L A + N GAA+E +HC SLIHDDLP Sbjct: 26 RLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPGITEAAGAALELMHCASLIHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D +RRG+P+VH + E A++AG+ ++ AF+ I+ + Q + +L LT IG Sbjct: 86 DGADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQTIARAEGQ------ADRLLKLTQIIG 139 Query: 156 LQ-----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G++ GQ + + E + + KTGAL A A ++ ++ E Sbjct: 140 GAVGVPFGIVAGQAWECETEI----NLAHYHRSKTGALFVAATAM---GAASAGSDPEPW 192 Query: 211 RCFGENLGIIFQL 223 R GE +G +Q+ Sbjct: 193 RMVGEKIGEAYQV 205 >gi|33599305|ref|NP_886865.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50] gi|33575351|emb|CAE30814.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50] Length = 321 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 113/229 (49%), Gaps = 15/229 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + ++ K +D ++ D L ++T D ++ A GGK++R +V A Sbjct: 6 LIAPIADDMKAVDAVIRDRLNSDVVLIRTI-GDYIIGA------GGKRMRPAMVLMVARA 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 59 LGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLVGDYLY 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + +FE++ D++R +LS + +G + Q+L++ D + + + + + K Sbjct: 117 SRSFEMMVE-----ADSMRIMQILSQATTVIAEGEVL-QLLNVHDPDVSQERYLQVVRYK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T L A + GA++A AS ++ +G ++G FQL DD+LD D Sbjct: 171 TAKLFEAAAQVGAVLAGASPEQETAAAAYGRHVGAAFQLVDDVLDYSGD 219 >gi|329935839|ref|ZP_08285642.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045] gi|329304682|gb|EGG48557.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045] Length = 341 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 92/207 (44%), Gaps = 25/207 (12%) Query: 36 NDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 DR+ RYALL GK +R L+ A + + A+E +H SLIHDD+ Sbjct: 36 GDRMHEIARYALLAPGKLLRPLLLVASAEATGGSRSEVVPAALAVEYLHVASLIHDDV-- 93 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS------PKTQLKDNIR----- 143 +D +RRG+ +VH Y AI G+ LL F ++ P T + IR Sbjct: 94 IDGDDLRRGQSSVHALYGVPDAIATGDALLFRVFSAVAECVALGVPDTAVLAAIRVLAEA 153 Query: 144 -SQLMLSLTHNIGLQGML-GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 L L G LD E + +KTGAL+ AC +GA+++ Sbjct: 154 GGDLCRGQVQEAELAAAWPGAGGLDAYRE---------MASLKTGALLRAACRAGALLSG 204 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLL 228 S E E + F +LG+ FQ+ DDLL Sbjct: 205 GSPEETEAVTVFAGHLGLAFQMYDDLL 231 >gi|254444809|ref|ZP_05058285.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] gi|198259117|gb|EDY83425.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] Length = 305 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 3/194 (1%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A +AL G R+ + + +++ A +GA+IE H SLI DDLP MD+ Sbjct: 30 LFEAASHALEAEGSFSRANIAIGAGEILDMDTSRAEAIGASIELFHLASLILDDLPCMDD 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RR K H Y E AI+A G + A+ ++ +++ + + + +G Sbjct: 90 ASMRRSKECAHSVYGEGAAILAALGFINRAYSLLWDLFSEVGKEQQLEAADLVNDCLGFS 149 Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 G+L GQ DI +D +V I KTG+L+ AI++ AS+ +K L + Sbjct: 150 GILDGQSRDIHFEDSAGLGAEVRQIASQKTGSLIRLCLLLPAILSSASRYDKMHLTRLAQ 209 Query: 216 NLGIIFQLADDLLD 229 GI +Q+ADDL D Sbjct: 210 YWGIAYQVADDLKD 223 >gi|329297304|ref|ZP_08254640.1| polyprenyl synthetase [Plautia stali symbiont] Length = 323 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK IR + A N + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKHIRPMIAVLSARALNYQGSLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S +++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTS-----MGSLKILALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A ++ AI+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|42520637|ref|NP_966552.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410376|gb|AAS14486.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 328 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKKIR LV + N + + V A++E IH +L+HDD+ +D R G T + Sbjct: 50 GGKKIRPKLVFIICKMLNYSGENRINVAASVEFIHNATLLHDDV--LDESEARHGVKTAN 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++I+ G+ LLT AF + N+ +LS ++ ++G + QM Sbjct: 108 KIWGNKSSILVGDLLLTLAFRWLIECG-----NLNILSILSKASHLLVKGEIK-QMTARF 161 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D F I KT +L CE+ + ++ A+ +E ERL+ FG N G+ FQ+ DD+L Sbjct: 162 DPHTVRENYFDIIGEKTASLFSACCEAASTVSGATNDETERLKNFGFNFGMAFQIVDDML 221 Query: 229 D 229 D Sbjct: 222 D 222 >gi|71906297|ref|YP_283884.1| polyprenyl synthetase [Dechloromonas aromatica RCB] gi|71845918|gb|AAZ45414.1| Polyprenyl synthetase [Dechloromonas aromatica RCB] Length = 341 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 62 GGKRMRPALVLLAAGALDYQGTRHQEMAAVVEFIHTATLLHDDV--VDESALRRGRDTAN 119 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ + DN+R +LS N+ +G + Q+++ Sbjct: 120 AMFGNAASVLVGDFLYSRAFQMMVA-----VDNMRVMQVLSDATNVIAEGEVL-QLMNCH 173 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + KT L A + GAI+ A+ ++ L +G +LG FQL DD+L Sbjct: 174 DADVDEARYMQVIHYKTAKLFEAAAQLGAILGQATPEVEKALTAYGMHLGTAFQLIDDVL 233 Query: 229 D 229 D Sbjct: 234 D 234 >gi|323465974|gb|ADX69661.1| Trans-hexaprenyltranstransferase [Lactobacillus helveticus H10] Length = 326 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 11/201 (5%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 +QT H + + A G K +R L+ A + + + + ++IE +H +LIHD Sbjct: 28 IQTPHQSLQAALLTMADNGDKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHD 87 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D ++D+ +RRG ++ ++ + A+ AG+ L T F+++ T+ + +R+ +S Sbjct: 88 D--TIDDSDLRRGNISIQAEFGKDVAVYAGDLLFTNFFDLMLDTTTEHEYLVRNAQTMSH 145 Query: 151 THNIGLQGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 L G LG + +++ F D K KT AL A E GA A + + Sbjct: 146 I----LNGELGQMAERFNLEQTFTDYLNDI---KGKTAALFRLAAEEGAHFAGGNAEQST 198 Query: 209 RLRCFGENLGIIFQLADDLLD 229 L FGENLGI FQ+ DDLLD Sbjct: 199 ALANFGENLGIAFQIVDDLLD 219 >gi|110833312|ref|YP_692171.1| transferase [Alcanivorax borkumensis SK2] gi|110646423|emb|CAL15899.1| transferases [Alcanivorax borkumensis SK2] Length = 307 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 9/186 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + CA + V A IE +H +L+HDD+ +D +RRG+PTV+ Sbjct: 27 GGKRLRPLIAVLCARASGYQGSRHVDVAAIIEFLHTATLLHDDV--VDESNLRRGRPTVN 84 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L++ A +++ + + +I SQ +++ L Q+++++ Sbjct: 85 AVWGNAASVLVGDFLISRALQLMVALRHPRLLDIFSQSTNTISEGEVL------QLINVR 138 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDL 227 D E + KT + A E+GA++ A+ + + +G +LGI FQL DD+ Sbjct: 139 DPNTSEDNYMRVIHHKTAKMFESAAETGAVLGANDVSDHVDAFATYGRHLGIAFQLIDDV 198 Query: 228 LDCEED 233 LD + D Sbjct: 199 LDYQGD 204 >gi|119944297|ref|YP_941977.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37] gi|119862901|gb|ABM02378.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37] Length = 331 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ ++ A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 51 GGKRIRPLITVLAAKALGIHDQNTTKLAAIIEFIHTATLLHDDV--VDDSDLRRGKKTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ TQL+ N++ +LS NI +G + Q+++ Sbjct: 109 AVFGSAASVLVGDFLYTRSFQMM----TQLR-NLKVMDILSSATNIIAEGEVL-QLMNCN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + I KT L A + A++ S+ + L +G+ LG FQL DD++ Sbjct: 163 DPDTTEKKYMDIIYFKTAKLFEAATQLVAVLGEQSEEIETALLNYGKYLGTAFQLTDDVM 222 Query: 229 DCEED 233 D D Sbjct: 223 DYNSD 227 >gi|66043965|ref|YP_233806.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae B728a] gi|289674837|ref|ZP_06495727.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae FF5] gi|63254672|gb|AAY35768.1| Trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae B728a] gi|330941237|gb|EGH44102.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. pisi str. 1704B] gi|330954228|gb|EGH54488.1| trans-hexaprenyltranstransferase [Pseudomonas syringae Cit 7] gi|330977523|gb|EGH77469.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 322 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L +++ T I +L Q+ I+ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMKILSKATRIIAEGEVL--QLSKIR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + +A Q + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPQEQSEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|33595027|ref|NP_882670.1| octaprenyl-diphosphate synthase [Bordetella parapertussis 12822] gi|33565103|emb|CAE40054.1| octaprenyl-diphosphate synthase [Bordetella parapertussis] Length = 321 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPAMVLMVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ D++R +LS + +G + Q+L++ Sbjct: 101 AVFGNAASVLVGDYLYSRSFEMMVE-----ADSMRIMQILSQATTVIAEGEVL-QLLNVH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + + KT L A + GA++A AS ++ +G +G FQL DD+L Sbjct: 155 DPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGASPEQETAAAAYGRRVGTAFQLVDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSGD 219 >gi|269977600|ref|ZP_06184567.1| bifunctional short chain isoprenyl diphosphate synthase [Mobiluncus mulieris 28-1] gi|269934203|gb|EEZ90770.1| bifunctional short chain isoprenyl diphosphate synthase [Mobiluncus mulieris 28-1] Length = 339 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 112/236 (47%), Gaps = 31/236 (13%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L KL E R++ L + +TA+ T+ ++S +R A GGK++R LV + Sbjct: 10 ALEKKLTEALSRVEARLVEET-RTAAENTTE----IVSHLRAA--GGKRMRPLLVLLISQ 62 Query: 64 LFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 L N + G A+E H SL HDDL MD+ +RRG H++++ A++ Sbjct: 63 LGNAGGDAPISEDLIAAGVAVELTHLASLYHDDL--MDDATVRRGVTAAHVKWNNTLAVM 120 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFID 173 AG+ + A I+S +L H Q + GQM DI D+ ID Sbjct: 121 AGDLIFARASLIVSDFGRELMKY----------HARTFQRLCLGQMHDILGPGATDDPID 170 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + KTG+L+ A GA ++ S + FGE+LG+ FQ+ADD+LD Sbjct: 171 --FYLHVLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLD 224 >gi|227874599|ref|ZP_03992762.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC 35243] gi|227844808|gb|EEJ54954.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC 35243] Length = 339 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 112/236 (47%), Gaps = 31/236 (13%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L KL E R++ L + +TA+ T+ ++S +R A GGK++R LV + Sbjct: 10 ALEEKLTEALSRVEARLVEET-RTAAENTTE----IVSHLRAA--GGKRMRPLLVLLISQ 62 Query: 64 LFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 L N + G A+E H SL HDDL MD+ +RRG H++++ A++ Sbjct: 63 LGNAGGDAPISEDLIAAGVAVELTHLASLYHDDL--MDDATVRRGVTAAHVKWNNTLAVM 120 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFID 173 AG+ + A I+S +L H Q + GQM DI D+ ID Sbjct: 121 AGDLIFARASLIVSDFGRELMKY----------HARTFQRLCLGQMHDILGPGATDDPID 170 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + KTG+L+ A GA ++ S + FGE+LG+ FQ+ADD+LD Sbjct: 171 --FYLHVLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLD 224 >gi|239827501|ref|YP_002950125.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. WCH70] gi|239807794|gb|ACS24859.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. WCH70] Length = 320 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + V A+E IH SL+HDD+ +D+ +RRG+ T+ Sbjct: 43 GGKRIRPVFVLLAAKFGTYDIERIKHVAVALELIHMASLVHDDV--IDDAELRRGRKTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +++ A+ G+ + + E ++ + L I + ++ + G++ I+ Sbjct: 101 AKWNNRFAMYTGDYMFARSLEQMARLENPLAHRILANTIVEVCR---------GEIEQIK 151 Query: 169 DEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ D+ ++ K KT L+ +C+ GAI A+A+++ ERL FG +G+ FQ+ D Sbjct: 152 DKYRFDQNLRCYLRRIKRKTALLIAASCQLGAIAANAAKDVAERLYLFGYYVGMSFQITD 211 Query: 226 DLLD 229 D+LD Sbjct: 212 DILD 215 >gi|270307760|ref|YP_003329818.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp. VS] gi|270153652|gb|ACZ61490.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp. VS] Length = 324 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 14/208 (6%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 + S + Q + + Y L+GGK +R L A F L + + E +H Sbjct: 22 FKLVSERRKQSFPEMAEMLDYILVGGKVLRPALSMLSAMCFGAGIKKVLSLATSSEMLHI 81 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD ++D RRG+ TV+ + AI+ G+ L +A E + N+R Sbjct: 82 ATLVHDD--AIDKADTRRGRRTVNSVWGLEKAILLGDFLFAHAAETAAD-----TGNMRI 134 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAH 201 + + T LQ + G++ F D++ ++++ KT AL A + GAI+A Sbjct: 135 VTLFAQT----LQIIASGELKQAYASFNPDQSYENYLERISGKTAALFVMATKGGAILAD 190 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229 AS ++E +R +G NLG+ FQ+ DD+LD Sbjct: 191 ASPADEEIMRSYGYNLGLSFQIVDDILD 218 >gi|254435950|ref|ZP_05049457.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] gi|207089061|gb|EDZ66333.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] Length = 322 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 14/226 (6%) Query: 17 DTILDDLLLQTASHMQTQHNDR-LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTAL 73 D + DD+ A Q H+D L++ + + ++ GGK++R +V A F + Sbjct: 8 DLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQGSYHI 67 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + A IE IH +L+HDD+ +D+ +RRG+ T + + +++ G+ L + AFE++ Sbjct: 68 DIAAIIEFIHTATLLHDDV--VDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVG 125 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 D++R +L+ T N +G + Q+L+ + E I + KT L A Sbjct: 126 V-----DSMRVMEILARTTNTIAEGEVM-QLLNCHEPDTTEECYLEIIRSKTAKLFEAAT 179 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + GA++ H E++ + +G +LG FQL DD+LD EDL K Sbjct: 180 QLGAVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGK 225 >gi|194016766|ref|ZP_03055379.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus ATCC 7061] gi|194011372|gb|EDW20941.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus ATCC 7061] Length = 320 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+IR V +++N + V A+E IH SL+HDD+ +D+ +RRGKPT Sbjct: 43 GGKRIRPVFVLLSGMFGDYDINKIKY--VAVALELIHMASLVHDDV--IDDAELRRGKPT 98 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++D A+ G+ + + E ++ + I S++++ L G++ Sbjct: 99 IKAKWDNRIAMYTGDYMFARSLEYMTKINHPMAHEILSKMVVELCL---------GEIEQ 149 Query: 167 IQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 ++D++ +D+ ++ K KT L+ +C+ GAI A + + L FG +G+ +Q+ Sbjct: 150 VKDKYNMDQNLRTYLRRIKRKTALLIAGSCQLGAIAAGTDEKTHKALYWFGYYVGMSYQI 209 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE+L K Sbjct: 210 IDDVLDFTSTEEELGK 225 >gi|217970068|ref|YP_002355302.1| trans-hexaprenyltranstransferase [Thauera sp. MZ1T] gi|217507395|gb|ACK54406.1| Trans-hexaprenyltranstransferase [Thauera sp. MZ1T] Length = 322 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + + + A +E IH SL+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPALVLYAAGALDYRGVHHHELAAVVEFIHTASLLHDDV--VDESDLRRGKRTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +A++ G+ L + AF+++ D +R +L+ NI +G + Q+L+ Sbjct: 101 AAFGNASAVLVGDFLYSRAFQMMVGV-----DEMRVMRVLADATNIIAEGEVL-QLLNCH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + + + KT L A G I+A A ++RL FG +LG FQL DD+L Sbjct: 155 NADVVIEDYLRVIRYKTAKLFEAAARLGGIVAGADDALEQRLAAFGMHLGTAFQLIDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|295837107|ref|ZP_06824040.1| trans-hexaprenyltranstransferase [Streptomyces sp. SPB74] gi|197697218|gb|EDY44151.1| trans-hexaprenyltranstransferase [Streptomyces sp. SPB74] Length = 336 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 27/196 (13%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK+ R LV A + + +E H +L HDD+ MD +RRG + Sbjct: 51 LAGGKRFRPLLVMLAAQFGDPEAPGVVPSAVVVELTHLATLYHDDV--MDEATVRRGVES 108 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML- 165 + ++D A++ G+ L + A +I++ + +R Q + ++ GQ+L Sbjct: 109 ANARWDNSVAVLTGDFLFSRASQILAGLGPE---AVRIQAE-------AFERLVTGQILE 158 Query: 166 --------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 D D ++D + KTG+L+ A GA+M+ A E L +GE L Sbjct: 159 TAGPQDGRDPVDHYLD------VLSGKTGSLVAVATRYGAMMSGAGSEAVEILTQYGERL 212 Query: 218 GIIFQLADDLLDCEED 233 G+ FQLADD+LD D Sbjct: 213 GVAFQLADDVLDIASD 228 >gi|189460221|ref|ZP_03009006.1| hypothetical protein BACCOP_00858 [Bacteroides coprocola DSM 17136] gi|189433082|gb|EDV02067.1| hypothetical protein BACCOP_00858 [Bacteroides coprocola DSM 17136] Length = 324 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 30/191 (15%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A L+ + + L ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILVLLMAKLYGGINDSTLHAALSLELLHTASLVHDDV--VDESNKRRGQSSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------- 162 YD +++ G+ +L T L+ S T++I L G++ Sbjct: 103 LYDNKVSVLVGDYMLA----------TSLRH-------ASYTNHIELVGLVARLGQDLSE 145 Query: 163 ----QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 Q+++I + E F + + KT AL + ESGAI +A ++E E+ FGE +G Sbjct: 146 GEIIQLVNISNRDFSEEIYFDVIRKKTAALFTASAESGAISVNAPKDEVEKAVLFGEMIG 205 Query: 219 IIFQLADDLLD 229 I FQ+ DD+ D Sbjct: 206 IAFQIKDDIFD 216 >gi|88607042|ref|YP_505772.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ] gi|88598105|gb|ABD43575.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ] Length = 316 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 8/183 (4%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK+ R ++ + + V AAIE +H +L+HDD+ +D +RRG T Sbjct: 36 LSGGKRTRPVMLLAACGMLGCTDARRIVVAAAIEFLHSATLLHDDV--VDKSDMRRGVET 93 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + + +I+ G+ L AF+ I S ++I+ +LS T +I + G + Q++ Sbjct: 94 ANSIWGNKASILVGDFLFATAFQWIVSC-----NSIQLLSVLSNTASIIVSGEMQ-QLVH 147 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 I T+ I KT L ACES A++ ++ LR +G N GI+FQ+ DD Sbjct: 148 SSSLDISRTKYLEIISSKTAVLFSAACESAAVLHDVGTLQRNALRDWGFNFGIVFQILDD 207 Query: 227 LLD 229 +LD Sbjct: 208 ILD 210 >gi|299137617|ref|ZP_07030798.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8] gi|298600258|gb|EFI56415.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8] Length = 334 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 20/189 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR ++ A +R+GA +E +H +L+HDD+ +D RRG+P+ + Sbjct: 49 GGKRIRPMMLLLSARAVGCESEARIRLGAVVEMLHTATLVHDDI--IDEASTRRGRPSSN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDI 167 + ++AG+ L +F+ + + N R L++SLT Q M+ G++L + Sbjct: 107 TTWGNAKCVLAGDWLYMQSFQTALAER-----NFRILDLLISLT-----QQMVEGELLQM 156 Query: 168 QD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-----KERLRCFGENLGII 220 + I+E + F + KT L + + GA++A +E L +G NLG+ Sbjct: 157 EKLGHLINEEEYFDLIYRKTACLFKVSMQLGAVIAVPPTTPNAAPFEEALGEYGRNLGLA 216 Query: 221 FQLADDLLD 229 FQ+ DD+LD Sbjct: 217 FQIVDDVLD 225 >gi|302188811|ref|ZP_07265484.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. syringae 642] Length = 322 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L +++ T I +L Q+ I+ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMDVMKILSKATRIIAEGEVL--QLSKIR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + +AS+ + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNASEAQSEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|284047359|ref|YP_003397699.1| trans-hexaprenyltranstransferase [Conexibacter woesei DSM 14684] gi|283951580|gb|ADB54324.1| Trans-hexaprenyltranstransferase [Conexibacter woesei DSM 14684] Length = 323 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 104/220 (47%), Gaps = 24/220 (10%) Query: 14 KRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 +R++ L +L TA H Q +H ++A GGK++R LV A Sbjct: 23 ERVEQRLTEL---TAGHGQLLAEHAGTTIAA------GGKRLRPLLVLLAAGESAAPTDR 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EI 130 +R A+E IH SL+HDD+ +D +RRG+PTV A G+ L + AF E+ Sbjct: 74 LIRSAVAVELIHSASLVHDDV--LDRAPVRRGRPTVFAAAGRTVATATGDLLFSRAFAEL 131 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 +S + ++R+ LS + G L Q D D + + ++KTGAL Sbjct: 132 AASGEAA---DVRA---LSGASSALAAGELM-QRADAWDVGVSLDRYLERCELKTGALFE 184 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 AC GA+ A+ E L FG +G+ FQL DD+LD Sbjct: 185 AACRLGAL---ATAGPDEALAAFGRRIGLAFQLLDDVLDV 221 >gi|256830774|ref|YP_003159502.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028] gi|256579950|gb|ACU91086.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028] Length = 326 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + +++E +H +L+HDD+ +DN +RRGK H Sbjct: 45 GGKRLRPMLTLLFARALSFRGDNLQTLASSLEFLHSATLMHDDI--LDNSELRRGKRAAH 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++AG+ LL A EI++ + L I +M + T I ++ I Sbjct: 103 TLFGITPTVLAGDVLLALANEIVARTNNPALTSCISKAIMQTATGEIM-------EIAAI 155 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + I + I KT L+ ACE G I A S+ + + FG NLGI FQL DD Sbjct: 156 RKAHITRAEYIEIITGKTAYLIQSACEFGVIAAEGSERARAGAKTFGLNLGIAFQLVDDA 215 Query: 228 LD 229 LD Sbjct: 216 LD 217 >gi|330813965|ref|YP_004358204.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487060|gb|AEA81465.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 338 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 14/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + LF +++ A +E IH +L+HDD+ +D RRGK T + Sbjct: 57 GGKRLRPLLTIASSELFGYQGDRHIKLAACVELIHNATLLHDDV--IDKSDFRRGKKTNN 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +I+ G+ LL FEI+ ++D S +L L ++ + + G++L +Q Sbjct: 115 NLWGNKNSILTGDYLLGRCFEIM------VEDG--SLEVLKLLSSVSSE-IAQGEILQLQ 165 Query: 169 DEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E ET I KT +L + G + S+NEKE L FG NLGI FQ+ D Sbjct: 166 HEKEVETLEKTYLEIIGSKTSSLFAASMRVGGCINDKSKNEKEALTSFGFNLGICFQITD 225 Query: 226 DLLDCEED 233 D+LD D Sbjct: 226 DILDYYSD 233 >gi|157692773|ref|YP_001487235.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus SAFR-032] gi|157681531|gb|ABV62675.1| possible heptaprenyl diphosphate synthase component II [Bacillus pumilus SAFR-032] Length = 320 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+IR V +++N + V A+E IH SL+HDD+ +D+ +RRGKPT Sbjct: 43 GGKRIRPVFVLLSGMFGDYDINKIKY--VAVALELIHMASLVHDDV--IDDAELRRGKPT 98 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++D A+ G+ + + E ++ + I S++++ L G++ Sbjct: 99 IKAKWDNRIAMYTGDYMFARSLEYMTKINHPMAHEILSKMVVELCL---------GEIEQ 149 Query: 167 IQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 ++D++ +D+ ++ K KT L+ +C+ GAI A + + L FG +G+ +Q+ Sbjct: 150 VKDKYNMDQNLRTYLRRIKRKTALLIAGSCQLGAIAAGTDEKTHKALYWFGYYVGMSYQI 209 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE+L K Sbjct: 210 IDDVLDFTSTEEELGK 225 >gi|209886074|ref|YP_002289931.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5] gi|209874270|gb|ACI94066.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5] Length = 336 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L +++ AA+E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAMAQLAGYVGDGHIKLAAAVEFMHTATLLHDDV--VDESELRRGKLSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTE 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G ++A + E+ R G NLGI FQL DD+L Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPVIAERPKAEQTACRAVGMNLGIAFQLVDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|146281341|ref|YP_001171494.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501] gi|145569546|gb|ABP78652.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501] gi|327479520|gb|AEA82830.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri DSM 4166] Length = 322 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV S + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLSGSALGHQGEQLRLLAAIIEFLHTSTLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L +FE++ + I SQ + LQ + ++ Sbjct: 101 ALWGNAPSVLVGDFLYARSFEMMVELDSMPVMRIISQATRVIAEGEVLQ------LSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A +A AS+ ++E LR FG++LGI FQL DDLL Sbjct: 155 DASTTEEIYMEVIRGKTAMLFEASTHSAATLAGASEQQREALRTFGDHLGIAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYQGD 219 >gi|74100796|gb|AAZ99642.1| isoprenyl diphosphate synthase [Streptomyces sp. Tu4128] Length = 336 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVASAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 +++D A++ G+ L A +I++ + +R Q + + ++ GQ+L Sbjct: 111 VRWDNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ +C GA+M+ A + L +GE LG+ Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADETVVHVLTQYGERLGV 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDIASD 228 >gi|52080783|ref|YP_079574.1| heptaprenyl diphosphate synthase component II [Bacillus licheniformis ATCC 14580] gi|52786153|ref|YP_091982.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus licheniformis ATCC 14580] gi|319645260|ref|ZP_07999493.1| HepT protein [Bacillus sp. BT1B_CT2] gi|52003994|gb|AAU23936.1| heptaprenyl diphosphate synthase component II [Bacillus licheniformis ATCC 14580] gi|52348655|gb|AAU41289.1| HepT [Bacillus licheniformis ATCC 14580] gi|317393069|gb|EFV73863.1| HepT protein [Bacillus sp. BT1B_CT2] Length = 320 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 113/217 (52%), Gaps = 21/217 (9%) Query: 21 DDLLLQTASHMQTQHNDR-LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALR-VG 76 DD+ L +T H+D LLS LL GGK+IR V + +F ++ ++ V Sbjct: 12 DDIELIEKELEKTVHSDYPLLSEASLHLLQAGGKRIRPVFVL-LSGMFGEYDISKIKNVA 70 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 ++E IH SL+HDD+ +D+ +RRG+PT+ ++D A+ G+ L + E ++ Sbjct: 71 VSLELIHMASLVHDDV--IDDAELRRGQPTIKAKWDNRIAMYTGDYLFARSLEAMTKINE 128 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFA 192 I S+ ++ + G++ I+D++ E T + I++ KT L+ + Sbjct: 129 PKAHEILSKAIVEVCL---------GEIEQIKDKYNMEQNLRTYLRRIRR-KTALLIASS 178 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 C+ GAI A A +N + L FG +G+ +Q+ DD+LD Sbjct: 179 CQLGAIAAGAGENIHKTLYWFGYYVGMSYQIIDDILD 215 >gi|299134682|ref|ZP_07027874.1| Polyprenyl synthetase [Afipia sp. 1NLS2] gi|298590492|gb|EFI50695.1| Polyprenyl synthetase [Afipia sp. 1NLS2] Length = 336 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L +++ AA+E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAMAQLAGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESELRRGKLSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTE 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L A E G ++A+ + E+ R FG NLGI FQL DD+L Sbjct: 173 DEYL------AVIRGKTAELFAAASEVGPVIANRPKAEQTASRSFGMNLGIAFQLIDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|71483031|gb|AAZ32465.1| geranylgeranyl pyrophosphate synthase [uncultured euryarchaeote Alv-FOS1] Length = 352 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 112/249 (44%), Gaps = 34/249 (13%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-----RYALLGGKKIRSFLVT 59 +P + + ++D L + +T+ N LL Y L GGK++R+ L+ Sbjct: 1 MPDDWNSFMDKYKSKIEDTLSEFFEKKKTEVNHPLLREAVEIIEEYTLRGGKRVRALLMI 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----- 114 ++ ++ A +E + Y LIHDD+ MD +RRGK TVH Y+E Sbjct: 61 LGYRMYGGKDDEIIKAAATLELVQSYFLIHDDI--MDESDLRRGKKTVHKIYEEEHLHRG 118 Query: 115 -----------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 IIAG+ YAFEI + +T+ + + + + L + G GQ Sbjct: 119 FPGNPARFGENLGIIAGDLANVYAFEIFA--ETEFDSDRKERALQELERIMEYTGY--GQ 174 Query: 164 MLDIQDEFID---ETQVFMIQKMKTGALMCFACES-GAIMAHASQNEKERLRCFGENLGI 219 ++D+ + E + ++ + KT + + GAI+A A E E LR F +GI Sbjct: 175 LIDVYSSMLPEFGEKDLLLLHEYKTANYTIYGPLALGAILAGA---EPESLRDFAIPIGI 231 Query: 220 IFQLADDLL 228 FQL DD+L Sbjct: 232 AFQLQDDIL 240 >gi|326692210|ref|ZP_08229215.1| heptaprenyl diphosphate synthase, component II, putative [Leuconostoc argentinum KCTC 3773] Length = 324 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 16/196 (8%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +AIR L GK +R L + L + A+++GA++E +H +LIHDD+ +D Sbjct: 32 TAIRSQLNAGKLVRPALTLIFSKLTTTPYNQQAIQLGASVELLHLATLIHDDI--IDESK 89 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG ++ ++ + TA+ AG+ LLT F ++ +T L +QL L+ LQ + Sbjct: 90 LRRGYESIQSRFGKDTAVYAGDYLLTGMFSLLE--QTSLPQ--ANQLALT-----ALQDI 140 Query: 160 LGGQMLDIQDEF-IDET-QVFMIQ-KMKTGALMCFACESGAIMAHASQNE-KERLRCFGE 215 L G+++ F +D T ++ Q K KT AL + G I A ++ ++ + GE Sbjct: 141 LFGELVQKHHRFNVDATFDTYLSQIKGKTAALFKLSVTFGLISGQAIADDLQDTVSQLGE 200 Query: 216 NLGIIFQLADDLLDCE 231 NLGI FQL DD LD E Sbjct: 201 NLGITFQLLDDYLDFE 216 >gi|74100792|gb|AAZ99640.1| isoprenyl diphosphate synthase [Streptomyces mycarofaciens] Length = 336 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG P+ + Sbjct: 53 GGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEASVRRGVPSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++ A++ G+ L A +I++ + +R Q + + ++ GQ+L Sbjct: 111 TRWGNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ +C GA+M+ A + + L +GE LG+ Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGV 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDIASD 228 >gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 358 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 16/206 (7%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A+RYALL GGK++R L + A+ AA+E +H SL+HDDLP MD+ Sbjct: 86 LHEAMRYALLAGGKRVRPALCLAACVVSGGREAWAMAPAAAVEMVHTMSLVHDDLPCMDD 145 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---------PKTQLKDNIRSQLML 148 +RRGKPT H+ + E A++AG+ LL AF+ ++S P +R+ + Sbjct: 146 DDLRRGKPTCHVMFGEPIAVLAGDALLALAFQHMASVDSYPPDVDPAKHTARVVRA--IG 203 Query: 149 SLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 L IG +G++ GQ++D++ E + ++ I KT AL+ + GAI+ S+ Sbjct: 204 ELARCIGSEGLVAGQVVDLEMTGSTEPVPLDRLEYIHLHKTAALLEASVVIGAIIGGGSE 263 Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230 + ERLR + ++G++FQ+ DD+LD Sbjct: 264 EQIERLRKYARSIGLLFQVVDDILDV 289 >gi|77166478|ref|YP_345003.1| trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707] gi|76884792|gb|ABA59473.1| Trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707] Length = 345 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 14/226 (6%) Query: 17 DTILDDLLLQTASHMQTQHNDR-LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTAL 73 D + DD+ A Q H+D L++ + + ++ GGK++R +V A F + Sbjct: 31 DLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQGSYHI 90 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + A IE IH +L+HDD+ +D+ +RRG+ T + + +++ G+ L + AFE++ Sbjct: 91 DIAAIIEFIHTATLLHDDV--VDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVG 148 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 D++R +L+ T N +G + Q+L+ + E I + KT L A Sbjct: 149 -----VDSMRVMEILARTTNTIAEGEVM-QLLNCHEPDTTEECYLEIIRSKTAKLFEAAT 202 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + GA++ H E++ + +G +LG FQL DD+LD EDL K Sbjct: 203 QLGAVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGK 248 >gi|310815063|ref|YP_003963027.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25] gi|308753798|gb|ADO41727.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25] Length = 325 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 15/205 (7%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 S+MQ+ R+ + + GGK++R L A L + + + A +E IH +L Sbjct: 24 SYMQSDAAPRIRQVSAHLIDAGGKRLRPMLTVAAARLCGYDGPHHIHLAATVEFIHTATL 83 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D+ RRG+PT ++ +D +++++ G+ L + AF++++ I + Sbjct: 84 LHDDV--VDDSKQRRGRPTANLLWDNMSSVLVGDYLFSRAFQLMT---------ITGSMP 132 Query: 148 LSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 + + G++L + +D I + KT AL A GA++A Sbjct: 133 ILAALADASATIAEGEVLQLSTARDLSATPETYIRIARGKTAALFSAATRVGAMLAEPGD 192 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 + + +G+ LGI FQ+ADDLLD Sbjct: 193 AIVQAMHDYGDALGIAFQIADDLLD 217 >gi|160871595|ref|ZP_02061727.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella grylli] gi|159120394|gb|EDP45732.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella grylli] Length = 322 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 14/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A F R+ A++E IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLIALLSAKAFGYQGKEHRRLAASLELIHGATLLHDDV--IDGSVLRRGKKTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL---THNIGLQGMLGGQML 165 + +++ G+ L + AF++IS Q+ + S+++ SL T+ + +L Q++ Sbjct: 101 SLWGNSASVLVGDFLYSRAFQLIS----QINN---SRVLTSLADATNTLAQSEVL--QLI 151 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + + +DE + + KTG L A E A++ + E + +G +LGI FQL D Sbjct: 152 NCYNVDVDEAYCLKVIQGKTGVLFSIAAEQPAMLTERPEAEISAMAHYGMHLGIAFQLID 211 Query: 226 DLLDCEED 233 D LD D Sbjct: 212 DSLDYSGD 219 >gi|148244492|ref|YP_001219186.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius okutanii HA] gi|146326319|dbj|BAF61462.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius okutanii HA] Length = 323 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ CA + IE IH +L+HDD+ +D RRGK TV+ Sbjct: 44 GGKRLRPLLLLLCARATGYQGTHHYLMAVVIELIHTATLLHDDI--VDESSTRRGKDTVN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI 167 + +I+ G+ L + AFEI+ P N+ S + +LS T N +G + Q+L+ Sbjct: 102 EVWGNAPSILVGDFLYSRAFEIMVEP------NLMSIMCILSKTTNNIAEGEVL-QLLNC 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 Q++ + E + + + K KT L A + G +++ ++ ++ L+ +G +LG FQ+ DD+ Sbjct: 155 QNDELTEVEYYAVIKQKTACLFQAATQIGGLLSAVNKTQETALKNYGLHLGNAFQIIDDV 214 Query: 228 LDCEED 233 LD E D Sbjct: 215 LDYESD 220 >gi|239817188|ref|YP_002946098.1| trans-hexaprenyltranstransferase [Variovorax paradoxus S110] gi|239803765|gb|ACS20832.1| Trans-hexaprenyltranstransferase [Variovorax paradoxus S110] Length = 345 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + + A +E IH +L+HDD+ +D +RRG+PT + Sbjct: 66 GGKRLRPALLLLMSGALGYTGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTAN 123 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ +N+R +L+ N+ +G + Q++++ Sbjct: 124 ESFGNPASVLVGDFLYSRAFQMMLD-----ANNMRIMQILAEATNVIAEGEVL-QLMNMH 177 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE+ + + KT L + A++A A+ +E +G+ LG FQ+ DD+L Sbjct: 178 DATLDESAYLRVIRSKTAKLFEASTRLAAVLAGATPEVEEACATYGQALGTAFQVIDDVL 237 Query: 229 DCEED 233 D D Sbjct: 238 DYAGD 242 >gi|27377642|ref|NP_769171.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110] gi|27350787|dbj|BAC47796.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110] Length = 335 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L +++ A++E +H +L+HDD+ +D +RRGK + Sbjct: 54 GGKRLRPMLTLAMANLAGYTGDGHIKLAASVEFMHTATLLHDDV--VDESEMRRGKLSAR 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 112 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTE 171 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G ++A+ + E+ R G NLGI FQL DD+L Sbjct: 172 DEYL------AVIRGKTAELFAAACEVGPVIANRPKAEQTACRSVGMNLGIAFQLVDDVL 225 Query: 229 D 229 D Sbjct: 226 D 226 >gi|239928020|ref|ZP_04684973.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Streptomyces ghanaensis ATCC 14672] gi|291436352|ref|ZP_06575742.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672] gi|291339247|gb|EFE66203.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672] Length = 324 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 14/184 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L E A L A IEC+H SLIHDD+ +D +RRG+ + Sbjct: 43 GKLLRPILCMESAKAVGGTAEQVLAFAAGIECLHVASLIHDDI--VDQDPVRRGRASTAE 100 Query: 110 QYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 QY A++AG+GL + S P ++ R + L+ M G M + Sbjct: 101 QYGLAEALVAGDGLSMAGIAAMLSGGPAERVLHAARVTVE-------ALRHMCQGIMRET 153 Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D V + KT AL AC++GAI+A A+ + + L +GE LG+ FQ+ Sbjct: 154 EIRGDLTCAVPTVLNVIHDKTAALTGAACQAGAILAGATPGQTQALHQYGEQLGMAFQIR 213 Query: 225 DDLL 228 DDLL Sbjct: 214 DDLL 217 >gi|21227869|ref|NP_633791.1| dimethylallyltransferase [Methanosarcina mazei Go1] gi|20906283|gb|AAM31463.1| Dimethylallyltransferase [Methanosarcina mazei Go1] Length = 324 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 17/229 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L +++ S +D +D+LL T + L A RY + GGK++R ++ A Sbjct: 6 LVDEIKNRSSHVDAAIDELLPVT-------RPEELYKASRYLVDAGGKRLRPAVLILAAE 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 N + L A+E +H ++LIHDD+ D+ IRRG P VH+++ E AI+AG+ L Sbjct: 59 AVGSNLRSVLPAAVAVELVHNFTLIHDDIMDRDD--IRRGMPAVHVKWGEAGAILAGDTL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 + AFEI+S + + ++ +LS T + GQ LD+ E + E++ + Sbjct: 117 YSKAFEILSKVENEPVRVLKCMDVLSKTCT----EICEGQWLDMDFETRKKVTESEYLEM 172 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + KT L A + GA++ AS E L +G +GI FQ+ DD+LD Sbjct: 173 VEKKTSVLYAAAAKIGALLGGASDEVAEALSEYGRLIGIGFQMYDDVLD 221 >gi|224371856|ref|YP_002606022.1| IspB [Desulfobacterium autotrophicum HRM2] gi|223694575|gb|ACN17858.1| IspB [Desulfobacterium autotrophicum HRM2] Length = 327 Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + L N AL V E +H +L+HDD+ +D +RRG+ T H Sbjct: 46 GGKRLRPLLFLLSSRLCNYGGDLALDVSTLFEYLHAATLLHDDV--VDEAEMRRGRKTAH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++ G+ LL + + + N+ S + ++ QG + LD + Sbjct: 104 STWGAAQVVLTGDFLLARSLCLAARTGRPEIINVISGITEEMS-----QGEI--DQLDKK 156 Query: 169 DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + + E + I K KT L+ AC SGAI++ A + ++ L +G +LG+ FQ+ADDL Sbjct: 157 GKLNLSEAEYMAIIKGKTAVLIQGACRSGAILSRAPADREQALADYGYHLGMAFQMADDL 216 Query: 228 LDCEED 233 LD D Sbjct: 217 LDYTAD 222 >gi|258511659|ref|YP_003185093.1| Trans-hexaprenyltranstransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478385|gb|ACV58704.1| Trans-hexaprenyltranstransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 321 Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR C ++ AA+E IH +L+HDD+ +D +RRGKPTV Sbjct: 43 GGKRIRPLFALICGLGEREWSEDVAKIAAALEMIHMATLVHDDV--IDRADLRRGKPTVR 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y + A+ G+ L A ++++ DN+ +++ G+ + G++ I+ Sbjct: 101 KSYGNLAAMYTGDYLFARAIQLLAEV-----DNLEVHRLMAR----GIVLLCEGEIEQIE 151 Query: 169 DEFIDETQVFMIQ----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D F + +Q M KT L+ +C+ GA++ A + E L FG +G+ FQ+ Sbjct: 152 D-FYNWSQGVMTYLRRIHRKTALLISLSCQLGAMVGGAPEREVAALARFGHAVGMAFQIV 210 Query: 225 DDLLD 229 DDLLD Sbjct: 211 DDLLD 215 >gi|94497263|ref|ZP_01303835.1| Farnesyltranstransferase [Sphingomonas sp. SKA58] gi|94423368|gb|EAT08397.1| Farnesyltranstransferase [Sphingomonas sp. SKA58] Length = 378 Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L CA L ++ AA+E IH +L+HDD+ +D +RRG+ T + Sbjct: 97 GGKRLRPMLTLACADLVGYAGARHYKLAAAVEFIHTATLLHDDV--VDGSGMRRGRKTAN 154 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + +++ G+ L + +FE++ ++++ +LS + +G + Q+ + Sbjct: 155 IIWGNSASVLVGDFLFSRSFELMVE-----AESLKVLKILSGASAVIAEGEVN-QLTAQR 208 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E Q I KT AL AC A++A S+ E++ L +G NLGI FQL DD + Sbjct: 209 KIDTSEEQYLDIIGAKTAALFAAACRISAVVADRSEAEEQALDVYGRNLGIAFQLIDDAI 268 Query: 229 DCEED 233 D E D Sbjct: 269 DYESD 273 >gi|306817884|ref|ZP_07451623.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC 35239] gi|304649363|gb|EFM46649.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC 35239] Length = 339 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 31/236 (13%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L KL E R++ L + + ++ ++S +R A GGK++R LV + Sbjct: 10 ALEEKLTEALSRVEARLVE-----ETRTAQENTTEIVSHLRAA--GGKRMRPLLVLLISQ 62 Query: 64 LFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 L N + G A+E H SL HDDL MD+ +RRG H++++ A++ Sbjct: 63 LGNAGGDAPISEDLIAAGVAVELTHLASLYHDDL--MDDATVRRGVTAAHVKWNNTLAVM 120 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFID 173 AG+ + A I+S +L H Q + GQM DI D+ ID Sbjct: 121 AGDLIFARASLIVSDFGRELMKY----------HARTFQRLCLGQMHDILGPGATDDPID 170 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + KTG+L+ A GA ++ S + FGE+LG+ FQ+ADD+LD Sbjct: 171 --FYLHVLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLD 224 >gi|218961607|ref|YP_001741382.1| putative geranyltranstransferase [Candidatus Cloacamonas acidaminovorans] gi|167730264|emb|CAO81176.1| putative geranyltranstransferase [Candidatus Cloacamonas acidaminovorans] Length = 303 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 119/220 (54%), Gaps = 19/220 (8%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-----NHLT-- 71 L D L+ A + ++ L AI A++ GGK+ R L+ S+F + H T Sbjct: 23 LIDQELKNALTFEDKYATELKKAIYEAVIPGGKRWRPLLLL---SMFEMLTGFKKHRTFP 79 Query: 72 -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 AL+ AIE +H +++HDDLPS+ N RRG+P +HI+Y AI+A + L + A+EI Sbjct: 80 DALKSSVAIELLHNGAIVHDDLPSVMNRTQRRGQPALHIKYGNAIAILAADALYSLAYEI 139 Query: 131 ISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKMKTGA 187 IS +LK+ +S + + L++ GM+GGQ+ L + + + + I K G+ Sbjct: 140 IS----ELKNPEQSLEAIRILSNATKSYGMIGGQVVALSSRHKVMKINTLNYIDMKKVGS 195 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 L+ + + +++ A + + +R + NLGI +Q+ +D+ Sbjct: 196 LLQASADIACLLSRADEETHQVMRAYALNLGIAYQMIEDI 235 >gi|257452495|ref|ZP_05617794.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_5R] gi|317059036|ref|ZP_07923521.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_5R] gi|313684712|gb|EFS21547.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_5R] Length = 316 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/185 (34%), Positives = 93/185 (50%), Gaps = 15/185 (8%) Query: 50 GKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK R+ L+ CASL + ++ A +E H SLIHDD+ +D+ RRGK + Sbjct: 34 GKMFRTKLLLFCASLGPCYEEKKEKLCKLAAMVELTHLASLIHDDI--VDDSPYRRGKIS 91 Query: 107 VHIQYDEVTAIIAGNGLLT--YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + +Y + A+ AG+ L+ Y +E + S +LS T G +G + Sbjct: 92 IQGKYGKDAAVYAGDFLMARIYYYEAVERLN-------ESAALLSKTVEHMCTGEIGQDL 144 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +++ E IQ KT AL AC GA+ A SQ E+L+ FG NLG++FQL Sbjct: 145 CRYREDVSVEEYFQNIQG-KTAALFETACHIGAMEAGCSQEMIEKLKLFGRNLGMMFQLK 203 Query: 225 DDLLD 229 DD+LD Sbjct: 204 DDILD 208 >gi|311068789|ref|YP_003973712.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus 1942] gi|310869306|gb|ADP32781.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus 1942] Length = 320 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 17/194 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V N + V +E IH SL+HDD+ +D+ +RRGKPT+ Sbjct: 43 GGKRIRPVFVLLSGMFGNYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D A+ G+ +L + E+++ I SQ ++ + G++ I+ Sbjct: 101 AKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQIK 151 Query: 169 DEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ E + ++ + K KT L+ +C+ GAI + A + + L FG +G+ +Q+ D Sbjct: 152 DKYNMEQNLRTYLRRIKRKTAILIAVSCQLGAIASGADEKVHKALYWFGYYVGMSYQIID 211 Query: 226 DLLD---CEEDLPK 236 D+LD EE+L K Sbjct: 212 DILDFTSTEEELGK 225 >gi|5631299|dbj|BAA82615.1| farnesyl, geranylgeranyl, geranylfarnesyl, hexaprenyl, heptaprenyl diphosphate synthase (SelF-HepPS) [Synechococcus elongatus] Length = 324 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 11/191 (5%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 +RYAL GGK++R + A + A V AA+E +H ++LIHDD+ MD +R Sbjct: 30 VRYALASGGKRLRPLITLLAAEACGSSPADAAPVAAAVEILHNFTLIHDDI--MDRSPLR 87 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG+PTV+ +D+ TAI+AG+ ++ A+ ++S + L+ + + Sbjct: 88 RGRPTVYRAWDDATAILAGDTMMGIAYRLLSE---HYPAEVCQHLVAECSS--AFVDVCI 142 Query: 162 GQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GQ D+ + + +M KT L A +G I+A A + LR +G LG Sbjct: 143 GQAEDLAFRTMPSVTMDDYLRMIGRKTARLFATAAVAGGIVARAPHDVLAALRTYGTALG 202 Query: 219 IIFQLADDLLD 229 + FQ+ DD+LD Sbjct: 203 MAFQIRDDVLD 213 >gi|296111457|ref|YP_003621839.1| heptaprenyl diphosphate synthase, component II, putative [Leuconostoc kimchii IMSNU 11154] gi|295832989|gb|ADG40870.1| heptaprenyl diphosphate synthase, component II, putative [Leuconostoc kimchii IMSNU 11154] Length = 332 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 16/195 (8%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 AIR L GK +R L + L + ++ +A+ +GA++E +H +LIHDD+ +D + Sbjct: 41 AIRSQLNAGKLVRPALTLIFSRLTSESYNQSAISLGASVELLHLATLIHDDI--IDESKL 98 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG ++ Q+ + TA+ AG+ LLT F ++ + L+LT LQ +L Sbjct: 99 RRGHESIQSQFGKDTAVYAGDYLLTGMFSLLERADKPAANK------LALT---ALQEIL 149 Query: 161 GGQMLDIQDEF-IDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGEN 216 G++L Q+ + ID T F K KT AL + G + +E + GEN Sbjct: 150 FGELLQKQNRYNIDTTFSAYFSQIKGKTAALFKLSATFGLVSGTDYSDELFSTVSHLGEN 209 Query: 217 LGIIFQLADDLLDCE 231 +GI FQL DD LD E Sbjct: 210 IGITFQLLDDYLDFE 224 >gi|261345175|ref|ZP_05972819.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541] gi|282566867|gb|EFB72402.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541] Length = 323 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + +V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAILAGRSLGYSGHKHTQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+A+A+ +++ L+ +G +G FQL DDLL Sbjct: 155 DPNITEENYMQVIYSKTARLFEAASHASAILANATPAQEKALQDYGRYIGTAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|257466362|ref|ZP_05630673.1| heptaprenyl diphosphate synthase component II [Fusobacterium gonidiaformans ATCC 25563] gi|315917518|ref|ZP_07913758.1| heptaprenyl diphosphate synthase component II [Fusobacterium gonidiaformans ATCC 25563] gi|313691393|gb|EFS28228.1| heptaprenyl diphosphate synthase component II [Fusobacterium gonidiaformans ATCC 25563] Length = 316 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/185 (34%), Positives = 93/185 (50%), Gaps = 15/185 (8%) Query: 50 GKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK R+ L+ CASL + ++ A +E H SLIHDD+ +D+ RRGK + Sbjct: 34 GKMFRTKLLLFCASLGPCYEEKKEKLCKLAAMVELTHLASLIHDDI--VDDSPYRRGKIS 91 Query: 107 VHIQYDEVTAIIAGNGLLT--YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + +Y + A+ AG+ L+ Y +E + S +LS T G +G + Sbjct: 92 IQGKYGKDAAVYAGDFLMARIYYYEAVERLN-------ESAALLSKTVEHMCTGEIGQDL 144 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +++ E IQ KT AL AC GA+ A SQ E+L+ FG NLG++FQL Sbjct: 145 CRYREDVSVEEYFQNIQG-KTAALFETACHIGAMEAGCSQEMIEKLKLFGRNLGMMFQLK 203 Query: 225 DDLLD 229 DD+LD Sbjct: 204 DDILD 208 >gi|193216089|ref|YP_001997288.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110] gi|193089566|gb|ACF14841.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110] Length = 324 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 14/187 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IR LV A L + R A +E +H +L+HDD+ +D +RRG P V+ Sbjct: 44 GKQIRPALVLLSAKLVGGVNEGTYRAAALVELLHTATLVHDDV--VDTADMRRGLPAVNA 101 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ Y Q D L L++ + ++ M G++L I+ Sbjct: 102 LWKNKVAVLMGD----YLLARGLLLALQNGDT----LFLNIVSD-AVRRMSEGELLQIEK 152 Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 IDE F I KT +L+ ACE GA A + ++ LR GE LG+ FQ+ DD Sbjct: 153 TRHLDIDEETYFKIISDKTASLISTACELGAASASTDEKVRQSLRDCGEALGLAFQIRDD 212 Query: 227 LLDCEED 233 +LD + D Sbjct: 213 ILDYQGD 219 >gi|283780902|ref|YP_003371657.1| polyprenyl synthetase [Pirellula staleyi DSM 6068] gi|283439355|gb|ADB17797.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068] Length = 349 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 23/231 (9%) Query: 12 NSKRIDTILDDLLLQTASHMQ--TQHNDRLLSA--------IRYA-LLGGKKIRSFLVTE 60 NS IL+ L A+ MQ Q LS+ +RY LLGGK++R L+ Sbjct: 23 NSPATTAILNTLYAPVAAEMQLIEQRLRTELSSKHPFVDELVRYGCLLGGKRLRPALLLL 82 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + +E IH +L+HDD+ +D +RR TV+ ++D ++++ G Sbjct: 83 TGKALGGITPAHLTLATVVEMIHTATLVHDDV--LDEAKVRRHLATVNARWDNESSVLLG 140 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQMLDIQDEFIDETQVF 178 + L T+AF + S+ D + ++ NI +G L G + + + +++ F Sbjct: 141 DYLFTHAFHLAST-----LDTVVGCRVIGRATNIVCEGELLQKGSRGNFR---LTQSEYF 192 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I + KT L +C GA + AS +++ FG +LGI FQ+ADDLLD Sbjct: 193 EIIEGKTAELTACSCYLGAHFSAASVEVCDQMDGFGRDLGIAFQIADDLLD 243 >gi|317401225|gb|EFV81869.1| octaprenyl-diphosphate synthase [Achromobacter xylosoxidans C54] Length = 321 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPAMVLMVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ D++R +LS + +G + Q+L++ Sbjct: 101 AVFGNAASVLVGDYLYSRSFEMMVE-----ADSMRIMSILSEATTVIAEGEVL-QLLNVH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + + KT L A + GA++A A+ ++ +G ++G FQL DD+L Sbjct: 155 DPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSGD 219 >gi|134300012|ref|YP_001113508.1| trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1] gi|134052712|gb|ABO50683.1| Trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1] Length = 320 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 31/231 (13%) Query: 9 LQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 LQ I TI+ D LL QT+ H LL+A GGK++R + Sbjct: 12 LQVVEHEIKTIVQSRDPLLTQTSIH--------LLNA------GGKRLRPAFALLAGKFY 57 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + + L + A+E IH +L+HDD+ +D+ RRG PTV + ++ G+ L Sbjct: 58 HYSLEKLLPLAVALELIHMATLVHDDV--VDDSLTRRGTPTVKANWGNRISMHTGDYLFA 115 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQK 182 + +IS Q ++ + +Q++ + M G+M I + E F K Sbjct: 116 KSLVLIS----QYENPLIAQVLADTS-----VMMCEGEMHQISTAYSAEQSWRDYFYRIK 166 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT L+ +C+ GA+ A + E + LR +G +LG+ FQ+ DD+LD D Sbjct: 167 RKTALLIAASCQLGAVAVGAPEEEYKNLRRYGHHLGMAFQITDDILDMVAD 217 >gi|308069508|ref|YP_003871113.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase subunit 2) [Paenibacillus polymyxa E681] gi|305858787|gb|ADM70575.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase subunit 2) [Paenibacillus polymyxa E681] Length = 324 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 96/184 (52%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R V + R+ +E IH SL+HDD+ +D+ +RRG+PTV Sbjct: 43 GGKRLRPVFVLLGGKFGEYDLDKLKRIAVPLELIHSASLVHDDV--IDDAEMRRGQPTVK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D A+ G+ + A I + + S+ ++ ++ G+M I+ Sbjct: 101 SKWDNRVAMYTGDYIYARALSIAAGLPNPDIHRVLSKALVQMSI---------GEMEQIR 151 Query: 169 DEF-IDET-QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D F +D++ + ++++ + KT L+ +C+ GA+ A A ++ L +G N+G+ FQ+ D Sbjct: 152 DFFNVDQSVRNYLLRIRRKTALLIAVSCQLGAMAAGARESVNSLLYSYGYNVGMAFQIQD 211 Query: 226 DLLD 229 DLLD Sbjct: 212 DLLD 215 >gi|237730107|ref|ZP_04560588.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2] gi|226908713|gb|EEH94631.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2] Length = 370 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 90 GGKRIRPMIAVLAARAVGYQENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 147 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S +++ ++S N+ +G + Q++++ Sbjct: 148 AAFGNAASVLVGDFIYTRAFQMMTS-----LGSLKVLEVMSKAVNVIAEGEVL-QLMNVN 201 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A S+ +++ L+ +G LG FQL DDLL Sbjct: 202 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCSEEQEKGLQDYGRYLGTAFQLIDDLL 261 Query: 229 DCEED 233 D D Sbjct: 262 DYSAD 266 >gi|229845932|ref|ZP_04466044.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1] gi|229810936|gb|EEP46653.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1] Length = 323 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 97/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL ++++ +++ N+ +G + Q++++ Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D ET + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 155 DPETSETNYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQNYGRYLGTAFQLVDDVL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|260591948|ref|ZP_05857406.1| decaprenyl diphosphate synthase [Prevotella veroralis F0319] gi|260536232|gb|EEX18849.1| decaprenyl diphosphate synthase [Prevotella veroralis F0319] Length = 326 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK++R L+ A F +E +H SL+HDD+ +D RRG+ +V+ Sbjct: 44 AGKRMRPILILLIAKNFGKVSSITQHAAVGLELLHTASLVHDDV--VDEAAERRGQASVN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 YD A++ G+ +L+ A +S +++ ++L +L+ LQ + +IQ Sbjct: 102 ADYDNKVAVLVGDYVLSTALLHVSYTHSEMIVRRLAELGRTLSDGEILQ------LSNIQ 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 ++ + E + I + KT AL GA A A++ + E R FG+NLGI+FQ+ DD+ Sbjct: 156 NKEVTEEVYYKIIERKTAALFETCAAIGAESAGATEEQVEAARLFGKNLGIVFQIRDDIF 215 Query: 229 D 229 D Sbjct: 216 D 216 >gi|84494916|ref|ZP_00994035.1| putative polyprenyl diphosphate synthase [Janibacter sp. HTCC2649] gi|84384409|gb|EAQ00289.1| putative polyprenyl diphosphate synthase [Janibacter sp. HTCC2649] Length = 328 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 26/236 (11%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58 ++ GL +L + R++ ++++ + H+D ++ LL GGK+ R L Sbjct: 8 VSAGLQERLTDGLARVEALIEE---------RIDHDDPFIAEANVHLLRAGGKRFRPMLT 58 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 A L + + AA+E H SL HDD+ MD +RRG PT + Y TAI+ Sbjct: 59 ILAAELGEGVNDAVVTAAAAVELTHLASLYHDDV--MDEADLRRGTPTANAAYGNSTAIL 116 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQV 177 G+ L +A +++ + I+++ + L GQ+ D Q +++ Sbjct: 117 IGDLLFGHASALVAELGAEAV-RIQAETFIRLCT---------GQIRDDRQAPAGEDSGA 166 Query: 178 FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + ++ + KTG L+ A GA+ A + E +R +GE LG+ FQLADDL+D E Sbjct: 167 YYLRVLEDKTGVLIATAARYGAMFAGCEDDVIETMRVYGERLGMAFQLADDLIDIE 222 >gi|290958235|ref|YP_003489417.1| polyprenyl diphosphate synthase [Streptomyces scabiei 87.22] gi|260647761|emb|CBG70866.1| putative polyprenyl diphosphate synthase [Streptomyces scabiei 87.22] Length = 336 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG P+ + Sbjct: 53 GGKRFRPLLVMLAAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVPSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++D A++ G+ L A +++ D +R Q + ++ GQ+L Sbjct: 111 ARWDNSLAVLTGDFLFARASHVLADLG---PDAVRIQAE-------AFERLVTGQILETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ A GA+MA A + + L +GE LG+ Sbjct: 161 GPRDGRDPIDHYLD------VLGGKTGSLVAVAGRLGALMAGADETVVDVLTQYGERLGV 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDVASD 228 >gi|297529620|ref|YP_003670895.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. C56-T3] gi|297252872|gb|ADI26318.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. C56-T3] Length = 320 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 17/194 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + + V A+E IH SL+HDD+ +D+ +RRG+PT+ Sbjct: 43 GGKRIRPVFVLLSARFGHYDFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A+ G+ L + E ++ + + ++ ++ + H G++ I+ Sbjct: 101 ARWSNRFAMYTGDYLFARSLERMAELDSPRAHQVLAKTIVEVCH---------GEIEQIK 151 Query: 169 DEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ D+ ++++ KT L+ +C+ GA+ A A + +L FG +G+ FQ+ D Sbjct: 152 DKYRFDQPLRTYLRRIRRKTALLIAASCQLGALAAGAPEAVANQLYWFGHCVGMSFQITD 211 Query: 226 DLLD---CEEDLPK 236 D+LD EE L K Sbjct: 212 DILDFTGTEEQLGK 225 >gi|293602311|ref|ZP_06684757.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC 43553] gi|292819073|gb|EFF78108.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC 43553] Length = 321 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPAMVLMVARALGYEGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ D++R +LS + +G + Q+L++ Sbjct: 101 AVFGNAASVLVGDYLYSRSFEMMVE-----ADSMRIMSILSEATTVIAEGEVL-QLLNVH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + + KT L A + GA++A A+ ++ +G ++G FQL DD+L Sbjct: 155 DPDVSQDRYLQVVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSGD 219 >gi|288925940|ref|ZP_06419870.1| octaprenyl-diphosphate synthase [Prevotella buccae D17] gi|288337364|gb|EFC75720.1| octaprenyl-diphosphate synthase [Prevotella buccae D17] Length = 325 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 8/180 (4%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R L+ A F R +E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKRMRPMLILLMAKNFGEVTEVTQRATVGLELLHTASLVHDDV--VDESGERRGQASVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 Y+ A++ G+ +L+ A +S Q +QL +L++ LQ + +I++ Sbjct: 103 SYNNKVAVLVGDYILSTALLNVSLTGDQAIITYLAQLGRTLSNGEILQ------LTNIRN 156 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + I E + + + KT AL GA+ A + + E R FG+NLGIIFQ+ DD+ D Sbjct: 157 QEISEEVYYQVIRQKTAALFEACAGMGAMSTGAGREDIEAARKFGQNLGIIFQIRDDIFD 216 >gi|228476073|ref|ZP_04060781.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus hominis SK119] gi|228269896|gb|EEK11376.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus hominis SK119] Length = 318 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 19/201 (9%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91 ND +L + LL GGK++R V +S F +T V A+E IH +L+HDD Sbjct: 24 NDSVLQEAAFHLLSSGGKRVRPAFVL-LSSQFGPKKITEDTYHVAVALELIHMATLVHDD 82 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D RRGK T+ ++D TAI+ GN LL + +S + I S ++ + Sbjct: 83 V--IDKSDKRRGKLTIEKKWDVTTAILTGNFLLALGLKQLSKIEDHRVHTIISNAIVDVC 140 Query: 152 HNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G++ QD+F T KT L+ + E GAI + A Sbjct: 141 R---------GELFQFQDQFNSHQNITNYLRRINRKTALLIQLSTEVGAITSQADNETIR 191 Query: 209 RLRCFGENLGIIFQLADDLLD 229 +L+ G +G+ FQ+ DD+LD Sbjct: 192 KLKMIGHYIGMSFQIVDDILD 212 >gi|253573826|ref|ZP_04851169.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251847354|gb|EES75359.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 799 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 73/233 (31%), Positives = 117/233 (50%), Gaps = 18/233 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV-TECASLFN 66 +Q K +D IL + TAS + T+ + L+ Y+L G GK++R L ++ Sbjct: 512 VQTARKHVDAILP--ITSTASSLITE-DPLLVDTANYSLEGSGKRLRPILAWVMGVQVYG 568 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ + A+E +H SLI DDLPS DN RRGKPT+H ++ A + G L+ Sbjct: 569 LDPAALSPLFRALEYMHTASLIFDDLPSQDNSPSRRGKPTLHEVHNSAIAELTGIFLIQK 628 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--- 183 A E +S K +++ + L+ L+ G M GQ +D+ + +V ++++ Sbjct: 629 AVEEQASLKGFDNESVLA-LLQYLSRKAGEICM--GQAMDLN----AKGKVLTVEELDRI 681 Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTG + AI+A A++ E L+ F + GI FQ+ DDLLD E D Sbjct: 682 CFYKTGIAFEACLVAPAILARANETEIAVLKNFAYHTGIAFQIKDDLLDGEGD 734 >gi|331684834|ref|ZP_08385426.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H299] gi|331078449|gb|EGI49655.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H299] Length = 323 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + T+++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNATSVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|239918251|ref|YP_002957809.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] gi|281415557|ref|ZP_06247299.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] gi|239839458|gb|ACS31255.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] Length = 354 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 53/248 (21%) Query: 7 SKLQENSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 + L++ +++D+ L DDL TA+H L++A GGK++R L T ASL Sbjct: 29 TALEQVEEQLDSALGFDDLFSDTAAH-------HLMAA------GGKRVRPVL-TVLASL 74 Query: 65 FNVNHLT----------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 L A + +E H +L HDD+ MD +RRG P H + Sbjct: 75 LGDPALASGEVADVDAPARQAAVVMELTHLATLYHDDV--MDEAPVRRGAPAAHRLWGNS 132 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQG-----MLGGQMLDIQ 168 AI+AG+ + A SQLM L T + +Q ++ GQ+ + + Sbjct: 133 AAILAGDLIFARA----------------SQLMAELGTRPVQIQADTFERLVQGQLWETR 176 Query: 169 D--EFIDETQ-VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D + + + KTG+L+ A GA++ A + + +R +GE +G+ FQLAD Sbjct: 177 GPAEGTDPIEHYYAVLSGKTGSLIAAAGMLGALLGGADEAAVQVMRAYGEKVGLAFQLAD 236 Query: 226 DLLDCEED 233 DL+D D Sbjct: 237 DLIDLTGD 244 >gi|56420745|ref|YP_148063.1| heptaprenyl diphosphate synthase component II [Geobacillus kaustophilus HTA426] gi|56380587|dbj|BAD76495.1| heptaprenyl diphosphate synthasecomponent II (spore germination protein C3) [Geobacillus kaustophilus HTA426] Length = 320 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 17/194 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + + V A+E IH SL+HDD+ +D+ +RRG+PT+ Sbjct: 43 GGKRIRPVFVLLSARFGHYDFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A+ G+ L + E ++ + + ++ ++ + H G++ I+ Sbjct: 101 ARWSNRFAMYTGDYLFARSLERMAELDSPRAHQVLAKTIVEVCH---------GEIEQIK 151 Query: 169 DEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ D+ ++++ KT L+ +C+ GA+ A A + +L FG +G+ FQ+ D Sbjct: 152 DKYRFDQPLRTYLRRIRRKTALLIAASCQLGALAAGAPEAVANQLYWFGHCVGMSFQITD 211 Query: 226 DLLD---CEEDLPK 236 D+LD EE L K Sbjct: 212 DILDFTGTEEQLGK 225 >gi|319406067|emb|CBI79697.1| octaprenyl-diphosphate synthase [Bartonella sp. AR 15-3] Length = 337 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A +F +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 56 GGKRIRPMITLATAHMFEYQGDEHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTAR 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + +I+ G+ LL AF+++ ++ S LS+ N + G+++ + Sbjct: 114 ILWGNQASILVGDFLLGQAFKMMV--------DVGSLEALSVLSNAAAI-IAEGEVMQLS 164 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ET V I K KT AL A E G I+A E+ L +G +LG+ FQL D Sbjct: 165 AAKNIETNVSDYLKIIKAKTAALFSAAAEIGPIIAGYGHEERSALHQYGLSLGLAFQLID 224 Query: 226 DLLD 229 D+LD Sbjct: 225 DVLD 228 >gi|154245320|ref|YP_001416278.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2] gi|154159405|gb|ABS66621.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2] Length = 335 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L CASL +++ A++E +H +L+HDD+ +D +RRGK Sbjct: 54 GGKRLRPMLTLACASLSGYRGDGHVKLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + +I + + +Q + Sbjct: 112 KLWGNEASVLVGDFLLGQAFKMMVEVGSMTCLDILATAACVIAEGEVMQLAAAKNTATSE 171 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT L ACE GA++ + E+ R +G NLGI FQL DD L Sbjct: 172 DDYL------AVIRGKTAELFAAACEVGAVLGQRPKAEQAACRSYGMNLGIAFQLVDDAL 225 Query: 229 D 229 D Sbjct: 226 D 226 >gi|322831197|ref|YP_004211224.1| Polyprenyl synthetase [Rahnella sp. Y9602] gi|321166398|gb|ADW72097.1| Polyprenyl synthetase [Rahnella sp. Y9602] Length = 323 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 114/224 (50%), Gaps = 17/224 (7%) Query: 16 IDTILDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA 72 ID DD+ AS ++ +++ L++ + Y ++ GGK+IR + A + Sbjct: 7 IDLTQDDMAAVNASILEQLNSEVSLINQLGYYIISGGGKRIRPMIAVLAAKALSYQGDKH 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 ++V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T AF++++ Sbjct: 67 IKVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMT 124 Query: 133 SPKTQLKDNIRSQLMLSLTH---NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++ S +L+L N+ +G + Q+++ D I E + KT L Sbjct: 125 --------DLESLPVLALMAKAVNVIAEGEVQ-QLINCNDPDITEASYMQVIYSKTARLF 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A ++ A++A + + L+ +G LG FQL DDLLD + D Sbjct: 176 EAASQASAMLAGGNNEQITALQDYGRYLGTAFQLIDDLLDYDAD 219 >gi|90422801|ref|YP_531171.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18] gi|90104815|gb|ABD86852.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18] Length = 288 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 15/214 (7%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV-TECASLFNVNHL 70 + RI+ L D + A T RL A+RYA+ G ++R L + A+ N Sbjct: 4 TNRIERALTDAIGLAAV---TGCPPRLAEAMRYAVFPRGARVRPRLCHSVAAACGEDNPA 60 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 GAA+E +HC SL+HDDLP D RRG+P+VH + E A++ G+ L+ AF+ Sbjct: 61 ATEAAGAALELMHCASLVHDDLPCFDGAATRRGRPSVHKAFGEPLAVLTGDALIVLAFQT 120 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 I+ + + L +++ +G+ G++ GQ + + E + + KTGAL Sbjct: 121 IA--RVTCAPERLAALTMTIGQAVGVPFGIVAGQAWECESEI----NLAHYHRSKTGALF 174 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + A A ++ + E R GE +G +Q+ Sbjct: 175 ---VAATAAGAASAGADPEPWRLVGEKIGEAYQV 205 >gi|288931868|ref|YP_003435928.1| dimethylallyltranstransferase [Ferroglobus placidus DSM 10642] gi|288894116|gb|ADC65653.1| Dimethylallyltranstransferase [Ferroglobus placidus DSM 10642] Length = 318 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 17/226 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 ++E KR + + D++ + + ++L A R+ + GGK++R L Sbjct: 3 VEEIKKRAEIVNDEI----KKFLPVKEPEKLYKAARHLINAGGKRLRPVLSLIACEAIER 58 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ L AIE +H ++LIHDD+ MD +RRG TVH Y TAI+AG+ L A Sbjct: 59 DYRKILPAAVAIEVVHNFTLIHDDI--MDEDELRRGVKTVHTIYGVPTAILAGDTLFAEA 116 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF----MIQKM 183 F+I+S + + ++ + L+ + ++ + GQ +DI+ E + M++K Sbjct: 117 FKIMSYCEVESENLVNGMRKLA---EVCVE-ICEGQQMDIEFEEREFVSEEEYLEMVRK- 171 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L+ + AI+ + EK L +G N GI FQ+ DD+LD Sbjct: 172 KTSVLIALSSSIPAILFGEKKYEK-ALWNYGINAGIAFQIKDDILD 216 >gi|315606906|ref|ZP_07881913.1| octaprenyl-diphosphate synthase [Prevotella buccae ATCC 33574] gi|315251414|gb|EFU31396.1| octaprenyl-diphosphate synthase [Prevotella buccae ATCC 33574] Length = 325 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 8/180 (4%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R L+ A F R +E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKRMRPMLILLMAKNFGEVTEVTQRATVGLELLHTASLVHDDV--VDESGERRGQASVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 Y+ A++ G+ +L+ A +S Q +QL +L++ LQ + +I++ Sbjct: 103 SYNNKVAVLVGDYILSTALLNVSLTGDQAIITYLAQLGRTLSNGEILQ------LTNIRN 156 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + I E + + + KT AL GA+ A + + E R FG+NLGIIFQ+ DD+ D Sbjct: 157 QEISEEVYYQVIRQKTAALFEACAGMGAMSTGAGREDIEAARKFGQNLGIIFQIRDDIFD 216 >gi|29831407|ref|NP_826041.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] gi|29608522|dbj|BAC72576.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] Length = 336 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG P+ + Sbjct: 53 GGKRFRPLLVMLAARFGDPYAPGLVPSAVVVELTHLATLYHDDV--MDEADVRRGVPSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A++ G+ L A I++ + +R Q + ++ GQ+L+ Sbjct: 111 ARWGNSVAVLTGDFLFARASHILADLGPE---AVRVQAE-------AFERLVTGQILETA 160 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 V + KTGAL+ AC GA+M+ A + + L +GE LG+ FQLAD Sbjct: 161 GPMDGRDPVEHYLEVLSGKTGALVAVACRFGAMMSGADETVVDVLTQYGERLGVAFQLAD 220 Query: 226 DLLDCEED 233 D+LD D Sbjct: 221 DVLDIASD 228 >gi|303258213|ref|ZP_07344220.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47] gi|302858966|gb|EFL82050.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47] Length = 326 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 113/211 (53%), Gaps = 16/211 (7%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78 ++DDL Q+ + + +D +++A GGK++R ++ A + + Sbjct: 26 VIDDL--QSDIPLIKKISDYIVTA------GGKRMRPIVLMLIARALGYQGKEHIFLATM 77 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE +H SL+HDD+ +D +RRGKPT ++ AI+ G+ + + AF+++ +TQ Sbjct: 78 IEYVHTASLLHDDV--VDESDLRRGKPTAGFKWGNAAAILTGDFMYSRAFQLMV--RTQ- 132 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 N+R +++ N +G + Q+L+I D +DE + F + + KTG L A ++ Sbjct: 133 --NLRICEIVAGAVNRVSEGEVI-QLLNIHDTTLDEARYFDVIERKTGVLFEAAARMASV 189 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +A AS+ ++++ + LG FQ+ DD+LD Sbjct: 190 VAGASKEVEDKMAEYALCLGRAFQIIDDVLD 220 >gi|85714244|ref|ZP_01045232.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] gi|85698691|gb|EAQ36560.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] Length = 336 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L + +++ A++E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAMANLAGYSGEGHVKLAASVEFMHTATLLHDDV--VDESELRRGKLSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 113 MVWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTE 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G ++ + E+ FG NLGI FQL DD+L Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPVLGGRPKAEETAAASFGMNLGIAFQLVDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|306820179|ref|ZP_07453823.1| heptaprenyl diphosphate synthase component II [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551780|gb|EFM39727.1| heptaprenyl diphosphate synthase component II [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 317 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 97/186 (52%), Gaps = 13/186 (6%) Query: 48 LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 L GK +R L+ CA L + N ++ A +E H SLIHDD+ +DN RRGK Sbjct: 31 LSGKMLRPKLLLLCAFLGSNWKNNREKICKLAAMVELTHLASLIHDDI--VDNSPYRRGK 88 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQ 163 ++ +Y + A+ AG+ L++ F + ++N+ + +LS T G + Q Sbjct: 89 TSLQGKYGKDAAVFAGDFLISRIFHYGT------EENLNEAVSVLSKTVEYMCIGEIE-Q 141 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 L+ E I E + F I + KT AL AC GA A S+ ++L F +NLG++FQL Sbjct: 142 DLNRYREDISEKKYFEIIENKTAALFQVACHIGAKEAGCSEENIKKLELFVKNLGLMFQL 201 Query: 224 ADDLLD 229 DD+LD Sbjct: 202 KDDILD 207 >gi|89093572|ref|ZP_01166520.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92] gi|89082262|gb|EAR61486.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92] Length = 322 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A+ + + A IE IH +L+HDD+ +DN +RRGK T + Sbjct: 43 GGKRLRPLLVLLAANAAGYKGDKHVPLAAIIEFIHTATLLHDDV--VDNSDLRRGKDTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQMLD 166 ++ +++ G+ L + AF+I+ + Q+M +S N+ +G + Q+L+ Sbjct: 101 AKWGNAPSVLVGDFLYSRAFQIMVEIGSM-------QIMEVISNATNVIAEGEVL-QLLN 152 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++ E + KT L A E+GAI+A A+ E+E LR +G +LG FQL DD Sbjct: 153 TKNPDTTEEAYMQVILGKTAMLFEAATEAGAILADATAEEREGLRLYGLHLGTAFQLIDD 212 Query: 227 LLD 229 ++D Sbjct: 213 VMD 215 >gi|331000286|ref|ZP_08323970.1| octaprenyl pyrophosphate synthetase [Parasutterella excrementihominis YIT 11859] gi|329572452|gb|EGG54105.1| octaprenyl pyrophosphate synthetase [Parasutterella excrementihominis YIT 11859] Length = 326 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 113/211 (53%), Gaps = 16/211 (7%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78 ++DDL Q+ + + +D +++A GGK++R ++ A + + Sbjct: 26 VIDDL--QSDIPLIKKISDYIVTA------GGKRMRPIVLMLIARALGYQGKEHIFLATM 77 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE +H SL+HDD+ +D +RRGKPT ++ AI+ G+ + + AF+++ +TQ Sbjct: 78 IEYVHTASLLHDDV--VDESDLRRGKPTAGFKWGNAPAILTGDFMYSRAFQLMV--RTQ- 132 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 N+R +++ N +G + Q+L+I D +DE + F + + KTG L A ++ Sbjct: 133 --NLRICEIVAGAVNRVSEGEVI-QLLNIHDTTLDEARYFDVIERKTGVLFEAAARMASV 189 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +A AS+ ++++ + LG FQ+ DD+LD Sbjct: 190 VAGASKEVEDKMAEYALCLGRAFQIIDDVLD 220 >gi|28868024|ref|NP_790643.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato str. DC3000] gi|28851260|gb|AAO54338.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato str. DC3000] gi|330878952|gb|EGH13101.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966393|gb|EGH66653.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 322 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDIRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L +++ T I +L Q+ I+ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMKILSKATRIIAEGEVL--QLSKIR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + AS+ + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|319789063|ref|YP_004150696.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] gi|317113565|gb|ADU96055.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] Length = 324 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 20/191 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L L + V +E +H +L+HDD+ +D +RRG+P+V+ Sbjct: 43 GGKRVRPGLTVIAGKLVEAPLDRLIPVATVMEYMHTATLLHDDI--VDGAKLRRGRPSVN 100 Query: 109 IQYDEVTAIIAGNGLLT---YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + A++ G+ + Y + P+ LK ++ +Q M G++L Sbjct: 101 AVFGNDVAVLVGDYMFAKAIYVLAVYGGPEV-LKTAAKT-----------VQDMAEGELL 148 Query: 166 DIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 ++ D + E + F I KT +L+ CE GAI+ AS+ E++ L+ +G +G FQ Sbjct: 149 QLEKIGDINLTEEEYFDIIYRKTASLLSTCCECGAIVGGASEKERKALKDYGTYIGYAFQ 208 Query: 223 LADDLLDCEED 233 L DD D D Sbjct: 209 LVDDAFDYISD 219 >gi|304406942|ref|ZP_07388596.1| heptaprenyl diphosphate synthase component II [Paenibacillus curdlanolyticus YK9] gi|304343929|gb|EFM09769.1| heptaprenyl diphosphate synthase component II [Paenibacillus curdlanolyticus YK9] Length = 325 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V + F L ++ + +E IH SL+HDD+ +DN RRG+ TV Sbjct: 43 GGKRIRPIFVL-LSGKFGQYRLDVMKNIAVPLELIHMASLVHDDV--IDNAETRRGQLTV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++D A+ G+ + A + T+L DN R +LS + M G+M I Sbjct: 100 KSKWDNRIAMYTGDYIHGKALTV----ATKL-DNPRIHQILSK----AMVEMCIGEMEQI 150 Query: 168 QDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D F E V ++++ + KT L+ +C+ GA+ A + RL FG N+G+ FQ+ Sbjct: 151 RDFFNTEQSVRQYLLRIRRKTALLIAISCQLGALAAETDEKYANRLYRFGYNVGMAFQIR 210 Query: 225 DDLLD 229 DD+LD Sbjct: 211 DDVLD 215 >gi|296134998|ref|YP_003642240.1| Polyprenyl synthetase [Thiomonas intermedia K12] gi|295795120|gb|ADG29910.1| Polyprenyl synthetase [Thiomonas intermedia K12] Length = 326 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRLRPALLLLVSQALGFRGPQQHIMAAVVELIHTATLLHDDV--VDESSMRRGRETSN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ S + NI L+ N+ +G + Q+L++ Sbjct: 105 ALFGNSASVLVGDFLYSRAFQMMVSVGSMRILNI-----LADATNVIAEGEVL-QLLNMH 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A GA++A A N +E + G + G FQL DDLL Sbjct: 159 DPEVDEQRYLQVIRFKTAKLFEAAARIGAVLADADANTQEEMALAGRSFGTAFQLIDDLL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|163785166|ref|ZP_02179857.1| Polyprenyl synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159879568|gb|EDP73381.1| Polyprenyl synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 111 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/83 (51%), Positives = 53/83 (63%), Gaps = 2/83 (2%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSM 95 +L A+ Y+L GGK+IR LV E A N+L + + A+E IH YSLIHDDLPSM Sbjct: 29 KLFDAMHYSLNAGGKRIRPVLVLESAKACGKNNLEGIIDIALAVEIIHTYSLIHDDLPSM 88 Query: 96 DNGYIRRGKPTVHIQYDEVTAII 118 DN +RRGKPT H Y E AI+ Sbjct: 89 DNDDLRRGKPTCHKVYGEAVAIL 111 >gi|237747110|ref|ZP_04577590.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS] gi|229378461|gb|EEO28552.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS] Length = 329 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV A + A IE IH +L+HDD+ +D +RRG P+ + Sbjct: 50 GGKRIRPVLVLLMAKALGYQGKQHQTLAATIEFIHTATLLHDDV--VDESELRRGIPSAN 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++++ G+ L T AF+++ S N+R +L+ N+ +G + Q+++ + Sbjct: 108 ALFGNASSVLVGDFLYTRAFQMMVSV-----GNMRILEVLAEATNLIAEGEVM-QLMNAR 161 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + IDE + KT L + GA++AH S+ + FG +G+ FQL DD+L Sbjct: 162 NAAIDEDGYMKVIYAKTAKLFEASSVLGALVAHVSEEKIGAAARFGRAVGMAFQLIDDML 221 Query: 229 DCEED 233 D D Sbjct: 222 DYAGD 226 >gi|310642561|ref|YP_003947319.1| heptaprenyl diphosphate synthase component ii (spore germination protein c3) [Paenibacillus polymyxa SC2] gi|309247511|gb|ADO57078.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Paenibacillus polymyxa SC2] Length = 324 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R V + R+ +E IH SL+HDD+ +D+ +RRG+PTV Sbjct: 43 GGKRLRPVFVLLGGKFGEYDLDKLKRIAVPLELIHSASLVHDDV--IDDAEMRRGQPTVK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D A+ G+ + A I + + S+ ++ ++ G+M I+ Sbjct: 101 SKWDNRVAMYTGDYIYARALSIAAGLPNPDIHRVLSKALVQMSI---------GEMEQIR 151 Query: 169 DEF-IDET-QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D F +D++ + ++++ + KT L+ +C+ GA+ A A + L +G N+G+ FQ+ D Sbjct: 152 DFFNVDQSVRNYLLRIRRKTALLIAVSCQLGAMAAGARERVNSLLYTYGYNVGMAFQIQD 211 Query: 226 DLLD 229 DLLD Sbjct: 212 DLLD 215 >gi|212550626|ref|YP_002308943.1| octaprenyl-diphosphate synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548864|dbj|BAG83532.1| octaprenyl-diphosphate synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 328 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 8/180 (4%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IR ++ A L + + +E +H +LIHDD+ +DN +RRG P+V Sbjct: 49 GKRIRPIILILSAKLCGEPTIKTIEYAVILELLHVATLIHDDV--VDNAVLRRGNPSVMA 106 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 ++ A++ G+ +L+ A + + K+ Q++ L N+ +G L Q++ Sbjct: 107 KFGNQAAVLLGDYILSKAIK----QGIETKNFAILQVLTHLAQNLC-EGELT-QLIFSSK 160 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + IDE F I + KT L + GA+ +A + + L+ GE LGI FQ+ DDLLD Sbjct: 161 KIIDENHYFEIIRKKTAILFSVCSKIGALSVNADVKKNKTLQLIGEYLGICFQIRDDLLD 220 >gi|307701352|ref|ZP_07638373.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16] gi|307613513|gb|EFN92761.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16] Length = 339 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 31/236 (13%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L KL E +R++ L + +TA+ T+ ++S +R A GGK++R LV + Sbjct: 10 ALEEKLTEALERVEARLVEET-RTAAENTTE----IVSHLRAA--GGKRMRPLLVLLISQ 62 Query: 64 LFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 L + G A+E H SL HDDL MD+ +RRG H++++ A++ Sbjct: 63 LGKAGGDAPISEDLIAAGVAVELTHLASLYHDDL--MDDATVRRGVTAAHVKWNNTLAVM 120 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFID 173 AG+ + A I+S +L + H Q + GQM DI D+ ID Sbjct: 121 AGDLIFARASLIVSDFGRKLMKH----------HARTFQRLCLGQMHDILGPGATDDPID 170 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + KTG+L+ A GA ++ S + FGE+LG+ FQ+ADD+LD Sbjct: 171 --FYLHVLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLD 224 >gi|314936397|ref|ZP_07843744.1| heptaprenyl diphosphate synthase, component II [Staphylococcus hominis subsp. hominis C80] gi|313655016|gb|EFS18761.1| heptaprenyl diphosphate synthase, component II [Staphylococcus hominis subsp. hominis C80] Length = 318 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 19/201 (9%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91 ND +L + LL GGK++R V +S F +T V A+E IH +L+HDD Sbjct: 24 NDSVLQEAAFHLLSSGGKRVRPAFVL-LSSQFGPKKITEDTYHVAVALELIHMATLVHDD 82 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D RRGK T+ ++D TAI+ GN LL + +S + I S ++ + Sbjct: 83 V--IDKSDKRRGKLTIEKKWDITTAILTGNFLLALGLKQLSKIEDHRVHTIISNAIVDVC 140 Query: 152 HNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G++ QD+F T KT L+ + E GAI + A Sbjct: 141 R---------GELFQFQDQFNSHQNITNYLRRINRKTALLIQLSTEVGAITSQADNETIR 191 Query: 209 RLRCFGENLGIIFQLADDLLD 229 +L+ G +G+ FQ+ DD+LD Sbjct: 192 KLKMIGHYIGMSFQIVDDILD 212 >gi|118497514|ref|YP_898564.1| octaprenyl diphosphate synthase [Francisella tularensis subsp. novicida U112] gi|195536208|ref|ZP_03079215.1| polyprenyl synthetase family protein [Francisella tularensis subsp. novicida FTE] gi|118423420|gb|ABK89810.1| octaprenyl diphosphate synthase [Francisella novicida U112] gi|194372685|gb|EDX27396.1| polyprenyl synthetase family protein [Francisella tularensis subsp. novicida FTE] Length = 325 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N N L A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 44 GGKRLRPLLVMLFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ S DN++ Q++ T+ I +L Q+L+ Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ---NEKERLRCFGENLGIIFQLA 224 ++ + E + + KT L ACE +++ Q N ++ +R +G LG FQ+A Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIA 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDVLDYVSD 223 >gi|110668786|ref|YP_658597.1| trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase) [Haloquadratum walsbyi DSM 16790] gi|109626533|emb|CAJ52996.1| probable trifunctional short-chain (E)-prenyl diphosphate synthase (probable dimethylallyltransferase / probable geranyltranstransferase / probable farnesytranstransferase) [Haloquadratum walsbyi DSM 16790] Length = 348 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 28/217 (12%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTA---------------LRVG 76 Q +RL A RY L GGK++R + A SL +V+ LTA + Sbjct: 32 QSPERLYEATRYLLEAGGKRLRPTVALLTAESLADVDPLTADYRSFPALDGSEVDVMSAA 91 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 +IE I ++LIH MD+ +RRG P VH +YD TAI+AG+ L AFE++S+ Sbjct: 92 TSIEVIQSFTLIH--DDIMDDDDLRRGVPAVHREYDTETAILAGDTLYAKAFELLSNTGA 149 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFA 192 + + + L+ T + GQ LD++ D + E + M++ +KT L A Sbjct: 150 DPANGVAAVSRLATT----CTQICEGQALDVEFEHRDAVLPEEYLEMVE-LKTAVLYGAA 204 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A++ A + + L +G + G FQ+ DD+LD Sbjct: 205 TSTTALLLDADADVVDALYQYGIDAGRAFQIQDDVLD 241 >gi|213971072|ref|ZP_03399192.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato T1] gi|301384205|ref|ZP_07232623.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato Max13] gi|302060871|ref|ZP_07252412.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato K40] gi|302132864|ref|ZP_07258854.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924180|gb|EEB57755.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato T1] gi|331018359|gb|EGH98415.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 322 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDIRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L +++ T I +L Q+ I+ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMKILSKATRIIAEGEVL--QLSKIR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + AS+ + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|237801840|ref|ZP_04590301.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024698|gb|EGI04754.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 319 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDIRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L +++ T I +L Q+ I+ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMKILSKATRIIAEGEVL--QLSKIR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + AS+ + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|182412394|ref|YP_001817460.1| polyprenyl synthetase [Opitutus terrae PB90-1] gi|177839608|gb|ACB73860.1| Polyprenyl synthetase [Opitutus terrae PB90-1] Length = 306 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/182 (34%), Positives = 88/182 (48%), Gaps = 2/182 (1%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R+ LV A + A ++ AIE H SL+ DDLP MDN RRG+P VH Sbjct: 43 GKLVRAQLVLIGAEQHGWSAAAAEQLACAIEFFHVASLVLDDLPCMDNAETRRGQPCVHR 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 ++ + TAI+A L+ A+ + + +R + L +G G++GGQ D+ Sbjct: 103 RHGDATAILAALALINRAYALAGEAFLRAPRTVRRAAVTCLHRALGHAGLVGGQAWDLAF 162 Query: 170 EFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D + V I KTGAL A+ A AS E+ LR G+ FQ ADDL Sbjct: 163 ARTDRSSRTVAKIAAAKTGALFELTVLLPALAAPASGVERRWLRALCVYWGLQFQAADDL 222 Query: 228 LD 229 D Sbjct: 223 RD 224 >gi|225791079|gb|ACO31283.1| PtmT4 [Streptomyces platensis] Length = 348 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 12/188 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK IR+ L A + A+ AA+E +H +SL+HDD+ MD RRG+PTV Sbjct: 64 GGKMIRAALTILAAEACGGDARQAVPGAAAVELVHNFSLLHDDV--MDRDLERRGRPTVW 121 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ AI+AG+ LL A + ++ + + + GQM D+ Sbjct: 122 SKFGTPAAILAGDILLARACGMFDEASGHQGWATKALI-------DAIAELAAGQMADLA 174 Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + + + + KT AL+ AC GA + A R FG +LG+ FQL D Sbjct: 175 LERRATVTLEEALTVSEQKTAALLRCACTLGAGLVGAPDGTSRRFGAFGMHLGMAFQLVD 234 Query: 226 DLLDCEED 233 D+L D Sbjct: 235 DVLGIWGD 242 >gi|254448914|ref|ZP_05062369.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015] gi|198261451|gb|EDY85741.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015] Length = 322 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPQLAVLAARAAGYQGEDHLQIAAIIEFIHTATLLHDDV--VDASELRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L + +FE++ D++R +LS N+ +G + Q+L+I Sbjct: 101 AVFGNEAAVLVGDFLYSRSFEMMVEL-----DSMRIMSILSRATNVIAEGEVM-QLLNIH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L A GA+++ Q +++ L +G +LG FQL DD+L Sbjct: 155 DADTTEARYLEVIHSKTAKLFEAATRIGAVLSGLPQEKEQALADYGMHLGTAFQLIDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|319400819|gb|EFV89038.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus epidermidis FRI909] Length = 319 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 20/202 (9%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90 +D+ L + LL GGK++R V + F N+ T+ RV A+E IH +L+HD Sbjct: 24 SDQTLQDASFHLLSSGGKRVRPAFVI-LSGQFGSNNKTSEDTYRVAVALELIHMATLVHD 82 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ +D RRG+ T+ ++D+ TAI+ GN LL + +S S + Sbjct: 83 DV--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEI---------SDTRVHT 131 Query: 151 THNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEK 207 T + + + G++ QD+F ++T ++++ KT L+ + + GAI ++AS + Sbjct: 132 TISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSNASNDVI 191 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 +L+ G +G+ FQ+ DD+LD Sbjct: 192 RKLKMIGHYIGMSFQIIDDVLD 213 >gi|318057825|ref|ZP_07976548.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG] gi|318080208|ref|ZP_07987540.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF] Length = 306 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 27/196 (13%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK+ R LV A + + +E H +L HDD+ MD +RRG + Sbjct: 21 LAGGKRFRPLLVMLAAQFGDPEAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVDS 78 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML- 165 + ++D A++ G+ L + A +I++ + +R Q + ++ GQ+L Sbjct: 79 ANARWDNSVAVLTGDFLFSRASQILAGLGPE---AVRIQAE-------AFERLVTGQILE 128 Query: 166 --------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 D D ++D + KTG+L+ A GA+M+ A E L +GE L Sbjct: 129 TAGPRDGRDPVDHYLD------VLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYGERL 182 Query: 218 GIIFQLADDLLDCEED 233 G+ FQLADD+LD D Sbjct: 183 GVAFQLADDVLDIASD 198 >gi|311030284|ref|ZP_07708374.1| heptaprenyl diphosphate synthase component II [Bacillus sp. m3-13] Length = 320 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 102/194 (52%), Gaps = 17/194 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A L + V A+E +H SL+HDD+ +D+ +RRGK T+ Sbjct: 43 GGKRIRPVFVLLAAKLGAYDIHKVKNVAVALELMHMASLVHDDV--IDDAELRRGKSTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D A+ G+ + + E++ T+++D I + +LS T L + G++ I+ Sbjct: 101 AKWDNRIAMYTGDYIFARSLEMM----TKVED-IEAHRILSNT----LVELCKGEIEQIR 151 Query: 169 DEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ D+ ++ K KT L+ +C+ GAI + + + L FG +G+ FQ+ D Sbjct: 152 DKYNYDQNLRTYLRRIKRKTAILIAVSCQLGAITSGVPASVHQSLYWFGYYVGMSFQITD 211 Query: 226 DLLD---CEEDLPK 236 D+LD EE L K Sbjct: 212 DILDFTSTEEQLGK 225 >gi|254427749|ref|ZP_05041456.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881] gi|196193918|gb|EDX88877.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881] Length = 323 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 9/186 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + CA + V A IE +H +L+HDD+ +D +RRG+PTV+ Sbjct: 43 GGKRLRPLIAILCARAAGYQGDRHVDVAAIIEFLHTATLLHDDV--VDESNLRRGRPTVN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L++ A +++ + + +I SQ +++ L Q+++++ Sbjct: 101 AVWGNAASVLVGDFLISRALQLMVALRHPRLLDIFSQSTNTISEGEVL------QLINVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDL 227 D E + KT + A E+GA++ A + + +G +LGI FQL DD+ Sbjct: 155 DPNTSEENYMRVIHHKTAKMFESAAETGAVLGADEVSDHVDAFATYGRHLGIAFQLIDDV 214 Query: 228 LDCEED 233 LD + D Sbjct: 215 LDYQGD 220 >gi|282858641|ref|ZP_06267799.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010] gi|282588559|gb|EFB93706.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010] Length = 326 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 10/197 (5%) Query: 35 HNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 H+D LLS + + + GGK++R L+ A F +E +H SLIHDD+ Sbjct: 28 HDDGLLSQVLHHIKQRGGKRMRPILILLIAKNFGQISSVTQHAAVGLELLHTASLIHDDV 87 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D RRG+ +V+ Y+ A++ G+ +L+ A +S L ++L +L+ Sbjct: 88 --VDESSQRRGQASVNASYNNKVAVLVGDYVLSTALLQVSYTNANLIVRYLAELGQTLSD 145 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 LQ + +IQ E I E I KT L GA A AS+++ R Sbjct: 146 GEILQ------LSNIQREQITEEAYLQIIARKTAILFEICAAIGAESAGASKDDVALARA 199 Query: 213 FGENLGIIFQLADDLLD 229 FG++LG+IFQ+ DD+ D Sbjct: 200 FGKDLGMIFQIRDDIFD 216 >gi|254780755|ref|YP_003065168.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040432|gb|ACT57228.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 322 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 100/190 (52%), Gaps = 11/190 (5%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++Y + GGK++R L A + + + AIE IH +L+HDD+ +D+ + Sbjct: 33 VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGM 159 RRGK + + T+++ G+ LL+ AF ++ K+Q + + + +++ T G L+ + Sbjct: 91 RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--EALEALSLVACTLAEGELRQL 148 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + LD+ +E + K KT L A E +++A + ++ L+ +G NLGI Sbjct: 149 SLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 204 AFQLVDDVLD 213 >gi|302524796|ref|ZP_07277138.1| farnesyl diphosphate synthase [Streptomyces sp. AA4] gi|302433691|gb|EFL05507.1| farnesyl diphosphate synthase [Streptomyces sp. AA4] Length = 340 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 15/181 (8%) Query: 51 KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110 K +R LV CA + A+ A+E H +SL+HDD+ MD RR +PT Sbjct: 63 KALRPALVLLCAEACGGDPEDAVPAAVAVELAHNFSLLHDDV--MDGDRTRRHRPTAWTV 120 Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170 + A++AG+ LL AF+++S+ D + +LS + +L GQ D+ E Sbjct: 121 FGTGQAVLAGDSLLALAFDVLSA------DGPAAARLLS----TAVLDLLHGQHEDLAFE 170 Query: 171 FIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + +V +M KT AL+ AC G ++ ER FG +LG+ FQ DDL Sbjct: 171 QRTDVEVAECVRMAQGKTAALLSAACTLGVLVVGGRGEHVERFGRFGRSLGLAFQHVDDL 230 Query: 228 L 228 L Sbjct: 231 L 231 >gi|212638936|ref|YP_002315456.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus WK1] gi|212560416|gb|ACJ33471.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus WK1] Length = 320 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 18/205 (8%) Query: 31 MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSL 87 + Q +D L++ LL GGK+IR V F H + RV A+E IH SL Sbjct: 23 LTVQASDPLVNEASLHLLEAGGKRIRPVFVL-LGGQFGTYHFEKMKRVAVALELIHMASL 81 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D +RRGK T+ ++ + A+ G+ L A E + + I + + Sbjct: 82 VHDDV--IDGAMLRRGKETIQAKWGDRFAMYVGDYLFARALEQMCEIDDPVAHRILANTI 139 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQ 204 + + G++ I D++ D+ +Q K KT L+ +C+ GA++A A + Sbjct: 140 VEVCR---------GEIEQISDKYRFDQNLRRYLQRIKRKTALLIAASCQLGAVVAGAPE 190 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 ++L FG +G+ FQ+ DD+LD Sbjct: 191 TIHKKLYWFGYYVGMSFQITDDILD 215 >gi|163841369|ref|YP_001625774.1| farnesyl pyrophosphate synthetase [Renibacterium salmoninarum ATCC 33209] gi|162954845|gb|ABY24360.1| farnesyl pyrophosphate synthetase [Renibacterium salmoninarum ATCC 33209] Length = 375 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 89/187 (47%), Gaps = 19/187 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV A L + + +R +E H +L HDD+ MD+ RRG PT H Sbjct: 94 GGKRIRPLLVLLAAHLGDSSRPEVIRAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAH 151 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + AI+ G+ + A ++S P+ L R+ L L GQ+ + Sbjct: 152 EVWGNSVAILTGDLIFARASILVSELGPRA-LGIQARTFERLCL-----------GQLHE 199 Query: 167 IQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 DE V + KTG+L+ + + GAI A + ++ L +GE +G+ FQL Sbjct: 200 TVGPRPDEDPVDHYISVVSDKTGSLVSASGQLGAIFAEVPEPIQDVLVEYGEKVGVAFQL 259 Query: 224 ADDLLDC 230 ADD++D Sbjct: 260 ADDVIDV 266 >gi|333025098|ref|ZP_08453162.1| putative heptaprenyl diphosphate synthase component II [Streptomyces sp. Tu6071] gi|332744950|gb|EGJ75391.1| putative heptaprenyl diphosphate synthase component II [Streptomyces sp. Tu6071] Length = 326 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 27/196 (13%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK+ R LV A + + +E H +L HDD+ MD +RRG + Sbjct: 41 LAGGKRFRPLLVMLAAQFGDPEAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVDS 98 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML- 165 + ++D A++ G+ L + A +I++ + +R Q + ++ GQ+L Sbjct: 99 ANARWDNSVAVLTGDFLFSRASQILAGLGPE---AVRIQAE-------AFERLVTGQILE 148 Query: 166 --------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 D D ++D + KTG+L+ A GA+M+ A E L +GE L Sbjct: 149 TAGPRDGRDPVDHYLD------VLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYGERL 202 Query: 218 GIIFQLADDLLDCEED 233 G+ FQLADD+LD D Sbjct: 203 GVAFQLADDVLDIASD 218 >gi|302521213|ref|ZP_07273555.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. SPB78] gi|302430108|gb|EFL01924.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. SPB78] Length = 336 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 27/196 (13%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK+ R LV A + + +E H +L HDD+ MD +RRG + Sbjct: 51 LAGGKRFRPLLVMLAAQFGDPEAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVDS 108 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML- 165 + ++D A++ G+ L + A +I++ + +R Q + ++ GQ+L Sbjct: 109 ANARWDNSVAVLTGDFLFSRASQILAGLGPE---AVRIQAE-------AFERLVTGQILE 158 Query: 166 --------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 D D ++D + KTG+L+ A GA+M+ A E L +GE L Sbjct: 159 TAGPRDGRDPVDHYLD------VLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYGERL 212 Query: 218 GIIFQLADDLLDCEED 233 G+ FQLADD+LD D Sbjct: 213 GVAFQLADDVLDIASD 228 >gi|157736647|ref|YP_001489330.1| octaprenyl-diphosphate synthase [Arcobacter butzleri RM4018] gi|157698501|gb|ABV66661.1| octaprenyl-diphosphate synthase [Arcobacter butzleri RM4018] Length = 299 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 106/197 (53%), Gaps = 36/197 (18%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GK +RS L+ + A + + ++++ A +E IH SL+HDD+ +D RRG+P+ Sbjct: 30 LATGKMLRSKLILKIAGI----NEESIKLCAIVEMIHAASLLHDDV--IDEADTRRGQPS 83 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQML 165 V+ YD T+I+ G+ L + AF +S ++ +I + + +LS+ G+M+ Sbjct: 84 VNALYDNKTSIMFGDILYSRAFTELSQMDKRVAYHISNAVTLLSI-----------GEMM 132 Query: 166 DIQDEFIDETQVF---------MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 D+ D TQ F MI K KT +L+ + S AI+ + + E+ +G+N Sbjct: 133 DV-----DLTQSFNTSYTKYLDMIYK-KTASLIEASARSAAILVNLDE---EKYATYGKN 183 Query: 217 LGIIFQLADDLLDCEED 233 LG+ FQ+ DD+LD +D Sbjct: 184 LGLAFQMIDDILDITQD 200 >gi|259486315|tpe|CBF84055.1| TPA: hexaprenyl pyrophosphate synthetase Coq1, putative (AFU_orthologue; AFUA_3G06120) [Aspergillus nidulans FGSC A4] Length = 456 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 90/162 (55%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + +I++ A++AG+ LL A ++ Sbjct: 198 RLAEITELIHTASLLHDDV--IDNALTRRSSNSANIEFGNKMAVLAGDFLLGRASVALA- 254 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187 +L+D ++L+ ++ N+ ++G +DE F D+T + +QK +KT + Sbjct: 255 ---RLRDPEVTELLATVIANL-VEGEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTAS 310 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + A++ H++ + E +G NLG+ FQL DD+LD Sbjct: 311 LISKSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLD 352 >gi|297537721|ref|YP_003673490.1| trans-hexaprenyltranstransferase [Methylotenera sp. 301] gi|297257068|gb|ADI28913.1| Trans-hexaprenyltranstransferase [Methylotenera sp. 301] Length = 332 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 97/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV LF ++ A +E IH +L+HDD+ +D RRG+ T + Sbjct: 53 GGKRLRPILVLLSGGLFGEVKPEHHQLAAVVEFIHTATLLHDDV--VDESSKRRGQNTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + + AF+++ + + N+R +LS N+ +G + Q+L+I Sbjct: 111 AIFGNAASVLVGDFVYSRAFQMMVAVQ-----NMRVMEVLSNATNVIAEGEVL-QLLNIH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + + + KT L A GAI+++AS +++E L +G ++G FQL DD+L Sbjct: 165 NADVTDGAYLQVIHYKTAKLFEAATRLGAIISNASPSDEEALSQYGMHIGTAFQLIDDVL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|291191909|gb|ADD83016.1| PtnT4 [Streptomyces platensis] Length = 348 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 12/188 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK IR+ L A + A+ AA+E +H +SL+HDD+ MD+ RRG+PTV Sbjct: 64 GGKMIRAALTILAAEACGGDAQQAVPGAAAVELVHNFSLLHDDV--MDHDLERRGRPTVW 121 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ AI+AG+ LL A + ++ + + + GQM D+ Sbjct: 122 SKFGTPAAILAGDILLARACGMFDEASGHQGWATKALI-------DAIAELAAGQMADLA 174 Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + + + + KT AL+ AC GA + A R FG +LG+ FQL D Sbjct: 175 LERRATVTLEEALTVSEQKTAALLRCACTLGAGLVGAPDATSRRFGAFGMHLGMAFQLVD 234 Query: 226 DLLDCEED 233 D+L D Sbjct: 235 DVLGIWGD 242 >gi|170740966|ref|YP_001769621.1| polyprenyl synthetase [Methylobacterium sp. 4-46] gi|168195240|gb|ACA17187.1| Polyprenyl synthetase [Methylobacterium sp. 4-46] Length = 345 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 24/242 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQ---------TQHNDRLLSAIRYALL--GGKK 52 G+ L++ S + L+DL+ AS M+ T + ++ + L+ GGK+ Sbjct: 2 GVVIPLEDTSSDPEASLNDLVALVASGMERVNAMILSRTGSDVAMIPEVANHLIASGGKR 61 Query: 53 IRSFLVTECASLFNVNHLTALRVG-----AAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 +R L A L A R G A++E +H +L+HDD+ +D +RRG+ Sbjct: 62 LRPILTLATAQLCGYRAGEAGRDGDVKLAASVEFMHTATLLHDDV--VDESDMRRGRVAA 119 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 I++ +++ G+ LL AF+++ + +R+ +LS + +G + Q+ Sbjct: 120 RIKWGNQASVLVGDFLLGQAFKMMVEVGS-----LRALDILSSAAAVIAEGEVM-QLGAA 173 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 ++ E + + + KT L ACE G ++A ++E R +G NLG+ FQL DD Sbjct: 174 KNTETTEDEYLAVIRAKTAELFAAACEVGPVLAERPKSEAAACRSYGMNLGVAFQLIDDA 233 Query: 228 LD 229 LD Sbjct: 234 LD 235 >gi|152998234|ref|YP_001343069.1| polyprenyl synthetase [Marinomonas sp. MWYL1] gi|150839158|gb|ABR73134.1| Polyprenyl synthetase [Marinomonas sp. MWYL1] Length = 326 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 14/197 (7%) Query: 39 LLSAIRYALL--GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 L+ I Y ++ GGK++R LV A L A+++ IE IH +L+HDD+ Sbjct: 31 LIEQIGYYIISNGGKRLRPLLVLLAAKASAELDKPKLDQAIQMATIIEFIHTSTLLHDDV 90 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + ++ +++ G+ L + AF+I+ + ++ +L+ T Sbjct: 91 --VDESDMRRGKKTANEEWGNAPSVLVGDFLYSRAFQIMVDVGS-----MQCMSVLAKTT 143 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 NI +G + Q+++ D E + + KT L A GA++A AS+ +E LR Sbjct: 144 NIIAEGEVQ-QLINCGDPDTTEESYLKVIQYKTAKLFEGAALCGAVIAGASKEHQEALRQ 202 Query: 213 FGENLGIIFQLADDLLD 229 FG +G FQL DD++D Sbjct: 203 FGMYVGTAFQLIDDVMD 219 >gi|89070187|ref|ZP_01157515.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516] gi|89044203|gb|EAR50354.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516] Length = 332 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%) Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 MQ++H R+ + + GGK++R L A L + + + A +E IH +L+ Sbjct: 32 RMQSEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYDGPYHVHLAATVEFIHTATLL 91 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D RRG+PT ++ +D ++++ G+ L +F ++ I SQ Sbjct: 92 HDDV--VDESAQRRGRPTANLLWDNQSSVLVGDYLFAKSFLLMVDTGNLDVLRILSQASA 149 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 ++ LQ + + L DE + + KT AL A E G ++A Sbjct: 150 TIAEGEVLQ-LTASRSL-----ATDEAVYMKVIRGKTAALFSAATEVGGVIAGQGPEVCR 203 Query: 209 RLRCFGENLGIIFQLADDLLDCE 231 L +G+ LGI FQ+ DDLLD E Sbjct: 204 ALFDYGDALGIAFQIVDDLLDYE 226 >gi|282890377|ref|ZP_06298905.1| hypothetical protein pah_c016o105 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499759|gb|EFB42050.1| hypothetical protein pah_c016o105 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 297 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 12/208 (5%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ A YAL GGK+ R LV A A A+E H SLI DDLP MD Sbjct: 30 KVRDACEYALRNGGKRFRPALVLMVAKTLG-KQADASEAALAVEFFHTASLIADDLPCMD 88 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK----------DNIRSQL 146 N RR P++H + E A++A L+ + ++ LK D++ Sbjct: 89 NDDERRNMPSLHKVFGEDIALLASYALIAEGYRYLAQNSETLKQQQVSFSDRCDHLCVLA 148 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + ++++N GL G GGQ LDI + + + + I KT +L + G + + Sbjct: 149 IQNVSYNTGLFGATGGQFLDIHESNLSLSALRDILHKKTVSLFEISFVLGWLFGGGELEK 208 Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDL 234 ++ + G+ FQ+ADDL D ++DL Sbjct: 209 LPLVKKAASHFGMAFQIADDLSDMQQDL 236 >gi|126733996|ref|ZP_01749743.1| Farnesyltranstransferase [Roseobacter sp. CCS2] gi|126716862|gb|EBA13726.1| Farnesyltranstransferase [Roseobacter sp. CCS2] Length = 332 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 9/200 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A + + + + A +E IH +L+H Sbjct: 33 MASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYDGPYHVHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L +F+++ + +I + + Sbjct: 93 DDV--VDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDILANAAAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + +D ++ + + KT AL A E G +A K+ Sbjct: 151 IAEGEVLQLTAASDLATTEDIYL------QVVRGKTAALFSAAMEVGGEIADQDAATKQA 204 Query: 210 LRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 205 LFDYGDALGISFQIVDDLLD 224 >gi|121610836|ref|YP_998643.1| dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2] gi|121555476|gb|ABM59625.1| Dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2] Length = 342 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ L + A +E IH +L+HDD+ +D +RRG+PT + Sbjct: 63 GGKRLRPALLLMVCGALGYGGAHRLSLAAVVELIHTATLLHDDV--VDASTLRRGRPTAN 120 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++ G+ L T +F+ + N+R +L+ N+ +G + Q++++ Sbjct: 121 EIFGAPACVLVGDFLHTRSFQTMVE-----TGNMRVMEILAEATNVIAEGEVL-QLMNMH 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + KT L + GA++A +S + ++ +G+ LG FQ+ DD+L Sbjct: 175 DATLDEAGYLRVIRSKTAKLFEASARLGAVLARSSPDIEQACATYGQALGTAFQIIDDVL 234 Query: 229 DCEED 233 D + D Sbjct: 235 DYDGD 239 >gi|332981368|ref|YP_004462809.1| polyprenyl synthetase [Mahella australiensis 50-1 BON] gi|332699046|gb|AEE95987.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON] Length = 282 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/232 (34%), Positives = 133/232 (57%), Gaps = 18/232 (7%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 +L+ + ID LD++L ++ H A+RY++ GGK++R L+ LF+ Sbjct: 6 QLKHKIEIIDKNLDNMLPPADTYPPVIH-----EAMRYSVFSGGKRLRPVLLISAYELFD 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + + AIE IH YSLIHDDLP+MD+ RRGK T H + E A++ G+ LL + Sbjct: 61 EHVDDCMPLACAIEFIHTYSLIHDDLPAMDDDDTRRGKATCHKVFGEGIAVLTGDALLNH 120 Query: 127 AFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180 AFE++ L D R+ +++ G+ GM+GGQ++D+ +++ +D+ + I Sbjct: 121 AFEVM------LDDIARNPHHIAAAIAIAKAAGIGGMIGGQVMDLLYENKPVDDGVLQYI 174 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KT AL+C A ++GA+ A A + + +G LG+ FQ++DD+LD +E Sbjct: 175 HQHKTAALICAAVKAGALAAGADEVYVRAIEQYGLALGMAFQISDDILDVDE 226 >gi|90020654|ref|YP_526481.1| phage tail region protein [Saccharophagus degradans 2-40] gi|89950254|gb|ABD80269.1| Trans-hexaprenyltranstransferase [Saccharophagus degradans 2-40] Length = 320 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 12/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N L + A IE IH +L+HDD+ +D +RRG+PT + Sbjct: 41 GGKRLRPLLVLLTARALGYNGNQHLSLSAIIEFIHTATLLHDDV--VDVSALRRGRPTAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + +++ G+ L + AF+++ +K+ L+ T N+ +G + Q+++ Sbjct: 99 ANWGNAPSVLVGDFLYSRAFQMMVEIGEMGIMKE-------LANTTNVISEGEVQ-QLVN 150 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++ + E + KT AL ACE+ AI+A A + +R +G +LG+ FQL DD Sbjct: 151 ARNPEVTEQNYMTVIHKKTAALFEAACETAAILAGADAATCKAVRSYGYHLGVAFQLVDD 210 Query: 227 LLDCEED 233 +LD + D Sbjct: 211 VLDYQGD 217 >gi|223940506|ref|ZP_03632355.1| Polyprenyl synthetase [bacterium Ellin514] gi|223890830|gb|EEF57342.1| Polyprenyl synthetase [bacterium Ellin514] Length = 350 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 24/239 (10%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQ---HNDRLLSAIRYALLG-GKKIRSF 56 + G + K I ++ L A ++ Q + ++ YAL G GK++R Sbjct: 13 VTGASQKETHATWKHIAEPVEPFLEAVAQRLEKQVREFDPAIVPYAEYALTGQGKQLRPA 72 Query: 57 LVTECAS---LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113 LV A+ N +H+T + IE +H +L+HDD+ MD IRRG+ T+ + Sbjct: 73 LVALSANASGTLNDSHVT---IAVIIEMVHLATLVHDDV--MDEAEIRRGRLTLAANWGN 127 Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-- 171 A++ G+ L +A ++ +S T + R+ M + T + G++L Q Sbjct: 128 EIAVLFGDCLFAHALKLAASFPT--PEICRAVAMATNT-------VCSGEILQTQQRRNF 178 Query: 172 -IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + F + +MKT L +C+ GA + A ++ LR FG LG +QL DD LD Sbjct: 179 QFSQPEYFKVLEMKTAELFALSCDLGACLTGAPAVQRNGLRQFGMALGTAYQLYDDCLD 237 >gi|315505424|ref|YP_004084311.1| polyprenyl synthetase [Micromonospora sp. L5] gi|315412043|gb|ADU10160.1| Polyprenyl synthetase [Micromonospora sp. L5] Length = 339 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 24/233 (10%) Query: 12 NSKRIDTILDDLLLQTASHM--------QTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 S R +DDL + + + D+L + +RYALL GK +R + A Sbjct: 5 GSTRYPPFIDDLARSESGRLLRAELGRRWPETPDQLDAIVRYALLPAGKMLRPMMTLHAA 64 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + L E +H +L+HDD+ +D +RRG+P V + Y AI+AG+ Sbjct: 65 EAVGGSPRDVLAAALGTEYLHVATLVHDDI--IDADTLRRGRPAVPVAYSIPGAIVAGDH 122 Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLML------SLTHNIGLQGMLGGQMLDIQDEFIDET 175 L+ +AF+ ++ S + ++ S + L L+ L G LD + E Sbjct: 123 LIFHAFQAMVESGRAVPAASVVSAVTALAEAGQDLCRGQALEARLVGD-LDAGARWYPE- 180 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 MI ++KTG+L C GA++ A L +GE++G FQ+ DDLL Sbjct: 181 ---MI-RLKTGSLFRAVCHIGALLGGADPLVASALARYGEHVGTAFQIRDDLL 229 >gi|91773215|ref|YP_565907.1| polyprenyl synthetase [Methanococcoides burtonii DSM 6242] gi|91712230|gb|ABE52157.1| geranylgeranyl pyrophosphate synthetase [Methanococcoides burtonii DSM 6242] Length = 300 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 18/193 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKK+R ++ + + AIE IH SLIHDD+ +D G +RRG + H Sbjct: 40 GGKKVRPIILLLASRICGKGSENCTNAALAIELIHSASLIHDDI--LDEGVMRRGVESAH 97 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--MLGGQMLD 166 ++ A++AG+ +++ + E+IS T + G G M G+ +D Sbjct: 98 KKFGPAAAMLAGDYMISKSIELISIYST------------PVVQEFGRAGMAMAEGETID 145 Query: 167 IQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 I+ E E F KT +L + GA +A A + +L+ +G LG +Q+ Sbjct: 146 IKSTSEDFAEMNYFDCIDKKTASLFAASAVMGAYIAGADEKTASKLKNYGRKLGRAYQIV 205 Query: 225 DDLLDCEEDLPKK 237 DDLL+ +++ K Sbjct: 206 DDLLEYTQNIDNK 218 >gi|315635812|ref|ZP_07891074.1| polyprenyl synthetase [Arcobacter butzleri JV22] gi|315479791|gb|EFU70462.1| polyprenyl synthetase [Arcobacter butzleri JV22] Length = 299 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 106/197 (53%), Gaps = 36/197 (18%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GK +RS L+ + A + + ++++ A +E IH SL+HDD+ +D RRG+P+ Sbjct: 30 LATGKMLRSKLILKIAGI----NEESIKLCAIVEMIHAASLLHDDV--IDEADTRRGQPS 83 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQML 165 V+ YD T+I+ G+ L + AF +S ++ +I + + +LS+ G+M+ Sbjct: 84 VNALYDNKTSIMFGDILYSRAFTELSQMDKRVAYHISNAVTLLSI-----------GEMM 132 Query: 166 DIQDEFIDETQVF---------MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 D+ D TQ F MI K KT +L+ + S AI+ + + E+ +G+N Sbjct: 133 DV-----DLTQSFNTSYTKYLDMIYK-KTASLIEASARSAAILVNLDE---EKYATYGKN 183 Query: 217 LGIIFQLADDLLDCEED 233 LG+ FQ+ DD+LD +D Sbjct: 184 LGLAFQMIDDILDITQD 200 >gi|316935308|ref|YP_004110290.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1] gi|315603022|gb|ADU45557.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1] Length = 288 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 20/193 (10%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 RL +A+R A+ G ++R L A + N GAA+E +HC SLIHDDLP Sbjct: 26 RLAAAMRGAVFPRGARVRPRLCHSVALACGEDNPGITEAAGAALELMHCASLIHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D +RRG+P+VH + E A++AG+ ++ AF+ I+ + + + +L LT IG Sbjct: 86 DGADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQTIA------RVDGPADRLLKLTQIIG 139 Query: 156 LQ-----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G++ GQ + + E + + KTGAL A A ++ ++ E Sbjct: 140 SAVGVPFGIVAGQAWECESEI----NLAHYHRSKTGALFVAATAM---GAASAGSDPEPW 192 Query: 211 RCFGENLGIIFQL 223 R GE +G +Q+ Sbjct: 193 RMVGEKIGEAYQV 205 >gi|328906289|gb|EGG26064.1| heptaprenyl diphosphate synthase component II [Propionibacterium sp. P08] Length = 324 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 14/185 (7%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R LV C+ + +R +E H SL HDD+ MD RRG P+ Sbjct: 46 GGKRFRPLLVVLCSQFGHEADEADLVRAAVVVELTHVASLYHDDV--MDEASKRRGAPSA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++++ AI+ G+ Y F S +L D +R Q + T + +QG + Sbjct: 104 NLRWGNSVAIMVGD----YLFSKASLAVAELGVDFVRLQ---ARTFSRLVQGQIAETRGP 156 Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E D ++ + KTG+L+ + GA+++HAS L FGE++G +FQLAD Sbjct: 157 SQGE--DPLAHYLKVVADKTGSLIATSAVFGAMVSHASAENVTALEQFGEDIGEVFQLAD 214 Query: 226 DLLDC 230 DL+D Sbjct: 215 DLIDV 219 >gi|16079331|ref|NP_390155.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|399776|sp|P31114|HEPS2_BACSU RecName: Full=Heptaprenyl diphosphate synthase component 2; Short=HEPPP synthase subunit 2; AltName: Full=Spore germination protein C3 gi|143803|gb|AAA20856.1| GerC3 [Bacillus subtilis] gi|2634692|emb|CAB14190.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|124494285|gb|ABN13180.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|124494305|gb|ABN13199.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494385|gb|ABN13275.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494445|gb|ABN13332.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. SMY] Length = 348 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+IR V +++N + V +E IH SL+HDD+ +D+ +RRGKPT Sbjct: 71 GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 126 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++D A+ G+ +L + E+++ I SQ ++ + G++ Sbjct: 127 IKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQ 177 Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+D++ E + ++ + K KT L+ +C+ GAI + A + + L FG +G+ +Q+ Sbjct: 178 IKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 237 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE+L K Sbjct: 238 IDDILDFTSTEEELGK 253 >gi|118580423|ref|YP_901673.1| trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379] gi|118503133|gb|ABK99615.1| Trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379] Length = 322 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A L + A+ + + IE IH +L+HDD+ +D+ +RRG + + Sbjct: 41 GGKRVRPALLLLAARLCDYQGDKAVPLASVIEFIHTATLLHDDV--VDSATLRRGLASAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F ++ + + + S + +Q + G++ + Sbjct: 99 TLWGNEASVLVGDFLFSKSFSLMVAVGSLDILKVLSDATTVIAEGEVMQLLCTGELELTE 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + +ID + + KT LM ACE+GAI+ A+ ++ L FG NLGI FQL DD L Sbjct: 159 ERYID------VVRSKTAILMSAACEAGAILGGAAPERRQALSDFGMNLGIAFQLMDDTL 212 Query: 229 D---CEEDLPK 236 D EE+ K Sbjct: 213 DYIATEEEFGK 223 >gi|225174192|ref|ZP_03728191.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] gi|225169977|gb|EEG78772.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] Length = 324 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V C S + + + AIE IH SL+HDD+ +D+ RRG PTV Sbjct: 45 GGKRLRPAMVLLCGSFYASPQTELVDMATAIELIHTASLVHDDV--IDHAASRRGHPTVS 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ + A++ G+ L AF +++ + + ++ ++T I L M G++ Sbjct: 103 AKWGDHQAVLYGDFLFARAFSLLTK-------HGQVGVLENMTRAISL--MCEGEIEQAA 153 Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 F + E KT + C +GA EK+ L FG LG FQ+ D Sbjct: 154 SRFNPNVTEADYISYIHKKTAYFISACCLAGAEACDMPPAEKKALATFGLQLGYAFQMID 213 Query: 226 DLLD 229 DLLD Sbjct: 214 DLLD 217 >gi|124494465|gb|ABN13351.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494485|gb|ABN13370.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494505|gb|ABN13389.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494525|gb|ABN13408.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] Length = 348 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 103/195 (52%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V + +F + ++ V +E IH SL+HDD+ +D+ +RRGKPT+ Sbjct: 71 GGKRIRPVFVL-LSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTI 127 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++D A+ G+ +L + E+++ I SQ ++ + G++ I Sbjct: 128 KAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQI 178 Query: 168 QDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ E + ++ + K KT L+ +C+ GAI + A + + L FG +G+ +Q+ Sbjct: 179 KDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQII 238 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE+L K Sbjct: 239 DDILDFTSTEEELGK 253 >gi|323966367|gb|EGB61801.1| polyprenyl synthetase [Escherichia coli M863] gi|327251278|gb|EGE62967.1| polyprenyl synthetase family protein [Escherichia coli STEC_7v] Length = 323 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A S E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCSPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|229553018|ref|ZP_04441743.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus LMS2-1] gi|229313640|gb|EEN79613.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus LMS2-1] Length = 312 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 13/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +RS L+ A ++ + GAAIE +H +L+HDD+ +D+ IRRG TV Sbjct: 35 GGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVS 92 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + AI AG+ L F+++S P+T L+ N R +M + Q ++ Sbjct: 93 AESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNAR--IMKRIFMGEVDQNGPSAPLI 150 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + ++ KT AL A +GA + H S +K+ FG LG+ FQ+ D Sbjct: 151 PTVNAYLSAI------SGKTAALFALATYTGATIGHLSATQKKAAYRFGRQLGMAFQMID 204 Query: 226 DLLDCEE 232 DLLD + Sbjct: 205 DLLDYTQ 211 >gi|257056312|ref|YP_003134144.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] gi|256586184|gb|ACU97317.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] Length = 335 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 14/183 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A +AL A+E +H +SL+HDD+ MD RR +PT Sbjct: 53 GGKALRPALALLAARAVGAPPESALPGAVAVELVHNFSLLHDDV--MDGDTERRHRPTAW 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+AG+ LLT A E++ S + + +Q + + H ++ GQ DI+ Sbjct: 111 RLFGTPAAILAGDALLTLAMEVLDS----VGERSANQRLAAAVHR-----LIEGQSADIE 161 Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + + ++ KT +LM + E GA++ A L FG NLG+ FQL D Sbjct: 162 YESRTIVSVEECLDMEDGKTASLMACSAELGALLGGADDRTVAALGDFGRNLGMGFQLVD 221 Query: 226 DLL 228 DLL Sbjct: 222 DLL 224 >gi|52425655|ref|YP_088792.1| IspA protein [Mannheimia succiniciproducens MBEL55E] gi|52307707|gb|AAU38207.1| IspA protein [Mannheimia succiniciproducens MBEL55E] Length = 358 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + A IE +H +L+HDD+ +D +RRG PT + Sbjct: 78 GGKRIRPMIANLAAKALNYQDNKHITCAAFIEFLHTATLLHDDV--VDESDMRRGNPTAN 135 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T +F+++ T+L ++R ++S N+ +G + Q+++++ Sbjct: 136 AEFGNAASVLVGDYMHTRSFQMM----TELG-SLRILQVMSAATNVIAEGEVQ-QLMNVR 189 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L + ++ AI+A A +E L+ +G LG FQL DD+L Sbjct: 190 DPDTTEQNYMKVIYSKTARLFEVSTQTVAILADAGAAIEEGLQNYGRYLGTAFQLVDDIL 249 Query: 229 D 229 D Sbjct: 250 D 250 >gi|85058340|ref|YP_454042.1| octaprenyl diphosphate synthase [Sodalis glossinidius str. 'morsitans'] gi|84778860|dbj|BAE73637.1| octaprenyl-diphosphate synthase [Sodalis glossinidius str. 'morsitans'] Length = 323 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALHYQGKQHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF+++++ ++ +R ++S NI +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTALES-----LRVLELMSEAVNIIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I + KT L A +S AI+A A ++ LR +G LG FQL DDLL Sbjct: 155 DPDITIDNYMRVIYSKTARLFEAASQSSAILAGADACQEAALRDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYGAD 219 >gi|192290105|ref|YP_001990710.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] gi|192283854|gb|ACF00235.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] Length = 288 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 20/193 (10%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 RL +A+R A+ G ++R L A + N GAA+E +HC SLIHDDLP Sbjct: 26 RLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPGITEAAGAALELMHCASLIHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D +RRG+P+VH + E A++AG+ ++ AF+ I+ + + +L LT IG Sbjct: 86 DGADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQTIARAEGP------ADRLLKLTQIIG 139 Query: 156 LQ-----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G++ GQ + + E + + KTGAL A A ++ ++ E Sbjct: 140 GAVGVPFGIVAGQAWECETEI----NLAHYHRSKTGALFVAATAM---GAASAGSDPEPW 192 Query: 211 RCFGENLGIIFQL 223 R GE +G +Q+ Sbjct: 193 RMVGEKIGEAYQV 205 >gi|300309704|ref|YP_003773796.1| octaprenyldiphosphate synthase [Herbaspirillum seropedicae SmR1] gi|300072489|gb|ADJ61888.1| octaprenyldiphosphate synthase protein [Herbaspirillum seropedicae SmR1] Length = 309 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A+ F + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 30 GGKRLRPVLVVLIANAFGYKGEHHHSLAAVIEFIHTATLLHDDV--VDESSLRRGKQTAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ + N R +++ N+ +G + Q+L++ Sbjct: 88 AMFGNAASVLVGDFLYSRAFQMMVA-----VGNPRVMEIVADATNVIAEGEVL-QLLNMH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + +DE + + KT L A + GA++A A + E +G ++G FQL DD+L Sbjct: 142 NPDVDENGYLQVIRSKTAKLFEAASQIGALIAGADEAGIEAAAEYGRSIGTAFQLIDDVL 201 Query: 229 D 229 D Sbjct: 202 D 202 >gi|145632254|ref|ZP_01787989.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655] gi|144987161|gb|EDJ93691.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655] Length = 323 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 97/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL ++++ +++ N+ +G + Q++++ Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D ET + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 155 DPETSETNYMRVIYSKTARLFEVAGQAAAIVAGGTEVQEKALQDYGRYLGTAFQLVDDVL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|258540369|ref|YP_003174868.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus Lc 705] gi|257152045|emb|CAR91017.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus Lc 705] Length = 322 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 13/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +RS L+ A ++ + GAAIE +H +L+HDD+ +D+ IRRG TV Sbjct: 45 GGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVS 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + AI AG+ L F+++S P+T L+ N R +M + Q ++ Sbjct: 103 AESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNAR--IMKRIFMGEVDQNGPSAPLI 160 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + ++ KT AL A +GA + H S +K+ FG LG+ FQ+ D Sbjct: 161 PTVNAYLSAI------SGKTAALFALATYTGATIGHLSATQKKAAYRFGRQLGMAFQMID 214 Query: 226 DLLDCEE 232 DLLD + Sbjct: 215 DLLDYTQ 221 >gi|313893153|ref|ZP_07826730.1| polyprenyl synthetase [Veillonella sp. oral taxon 158 str. F0412] gi|313442506|gb|EFR60921.1| polyprenyl synthetase [Veillonella sp. oral taxon 158 str. F0412] Length = 323 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 14/187 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R+ L A+ +R+ A+E +H +LIHDD+ +D IRRG+ T+H Sbjct: 46 GGKRLRAQLCLLIANAGTSVERQRIRIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI++G+ L AF+I+S I S ++ L G+ + ++ Sbjct: 104 MHKGNKVAILSGDYLFAKAFQIVSEMPNMKYLQIFSHIITCLVE---------GEFMQME 154 Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + ID+ + +M + K A C E G ++ S++E L+ +G LG+ FQ+ D Sbjct: 155 DVYRIDQGIERYMTKTQKKTADFMEGCMELGGLLGGWSESEIVELKKYGHALGMAFQITD 214 Query: 226 DLLDCEE 232 D++D E Sbjct: 215 DIMDYRE 221 >gi|124494325|gb|ABN13218.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494345|gb|ABN13237.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii str. W23] gi|124494365|gb|ABN13256.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494405|gb|ABN13294.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] Length = 348 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 103/195 (52%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V + +F + ++ V +E IH SL+HDD+ +D+ +RRGKPT+ Sbjct: 71 GGKRIRPVFVL-LSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTI 127 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++D A+ G+ +L + E+++ I SQ ++ + G++ I Sbjct: 128 KAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQI 178 Query: 168 QDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ E + ++ + K KT L+ +C+ GAI + A + + L FG +G+ +Q+ Sbjct: 179 KDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQII 238 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE+L K Sbjct: 239 DDILDFTSTEEELGK 253 >gi|227497907|ref|ZP_03928087.1| possible trans-hexaprenyltranstransferase [Actinomyces urogenitalis DSM 15434] gi|226832673|gb|EEH65056.1| possible trans-hexaprenyltranstransferase [Actinomyces urogenitalis DSM 15434] Length = 368 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 22/193 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L A L + T +V G A+E H +L HDD+ MD+ +RRG P Sbjct: 49 GGKRLRPVLTLLTAQLGDPQTATGEKVRDAGVAVELTHIATLYHDDV--MDDAPLRRGAP 106 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + + AI+ G+ L+ A +++++ P+ L H + + GQ Sbjct: 107 SAQTVWGNSAAILTGDVLVARASQLVAALGPEA------------VLAHAKTFERLCMGQ 154 Query: 164 MLDIQDEFIDETQV-FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + + + V IQ + KTG+L+ + GA++ A + + + FGE +G+ Sbjct: 155 LHETLPRPVGTDPVAHYIQVLADKTGSLIAVSARYGAMLTEAGEETERIVEEFGEKIGVA 214 Query: 221 FQLADDLLDCEED 233 FQLADD++D D Sbjct: 215 FQLADDVIDLTSD 227 >gi|226329701|ref|ZP_03805219.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198] gi|225202887|gb|EEG85241.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198] Length = 323 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLTGRALDYQGDKHISVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTD-----LDSMRVLKLMSSATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI++ A+ +++ + +G LG FQL DDLL Sbjct: 155 DPDISEDDYMQVIYSKTARLFEAASHASAILSGATPEQEKAFQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|67524619|ref|XP_660371.1| hypothetical protein AN2767.2 [Aspergillus nidulans FGSC A4] gi|40744019|gb|EAA63201.1| hypothetical protein AN2767.2 [Aspergillus nidulans FGSC A4] Length = 1092 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 90/162 (55%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + +I++ A++AG+ LL A ++ Sbjct: 827 RLAEITELIHTASLLHDDV--IDNALTRRSSNSANIEFGNKMAVLAGDFLLGRASVALA- 883 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187 +L+D ++L+ ++ N+ ++G +DE F D+T + +QK +KT + Sbjct: 884 ---RLRDPEVTELLATVIANL-VEGEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTAS 939 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + A++ H++ + E +G NLG+ FQL DD+LD Sbjct: 940 LISKSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLD 981 >gi|319760237|ref|YP_004124175.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str. BVAF] gi|318038951|gb|ADV33501.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str. BVAF] Length = 324 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 8/183 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKKIRS +V A + + IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKKIRSSMVLLIAKSLTYKKNQHVIIATLIEFIHAATLLHDDV--VDTSEMRRGKITAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + +++ G+ + T AF++++ ++ +R +++ NI +G + Q++ Sbjct: 101 IMFGNAASVLVGDFIYTRAFQMMTELQS-----LRILSLMANAVNIIAEGEIM-QLIHCH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I I KT L A ++ AI+A+A +++ L +G+ +GI FQL DD+L Sbjct: 155 DPTITINHYMKIIYNKTARLFEVASQTSAILANADIKQEQALGNYGKYIGIAFQLIDDVL 214 Query: 229 DCE 231 D + Sbjct: 215 DYD 217 >gi|238022826|ref|ZP_04603252.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147] gi|237866029|gb|EEP67165.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147] Length = 324 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPILTILAGKCLGCDSDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + ++ +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----LKILEVMAEATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I ET+ + + KT L A + GAI+A A+ +++ L+ +G ++G FQ+ DD+L Sbjct: 157 NTEISETEYLQVIQYKTAKLFEAAAQVGAILAGATSGQEQALKDYGAHIGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|221310190|ref|ZP_03592037.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|221314513|ref|ZP_03596318.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319435|ref|ZP_03600729.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. JH642] gi|221323711|ref|ZP_03605005.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. SMY] gi|321311744|ref|YP_004204031.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis BSn5] gi|291484698|dbj|BAI85773.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. natto BEST195] gi|320018018|gb|ADV93004.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis BSn5] Length = 320 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+IR V +++N + V +E IH SL+HDD+ +D+ +RRGKPT Sbjct: 43 GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 98 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++D A+ G+ +L + E+++ I SQ ++ + G++ Sbjct: 99 IKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQ 149 Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+D++ E + ++ + K KT L+ +C+ GAI + A + + L FG +G+ +Q+ Sbjct: 150 IKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 209 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE+L K Sbjct: 210 IDDILDFTSTEEELGK 225 >gi|152978590|ref|YP_001344219.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z] gi|150840313|gb|ABR74284.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z] Length = 330 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 50 GGKRIRPMIALLAARALNYEGEKMPVCAAFIEFIHTASLLHDDV--VDESDMRRGRATAN 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++ ++++ ++S N+ +G + Q++++ Sbjct: 108 AAFGNAASVLVGDFIYTRAFQLMAK-----LNSLKMLTIMSDATNVLAEGEVQ-QLMNVN 161 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L + ++ AIMA+A + + L+ +G LG FQL DD+L Sbjct: 162 DPETTEENYMKVIYRKTARLFEVSTQAAAIMANADEKIESALQQYGRYLGTAFQLVDDVL 221 Query: 229 D 229 D Sbjct: 222 D 222 >gi|296332988|ref|ZP_06875445.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674908|ref|YP_003866580.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii str. W23] gi|296149839|gb|EFG90731.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413152|gb|ADM38271.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii str. W23] Length = 320 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+IR V +++N + V +E IH SL+HDD+ +D+ +RRGKPT Sbjct: 43 GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 98 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++D A+ G+ +L + E+++ I SQ ++ + G++ Sbjct: 99 IKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQ 149 Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+D++ E + ++ + K KT L+ +C+ GAI + A + + L FG +G+ +Q+ Sbjct: 150 IKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 209 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE+L K Sbjct: 210 IDDILDFTSTEEELGK 225 >gi|282880585|ref|ZP_06289292.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1] gi|281305688|gb|EFA97741.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1] Length = 325 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 14/186 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R L+ A F A +E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKRMRPMLILLIAKNFGGVTSIAQHAAVGLELLHTASLVHDDV--VDESGERRGQASVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166 YD A++ G+ +L+ A +S S+ ++ N+G + + G++L + Sbjct: 103 TYDNKVAVLVGDYILSTALLQVSFT--------HSEAIIQNLANLG-RTLSNGEILQLSN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 IQ++ I E + + K KT AL GA A+ E E R FG+ LGIIFQ+ DD Sbjct: 154 IQNQDISEEVYYQVIKQKTAALFESCAVIGAQAGKATPEEVEAARQFGQTLGIIFQIRDD 213 Query: 227 LLDCEE 232 + D E Sbjct: 214 IFDYFE 219 >gi|307543898|ref|YP_003896377.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581] gi|307215922|emb|CBV41192.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581] Length = 333 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 12/233 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALL--GGKKIRSFLVTE 60 +P++L I ++ + +QTQ R L+ AI ++ GGK++R LV Sbjct: 6 VPTQLTTPDTPIHAVVAEDFAAVNRTIQTQLASRIPLVEAIGQYIVDSGGKRMRPLLVLL 65 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + + IE +H +L+HDD+ +D ++RRG+ T + + +++ G Sbjct: 66 AARSLGYEGDQHVALATLIEFMHTSTLLHDDV--VDESHMRRGRATANDAWGNAPSVLVG 123 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + L + +F+++ ++R +LS +G + Q+ ++ + +DE F Sbjct: 124 DFLYSRSFQMMVG-----VGSMRIMEILSAATCTIAEGEVQ-QLTNVGNPDVDEAAYFET 177 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT L A GAI+A A+ ++ L+ +G LG+ FQL DDLLD D Sbjct: 178 IQGKTAMLFEAASHCGAIIADATPEQEAALQAYGRYLGLAFQLVDDLLDYRGD 230 >gi|218550470|ref|YP_002384261.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469] gi|218358011|emb|CAQ90657.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469] gi|324115209|gb|EGC09173.1| polyprenyl synthetase [Escherichia fergusonii B253] gi|325498768|gb|EGC96627.1| octaprenyl diphosphate synthase [Escherichia fergusonii ECD227] Length = 323 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPNITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEQGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|220924250|ref|YP_002499552.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060] gi|219948857|gb|ACL59249.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060] Length = 345 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 13/186 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVG-----AAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK++R L A L R G A++E +H +L+HDD+ +D +RRG Sbjct: 58 GGKRLRPILTLATAQLCGYRSAEGGRDGDVKLAASVEFMHTATLLHDDV--VDESDMRRG 115 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + I++ +++ G+ LL AF+++ + +R+ +LS + +G + Q Sbjct: 116 RVAARIKWGNQASVLVGDFLLGQAFKMMVEVGS-----LRALDILSSAAAVIAEGEVM-Q 169 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + ++ E + + + KT L ACE G ++A ++E R +G NLGI FQL Sbjct: 170 LGAAKNTETTEDEYLAVIRAKTAELFAAACEVGPVLAERPKSEAAACRSYGMNLGIAFQL 229 Query: 224 ADDLLD 229 DD LD Sbjct: 230 VDDALD 235 >gi|2829443|sp|P55785|HEPS2_BACST RecName: Full=Heptaprenyl diphosphate synthase component 2; Short=HEPPP synthase subunit 2 gi|1731683|dbj|BAA08725.1| component II of heptaprenyl diphosphate synthase [Geobacillus stearothermophilus] Length = 320 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 17/194 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A + V A+E IH SL+HDD+ +D+ +RRG+PT+ Sbjct: 43 GGKRIRPVFVLLAARFGQYDLERMKHVAVALELIHMASLVHDDV--IDDADLRRGRPTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A+ G+ L + E ++ N R+ +L+ T + + G++ I+ Sbjct: 101 AKWSNRFAMYTGDYLFARSLERMAE-----LGNPRAHQVLAKT----IVEVCRGEIEQIK 151 Query: 169 DEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ D+ ++++ KT L+ +C+ GA+ A A + +RL FG +G+ FQ+ D Sbjct: 152 DKYRFDQPLRTYLRRIRRKTALLIAASCQLGALAAGAPEPIVKRLYWFGHYVGMSFQITD 211 Query: 226 DLLD---CEEDLPK 236 D+LD EE L K Sbjct: 212 DILDFTGTEEQLGK 225 >gi|313836214|gb|EFS73928.1| polyprenyl synthetase [Propionibacterium acnes HL037PA2] gi|314927649|gb|EFS91480.1| polyprenyl synthetase [Propionibacterium acnes HL044PA1] gi|314971352|gb|EFT15450.1| polyprenyl synthetase [Propionibacterium acnes HL037PA3] Length = 365 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 14/185 (7%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R LV C+ + +R +E H SL HDD+ MD RRG P+ Sbjct: 87 GGKRFRPLLVVLCSQFGHEADEADLVRAAVVVELTHVASLYHDDV--MDEASKRRGAPSA 144 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++++ AI+ G+ Y F S +L D +R Q + T + +QG + Sbjct: 145 NLRWGNSVAIMVGD----YLFSKASLAVAELGVDFVRLQ---ARTFSRLVQGQIAETRGP 197 Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E D ++ + KTG+L+ + GA+++HAS L FGE++G +FQLAD Sbjct: 198 SQGE--DPLAHYLKVVADKTGSLIATSAVFGAMVSHASAENVTALEQFGEDIGEVFQLAD 255 Query: 226 DLLDC 230 DL+D Sbjct: 256 DLIDV 260 >gi|320006972|gb|ADW01822.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331] Length = 392 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 114/259 (44%), Gaps = 40/259 (15%) Query: 5 LPSKLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTE 60 +P + + +D +L + L L A D + S + + L GGK++R+ V Sbjct: 26 VPGTVGGTAAAVDAVLAEHLRTRLGEARRTDAVFADEVASRVAAFVLQGGKRLRTAFV-R 84 Query: 61 CASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ------- 110 C L + + T LRVGAA+E + +L+HDD+ MD +RRG P VH Q Sbjct: 85 CGWLAAGGSGDPGTPLRVGAALELLQACALVHDDV--MDESPVRRGAPAVHAQFARLHRE 142 Query: 111 ---------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 Y A++AG+ L +A ++++ +T L L G M+ Sbjct: 143 GRMRGSATSYSATAAVLAGDLALVWADDLLT--ETALSSPYGGHLHREWQAMRGE--MVA 198 Query: 162 GQMLDIQDEFI---DETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFG 214 GQ LD++ + DETQ I +K+ + E GA +A A + LR G Sbjct: 199 GQYLDMRAQATGSSDETQARNIATLKS---ALYTVERPLALGACLAGAGAPVMDALRSAG 255 Query: 215 ENLGIIFQLADDLLDCEED 233 G+ FQL DDLL D Sbjct: 256 RCAGLAFQLHDDLLGAFGD 274 >gi|253576413|ref|ZP_04853743.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844306|gb|EES72324.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 324 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 28/212 (13%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 DDLL +T+ H LL A GGK++R V N + + +E Sbjct: 29 DDLLSETSLH--------LLKA------GGKRLRPVFVLLGGKFGNYDLQKLQYIAVPLE 74 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH SL+HDD+ +D+ RRGK TV ++D A+ G+ + A +S Sbjct: 75 LIHSASLVHDDV--IDDADTRRGKATVKSKWDNRIAMYTGDYIYAKALMQVSELANPYIH 132 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQ-KMKTGALMCFACESGA 197 I ++ M+ ++ G+M I+D F E V ++++ + KT L+ +C+ GA Sbjct: 133 RILAKAMVQMSI---------GEMEQIRDFFNTEQSVRNYLLRIRRKTALLIAISCQLGA 183 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A A L +G N+G+ FQ+ DDLLD Sbjct: 184 MAADAPAKVSALLYRYGYNVGMAFQIRDDLLD 215 >gi|312962998|ref|ZP_07777484.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6] gi|311282767|gb|EFQ61362.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6] Length = 322 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ + I SQ + LQ + ++ Sbjct: 101 AMWGNAPSVLVGDFLYSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQ------LSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + AS + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCGASAEQAEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|297183903|gb|ADI20025.1| geranylgeranyl pyrophosphate synthase [uncultured gamma proteobacterium EB000_65A11] Length = 321 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 8/183 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N + + IE +H L+HDD+ +D +RRG+ TV+ Sbjct: 42 GGKRLRPLLVLLAARACNYQQHQHINLATIIEFLHTAMLLHDDV--VDESDLRRGRKTVN 99 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AFE++ ++ D +R +LS N +G + Q+ +I+ Sbjct: 100 AAWGNPASVLVGDFLHSRAFEMM----VEIGD-LRVMEILSHATNTIAEGEVQ-QLGNIR 153 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + KT L A SGA++A AS ++ L+ +G +LG+ FQL DD+L Sbjct: 154 NPDATEQSYIEVINRKTAMLFEAASHSGAVLAGASPEQELSLQQYGCHLGVAFQLIDDIL 213 Query: 229 DCE 231 D E Sbjct: 214 DYE 216 >gi|294339015|emb|CAZ87362.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Thiomonas sp. 3As] Length = 336 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 57 GGKRLRPALLLLVSQALGFRGPQQHIMAAVVELIHTATLLHDDV--VDESSMRRGRETSN 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ S ++R +L+ N+ +G + Q+L++ Sbjct: 115 ALFGNSASVLVGDFLYSRAFQMMVS-----VGSMRILDILADATNVIAEGEVL-QLLNMH 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A GA++A A N +E + G + G FQL DDLL Sbjct: 169 DPEVDEQRYLQVIRFKTAKLFEAAARIGAVLADADANTQEEMALAGRSFGTAFQLIDDLL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|242242749|ref|ZP_04797194.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis W23144] gi|242233885|gb|EES36197.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis W23144] Length = 332 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 18/201 (8%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91 +D+ L + LL GGK++R V + N + RV A+E IH +L+HDD Sbjct: 37 SDQTLQDASFHLLSSGGKRVRPAFVILSGQFGSNNKPSEDTYRVAVALELIHMATLVHDD 96 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D RRG+ T+ ++D+ TAI+ GN LL + +S S + T Sbjct: 97 V--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKYLSEI---------SDTRVHTT 145 Query: 152 HNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKE 208 + + + G++ QD+F ++T ++++ KT L+ + + GAI ++AS + Sbjct: 146 ISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSNASNDVIR 205 Query: 209 RLRCFGENLGIIFQLADDLLD 229 +L+ G +G+ FQ+ DD+LD Sbjct: 206 KLKMIGHYIGMSFQIIDDVLD 226 >gi|330841866|ref|XP_003292910.1| hypothetical protein DICPUDRAFT_157686 [Dictyostelium purpureum] gi|325076811|gb|EGC30569.1| hypothetical protein DICPUDRAFT_157686 [Dictyostelium purpureum] Length = 465 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 108/205 (52%), Gaps = 14/205 (6%) Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCY 85 A ++ + + L+S +Y L GK+IR +V + + N T +++ +E IH Sbjct: 168 APYLSKKTSPVLVSMSKYYFELKGKRIRPTIVLLLSKALSANVQKTQIKLAEVVEMIHTA 227 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SL+HDD+ +D RR +++ Y AI+ G+ LL A I+S+ ++++ ++ Sbjct: 228 SLVHDDV--IDEASTRRDVLSINQSYSNKLAILCGDFLLARASLILST----IRNSDVTE 281 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMAHASQ 204 M ++ L ++ G+ + + + ++ + +KTG+L+ +C S AI++ A Q Sbjct: 282 CM-----SLALAELVEGEFMQAKSSGVSSFDHYLKKTYLKTGSLITNSCRSAAILSGADQ 336 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 N FG+NLG+ FQ+ DDLLD Sbjct: 337 NIVNISTEFGKNLGLAFQIIDDLLD 361 >gi|288960115|ref|YP_003450455.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510] gi|288912423|dbj|BAI73911.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510] Length = 342 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 19/230 (8%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIR-------YALL-GGKKIRSFLVT 59 E +R + LDDL A + + DR+ S + Y + GGK++R L Sbjct: 12 EPKRRKSSPLDDLTALVAEDLSAVNQIILDRMQSQVEMIPQLAGYLIAAGGKRLRPVLTL 71 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A+L + A +E IH +L+HDD+ +D +RRG + + + +++ Sbjct: 72 AAANLCGYQGEHHRLLAAVVEFIHSATLLHDDV--VDESDLRRGMASANAVFGNKASVLV 129 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + AFE++ + Q D +R +LS I +G + Q+ D E Sbjct: 130 GDFLFSRAFEMMV--EVQSLDVLR---ILSGASAIIAEGEVL-QLRTTNDTETSEQAYLE 183 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + K KT L AC GA++A+ Q E+ L +G NLGI FQL DD+LD Sbjct: 184 VIKGKTAELFAAACRVGAVVANRPQAEELALYDYGMNLGIAFQLVDDVLD 233 >gi|260220330|emb|CBA27759.1| hypothetical protein Csp_A03890 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 524 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ C + A +E IH +L+HDD+ +D+ +RRG PT + Sbjct: 48 GGKRLRPALLLLCCGALGYKGEQRFNMAAVVEFIHTATLLHDDV--VDDSDLRRGAPTAN 105 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ L + AF+++ ++ +R +L+ NI +G + Q++++ Sbjct: 106 ARFGNPASVLVGDFLYSRAFQMMVDAQS-----MRIMQVLADATNIISEGEVM-QLMNMH 159 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + +DE + + KT L + GAI++ AS+ +E FG+ +G FQ+ DD+L Sbjct: 160 NAALDEAGYLQVIRSKTAKLFEASARVGAILSQASETHEEACAEFGQAMGTAFQVIDDVL 219 Query: 229 DCEED 233 D D Sbjct: 220 DYAGD 224 >gi|294675118|ref|YP_003575734.1| polyprenyl synthetase family protein [Prevotella ruminicola 23] gi|294472825|gb|ADE82214.1| polyprenyl synthetase family protein [Prevotella ruminicola 23] Length = 324 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R LV A N+ ++ + AA+ E +H SL+HDD+ +D RRG+P+ Sbjct: 44 GGKRMRPMLVFLTAR--NLGEISDVTQNAALGLELLHTASLVHDDV--VDESSERRGQPS 99 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQML 165 V+ Y+ A++ G+ +L+ A + L DN R Q + L + +L Q+ Sbjct: 100 VNAAYNNKVAVLVGDYILSTAL-----LRVALSDNHRIVQHLAELGRKLAAGEVL--QLS 152 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +I ++ I E + + KT L C GAI AS+ E+ FG N+G+IFQ+ D Sbjct: 153 NISNQDISEDVYYQVIDQKTAVLFESCCILGAISVGASEEMIEKAAKFGHNVGMIFQIRD 212 Query: 226 DLLD 229 D+ D Sbjct: 213 DIFD 216 >gi|119775962|ref|YP_928702.1| trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B] gi|119768462|gb|ABM01033.1| Trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B] Length = 333 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A N N L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPLLSVLAARAVNYNGEGHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L Q++ T+ + +L Q+++ Sbjct: 111 ALFGNSASVLVGDFLYTRSFQMM----TELGSMKVLQVLADATNVLAEGEVL--QLMNCN 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++A + + +E L +G+ LG FQL DDLL Sbjct: 165 DPNTTEESYMRVIYCKTAKLFEAATRLAAVLAGSDEKVEEALADYGKYLGTAFQLIDDLL 224 Query: 229 DCEED 233 D D Sbjct: 225 DYTSD 229 >gi|78223658|ref|YP_385405.1| polyprenyl synthetase [Geobacter metallireducens GS-15] gi|78194913|gb|ABB32680.1| Polyprenyl synthetase [Geobacter metallireducens GS-15] Length = 322 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L+ A L + + + IE IH +L+HDD+ +DN +RRG + + Sbjct: 41 GGKRIRPTLLLLAAKLCGYTGDRHVPLASVIEFIHTATLLHDDV--VDNATLRRGNASAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F ++ ++R ++S I +G + Q+L Sbjct: 99 EVWGNEASVLVGDFLFSKSFSLMVQAG-----DLRVLKVISDATTIIAEGEVL-QLLCTS 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + K KT L+ ACE+GAI+ A+ ++ LR FG +LGI FQL DD L Sbjct: 153 DLDMTLERYIEVVKSKTAVLLSAACEAGAILGKATPEQELALRDFGMDLGIAFQLMDDTL 212 Query: 229 D 229 D Sbjct: 213 D 213 >gi|57238790|ref|YP_179926.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Welgevonden] gi|58578715|ref|YP_196927.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Welgevonden] gi|58616777|ref|YP_195976.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Gardel] gi|57160869|emb|CAH57771.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Welgevonden] gi|58416389|emb|CAI27502.1| Octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Gardel] gi|58417341|emb|CAI26545.1| Octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Welgevonden] Length = 325 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 18/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + N N + + AAIE IH +L+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPIIFFIICKMLNYNKNDKVYIAAAIEFIHNATLLHDDV--IDESELRRGEKTSN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---IG-LQGMLGGQM 164 + +I+ G+ LL +F+ + K N+ +LS T N IG ++ M+ Sbjct: 107 FLWGNKASILVGDFLLAVSFQWLIQCK-----NLTILSILSKTSNTIIIGEVEQMVASYN 161 Query: 165 LDI-QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 ++I Q+++ID I KT +L CES A +A + + L+ FG NLGI FQ+ Sbjct: 162 INISQEKYID------IISAKTASLFEATCESAANLAEVNNEKIHALKQFGYNLGISFQI 215 Query: 224 ADDLLD 229 DD+LD Sbjct: 216 LDDILD 221 >gi|114564252|ref|YP_751766.1| trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB 400] gi|114335545|gb|ABI72927.1| Trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB 400] Length = 323 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLSVLAARTVDYQGEHHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L +N++ +L+ T N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TEL-ENMKVLQVLAHTTNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + ++A+ S +++ L +G+ LG FQL DDLL Sbjct: 155 DPDTTEANYMRVIYCKTAKLFEAATQLAGVLANVSPEQEQALADYGKYLGTAFQLTDDLL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|154686522|ref|YP_001421683.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus amyloliquefaciens FZB42] gi|154352373|gb|ABS74452.1| HepT [Bacillus amyloliquefaciens FZB42] Length = 349 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 107/196 (54%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+IR V +++N + V +E IH SL+HDD+ +D+ +RRGKPT Sbjct: 72 GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 127 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++D A+ G+ +L + E++ T+L D ++ +LS T + + G++ Sbjct: 128 IKAKWDNRIAMYTGDYMLAGSLEMM----TRL-DEPKAHRILSKT----IVEVCLGEIEQ 178 Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+D++ E + ++ + K KT L+ +C+ GAI + A + + L FG +G+ +Q+ Sbjct: 179 IRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 238 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE+L K Sbjct: 239 IDDILDFTSTEEELGK 254 >gi|124485508|ref|YP_001030124.1| GCN5-related N-acetyltransferase [Methanocorpusculum labreanum Z] gi|124363049|gb|ABN06857.1| Polyprenyl synthetase [Methanocorpusculum labreanum Z] Length = 322 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 25/222 (11%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-SLFNVNH 69 E SK +D+ L + ASH+ L+S GGK++R LV A S+ Sbjct: 20 EYSKAVDSTLQ----KAASHL-------LVS-------GGKRLRPALVLLSAESIRKGAS 61 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + A+E H ++L+HDD+ MD +RRG+PTVH+ ++E TAI+AG+ L AFE Sbjct: 62 EDIFQAALALEWTHTFTLVHDDI--MDGDSLRRGRPTVHVVWNEATAILAGDVLYANAFE 119 Query: 130 IISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 + K ++ I Q++ H + +G + + + E + M++K KTG Sbjct: 120 YLCRVKNATAESKVIAVQMLAHSCHEL-CEGQQEDVSFETRSDVTLEEYLSMVRK-KTGV 177 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L A GA +A + L G N GI FQ+ DD++D Sbjct: 178 LYAAAAGIGAALAGGDVKQISALYTLGLNTGIAFQIQDDIID 219 >gi|308174066|ref|YP_003920771.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens DSM 7] gi|307606930|emb|CBI43301.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens DSM 7] gi|328912396|gb|AEB63992.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens LL3] Length = 320 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 107/196 (54%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+IR V +++N + V +E IH SL+HDD+ +D+ +RRGKPT Sbjct: 43 GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 98 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++D A+ G+ +L + E++ T+L D ++ +LS T + + G++ Sbjct: 99 IKAKWDNRIAMYTGDYMLAGSLEMM----TRL-DEPKAHRILSKT----IVEVCLGEIEQ 149 Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+D++ E + ++ + K KT L+ +C+ GAI + A + + L FG +G+ +Q+ Sbjct: 150 IRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 209 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE+L K Sbjct: 210 IDDILDFTSTEEELGK 225 >gi|82778501|ref|YP_404850.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197] gi|309785515|ref|ZP_07680146.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617] gi|81242649|gb|ABB63359.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197] gi|308926635|gb|EFP72111.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617] Length = 323 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S NI +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNIIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|259650464|dbj|BAI42626.1| polyprenyl synthetase [Lactobacillus rhamnosus GG] Length = 312 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 13/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +RS L+ A ++ + GAAIE +H +L+HDD+ +D+ IRRG TV Sbjct: 35 GGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVS 92 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + AI AG+ L F+++S P+T L+ N R +M + Q ++ Sbjct: 93 AESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNAR--IMKRIFMGEVDQNGPSAPLI 150 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + ++ KT AL A +GA + H S +K+ FG LG+ FQ+ D Sbjct: 151 PTVNAYLSAI------SGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMID 204 Query: 226 DLLDCEE 232 DLLD + Sbjct: 205 DLLDYTQ 211 >gi|295696360|ref|YP_003589598.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912] gi|295411962|gb|ADG06454.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912] Length = 327 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R +V AL R AA+E IH +L+HDD+ +D RRG+PTV Sbjct: 43 GGKRLRPLVVLVSGRFGPRRDTEALVRAAAALEMIHMATLVHDDV--IDRSDTRRGRPTV 100 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + A+ G+ L A E++S +++D L + M G++ + Sbjct: 101 KAAWGDQLALYTGDFLFARALELLS----EMEDR-----RLHEVTAWAIARMCQGELEQM 151 Query: 168 QDEF-IDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D + ID+ + + + KT LM +C GA A A + L FG +LG+ FQ+ Sbjct: 152 HDLYRIDQPLFRYYRRIRQKTALLMAVSCLVGARAAEADEETARALWRFGGHLGMAFQIV 211 Query: 225 DDLLD 229 DD+LD Sbjct: 212 DDVLD 216 >gi|158422531|ref|YP_001523823.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571] gi|158329420|dbj|BAF86905.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571] Length = 335 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L CA+L + +++ A++E +H +L+HDD+ +D +RRGK Sbjct: 54 GGKRLRPMLTIACAALSSYEGDGHIKLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ +I S ++ +Q + Sbjct: 112 KLWGNEASVLVGDFLLGQAFKMMVEVGILECLDILSTAACTIAEGEVMQLAAAKNTETSE 171 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT L ACE GA++ + E+ R FG NLGI FQL DD L Sbjct: 172 DDYL------AVIRGKTAELFAAACEVGAVLNARPKAEQAACRSFGMNLGIAFQLVDDAL 225 Query: 229 D 229 D Sbjct: 226 D 226 >gi|258509177|ref|YP_003171928.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus GG] gi|257149104|emb|CAR88077.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus GG] Length = 322 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 13/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +RS L+ A ++ + GAAIE +H +L+HDD+ +D+ IRRG TV Sbjct: 45 GGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVS 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + AI AG+ L F+++S P+T L+ N R +M + Q ++ Sbjct: 103 AESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNAR--IMKRIFMGEVDQNGPSAPLI 160 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + ++ KT AL A +GA + H S +K+ FG LG+ FQ+ D Sbjct: 161 PTVNAYLSAI------SGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMID 214 Query: 226 DLLDCEE 232 DLLD + Sbjct: 215 DLLDYTQ 221 >gi|199597413|ref|ZP_03210843.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus HN001] gi|199591673|gb|EDY99749.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus HN001] Length = 322 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 13/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +RS L+ A ++ + GAAIE +H +L+HDD+ +D+ IRRG TV Sbjct: 45 GGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVS 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + AI AG+ L F+++S P+T L+ N R +M + Q ++ Sbjct: 103 AESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNAR--IMKRIFMGEVDQNGPSAPLI 160 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + ++ KT AL A +GA + H S +K+ FG LG+ FQ+ D Sbjct: 161 PTVNAYLSAI------SGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMID 214 Query: 226 DLLDCEE 232 DLLD + Sbjct: 215 DLLDYTQ 221 >gi|291435805|ref|ZP_06575195.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672] gi|291338700|gb|EFE65656.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672] Length = 379 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + T + A+E +H +SL+HDDL MD RR + TV Sbjct: 88 GGKAVRPALAVLSAEVTGAAPQTGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 145 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T D R+ L+ + ++ GQ DI Sbjct: 146 KVHGPAQAILVGDALFALANEVLLELGT--VDAGRAARRLTTAS----RALIDGQAQDIS 199 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + + L +G +LG+ FQ D Sbjct: 200 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADSLEKYGYHLGLAFQAVD 259 Query: 226 DLL 228 DLL Sbjct: 260 DLL 262 >gi|84515724|ref|ZP_01003085.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53] gi|84510166|gb|EAQ06622.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53] Length = 332 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 9/200 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A + + + + A +E IH +L+H Sbjct: 33 MASEHAPRIPQVTAHLVEAGGKRLRPMLTLAAARMCGYDGPYHIHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L +F+++ + +I + + Sbjct: 93 DDV--VDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDILANASAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + +D +I + + KT AL A E G +A K+ Sbjct: 151 IAEGEVLQLTAAADLATTEDIYIK------VVRGKTAALFSAAMEVGGEIAGQDPAIKQA 204 Query: 210 LRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 205 LFDYGDALGISFQIVDDLLD 224 >gi|328552808|gb|AEB23300.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens TA208] Length = 320 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 107/196 (54%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+IR V +++N + V +E IH SL+HDD+ +D+ +RRGKPT Sbjct: 43 GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 98 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++D A+ G+ +L + E++ T+L D ++ +LS T + + G++ Sbjct: 99 IKAKWDNRIAMYTGDYMLADSLEMM----TRL-DEPKAHRILSKT----IVEVCLGEIEQ 149 Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+D++ E + ++ + K KT L+ +C+ GAI + A + + L FG +G+ +Q+ Sbjct: 150 IRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 209 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE+L K Sbjct: 210 IDDILDFTSTEEELGK 225 >gi|319897631|ref|YP_004135828.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031] gi|317433137|emb|CBY81511.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031] Length = 329 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL ++++ +++ N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQNYGRYLGTAFQLVDDVL 220 Query: 229 D 229 D Sbjct: 221 D 221 >gi|57866983|ref|YP_188615.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A] gi|282876098|ref|ZP_06284965.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis SK135] gi|57637641|gb|AAW54429.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A] gi|281295123|gb|EFA87650.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis SK135] gi|329725457|gb|EGG61940.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis VCU144] gi|329735239|gb|EGG71531.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis VCU045] gi|329737300|gb|EGG73554.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis VCU028] Length = 319 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 20/202 (9%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91 +D+ L + LL GGK++R V + N + RV A+E IH +L+HDD Sbjct: 24 SDQTLQEASFHLLSSGGKRVRPAFVILSGQFGSNNKPSEDTYRVAVALELIHMATLVHDD 83 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSL 150 + +D RRG+ T+ ++D+ TAI+ GN LL + +S T++ I ++ Sbjct: 84 V--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEISDTRVHSTISKSIV--- 138 Query: 151 THNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEK 207 + G++ QD+F ++T ++++ KT L+ + + GAI ++AS + Sbjct: 139 -------DVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSNASNDVI 191 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 +L+ G +G+ FQ+ DD+LD Sbjct: 192 RKLKMIGHYIGMSFQIIDDVLD 213 >gi|254449834|ref|ZP_05063271.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus 238] gi|198264240|gb|EDY88510.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus 238] Length = 332 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 9/200 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A + + + A +E IH +L+H Sbjct: 33 MASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAKMCGYGGPYHVHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L +F+++ + +I + + Sbjct: 93 DDV--VDESAQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDILANASAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + D E I + KT AL A E G ++A + + Sbjct: 151 IAEGEVLQ------LTAASDLATSEAVYLQIVRGKTAALFSAALEVGGVIAQQDEALVKA 204 Query: 210 LRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 205 LYDYGDALGIGFQIVDDLLD 224 >gi|170017917|ref|YP_001728836.1| geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20] gi|169804774|gb|ACA83392.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20] Length = 332 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 21/226 (9%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNH 69 E S + +L+D+ + H+ + D +AIR L GK IR L + L N + Sbjct: 15 ELSAPLQAVLEDM--SASWHIGFEEID---TAIRSQLNAGKLIRPALTLLFSRLSDNPYN 69 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A+ +GA++E +H +LIHDD+ +D +RRG ++ Q+ + TA+ AG+ LLT F Sbjct: 70 AKAISLGASLELLHLATLIHDDI--IDESKLRRGHESIQSQFGKDTAVYAGDYLLTGMFS 127 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTG 186 ++ + + + LQ +L G+++ Q+ + D K KT Sbjct: 128 LLERADKPAANKLALK---------ALQEILFGELVQKQNRYNLSADFNSYLTQIKGKTA 178 Query: 187 ALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231 AL + G I + S+ E + GEN+G+ FQL DD LD E Sbjct: 179 ALFRLSVSFGVISGDNYSEPLLETVSHLGENIGVTFQLLDDYLDFE 224 >gi|313200295|ref|YP_004038953.1| trans-hexaprenyltranstransferase [Methylovorus sp. MP688] gi|312439611|gb|ADQ83717.1| Trans-hexaprenyltranstransferase [Methylovorus sp. MP688] Length = 309 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A F + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 30 GGKRLRPALVLLSAGAFGEVNARHHELAAVVEFIHTATLLHDDV--VDESAMRRGRATAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + + AF+++ ++ +R +L+ NI +G + Q+L++ Sbjct: 88 TLFGNAASVLVGDFIYSRAFQMMVGVES-----MRVMEVLAEATNIIAEGEVL-QLLNVH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I + + KT L A GAI+ AS+ +++ + +G LG FQL DD+L Sbjct: 142 DADITDEAYLKVIHYKTAKLFEAATRLGAIICSASEQDEQAMAEYGMRLGTAFQLIDDVL 201 Query: 229 DCEED 233 D D Sbjct: 202 DFSGD 206 >gi|293366563|ref|ZP_06613240.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|291319332|gb|EFE59701.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis M23864:W2(grey)] Length = 332 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 20/202 (9%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91 +D+ L + LL GGK++R V + N + RV A+E IH +L+HDD Sbjct: 37 SDQTLQEASFHLLSSGGKRVRPAFVILSGQFGSNNKPSEDTYRVAVALELIHMATLVHDD 96 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSL 150 + +D RRG+ T+ ++D+ TAI+ GN LL + +S T++ I ++ Sbjct: 97 V--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEISDTRVHSTISKSIV--- 151 Query: 151 THNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEK 207 + G++ QD+F ++T ++++ KT L+ + + GAI ++AS + Sbjct: 152 -------DVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSNASNDVI 204 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 +L+ G +G+ FQ+ DD+LD Sbjct: 205 RKLKMIGHYIGMSFQIIDDVLD 226 >gi|208809557|ref|ZP_03251894.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4206] gi|208729358|gb|EDZ78959.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4206] Length = 324 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 44 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 102 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 156 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 215 Query: 229 DCEED 233 D D Sbjct: 216 DYNAD 220 >gi|92118681|ref|YP_578410.1| farnesyltranstransferase [Nitrobacter hamburgensis X14] gi|91801575|gb|ABE63950.1| Farnesyltranstransferase [Nitrobacter hamburgensis X14] Length = 336 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + +++ A++E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAMAHLAGYSGEGHIKLAASVEFMHTATLLHDDV--VDESELRRGKLSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 113 MVWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTE 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G ++ + E+ FG NLGI FQL DD+L Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPVLGGRPKAEEMAAASFGMNLGIAFQLVDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|206578772|ref|YP_002236401.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342] gi|288933385|ref|YP_003437444.1| dimethylallyltranstransferase [Klebsiella variicola At-22] gi|290511564|ref|ZP_06550933.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55] gi|206567830|gb|ACI09606.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342] gi|288888114|gb|ADC56432.1| Dimethylallyltranstransferase [Klebsiella variicola At-22] gi|289776557|gb|EFD84556.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55] Length = 323 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF+++ TQL +++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMM----TQLG-SLKILEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + ++A S E+ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAASQCAGMLADCSAEEERALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|313763299|gb|EFS34663.1| polyprenyl synthetase [Propionibacterium acnes HL013PA1] gi|313814961|gb|EFS52675.1| polyprenyl synthetase [Propionibacterium acnes HL059PA1] gi|313829356|gb|EFS67070.1| polyprenyl synthetase [Propionibacterium acnes HL063PA2] gi|314916753|gb|EFS80584.1| polyprenyl synthetase [Propionibacterium acnes HL005PA4] gi|314919121|gb|EFS82952.1| polyprenyl synthetase [Propionibacterium acnes HL050PA1] gi|314921201|gb|EFS85032.1| polyprenyl synthetase [Propionibacterium acnes HL050PA3] gi|314930371|gb|EFS94202.1| polyprenyl synthetase [Propionibacterium acnes HL067PA1] gi|314956154|gb|EFT00550.1| polyprenyl synthetase [Propionibacterium acnes HL027PA1] gi|314959687|gb|EFT03789.1| polyprenyl synthetase [Propionibacterium acnes HL002PA1] gi|314969768|gb|EFT13866.1| polyprenyl synthetase [Propionibacterium acnes HL037PA1] gi|315098089|gb|EFT70065.1| polyprenyl synthetase [Propionibacterium acnes HL059PA2] gi|315102693|gb|EFT74669.1| polyprenyl synthetase [Propionibacterium acnes HL046PA1] gi|315108835|gb|EFT80811.1| polyprenyl synthetase [Propionibacterium acnes HL030PA2] gi|327451646|gb|EGE98300.1| polyprenyl synthetase [Propionibacterium acnes HL087PA3] gi|327452299|gb|EGE98953.1| polyprenyl synthetase [Propionibacterium acnes HL083PA2] gi|328752132|gb|EGF65748.1| polyprenyl synthetase [Propionibacterium acnes HL025PA2] gi|328757024|gb|EGF70640.1| polyprenyl synthetase [Propionibacterium acnes HL087PA1] Length = 324 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R LV C+ + VN +R +E H SL HDD+ MD RRG P+ Sbjct: 46 GGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++++ AI+ G+ Y F S +L D ++ Q + T + +QG + Sbjct: 104 NLRWGNSVAIMVGD----YLFSKASLAVAELGVDFVKLQ---ARTFSRLVQGQIAETRGP 156 Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q + D ++ + KTG+L+ + GA+++HAS L FGE++G +FQLAD Sbjct: 157 SQGQ--DPLAHYLKVVADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLAD 214 Query: 226 DLLD 229 DL+D Sbjct: 215 DLID 218 >gi|5712726|gb|AAD47627.1| octylprenyl diphosphate synthase-like protein [Pseudomonas sp. BG33R] Length = 322 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + + +FE++ + I SQ + LQ + ++ Sbjct: 101 AMWGNAPSVLVGDFMYSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQ------LSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT + S A + A+ + E LR FG+NLG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMFFEASTHSAAALCGATAEQAEALRTFGDNLGVAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYKGD 219 >gi|256825934|ref|YP_003149894.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM 20547] gi|256689327|gb|ACV07129.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM 20547] Length = 324 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 23/209 (11%) Query: 33 TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 QH+D ++ L+ GGK+ R L + L + ++ AA+E +H SL HD Sbjct: 28 VQHDDPFIAEASAYLMQAGGKRFRPQLALLVSGLGDGPTPEVVKAAAAVELVHLASLYHD 87 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ MD+ +RRG P+ + +Y T+++ G+ L + +++ + +R Q + Sbjct: 88 DV--MDDADLRRGVPSANARYGNATSVVVGDMLFGKSSALVAELGPE---AVRLQADTFV 142 Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQ 204 + GQ I+DE V + + KTGAL+ A GA + Sbjct: 143 R-------LCAGQ---IRDERPVPAGVDPVDHLLGVLADKTGALIAAAACYGAQFSGCDA 192 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 E + FGE LG++FQLADDLLD D Sbjct: 193 ATVELMGAFGERLGLVFQLADDLLDVASD 221 >gi|226312054|ref|YP_002771948.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis NBRC 100599] gi|226095002|dbj|BAH43444.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis NBRC 100599] Length = 321 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 35/225 (15%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70 E K IDT + +L L +++H LL A GGK+IR V N + Sbjct: 20 ELEKAIDTPVRELYL-SSTH--------LLKA------GGKRIRPVFVLLGGKWGNYDVK 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 V +E IH SL+HDD+ +D+ RRGK TV +++D A+ AG+ + A I Sbjct: 65 KLKHVAVPLELIHMASLVHDDV--IDDADKRRGKDTVRMKWDNKVAMYAGDYIFARALAI 122 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNI---GLQGMLGGQMLDIQD--EFIDETQVFMIQ-KMK 184 S QL + H I + + G++ ++D + + ++ + K K Sbjct: 123 AS------------QLPIPQLHQILSNAIVEVCKGEIQQVKDLNNWDQNFRTYLRRIKRK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T L+ +C+ GA+ + AS + ++ +G N+G+ FQ+ DD+LD Sbjct: 171 TALLIAISCQLGAVASGASADMIRKMYWYGYNVGMAFQITDDILD 215 >gi|294012754|ref|YP_003546214.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S] gi|292676084|dbj|BAI97602.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S] Length = 346 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L CA L ++ AA+E IH +L+HDD+ +D +RRG+ T + Sbjct: 65 GGKRMRPMLTLACADLVGYAGSRHYKLAAAVEFIHTATLLHDDV--VDGSGLRRGRKTAN 122 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + +++ G+ L + +FE++ ++ ++ +LS + +G + Q+ + Sbjct: 123 IIWGNSASVLVGDFLFSRSFELMVEAES-----LKVLKILSNASAVIAEGEVN-QLTAQR 176 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E Q I KT AL AC A++A + E++ L +G NLGI FQL DD + Sbjct: 177 KIDTSEEQYLDIIGAKTAALFAAACRISAVVADRDEAEEQALDVYGRNLGIAFQLIDDAI 236 Query: 229 DCEED 233 D E D Sbjct: 237 DYESD 241 >gi|307294472|ref|ZP_07574314.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1] gi|306878946|gb|EFN10164.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1] Length = 346 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L CA L ++ AA+E IH +L+HDD+ +D +RRG+ T + Sbjct: 65 GGKRMRPMLTLACADLVGYAGSRHYKLAAAVEFIHTATLLHDDV--VDGSGLRRGRKTAN 122 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + +++ G+ L + +FE++ ++ ++ +LS + +G + Q+ + Sbjct: 123 IIWGNSASVLVGDFLFSRSFELMVEAES-----LKVLKILSNASAVIAEGEVN-QLTAQR 176 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E Q I KT AL AC A++A + E++ L +G NLGI FQL DD + Sbjct: 177 KIDTSEEQYLDIIGAKTAALFAAACRISAVVADRDEAEEQALDVYGRNLGIAFQLIDDAI 236 Query: 229 DCEED 233 D E D Sbjct: 237 DYESD 241 >gi|251772722|gb|EES53284.1| trans-hexaprenyltranstransferase [Leptospirillum ferrodiazotrophum] Length = 332 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 23/197 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + L + + A +E IH +L+HDD+ +DN +RRGK H Sbjct: 51 GGKRLRPLLMVISSRLSGAEGPEPILLAAVVEMIHTATLLHDDV--VDNADVRRGKKAAH 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ AI+ G+ L + + + ++ SLT + + M G++L++ Sbjct: 109 QRWGNQPAILVGDFLYANSLWLAMGLHSHEVND-------SLT--LACKKMSEGEILEL- 158 Query: 169 DEFID------ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 F+D E Q + + KT L C G I+ S EKE L FG +G+ FQ Sbjct: 159 --FLDGNLEATEDQYYNVAACKTATLTASTCRLGGILGGLSDEEKEALDRFGYYVGMAFQ 216 Query: 223 LADDLLD---CEEDLPK 236 +ADD LD EE L K Sbjct: 217 VADDALDYMASEEKLGK 233 >gi|323961158|gb|EGB56772.1| polyprenyl synthetase [Escherichia coli H489] Length = 323 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|298674206|ref|YP_003725956.1| polyprenyl synthetase [Methanohalobium evestigatum Z-7303] gi|298287194|gb|ADI73160.1| Polyprenyl synthetase [Methanohalobium evestigatum Z-7303] Length = 288 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 10/189 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR ++ + + T++ A+E +H SLIHDDL +D+G IRRG P+ H Sbjct: 40 GGKRIRPIILMLSTDICGGDSKTSINAALAVELMHSASLIHDDL--IDDGIIRRGVPSAH 97 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A++ G+ L++ + E++SS Q +S+ H + LGG Sbjct: 98 KKFGHSAAMLCGDFLISKSIELMSSYGHNAITEF-GQAGMSMAHGETID--LGG-----D 149 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E F KT +L GA ++ A R R +GE +G +Q+ DDLL Sbjct: 150 DAGFVEVNYFDCIYKKTASLFAACASIGAYISGADDEMVHRCRLYGEYMGTAYQIVDDLL 209 Query: 229 DCEEDLPKK 237 + ++ K Sbjct: 210 EYLHEIDDK 218 >gi|308270513|emb|CBX27125.1| hypothetical protein N47_A11540 [uncultured Desulfobacterium sp.] Length = 326 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + N E +H +L+HDD+ +D +RRGKP + Sbjct: 45 GGKRLRPLLMVLSARICNYKGGYDKVFSTIFEYLHAATLLHDDV--IDGAELRRGKPVAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + T ++ G+ LL I ++ T+ I+ ++ +T N+ QG + Q+L Sbjct: 103 SIWKNSTVVLTGDFLLARGLSIAAA--TEKPSVIK--IVAEITENMS-QGEIE-QLLRKG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + I KT L AC A +A+AS+ E++ + +G NLG+ FQ+ADDLL Sbjct: 157 DINLTEEEYRKIIWRKTAVLFQGACRISARLANASKREEKAVSNYGYNLGMAFQMADDLL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|296313619|ref|ZP_06863560.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC 43768] gi|296839857|gb|EFH23795.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC 43768] Length = 324 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ D++R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVD-----SDSMRVLEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|169779988|ref|XP_001824458.1| hexaprenyl pyrophosphate synthase [Aspergillus oryzae RIB40] gi|238505986|ref|XP_002384195.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus flavus NRRL3357] gi|83773198|dbj|BAE63325.1| unnamed protein product [Aspergillus oryzae] gi|220690309|gb|EED46659.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus flavus NRRL3357] Length = 451 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 21/169 (12%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T R+ E IH SL+HDD+ +DN RR + ++Q+ A++AG+ LL A Sbjct: 190 TQRRLAEITELIHTASLLHDDV--IDNAVTRRSSSSANLQFGNKMAVLAGDFLLGRASVA 247 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE----FIDETQVFMIQK 182 ++ +L+D ++L+ ++ N ++ G+ + ++ DE F DET + +QK Sbjct: 248 LA----RLRDPEVTELLATVIAN-----LVEGEFMQLKNTASDEKNPVFTDETISYYLQK 298 Query: 183 --MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KT +L+ +C + A++ ++ E +G NLG+ FQL DD+LD Sbjct: 299 TYLKTASLISKSCRAAALLGDSTPQVVEAAYAYGRNLGLAFQLVDDMLD 347 >gi|220905174|ref|YP_002480486.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869473|gb|ACL49808.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 321 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + + +E +H +L+HDD+ +DN RRGKP H Sbjct: 41 GGKRLRPLLTVLTARLLGHDREDIHDLAVTLEMLHAATLLHDDV--LDNAMSRRGKPAAH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y+ + I+AG+ LL A ++ R L+ + G++L+I Sbjct: 99 TLYNVSSVILAGDALLAEANAQVAR---------RGDPRLTRCFSEATSRTAAGEILEIA 149 Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +T +++ KT L+ ACE GA+ A A + +GENLG+ FQ+ D Sbjct: 150 AQGRVDTSAGHYEEIVRGKTAWLIRAACEMGALAAEADEASVAAAAAYGENLGMAFQMVD 209 Query: 226 DLLD 229 D LD Sbjct: 210 DALD 213 >gi|27468075|ref|NP_764712.1| heptaprenyl diphosphate syntase component II [Staphylococcus epidermidis ATCC 12228] gi|27315620|gb|AAO04754.1|AE016747_251 heptaprenyl diphosphate syntase component II [Staphylococcus epidermidis ATCC 12228] Length = 339 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 20/202 (9%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91 +D+ L + LL GGK++R V + N + RV A+E IH +L+HDD Sbjct: 44 SDQTLQEASFHLLSSGGKRVRPAFVILSGQFGSNNKPSEDTYRVAVALELIHMATLVHDD 103 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSL 150 + +D RRG+ T+ ++D+ TAI+ GN LL + +S T++ I ++ Sbjct: 104 V--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEISDTRVHSTISKSIV--- 158 Query: 151 THNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEK 207 + G++ QD+F ++T ++++ KT L+ + + GAI ++AS + Sbjct: 159 -------DVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSNASNDVI 211 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 +L+ G +G+ FQ+ DD+LD Sbjct: 212 RKLKMIGHYIGMSFQIIDDVLD 233 >gi|15803727|ref|NP_289761.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 EDL933] gi|15833320|ref|NP_312093.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. Sakai] gi|168751593|ref|ZP_02776615.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4113] gi|168754169|ref|ZP_02779176.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4401] gi|168765367|ref|ZP_02790374.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4501] gi|168769043|ref|ZP_02794050.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4486] gi|168778214|ref|ZP_02803221.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4196] gi|168781331|ref|ZP_02806338.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4076] gi|168786073|ref|ZP_02811080.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC869] gi|168800901|ref|ZP_02825908.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC508] gi|195940043|ref|ZP_03085425.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. EC4024] gi|208813351|ref|ZP_03254680.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4045] gi|208818474|ref|ZP_03258794.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4042] gi|209396313|ref|YP_002272657.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4115] gi|217327318|ref|ZP_03443401.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. TW14588] gi|254795136|ref|YP_003079973.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. TW14359] gi|261228198|ref|ZP_05942479.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. FRIK2000] gi|261255054|ref|ZP_05947587.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. FRIK966] gi|12517802|gb|AAG58321.1|AE005547_7 octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. EDL933] gi|13363539|dbj|BAB37489.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. Sakai] gi|187766779|gb|EDU30623.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4196] gi|188014375|gb|EDU52497.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4113] gi|189001013|gb|EDU69999.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4076] gi|189358538|gb|EDU76957.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4401] gi|189361792|gb|EDU80211.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4486] gi|189364885|gb|EDU83301.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4501] gi|189374093|gb|EDU92509.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC869] gi|189376838|gb|EDU95254.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC508] gi|208734628|gb|EDZ83315.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4045] gi|208738597|gb|EDZ86279.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4042] gi|209157713|gb|ACI35146.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4115] gi|209758168|gb|ACI77396.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209758170|gb|ACI77397.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209758172|gb|ACI77398.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209758176|gb|ACI77400.1| octaprenyl diphosphate synthase [Escherichia coli] gi|217319685|gb|EEC28110.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. TW14588] gi|254594536|gb|ACT73897.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. TW14359] gi|320189540|gb|EFW64199.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC1212] gi|320640258|gb|EFX09830.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. G5101] gi|320645555|gb|EFX14564.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str. 493-89] gi|320650865|gb|EFX19322.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str. H 2687] gi|320666771|gb|EFX33750.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. LSU-61] gi|326337887|gb|EGD61721.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. 1125] gi|326347457|gb|EGD71182.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. 1044] Length = 323 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|215488503|ref|YP_002330934.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str. E2348/69] gi|215266575|emb|CAS11014.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str. E2348/69] Length = 323 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAIGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|311109204|ref|YP_003982057.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans A8] gi|310763893|gb|ADP19342.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans A8] Length = 308 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 30 GGKRMRPAMVLMVARALGYEGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +++R +LS + +G + Q+L++ Sbjct: 88 AVFGNAASVLVGDYLYSRSFEMMVE-----ANSMRVMSILSEATTVIAEGEVL-QLLNVH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + + KT L A + GA++A A+ ++ +G ++G FQL DD+L Sbjct: 142 DPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVL 201 Query: 229 DCEED 233 D D Sbjct: 202 DYSGD 206 >gi|73654128|gb|AAZ79359.1| farnesyl diphosphate synthase [Citromicrobium sp. JL-364] Length = 146 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 77/135 (57%), Gaps = 4/135 (2%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+PT HI +DE TAI+AG+ L AF ++ L + +R ++ L G GM Sbjct: 13 LRRGRPTTHIAFDEATAILAGDALQALAFGWLAE-APGLPEPVRLIMVRELARASGHGGM 71 Query: 160 LGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGEN 216 +GGQ +D++ + + Q+ + + KTGAL+ + GA+ A + S+ L + + Sbjct: 72 VGGQAIDLESVGKNLALAQLETMHRHKTGALIETSVRIGALTAPSVSEQALASLTEYAKA 131 Query: 217 LGIIFQLADDLLDCE 231 LG+ FQ+ DD+LD E Sbjct: 132 LGLAFQVQDDILDVE 146 >gi|320160874|ref|YP_004174098.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1] gi|319994727|dbj|BAJ63498.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1] Length = 328 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 15/193 (7%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 D LLSA GGK+IR L + L + AAIE +H +L+HDDL +D Sbjct: 43 DLLLSA------GGKRIRPTLTLLAGKMLRAKGEPLLHLAAAIEMLHTATLVHDDL--ID 94 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG PT++ ++ ++ G+ L A + + D+I + S T +I + Sbjct: 95 GSLLRRGMPTLNSRWSPGATVLTGDYLFARAANLAAQ-----TDSIPVMKLFSETLSIIV 149 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 G L QM + + D T + KT +L + +S A++ S+ E LR +G + Sbjct: 150 GGELT-QMFSTRCK-ADRTNYYQRIYAKTASLFETSAKSAALLCLTSELHTEALRAYGYS 207 Query: 217 LGIIFQLADDLLD 229 +G+ FQ+ DD+LD Sbjct: 208 VGMAFQIIDDILD 220 >gi|218131733|ref|ZP_03460537.1| hypothetical protein BACEGG_03354 [Bacteroides eggerthii DSM 20697] gi|317474650|ref|ZP_07933924.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA] gi|217986036|gb|EEC52375.1| hypothetical protein BACEGG_03354 [Bacteroides eggerthii DSM 20697] gi|316909331|gb|EFV31011.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 324 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 16/188 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A L+N L A+E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILVLLAAKLYNEVRPATLHAAVALELLHTASLVHDDV--VDESTERRGQLSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 ++ A++ G+ LL A + R+ ++ L N+G Q + G++L + + Sbjct: 103 IFNNKVAVLTGDYLLATALVEVGMT--------RNYAIIDLVSNLG-QDLAEGELLQLSN 153 Query: 170 ----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E+ +E +I+K KT L ++GA+ + E R FGE +G+ FQ+ D Sbjct: 154 VSNPEYSEEVYFDVIRK-KTAVLFAACMKAGALSVGVDDEKAEYARLFGEYIGLCFQIKD 212 Query: 226 DLLDCEED 233 D+ D E+ Sbjct: 213 DIFDYYEN 220 >gi|318058274|ref|ZP_07976997.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG] gi|318076936|ref|ZP_07984268.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF] Length = 386 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + T + A+E +H +SL+HDDL MD RR + TV Sbjct: 90 GGKAVRPALALISAEVTGASAETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 147 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A EI+ +L + LT + ++ GQ DI Sbjct: 148 KVHGPAQAILVGDALFALANEIL----LELGTPEAGRATRRLTR--ATRALIDGQAQDIS 201 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + + L +G +LG+ FQ D Sbjct: 202 YEHRDRVTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVD 261 Query: 226 DLL 228 DLL Sbjct: 262 DLL 264 >gi|306816471|ref|ZP_07450603.1| octaprenyl diphosphate synthase [Escherichia coli NC101] gi|222034904|emb|CAP77647.1| Octaprenyl-diphosphate synthase [Escherichia coli LF82] gi|305850036|gb|EFM50495.1| octaprenyl diphosphate synthase [Escherichia coli NC101] gi|312947744|gb|ADR28571.1| octaprenyl diphosphate synthase [Escherichia coli O83:H1 str. NRG 857C] Length = 323 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNVHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|50843372|ref|YP_056599.1| heptaprenyl diphosphate synthase component II [Propionibacterium acnes KPA171202] gi|289425619|ref|ZP_06427391.1| polyprenyl synthetase [Propionibacterium acnes SK187] gi|289426999|ref|ZP_06428718.1| polyprenyl synthetase [Propionibacterium acnes J165] gi|295131445|ref|YP_003582108.1| polyprenyl synthetase [Propionibacterium acnes SK137] gi|50840974|gb|AAT83641.1| heptaprenyl diphosphate synthase component II [Propionibacterium acnes KPA171202] gi|289153920|gb|EFD02613.1| polyprenyl synthetase [Propionibacterium acnes SK187] gi|289159821|gb|EFD08006.1| polyprenyl synthetase [Propionibacterium acnes J165] gi|291375644|gb|ADD99498.1| polyprenyl synthetase [Propionibacterium acnes SK137] gi|313773345|gb|EFS39311.1| polyprenyl synthetase [Propionibacterium acnes HL074PA1] gi|313793594|gb|EFS41634.1| polyprenyl synthetase [Propionibacterium acnes HL110PA1] gi|313802896|gb|EFS44109.1| polyprenyl synthetase [Propionibacterium acnes HL110PA2] gi|313806342|gb|EFS44858.1| polyprenyl synthetase [Propionibacterium acnes HL087PA2] gi|313810752|gb|EFS48466.1| polyprenyl synthetase [Propionibacterium acnes HL083PA1] gi|313813689|gb|EFS51403.1| polyprenyl synthetase [Propionibacterium acnes HL025PA1] gi|313821259|gb|EFS58973.1| polyprenyl synthetase [Propionibacterium acnes HL036PA1] gi|313822286|gb|EFS60000.1| polyprenyl synthetase [Propionibacterium acnes HL036PA2] gi|313826156|gb|EFS63870.1| polyprenyl synthetase [Propionibacterium acnes HL063PA1] gi|313831063|gb|EFS68777.1| polyprenyl synthetase [Propionibacterium acnes HL007PA1] gi|313833193|gb|EFS70907.1| polyprenyl synthetase [Propionibacterium acnes HL056PA1] gi|313838164|gb|EFS75878.1| polyprenyl synthetase [Propionibacterium acnes HL086PA1] gi|314926005|gb|EFS89836.1| polyprenyl synthetase [Propionibacterium acnes HL036PA3] gi|314962260|gb|EFT06361.1| polyprenyl synthetase [Propionibacterium acnes HL002PA2] gi|314963225|gb|EFT07325.1| polyprenyl synthetase [Propionibacterium acnes HL082PA1] gi|314973953|gb|EFT18049.1| polyprenyl synthetase [Propionibacterium acnes HL053PA1] gi|314976881|gb|EFT20976.1| polyprenyl synthetase [Propionibacterium acnes HL045PA1] gi|314979346|gb|EFT23440.1| polyprenyl synthetase [Propionibacterium acnes HL072PA2] gi|314985002|gb|EFT29094.1| polyprenyl synthetase [Propionibacterium acnes HL005PA1] gi|314986322|gb|EFT30414.1| polyprenyl synthetase [Propionibacterium acnes HL005PA2] gi|314988581|gb|EFT32672.1| polyprenyl synthetase [Propionibacterium acnes HL005PA3] gi|315079698|gb|EFT51686.1| polyprenyl synthetase [Propionibacterium acnes HL053PA2] gi|315083912|gb|EFT55888.1| polyprenyl synthetase [Propionibacterium acnes HL027PA2] gi|315085048|gb|EFT57024.1| polyprenyl synthetase [Propionibacterium acnes HL002PA3] gi|315089477|gb|EFT61453.1| polyprenyl synthetase [Propionibacterium acnes HL072PA1] gi|315097704|gb|EFT69680.1| polyprenyl synthetase [Propionibacterium acnes HL038PA1] gi|315107928|gb|EFT79904.1| polyprenyl synthetase [Propionibacterium acnes HL030PA1] gi|327325724|gb|EGE67521.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL096PA3] gi|327330828|gb|EGE72573.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL096PA2] gi|327442879|gb|EGE89533.1| polyprenyl synthetase [Propionibacterium acnes HL043PA2] gi|327445271|gb|EGE91925.1| polyprenyl synthetase [Propionibacterium acnes HL043PA1] gi|327447743|gb|EGE94397.1| polyprenyl synthetase [Propionibacterium acnes HL013PA2] gi|327452516|gb|EGE99170.1| polyprenyl synthetase [Propionibacterium acnes HL092PA1] gi|328755076|gb|EGF68692.1| polyprenyl synthetase [Propionibacterium acnes HL020PA1] gi|328761560|gb|EGF75078.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL099PA1] gi|332676315|gb|AEE73131.1| heptaprenyl diphosphate synthase component 2 [Propionibacterium acnes 266] Length = 324 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R LV C+ + VN +R +E H SL HDD+ MD RRG P+ Sbjct: 46 GGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++++ AI+ G+ Y F S +L D ++ Q + T + +QG + Sbjct: 104 NLRWGNSVAIMVGD----YLFSKASLAVAELGVDFVKLQ---ARTFSRLVQGQIAETRGP 156 Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q + D ++ + KTG+L+ + GA+++HAS L FGE++G +FQLAD Sbjct: 157 SQGQ--DPLAHYLKVVADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLAD 214 Query: 226 DLLD 229 DL+D Sbjct: 215 DLID 218 >gi|282855260|ref|ZP_06264592.1| polyprenyl synthetase [Propionibacterium acnes J139] gi|282581848|gb|EFB87233.1| polyprenyl synthetase [Propionibacterium acnes J139] gi|314924082|gb|EFS87913.1| polyprenyl synthetase [Propionibacterium acnes HL001PA1] gi|314965044|gb|EFT09143.1| polyprenyl synthetase [Propionibacterium acnes HL082PA2] gi|314983126|gb|EFT27218.1| polyprenyl synthetase [Propionibacterium acnes HL110PA3] gi|315090668|gb|EFT62644.1| polyprenyl synthetase [Propionibacterium acnes HL110PA4] gi|315093825|gb|EFT65801.1| polyprenyl synthetase [Propionibacterium acnes HL060PA1] gi|315104041|gb|EFT76017.1| polyprenyl synthetase [Propionibacterium acnes HL050PA2] gi|327326484|gb|EGE68273.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL103PA1] Length = 324 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R LV C+ + VN +R +E H SL HDD+ MD RRG P+ Sbjct: 46 GGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++++ AI+ G+ Y F S +L D ++ Q + T + +QG + Sbjct: 104 NLRWGNSVAIMVGD----YLFSRASLAVAELGVDFVKLQ---ARTFSRLVQGQIAETRGP 156 Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q + D ++ + KTG+L+ + GA+++HAS L FGE++G +FQLAD Sbjct: 157 SQGQ--DPLAHYLKVVADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLAD 214 Query: 226 DLLD 229 DL+D Sbjct: 215 DLID 218 >gi|16131077|ref|NP_417654.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. MG1655] gi|24114476|ref|NP_708986.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301] gi|30064525|ref|NP_838696.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T] gi|74313724|ref|YP_312143.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046] gi|82545575|ref|YP_409522.1| octaprenyl diphosphate synthase [Shigella boydii Sb227] gi|89109950|ref|AP_003730.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. W3110] gi|110807053|ref|YP_690573.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401] gi|157155105|ref|YP_001464663.1| octaprenyl diphosphate synthase [Escherichia coli E24377A] gi|170018563|ref|YP_001723517.1| octaprenyl diphosphate synthase [Escherichia coli ATCC 8739] gi|170082722|ref|YP_001732042.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. DH10B] gi|170765991|ref|ZP_02900802.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627] gi|188492215|ref|ZP_02999485.1| polyprenyl synthetase [Escherichia coli 53638] gi|194434492|ref|ZP_03066752.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012] gi|194439175|ref|ZP_03071256.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1] gi|209920662|ref|YP_002294746.1| octaprenyl diphosphate synthase [Escherichia coli SE11] gi|218555757|ref|YP_002388670.1| octaprenyl diphosphate synthase [Escherichia coli IAI1] gi|218696892|ref|YP_002404559.1| octaprenyl diphosphate synthase [Escherichia coli 55989] gi|218701956|ref|YP_002409585.1| octaprenyl diphosphate synthase [Escherichia coli IAI39] gi|218706807|ref|YP_002414326.1| octaprenyl diphosphate synthase [Escherichia coli UMN026] gi|238902289|ref|YP_002928085.1| octaprenyl diphosphate synthase [Escherichia coli BW2952] gi|253771979|ref|YP_003034810.1| octaprenyl diphosphate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163129|ref|YP_003046237.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606] gi|256018894|ref|ZP_05432759.1| octaprenyl diphosphate synthase [Shigella sp. D9] gi|256024238|ref|ZP_05438103.1| octaprenyl diphosphate synthase [Escherichia sp. 4_1_40B] gi|260857314|ref|YP_003231205.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str. 11368] gi|260869938|ref|YP_003236340.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str. 11128] gi|291284561|ref|YP_003501379.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str. CB9615] gi|293406796|ref|ZP_06650722.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412] gi|298382537|ref|ZP_06992134.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302] gi|300817559|ref|ZP_07097775.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300823848|ref|ZP_07103972.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300897953|ref|ZP_07116330.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300904377|ref|ZP_07122226.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300918947|ref|ZP_07135503.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300926070|ref|ZP_07141891.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|300929881|ref|ZP_07145324.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|300938101|ref|ZP_07152876.1| polyprenyl synthetase [Escherichia coli MS 21-1] gi|300948840|ref|ZP_07162906.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300955774|ref|ZP_07168117.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|301022044|ref|ZP_07185986.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|301025932|ref|ZP_07189417.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|301301753|ref|ZP_07207887.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|301326382|ref|ZP_07219744.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|307139873|ref|ZP_07499229.1| octaprenyl diphosphate synthase [Escherichia coli H736] gi|307313108|ref|ZP_07592734.1| Trans-hexaprenyltranstransferase [Escherichia coli W] gi|309793766|ref|ZP_07688192.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|312968475|ref|ZP_07782684.1| polyprenyl synthetase family protein [Escherichia coli 2362-75] gi|312972539|ref|ZP_07786713.1| polyprenyl synthetase family protein [Escherichia coli 1827-70] gi|331643885|ref|ZP_08345016.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H736] gi|331648987|ref|ZP_08350075.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M605] gi|331654791|ref|ZP_08355791.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M718] gi|331670014|ref|ZP_08370859.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA271] gi|331679266|ref|ZP_08379938.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H591] gi|332279982|ref|ZP_08392395.1| octaprenyl diphosphate synthase [Shigella sp. D9] gi|83286883|sp|P0AD57|ISPB_ECOLI RecName: Full=Octaprenyl-diphosphate synthase; AltName: Full=All-trans-octaprenyl-diphosphate synthase; AltName: Full=Octaprenyl pyrophosphate synthase; Short=OPP synthase gi|83286884|sp|P0AD58|ISPB_SHIFL RecName: Full=Octaprenyl-diphosphate synthase; AltName: Full=All-trans-octaprenyl-diphosphate synthase; AltName: Full=Octaprenyl pyrophosphate synthase; Short=OPP synthase gi|606125|gb|AAA57988.1| ORF_o323 [Escherichia coli str. K-12 substr. MG1655] gi|1789578|gb|AAC76219.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. MG1655] gi|24053659|gb|AAN44693.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301] gi|30042784|gb|AAP18507.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T] gi|73857201|gb|AAZ89908.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046] gi|81246986|gb|ABB67694.1| octaprenyl diphosphate synthase [Shigella boydii Sb227] gi|85675981|dbj|BAE77231.1| octaprenyl diphosphate synthase [Escherichia coli str. K12 substr. W3110] gi|110616601|gb|ABF05268.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401] gi|157077135|gb|ABV16843.1| octaprenyl-diphosphate synthase [Escherichia coli E24377A] gi|169753491|gb|ACA76190.1| Polyprenyl synthetase [Escherichia coli ATCC 8739] gi|169890557|gb|ACB04264.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. DH10B] gi|170125137|gb|EDS94068.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627] gi|188487414|gb|EDU62517.1| polyprenyl synthetase [Escherichia coli 53638] gi|194417271|gb|EDX33380.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012] gi|194421871|gb|EDX37877.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1] gi|209758174|gb|ACI77399.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209913921|dbj|BAG78995.1| octaprenyl-diphosphate synthase [Escherichia coli SE11] gi|218353624|emb|CAU99827.1| octaprenyl diphosphate synthase [Escherichia coli 55989] gi|218362525|emb|CAR00149.1| octaprenyl diphosphate synthase [Escherichia coli IAI1] gi|218371942|emb|CAR19798.1| octaprenyl diphosphate synthase [Escherichia coli IAI39] gi|218433904|emb|CAR14821.1| octaprenyl diphosphate synthase [Escherichia coli UMN026] gi|238861931|gb|ACR63929.1| octaprenyl diphosphate synthase [Escherichia coli BW2952] gi|242378730|emb|CAQ33520.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)] gi|253323023|gb|ACT27625.1| Trans-hexaprenyltranstransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975030|gb|ACT40701.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606] gi|253979186|gb|ACT44856.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)] gi|257755963|dbj|BAI27465.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str. 11368] gi|257766294|dbj|BAI37789.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str. 11128] gi|260447786|gb|ACX38208.1| Polyprenyl synthetase [Escherichia coli DH1] gi|281180229|dbj|BAI56559.1| octaprenyl-diphosphate synthase [Escherichia coli SE15] gi|281602570|gb|ADA75554.1| Octaprenyl-diphosphate synthase [Shigella flexneri 2002017] gi|284923209|emb|CBG36303.1| octaprenyl-diphosphate synthase [Escherichia coli 042] gi|290764434|gb|ADD58395.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str. CB9615] gi|291426802|gb|EFE99834.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412] gi|298277677|gb|EFI19193.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302] gi|299879904|gb|EFI88115.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|300317358|gb|EFJ67142.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|300358334|gb|EFJ74204.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300397718|gb|EFJ81256.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|300403684|gb|EFJ87222.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300413928|gb|EFJ97238.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300417874|gb|EFK01185.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|300451683|gb|EFK15303.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300456907|gb|EFK20400.1| polyprenyl synthetase [Escherichia coli MS 21-1] gi|300462199|gb|EFK25692.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|300523616|gb|EFK44685.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300529857|gb|EFK50919.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300842734|gb|EFK70494.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|300846914|gb|EFK74674.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|306907019|gb|EFN37527.1| Trans-hexaprenyltranstransferase [Escherichia coli W] gi|308122723|gb|EFO59985.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|309703613|emb|CBJ02953.1| octaprenyl-diphosphate synthase [Escherichia coli ETEC H10407] gi|310334916|gb|EFQ01121.1| polyprenyl synthetase family protein [Escherichia coli 1827-70] gi|312286693|gb|EFR14604.1| polyprenyl synthetase family protein [Escherichia coli 2362-75] gi|313648570|gb|EFS13012.1| polyprenyl synthetase family protein [Shigella flexneri 2a str. 2457T] gi|315062493|gb|ADT76820.1| octaprenyl diphosphate synthase [Escherichia coli W] gi|315137773|dbj|BAJ44932.1| conserved hypothetical protein [Escherichia coli DH1] gi|315257114|gb|EFU37082.1| polyprenyl synthetase [Escherichia coli MS 85-1] gi|315617270|gb|EFU97879.1| polyprenyl synthetase family protein [Escherichia coli 3431] gi|320174552|gb|EFW49688.1| Octaprenyl-diphosphate synthase [Shigella dysenteriae CDC 74-1112] gi|320181462|gb|EFW56380.1| Octaprenyl-diphosphate synthase [Shigella boydii ATCC 9905] gi|320186674|gb|EFW61398.1| Octaprenyl-diphosphate synthase [Shigella flexneri CDC 796-83] gi|320194672|gb|EFW69302.1| Octaprenyl-diphosphate synthase [Escherichia coli WV_060327] gi|320202101|gb|EFW76676.1| Octaprenyl-diphosphate synthase [Escherichia coli EC4100B] gi|320656246|gb|EFX24158.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661936|gb|EFX29344.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str. USDA 5905] gi|323154401|gb|EFZ40602.1| polyprenyl synthetase family protein [Escherichia coli EPECa14] gi|323165148|gb|EFZ50938.1| polyprenyl synthetase family protein [Shigella sonnei 53G] gi|323173553|gb|EFZ59182.1| polyprenyl synthetase family protein [Escherichia coli LT-68] gi|323178637|gb|EFZ64213.1| polyprenyl synthetase family protein [Escherichia coli 1180] gi|323183141|gb|EFZ68539.1| polyprenyl synthetase family protein [Escherichia coli 1357] gi|323189192|gb|EFZ74476.1| polyprenyl synthetase family protein [Escherichia coli RN587/1] gi|323376919|gb|ADX49187.1| Polyprenyl synthetase [Escherichia coli KO11] gi|323936119|gb|EGB32413.1| polyprenyl synthetase [Escherichia coli E1520] gi|323941713|gb|EGB37892.1| polyprenyl synthetase [Escherichia coli E482] gi|323946959|gb|EGB42975.1| polyprenyl synthetase [Escherichia coli H120] gi|323970250|gb|EGB65521.1| polyprenyl synthetase [Escherichia coli TA007] gi|323979096|gb|EGB74174.1| polyprenyl synthetase [Escherichia coli TW10509] gi|324018330|gb|EGB87549.1| polyprenyl synthetase [Escherichia coli MS 117-3] gi|324119552|gb|EGC13434.1| polyprenyl synthetase [Escherichia coli E1167] gi|330909241|gb|EGH37755.1| octaprenyl-diphosphate synthase [Escherichia coli AA86] gi|331037356|gb|EGI09580.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H736] gi|331042734|gb|EGI14876.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M605] gi|331048173|gb|EGI20250.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M718] gi|331062927|gb|EGI34841.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA271] gi|331073331|gb|EGI44654.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H591] gi|332086238|gb|EGI91396.1| polyprenyl synthetase family protein [Shigella boydii 5216-82] gi|332086522|gb|EGI91669.1| polyprenyl synthetase family protein [Shigella dysenteriae 155-74] gi|332090693|gb|EGI95787.1| polyprenyl synthetase family protein [Shigella boydii 3594-74] gi|332102334|gb|EGJ05680.1| octaprenyl diphosphate synthase [Shigella sp. D9] gi|332345144|gb|AEE58478.1| polyprenyl synthetase [Escherichia coli UMNK88] gi|332752346|gb|EGJ82736.1| polyprenyl synthetase family protein [Shigella flexneri 4343-70] gi|332752872|gb|EGJ83257.1| polyprenyl synthetase family protein [Shigella flexneri K-671] gi|332754473|gb|EGJ84839.1| polyprenyl synthetase family protein [Shigella flexneri 2747-71] gi|332765183|gb|EGJ95410.1| octaprenyl-diphosphate synthase [Shigella flexneri 2930-71] gi|332998829|gb|EGK18425.1| polyprenyl synthetase family protein [Shigella flexneri VA-6] gi|332999266|gb|EGK18852.1| polyprenyl synthetase family protein [Shigella flexneri K-272] gi|333000017|gb|EGK19600.1| polyprenyl synthetase family protein [Shigella flexneri K-218] gi|333014533|gb|EGK33880.1| polyprenyl synthetase family protein [Shigella flexneri K-304] gi|333014990|gb|EGK34334.1| polyprenyl synthetase family protein [Shigella flexneri K-227] Length = 323 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|254369351|ref|ZP_04985363.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp. holarctica FSC022] gi|157122301|gb|EDO66441.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp. holarctica FSC022] Length = 325 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N N L A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 44 GGKRLRPLLVILFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ S DN++ Q++ T+ I +L Q+L+ Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224 ++ + E + + KT L ACE +++ Q+ + R++ +G LG FQ+A Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIA 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDVLDYVSD 223 >gi|62260098|gb|AAX77879.1| unknown protein [synthetic construct] Length = 360 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N N L A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 70 GGKRLRPLLVMLFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 127 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ S DN++ Q++ T+ I +L Q+L+ Sbjct: 128 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 180 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224 ++ + E + + KT L ACE +++ Q+ + R++ +G LG FQ+A Sbjct: 181 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIA 240 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 241 DDVLDYVSD 249 >gi|26249771|ref|NP_755811.1| octaprenyl diphosphate synthase [Escherichia coli CFT073] gi|26110199|gb|AAN82385.1|AE016767_145 Octaprenyl-diphosphate synthase [Escherichia coli CFT073] Length = 323 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|88855944|ref|ZP_01130606.1| trans-hexaprenyltranstransferase [marine actinobacterium PHSC20C1] gi|88814811|gb|EAR24671.1| trans-hexaprenyltranstransferase [marine actinobacterium PHSC20C1] Length = 358 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 16/197 (8%) Query: 44 RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 RY L GGK++R L A L + N+ + A+E H SL HDD+ MD +RR Sbjct: 64 RYLLEAGGKRVRPVLTLLTAQLGSGNNANVVTAAQAVEITHLASLYHDDV--MDEAQLRR 121 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ---LKDNIRSQLMLSLTHNIGLQGM 159 G P+ + AI+ G+ L A ++I+ + L+ N +L L H Sbjct: 122 GVPSAQSVWGNSVAILTGDLLFARASKLIAGLGERALILQSNTFERLCLGQLH------- 174 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + T + KTG+L+ A E G + + A +R FGE +G+ Sbjct: 175 ---ETLGPKPGENPVTHYLQVLADKTGSLIATAAEVGVMFSDAPDEYTVPVRDFGEKIGV 231 Query: 220 IFQLADDLLDCEEDLPK 236 FQL DD++D ++ K Sbjct: 232 AFQLIDDVIDLSDETGK 248 >gi|238018911|ref|ZP_04599337.1| hypothetical protein VEIDISOL_00771 [Veillonella dispar ATCC 17748] gi|237864395|gb|EEP65685.1| hypothetical protein VEIDISOL_00771 [Veillonella dispar ATCC 17748] Length = 323 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 14/187 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R+ L A+ +R+ A+E +H +LIHDD+ +D IRRG+ T+H Sbjct: 46 GGKRLRAQLCLLIANAGTSVERQRIRIAEAVEMLHLATLIHDDV--LDQAEIRRGEETIH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI++G+ L AF+I+S I S ++ L G+ + ++ Sbjct: 104 MHKGNKVAILSGDYLFAKAFQIVSEMPNMKYLQIFSHIITCLVE---------GEFMQME 154 Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + ID+ +M + K A C E G ++ S++E L+ +G LG+ FQ+ D Sbjct: 155 DVYRIDQGIDRYMTKTQKKTADFMEGCMELGGLLGGWSESEIVELKKYGHALGMAFQITD 214 Query: 226 DLLDCEE 232 D++D E Sbjct: 215 DIMDYRE 221 >gi|71891880|ref|YP_277610.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795986|gb|AAZ40737.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 323 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + IE IH +L+HDD+ +D ++RRG+ T + Sbjct: 43 GGKRIRPMITLLTARALCYKKTQHVTIATLIEFIHTATLLHDDV--VDKSHMRRGRKTTN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 I + +++ G+ + T AF++++ + S +LSL + + + G++L + Sbjct: 101 IIFGNAASVLVGDFIYTRAFQMMT--------ELESLRILSLMAD-AVNIIAAGEILQLT 151 Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D I I KT L A +S AI+A A+ +++ LR +G +GI FQL D Sbjct: 152 HCNDPTITIDSYMKIIYSKTARLFEVASQSSAILADANTCQEKALRNYGRYMGIAFQLVD 211 Query: 226 DLLD 229 D+LD Sbjct: 212 DVLD 215 >gi|254038351|ref|ZP_04872409.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia sp. 1_1_43] gi|226839975|gb|EEH71996.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia sp. 1_1_43] Length = 340 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 60 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 117 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 118 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 171 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 172 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 231 Query: 229 DCEED 233 D D Sbjct: 232 DYNAD 236 >gi|33151879|ref|NP_873232.1| octaprenyl pyrophosphate synthetase [Haemophilus ducreyi 35000HP] gi|33148100|gb|AAP95621.1| octaprenyl-diphosphate synthase [Haemophilus ducreyi 35000HP] Length = 327 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A+ L A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLIAVLAANALCYTGRKHLTCAAFIEFVHTATLLHDDV--VDESALRRGRETAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S D++ ++S N +G + Q+++I Sbjct: 105 AIFGNAASVLVGDFIYTRSFQMMTSV-----DSLEVLKVMSAATNALAEGEVQ-QLMNIN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+A ASQ ++ L+ +G LG FQL DD+L Sbjct: 159 DPHTTEANYMRVIYNKTARLFEAATQCVAIVAGASQQIEQALKAYGCYLGTAFQLVDDIL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|327333136|gb|EGE74863.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL097PA1] Length = 324 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R LV C+ + VN +R +E H SL HDD+ MD RRG P+ Sbjct: 46 GGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++++ AI+ G+ Y F S +L D ++ Q + T + +QG + Sbjct: 104 NLRWGNSVAIMVGD----YLFSRASLAVAELGVDFVKLQ---ARTFSRLVQGQIAETRGP 156 Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q + D ++ + KTG+L+ + GA+++HAS L FGE++G +FQLAD Sbjct: 157 SQGQ--DPLAHYLKVVADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLAD 214 Query: 226 DLLD 229 DL+D Sbjct: 215 DLID 218 >gi|331664800|ref|ZP_08365705.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA143] gi|331058048|gb|EGI30030.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA143] Length = 323 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|301644900|ref|ZP_07244870.1| polyprenyl synthetase [Escherichia coli MS 146-1] gi|301076794|gb|EFK91600.1| polyprenyl synthetase [Escherichia coli MS 146-1] Length = 320 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|170683435|ref|YP_001745459.1| octaprenyl diphosphate synthase [Escherichia coli SMS-3-5] gi|170521153|gb|ACB19331.1| octaprenyl-diphosphate synthase [Escherichia coli SMS-3-5] Length = 323 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|121602666|ref|YP_988702.1| polyprenyl synthetase [Bartonella bacilliformis KC583] gi|120614843|gb|ABM45444.1| polyprenyl synthetase [Bartonella bacilliformis KC583] Length = 338 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMITLAAAHMFGYQGDEHIKLATAVEFMHTATLLHDDV--VDESNLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+I+ ++ I S + +Q + + Sbjct: 115 MIWGNQASVLVGDFLLGQAFKIMVDARSMEALAILSNAAAVIAEGEVMQLAAANNIEN-- 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + I KT AL A E G I+A E+ LR +G +LG+ FQL DD L Sbjct: 173 ----DISNYLKIINAKTAALFSAAAEVGPIIAGYGCEERSALRKYGTSLGLAFQLIDDAL 228 Query: 229 DCEED 233 D D Sbjct: 229 DYSGD 233 >gi|288800531|ref|ZP_06405989.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 299 str. F0039] gi|288332744|gb|EFC71224.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 299 str. F0039] Length = 325 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 10/201 (4%) Query: 34 QHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 +H D LLS + + GK++R L+ A F +E +H SL+HDD Sbjct: 27 EHQDGLLSQVLMFIKQRSGKRMRPMLMLLVAKAFGRVSEVTQHAAIGLELLHTASLVHDD 86 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D RRG+ +V+ YD A++ G+ +L+ A +S + D I S L L Sbjct: 87 V--VDESGERRGQASVNAFYDNKVAVLVGDYILSTALLHVSFTSS---DRIVSGLA-ELG 140 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + +L Q+ +I ++ I E + + K KT AL E GA+ AS+++ E+ R Sbjct: 141 RTLSDGEIL--QLENISNQTISEEAYYEVIKRKTAALFEACTEIGALSVGASKDDVEQAR 198 Query: 212 CFGENLGIIFQLADDLLDCEE 232 FG +LG+ FQ+ DD+ D E Sbjct: 199 LFGLHLGMAFQIRDDIFDYYE 219 >gi|50549037|ref|XP_501989.1| YALI0C18755p [Yarrowia lipolytica] gi|60389562|sp|Q6CBH3|COQ1_YARLI RecName: Full=Probable hexaprenyl pyrophosphate synthase, mitochondrial; Short=HPS; Flags: Precursor gi|49647856|emb|CAG82309.1| YALI0C18755p [Yarrowia lipolytica] Length = 452 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 91/168 (54%), Gaps = 20/168 (11%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ +E IH SL+HDD+ +DN RRG PT ++ + AI+AG+ LL A I+ Sbjct: 195 RLAEIVEMIHTASLLHDDV--IDNSATRRGSPTGNVAFGNKMAILAGDFLLGRASVAIA- 251 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-------FMIQK--MK 184 +L++ +L+ + N ++ G+ + +++ +D +++ + I K +K Sbjct: 252 ---RLRNAEVIELLSTTIAN-----LVEGEFMQLKNTIVDNSEIANKATFEYYIHKTYLK 303 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T +LM +C + A+++ A + FG+NLG+ FQ+ DD+LD E Sbjct: 304 TASLMSKSCRAAAVLSGARNPIVDASYKFGKNLGLCFQVVDDMLDYSE 351 >gi|295097675|emb|CBK86765.1| Geranylgeranyl pyrophosphate synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 323 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAILAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A S+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCSEAQEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|239927463|ref|ZP_04684416.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672] Length = 342 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + T + A+E +H +SL+HDDL MD RR + TV Sbjct: 51 GGKAVRPALAVLSAEVTGAAPQTGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T D R+ L+ + ++ GQ DI Sbjct: 109 KVHGPAQAILVGDALFALANEVLLELGT--VDAGRAARRLTTAS----RALIDGQAQDIS 162 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + + L +G +LG+ FQ D Sbjct: 163 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADSLEKYGYHLGLAFQAVD 222 Query: 226 DLL 228 DLL Sbjct: 223 DLL 225 >gi|187931635|ref|YP_001891619.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712544|gb|ACD30841.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] Length = 325 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N N L A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 44 GGKRLRPLLVMLFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ S DN++ Q++ T+ I +L Q+L+ Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224 ++ + E + + KT L ACE +++ Q+ + R++ +G LG FQ+A Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIA 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDVLDYVSD 223 >gi|126458776|ref|YP_001055054.1| polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548] gi|126248497|gb|ABO07588.1| Polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548] Length = 334 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 34/208 (16%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + AL A +E IH YSLI+DD+ +D G +RRG PTV Sbjct: 42 GGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVR 99 Query: 109 IQYDEVTAIIAGNGLLTY--AFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + + AI+ G + Y A E ++ +PK L ++++ ++ G+ Sbjct: 100 KAFGDNAAILVG---IWYREAIEEAVLDTPKPTLFAKEVAEVIKAIDE---------GER 147 Query: 165 LDIQDEFIDETQVFMIQ---------------KMKTGALMCFACESGAIMAHASQNEKER 209 LDI E + + +Q +KTGAL+ A + G + + E Sbjct: 148 LDILFEAAGRSDPYFVQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSVSDDRGLAEA 207 Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPKK 237 FG G+ FQ+ DD+LD D PKK Sbjct: 208 AWNFGMAAGVAFQIIDDVLDIYGD-PKK 234 >gi|56708131|ref|YP_170027.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670602|ref|YP_667159.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis FSC198] gi|134301942|ref|YP_001121911.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|208779313|ref|ZP_03246659.1| polyprenyl synthetase family protein [Francisella novicida FTG] gi|224457222|ref|ZP_03665695.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254370617|ref|ZP_04986622.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874931|ref|ZP_05247641.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|56604623|emb|CAG45677.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320935|emb|CAL09060.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis FSC198] gi|134049719|gb|ABO46790.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151568860|gb|EDN34514.1| hypothetical protein FTBG_00405 [Francisella tularensis subsp. tularensis FSC033] gi|208745113|gb|EDZ91411.1| polyprenyl synthetase family protein [Francisella novicida FTG] gi|254840930|gb|EET19366.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159332|gb|ADA78723.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis NE061598] Length = 325 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N N L A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 44 GGKRLRPLLVMLFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ S DN++ Q++ T+ I +L Q+L+ Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224 ++ + E + + KT L ACE +++ Q+ + R++ +G LG FQ+A Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIA 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDVLDYVSD 223 >gi|91212610|ref|YP_542596.1| octaprenyl diphosphate synthase [Escherichia coli UTI89] gi|110643427|ref|YP_671157.1| octaprenyl diphosphate synthase [Escherichia coli 536] gi|117625480|ref|YP_858803.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1] gi|191174477|ref|ZP_03035977.1| octaprenyl-diphosphate synthase [Escherichia coli F11] gi|218560257|ref|YP_002393170.1| octaprenyl diphosphate synthase [Escherichia coli S88] gi|218691477|ref|YP_002399689.1| octaprenyl diphosphate synthase [Escherichia coli ED1a] gi|227887908|ref|ZP_04005713.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972] gi|300980004|ref|ZP_07174826.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|300990877|ref|ZP_07179365.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|301047968|ref|ZP_07195012.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|331659474|ref|ZP_08360416.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA206] gi|91074184|gb|ABE09065.1| octaprenyl diphosphate synthase [Escherichia coli UTI89] gi|110345019|gb|ABG71256.1| octaprenyl-diphosphate synthase [Escherichia coli 536] gi|115514604|gb|ABJ02679.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1] gi|190905232|gb|EDV64871.1| octaprenyl-diphosphate synthase [Escherichia coli F11] gi|218367026|emb|CAR04797.1| octaprenyl diphosphate synthase [Escherichia coli S88] gi|218429041|emb|CAR09987.2| octaprenyl diphosphate synthase [Escherichia coli ED1a] gi|227835304|gb|EEJ45770.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972] gi|294490790|gb|ADE89546.1| octaprenyl-diphosphate synthase [Escherichia coli IHE3034] gi|300300164|gb|EFJ56549.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|300307867|gb|EFJ62387.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|300407044|gb|EFJ90582.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|307555280|gb|ADN48055.1| octaprenyl-diphosphate synthase [Escherichia coli ABU 83972] gi|307625214|gb|ADN69518.1| octaprenyl diphosphate synthase [Escherichia coli UM146] gi|315288960|gb|EFU48358.1| polyprenyl synthetase [Escherichia coli MS 110-3] gi|315294881|gb|EFU54220.1| polyprenyl synthetase [Escherichia coli MS 153-1] gi|315297896|gb|EFU57166.1| polyprenyl synthetase [Escherichia coli MS 16-3] gi|323951294|gb|EGB47169.1| polyprenyl synthetase [Escherichia coli H252] gi|323957666|gb|EGB53380.1| polyprenyl synthetase [Escherichia coli H263] gi|324008745|gb|EGB77964.1| polyprenyl synthetase [Escherichia coli MS 57-2] gi|324012137|gb|EGB81356.1| polyprenyl synthetase [Escherichia coli MS 60-1] gi|331054056|gb|EGI26085.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA206] Length = 323 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|187730997|ref|YP_001881898.1| octaprenyl diphosphate synthase [Shigella boydii CDC 3083-94] gi|187427989|gb|ACD07263.1| octaprenyl-diphosphate synthase [Shigella boydii CDC 3083-94] Length = 323 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|291086510|ref|ZP_06571551.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220] gi|291067630|gb|EFE05739.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220] Length = 498 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 218 GGKRIRPMIAVLAARAVGYQENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 275 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 276 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 329 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A S +++ L+ +G LG FQL DDLL Sbjct: 330 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCSAEQEKGLQDYGRYLGTAFQLIDDLL 389 Query: 229 DCEED 233 D D Sbjct: 390 DYSAD 394 >gi|258512777|ref|YP_003186211.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479503|gb|ACV59822.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 337 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 14/194 (7%) Query: 51 KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110 K++R L+ + + AL AIE +H +SLIHDD+ D +RRG+ ++ Sbjct: 55 KRVRPLLLLTAHAALGGDWRAALPAAVAIEYVHGFSLIHDDIE--DRSPLRRGRASLWAV 112 Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--GLQGMLGGQMLDI- 167 + A+ AG+ L AF ++ L D+ ++ ++ + + GQ LD+ Sbjct: 113 WGVDRALNAGDALFALAFRVMGD----LADHFDARWVVETYQAMTDACIALSAGQELDLA 168 Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q E + Q + ++KTGAL A E AI+A + ++ LR G LG++FQ+ D Sbjct: 169 FEQVENVSIEQYLAMAELKTGALFGAALEVAAILAGQPPSVRDDLRNAGRKLGVLFQILD 228 Query: 226 DLLDC---EEDLPK 236 D D EEDL K Sbjct: 229 DFHDLFGREEDLGK 242 >gi|150017812|ref|YP_001310066.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052] gi|149904277|gb|ABR35110.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052] Length = 275 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 16/192 (8%) Query: 50 GKKIRSFLVTECASLFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GK +R L+ A N + + + AIE IH SL+HDD+ +DN RRG+ Sbjct: 46 GKYLRPSLIILSAKAINPEMTIDERMKLINLCVAIELIHSASLVHDDI--IDNDLFRRGQ 103 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T++ Y A++AG+ AF I+ T + I +Q+ ++ M ++ Sbjct: 104 KTLNNIYGRKIAVLAGDAFYAKAFSILLKLPTNDAEQIITQV---------IEKMCVAEI 154 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q+ I + F I + KT + M C+ GA +A + E E L +G NLG+++Q+ Sbjct: 155 EQAQNHEITKQDYFNIIEGKTASFMAACCKLGAKTVNAKEEEIEALENYGLNLGMLYQII 214 Query: 225 DDLLDCEEDLPK 236 DD D + + K Sbjct: 215 DDCTDGDSNATK 226 >gi|150003776|ref|YP_001298520.1| octaprenyl-diphosphate synthase [Bacteroides vulgatus ATCC 8482] gi|254880992|ref|ZP_05253702.1| octaprenyl-diphosphate synthase [Bacteroides sp. 4_3_47FAA] gi|294777401|ref|ZP_06742852.1| polyprenyl synthetase [Bacteroides vulgatus PC510] gi|319640000|ref|ZP_07994727.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_40A] gi|149932200|gb|ABR38898.1| octaprenyl-diphosphate synthase [Bacteroides vulgatus ATCC 8482] gi|254833785|gb|EET14094.1| octaprenyl-diphosphate synthase [Bacteroides sp. 4_3_47FAA] gi|294448469|gb|EFG17018.1| polyprenyl synthetase [Bacteroides vulgatus PC510] gi|317388278|gb|EFV69130.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_40A] Length = 324 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 20/186 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A LF + + L ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILALLIAKLFGEINDSTLHAALSLELLHTASLVHDDV--VDESDKRRGQSSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI 167 Y+ +++ G+ +L T LK + R ++ L +G Q + G+++ + Sbjct: 103 IYNNKVSVLVGDYMLA----------TSLKHSAMTREITIVDLVACLG-QNLSEGEIIQL 151 Query: 168 QD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + EF +E +I+K KT AL + E+GAI HAS + R FGE +GI FQ+ Sbjct: 152 ANINASEFSEEVYYDVIRK-KTAALFTASAEAGAISVHASDEMVKNARLFGEMIGIAFQI 210 Query: 224 ADDLLD 229 DD+ D Sbjct: 211 KDDIFD 216 >gi|193065379|ref|ZP_03046450.1| octaprenyl-diphosphate synthase [Escherichia coli E22] gi|260846000|ref|YP_003223778.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str. 12009] gi|192927020|gb|EDV81643.1| octaprenyl-diphosphate synthase [Escherichia coli E22] gi|257761147|dbj|BAI32644.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str. 12009] gi|323162879|gb|EFZ48714.1| polyprenyl synthetase family protein [Escherichia coli E128010] Length = 323 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|157162671|ref|YP_001459989.1| octaprenyl diphosphate synthase [Escherichia coli HS] gi|157068351|gb|ABV07606.1| octaprenyl-diphosphate synthase [Escherichia coli HS] Length = 323 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVISEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|237706062|ref|ZP_04536543.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia sp. 3_2_53FAA] gi|226899102|gb|EEH85361.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia sp. 3_2_53FAA] Length = 340 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 60 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 117 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 118 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 171 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 172 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 231 Query: 229 DCEED 233 D D Sbjct: 232 DYNAD 236 >gi|119897305|ref|YP_932518.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72] gi|119669718|emb|CAL93631.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72] Length = 341 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A R+ A +E IH +L+HDD+ +D +RRG T + Sbjct: 62 GGKRLRPALVLFSAGAVGYRGTQHHRLAAVVEFIHTSTLLHDDV--VDESELRRGNKTAN 119 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AF+++ D++R +L+ NI +G + Q+L+ Sbjct: 120 ALFGNAASVLVGDFLYTRAFQMMVE-----VDSMRVMQILADATNIIAEGEVL-QLLNCH 173 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + ++ + + KT L A GA++ A +E + FG +LG FQL DD+L Sbjct: 174 NADVEVEDYLRVIRYKTAKLFEAASRLGAVLGGADPALEESMAAFGMHLGTAFQLIDDVL 233 Query: 229 DCEED 233 D D Sbjct: 234 DYSAD 238 >gi|75676776|ref|YP_319197.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255] gi|74421646|gb|ABA05845.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255] Length = 336 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L +++ A++E +H +L+HDD+ +D +RRG+ + Sbjct: 55 GGKRLRPMLTLAMANLAGYAGEGHVKLAASVEFMHTATLLHDDV--VDESELRRGRLSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +I S ++ +Q + Sbjct: 113 MVWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTE 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE++ + + KT L ACE G ++ + E+ FG NLGI FQL DD+L Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPVLGGRPKAEQTAAASFGMNLGIAFQLVDDVL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|257487512|ref|ZP_05641553.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 322 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L +++ T I +L Q+ I+ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMRILSKATRIIAEGEVL--QLSKIR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + +A + + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|241763806|ref|ZP_04761852.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN] gi|241366938|gb|EER61343.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN] Length = 309 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 98/183 (53%), Gaps = 12/183 (6%) Query: 49 GGKKIR-SFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R + L+ C +L + NH +L A +E IH +L+HDD+ +D +RRG+ T Sbjct: 30 GGKRLRPALLLLICGALGYRGNHRFSL--AAVVELIHTATLLHDDV--VDASTLRRGRAT 85 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + + +++ G+ L T +F+++ N+R +LS N+ +G + Q+++ Sbjct: 86 ANQTFGNPASVLVGDFLHTRSFQMMVE-----AGNMRIMEVLSEATNVIAEGEVL-QLMN 139 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + D +DE + + KT L + GAI+A + +E +G+ LG FQ+ DD Sbjct: 140 MHDASLDEAGYLQVIRSKTAKLFEASARLGAILAESPPQIEEACATYGQALGTAFQIIDD 199 Query: 227 LLD 229 +LD Sbjct: 200 VLD 202 >gi|319775186|ref|YP_004137674.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047] gi|317449777|emb|CBY85984.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047] Length = 329 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL ++++ +++ N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220 Query: 229 D 229 D Sbjct: 221 D 221 >gi|301169600|emb|CBW29201.1| octaprenyl diphosphate synthase [Haemophilus influenzae 10810] Length = 329 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL ++++ +++ N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220 Query: 229 D 229 D Sbjct: 221 D 221 >gi|212692554|ref|ZP_03300682.1| hypothetical protein BACDOR_02051 [Bacteroides dorei DSM 17855] gi|237709128|ref|ZP_04539609.1| octaprenyl-diphosphate synthase [Bacteroides sp. 9_1_42FAA] gi|237724389|ref|ZP_04554870.1| octaprenyl-diphosphate synthase [Bacteroides sp. D4] gi|265752655|ref|ZP_06088224.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_33FAA] gi|212664839|gb|EEB25411.1| hypothetical protein BACDOR_02051 [Bacteroides dorei DSM 17855] gi|229437258|gb|EEO47335.1| octaprenyl-diphosphate synthase [Bacteroides dorei 5_1_36/D4] gi|229456824|gb|EEO62545.1| octaprenyl-diphosphate synthase [Bacteroides sp. 9_1_42FAA] gi|263235841|gb|EEZ21336.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_33FAA] Length = 324 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 20/186 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A LF + + L ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILALLIAKLFGEINDSTLHAALSLELLHTASLVHDDV--VDESDKRRGQSSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI 167 Y+ +++ G+ +L T LK + R ++ L +G Q + G+++ + Sbjct: 103 IYNNKVSVLVGDYMLA----------TSLKHSAMTREITIVDLVACLG-QNLSEGEIIQL 151 Query: 168 QD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + EF +E +I+K KT AL + E+GAI HAS + R FGE +GI FQ+ Sbjct: 152 ANINASEFSEEVYYDVIRK-KTAALFTASAEAGAISVHASDEMVKNARLFGEMIGIAFQI 210 Query: 224 ADDLLD 229 DD+ D Sbjct: 211 KDDIFD 216 >gi|16272821|ref|NP_439042.1| octaprenyl-diphosphate synthase [Haemophilus influenzae Rd KW20] gi|260579972|ref|ZP_05847802.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae RdAW] gi|1170590|sp|P44916|ISPB_HAEIN RecName: Full=Octaprenyl-diphosphate synthase; AltName: Full=All-trans-octaprenyl-diphosphate synthase; AltName: Full=Octaprenyl pyrophosphate synthase; Short=OPP synthase gi|1573899|gb|AAC22540.1| octaprenyl-diphosphate synthase (ispB) [Haemophilus influenzae Rd KW20] gi|260093256|gb|EEW77189.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae RdAW] gi|309751451|gb|ADO81435.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2866] Length = 329 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL ++++ +++ N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220 Query: 229 D 229 D Sbjct: 221 D 221 >gi|303238014|ref|ZP_07324557.1| polyprenyl synthetase [Prevotella disiens FB035-09AN] gi|302481804|gb|EFL44856.1| polyprenyl synthetase [Prevotella disiens FB035-09AN] Length = 325 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A F A +E +H SL+HDD+ +D RRG+ +++ Sbjct: 44 GGKRMRPLLMLLMAKNFGEVTFVAQHAAIGLELLHTASLVHDDV--VDESVQRRGQASMN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y+ A++ G+ +L+ A +++ TQ D +R L T + G +L Q+ +I Sbjct: 102 ATYNNKVAVLVGDYILSTA--LLNVAYTQSDDIVRDLAELGRTLSNG--EIL--QLTNIS 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 ++ I E + + KT AL GA AS+ E R FG+ +GIIFQ+ DD+ Sbjct: 156 NQEISEEVYYQVINQKTAALFEACAVIGAKAGRASEEAIEAARLFGQRIGIIFQIRDDIF 215 Query: 229 D 229 D Sbjct: 216 D 216 >gi|253998223|ref|YP_003050286.1| trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4] gi|253984902|gb|ACT49759.1| Trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4] Length = 322 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A F + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPALVLLSAGAFGEVNARHHELAAVVEFIHTATLLHDDV--VDESAMRRGRATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + + AF+++ ++ +R +L+ NI +G + Q+L++ Sbjct: 101 TLFGNAASVLVGDFIYSRAFQMMVGVES-----MRVMEVLAEATNIIAEGEVL-QLLNVH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I + + KT L A GAI+ AS+ +++ + +G LG FQL DD+L Sbjct: 155 DADITDEAYLKVIHYKTAKLFEAATRLGAIICAASEQDEQAMAEYGMRLGTAFQLIDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DFSGD 219 >gi|261493062|ref|ZP_05989602.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496350|ref|ZP_05992745.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307994|gb|EEY09302.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311282|gb|EEY12445.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 335 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + A IE +H +L+HDD+ +D +RRG+PT + Sbjct: 51 GGKRIRPLIAVLAARALGYRGKKHITAAAFIEFVHTATLLHDDV--VDESDMRRGRPTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++R ++S N +G + Q++++ Sbjct: 109 AHFGNAASVLVGDFIYTRSFQMMTD-----LDSLRVLKVMSAATNALAEGEVQ-QLMNVN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+A AS+ + L+ +G LG FQL DD+L Sbjct: 163 DPNTTEANYMRVIYNKTARLFEAATQCVAIVADASEEIETALKNYGCYLGTAFQLIDDIL 222 Query: 229 D 229 D Sbjct: 223 D 223 >gi|68249468|ref|YP_248580.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP] gi|329122893|ref|ZP_08251464.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116] gi|68057667|gb|AAX87920.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP] gi|327471824|gb|EGF17264.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116] Length = 329 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL ++++ +++ N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220 Query: 229 D 229 D Sbjct: 221 D 221 >gi|289625167|ref|ZP_06458121.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651351|ref|ZP_06482694.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi str. 2250] gi|298485383|ref|ZP_07003473.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160081|gb|EFI01112.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330869163|gb|EGH03872.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330988777|gb|EGH86880.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 322 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L +++ T I +L Q+ I+ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMRILSKATRIIAEGEVL--QLSKIR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + +A + + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|254439584|ref|ZP_05053078.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] gi|198255030|gb|EDY79344.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] Length = 332 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 9/200 (4%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 M ++H R+ + + GGK++R L A + + + + A +E IH +L+H Sbjct: 33 MASKHAPRIPEVTAHLVGAGGKRLRPMLTLAAAKMCGYSGPYHVHLAATVEFIHTATLLH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG+PT ++ +D ++++ G+ L +F+++ + +I + + Sbjct: 93 DDV--VDESAQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDILANASAT 150 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + LQ + D E I + KT AL A E G ++A E Sbjct: 151 IAEGEVLQ------LTAASDLATTEAIYLQIVRGKTAALFSAAMEVGGVIAGQDAALVEA 204 Query: 210 LRCFGENLGIIFQLADDLLD 229 L +G+ LGI FQ+ DDLLD Sbjct: 205 LYDYGDALGIGFQIVDDLLD 224 >gi|86739535|ref|YP_479935.1| polyprenyl synthetase [Frankia sp. CcI3] gi|86566397|gb|ABD10206.1| Polyprenyl synthetase [Frankia sp. CcI3] Length = 338 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 11/188 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A T L A+E +H +SL+HDDL MD RR +PT Sbjct: 53 GGKLVRPALALLSAQAAGAPAETGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+AG+ LL A +++ + + + R+ L+L G+Q ++ GQ D+ Sbjct: 111 TIFGADGAILAGDALLGLATQVLL--EVEGEPGRRAALIL----GAGVQDLVRGQAEDLM 164 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ + GA++A A + L +G LG FQL D Sbjct: 165 FEKRSDVSVAETLHMEDGKTGALLACSASLGAVLAGAGDDMVNALAEYGSRLGTAFQLID 224 Query: 226 DLLDCEED 233 DLL D Sbjct: 225 DLLGIWGD 232 >gi|170783303|ref|YP_001711637.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis subsp. sepedonicus] gi|169157873|emb|CAQ03081.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis subsp. sepedonicus] Length = 325 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 17/198 (8%) Query: 44 RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 RY L GGK++R L A L N + AIE H SL HDD+ MD +RR Sbjct: 32 RYLLDAGGKRVRPMLALLIAQLGEGNTQQVVDAAVAIEITHLASLYHDDV--MDEADMRR 89 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKT-QLKDNIRSQLMLSLTHNIGLQGM 159 G P+ + AI+AG+ L A +I++ P+ +L+ +L+L H G Sbjct: 90 GVPSAQAVWGNSVAILAGDLLFARASKIVADLGPRAIRLQAATFERLVLGQLHET--IGP 147 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 GQ D + ++D + KTG+L+ A + G I + A + + FGE G+ Sbjct: 148 REGQ--DPIEHYLD------VLADKTGSLIACAAQMGVIYSGADPELESAVLAFGERTGV 199 Query: 220 IFQLADDLLDCEEDLPKK 237 FQL DD+LD D P++ Sbjct: 200 AFQLVDDVLDL-ADQPEE 216 >gi|71735497|ref|YP_273004.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556050|gb|AAZ35261.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 322 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L +++ T I +L Q+ I+ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMRILSKATRIIAEGEVL--QLSKIR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + +A + + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|297518736|ref|ZP_06937122.1| octaprenyl diphosphate synthase [Escherichia coli OP50] Length = 286 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 6 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 63 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 64 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 117 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 118 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 177 Query: 229 DCEED 233 D D Sbjct: 178 DYNAD 182 >gi|255945077|ref|XP_002563306.1| Pc20g07830 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588041|emb|CAP86112.1| Pc20g07830 [Penicillium chrysogenum Wisconsin 54-1255] Length = 447 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 87/162 (53%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++ + A++AG+ +L A ++ Sbjct: 189 RLAEITELIHTASLLHDDV--IDNAVTRRANSSANLAFGNKMAVLAGDFMLGRASVALA- 245 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187 +L+D ++LM ++ N+ ++G QDE + DET + +QK +KT + Sbjct: 246 ---RLRDPEVTELMATVIANL-VEGEFMQLKNTAQDESKPVYTDETLSYYLQKTYLKTAS 301 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C S A++ ++ E +G NLG+ FQL DD+LD Sbjct: 302 LISKSCRSAAVLGRSAPEVIEASYAYGRNLGLAFQLVDDMLD 343 >gi|115402649|ref|XP_001217401.1| decaprenyl-diphosphate synthase subunit 1 [Aspergillus terreus NIH2624] gi|114189247|gb|EAU30947.1| decaprenyl-diphosphate synthase subunit 1 [Aspergillus terreus NIH2624] Length = 449 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 21/169 (12%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T R+ E IH SL+HDD+ +DN RR + ++Q+ A++AG+ LL A Sbjct: 188 TQRRLAEITELIHTASLLHDDV--IDNAVTRRSSSSANLQFGNKMAVLAGDFLLGRASVA 245 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE----FIDETQVFMIQK 182 ++ +L+D ++L+ ++ N ++ G+ + ++ DE F DET + +QK Sbjct: 246 LA----RLRDPEVTELLATVIAN-----LVEGEFMQLKNTAADEKHPVFTDETIEYYLQK 296 Query: 183 --MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KT +L+ +C + A++ ++ E +G NLG+ FQL DD+LD Sbjct: 297 TYLKTASLISKSCRAAALLGDSTPEVVESAYAYGRNLGLAFQLVDDMLD 345 >gi|302522954|ref|ZP_07275296.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78] gi|302431849|gb|EFL03665.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78] Length = 377 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + T + A+E +H +SL+HDDL MD RR + TV Sbjct: 81 GGKAVRPALALISAEVTGASAETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 138 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A EI+ +L + LT + ++ GQ DI Sbjct: 139 KVHGPAQAILVGDALFALANEIL----LELGTPEAGRATRRLTR--ATRALIDGQAQDIS 192 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + + L +G +LG+ FQ D Sbjct: 193 YEHRDRVTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVD 252 Query: 226 DLL 228 DLL Sbjct: 253 DLL 255 >gi|320326220|gb|EFW82274.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea str. B076] gi|320330645|gb|EFW86622.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330881372|gb|EGH15521.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330891602|gb|EGH24263.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. mori str. 301020] Length = 322 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L +++ T I +L Q+ I+ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMRILSKATRIIAEGEVL--QLSKIR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + +A + + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|224823689|ref|ZP_03696798.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] gi|224604144|gb|EEG10318.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] Length = 360 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 81 GGKRLRPVLTLLAGKALDYRGEHLHELAAMIEFIHTATLLHDDV--VDESELRRGRETAN 138 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AF+++ + + N+ +++ NI +G + Q+L+I Sbjct: 139 ALFGNAASVLVGDFLYTRAFQMMVTTR-----NMAILEVMAEATNIIAEGEVL-QLLNIG 192 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + E Q + + KT L A GA++A AS +++ L +G +LG FQ+ DD+L Sbjct: 193 NTDVTEAQYLQVIQYKTAKLFEAASRVGALIAAASPEQEKALADYGMHLGTAFQIIDDVL 252 Query: 229 DCEED 233 D D Sbjct: 253 DYSGD 257 >gi|145638300|ref|ZP_01793910.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittII] gi|145272629|gb|EDK12536.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittII] Length = 323 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL ++++ +++ N+ +G + Q++++ Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 155 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|315081026|gb|EFT53002.1| polyprenyl synthetase [Propionibacterium acnes HL078PA1] Length = 324 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R LV C+ + VN +R +E H SL HDD+ MD RRG P+ Sbjct: 46 GGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++++ AI+ G+ Y F S +L D ++ Q + T + +QG + Sbjct: 104 NLRWGNSVAIMVGD----YLFSKASLAVAELGVDFVKLQ---ARTFSRLVQGQIAETRGP 156 Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q + D ++ + KTG+L+ + GA+++HAS L FGE++G +FQLAD Sbjct: 157 SQGQ--DPLAHYLKVVADKTGSLIAASAIFGAMVSHASAENVAALEQFGEDIGEVFQLAD 214 Query: 226 DLLD 229 DL+D Sbjct: 215 DLID 218 >gi|302877611|ref|YP_003846175.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] gi|302580400|gb|ADL54411.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] Length = 320 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A FN + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 41 GGKRLRPALVVLSAHAFNYTGEHHHELAAVVEFIHTATLLHDDV--VDESGLRRGRETAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ + +R L+ N+ +G + Q+L+ Sbjct: 99 ALFGNAASVLVGDFLYSRAFQMMVEVGS-----MRVMQTLADATNVIAEGEVL-QLLNCN 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +D + KT L A GAI+A S ++ +G +LG FQL DD+L Sbjct: 153 DADVDAENYMRVIHYKTAKLFEAAMRLGAILAKTSSEDEAAAATYGMHLGTAFQLIDDVL 212 Query: 229 DCEED 233 D D Sbjct: 213 DYSAD 217 >gi|189425336|ref|YP_001952513.1| polyprenyl synthetase [Geobacter lovleyi SZ] gi|189421595|gb|ACD95993.1| Polyprenyl synthetase [Geobacter lovleyi SZ] Length = 322 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR ++ A L A+ + + +E IH +L+HDD+ +D+ +RRG + + Sbjct: 41 GGKRIRPAMLLLAARLCEYQGNQAIPLASVVEFIHTATLLHDDV--VDSATLRRGLASAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F ++ + + + S+ + LQ + G++ + Sbjct: 99 TLWGNEASVLIGDFLFSKSFSLMVAAGSLDVLRVMSKATTVIAEGEVLQLLYTGEVELTE 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 ++I+ + + KT L+ AC+ GAI+ S +++ L FG LGI FQL DD+L Sbjct: 159 QQYIE------VVRAKTAVLLSAACQCGAILGGVSPEQEQALADFGMELGIAFQLMDDIL 212 Query: 229 D---CEEDLPK 236 D EE+ K Sbjct: 213 DYTASEEEFGK 223 >gi|148556350|ref|YP_001263932.1| polyprenyl synthetase [Sphingomonas wittichii RW1] gi|148501540|gb|ABQ69794.1| Polyprenyl synthetase [Sphingomonas wittichii RW1] Length = 341 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L CA L + ++ A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 60 GGKRMRPMLTLACAKLLDYAGERHHKLAATVEFIHTATLLHDDV--VDQSGLRRGRSTAN 117 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ L + +FE++ ++R +LS + +G + Q+ + Sbjct: 118 MIWGNAASVLVGDFLFSRSFELMVE-----DGSLRVLRILSNASAVIAEGEVN-QLTAQR 171 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E + I KT L AC A++A +E L +G LGI FQL DD++ Sbjct: 172 RIETSEERYLEIIAAKTAVLFAAACRIAAVVAEREPAVEEALDQYGRYLGIAFQLVDDVI 231 Query: 229 DCEED 233 D D Sbjct: 232 DYVSD 236 >gi|145629957|ref|ZP_01785739.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021] gi|145634043|ref|ZP_01789754.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA] gi|145636989|ref|ZP_01792653.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittHH] gi|145641936|ref|ZP_01797510.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae R3021] gi|148828062|ref|YP_001292815.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG] gi|229844760|ref|ZP_04464899.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1] gi|144984238|gb|EDJ91661.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021] gi|145268487|gb|EDK08480.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA] gi|145269847|gb|EDK09786.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittHH] gi|145273415|gb|EDK13287.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae 22.4-21] gi|148719304|gb|ABR00432.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG] gi|229812474|gb|EEP48164.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1] Length = 323 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL ++++ +++ N+ +G + Q++++ Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 155 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|124026920|ref|YP_001012240.1| geranylgeranyl pyrophosphate synthase, IspA [Hyperthermus butylicus DSM 5456] gi|123977614|gb|ABM79895.1| Geranylgeranyl pyrophosphate synthase, IspA [Hyperthermus butylicus DSM 5456] Length = 312 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 27/229 (11%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 L E+ K++ +++DD + Q + + H R+ Y GGK+ R FLV E A Sbjct: 11 LVEHWKKLRSLVDDAIKQWIARLPEAHAVRVAE---YIARGGKRFRGFLVLEIARSLGGR 67 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AL A+E IH SL DD+ +D RRG+ ++Y ++ L+T+A Sbjct: 68 IEDALDAAVAVELIHASSLALDDI--IDEDVERRGQKAAWVEYGVKKTVMTVYLLVTFAH 125 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-------IQDEFIDETQVFMIQ 181 +I+ + + R+ ++ T NI G++LD + E+ ET Sbjct: 126 KIVEE-RYGFRATSRT---ITATLNISR-----GEVLDAFTDPDSLPPEYYLET-----V 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 K+KT +L A E GAI+A ++ +GE LG+++Q+ADD++D Sbjct: 172 KLKTASLFRLAGELGAIVA-GREDLYGEAGLYGEYLGLMYQVADDIVDS 219 >gi|257069301|ref|YP_003155556.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM 4810] gi|256560119|gb|ACU85966.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM 4810] Length = 335 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 21/191 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV ASL +++ +E H SL HDD+ MD+ RRG + H Sbjct: 52 GGKRVRPMLVLLAASLGDIDADGVQDAAVLVELTHLASLYHDDV--MDSAPTRRGTDSAH 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 + AI+ G+ L A + + T D +R H+ + + GQ+ + Sbjct: 110 ALWGNNVAILTGDFLFARASGLSARIGT---DAVRE-------HSETFERLCLGQLHETV 159 Query: 168 -----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D F + KT +L+ A GA ++ A Q + +R +GE +G+ FQ Sbjct: 160 GPKPGDDPF---AHYISVLSDKTASLLALAGSLGASLSGAPQGSADVMRRYGEKVGVAFQ 216 Query: 223 LADDLLDCEED 233 LADD+LD E D Sbjct: 217 LADDVLDLESD 227 >gi|145245453|ref|XP_001394994.1| hexaprenyl pyrophosphate synthase [Aspergillus niger CBS 513.88] gi|134079694|emb|CAK97120.1| unnamed protein product [Aspergillus niger] Length = 450 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 92/169 (54%), Gaps = 21/169 (12%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T R+ E IH SL+HDD+ +DN RR + ++Q+ A++AG+ +L A Sbjct: 189 TQRRLAEITELIHTASLLHDDV--IDNAVSRRSLTSANLQFGNKMAVLAGDFMLGRASVA 246 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE----FIDETQVFMIQK 182 ++ +L+D +LM ++ N ++ G+ + ++ DE F D+T + +QK Sbjct: 247 LA----RLRDPEVIELMSTVITN-----LVEGEFMQLKNTAADEKNPVFTDDTLSYYLQK 297 Query: 183 --MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KTG+L+ +C S A++ H++ E +G NLG+ FQL DD+LD Sbjct: 298 TYLKTGSLISKSCRSTAVLGHSAPEVVEASYQYGRNLGLAFQLVDDMLD 346 >gi|319795463|ref|YP_004157103.1| polyprenyl synthetase [Variovorax paradoxus EPS] gi|315597926|gb|ADU38992.1| Polyprenyl synthetase [Variovorax paradoxus EPS] Length = 330 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 14/209 (6%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 L T + +Q + ++SA GGK++R L+ + + A +E IH Sbjct: 33 LDTGVPLVSQVSQYIISA------GGKRLRPALLLLMSGALGYTGEQRFNLAAVVEFIHT 86 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRG+ T + + +++ G+ L + AF+++ +NIR Sbjct: 87 ATLLHDDV--VDESTLRRGRATANESFGNPASVLVGDFLYSRAFQMMLD-----ANNIRV 139 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 +L+ N+ +G + Q++++ D +DET + + KT L + A++A + Sbjct: 140 MEILAEATNVIAEGEVL-QLMNMHDASLDETAYLRVIRSKTAKLFEASTRLAAVLAGVTP 198 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 +E +G+ LG FQ+ DD+LD D Sbjct: 199 EVEEACATYGQALGTAFQVIDDVLDYAGD 227 >gi|309973622|gb|ADO96823.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2846] Length = 329 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGANSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL ++++ +++ N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILGIMADATNVLAEGEVQ-QLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220 Query: 229 D 229 D Sbjct: 221 D 221 >gi|325132994|gb|EGC55670.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M6190] gi|325136902|gb|EGC59499.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M0579] gi|325138982|gb|EGC61531.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ES14902] Length = 324 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ D++R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVD-----SDSMRVLEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS + L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|319404558|emb|CBI78164.1| octaprenyl-diphosphate synthase [Bartonella rochalimae ATCC BAA-1498] Length = 337 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A +F +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 56 GGKRIRPMITLATAHMFGYQGDKHIKLATAVEFMHTATLLHDDV--VDESALRRGKSTAR 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + +I+ G+ LL AF+++ ++ S LS+ N + G+++ + Sbjct: 114 IIWGNQASILVGDFLLGQAFKMMV--------DVGSLDALSVLSNAAAI-IAEGEVMQLS 164 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ET V I KT AL A E G I+A E+ L +G +LG+ FQL D Sbjct: 165 AAKNIETNVSDYLKIINAKTAALFSAAAEVGPIIAGYGPEERSALHQYGLSLGLAFQLID 224 Query: 226 DLLD 229 D+LD Sbjct: 225 DVLD 228 >gi|313819453|gb|EFS57167.1| polyprenyl synthetase [Propionibacterium acnes HL046PA2] Length = 324 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R LV C+ + VN +R +E H SL HDD+ MD RRG P+ Sbjct: 46 GGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++++ AI+ G+ Y F S +L D ++ Q + T + +QG + Sbjct: 104 NLRWGNSVAIMVGD----YLFSKASLAVAELGVDFVKLQ---ARTFSRLVQGQIAETRGP 156 Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q + D ++ + KTG+L+ + GA+++HAS L FGE++G +FQLAD Sbjct: 157 SQGQ--DPLAHYLKVVADKTGSLIAASAIFGAMVSHASAENVAALEQFGEDIGEVFQLAD 214 Query: 226 DLLD 229 DL+D Sbjct: 215 DLID 218 >gi|333023207|ref|ZP_08451271.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071] gi|332743059|gb|EGJ73500.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071] Length = 377 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + T + A+E +H +SL+HDDL MD RR + TV Sbjct: 81 GGKAVRPALALISAEVTGASAGTGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 138 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A EI+ +L + LT + ++ GQ DI Sbjct: 139 KVHGPAQAILVGDALFALANEIL----LELGTPEAGRATRRLTRAT--RALIDGQAQDIS 192 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + + L +G +LG+ FQ D Sbjct: 193 YEHRDRVTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVD 252 Query: 226 DLL 228 DLL Sbjct: 253 DLL 255 >gi|255326766|ref|ZP_05367842.1| bifunctional short chain isoprenyl diphosphate synthase [Rothia mucilaginosa ATCC 25296] gi|255295983|gb|EET75324.1| bifunctional short chain isoprenyl diphosphate synthase [Rothia mucilaginosa ATCC 25296] Length = 353 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 20/221 (9%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74 RI+ L + + QT H+ + LLSA GGK++R L CA++ + + Sbjct: 44 RIEERLAEAIAQT-DHLADVASRHLLSA------GGKRVRPLLALLCAAVDGEINDEVIE 96 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +E H +L HDD+ MD+ RRG + + + AI+ G+ + + A ++S Sbjct: 97 AAVVVELTHLATLYHDDV--MDDAPKRRGVDSAQMIWGNSVAILTGDLIFSRASLLVSEL 154 Query: 135 KTQLKDNIRSQLM--LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 T+ I+SQ L L G GQ D+ D +I + + KTG+L+ A Sbjct: 155 GTRPM-KIQSQTFERLVLGQLFETTGPREGQ--DLLDHYI------AVIEGKTGSLIAAA 205 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 E G++++ AS++ ++ +GE +G+ FQLADD++D D Sbjct: 206 GEYGSLLSGASEDIISMVKAYGELVGVAFQLADDVIDIVSD 246 >gi|121635537|ref|YP_975782.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18] gi|120867243|emb|CAM11012.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18] Length = 324 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ D++R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVD-----SDSMRVLEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS + L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|283788174|ref|YP_003368039.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168] gi|282951628|emb|CBG91328.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168] Length = 323 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A S +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCSDAQEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|187476774|ref|YP_784798.1| octaprenyl-diphosphate synthase [Bordetella avium 197N] gi|115421360|emb|CAJ47865.1| octaprenyl-diphosphate synthase [Bordetella avium 197N] Length = 321 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPAMVLMVARALGYEGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +++R +LS + +G + Q+L++ Sbjct: 101 AVFGNAASVLVGDYLYSRSFEMMVE-----ANSMRIMQILSEATTVIAEGEVL-QLLNVH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + + KT L A + GA++A A+ ++ +G ++G FQL DD+L Sbjct: 155 DPEVSQERYLQVVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHIGTAFQLIDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSGD 219 >gi|171059952|ref|YP_001792301.1| polyprenyl synthetase [Leptothrix cholodnii SP-6] gi|170777397|gb|ACB35536.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6] Length = 313 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 8/183 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV A + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 34 GGKRIRPLLVLLFARALDFDGPERFEMAATVEFIHTATLLHDDV--VDESDLRRGRKTAN 91 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ S + +R +L+ N+ +G + Q+L++ Sbjct: 92 AIFGNAASVLVGDFLYSRAFQMMVS-----VNRLRVLDVLADATNVIAEGEVL-QLLNMH 145 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I + + KT L + +GA++A S ++ +G LG FQL DDLL Sbjct: 146 DPDISIEAYLRVIRYKTAKLFEASARTGAVLAGVSAPLEDSCASYGRCLGTAFQLIDDLL 205 Query: 229 DCE 231 D E Sbjct: 206 DYE 208 >gi|254363100|ref|ZP_04979154.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213] gi|153094987|gb|EDN75550.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213] Length = 315 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + A IE +H +L+HDD+ +D +RRG+PT + Sbjct: 31 GGKRIRPLIAVLAARALGYRGKKHITAAAFIEFVHTATLLHDDV--VDESDMRRGRPTAN 88 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++R ++S N +G + Q++++ Sbjct: 89 AHFGNAASVLVGDFIYTRSFQMMTD-----LDSLRVLKVMSAATNALAEGEVQ-QLMNVN 142 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI A AS+ + L+ +G LG FQL DD+L Sbjct: 143 DPNTTEANYMRVIYNKTARLFEAATQCVAIAADASEEIETALKNYGCYLGTAFQLIDDIL 202 Query: 229 D 229 D Sbjct: 203 D 203 >gi|156742295|ref|YP_001432424.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] gi|156233623|gb|ABU58406.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] Length = 349 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 14/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R+ LV CA L + AL AIE +H SLIHDDL +D+ RRG TVH Sbjct: 71 GGKRLRAALVLLCARLGMYDPSRALHPAIAIELLHAASLIHDDL--VDHAGQRRGHVTVH 128 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---L 165 ++D A++ G+ Y F + ++ D + + Q M+ G++ Sbjct: 129 SRWDADVALLLGD----YFFALAANELAAEPDP-----RIIAFYTSAAQTMVEGELNPVT 179 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 I+ I Q + KT L AC++G +A + E L FG +LG+ FQ+ D Sbjct: 180 QIEPLAIAVEQYYRKIGCKTAVLFEAACKAGIAVAGGDDAQIETLGRFGYDLGLAFQIVD 239 Query: 226 DLLDCEED 233 D+LD D Sbjct: 240 DVLDYTGD 247 >gi|332678210|gb|AEE87339.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida Fx1] Length = 325 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N + L A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 44 GGKRLRPLLVMLFARALNYSGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ S DN++ Q++ T+ I +L Q+L+ Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ---NEKERLRCFGENLGIIFQLA 224 ++ + E + + KT L ACE +++ Q N ++ +R +G LG FQ+A Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIA 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDVLDYVSD 223 >gi|254374334|ref|ZP_04989816.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548] gi|151572054|gb|EDN37708.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548] Length = 325 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N + L A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 44 GGKRLRPLLVMLFARALNYSGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ S DN++ Q++ T+ I +L Q+L+ Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ---NEKERLRCFGENLGIIFQLA 224 ++ + E + + KT L ACE +++ Q N ++ +R +G LG FQ+A Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIA 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDVLDYVSD 223 >gi|119719519|ref|YP_920014.1| geranyltranstransferase [Thermofilum pendens Hrk 5] gi|119524639|gb|ABL78011.1| Geranyltranstransferase [Thermofilum pendens Hrk 5] Length = 337 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 36/248 (14%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M+ + +L E +D +++ LL+ AS + D +L +R +GGK++R L Sbjct: 1 MSARVLERLGEIGALVDPVMEKYLLRGAS---PEFQDAVLYQVR---MGGKRVRPALTIA 54 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 AL AA+E H YSLI DD+ +D+ +RRGKPTV +Y TAI+ Sbjct: 55 STLAVGGKEENALPAAAAVELAHNYSLILDDI--IDHSELRRGKPTVWKKYGISTAILIA 112 Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ 176 E ++ +P+ + I ++ + LT G+ LDI Q DE Sbjct: 113 VHYRESITEALNDTPEPPVFHAIMAETIKLLTD---------GERLDILFEQSGRSDEPY 163 Query: 177 VF--------------MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 V MI++ KT L+ +C GA+ A E LR +G NLG+ FQ Sbjct: 164 VVEQRYRAVRLDDYLRMIER-KTAKLIETSCVFGALSAGQRGEILEALREYGYNLGMAFQ 222 Query: 223 LADDLLDC 230 + DD++D Sbjct: 223 VGDDIIDI 230 >gi|261878883|ref|ZP_06005310.1| octaprenyl-diphosphate synthase [Prevotella bergensis DSM 17361] gi|270334523|gb|EFA45309.1| octaprenyl-diphosphate synthase [Prevotella bergensis DSM 17361] Length = 325 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 32/208 (15%) Query: 35 HNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 H D LLS + GK++R L+ A + T L +E +H SL+HDD+ Sbjct: 28 HTDGLLSQVLDHVRQRAGKRMRPILILLMAKNYGQITSTTLNAAVGLELLHTASLMHDDV 87 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D RRG+ +V+ +Y+ A++AG+ +L+ A L ++ TH Sbjct: 88 --VDESEERRGQASVNAEYNNKVAVLAGDYVLSTAL-----------------LHVNFTH 128 Query: 153 NIGL--------QGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 N + + + G++L IQ++ I ET + + KT AL E GA+ A Sbjct: 129 NEAIIETLAELGRTLSNGEILQLSAIQNQSISETTYYDVISQKTAALFEACAEVGALSAG 188 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229 A + R FG N+GIIFQ+ DD+ D Sbjct: 189 ADAAATTQARNFGRNIGIIFQIRDDIFD 216 >gi|197287216|ref|YP_002153088.1| octaprenyl diphosphate synthase [Proteus mirabilis HI4320] gi|227357090|ref|ZP_03841460.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906] gi|194684703|emb|CAR46670.1| octaprenyl-diphosphate synthase [Proteus mirabilis HI4320] gi|227162782|gb|EEI47745.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906] Length = 323 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLTGRALDYQGDKHISVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSSATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+ A+ +++ + +G LG FQL DDLL Sbjct: 155 DPDITEDDYMQVIYSKTARLFEAASHASAILCGATPEQEKAFQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|301166926|emb|CBW26505.1| putative octaprenyl-diphosphate synthase [Bacteriovorax marinus SJ] Length = 325 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 36/197 (18%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L+GGK++R L L+ V+ T +IE +H SL HDD+ +DN RRG + Sbjct: 42 LVGGKRLRPLLTYLVGHLYGVDFKTLDPYAKSIELVHAASLSHDDV--IDNATTRRGVAS 99 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++IQ A++AG+ LL S ++++LT N G ++G Sbjct: 100 INIQASNKKAVLAGDYLL-------------------SDVIVNLT-NAGNLELVGEMAKV 139 Query: 167 IQD----EFID----ETQVF---MIQKM---KTGALMCFACESGAIMAHASQNEKERLRC 212 IQD E+I ET+ + +I+++ KT ++M + C + AI+A S++ E+ + Sbjct: 140 IQDLAIGEWIQADAIETRDYTSELIEEIAIKKTASVMSWCCYAPAILAGLSRSTIEKSKQ 199 Query: 213 FGENLGIIFQLADDLLD 229 G +LGI FQL DD LD Sbjct: 200 MGIDLGIAFQLMDDTLD 216 >gi|125600856|gb|EAZ40432.1| hypothetical protein OsJ_24885 [Oryza sativa Japonica Group] Length = 333 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%) Query: 43 IRYALLG-GKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 +RYALL G ++ L + L AA E +H SL+HDD P MD+ Sbjct: 1 MRYALLAAGNRVGPALSLAAFPRCSGARRPWPLPAAAAFEMVHTLSLVHDDFPCMDDDDF 60 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLS---LTHN 153 RRGKPT H+ Y E A++ G+ LL+ +F + S P D ++++ + L Sbjct: 61 RRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARC 120 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEK 207 IG +G++ GQ++D+ E T+ ++++ KT AL+ + GAI+ S + Sbjct: 121 IGSEGLVAGQVVDL--EMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQI 178 Query: 208 ERLRCFGENLGIIFQLAD-DLLDCEEDLP 235 E LR + ++G++FQ+ D ++ E +P Sbjct: 179 ESLRMYARSIGLLFQVVDLEMTGSTETVP 207 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 8/74 (10%) Query: 163 QMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 Q++D+ E T+ ++++ KT AL+ + GAI+ S + E LR + + Sbjct: 193 QVVDL--EMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARS 250 Query: 217 LGIIFQLADDLLDC 230 +G++FQ+ DD+LD Sbjct: 251 IGLLFQVVDDILDV 264 >gi|148826474|ref|YP_001291227.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittEE] gi|148716634|gb|ABQ98844.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittEE] Length = 323 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRIRPLIAVLAARSLGFEGANSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL ++++ +++ N+ +G + Q++++ Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILGIMADATNVLAEGEVQ-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 155 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|298372664|ref|ZP_06982654.1| octylprenyl diphosphate synthase [Bacteroidetes oral taxon 274 str. F0058] gi|298275568|gb|EFI17119.1| octylprenyl diphosphate synthase [Bacteroidetes oral taxon 274 str. F0058] Length = 323 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 11/195 (5%) Query: 37 DRLL-SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 D LL +A++Y + GK+IR LV A L + AA E +H SLIHDD+ Sbjct: 30 DELLHNALQYLMPQKGKQIRPILVILGAKLCGEVTDDTYLIAAAYELLHSASLIHDDV-- 87 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +DN RR KP+++ +D T+++ G+ L+T +F I + + +L + + Sbjct: 88 IDNSLQRRNKPSLNKIFDNKTSVLVGDYLMTKSFNYIYHTYKMEQIGLLQKLSIDIIRGE 147 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 LQ + E + + + K KT AL ++GA+ A+ + + + + G Sbjct: 148 LLQQQYSHSI-------PKEKEYYSVIKNKTAALFATCLQAGALSANGTTQQLDDMYSIG 200 Query: 215 ENLGIIFQLADDLLD 229 ENLG+ FQ+ DD+ D Sbjct: 201 ENLGMCFQIKDDIFD 215 >gi|332967870|gb|EGK06966.1| octaprenyl-diphosphate synthase [Kingella kingae ATCC 23330] Length = 324 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPILTILSGKCLGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + ++ +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----LKILEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+A A+ +++ L+ FG ++G FQ+ DD+L Sbjct: 157 NVDITEAQYLQVIQYKTAKLFEAAAQVGAILAGATAEQEQALKDFGMHMGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|323701812|ref|ZP_08113482.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] gi|323533116|gb|EGB22985.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] Length = 320 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 17/221 (7%) Query: 19 ILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75 I +DL ++++ Q D LL+ LL GGK++R L++ + + + Sbjct: 8 IREDLGMVESEIRKVVQSRDSLLTKTSLQLLNAGGKRLRPAFALLAGRLYDADVEKLIPL 67 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E IH +L+HDD+ +D+ RRG PTV + ++ G+ L + +IS+ K Sbjct: 68 AVALELIHMATLVHDDV--VDDSMTRRGTPTVKANWGNKISMHTGDYLFAKSLVLISTYK 125 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFA 192 L + ++ + M G++ I + F + KT L+ + Sbjct: 126 EPLIAELLAKTSVK---------MCEGEIHQISTAYSANQSWRDYFYRIERKTALLIAAS 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 C+ GA+ A A + +RL FG LG+ FQ+ DD+LD D Sbjct: 177 CQLGAVAAGAPAKDHKRLGKFGHQLGMAFQITDDILDMVAD 217 >gi|319407551|emb|CBI81201.1| octaprenyl-diphosphate synthase [Bartonella sp. 1-1C] Length = 337 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A +F +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 56 GGKRIRPMITLATAHMFGYQGDKHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTAR 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + +I+ G+ LL AF+++ ++ S LS+ N + G+++ + Sbjct: 114 IIWGNQASILVGDFLLGQAFKMMV--------DVGSLDALSVLSNAAAI-IAEGEIMQLS 164 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ET V I KT AL A E G I+A E+ L +G +LG+ FQL D Sbjct: 165 AAKNIETNVSDYLKIINAKTAALFSAAAEVGPIIAGYGPEERSALHQYGLSLGLAFQLID 224 Query: 226 DLLD 229 D+LD Sbjct: 225 DVLD 228 >gi|119493298|ref|XP_001263839.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Neosartorya fischeri NRRL 181] gi|119411999|gb|EAW21942.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Neosartorya fischeri NRRL 181] Length = 451 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++Q+ A++AG+ LL A ++ Sbjct: 193 RLAEITELIHTASLLHDDV--IDNAVSRRSSNSANLQFGNKMAVLAGDFLLGRASVALA- 249 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187 +L+D ++L+ ++ N+ ++G + DE F DET + +QK +KT + Sbjct: 250 ---RLRDPEVTELLATVIANL-VEGEFMQLKNTVADEKNPVFTDETISYYLQKTYLKTAS 305 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + A++ ++ E +G NLG+ FQL DDLLD Sbjct: 306 LISKSCRAAALLGGSTPEVVEAAYSYGRNLGLAFQLVDDLLD 347 >gi|332526525|ref|ZP_08402637.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2] gi|332110793|gb|EGJ10970.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2] Length = 313 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 8/183 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 34 GGKRMRPRLLLLFSEALGFRGPERYELAAVVELIHTSTLLHDDV--VDESSLRRGRATAN 91 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L + +F+++ S K+ +R +L+ N+ +G + Q++++ Sbjct: 92 SMFGNAAAVLVGDFLYSRSFQMMVSVKS-----MRVLEVLAEATNVIAEGEVL-QLMNMH 145 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + KT L + GA++A AS +E +G +LG FQL DDLL Sbjct: 146 DADLAVDEYLRVIRFKTAKLFEASARLGAVLAGASAEVEEACADYGRSLGTAFQLVDDLL 205 Query: 229 DCE 231 D E Sbjct: 206 DYE 208 >gi|94986958|ref|YP_594891.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis PHE/MN1-00] gi|94731207|emb|CAJ54569.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis PHE/MN1-00] Length = 324 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 17/191 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R L + LF N + ++E +H +L+HDD+ +DN +RR T H Sbjct: 42 GKRLRPMLTILLSRLFGYNEDDIYPLAISVEFLHAATLLHDDV--LDNALLRRNTITAHN 99 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + V+ I+AG+ LL ++++ Q SQ + H G++L+I Sbjct: 100 LFGTVSTILAGDALLAKGNLLVATYGCQKCILTISQALYQTAH---------GEILEIYN 150 Query: 168 QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 Q E + +++ I KT ++ AC+ GA+ A A+ + + FG NLGI FQ+ DD Sbjct: 151 QGEIWENKNIYLEIITGKTAWVIQAACKVGALKAGATPQQVDVAALFGYNLGIAFQIIDD 210 Query: 227 LLDCEEDLPKK 237 LD LP K Sbjct: 211 ALDF---LPSK 218 >gi|71000625|ref|XP_754994.1| hexaprenyl pyrophosphate synthetase Coq1 [Aspergillus fumigatus Af293] gi|66852631|gb|EAL92956.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus fumigatus Af293] gi|159128008|gb|EDP53123.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus fumigatus A1163] Length = 450 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++Q+ A++AG+ LL A ++ Sbjct: 192 RLAEITELIHTASLLHDDV--IDNAVSRRSSNSANLQFGNKMAVLAGDFLLGRASVALA- 248 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187 +L+D ++L+ ++ N+ ++G + DE F DET + +QK +KT + Sbjct: 249 ---RLRDPEVTELLATVIANL-VEGEFMQLKNTVADEKNPVFTDETISYYLQKTYLKTAS 304 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + A++ ++ E +G NLG+ FQL DDLLD Sbjct: 305 LISKSCRAAALLGGSAPEVVEAAYSYGRNLGLAFQLVDDLLD 346 >gi|89256379|ref|YP_513741.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica LVS] gi|115314825|ref|YP_763548.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica OSU18] gi|254367716|ref|ZP_04983737.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica 257] gi|89144210|emb|CAJ79480.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica LVS] gi|115129724|gb|ABI82911.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica OSU18] gi|134253527|gb|EBA52621.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica 257] Length = 325 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N N L A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 44 GGKRLRPLLVILFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ S DN++ Q++ T+ I +L Q+L+ Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224 ++ + E + + KT L ACE +++ Q+ + R++ +G LG FQ+A Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGLISIDKQDYTKYQGRIKNYGVYLGNAFQIA 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDVLDYVSD 223 >gi|56477995|ref|YP_159584.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1] gi|56314038|emb|CAI08683.1| Polyprenyl synthetase (EC 2.5.1.-), gene: ISPB OR NE1915 [Aromatoleum aromaticum EbN1] Length = 322 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + ++ A +E IH +L+HDD+ +D +RRG T + Sbjct: 43 GGKRLRPALVLFSAGAMGYRGQSHHQLAAVVEFIHTATLLHDDV--VDESELRRGNKTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AF+++ ++R +L+ NI +G + Q+L+ Sbjct: 101 ALFGNAASVLVGDFLYTRAFQMMVGVG-----DMRVMQVLADATNIIAEGEVL-QLLNCH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + +D + + KT L A GAI+ A++ ++ ++ FG +LG FQ+ DD+L Sbjct: 155 NADVDIEDYLRVIRYKTAKLFEAATRLGAILGGANEEQERKVAAFGMHLGTAFQIIDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|302348132|ref|YP_003815770.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans 345-15] gi|302328544|gb|ADL18739.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans 345-15] Length = 338 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 10/194 (5%) Query: 49 GGKKIRSFLVTECA-SLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R +V A +L V+ A+ + +A+E H ++L+HDD+ MDN RRG PT Sbjct: 43 GGKRLRPLVVLATARALGGVDAEARAIPLASAVEIFHNFTLVHDDI--MDNDDFRRGVPT 100 Query: 107 VHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 VH Y AI AG+ + + +F I+ S + L + + + +LT + + GQ Sbjct: 101 VHKVYGVPLAITAGDLMFSLSFASILRSLEKGLDEEYVIKAVQALTE--ASRKVAEGQGY 158 Query: 166 DI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D+ + +D + +KTGAL+ + + GAI A A E + +G +G+ FQ Sbjct: 159 DMLFERSWNVDAEDYLRMIYLKTGALVEASAKLGAIAAKAKDEVIETMGEYGRLVGLAFQ 218 Query: 223 LADDLLDCEEDLPK 236 + DD+L D K Sbjct: 219 IRDDILGVFGDPSK 232 >gi|152972111|ref|YP_001337257.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896694|ref|YP_002921439.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae NTUH-K2044] gi|262042746|ref|ZP_06015900.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150956960|gb|ABR78990.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549021|dbj|BAH65372.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039971|gb|EEW41088.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 323 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF+++ TQL +++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMM----TQLG-SLKILEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + ++A + E+ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAASQCAGLLADCTAEEERALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|11499867|ref|NP_071111.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Archaeoglobus fulgidus DSM 4304] gi|2648237|gb|AAB88971.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) {Methanobacterium thermoautotrophicum [Archaeoglobus fulgidus DSM 4304] Length = 326 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 9/191 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + ++ + +IE IH ++L+HDD+ MD +RRG PTVH Sbjct: 49 GGKRLRPVISLLAVEALGKDYRKIIPAAVSIETIHNFTLVHDDI--MDRDEMRRGVPTVH 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y E TAI+AG+ L AF++++ + + ++ MLS ++ ++ + GQ D+ Sbjct: 107 RVYGEATAILAGDTLFAEAFKLLTKCDVESEGIRKATEMLS---DVCIK-ICEGQYYDMS 162 Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + E + + ++KTG L+ + A++ S+ + L +G GI FQ+ D Sbjct: 163 FEKKESVSEEEYLRMVELKTGVLIAASAALPAVLFGESEEIVKALWDYGVLSGIGFQIQD 222 Query: 226 DLLDCEEDLPK 236 DLLD E+ K Sbjct: 223 DLLDLTEETGK 233 >gi|281422323|ref|ZP_06253322.1| octaprenyl-diphosphate synthase [Prevotella copri DSM 18205] gi|281403644|gb|EFB34324.1| octaprenyl-diphosphate synthase [Prevotella copri DSM 18205] Length = 325 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 10/197 (5%) Query: 35 HNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 H+D LLS + GK++R L+ A F +E +H SL+HDD+ Sbjct: 28 HSDGLLSQVLDHIRQRAGKRMRPILILLMARNFGKVSNVTQHSAVGLELLHTASLVHDDV 87 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D RRG+ +V+ Y+ A++ G+ +L+ A +S ++ ++L L++ Sbjct: 88 --VDESVERRGQASVNATYNNKVAVLVGDFILSTALLHVSYSHSEEIVRYLAELGRILSN 145 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 LQ + I +E I E + + K KT AL GA+ A+AS+ + E + Sbjct: 146 GEILQ------LNSISNEEISEDIYYQVIKQKTAALFEACAGIGAMSANASELQIEEAKR 199 Query: 213 FGENLGIIFQLADDLLD 229 FG+NLGIIFQ+ DD+ D Sbjct: 200 FGQNLGIIFQIRDDIFD 216 >gi|329997657|ref|ZP_08302894.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3] gi|328538933|gb|EGF64988.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3] Length = 323 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF+++ TQL +++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMM----TQLG-SLKILEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + ++A + E+ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAASQCAGLLADCTAEEERALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|239982232|ref|ZP_04704756.1| putative polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 347 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 13/185 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R LV ALR AA+E H ++L+HDD+ +D RR +PT Sbjct: 62 GGKAVRPALVLAAVHALGGRPERALRSAAAVELTHNFTLLHDDV--IDRDRTRRHRPTAW 119 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + AI+AG+ L + A + ++ ++L + + GQ D Sbjct: 120 TVFGDADAILAGDALQSLAQQWLAEDPHPRAGAAVARLARCVIE------LCAGQHTDCA 173 Query: 169 DEFIDETQV-----FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 E T+V + + KTGAL+ AC GA+ A A ++ L FG G+ FQL Sbjct: 174 LEDRAPTEVSLDECLTMAESKTGALLGCACALGALHADAEPDQVNALDAFGREAGLAFQL 233 Query: 224 ADDLL 228 DD++ Sbjct: 234 IDDII 238 >gi|18312349|ref|NP_559016.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2] gi|18159799|gb|AAL63198.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2] Length = 334 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 28/205 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + AL A +E IH YSLI+DD+ +D G +RRG PTV Sbjct: 42 GGKRLRPLLTLATAEAISGQWKPALPAAAIVELIHNYSLIYDDI--IDRGDLRRGMPTVR 99 Query: 109 IQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 Y + AI+ G E ++ +PK L ++++ ++ G+ LDI Sbjct: 100 KAYGDNAAILIGIWYREAIEEAVLDTPKPTLFAREVAKVIKAIDE---------GERLDI 150 Query: 168 QDEFIDETQVFMIQ---------------KMKTGALMCFACESGAIMAHASQNEKERLRC 212 E+ + ++ +KTG L+ A + GA+ + Sbjct: 151 LFEYAGREDPYFVKARWREVTLDDYIKMVSLKTGVLIGAAAKWGALSVSDDAEIADAAWN 210 Query: 213 FGENLGIIFQLADDLLDCEEDLPKK 237 FG N G+ FQ+ DD+LD D PKK Sbjct: 211 FGLNAGVAFQVIDDVLDIYGD-PKK 234 >gi|260581709|ref|ZP_05849506.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae NT127] gi|260095302|gb|EEW79193.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae NT127] Length = 329 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL ++++ +++ N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEVQEKALQDYGRYLGTAFQLVDDVL 220 Query: 229 D 229 D Sbjct: 221 D 221 >gi|254372879|ref|ZP_04988368.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. novicida GA99-3549] gi|151570606|gb|EDN36260.1| octaprenyl-diphosphate synthase [Francisella novicida GA99-3549] Length = 325 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N N L A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 44 GGKRLRPLLVMLFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ S DN++ Q++ T+ I +L Q+L+ Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224 ++ + E + + KT L ACE +++ Q + R++ +G LG FQ+A Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQGYTKYQGRIKNYGVYLGNAFQIA 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDVLDYVSD 223 >gi|323358802|ref|YP_004225198.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum StLB037] gi|323275173|dbj|BAJ75318.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum StLB037] Length = 353 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + V A+E H SL HDD+ MD RRG P+ Sbjct: 68 GGKRVRPMLAILTAQLGRGTTPEVIEVATALELTHLGSLYHDDV--MDGADKRRGVPSAQ 125 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + AI+ G+ L + A ++++ QL+ + +L+L H +G Q Sbjct: 126 TVWGNNIAILTGDLLFSRASQLMARRGERAIQLQADTFERLVLGQMHET-----VGPQEG 180 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D EF + KTG+L+ A + G I + A + ++ + FGE G+ FQL D Sbjct: 181 DEPVEFY-----LRVLADKTGSLIAAAAQCGVIYSGAPEEFEQPMVVFGEKAGVAFQLLD 235 Query: 226 DLLDCEED 233 D++D D Sbjct: 236 DVIDLSPD 243 >gi|325299489|ref|YP_004259406.1| Trans-hexaprenyltranstransferase [Bacteroides salanitronis DSM 18170] gi|324319042|gb|ADY36933.1| Trans-hexaprenyltranstransferase [Bacteroides salanitronis DSM 18170] Length = 324 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 10/185 (5%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A L+ V + L ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPMLVMLMAKLYGVVNPATLHSALSLELLHTASLVHDDV--VDKSDKRRGQASVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 YD +++ G+ +L + + K +L D L+ L N+ ++ Q+ + Sbjct: 103 LYDNRVSVLVGDYMLATSLRHAAYTKEIELVD-----LVARLGQNLSEGEIV--QLANTN 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E F + + KT AL + ESGA+ AS + + FGE +GI FQ+ DD+ Sbjct: 156 NTDFSEEIYFDVIRKKTAALFTASAESGALSVKASAEDVDNAALFGEMIGIAFQIKDDIF 215 Query: 229 DCEED 233 D E+ Sbjct: 216 DYFEN 220 >gi|4633648|gb|AAD26851.1| geranylgeranyl diphosphate synthase [Archaeoglobus fulgidus] Length = 317 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 9/191 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + ++ + +IE IH ++L+HDD+ MD +RRG PTVH Sbjct: 40 GGKRLRPVISLLAVEALGKDYRKIIPAAVSIETIHNFTLVHDDI--MDRDEMRRGVPTVH 97 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y E TAI+AG+ L AF++++ + + ++ MLS ++ ++ + GQ D+ Sbjct: 98 RVYGEATAILAGDTLFAEAFKLLTKCDVESEGIRKATEMLS---DVCIK-ICEGQYYDMS 153 Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + E + + ++KTG L+ + A++ S+ + L +G GI FQ+ D Sbjct: 154 FEKKESVSEEEYLRMVELKTGVLIAASAALPAVLFGESEEIVKALWDYGVLSGIGFQIQD 213 Query: 226 DLLDCEEDLPK 236 DLLD E+ K Sbjct: 214 DLLDLTEETGK 224 >gi|205373837|ref|ZP_03226639.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus coahuilensis m4-4] Length = 320 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V N V ++E IH SL+ DD+ +D+ IRRG PTV Sbjct: 43 GGKRIRPVFVLLGGKFGEYNIDVVKNVAVSLELIHMASLVLDDV--IDDAEIRRGIPTVK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Q+D A+ G+ + + + + + I S ++ + G++ I+ Sbjct: 101 SQWDNKVAMYTGDYIFARSLDYMLNIPNPEAHKILSDAIVEVCK---------GEIAQIK 151 Query: 169 DEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D+++ E + ++ + K KT L+ +C+ GAI++ A + ERL FG +G+ FQ+ D Sbjct: 152 DKYLFEQSLRDYLRRIKRKTALLIAVSCQLGAIVSGAPREVHERLYRFGYYVGMSFQIID 211 Query: 226 DLLD 229 D+LD Sbjct: 212 DILD 215 >gi|27262424|gb|AAN87493.1| Farnesyl pyrophosphate synthetase [Heliobacillus mobilis] gi|111075007|gb|ABH04860.1| polyprenyl diphosphate synthase [Heliobacillus mobilis] gi|155241755|gb|ABT18037.1| heptaprenyl diphosphate synthase [Heliobacillus mobilis] Length = 320 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 14/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R V N + L + A+E IH SL+HDD+ +D RRG PTV Sbjct: 42 GGKRLRPAFVLLAGRFHNYSLERLLPLAVAMEMIHMASLVHDDV--VDESKTRRGIPTVK 99 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI---GLQGMLGGQML 165 ++ +I G+ L + +I+ +L D+ S+++ ++ + +Q M G Sbjct: 100 ARWGNRISIHTGDHLFARSLLLIA----ELNDDKISEVLAKVSVEMCKGEIQQMSG--TF 153 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D+ F D +F I++ KT L+ +C+ GA+ A + L+ +G +LG+ FQ+ D Sbjct: 154 DVNQTFRD--YLFHIKR-KTALLISASCQLGAMAVKADPSIVRALKMYGHHLGMAFQVTD 210 Query: 226 DLLDCEED 233 D+LD D Sbjct: 211 DILDLTAD 218 >gi|329938270|ref|ZP_08287721.1| putative polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus M045] gi|329302759|gb|EGG46649.1| putative polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus M045] Length = 347 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + +A+ A+E +H ++L+HDD+ +D +RR +P Sbjct: 62 GGKSVRPALTLLSAMAVGGSAESAVPGAVAVELVHDFTLLHDDV--IDGDDLRRHRPAAW 119 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ LL A +++ + Q +L+ +L ++ GQ D+ Sbjct: 120 SVFGTPAAVLTGDALLVAAMRVLTDTQQQRMAVAVKELVDALLE------LVEGQSRDVA 173 Query: 169 DEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E E Q + + KTG+LM A G ++A A + LR FG LG+ FQ AD Sbjct: 174 YEKAPEVSVAQYLAMAEGKTGSLMGCAAALGGVLAGADEVRVRGLREFGRRLGVAFQCAD 233 Query: 226 DLL 228 D+L Sbjct: 234 DVL 236 >gi|94270612|ref|ZP_01291782.1| Geranyltranstransferase [delta proteobacterium MLMS-1] gi|93450734|gb|EAT01802.1| Geranyltranstransferase [delta proteobacterium MLMS-1] Length = 340 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 38/244 (15%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L +LQ + +I+T++ A+ ++ + RL + +AL GGK+IR L A Sbjct: 6 LKKQLQAAAGQIETVM-------AADLEGVTSPRLREVLEHALFAGGKRIRPLLTLLAAR 58 Query: 64 LFNV-NH-------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 L NH R+ A E +H SL+HDD+ +D+ RRG+ TV+ Sbjct: 59 LTTAANHGGVPTEPPAADQATDQQRLAIAFEYLHTASLLHDDV--IDHAAQRRGRETVNS 116 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 ++D+ AI+AG+ L A L N Q L L + + M+ + L + Sbjct: 117 RWDQGHAILAGDFLHARAM--------WLAGNYGGQPCLELIAS-ATEAMVAAEFLQAEA 167 Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ ET F + + KT AL+ AC+ G + + + LR +G NLG+ FQ+ D Sbjct: 168 AAARDWRRET-YFAVLEGKTAALIAAACQCGVVAGGGDYRQGQALRVYGANLGLAFQIID 226 Query: 226 DLLD 229 DLLD Sbjct: 227 DLLD 230 >gi|118399458|ref|XP_001032054.1| Polyprenyl synthetase family protein [Tetrahymena thermophila] gi|89286391|gb|EAR84391.1| Polyprenyl synthetase family protein [Tetrahymena thermophila SB210] Length = 438 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 6/159 (3%) Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A IE IH SL+HDD+ +DN + RRG T H+++ A+ +G+ ++ + + IS Sbjct: 175 AAVIENIHVSSLVHDDI--IDNAFTRRGLETAHVKFGHREAVFSGDYIIGRSGQQISRFN 232 Query: 136 TQLKDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 I S +M +LTH I D+ DE I+ Q + KT +LM F+ + Sbjct: 233 DIRMYQIYSHIMENLTHGEINQANSKRTYKYDL-DEIIN--QYILKTYYKTASLMAFSAQ 289 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+ + + +E L F ++LGI FQLADD+LD D Sbjct: 290 GVGIILNQDFHNQECLFKFAQHLGISFQLADDMLDYTSD 328 >gi|76802484|ref|YP_327492.1| trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase ) [Natronomonas pharaonis DSM 2160] gi|76558349|emb|CAI49939.1| probable trifunctional short-chain (E)-prenyl diphosphate synthase (probable dimethylallyltransferase / probable geranyltranstransferase / probable farnesytranstransferase) [Natronomonas pharaonis DSM 2160] Length = 341 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 28/223 (12%) Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIR-SFLVTECASLFNVNHLTA------------- 72 + + Q +RL SA RY L GGK++R + L+ SL +V L+A Sbjct: 23 SEQLPVQKPERLYSASRYLLDAGGKRLRPTILLLAAESLADVEPLSADYRQFPSLPGDEV 82 Query: 73 --LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 L +IE I ++LIH MD+ +RRG P VH +YD TAI+AG+ L + AFE Sbjct: 83 DVLSAAVSIEVIQSFTLIH--DDIMDDDDLRRGVPAVHREYDLETAILAGDTLYSKAFEY 140 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTG 186 + + ++ + L+ T + GQ LD+ + + E + M++ KT Sbjct: 141 MLDTGAPAERSVEALDELATT----CTEICEGQALDVDFENRSDVTTEEYLEMVE-FKTA 195 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L A AI+ + E L +G ++G FQ+ DDLLD Sbjct: 196 VLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLD 238 >gi|312880186|ref|ZP_07739986.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260] gi|310783477|gb|EFQ23875.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260] Length = 303 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 12/231 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHN-------DRLLSAIRYAL-LGGKKIRSFLVTECA 62 E +R+ L++ L + +Q RL A+ Y+L GGK+IR L A Sbjct: 4 ERQQRLKNFLEERRLWIEDALSSQCEVPWEEVPPRLQEAMVYSLQAGGKRIRPVLCLAAA 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + A+ + A E IH SLIHDDLP MD+ +RRGKPT H + E A++AG+ Sbjct: 64 EQCGLAPRRAMPLALAHEWIHTASLIHDDLPCMDDDDLRRGKPTNHRVFGEALALLAGDA 123 Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVF 178 LL +AFE + +L + + + +G +G+ GGQ+ D Q + D V+ Sbjct: 124 LLAWAFEFALEGLCREELPAPQILKALQTFARAVGPRGICGGQVRDTDPQSQSEDPEDVW 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +I + KT L+ A GA++A A + +G +LG FQ+ DD+LD Sbjct: 184 LIARTKTSVLLESALVGGALLAGAEPSVVSAYGHYGTHLGTAFQIVDDVLD 234 >gi|319899203|ref|YP_004159296.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73] gi|319403167|emb|CBI76726.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73] Length = 338 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A +F +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRIRPMITLAAAHMFGYQGDKHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+++ ++ S LS+ N + G+++ + Sbjct: 115 MIWGNQASVLVGDFLLGQAFKMMV--------DVGSLEALSVLANAAAI-IAEGEVMQLS 165 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ET V I KT AL A E G I+A E+ L +G +LG+ FQL D Sbjct: 166 AAKNIETNVSNYLKIINAKTAALFSAAAEVGPIIAGYGHEERSALHQYGLSLGVAFQLID 225 Query: 226 DLLD 229 D+LD Sbjct: 226 DVLD 229 >gi|229592556|ref|YP_002874675.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25] gi|229364422|emb|CAY52224.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25] Length = 322 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ + I SQ + LQ + ++ Sbjct: 101 AMWGNAPSVLVGDFLYSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQ------LSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + A+ + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCGATVEQAEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|88811177|ref|ZP_01126433.1| Polyprenyl synthetase [Nitrococcus mobilis Nb-231] gi|88791716|gb|EAR22827.1| Polyprenyl synthetase [Nitrococcus mobilis Nb-231] Length = 328 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 14/216 (6%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 LD L + + + + + ++Y + GK+IR LV AL AI Sbjct: 14 LDKELTRQIPKLFSAFGPQQIKTVQYIINNGKRIRGCLVCLVNHALGGQIADALPRAVAI 73 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 ECI SLIHDD +DN IRR +P A++ G+ + +A I S + Sbjct: 74 ECIQAASLIHDDY--VDNDTIRRKRPATWTVEGPRRAVLLGD--MMFATAIQSMVELSNA 129 Query: 140 DNIRSQLMLSLTHNIGLQGML------GGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 D I ++ N Q L G+ LD+ ++ I E +++ KTGAL AC Sbjct: 130 DGIAVTRAIATVANGAYQEPLLLAKPAAGRALDLNEQTIYERIIYL----KTGALFGAAC 185 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + GAI A A + FG G +Q+ADDL++ Sbjct: 186 QLGAIAAGAPEERCAHAYAFGARTGEAYQIADDLVE 221 >gi|94264378|ref|ZP_01288169.1| Geranyltranstransferase [delta proteobacterium MLMS-1] gi|93455207|gb|EAT05423.1| Geranyltranstransferase [delta proteobacterium MLMS-1] Length = 340 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 38/244 (15%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L +LQ + +I+T++ A+ ++ + RL + +AL GGK+IR L A Sbjct: 6 LKKQLQAAAGQIETVM-------AADLEGVTSPRLREVLEHALFAGGKRIRPLLTLLAAR 58 Query: 64 LFNV-NH-------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 L NH R+ A E +H SL+HDD+ +D+ RRG+ TV+ Sbjct: 59 LTTAANHGGVPTEPPAADQATDRQRLAIAFEYLHTASLLHDDV--IDHAAQRRGRETVNS 116 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 ++D+ AI+AG+ L A L N Q L L + + M+ + L + Sbjct: 117 RWDQGHAILAGDFLHARAM--------WLAGNYGGQPCLELIAS-ATEAMVAAEFLQAEA 167 Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ ET F + + KT AL+ AC+ G + + + LR +G NLG+ FQ+ D Sbjct: 168 AAARDWRRET-YFAVLEGKTAALIAAACQCGVVAGGGDYRQGQALRVYGANLGLAFQIID 226 Query: 226 DLLD 229 DLLD Sbjct: 227 DLLD 230 >gi|157803653|ref|YP_001492202.1| octaprenyl-diphosphate synthase [Rickettsia canadensis str. McKiel] gi|157784916|gb|ABV73417.1| Octaprenyl-diphosphate synthase [Rickettsia canadensis str. McKiel] Length = 327 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 99/178 (55%), Gaps = 13/178 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L A +F+ +++ +A+E IH +L+HDD+ +D+ +RR KPT + Sbjct: 44 GGKRIRPLLTIITAKMFDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + T+I+ G+ L + +F+++ + + I++ +L+ I +G + Q++ + Sbjct: 102 VIWGSKTSILVGDFLFSQSFKLMVAAGS-----IKAMNILAKASAIISEGEVV-QLVKLN 155 Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + IDE Q I K KT L +C+ GAI+A + + ++ FG+ LG IFQ+ Sbjct: 156 ERRIITIDEYQ--QIVKSKTAELFGASCKVGAIIAEQVDHVSKDMQDFGKLLGTIFQV 211 >gi|119872709|ref|YP_930716.1| polyprenyl synthetase [Pyrobaculum islandicum DSM 4184] gi|119674117|gb|ABL88373.1| Polyprenyl synthetase [Pyrobaculum islandicum DSM 4184] Length = 334 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 28/205 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + AL +E IH YSLI+DD+ +D G +RRG PTV Sbjct: 42 GGKRLRPLLTLAIAEAVSGQWEPALPAATIVELIHNYSLIYDDI--IDRGDVRRGMPTVR 99 Query: 109 IQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + AI+ G E ++ +PK L+ + ++ + G+ LDI Sbjct: 100 KAFGDNAAILIGIWYREAIEEAVLDTPKP---------LVFAKEVAKVIKAIDEGERLDI 150 Query: 168 QDEFIDETQVFMIQ---------------KMKTGALMCFACESGAIMAHASQNEKERLRC 212 E+ + I+ +KTG L+ A + G + S+ E Sbjct: 151 LFEYAGRDDPYFIKARKRDVTVEDYIHMVSLKTGVLIAAAAKWGVLSVSDSKELAETAWN 210 Query: 213 FGENLGIIFQLADDLLDCEEDLPKK 237 FG N GI FQ+ DD+LD D PKK Sbjct: 211 FGLNAGIAFQIIDDVLDIYGD-PKK 234 >gi|331008742|gb|EGH88798.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 322 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++ G+ L + +FE++ +L +++ T I +L Q+ I+ Sbjct: 101 ALWGNAPRVLVGDFLYSRSFEMM----VELGSMEVMRILSKATRIIAEGEVL--QLSKIR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + +A + + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|295835546|ref|ZP_06822479.1| polyprenyl synthetase [Streptomyces sp. SPB74] gi|197699439|gb|EDY46372.1| polyprenyl synthetase [Streptomyces sp. SPB74] Length = 385 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + T + A+E +H +SL+HDDL MD RR + TV Sbjct: 90 GGKAVRPALALISAEVTGAGAETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 147 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ +L + LT + ++ GQ DI Sbjct: 148 KVHGPAQAILVGDALFALANEVL----LELGTAEAGRATRRLTR--ATRALIDGQAQDIS 201 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + + L +G +LG+ FQ D Sbjct: 202 YEHRDRVTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVD 261 Query: 226 DLL 228 DLL Sbjct: 262 DLL 264 >gi|260548979|ref|ZP_05823201.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624] gi|260408147|gb|EEX01618.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624] Length = 325 Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 26/194 (13%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L L N+ H A R+ A IE +H +L+HDD+ +D +RRG+P Sbjct: 46 GGKRMRPIMCLLAARACGLDNMQH--AQRLAAIIEMLHTATLVHDDV--VDESGLRRGRP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 T + ++ TA++ G+ L+ AF+++ + T LKD + G + G+ Sbjct: 102 TANATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGE 150 Query: 164 MLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 +L +Q + +ET + +I KT L A E AI+A + +E LR F + G Sbjct: 151 VLQLQSQHQPDTTEETYLKIIHG-KTSRLFELATEGAAILA-GQEAYREPLRLFAGHFGN 208 Query: 220 IFQLADDLLDCEED 233 FQ+ DD+LD D Sbjct: 209 AFQIIDDILDYTSD 222 >gi|294630816|ref|ZP_06709376.1| trans-hexaprenyltranstransferase [Streptomyces sp. e14] gi|292834149|gb|EFF92498.1| trans-hexaprenyltranstransferase [Streptomyces sp. e14] Length = 336 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVMLAAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVASAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++ A++ G+ L A +I++ + +R Q + + ++ GQ+L Sbjct: 111 TRWGNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ +C GA+M+ A + + L +GE LG+ Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGV 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDIASD 228 >gi|213859721|ref|ZP_03385425.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 318 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 10/204 (4%) Query: 32 QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 Q + +L++ + Y ++ GGK+IR + A + + A IE IH +L+H Sbjct: 24 QLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLH 83 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 84 DDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMS 136 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 N+ +G + Q++++ D I E + KT L A + I+A + +++ Sbjct: 137 EAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKG 195 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L+ +G LG FQL DDLLD D Sbjct: 196 LQDYGRYLGTAFQLIDDLLDYSAD 219 >gi|213582666|ref|ZP_03364492.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 319 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 10/204 (4%) Query: 32 QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 Q + +L++ + Y ++ GGK+IR + A + + A IE IH +L+H Sbjct: 24 QLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLH 83 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 84 DDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMS 136 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 N+ +G + Q++++ D I E + KT L A + I+A + +++ Sbjct: 137 EAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKG 195 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L+ +G LG FQL DDLLD D Sbjct: 196 LQDYGRYLGTAFQLIDDLLDYSAD 219 >gi|332664666|ref|YP_004447454.1| trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM 1100] gi|332333480|gb|AEE50581.1| Trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM 1100] Length = 322 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 115/232 (49%), Gaps = 29/232 (12%) Query: 16 IDTI---LDDLLLQTASHMQTQHNDR--LLSAIRYALL--GGKKIRS---FLVTE-CASL 64 +DTI +D L++ H + LL I Y ++ GK++R FL + C + Sbjct: 3 LDTIKKPIDQELIKFEQHFKQSMRSSVPLLDKITYYIVRRKGKQVRPMFVFLAAQVCGGV 62 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 ++ A + IE +H +L+HDD+ +D+ RRG +V+ + A++ G+ LL Sbjct: 63 VEATYVAA----SLIELLHTATLVHDDV--VDDSMERRGFFSVNALWKNKIAVLVGDFLL 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQ 181 + +++ Q + +L + + ++ M G++L I+ I E + I Sbjct: 117 SQGL-LLAVRNKQFR-------ILEIVSD-AVKAMSEGELLQIEKARRLDIKEEVYYEII 167 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT +L+ AC++GA A ++ ER+R FGE +G+ FQ+ DDL D D Sbjct: 168 RQKTASLISSACQAGAASATTDEDAIERMRLFGEKIGLAFQIKDDLFDFGTD 219 >gi|94501366|ref|ZP_01307886.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65] gi|94426479|gb|EAT11467.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65] Length = 322 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N + + IE +H +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRMRPLLVLLAAKALESNEQNHPLLASIIEFLHTATLLHDDV--VDTSDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AFE++ QL ++ +LS + +G + Q+++++ Sbjct: 101 AAFGNAPSVLVGDFLYSRAFEMM----VQLG-SMEVMAILSNATCVIAEGEVM-QLMNVK 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + E + + + KT L + SGA +A+AS + E LR FG +LG+ FQL DD+L Sbjct: 155 NPNVGEDKYMDVIQGKTAMLFEASSHSGAKLANASPEQAEALRLFGHHLGMAFQLVDDVL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|146313257|ref|YP_001178331.1| octaprenyl diphosphate synthase [Enterobacter sp. 638] gi|145320133|gb|ABP62280.1| Trans-hexaprenyltranstransferase [Enterobacter sp. 638] Length = 323 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAILAARAVGYQGDAHVNIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A ++ ++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTEAQERGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|312199711|ref|YP_004019772.1| polyprenyl synthetase [Frankia sp. EuI1c] gi|311231047|gb|ADP83902.1| Polyprenyl synthetase [Frankia sp. EuI1c] Length = 338 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 15/190 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A L A+E +H +SL+HDDL MD RR +PT Sbjct: 53 GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 + AI+AG+ LL A +++ + + + ++ ++L G+Q ++ GQ D+ Sbjct: 111 TVFGADGAILAGDALLGLATQVLL--EVEGEPGRKAAVIL----GAGVQDLVRGQAEDLL 164 Query: 168 ----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D + ET ++ KTGAL+ A GA++A A + + L FG LG FQL Sbjct: 165 FESRSDVTVAET--LHMEDGKTGALLACAASLGAVLAGAPKEVVDGLAEFGSRLGTAFQL 222 Query: 224 ADDLLDCEED 233 DDLL D Sbjct: 223 IDDLLGIWGD 232 >gi|329118546|ref|ZP_08247250.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC BAA-1200] gi|327465281|gb|EGF11562.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC BAA-1200] Length = 324 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIITILAGKSLGYDGDPLYSLAAMVEFIHTSTLLHDDV--VDESDMRRGRETAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + ++ +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MKILEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I ET+ + + KT L A + GAI+A AS ++ LR +G +G FQ+ DD+L Sbjct: 157 NTDISETEYLRVIQYKTAKLFEAAAQVGAILAGASAEQEAALRDYGMYVGTAFQIVDDIL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|291454079|ref|ZP_06593469.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291357028|gb|EFE83930.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 383 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 13/185 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R LV ALR AA+E H ++L+HDD+ +D RR +PT Sbjct: 98 GGKAVRPALVLAAVHALGGRPERALRSAAAVELTHNFTLLHDDV--IDRDRTRRHRPTAW 155 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + AI+AG+ L + A + ++ ++L + + GQ D Sbjct: 156 TVFGDADAILAGDALQSLAQQWLAEDPHPRAGAAVARLARCVIE------LCAGQHTDCA 209 Query: 169 DEFIDETQV-----FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 E T+V + + KTGAL+ AC GA+ A A ++ L FG G+ FQL Sbjct: 210 LEDRAPTEVSLDECLTMAESKTGALLGCACALGALHADAEPDQVNALDAFGREAGLAFQL 269 Query: 224 ADDLL 228 DD++ Sbjct: 270 IDDII 274 >gi|16762067|ref|NP_457684.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766600|ref|NP_462215.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143556|ref|NP_806898.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415234|ref|YP_152309.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364164|ref|YP_002143801.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205354206|ref|YP_002228007.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858553|ref|YP_002245204.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213053033|ref|ZP_03345911.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426652|ref|ZP_03359402.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213646987|ref|ZP_03377040.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238910099|ref|ZP_04653936.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825815|ref|ZP_06544983.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25314317|pir||AH0903 octaprenyl-diphosphate synthase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421862|gb|AAL22174.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504370|emb|CAD07822.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139191|gb|AAO70758.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129491|gb|AAV78997.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095641|emb|CAR61209.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205273987|emb|CAR38993.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710356|emb|CAR34714.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261248470|emb|CBG26307.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301159854|emb|CBW19373.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|322684901|gb|EFY80899.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323211311|gb|EFZ96155.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323224032|gb|EGA08325.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230319|gb|EGA14438.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323246927|gb|EGA30893.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254140|gb|EGA37960.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|332990163|gb|AEF09146.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 323 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 10/204 (4%) Query: 32 QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 Q + +L++ + Y ++ GGK+IR + A + + A IE IH +L+H Sbjct: 24 QLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLH 83 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 84 DDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMS 136 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 N+ +G + Q++++ D I E + KT L A + I+A + +++ Sbjct: 137 EAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKG 195 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L+ +G LG FQL DDLLD D Sbjct: 196 LQDYGRYLGTAFQLIDDLLDYSAD 219 >gi|261884768|ref|ZP_06008807.1| geranyltranstransferase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 124 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 4/107 (3%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIE 80 +L L ND L ++ GGK R+ L+ + +A V AA+E Sbjct: 8 ELNLPKVDSFHPHFNDSLSWVLK---AGGKHFRAKLLLGVVDALKPDLKSASYPVAAAVE 64 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +H YSLIHDDLP MDN +RRG T+H++YDEV+A++AG+ L T+A Sbjct: 65 MLHTYSLIHDDLPCMDNADLRRGVATLHVKYDEVSAVLAGDALNTHA 111 >gi|269798314|ref|YP_003312214.1| polyprenyl synthetase [Veillonella parvula DSM 2008] gi|269094943|gb|ACZ24934.1| Polyprenyl synthetase [Veillonella parvula DSM 2008] Length = 323 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 14/187 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R+ L A+ +++ A+E +H +LIHDD+ +D IRRG+ T+H Sbjct: 46 GGKRLRAQLCLLIANAGTSIERQRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI++G+ L AF+I+S + S ++ L G+ + ++ Sbjct: 104 MHKGNKVAILSGDYLFAKAFKIVSEMTNMKYLQVFSHIITCLVE---------GEFMQME 154 Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + ID+ + +MI+ K A C E G ++ ++E L+ +G LG+ FQ+ D Sbjct: 155 DVYRIDQGIERYMIKTQKKTADFMEGCMELGGLLGDWQEDEIIELKKYGHALGMAFQITD 214 Query: 226 DLLDCEE 232 D++D E Sbjct: 215 DIMDYRE 221 >gi|213622139|ref|ZP_03374922.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 317 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 37 GGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 94 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 95 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 148 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + +++ L+ +G LG FQL DDLL Sbjct: 149 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLL 208 Query: 229 DCEED 233 D D Sbjct: 209 DYSAD 213 >gi|150395683|ref|YP_001326150.1| polyprenyl synthetase [Sinorhizobium medicae WSM419] gi|150027198|gb|ABR59315.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419] Length = 338 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L AS+F +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMLTLAAASMFGYEGDGHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A AS+ ++ L+ +G NLG+ FQL DD+L Sbjct: 175 DDYL------QVIRAKTAALFAAASEVGPIVASASKADRNALKSYGTNLGLAFQLVDDVL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|326382545|ref|ZP_08204236.1| polyprenyl synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326198664|gb|EGD55847.1| polyprenyl synthetase [Gordonia neofelifaecis NRRL B-59395] Length = 360 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 38/215 (17%) Query: 45 YALLGGKKIRSFLV---TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 + L GGK++R V C + ALRVGAAIE I +LIHDD+ +D R Sbjct: 43 FVLAGGKRVRPSFVYAGWRCGPDTAGDDTMALRVGAAIELIQACALIHDDI--LDRSDTR 100 Query: 102 RGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIIS--SPKTQLKDNIR 143 RG PTVH +++ + AI+ G+ L +A +++ P T + R Sbjct: 101 RGNPTVHRRFEGLHAGRRLTGDSAHYGVSAAILLGDLALAWADDLVHGIGPATDGWADPR 160 Query: 144 SQLMLSLTHNIGL------QGMLGGQMLDIQDEFI-DE--TQVFMIQKMKTGAL-MCFAC 193 L ++G+ +LGGQ+LDI +E DE T + + + KT A + Sbjct: 161 -----PLPRSVGVLWSRMRTEVLGGQLLDITNESSRDESVTAAYRVMEYKTAAYTVARPL 215 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + GA ++ A L G +LGI FQL DD+L Sbjct: 216 QLGAALSGADAALSGSLHRIGLDLGIAFQLRDDVL 250 >gi|312869707|ref|ZP_07729854.1| polyprenyl synthetase [Lactobacillus oris PB013-T2-3] gi|311094756|gb|EFQ53053.1| polyprenyl synthetase [Lactobacillus oris PB013-T2-3] Length = 327 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 24/191 (12%) Query: 49 GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK +R L+ + +F N +++ A+IE +H +LIHDD+ +D+ RRG Sbjct: 44 GGKYLRPALLLLTSQIFTPSSRNDERLIKLAASIEVLHMATLIHDDI--IDDSPERRGAV 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII-----SSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 ++ ++ + TA+ AG+ L T F+++ +SP Q+ Q+ L G L Sbjct: 102 SIQARFGKDTAVYAGDLLFTVFFDLLLEAIPASPYLQVNARAMRQI---------LDGEL 152 Query: 161 G--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 G Q ++Q D + KT AL A + GA A A+ + FG+ LG Sbjct: 153 GQMDQRFNLQQTLDD---YLANVRGKTAALFKLAAQEGAYFAAATTEQVASAAAFGQQLG 209 Query: 219 IIFQLADDLLD 229 I FQ+ DD+LD Sbjct: 210 IAFQMLDDILD 220 >gi|292669963|ref|ZP_06603389.1| heptaprenyl diphosphate synthase component II [Selenomonas noxia ATCC 43541] gi|292648375|gb|EFF66347.1| heptaprenyl diphosphate synthase component II [Selenomonas noxia ATCC 43541] Length = 349 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 12/184 (6%) Query: 49 GGKKIRS--FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R FLV + + A+ + AA+E +H SL+HDD+ +D RRG T Sbjct: 66 GGKRLRPALFLVAARGGT-SFDPARAMPIAAALELVHTASLVHDDV--IDEADTRRGAAT 122 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQML 165 + ++ AI+ G+ + AF++I+ ++ +QL+ +L+ LQ Q+ Sbjct: 123 ANAKWGNQIAILTGDYIFARAFKLIAEKGYDSSIYVKLAQLVCTLSEGEILQDHTVYQVP 182 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 DE+ + + KT + CE GA++ S ++ R+ +G+ LG+ FQ+ D Sbjct: 183 K------DESAYYERIRKKTADFLEICCELGAMIGGMSADDTARMAQYGQALGMAFQITD 236 Query: 226 DLLD 229 DLLD Sbjct: 237 DLLD 240 >gi|161616314|ref|YP_001590279.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194443184|ref|YP_002042563.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449256|ref|YP_002047334.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472845|ref|ZP_03078829.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736065|ref|YP_002116255.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195873559|ref|ZP_02697387.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197250149|ref|YP_002148230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264749|ref|ZP_03164823.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197301014|ref|ZP_02663064.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|198241919|ref|YP_002217276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386848|ref|ZP_03213460.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204931208|ref|ZP_03222002.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205357197|ref|ZP_02345799.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205358083|ref|ZP_02575589.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205358511|ref|ZP_02656973.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205359199|ref|ZP_02668072.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205359738|ref|ZP_02831626.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205360595|ref|ZP_02684656.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224585102|ref|YP_002638901.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|161365678|gb|ABX69446.1| hypothetical protein SPAB_04122 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401847|gb|ACF62069.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407560|gb|ACF67779.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459209|gb|EDX48048.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711567|gb|ACF90788.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633125|gb|EDX51539.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197213852|gb|ACH51249.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243004|gb|EDY25624.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289078|gb|EDY28447.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936435|gb|ACH73768.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603946|gb|EDZ02491.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204319975|gb|EDZ05181.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323255|gb|EDZ11094.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327615|gb|EDZ14379.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333924|gb|EDZ20688.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337771|gb|EDZ24535.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343490|gb|EDZ30254.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348475|gb|EDZ35106.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224469630|gb|ACN47460.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|312914332|dbj|BAJ38306.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087750|emb|CBY97514.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225271|gb|EFX50330.1| Octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615309|gb|EFY12230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618332|gb|EFY15223.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622863|gb|EFY19707.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626815|gb|EFY23612.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631384|gb|EFY28144.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635349|gb|EFY32063.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643348|gb|EFY39912.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647080|gb|EFY43581.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648883|gb|EFY45328.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655075|gb|EFY51386.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657678|gb|EFY53946.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664174|gb|EFY60372.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667457|gb|EFY63619.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674705|gb|EFY70797.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675662|gb|EFY71735.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682298|gb|EFY78321.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|323131665|gb|ADX19095.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195894|gb|EFZ81065.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199011|gb|EFZ84108.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204289|gb|EFZ89298.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207636|gb|EFZ92583.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323214747|gb|EFZ99496.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221227|gb|EGA05653.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323233295|gb|EGA17389.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239332|gb|EGA23382.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242417|gb|EGA26443.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323255257|gb|EGA39034.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262720|gb|EGA46276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264030|gb|EGA47538.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269416|gb|EGA52871.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625055|gb|EGE31400.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629328|gb|EGE35671.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 370 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 10/204 (4%) Query: 32 QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 Q + +L++ + Y ++ GGK+IR + A + + A IE IH +L+H Sbjct: 71 QLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLH 130 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D +RRGK T + + +++ G+ + T AF++++S +++ ++S Sbjct: 131 DDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTS-----LGSLKVLEVMS 183 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 N+ +G + Q++++ D I E + KT L A + I+A + +++ Sbjct: 184 EAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKG 242 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 L+ +G LG FQL DDLLD D Sbjct: 243 LQDYGRYLGTAFQLIDDLLDYSAD 266 >gi|257054406|ref|YP_003132238.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] gi|256584278|gb|ACU95411.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] Length = 337 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 18/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R + T A+ F + AA+E +H +L HDD+ MD +RRG P+ Sbjct: 59 GGKRFRP-MFTLLAAQFGTGGRRDDVITAAAAVELVHLATLYHDDV--MDEATMRRGAPS 115 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 V+ ++D AI+ G+ L +A +++ T I +T GQM + Sbjct: 116 VNARWDNSVAILTGDYLFAHASRLVADLGTDAARIIAETFGELVT----------GQMRE 165 Query: 167 IQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D+ V + KTG+L+ A G + + AS E LR FG+ +G FQ+ Sbjct: 166 TVGPGADDDHVEHYLSVIAQKTGSLIATAGRFGGMFSGASPEHVEALRRFGDIIGTAFQI 225 Query: 224 ADDLLD 229 +DD++D Sbjct: 226 SDDIID 231 >gi|156120113|gb|ABG57080.2| Hep2 [Heliophilum fasciatum] Length = 320 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 8/211 (3%) Query: 26 QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85 + +++M T H ++ GGK++R V N + L + +E IH Sbjct: 19 ELSNYMDTDHPTLTAASGHLLYAGGKRLRPAFVLLAGRFHNYSFERLLPLAVTMEMIHMA 78 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 +L+HDD+ +D RRG PTV ++ ++ AG+ L + +I+ + + ++ Sbjct: 79 TLVHDDV--IDESETRRGTPTVRARWGNRVSMHAGDHLFARSLLLIAEMNNPIIARVLAE 136 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 + + +Q M D++ F D ++ I++ KT L+ +C+ GA+ A Sbjct: 137 TSVEMCEG-EIQQM--ATAFDVEQNFRD--YLYRIKR-KTALLLSASCQLGAVAVDAPPY 190 Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ +G +LG+ FQ+ DD+LD E D K Sbjct: 191 MIRALKWYGYHLGMAFQVTDDILDLEADEAK 221 >gi|289642098|ref|ZP_06474250.1| Polyprenyl synthetase [Frankia symbiont of Datisca glomerata] gi|289508061|gb|EFD29008.1| Polyprenyl synthetase [Frankia symbiont of Datisca glomerata] Length = 338 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 11/188 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A L A+E +H +SL+HDDL MD RR +PT Sbjct: 53 GGKLVRPALALLSAEAAGAAVEVGLPGAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+AG+ LL A +++ + + + R+ +ML G+Q ++ GQ D+ Sbjct: 111 TVFGADGAILAGDALLGLATQVLL--EVEGEPGRRAAIML----GAGVQDLVRGQAEDLY 164 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E ++ V ++ KTGAL+ + GA++A + L FG LG FQL D Sbjct: 165 FETRNDVTVADTLTMEDGKTGALLSCSAAIGAVLAGGRTELVDGLAEFGSRLGTAFQLVD 224 Query: 226 DLLDCEED 233 DLL D Sbjct: 225 DLLGIWGD 232 >gi|219129739|ref|XP_002185039.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403534|gb|EEC43486.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 325 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 31/201 (15%) Query: 49 GGKKIRSFLVTECASLFNVNHL----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGKK+R +V + N R+ E IH SL HDD+ +D RRG Sbjct: 42 GGKKVRPMMVLLLSRALNWQRSDLPQAQRRLAEISEMIHTASLFHDDV--IDGAETRRGA 99 Query: 105 PTVHIQYDEVTAIIAGNGLLTYA---------FEIISSPKTQLKDNIRSQLMLSLTHNIG 155 P+VH+ + AI+AG+ LL A E++ + T ++ +R ++M Sbjct: 100 PSVHMVFGNKMAILAGDYLLARASICLARLRNVEVVETMSTIIEHLVRGEVM-------Q 152 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCF 213 L+G E E V+ ++K KTG+LM +C+S A++ + F Sbjct: 153 LRG-------STSSERSGERLVYYLRKNFYKTGSLMANSCKSAALLGEYPNELVDASYRF 205 Query: 214 GENLGIIFQLADDLLDCEEDL 234 G+++G+ FQL DD+LD E L Sbjct: 206 GKHVGMAFQLVDDVLDFEGSL 226 >gi|257387323|ref|YP_003177096.1| polyprenyl synthetase [Halomicrobium mukohataei DSM 12286] gi|257169630|gb|ACV47389.1| Polyprenyl synthetase [Halomicrobium mukohataei DSM 12286] Length = 281 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 93/201 (46%), Gaps = 14/201 (6%) Query: 37 DRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L +R+ AL GGK++R + A+ IE +H SL+ DD+ + Sbjct: 26 DELADEVRHVALAGGKRVRPTVTVLVCEALGGEPADAVEFAVGIELVHNASLVIDDI--I 83 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D +RRG P+ + AIIA +GLL AF + SS + ++ S + L Sbjct: 84 DESDVRRGTPSAWAAFGHGPAIIASDGLLGEAFALFSSDERAMQAVTESMVELG------ 137 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 G+ ++ + +ET+ + + KTGAL A E GAI A A E + E Sbjct: 138 -----EGEATELVSQPTNETEYIELARRKTGALFRAAAELGAIAADADAYTVEAFGQYAE 192 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +G+ FQ+ DD+LD D K Sbjct: 193 RVGVAFQMRDDVLDATADAEK 213 >gi|121998628|ref|YP_001003415.1| trans-hexaprenyltranstransferase [Halorhodospira halophila SL1] gi|121590033|gb|ABM62613.1| Trans-hexaprenyltranstransferase [Halorhodospira halophila SL1] Length = 323 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V A +++ A IE IH +L+HDD+ +D +RRGK T H Sbjct: 43 GGKRLRPMVVLLAARACGYQGKDHVQLAAIIEFIHTATLLHDDV--VDGSDMRRGKQTAH 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AFE++ +L +++ T+ I ++ Q++++ Sbjct: 101 TIWGNEASVLVGDFLYTRAFEMM----VELDSMAVLRILARATNTIARGEVM--QLMNVH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + E + KT L C++GA++A E L +G +LG +QL DD L Sbjct: 155 EPDLTEADYRQVIYRKTATLFEAGCQNGAVLAGLDDAGCEALAAYGRHLGTAYQLVDDAL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSGD 219 >gi|328676037|gb|AEB28712.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida 3523] Length = 325 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N N L A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 44 GGKRLRPLLVMLFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ S DN++ Q++ T+ I +L Q+L+ Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN---EKERLRCFGENLGIIFQLA 224 ++ + E + KT L ACE +++ Q+ ++ +R +G LG FQ+A Sbjct: 155 RNSELSEEDYIKVIYCKTAKLFEAACELAGVISLDKQSYAKYQDNIRNYGVYLGNAFQIA 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDVLDYVSD 223 >gi|229029293|ref|ZP_04185383.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH1271] gi|228732041|gb|EEL82933.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH1271] Length = 320 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|62181813|ref|YP_218230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62129446|gb|AAX67149.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|267995503|gb|ACY90388.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|322716302|gb|EFZ07873.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 381 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 10/198 (5%) Query: 38 RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ + Sbjct: 88 QLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--V 145 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D +RRGK T + + +++ G+ + T AF++++S + ++ ++S N+ Sbjct: 146 DESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVI 200 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 +G + Q++++ D I E + KT L A + I+A + +++ L+ +G Sbjct: 201 AEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGR 259 Query: 216 NLGIIFQLADDLLDCEED 233 LG FQL DDLLD D Sbjct: 260 YLGTAFQLIDDLLDYSAD 277 >gi|297203852|ref|ZP_06921249.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083] gi|197711907|gb|EDY55941.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083] Length = 378 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + T + A+E +H +SL+HDDL MD RR + TV Sbjct: 87 GGKAVRPALAVLSAEVTGAAPETGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 144 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T +L + + ++ GQ DI Sbjct: 145 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTTAT------RALIDGQAQDIS 198 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 199 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLEKYGYHLGLAFQAVD 258 Query: 226 DLL 228 DLL Sbjct: 259 DLL 261 >gi|228907246|ref|ZP_04071106.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis IBL 200] gi|228852386|gb|EEM97180.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis IBL 200] Length = 320 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|228978217|ref|ZP_04138594.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis Bt407] gi|228781234|gb|EEM29435.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis Bt407] gi|326939231|gb|AEA15127.1| farnesyltransferase [Bacillus thuringiensis serovar chinensis CT-43] Length = 320 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|228920324|ref|ZP_04083671.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229043359|ref|ZP_04191076.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH676] gi|229109069|ref|ZP_04238669.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock1-15] gi|229126927|ref|ZP_04255938.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-Cer4] gi|229144212|ref|ZP_04272626.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-ST24] gi|229149811|ref|ZP_04278040.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus m1550] gi|228633675|gb|EEK90275.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus m1550] gi|228639220|gb|EEK95636.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-ST24] gi|228656527|gb|EEL12354.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-Cer4] gi|228674347|gb|EEL29591.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock1-15] gi|228725940|gb|EEL77180.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH676] gi|228839347|gb|EEM84641.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 305 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 28 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 84 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLD 166 + ++ + A+ G+ L + E I+ NI + +L+H I + G++ Sbjct: 85 NAKWGDRIAMYTGDYLFAKSLECIT--------NIEIPEAHQALSHTI--LEVCKGEIEQ 134 Query: 167 IQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 135 IKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQI 194 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 195 IDDILDFVSTEEKLGK 210 >gi|117927490|ref|YP_872041.1| trans-hexaprenyltranstransferase [Acidothermus cellulolyticus 11B] gi|117647953|gb|ABK52055.1| Trans-hexaprenyltranstransferase [Acidothermus cellulolyticus 11B] Length = 349 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 21/235 (8%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61 + GL +++++ + ++T+L + + T+ + L+ A GGK+ R LV Sbjct: 29 DAGLRTRVRDGLEAVETLLRQAVRSSGYPFLTETSRHLVEA------GGKRFRPLLVLLA 82 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A + + A +E H +L HDD+ MD +RRG + + ++ AI+ G+ Sbjct: 83 AEYGDPTAPGVVPAAAVVELTHLATLYHDDV--MDEAVVRRGTASANARWSNTIAILTGD 140 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L + A ++++ + +R Q + ++ GQ+ + +E +D + ++ Sbjct: 141 FLFSRASDLLADLGPE---AVRIQART-------FERLVQGQIRETLGPEEGVDPVEHYL 190 Query: 180 -IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTG+L+ A GA+ + A + + +GE +G FQL+DDLLD D Sbjct: 191 RVVADKTGSLIATAARFGAMFSGAPAWIVDVMVTYGERIGTAFQLSDDLLDVMSD 245 >gi|294671407|ref|ZP_06736256.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306884|gb|EFE48127.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 353 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 15/219 (6%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74 R+D +++ + Q+ + +Q ++SA GGK++R + ++ Sbjct: 47 RVDVVINRAV-QSEVALISQIGTYIISA------GGKRLRPVITILSGRALGCDNDGLYS 99 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L T AF+++ Sbjct: 100 LAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVGS 157 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 + ++ +++ NI +G + Q+++I + I E Q + + KT L A + Sbjct: 158 GS-----MKILEVMADATNIIAEGEVM-QLMNIGNIDITEAQYLQVIQYKTAKLFEAAAQ 211 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAI+A AS ++ LR +G +G FQ+ DD+LD D Sbjct: 212 VGAILAGASAEQEAALRDYGMYVGTAFQIIDDVLDYSGD 250 >gi|229172251|ref|ZP_04299815.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus MM3] gi|228611239|gb|EEK68497.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus MM3] Length = 320 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|88607961|ref|YP_506132.1| polyprenyl synthetase family protein [Neorickettsia sennetsu str. Miyayama] gi|88600130|gb|ABD45598.1| polyprenyl synthetase family protein [Neorickettsia sennetsu str. Miyayama] Length = 321 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 22/231 (9%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + E + ++ +L D + ++ ++LS+ GK+IR+ L +L Sbjct: 7 LNASFSEKLRSVEEVLHDSMTTFTKLKSIEYAKKMLSS-------GKRIRALLSLLSFAL 59 Query: 65 -FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 N + +R A IE IH +L+HDD+ +D IRRGKP + + +++ G+ L Sbjct: 60 CKNADTNAEIRAAATIELIHNATLMHDDV--VDENSIRRGKPNIKSIHGNKISVLTGDFL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 L+ AFEII K N+ L+LS T + + G+ML +Q E + E++ + Sbjct: 118 LSVAFEIILECK-----NLSVVLLLSKTA----KQLSEGEMLQLQSIGEIVSESEYLEVI 168 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L A E AI+ Q LR G +G+ FQ+ DD+LD E Sbjct: 169 ARKTAVLFSAAAEIAAILT-GKQEYVVILREIGFLIGMAFQITDDVLDYGE 218 >gi|229069166|ref|ZP_04202457.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus F65185] gi|228713918|gb|EEL65802.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus F65185] Length = 320 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|209693963|ref|YP_002261891.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238] gi|208007914|emb|CAQ78045.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238] Length = 323 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T +F++++S + I+ ++S + N+ +G + Q+++ Sbjct: 101 AEFGNAASVLVGDFIYTRSFQMMTSLGS-----IKILSLMSESVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ +ASQ + L+ +G+ LG FQL DD++ Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILNNASQEIETALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|218896543|ref|YP_002444954.1| heptaprenyl diphosphate synthase component II [Bacillus cereus G9842] gi|228964588|ref|ZP_04125697.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|218541188|gb|ACK93582.1| heptaprenyl diphosphate synthase component II [Bacillus cereus G9842] gi|228795122|gb|EEM42619.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar sotto str. T04001] Length = 320 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|218233341|ref|YP_002366295.1| heptaprenyl diphosphate synthase component II [Bacillus cereus B4264] gi|228957889|ref|ZP_04119629.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229178021|ref|ZP_04305393.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus 172560W] gi|229189695|ref|ZP_04316709.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC 10876] gi|296502183|ref|YP_003663883.1| farnesyltransferase [Bacillus thuringiensis BMB171] gi|218161298|gb|ACK61290.1| heptaprenyl diphosphate synthase component II [Bacillus cereus B4264] gi|228593744|gb|EEK51549.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC 10876] gi|228605509|gb|EEK62958.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus 172560W] gi|228801805|gb|EEM48682.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|296323235|gb|ADH06163.1| farnesyltransferase [Bacillus thuringiensis BMB171] Length = 320 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|229078796|ref|ZP_04211349.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock4-2] gi|228704478|gb|EEL56911.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock4-2] Length = 305 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 28 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 84 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 85 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 135 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 136 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 195 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 196 DDILDFVSTEEKLGK 210 >gi|42780715|ref|NP_977962.1| heptaprenyl diphosphate synthase component II [Bacillus cereus ATCC 10987] gi|42736635|gb|AAS40570.1| heptaprenyl diphosphate synthase component II [Bacillus cereus ATCC 10987] Length = 320 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYDYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|296447427|ref|ZP_06889352.1| Geranyltranstransferase [Methylosinus trichosporium OB3b] gi|296255047|gb|EFH02149.1| Geranyltranstransferase [Methylosinus trichosporium OB3b] Length = 338 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + ++ A IE +H +L+HDD+ +D +RRGK Sbjct: 57 GGKRLRPMLVLATAGMCGYRGDGHIKFAAGIEFMHTATLLHDDV--VDESDMRRGKIAAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + T ++ G+ LL +AF+++ P ++ SQ + LQ + + Sbjct: 115 MLWGNETCVLVGDFLLGHAFKMMVEPGVLPCLSVVSQAAAVIAEGEILQ------LNSAK 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L A E G +++ + ++ R +G NLGI FQL DD L Sbjct: 169 DTQTTEDAYMAVIRSKTAELFAAAAEVGPMLSGRPKADEAACRSYGMNLGIAFQLIDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|228900194|ref|ZP_04064426.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis IBL 4222] gi|228859464|gb|EEN03892.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis IBL 4222] Length = 320 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|52143833|ref|YP_082994.1| heptaprenyl diphosphate synthase component II [Bacillus cereus E33L] gi|51977302|gb|AAU18852.1| heptaprenyl diphosphate synthase component II [Bacillus cereus E33L] Length = 323 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 46 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 102 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 103 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 153 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 154 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 213 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 214 DDILDFVSTEEKLGK 228 >gi|30019662|ref|NP_831293.1| farnesyltransferase [Bacillus cereus ATCC 14579] gi|29895206|gb|AAP08494.1| Farnesyltransferase [Bacillus cereus ATCC 14579] Length = 323 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 46 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 102 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 103 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 153 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 154 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 213 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 214 DDILDFVSTEEKLGK 228 >gi|75762755|ref|ZP_00742585.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase / Farnesyltransferase / Heptaprenyl diphosphate synthase component II [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489758|gb|EAO53144.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase / Farnesyltransferase / Heptaprenyl diphosphate synthase component II [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 323 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 46 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 102 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 103 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 153 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 154 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 213 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 214 DDILDFVSTEEKLGK 228 >gi|302876186|ref|YP_003844819.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] gi|307686918|ref|ZP_07629364.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] gi|302579043|gb|ADL53055.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] Length = 795 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 9/200 (4%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 D + +A Y+L G GK++R + + + L + ++E +H SLI DDLP+ Sbjct: 533 DFISNAANYSLRGDGKRLRPIMAWVMGVKEYGLKESEMLPLLRSLEYMHTASLIFDDLPA 592 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHN 153 DN IRRG+PTVH Y+ A + G L A E +T L+ ++R+ L L Sbjct: 593 QDNADIRRGRPTVHKVYNVAIAELTGLFLTQKAIE----EQTFLQQFDLRNVLKLIRYST 648 Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + GQ +D++ + T Q+ M+ KTG A AI+A Q E E L+ Sbjct: 649 ETTADLCKGQTMDLEAKGKQLTLEQLNMMCFYKTGKGFEAALMMPAILAARDQVEMEALK 708 Query: 212 CFGENLGIIFQLADDLLDCE 231 F + GI FQ+ DDLLD E Sbjct: 709 KFSYHAGIAFQIKDDLLDVE 728 >gi|325134983|gb|EGC57614.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M13399] gi|325202853|gb|ADY98307.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240149] gi|325208846|gb|ADZ04298.1| octaprenyl-diphosphate synthase [Neisseria meningitidis NZ-05/33] Length = 324 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|228938725|ref|ZP_04101329.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971607|ref|ZP_04132230.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228788130|gb|EEM36086.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820966|gb|EEM66987.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 305 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 28 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 84 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLD 166 + ++ + A+ G+ L + E I+ NI + +L+H I + G++ Sbjct: 85 NAKWGDRIAMYTGDYLFAKSLECIT--------NIEIPEAHQALSHTI--LEVCKGEIEQ 134 Query: 167 IQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 135 IKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQI 194 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 195 IDDILDFVSTEEKLGK 210 >gi|282165107|ref|YP_003357492.1| polyprenyl synthetase [Methanocella paludicola SANAE] gi|282157421|dbj|BAI62509.1| polyprenyl synthetase [Methanocella paludicola SANAE] Length = 313 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 9/192 (4%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +RYAL L GK+IR+ ++T + A+ A+E +H SL+ DD+ +D Sbjct: 35 LSEVVRYALSLKGKRIRTTVLTLSCEAAGGDMERAMAPAMAVEMLHNTSLVLDDI--IDK 92 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 IRRGK T++ ++ A+IA + +L+ A I+ L ++ M+ + L+ Sbjct: 93 SDIRRGKATINNRWGNEMALIACDVMLSLAIREITRSDLGL-----TKQMIDCVADSMLR 147 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 + G+ L+++ + + I KT +L + ESGA++ +A Q + L+ +G +L Sbjct: 148 -LAEGEALELEKKKFTIDDYYKIADKKTASLFSASAESGALVGNADQKYVKALQQYGRSL 206 Query: 218 GIIFQLADDLLD 229 G+ FQ DD+LD Sbjct: 207 GLAFQARDDILD 218 >gi|9711345|dbj|BAB07816.1| geranyl geranyl diphosphate synthase [Kitasatospora griseola] Length = 348 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 87/182 (47%), Gaps = 12/182 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR+ L A + A+ A+E +H +SL+HDD+ MD RRG+PTV Sbjct: 65 GKMIRAALTVLAAEACGGDVQRAVCGAVAVELVHNFSLLHDDV--MDGDLERRGRPTVWA 122 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 AI+AG+ LL I+ R+ LT I + GQM D+ Sbjct: 123 TLGVPAAILAGDVLLARGCAILEGDSEH-----RTWATELLTETIAT--LAEGQMADVAF 175 Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E I + + + KT AL+ ACE GA ++ +ERL FG +LG+ FQL DD Sbjct: 176 EHRTTISLEEALAVSEAKTAALLSCACELGAGLSGGGAEARERLAKFGWHLGMAFQLVDD 235 Query: 227 LL 228 +L Sbjct: 236 VL 237 >gi|229016870|ref|ZP_04173798.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH1273] gi|229023076|ref|ZP_04179590.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH1272] gi|228738222|gb|EEL88704.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH1272] gi|228744431|gb|EEL94505.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH1273] Length = 320 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 106/195 (54%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ ++ D ++ L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITN--IEIPDAHQA-----LSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|222054630|ref|YP_002536992.1| Polyprenyl synthetase [Geobacter sp. FRC-32] gi|221563919|gb|ACM19891.1| Polyprenyl synthetase [Geobacter sp. FRC-32] Length = 322 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L+ A L + + + IE IH +L+HDD+ +DN +RRG + + Sbjct: 41 GGKRIRPALLLLSAKLCGYTGNRNVALASVIEFIHTATLLHDDV--VDNANLRRGIASAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F ++ + +++ +LS I +G + Q++ Sbjct: 99 TLWGNEASVLVGDFLFSKSFSLMVADG-----DLKILKVLSGATTIIAEGEVL-QLICTS 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + K KT L+ AC+SGAI+ AS + L+ FG +LGI FQL DD L Sbjct: 153 DLDLTLERYIEVVKAKTAILLSAACQSGAILGQASSQHETALQEFGMDLGIAFQLMDDTL 212 Query: 229 D 229 D Sbjct: 213 D 213 >gi|148273991|ref|YP_001223552.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831921|emb|CAN02892.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 357 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 93/199 (46%), Gaps = 19/199 (9%) Query: 44 RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 RY L GGK++R L A L N + AIE H SL HDD+ MD +RR Sbjct: 64 RYLLAAGGKRVRPMLALLIAQLGEGNTQQVVDAAVAIEITHLASLYHDDV--MDEADMRR 121 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKT-QLKDNIRSQLMLSLTH-NIGLQG 158 G P+ + AI+AG+ L A +I++ P+ +L+ +L+L H IG + Sbjct: 122 GVPSAQAVWGNSVAILAGDLLFARASKIVADLGPRAIRLQAATFERLVLGQLHETIGPR- 180 Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 D QD + KTG+L+ A + G I + A + + FGE G Sbjct: 181 -------DDQDPI---EHYLDVLADKTGSLIACAAQMGVIYSGADPELESAVLAFGERTG 230 Query: 219 IIFQLADDLLDCEEDLPKK 237 + FQL DD+LD D P++ Sbjct: 231 VAFQLVDDVLDL-ADQPEE 248 >gi|163939429|ref|YP_001644313.1| heptaprenyl diphosphate synthase component II [Bacillus weihenstephanensis KBAB4] gi|229010921|ref|ZP_04168117.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides DSM 2048] gi|229058249|ref|ZP_04196637.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH603] gi|229132421|ref|ZP_04261275.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-ST196] gi|229166460|ref|ZP_04294216.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH621] gi|163861626|gb|ABY42685.1| Heptaprenyl diphosphate synthase component II [Bacillus weihenstephanensis KBAB4] gi|228617034|gb|EEK74103.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH621] gi|228651127|gb|EEL07108.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-ST196] gi|228720113|gb|EEL71697.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus AH603] gi|228750321|gb|EEM00151.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides DSM 2048] Length = 320 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 106/195 (54%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ ++ D ++ L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITN--IEIPDAHQA-----LSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|118477067|ref|YP_894218.1| heptaprenyl diphosphate synthase, component II [Bacillus thuringiensis str. Al Hakam] gi|118416292|gb|ABK84711.1| heptaprenyl diphosphate synthase, component II [Bacillus thuringiensis str. Al Hakam] Length = 323 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 46 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 102 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 103 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 153 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 154 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 213 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 214 DDILDFVSTEEKLGK 228 >gi|21674031|ref|NP_662096.1| polyprenyl synthetase [Chlorobium tepidum TLS] gi|21647180|gb|AAM72438.1| polyprenyl synthetase [Chlorobium tepidum TLS] Length = 324 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 23/201 (11%) Query: 44 RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 RY L GK+IR LV A + H R +E +H +LIHDD+ +D +RR Sbjct: 37 RYVLRQQGKQIRPTLVILAAKVCGGVHDVTYRGAIMVELLHSATLIHDDV--VDGAEMRR 94 Query: 103 GKPTVHIQYDEVTAIIAGNGLLT----YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 G P+++ + +++ G+ LL+ Y+ E + RS ++S ++ Sbjct: 95 GIPSINALWKNKISVLIGDYLLSKGLLYSLE---------NKDYRSLHLVSE----AVRR 141 Query: 159 MLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 M G++L IQ I E + KTG+L+ +C GA + S++E L+ +GE Sbjct: 142 MSEGEILQIQKTRSLDITEEDYLSVIADKTGSLIATSCAIGAASSTDSEDEIASLKSYGE 201 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 LG+ FQ+ DDLLD D K Sbjct: 202 FLGLAFQIRDDLLDYTGDSKK 222 >gi|30261609|ref|NP_843986.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Ames] gi|47526809|ref|YP_018158.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. 'Ames Ancestor'] gi|65318879|ref|ZP_00391838.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis str. A2012] gi|165869531|ref|ZP_02214190.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0488] gi|167633294|ref|ZP_02391619.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0442] gi|167639098|ref|ZP_02397371.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0193] gi|170686048|ref|ZP_02877270.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0465] gi|170706518|ref|ZP_02896978.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0389] gi|177650331|ref|ZP_02933298.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0174] gi|190568668|ref|ZP_03021573.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis Tsiankovskii-I] gi|196033307|ref|ZP_03100719.1| heptaprenyl diphosphate synthase component II [Bacillus cereus W] gi|196038886|ref|ZP_03106193.1| heptaprenyl diphosphate synthase component II [Bacillus cereus NVH0597-99] gi|196046652|ref|ZP_03113876.1| heptaprenyl diphosphate synthase component II [Bacillus cereus 03BB108] gi|206975027|ref|ZP_03235942.1| heptaprenyl diphosphate synthase component II [Bacillus cereus H3081.97] gi|218902725|ref|YP_002450559.1| heptaprenyl diphosphate synthase component II [Bacillus cereus AH820] gi|222095243|ref|YP_002529303.1| heptaprenyl diphosphate synthase component ii [Bacillus cereus Q1] gi|225863477|ref|YP_002748855.1| heptaprenyl diphosphate synthase component II [Bacillus cereus 03BB102] gi|227815639|ref|YP_002815648.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. CDC 684] gi|228932902|ref|ZP_04095767.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229195814|ref|ZP_04322574.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus m1293] gi|229602685|ref|YP_002866017.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0248] gi|254683101|ref|ZP_05146962.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. CNEVA-9066] gi|254723689|ref|ZP_05185475.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A1055] gi|254734450|ref|ZP_05192162.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Western North America USA6153] gi|254740861|ref|ZP_05198549.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Kruger B] gi|254755099|ref|ZP_05207133.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Vollum] gi|254759636|ref|ZP_05211660.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Australia 94] gi|301053151|ref|YP_003791362.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis CI] gi|30255463|gb|AAP25472.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Ames] gi|47501957|gb|AAT30633.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. 'Ames Ancestor'] gi|164714971|gb|EDR20489.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0488] gi|167512888|gb|EDR88261.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0193] gi|167531332|gb|EDR94010.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0442] gi|170128616|gb|EDS97483.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0389] gi|170669745|gb|EDT20486.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0465] gi|172083475|gb|EDT68535.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0174] gi|190560268|gb|EDV14248.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis Tsiankovskii-I] gi|195993741|gb|EDX57697.1| heptaprenyl diphosphate synthase component II [Bacillus cereus W] gi|196022585|gb|EDX61268.1| heptaprenyl diphosphate synthase component II [Bacillus cereus 03BB108] gi|196030031|gb|EDX68631.1| heptaprenyl diphosphate synthase component II [Bacillus cereus NVH0597-99] gi|206747046|gb|EDZ58438.1| heptaprenyl diphosphate synthase component II [Bacillus cereus H3081.97] gi|218538499|gb|ACK90897.1| heptaprenyl diphosphate synthase component II [Bacillus cereus AH820] gi|221239301|gb|ACM12011.1| heptaprenyl diphosphate synthase component II [Bacillus cereus Q1] gi|225790502|gb|ACO30719.1| heptaprenyl diphosphate synthase component II [Bacillus cereus 03BB102] gi|227004676|gb|ACP14419.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. CDC 684] gi|228587711|gb|EEK45769.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus m1293] gi|228826705|gb|EEM72474.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229267093|gb|ACQ48730.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. A0248] gi|300375320|gb|ADK04224.1| heptaprenyl diphosphate synthase component II [Bacillus cereus biovar anthracis str. CI] gi|324325630|gb|ADY20890.1| heptaprenyl diphosphate synthase component II [Bacillus thuringiensis serovar finitimus YBT-020] Length = 320 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|239929586|ref|ZP_04686539.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC 14672] gi|291437911|ref|ZP_06577301.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC 14672] gi|291340806|gb|EFE67762.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC 14672] Length = 336 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVMLSAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVASAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++D A++ G+ L + A I++ + +R Q + ++ GQ+L Sbjct: 111 ARWDNSVAVLTGDFLFSRASHILADLGPE---AVRVQAE-------AFERLVTGQILETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ +C GA+M+ + + L +GE LG+ Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGTDETVVDVLTQYGERLGV 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDIASD 228 >gi|49184441|ref|YP_027693.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Sterne] gi|49481018|ref|YP_035730.1| heptaprenyl diphosphate synthase component II [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49178368|gb|AAT53744.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis str. Sterne] gi|49332574|gb|AAT63220.1| heptaprenyl diphosphate synthase component II [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 323 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 46 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 102 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 103 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 153 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 154 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 213 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 214 DDILDFVSTEEKLGK 228 >gi|296104900|ref|YP_003615046.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059359|gb|ADF64097.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 323 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAILAARAVGYQGKAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTAAQEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|32474678|ref|NP_867672.1| polyprenyl synthase [Rhodopirellula baltica SH 1] gi|32445217|emb|CAD75219.1| polyprenyl synthase [Rhodopirellula baltica SH 1] Length = 397 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 22/200 (11%) Query: 48 LGGKKIRSFLVTECASLFNV-----NHLTA---------LRVGAAIECIHCYSLIHDDLP 93 LGGK++R L+ + + N LT + + +E +H +LIHDD+ Sbjct: 103 LGGKRLRPALLLLSGAAMHADRTSKNPLTTEELATTEDHIVMATVVEMVHTATLIHDDV- 161 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +D RR PT++ ++++ T+I+ G+ L +F + ++ + L + Q + Sbjct: 162 -LDKAATRRHVPTINARWNDDTSILLGDYLFAQSFYLAATLPSTLACRLVGQAAQKVCEG 220 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 L+ +LG LDI DE I + KT L +C+ GA ++ +++ E F Sbjct: 221 -ELRQVLGRDWLDI-----DEETYLDIIRGKTAELTRVSCQIGADLSGGDESQVEAFARF 274 Query: 214 GENLGIIFQLADDLLDCEED 233 G +LGI FQ+ADD LD D Sbjct: 275 GNDLGIAFQIADDFLDLWGD 294 >gi|296535664|ref|ZP_06897840.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957] gi|296264015|gb|EFH10464.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957] Length = 347 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A L + + A +E IH +L+HDD+ +D +RRG+ + + Sbjct: 66 GGKRLRPLLVLAAARLCGYRGQRHVGLAACVEFIHTATLLHDDV--VDESDLRRGQASAN 123 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L AF+++++ + ++ D ++ + I +L Q++ Sbjct: 124 AIFGNKASVLVGDFLFARAFQLMTADGSLEVLD-----ILCGASATIAEGEVL--QLVIQ 176 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E Q + + KT AL A GA++A + E + L +G N GI FQL DD Sbjct: 177 NDTSSTEAQYLEVIEGKTAALFAAATRVGAVVAERPKAEADALEAYGRNFGIAFQLVDDA 236 Query: 228 LD 229 LD Sbjct: 237 LD 238 >gi|254805638|ref|YP_003083859.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14] gi|254669180|emb|CBA07918.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14] gi|325145122|gb|EGC67404.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240013] gi|325205404|gb|ADZ00857.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M04-240196] Length = 324 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDEKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|193070326|ref|ZP_03051269.1| octaprenyl-diphosphate synthase [Escherichia coli E110019] gi|192956385|gb|EDV86845.1| octaprenyl-diphosphate synthase [Escherichia coli E110019] Length = 323 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+ + E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILVGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|329956361|ref|ZP_08296958.1| polyprenyl synthetase [Bacteroides clarus YIT 12056] gi|328524258|gb|EGF51328.1| polyprenyl synthetase [Bacteroides clarus YIT 12056] Length = 324 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 14/186 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A L+N L A+E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILVLLAAKLYNEICPATLHAAVALELLHTASLVHDDV--VDESTERRGQLSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166 ++ A++ G+ LL A + R+ ++ + N+G Q + G++L + Sbjct: 103 IFNNKVAVLTGDYLLATALVEVGMT--------RNYAIIDVVSNLG-QDLAEGELLQLSN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + E F + + KT L ++GA+ AS + E R FGE +G+ FQ+ DD Sbjct: 154 VSNPEYSEDIYFDVIRKKTAVLFAACMKAGALSVGASDEKAEYARLFGEYIGLCFQIKDD 213 Query: 227 LLDCEE 232 + D E Sbjct: 214 IFDYYE 219 >gi|269837416|ref|YP_003319644.1| polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745] gi|269786679|gb|ACZ38822.1| Polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745] Length = 346 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 10/184 (5%) Query: 50 GKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK+IR + V CA+ + A+ A+IE +H ++L+HDD+ D RR +PTV Sbjct: 57 GKRIRPLICVLACAAAGG-DPDVAVPTAASIELLHNFTLVHDDV--QDGSDRRRHRPTVW 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNIGLQGMLGGQMLDI 167 + AI AG+ L +A + + + ++++ ++ N + ++ GQ+LD+ Sbjct: 114 ALWGVGQAINAGDAL--FALSQLPLLGSHARGVPPARVIGVAREFNATVLRIVEGQVLDL 171 Query: 168 QDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E E V M KT +L+ FA SGA++A A ER R FG LG+ FQ+ Sbjct: 172 CFEERWEIPVASYLNMIEGKTASLVAFAAWSGAVLAGADAERAERYRAFGRALGLGFQVQ 231 Query: 225 DDLL 228 DDLL Sbjct: 232 DDLL 235 >gi|47565976|ref|ZP_00237014.1| heptaprenyl diphosphate syntase component II [Bacillus cereus G9241] gi|228984692|ref|ZP_04144865.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229155179|ref|ZP_04283291.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC 4342] gi|47556893|gb|EAL15223.1| heptaprenyl diphosphate syntase component II [Bacillus cereus G9241] gi|228628306|gb|EEK85021.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC 4342] gi|228775086|gb|EEM23479.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 320 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|293398312|ref|ZP_06642503.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62] gi|291611236|gb|EFF40320.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62] Length = 324 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|119504128|ref|ZP_01626209.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080] gi|119460131|gb|EAW41225.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080] Length = 297 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 13/200 (6%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSM 95 L A+ YA+ GG ++R L A L N N L AA IE +HC SL+HDDLP Sbjct: 33 LAKALDYAVFPGGARVRPRLCLAVA-LANGNSEPRLASAAAAAIELLHCASLVHDDLPCF 91 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNI 154 D+ RRGKP++H + + A+++G+ L+ AF+ ++ + + +R +Q+ + + Sbjct: 92 DDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVRMAQVTAIVAAGV 151 Query: 155 -GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G G+ GQ + + ++ + KTGAL A +GA A E R Sbjct: 152 GGPMGICAGQAWECE----PRVELEHYHQAKTGALFVAATCAGAAAAGVP---SEPWREL 204 Query: 214 GENLGIIFQLADDLLDCEED 233 G ++G +Q+ADD+ D D Sbjct: 205 GNSIGEAYQVADDIQDAIAD 224 >gi|14625004|dbj|BAB61882.1| farnesyl diphosphate synthase [Rhodovulum strictum] Length = 138 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 7/127 (5%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG PTVH+++DE TA++ G+ L T AFE+++ P +R L+ +L G+ GM Sbjct: 12 LRRGLPTVHLKWDEGTALLVGDALQTLAFEMLADPACHPDPAVRIDLVAALARASGIDGM 71 Query: 160 LGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + GQ DI E ++ +Q KTGAL+ ++ E+GA + A + L + Sbjct: 72 VLGQAQDIAAETAGRALSLAEITELQANKTGALIRWSAEAGARLGGA---DIAPLSAYAT 128 Query: 216 NLGIIFQ 222 LG+ F+ Sbjct: 129 ALGLAFR 135 >gi|327537714|gb|EGF24422.1| Trans-hexaprenyltranstransferase [Rhodopirellula baltica WH47] Length = 326 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 22/200 (11%) Query: 48 LGGKKIRSFLVTECASLFNV-----NHLTA---------LRVGAAIECIHCYSLIHDDLP 93 LGGK++R L+ + + N LT + + +E +H +LIHDD+ Sbjct: 32 LGGKRLRPALLLLSGAAMHADRTSKNPLTTEELATTEDHIVMATVVEMVHTATLIHDDV- 90 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +D RR PT++ ++++ T+I+ G+ L +F + ++ + L + Q + Sbjct: 91 -LDKAATRRHVPTINARWNDDTSILLGDYLFAQSFYLAATLPSTLACRLVGQAAQKVCEG 149 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 L+ +LG LDI DE I + KT L +C+ GA ++ +++ E F Sbjct: 150 -ELRQVLGRDWLDI-----DEETYLDIIRGKTAELTRVSCQIGADLSGGDESQVEAFARF 203 Query: 214 GENLGIIFQLADDLLDCEED 233 G +LGI FQ+ADD LD D Sbjct: 204 GNDLGIAFQIADDFLDLWGD 223 >gi|307564820|ref|ZP_07627348.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A] gi|307346542|gb|EFN91851.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A] Length = 326 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 10/200 (5%) Query: 35 HNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 H D LL+ + + + GGK++R L+ A F T +E +H SLIHDD+ Sbjct: 28 HEDGLLTQVLHHIKQRGGKRMRPILILLIAKSFGKVSPTTQHAAVGLELLHTASLIHDDV 87 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D RRG+ +V+ Y+ A++ G+ +L+ A + + + ++L +L+ Sbjct: 88 --VDESNERRGQASVNASYNNKVAVLVGDYVLSTALQQVGYTNSNSIVKYLAELGQTLSD 145 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 LQ + +I+ E I E I KT L GA A S+ + R Sbjct: 146 GEILQ------LSNIKREEITEAAYLEIIARKTAILFEICAAIGAESAGVSEEDVALARA 199 Query: 213 FGENLGIIFQLADDLLDCEE 232 FG+N+G+IFQ+ DD+ D E Sbjct: 200 FGKNIGMIFQIRDDIFDYFE 219 >gi|227821037|ref|YP_002825007.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234] gi|227340036|gb|ACP24254.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234] Length = 338 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L AS+F +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMLTLAAASMFGYEGDAHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A AS+ ++ L+ +G NLG+ FQL DD+L Sbjct: 175 DDYL------QVIRAKTAALFAAAAEVGPIVASASRADRNALKSYGMNLGLAFQLVDDVL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|40062934|gb|AAR37805.1| polyprenyl synthetase [uncultured marine bacterium 442] Length = 292 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 13/200 (6%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSM 95 L A+ YA+ GG ++R L A L N N L AA IE +HC SL+HDDLP Sbjct: 28 LAKALDYAVFPGGARVRPRLCLAVA-LANGNSEPRLASAAAAAIELLHCASLVHDDLPCF 86 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNI 154 D+ RRGKP++H + + A+++G+ L+ AF+ ++ + + +R +Q+ + + Sbjct: 87 DDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVRMAQVTAIVAAGV 146 Query: 155 -GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G G+ GQ + + ++ + KTGAL A +GA A E R Sbjct: 147 GGPMGICAGQAWECE----PRVELEHYHQAKTGALFVAATCAGAAAAGVP---SEPWREL 199 Query: 214 GENLGIIFQLADDLLDCEED 233 G ++G +Q+ADD+ D D Sbjct: 200 GNSIGEAYQVADDIQDAIAD 219 >gi|228926644|ref|ZP_04089713.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228945213|ref|ZP_04107569.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229090575|ref|ZP_04221810.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-42] gi|229121156|ref|ZP_04250393.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus 95/8201] gi|229138307|ref|ZP_04266902.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-ST26] gi|229183808|ref|ZP_04311025.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BGSC 6E1] gi|228599657|gb|EEK57260.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BGSC 6E1] gi|228645199|gb|EEL01436.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BDRD-ST26] gi|228662275|gb|EEL17878.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus 95/8201] gi|228692778|gb|EEL46502.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-42] gi|228814448|gb|EEM60713.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228833020|gb|EEM78588.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 305 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 28 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 84 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLD 166 + ++ + A+ G+ L + E I+ NI + +L+H I + G++ Sbjct: 85 NAKWGDRIAMYTGDYLFAKSLECIT--------NIEIPEAHQALSHTI--LEVCKGEIEQ 134 Query: 167 IQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 135 IKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQI 194 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 195 IDDILDFVSTEEKLGK 210 >gi|332994564|gb|AEF04619.1| Geranylgeranyl pyrophosphate synthase [Alteromonas sp. SN2] Length = 324 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLTVLSARAMGIENADHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ S K +R +LS N +G + Q+++ Sbjct: 101 AVFGNQASVLVGDFLYTRSFQMMVSLK-----RMRVMDILSEATNQIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + F + KT L A + A++ +N + ++ +G++LG FQLADD+L Sbjct: 155 DASTTEARYFDVIYGKTARLFEAATQLAAVLTDQPENVEHAMQEYGKHLGTAFQLADDIL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYMAD 219 >gi|329769096|ref|ZP_08260517.1| hypothetical protein HMPREF0433_00281 [Gemella sanguinis M325] gi|328839442|gb|EGF89019.1| hypothetical protein HMPREF0433_00281 [Gemella sanguinis M325] Length = 315 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 16/224 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASL--F 65 L++ + + +L D+ + T S +++L I+ Y GGK++R L+ C+ L F Sbjct: 2 LKQYDELVQEVLKDIFVITKSE-----DEKLNQVIKKYFSAGGKRVRVLLLLICSKLGDF 56 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 N N +R+ + +E IH SLIHDD+ +D RRG T++ ++ + A++ G+ L + Sbjct: 57 NNNKKNIIRMASIVEIIHTASLIHDDI--IDKAETRRGNITLNKEFGDEFALLVGDYLFS 114 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 +S + +L I S L +L + + + ++ +D + K KT Sbjct: 115 IVLREVSEFENEL---IHSYLATTLKELCIGELIQEDGLYNLNTRRLDYLRKI---KRKT 168 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ FA SG+I++ A + + + FG LG+ +Q+ DD LD Sbjct: 169 AILIAFATVSGSIISGAKKEDVDSSYRFGYYLGMSYQIIDDYLD 212 >gi|126642763|ref|YP_001085747.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978] gi|126388647|gb|ABO13145.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978] Length = 325 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 100/192 (52%), Gaps = 22/192 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A +++++ A R+ A IE +H +L+HDD+ +D +RRG+PT Sbjct: 46 GGKRMRPIMCLLAARACDLDNMQNAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + ++ TA++ G+ L+ AF+++ + T LKD + G + G++L Sbjct: 104 NATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGEVL 152 Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 +Q + +ET + +I KT L A E AI+A + +E LR F + G F Sbjct: 153 QLQSQHQPDTTEETYLKIIHG-KTSRLFELATEGAAILA-GQEAYREPLRLFAGHFGNAF 210 Query: 222 QLADDLLDCEED 233 Q+ DD+LD D Sbjct: 211 QIIDDILDYTSD 222 >gi|11499146|ref|NP_070380.1| octaprenyl-diphosphate synthase (ispB) [Archaeoglobus fulgidus DSM 4304] gi|2649009|gb|AAB89695.1| octaprenyl-diphosphate synthase (ispB) [Archaeoglobus fulgidus DSM 4304] Length = 292 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 15/195 (7%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++ + YA+ GGK+ R +V A L ++ + + ++E IH SL+HDD+ +D Sbjct: 27 KIKKGLAYAITAGGKRSRPVIVLLSAKLCGGDYADVMNLALSVELIHTASLVHDDV--ID 84 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 RR + +H +YD AI+ G+ L++ + E+ S ++ IR N+G+ Sbjct: 85 KAEKRRKREALHKKYDISLAIVLGDWLISKSVELTSKYGEEI---IRD------FSNVGM 135 Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M G++LDI E E F + KT AL ++ +S + + ++L +G Sbjct: 136 M-MSEGEVLDIYSIKENFTEKDYFECIEKKTAALFAYSAKSACKIVCEDRIAADKLFDYG 194 Query: 215 ENLGIIFQLADDLLD 229 NLGI +Q+ DDLL+ Sbjct: 195 LNLGIAYQIVDDLLE 209 >gi|182436757|ref|YP_001824476.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777352|ref|ZP_08236617.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus XylebKG-1] gi|178465273|dbj|BAG19793.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657685|gb|EGE42531.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus XylebKG-1] Length = 336 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV + + + + +E H +L HDD+ MD +RRG P+ + Sbjct: 53 GGKRFRPLLVMLASQFGDPDAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVPSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++ A++ G+ L A I++ + +R Q + ++ GQ+L Sbjct: 111 TRWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ + GA+M+ A + + L +GE LGI Sbjct: 161 GPRDGRDPVDHYLD------VLSGKTGSLVAVSGRFGAMMSGADERTVDVLTQYGERLGI 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDIASD 228 >gi|49473966|ref|YP_032008.1| octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse] gi|49239469|emb|CAF25820.1| Octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse] Length = 356 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F+ + +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 75 GGKRLRPMITLASAHMFDYQNDGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTAR 132 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +I+ G+ LL AF+++ + I + +L+ I +G + Q+ ++ Sbjct: 133 MIWGNQASILVGDFLLGQAFKLMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSAVK 186 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + I KT AL A E G I+A E+ LR +G LG+ FQL DD+L Sbjct: 187 NIETSTSDYLKIINAKTAALFSAAAEVGPIIAGYKYKERFALREYGTLLGLAFQLIDDVL 246 Query: 229 D 229 D Sbjct: 247 D 247 >gi|114566500|ref|YP_753654.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337435|gb|ABI68283.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 313 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK +R L+ AS + + L +G A+E IH SL+HDD+ +D RRG+ +++ Sbjct: 19 SGKMLRPRLLYLAASPYPHDPLMVRDMGVAVELIHLASLVHDDV--IDQALTRRGQESIN 76 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 +Y+ T+++ G+ L AF +I+ P Q+ D I + L M G++ + Sbjct: 77 SRYNNKTSVLTGDLLFATAFNLINQHPFPQVMDQITRTIQL----------MCQGEIKQL 126 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 F + E + + KT L +C GA ++ + L +G LG +Q+ Sbjct: 127 SLAFNLDVSEEEYYEKSYSKTACLFACSCRVGAWISSMPEKYASLLEEYGLYLGYAYQII 186 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 187 DDILDLVAD 195 >gi|161506132|ref|YP_001573244.1| hypothetical protein SARI_04320 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867479|gb|ABX24102.1| hypothetical protein SARI_04320 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 498 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 10/198 (5%) Query: 38 RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ + Sbjct: 205 QLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--V 262 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D +RRGK T + + +++ G+ + T AF++++S + ++ ++S N+ Sbjct: 263 DESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVI 317 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 +G + Q++++ D I E + KT L A + I+A + +++ L+ +G Sbjct: 318 AEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGR 376 Query: 216 NLGIIFQLADDLLDCEED 233 LG FQL DDLLD D Sbjct: 377 YLGTAFQLIDDLLDYSAD 394 >gi|311277840|ref|YP_003940071.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] gi|308747035|gb|ADO46787.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] Length = 323 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKILEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + ++A S +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQCSGLLAGCSDAQEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|319944647|ref|ZP_08018914.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599] gi|319742086|gb|EFV94506.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599] Length = 329 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDNGYIR 101 GGK++R L+T A R + A +E IH +L+HDD+ +D +R Sbjct: 43 GGKRLRPVLLTLFARALGYGQTEQQRAQGHHWLMAAVVEFIHTATLLHDDI--VDESTLR 100 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG PT + Q+ +++ G+ L + +F+++ + + L+ N+ +G + Sbjct: 101 RGAPTANAQFGNAASVLVGDFLYSRSFQMMVE-----VEQLHILKTLADATNVIAEGEVL 155 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 Q+L+ D +DE + + KT L + GA++A A+ ++ +G +LG F Sbjct: 156 -QLLNCNDPDVDEAAYLQVIRFKTAKLFEASARIGAVLAGATPELEDAAAAYGRHLGTAF 214 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 215 QIIDDVLD 222 >gi|73662585|ref|YP_301366.1| heptaprenyl diphosphate syntase component II [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495100|dbj|BAE18421.1| putative heptaprenyl diphosphate syntase component II [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 317 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%) Query: 36 NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 +D++L A + L GGK++R V + + RV +E IH +L+HDD+ Sbjct: 24 HDKVLEAASHHLFSSGGKRVRPAFVILSSQFGKEMNEDVYRVAVTLELIHMATLVHDDV- 82 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +D RRG T+ ++D+ TAI+ GN LL E IS+ + + S+ ++ + Sbjct: 83 -IDKSDKRRGSLTISKKWDQNTAILTGNFLLARGLEHISNIEANRVHAVISRAIVEVCM- 140 Query: 154 IGLQGMLGGQMLDIQDEFI-DETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERL 210 G++ QD+F +T ++++ KT L+ + E GAI + A L Sbjct: 141 --------GELYQFQDQFNGHQTITNYLRRINRKTALLIQLSTEVGAITSGADAKTVHNL 192 Query: 211 RCFGENLGIIFQLADDLLD 229 + G +G+ FQ+ DD+LD Sbjct: 193 KMIGHYIGMSFQIVDDILD 211 >gi|240017367|ref|ZP_04723907.1| IspB [Neisseria gonorrhoeae FA6140] Length = 324 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIRVIQYKTAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|229102217|ref|ZP_04232926.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-28] gi|228681118|gb|EEL35286.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-28] Length = 320 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E +++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECVTNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|169831509|ref|YP_001717491.1| trans-hexaprenyltranstransferase [Candidatus Desulforudis audaxviator MP104C] gi|169638353|gb|ACA59859.1| Trans-hexaprenyltranstransferase [Candidatus Desulforudis audaxviator MP104C] Length = 318 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 13/221 (5%) Query: 16 IDTILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA 72 +D + DDL +++ + + N++LL+ L GGK++R L A +N + Sbjct: 5 LDVVRDDLDIVERELYAVLKSNNQLLTESSSHLFRAGGKRLRPALALLSAKFYNYDLQKV 64 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L + A+E +H +L+HDD+ +D +RRG PTV ++ ++ G+ LL A ++S Sbjct: 65 LPLAMALELVHLATLVHDDV--VDGAELRRGIPTVKARWGNKVSVHTGDYLLAKAMILVS 122 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 ++ + + + + + +Q G D++D ++ K KT L+ A Sbjct: 123 VYRSPVIIGVLAHSCVKMCEGEIIQ-FAGLNQCDLRD-YLRRI------KYKTALLIQAA 174 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 C+ GA+ A + + L FG LG+ FQ+ DD+LD D Sbjct: 175 CQLGAVATGAPRELYKPLGRFGHCLGMAFQITDDILDMVAD 215 >gi|90408282|ref|ZP_01216447.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3] gi|90310583|gb|EAS38703.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3] Length = 325 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A NV+ ++ A IE +H +L+HDD+ +D +RRGK T + Sbjct: 45 GGKRIRPLITILAAKALNVHSEKITKLAAIIEFVHTATLLHDDV--VDESDLRRGKKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++S + N++ +LS NI +G + Q+++ Sbjct: 103 ALFGNAASVLVGDFLYTRSFQMMSELQ-----NLKVMDVLSRATNIIAEGEV-LQLMNCN 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E I KT L A + ++A + + L +G+ LG FQL DD++ Sbjct: 157 DANISEKLYMDIIYYKTAKLFEAATQLVGVLAEQTPEIELALLNYGKYLGTAFQLTDDVM 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|59802000|ref|YP_208712.1| IspB [Neisseria gonorrhoeae FA 1090] gi|194099557|ref|YP_002002687.1| IspB [Neisseria gonorrhoeae NCCP11945] gi|239999762|ref|ZP_04719686.1| IspB [Neisseria gonorrhoeae 35/02] gi|240014919|ref|ZP_04721832.1| IspB [Neisseria gonorrhoeae DGI18] gi|240081510|ref|ZP_04726053.1| IspB [Neisseria gonorrhoeae FA19] gi|240113789|ref|ZP_04728279.1| IspB [Neisseria gonorrhoeae MS11] gi|240116523|ref|ZP_04730585.1| IspB [Neisseria gonorrhoeae PID18] gi|240118747|ref|ZP_04732809.1| IspB [Neisseria gonorrhoeae PID1] gi|240121989|ref|ZP_04734951.1| IspB [Neisseria gonorrhoeae PID24-1] gi|240124286|ref|ZP_04737242.1| IspB [Neisseria gonorrhoeae PID332] gi|240126497|ref|ZP_04739383.1| IspB [Neisseria gonorrhoeae SK-92-679] gi|240128960|ref|ZP_04741621.1| IspB [Neisseria gonorrhoeae SK-93-1035] gi|254494548|ref|ZP_05107719.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291] gi|260439720|ref|ZP_05793536.1| IspB [Neisseria gonorrhoeae DGI2] gi|268595575|ref|ZP_06129742.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02] gi|268597610|ref|ZP_06131777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19] gi|268599861|ref|ZP_06134028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11] gi|268602196|ref|ZP_06136363.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18] gi|268604462|ref|ZP_06138629.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1] gi|268682915|ref|ZP_06149777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332] gi|268685081|ref|ZP_06151943.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679] gi|268687344|ref|ZP_06154206.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035] gi|291042968|ref|ZP_06568706.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2] gi|59718895|gb|AAW90300.1| putative octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA 1090] gi|193934847|gb|ACF30671.1| IspB [Neisseria gonorrhoeae NCCP11945] gi|226513588|gb|EEH62933.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291] gi|268548964|gb|EEZ44382.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02] gi|268551398|gb|EEZ46417.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19] gi|268583992|gb|EEZ48668.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11] gi|268586327|gb|EEZ51003.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18] gi|268588593|gb|EEZ53269.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1] gi|268623199|gb|EEZ55599.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332] gi|268625365|gb|EEZ57765.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679] gi|268627628|gb|EEZ60028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035] gi|291013107|gb|EFE05076.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2] gi|317165053|gb|ADV08594.1| IspB [Neisseria gonorrhoeae TCDC-NG08107] Length = 324 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIRVIQYKTAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|302555532|ref|ZP_07307874.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736] gi|302473150|gb|EFL36243.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736] Length = 380 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + T + A+E +H +SL+HDDL MD RR + TV Sbjct: 89 GGKAVRPALAVLSAEVMSAAPETGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 146 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T +L + ++ GQ DI Sbjct: 147 KVHGPAQAILVGDALFALANEMLLELGTVEAGRATRRL------TTATRALIDGQAQDIS 200 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 201 YEHRDRVTVEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLERYGYHLGLAFQAVD 260 Query: 226 DLL 228 DLL Sbjct: 261 DLL 263 >gi|121704736|ref|XP_001270631.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus clavatus NRRL 1] gi|119398777|gb|EAW09205.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus clavatus NRRL 1] Length = 451 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 21/169 (12%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T R+ E IH SL+HDD+ +DN RR + ++Q+ A++AG+ LL A Sbjct: 190 TQRRLAEITELIHTASLLHDDV--IDNAVTRRSSNSANLQFGNKMAVLAGDFLLGRASVA 247 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE----FIDETQVFMIQK 182 ++ +L+D ++L+ ++ N ++ G+ + ++ DE F DET + +QK Sbjct: 248 LA----RLRDPEVTELLATVIAN-----LVEGEFMQLKNTAADEKNPVFTDETISYYLQK 298 Query: 183 --MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KT +L+ +C + A++ ++ + +G NLG+ FQL DDLLD Sbjct: 299 TYLKTASLISKSCRAAALLGGSTPEVVDAAYAYGRNLGLAFQLVDDLLD 347 >gi|18645048|gb|AAL76349.1| geranyltranstransferase [uncultured marine proteobacterium] Length = 313 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 13/200 (6%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSM 95 L A+ YA+ GG ++R L A L N N L AA IE +HC SL+HDDLP Sbjct: 49 LAKALDYAVFPGGARVRPRLCLAVA-LANGNSEPRLASAAAAAIELLHCASLVHDDLPCF 107 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNI 154 D+ RRGKP++H + + A+++G+ L+ AF+ ++ + + +R +Q+ + + Sbjct: 108 DDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVRMAQVTAIVAAGV 167 Query: 155 -GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 G G+ GQ + + ++ + KTGAL A +GA A E R Sbjct: 168 GGPMGICAGQAWECE----PRVELEHYHQAKTGALFVAATCAGAAAAGVP---SEPWREL 220 Query: 214 GENLGIIFQLADDLLDCEED 233 G ++G +Q+ADD+ D D Sbjct: 221 GNSIGEAYQVADDIQDAIAD 240 >gi|328884333|emb|CCA57572.1| Octaprenyl-diphosphate synthase or Dimethylallyltransferase or Geranyltranstransferase (farnesyldiphosphate synthase) or Geranylgeranyl pyrophosphate synthetase [Streptomyces venezuelae ATCC 10712] Length = 336 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 9/187 (4%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK+ R LV A + + +E H +L HDD+ MD +RRG + Sbjct: 51 LAGGKRFRPLLVMLAAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVDS 108 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++ A++ G+ L A ++ + I+S+ L L+ + D Sbjct: 109 ANTRWGNSIAVLTGDFLFARASHTLADLGPEAV-RIQSEAFERLVTGQILETAGPQEGRD 167 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D ++D + KTG+L+ +C GA+MA A ++ + L +GE LG+ FQLADD Sbjct: 168 PVDHYLD------VLGGKTGSLVAVSCRFGAMMAGADESVVDILTQYGERLGVAFQLADD 221 Query: 227 LLDCEED 233 +LD D Sbjct: 222 VLDIASD 228 >gi|300088362|ref|YP_003758884.1| polyprenyl synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528095|gb|ADJ26563.1| Polyprenyl synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 324 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 14/190 (7%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 +R+ L GGK +R L + + L + A E +H +L+HDD ++D+ RR Sbjct: 40 LRHILTGGKVLRPALTFLAGRCIDESTDRILNMATANELLHISTLVHDD--AIDHAATRR 97 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G TV+ + AI+ G+ L A E ++ DN+R+ M S T LQ + G Sbjct: 98 GHQTVNNVWGLEKAILLGDFLFARAGEYAAA-----TDNLRTVKMFSNT----LQTIAVG 148 Query: 163 QMLDIQDEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ +D F F KT +L+ + ESGA++ ++ + + L FG NLG+ Sbjct: 149 ELRQAKDVFSPAQSREGYFKRIAGKTASLLKMSTESGAVLGSGTEEQIQALADFGWNLGM 208 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 209 AFQIVDDILD 218 >gi|290955843|ref|YP_003487025.1| polyprenyl synthatase [Streptomyces scabiei 87.22] gi|260645369|emb|CBG68455.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22] Length = 350 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + A+E +H +SL+HDDL MD RR + TV Sbjct: 59 GGKAVRPALAVMSAEVTGAAPEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L+ A EI+ T + R+ ++ + ++ GQ DI Sbjct: 117 KVHGPAQAILVGDALMVLANEILLELGT--VEAARATRRVT----TATRALIDGQAQDIS 170 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ AC GA++ A + + L +G +LG+ FQ D Sbjct: 171 YEHRERVTVEECLEMEGNKTGALLACACSIGAVLGGADDHTADTLEKYGYHLGLAFQAVD 230 Query: 226 DLL 228 DLL Sbjct: 231 DLL 233 >gi|126173210|ref|YP_001049359.1| polyprenyl synthetase [Shewanella baltica OS155] gi|152999569|ref|YP_001365250.1| polyprenyl synthetase [Shewanella baltica OS185] gi|160874188|ref|YP_001553504.1| polyprenyl synthetase [Shewanella baltica OS195] gi|304410433|ref|ZP_07392051.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|307304525|ref|ZP_07584275.1| Polyprenyl synthetase [Shewanella baltica BA175] gi|125996415|gb|ABN60490.1| Trans-hexaprenyltranstransferase [Shewanella baltica OS155] gi|151364187|gb|ABS07187.1| Polyprenyl synthetase [Shewanella baltica OS185] gi|160859710|gb|ABX48244.1| Polyprenyl synthetase [Shewanella baltica OS195] gi|304350917|gb|EFM15317.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|306911927|gb|EFN42351.1| Polyprenyl synthetase [Shewanella baltica BA175] gi|315266420|gb|ADT93273.1| Polyprenyl synthetase [Shewanella baltica OS678] Length = 331 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPLLSVLAARAVSYEGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L D+++ +L+ T N+ +G + Q+++ Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSMKVLRVLADTTNVLAEGEVL-QLMNCN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A A+ ++ L +G+ LG FQL DDLL Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAGVLAGATPEQETALGNYGKYLGTAFQLTDDLL 222 Query: 229 DCEED 233 D D Sbjct: 223 DYTAD 227 >gi|124494424|gb|ABN13312.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] Length = 348 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+IR V +++N + V +E IH SL+HDD+ +D+ +RRGKPT Sbjct: 71 GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 126 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++D A+ G+ +L + E+++ I SQ ++ + G++ Sbjct: 127 IKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQ 177 Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+ ++ E + ++ + K KT L+ +C+ GAI + A + + L FG +G+ +Q+ Sbjct: 178 IKGKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 237 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE+L K Sbjct: 238 IDDILDFTSTEEELGK 253 >gi|303248764|ref|ZP_07335016.1| Trans-hexaprenyltranstransferase [Desulfovibrio fructosovorans JJ] gi|302489851|gb|EFL49780.1| Trans-hexaprenyltranstransferase [Desulfovibrio fructosovorans JJ] Length = 322 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 15/191 (7%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 +R+ LL GGK++R L A + ++E +H +L+HDD+ +D +R Sbjct: 34 VRHVLLAGGKRLRPLLAILVARALGHQEDDVYPLACSLEFLHSATLLHDDI--VDGATLR 91 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG+P+ H ++ I+AG+ LL A ++ I S+ +L Sbjct: 92 RGRPSAHTRFGATHTILAGDVLLALANRTVAEYDDPELTRILSEALLQTA---------T 142 Query: 162 GQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 G++L+I +D + I KT L+ AC GA++A N E + G N G Sbjct: 143 GEILEIAHLRDTDLPLDTYLSIITGKTAHLLQAACHCGAVLAGVDANLCEAAKTLGVNCG 202 Query: 219 IIFQLADDLLD 229 I FQL DD LD Sbjct: 203 IAFQLVDDALD 213 >gi|163867858|ref|YP_001609062.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476] gi|161017509|emb|CAK01067.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476] Length = 338 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMITLASAHMFGYQSDGHIKLATAVEFMHTATLLHDDV--IDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +I+ G+ LL AF+++ + I + +L+ I +G + Q+ + Sbjct: 115 MIWGNQASILVGDFLLGQAFKMMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSAAK 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + I KT AL A E G I+A E+ LR +G +LG+ FQL DD L Sbjct: 169 NIKTSSSDYLKIINAKTAALFSAAAEVGPIVAGYGHKERSALREYGTSLGLAFQLIDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|83590100|ref|YP_430109.1| trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC 39073] gi|83573014|gb|ABC19566.1| Trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC 39073] Length = 322 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R A L + A+E IH +L+HDD+ +D IRRG+PTV Sbjct: 43 GGKRLRPAFAILAARCCGAPLERILPLAVALEMIHMATLVHDDV--IDASPIRRGRPTVW 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ + ++ G+ L + ++++ ++ + + + + +Q M LDI Sbjct: 101 ARWGQELSLHTGDYLFARSLILVATYDDPRIPSVLASVSVKMVQG-EIQQMAAAFDLDIT 159 Query: 169 -DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +++D KT L+ +CE GAI A A LR +G NLG+ FQ+ DD+ Sbjct: 160 LRDYLDRIY------RKTALLIAASCELGAIAAGADTATIRHLRYYGRNLGLAFQITDDV 213 Query: 228 LDCEED 233 LD D Sbjct: 214 LDMVAD 219 >gi|188996355|ref|YP_001930606.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931422|gb|ACD66052.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 317 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R +LV + + + N N + AA+E +H SL+HDD+ +D +RRGKPT Sbjct: 35 GGKRVRPYLVLKFSKIMKNKNEEKDYILAAALEYLHTASLLHDDV--VDGSQLRRGKPTA 92 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166 + + T ++ G+ L A + S + NI +S T ++ M GQ+L+ Sbjct: 93 NRIFGNDTTVLTGDYLYANALYLFS-----IHGNIDMIKNVSQT----VKKMAEGQLLEL 143 Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 I D I + + I + KT AL C G + ++ K++ +G N+G+ FQ+ Sbjct: 144 KKIADFDITLQEYYSILEGKTAALFGSCCYVGTALGTDNETLKQKAFEYGLNIGMAFQIV 203 Query: 225 DDLLD 229 DDLLD Sbjct: 204 DDLLD 208 >gi|15676243|ref|NP_273375.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58] gi|161870743|ref|YP_001599916.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442] gi|218768897|ref|YP_002343409.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491] gi|7225547|gb|AAF40771.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58] gi|121052905|emb|CAM09257.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491] gi|161596296|gb|ABX73956.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442] gi|254670157|emb|CBA05202.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha153] gi|316984329|gb|EFV63303.1| polyprenyl synthetase family protein [Neisseria meningitidis H44/76] gi|319411198|emb|CBY91603.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase; OPP synthetase) [Neisseria meningitidis WUE 2594] gi|325128912|gb|EGC51766.1| octaprenyl-diphosphate synthase [Neisseria meningitidis N1568] gi|325140975|gb|EGC63481.1| octaprenyl-diphosphate synthase [Neisseria meningitidis CU385] gi|325198983|gb|ADY94439.1| octaprenyl-diphosphate synthase [Neisseria meningitidis G2136] gi|325199520|gb|ADY94975.1| octaprenyl-diphosphate synthase [Neisseria meningitidis H44/76] Length = 324 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS + L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|148265763|ref|YP_001232469.1| polyprenyl synthetase [Geobacter uraniireducens Rf4] gi|146399263|gb|ABQ27896.1| Polyprenyl synthetase [Geobacter uraniireducens Rf4] Length = 322 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L+ A L + + + + IE IH +L+HDD+ +DN +RRG + + Sbjct: 41 GGKRIRPALLLLSAKLCGYHGDRHVPLASVIEFIHTATLLHDDV--VDNANLRRGLASAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F ++ + ++ +LS I +G + Q++ Sbjct: 99 TLWGNEASVLVGDFLFSKSFSLMVADG-----DLNVLKVLSGATTIIAEGEVL-QLVCTS 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + K KT L+ AC+SGAI+ AS + L+ FG LGI FQL DD L Sbjct: 153 DLDVTTERYIEVVKSKTAILLSAACQSGAILGKASSEREVALQNFGMELGIAFQLVDDTL 212 Query: 229 D 229 D Sbjct: 213 D 213 >gi|221633181|ref|YP_002522406.1| isoprenyl synthetase [Thermomicrobium roseum DSM 5159] gi|221156897|gb|ACM06024.1| isoprenyl synthetase [Thermomicrobium roseum DSM 5159] Length = 344 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 9/190 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + GK+ R L T AS + A+ + AAIE +H ++LIHDD+ D +RR +PT+ Sbjct: 53 VSGKRFRPALCTAIASAVCGDAARAVGIAAAIELLHNFTLIHDDI--QDRSRLRRHRPTI 110 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + AI AG+ L + L+ + ++L+ L ++ GQ+LD+ Sbjct: 111 WALWGDAQAINAGDALFVLSQIAALEAAQALEPSRGAELVRRFNETALL--IVEGQVLDL 168 Query: 168 QDEFIDETQV----FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 E E V MI++ KT AL+ ++ +GA++A A RL FG LG+ FQ+ Sbjct: 169 SFEQRPEVSVNEYLTMIER-KTAALIAYSAWAGALVAGAPAEVAARLERFGRALGLGFQI 227 Query: 224 ADDLLDCEED 233 DD L D Sbjct: 228 RDDYLGVWGD 237 >gi|82395324|gb|ABB72030.1| decaprenyl diphosphate synthase [Sinorhizobium meliloti] Length = 338 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L AS+F +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMLTLAAASMFGYEGDGHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 115 TFWGNQASVLVGDFLLGQAFRMMVDVGSIDALDVLSTAASVIAEGEVLQLSVAKNMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A S+ ++ L+ +G NLG+ FQL DD+L Sbjct: 175 DDYL------RVNRAKTAALFAAASEVGPIVAGGSKADRNALKSYGTNLGLAFQLVDDVL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|148654702|ref|YP_001274907.1| polyprenyl synthetase [Roseiflexus sp. RS-1] gi|148566812|gb|ABQ88957.1| Polyprenyl synthetase [Roseiflexus sp. RS-1] Length = 338 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 22/168 (13%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA---- 127 AL + AAI+ IH +SLIHDD+ D RRG+PTV + I G+G+ T A Sbjct: 73 ALPLAAAIQLIHDFSLIHDDI--QDQSDTRRGRPTVWKLWGLAQGINTGDGMFTVAHLSL 130 Query: 128 --FEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 + S P + D +R + +L++ GQ LD+ E IDE + Sbjct: 131 HRLALTSLPAATILDVLRRFDETILTICE---------GQFLDLSYEGNLEIDEAAYLAM 181 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + KT AL+ + E GA++ A + + L FG LG+ FQ+ DD+L Sbjct: 182 IERKTAALIAASAELGALVGGADEETIQALSDFGRALGLAFQIEDDVL 229 >gi|294789130|ref|ZP_06754369.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453] gi|294482871|gb|EFG30559.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453] Length = 324 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPILTILSGKCLGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + ++ +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----LKILEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+A A+ ++ L+ FG +G FQ+ DD+L Sbjct: 157 NIDITEAQYLQVIQYKTAKLFEAAAQVGAILAGATHEQETALKNFGMYMGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|329939715|ref|ZP_08289016.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus M045] gi|329301285|gb|EGG45180.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus M045] Length = 384 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 17/223 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70 E + +D++ + + H QH D +A GK IR LV A+ + Sbjct: 65 ELRRAVDSLPESMRRIGLYHFGWQHADGSPAAGN----AGKAIRPALVLTAAATLGGHRQ 120 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A+R AA+E +H ++L+HDD+ MD RR +PT + + AI+AG+ L A + Sbjct: 121 AAVRAAAAVELVHNFTLLHDDV--MDRDTTRRHRPTAWTVFGDSDAILAGDALQALAHRL 178 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKT 185 ++ +D + + + + GQ D + E + +V + + KT Sbjct: 179 LA------EDPHPASAAAAARLASCVVELCAGQHADTALEERRPEDVTLEEVLAMAEAKT 232 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GAL+ AC GA+ A A E E L FG G+ FQL DD++ Sbjct: 233 GALLGCACAMGALYAGAPHGEVEALDAFGRQAGLAFQLIDDVI 275 >gi|325203440|gb|ADY98893.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240355] Length = 324 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS + L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|190890586|ref|YP_001977128.1| octaprenyl-diphosphate synthase [Rhizobium etli CIAT 652] gi|190695865|gb|ACE89950.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CIAT 652] Length = 346 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L ASLF+ +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 65 GGKRLRPMLTLAAASLFDYRGENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 122 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 123 MIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTE 182 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A A ++ + L+ +G NLG+ FQL DD L Sbjct: 183 DDYL------AVIRAKTAALFAAAAEVGPIVAEAGKSGRNALKSYGMNLGLAFQLVDDAL 236 Query: 229 D 229 D Sbjct: 237 D 237 >gi|111220885|ref|YP_711679.1| geranylgeranyl pyrophosphate synthetase [Frankia alni ACN14a] gi|111148417|emb|CAJ60089.1| geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (GGPPSASE) (Geranylgeranyl diphosphate synthase) [Includes: Dimethylallyltranstransferase; Geranyltranstransferase; Farnesyltranstransferase] [Frankia alni ACN14a] Length = 338 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 89/188 (47%), Gaps = 11/188 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A L A+E +H +SL+HDDL MD RR +PT Sbjct: 53 GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+AG+ LL A +++ + + R+ L+L G+Q ++ GQ D+ Sbjct: 111 TVFGADGAILAGDALLGLATQVLL--EVEGDAARRAALIL----GAGVQDLVRGQAEDLM 164 Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V +M KTGAL+ + GA++A A + L +G LG FQL D Sbjct: 165 FESRSDVTVADTLRMEDGKTGALLACSASLGAVLAGAGDEMVDALAEYGSRLGTAFQLID 224 Query: 226 DLLDCEED 233 DLL D Sbjct: 225 DLLGIWGD 232 >gi|239943496|ref|ZP_04695433.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] gi|239989950|ref|ZP_04710614.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 11379] gi|291446967|ref|ZP_06586357.1| isoprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] gi|291349914|gb|EFE76818.1| isoprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] Length = 336 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV + + + + +E H +L HDD+ MD +RRG P+ + Sbjct: 53 GGKRFRPLLVMLASQFGDPDAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVPSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++ A++ G+ L A I++ + +R Q + ++ GQ+L Sbjct: 111 TRWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ + GA+M+ A + + L +GE LGI Sbjct: 161 GPRDGRDPVDHYLD------VLSGKTGSLVAVSGRFGAMMSGADERTVDILTQYGERLGI 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDIASD 228 >gi|157148758|ref|YP_001456077.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895] gi|157085963|gb|ABV15641.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895] Length = 498 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 218 GGKRIRPMIAVLAARAVGYQENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 275 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 276 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 329 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + ++A + +++ L+ +G LG FQL DDLL Sbjct: 330 DPDITEENYMRVIYSKTARLFEAAAQCSGLLAGCTPEQEKGLQDYGRYLGTAFQLIDDLL 389 Query: 229 DCEED 233 D D Sbjct: 390 DYSAD 394 >gi|327192818|gb|EGE59745.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CNPAF512] Length = 338 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L ASLF+ +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMLTLAAASLFDYRGENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A A ++ + L+ +G NLG+ FQL DD L Sbjct: 175 DDYLS------VIRAKTAALFAAAAEVGPIVAEAGRSGRNALKSYGMNLGLAFQLVDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|238898823|ref|YP_002924505.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466582|gb|ACQ68356.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 310 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 30 GGKRIRPMISILSARALNYKGDQHIIVAALIEFIHTATLLHDDV--VDKSDLRRGKKTAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++ + +R ++S N+ +G + Q++ Sbjct: 88 TVFGNSASVLVGDFIYTRAFQMMTDLGS-----MRILKVMSSATNVISEGEVQ-QLMYCN 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S AI+A AS ++ L+ +G LG +QL DDLL Sbjct: 142 NVNITEYDYMKVIYSKTARLFEAASQSAAILAKASPEQESALQSYGCYLGTTYQLIDDLL 201 Query: 229 D 229 D Sbjct: 202 D 202 >gi|293610928|ref|ZP_06693227.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826580|gb|EFF84946.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123244|gb|ADY82767.1| octaprenyl-diphosphate synthase [Acinetobacter calcoaceticus PHEA-2] Length = 325 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 22/192 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A ++++ A R+ A IE +H +L+HDD+ +D +RRG+PT Sbjct: 46 GGKRMRPIMCLLAARACGLDNMANAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + ++ TA++ G+ L+ AF+++ + T LKD + G + G++L Sbjct: 104 NATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGEVL 152 Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 +Q + +ET + +I KT L A E AI+A + +E LR F + G F Sbjct: 153 QLQSQHQPDTTEETYLKIIHG-KTSRLFELATEGAAILA-GQEAYREPLRLFAGHFGNAF 210 Query: 222 QLADDLLDCEED 233 Q+ DD+LD D Sbjct: 211 QIIDDILDYTSD 222 >gi|217959091|ref|YP_002337639.1| heptaprenyl diphosphate synthase component II [Bacillus cereus AH187] gi|217065071|gb|ACJ79321.1| heptaprenyl diphosphate synthase component II [Bacillus cereus AH187] Length = 320 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + S +L + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSYTILEVCK---------GEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|206970523|ref|ZP_03231475.1| heptaprenyl diphosphate synthase component II [Bacillus cereus AH1134] gi|206734159|gb|EDZ51329.1| heptaprenyl diphosphate synthase component II [Bacillus cereus AH1134] Length = 320 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ + ++ + K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYNQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|15614216|ref|NP_242519.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Bacillus halodurans C-125] gi|10174270|dbj|BAB05372.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Bacillus halodurans C-125] Length = 323 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 21/214 (9%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLI 88 +Q +H+ +++ GGK+IR V ++VN L + +E IH SL+ Sbjct: 25 VQARHDILRKASVHLLKAGGKRIRPVFVLLAGKFGTYDVNVLK--HIAVPLELIHMASLV 82 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D+ +RRGK T+ Q+D A+ G+ Y F T D Q++ Sbjct: 83 HDDV--IDDADLRRGKKTIKSQWDNRIAMYTGD----YMFAKAVQTATYFDDPNIHQIIS 136 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205 + + M G++ I+D++ + F K KT L+ +C+ GA+ A A Sbjct: 137 N-----AINEMCLGEVEQIRDQYNPNQHLRIYFRRIKRKTALLIAVSCQLGALAAKADPA 191 Query: 206 EKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 ++L FG +G+ FQ+ DD+LD EE L K Sbjct: 192 IVQKLYYFGYYVGMSFQITDDVLDFVGTEEQLGK 225 >gi|262281247|ref|ZP_06059029.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus RUH2202] gi|262257478|gb|EEY76214.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus RUH2202] Length = 325 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 22/192 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A ++++ A R+ A IE +H +L+HDD+ +D +RRG+PT Sbjct: 46 GGKRMRPIMCLLAARACGLDNMANAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + ++ TA++ G+ L+ AF+++ + T LKD + G + G++L Sbjct: 104 NATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGEVL 152 Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 +Q + +ET + +I KT L A E AI+A + +E LR F + G F Sbjct: 153 QLQSQHQPDTTEETYLKIIHG-KTSRLFELATEGAAILA-GQEAYREPLRLFAGHFGNAF 210 Query: 222 QLADDLLDCEED 233 Q+ DD+LD D Sbjct: 211 QIIDDILDYTSD 222 >gi|261391852|emb|CAX49311.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase; OPP synthetase) [Neisseria meningitidis 8013] Length = 324 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDEKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS + L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|228951990|ref|ZP_04114087.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807715|gb|EEM54237.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 305 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 28 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 84 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E I++ + + +L+H I + G++ I Sbjct: 85 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 135 Query: 168 QDEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ + ++ + K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 136 KDKYNYNQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 195 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 196 DDILDFVSTEEKLGK 210 >gi|156502468|ref|YP_001428533.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|290953802|ref|ZP_06558423.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312813|ref|ZP_06803545.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica URFT1] gi|156253071|gb|ABU61577.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 325 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A N N L A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 44 GGKRLRPLLVILFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ S DN++ Q++ T+ I +L Q+L+ Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224 ++ + E + + KT L ACE +++ Q+ + R++ +G LG FQ+ Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGLISIDKQDYTKYQGRIKNYGVYLGNAFQIT 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDVLDYVSD 223 >gi|325267223|ref|ZP_08133886.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394] gi|324981284|gb|EGC16933.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394] Length = 324 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPILTILSGKCLGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + ++ +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----LKILEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+A A ++ L+ FG +G FQ+ DD+L Sbjct: 157 NVDITEQQYLQVIQYKTAKLFEAAAQVGAILAGADDEQERALKEFGMYMGTAFQIVDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|305662643|ref|YP_003858931.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230] gi|304377212|gb|ADM27051.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230] Length = 346 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 13/223 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70 E + RI I+D+ ++ T + + + +A+ Y GGK++R +V A + + Sbjct: 20 EYASRISKIVDEFIMNTIRGIPSTLYE---AALHYLRAGGKRLRPLIVVLGARIVGGDED 76 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A+ A++E +H ++L+HDD+ +D +RRG PTVH + AI+AG+ L Y++ Sbjct: 77 IAIPGAASVEVLHTFTLVHDDI--IDKDELRRGVPTVHKIWGSDMAIVAGDLLYAYSYRC 134 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-----IQDEFIDETQVFMIQKMKT 185 + + R + + + + + GQ LD +Q+ I++ + M++K KT Sbjct: 135 LLRALERGVPVERVNKAIDILTDAAIT-VAEGQALDMLLPSMQNVSIND-YIEMVKK-KT 191 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 AL + GA +A + L+ N GI FQ+ DD+L Sbjct: 192 AALFASSIAIGATLAGGDEKLTAILKESMINAGIAFQIRDDIL 234 >gi|91978222|ref|YP_570881.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5] gi|91684678|gb|ABE40980.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5] Length = 288 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 20/193 (10%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 RL +A+R A+ G ++R L A + N GAA+E +HC SL+HDDLP Sbjct: 26 RLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPAATEAAGAALELMHCASLVHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D IRRG+P+VH + E A++ G+ L+ AF+ I+ + N +L LT +G Sbjct: 86 DGADIRRGRPSVHKAFGEPLAVLTGDALIVLAFQTIA------RVNCAPDRLLKLTQVVG 139 Query: 156 LQ-----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G++ GQ + + E + + KTGAL + A A ++ + E Sbjct: 140 GAVGVPLGIVAGQAWECESEI----NLAHYHRSKTGALF---VAATAAGAASAGADPEPW 192 Query: 211 RCFGENLGIIFQL 223 R GE +G +Q+ Sbjct: 193 RLVGEKIGEAYQV 205 >gi|46447630|ref|YP_008995.1| putative geranyltranstransferase [Candidatus Protochlamydia amoebophila UWE25] gi|46401271|emb|CAF24720.1| putative geranyltranstransferase [Candidatus Protochlamydia amoebophila UWE25] Length = 269 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A YALL GGK+ R LV A + + +E H SLI DDLP MDN Sbjct: 7 LRDACEYALLNGGKRFRPALVLMIAKALGF-QVDVSQAALCVEYFHTASLIADDLPCMDN 65 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-------MLSL 150 RR PT+H + E T+++A L+ + ++ LKD+ + +L+L Sbjct: 66 DDERRNAPTLHKIFGESTSLLATYTLIAAGYACLARNTAILKDSAHPYVNQKERLCVLAL 125 Query: 151 ---THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 T N G+ G GGQ LD+ + + + + KT L + G I + Sbjct: 126 ENATQNTGILGATGGQYLDLNPPNLSLKTLKEVIEKKTVTLFEISFVLGWIFGGGVLEKL 185 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 ++ + G+ FQ+ADDL D ++D Sbjct: 186 SLVKKCAGHFGMAFQIADDLGDMKQD 211 >gi|283852797|ref|ZP_06370060.1| Trans-hexaprenyltranstransferase [Desulfovibrio sp. FW1012B] gi|283571789|gb|EFC19786.1| Trans-hexaprenyltranstransferase [Desulfovibrio sp. FW1012B] Length = 322 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 15/191 (7%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 +R+ LL GGK++R L A F + + ++E +H +L+HDD+ +D +R Sbjct: 34 VRHVLLAGGKRLRPLLTVLVARAFGHDKDDVYPLACSLEFLHSATLLHDDI--VDGAPLR 91 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG+ + H+++ I+AG+ LL A I++ I S+ +L Sbjct: 92 RGRESAHVRFGATHTILAGDVLLALANRIVAEYDVPELTRILSEALLQTA---------T 142 Query: 162 GQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 G++L+I +D + I KT L+ AC GAI+A A + G N G Sbjct: 143 GEILEIAHLRDTDLPLETYLSIITGKTAYLLQAACHCGAILAGADARLCQAAMSLGVNCG 202 Query: 219 IIFQLADDLLD 229 I FQL DD LD Sbjct: 203 IAFQLVDDALD 213 >gi|319941776|ref|ZP_08016098.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B] gi|319804709|gb|EFW01576.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B] Length = 332 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + +GA IE +H +L+HDD+ +D +RRG+PT + Sbjct: 54 GGKRMRPALLILISRALGYKGDLCCYLGATIELLHTATLMHDDV--VDESNLRRGRPTAN 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A++ G+ L T +F+++ N+R L+ N +G + QM++ Sbjct: 112 ARWGNGAAVLVGDFLYTRSFQMMVRAG-----NLRVMQALADAANRLSEGEVV-QMVNAH 165 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DET+ F + + KT L A +A S+ ++E + + LG FQ+ADD+L Sbjct: 166 DPSVDETRYFRVIERKTACLFEAGARMAAAIAECSKEQEEAVAQYALALGNAFQIADDIL 225 Query: 229 D 229 D Sbjct: 226 D 226 >gi|240850066|ref|YP_002971459.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup] gi|240267189|gb|ACS50777.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup] Length = 358 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 77 GGKRLRPMITLASAHMFGYQSDGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTAR 134 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+++ + I + +L+ I +G + Q+ + Sbjct: 135 MIWGNQASVLVGDFLLGQAFKMMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSAAK 188 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + I KT AL A E G I+A E+ LR +G +LG+ FQL DD L Sbjct: 189 NIKTSPSDYLKIINAKTAALFSAAAEVGPIVAGYGHKERSSLREYGTSLGLAFQLIDDAL 248 Query: 229 D 229 D Sbjct: 249 D 249 >gi|319408199|emb|CBI81852.1| octaprenyl-diphosphate synthase [Bartonella schoenbuchensis R1] Length = 338 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +++ AIE +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMITLAAADMFGYQGDGHIKLATAIEFMHTATLLHDDV--VDESNLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLD 166 + + +++ G+ LL AF++I ++ S L++ N G Q+ Sbjct: 115 MIWGNKASVLVGDFLLGQAFKMIV--------DVGSMEALTILANAAAIIAEGEVMQLAA 166 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 Q+ + I KT AL A E G I+A E+ LR +G +LG+ FQL DD Sbjct: 167 AQNIETTASDYLKIINAKTAALFSAAAEVGPIIAGYGHEERLALREYGTSLGLAFQLVDD 226 Query: 227 LLD 229 LD Sbjct: 227 ALD 229 >gi|302038674|ref|YP_003798996.1| polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii] gi|300606738|emb|CBK43071.1| Polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii] Length = 334 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R V A L +G+ +E IH +L+HDD+ +D +RRG+ T Sbjct: 53 GGKRVRPLFVLLSAHLCGYAGQDHQALGSLVEFIHTATLLHDDV--VDEADLRRGRRTAS 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +I+ G+ L + A I + Q + S+ + LQ G L Sbjct: 111 KVWGNQISILVGDYLYSRAICQIVDFRNQGINEALSEACRKMAEGEVLQLYYNGNPL--- 167 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E++ I + KT L+ +C+ GAI+ A++ +E L FG+ LGI FQLADD L Sbjct: 168 ---MPESEYLRIIEHKTAGLIAASCKIGAIVGGATEELQEALFRFGQRLGIAFQLADDTL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|271966484|ref|YP_003340680.1| octaprenyl-diphosphate synthase [Streptosporangium roseum DSM 43021] gi|270509659|gb|ACZ87937.1| octaprenyl-diphosphate synthase [Streptosporangium roseum DSM 43021] Length = 322 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 27/216 (12%) Query: 29 SHMQTQHNDRLL-----------SAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76 S +Q DRLL + +R G GK +R L+ A +H +R+G Sbjct: 15 SDFTSQVTDRLLRLADGLPEPVRAPVRTLAAGPGKFVRPRLLAAGAGFGTADHDRLVRLG 74 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A +E IH SL+HDD+ +D RRG P H A++AG F ++ + Sbjct: 75 ALVELIHLASLLHDDV--IDEAETRRGAPAAHTAVGTEQAMLAG----LACFALVGTEAA 128 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFAC 193 L + + + +++ + G++LD++ F + + KT L C Sbjct: 129 DLGEGVAGAVSMAVAK------LAYGELLDVERAFDTAFPLPAYLELVQSKTAELFRLCC 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA A + E + L FG LG+ FQ+ DD LD Sbjct: 183 LLGAAEARSGHGEADALVRFGTALGVTFQILDDCLD 218 >gi|241203314|ref|YP_002974410.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857204|gb|ACS54871.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 338 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L ASLF+ +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMLTLASASLFDYRGENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A A ++ + L+ +G NLG+ FQL DD L Sbjct: 175 DDYLS------VIRAKTAALFAAAAEVGPIVAEAGRSGRNALKSYGMNLGLAFQLVDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|169632597|ref|YP_001706333.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter baumannii SDF] gi|169794921|ref|YP_001712714.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter baumannii AYE] gi|184159304|ref|YP_001847643.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii ACICU] gi|213157674|ref|YP_002320472.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057] gi|215482467|ref|YP_002324653.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294] gi|239502311|ref|ZP_04661621.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB900] gi|260557286|ref|ZP_05829502.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606] gi|301344906|ref|ZP_07225647.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB056] gi|301511077|ref|ZP_07236314.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB058] gi|301595152|ref|ZP_07240160.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB059] gi|332854208|ref|ZP_08435228.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6013150] gi|332866350|ref|ZP_08436955.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6013113] gi|332872565|ref|ZP_08440534.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6014059] gi|169147848|emb|CAM85711.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter baumannii AYE] gi|169151389|emb|CAP00114.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter baumannii] gi|183210898|gb|ACC58296.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii ACICU] gi|213056834|gb|ACJ41736.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057] gi|213986828|gb|ACJ57127.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294] gi|260409392|gb|EEX02694.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606] gi|322509215|gb|ADX04669.1| ispB [Acinetobacter baumannii 1656-2] gi|323519244|gb|ADX93625.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii TCDC-AB0715] gi|332728133|gb|EGJ59521.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6013150] gi|332734698|gb|EGJ65802.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6013113] gi|332739251|gb|EGJ70109.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii 6014059] Length = 325 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 22/192 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A ++++ A R+ A IE +H +L+HDD+ +D +RRG+PT Sbjct: 46 GGKRMRPIMCLLAARACGLDNMQNAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + ++ TA++ G+ L+ AF+++ + T LKD + G + G++L Sbjct: 104 NATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGEVL 152 Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 +Q + +ET + +I KT L A E AI+A + +E LR F + G F Sbjct: 153 QLQSQHQPDTTEETYLKIIHG-KTSRLFELATEGAAILA-GQEAYREPLRLFAGHFGNAF 210 Query: 222 QLADDLLDCEED 233 Q+ DD+LD D Sbjct: 211 QIIDDILDYTSD 222 >gi|32267223|ref|NP_861255.1| hypothetical protein HH1724 [Helicobacter hepaticus ATCC 51449] gi|32263276|gb|AAP78321.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 303 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 24/188 (12%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +RS L+ S+ ++N ALRV A IE I SL+HDD+ +D RRG P+++ Sbjct: 36 GKMLRSKLLL---SISDMNE-DALRVCALIEMIQSASLLHDDV--IDESLTRRGIPSINA 89 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L + AF +S +L ++ S ++ LS+ G++ D++ Sbjct: 90 TFGNKNAIMLGDVLYSKAFYELSCLDVRLAQSVSSAVVRLSV-----------GEIEDVK 138 Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D+ + + KT AL+ A E GAI+ ++N R +GENLGI FQ+ D Sbjct: 139 LSLSFHTDKERYIRMCADKTAALIVAAAECGAILKGLNKN---IYRIYGENLGIAFQIID 195 Query: 226 DLLDCEED 233 D+LD +D Sbjct: 196 DILDITQD 203 >gi|171184649|ref|YP_001793568.1| polyprenyl synthetase [Thermoproteus neutrophilus V24Sta] gi|170933861|gb|ACB39122.1| Polyprenyl synthetase [Thermoproteus neutrophilus V24Sta] Length = 334 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 32/207 (15%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + A+ A +E IH YSLI+DD+ +D G +RRG PTV Sbjct: 42 GGKRLRPLLTLATAEAVSGRWEPAVPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVR 99 Query: 109 IQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQML 165 + + AI+ G E ++ +PK L+ + ++ + G+ L Sbjct: 100 KAFGDNAAILIGIWYREAIEEAVLDTPKP-----------LAFAKEVAKVIKAIDEGERL 148 Query: 166 DIQDEFIDETQVFMIQ---------------KMKTGALMCFACESGAIMAHASQNEKERL 210 DI E+ + I+ +KTGAL+ A + GA+ E Sbjct: 149 DILFEYAGREDPYFIKARKAEVTLEDYIHMVSLKTGALIAAAAKWGAMSVSDDGKLAEEA 208 Query: 211 RCFGENLGIIFQLADDLLDCEEDLPKK 237 FG G+ FQ+ DD+LD D PKK Sbjct: 209 WNFGLKAGVAFQIIDDVLDIYGD-PKK 234 >gi|124265703|ref|YP_001019707.1| dimethylallyltransferase [Methylibium petroleiphilum PM1] gi|124258478|gb|ABM93472.1| Dimethylallyltransferase [Methylibium petroleiphilum PM1] Length = 330 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 8/183 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPMLVLLFAQALGFRGPERFELAATVEFIHTATLLHDDV--VDESALRRGRDTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ L + AF+++ S + +R +L+ N+ +G + Q++++ Sbjct: 109 ARFGNAASVLVGDFLYSRAFQMMVS-----VNRMRVLEVLADATNVIAEGEVL-QLMNMH 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + KT L + GA++A AS + +G LG FQL DDLL Sbjct: 163 DPDLSIDDYLRVIRFKTAKLFEASARLGAMLADASPGVETACADYGRALGTAFQLVDDLL 222 Query: 229 DCE 231 D E Sbjct: 223 DYE 225 >gi|148544308|ref|YP_001271678.1| polyprenyl synthetase [Lactobacillus reuteri DSM 20016] gi|184153686|ref|YP_001842027.1| polyprenyl synthase [Lactobacillus reuteri JCM 1112] gi|227365030|ref|ZP_03849068.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri MM2-3] gi|325681657|ref|ZP_08161177.1| polyprenyl synthetase [Lactobacillus reuteri MM4-1A] gi|148531342|gb|ABQ83341.1| Polyprenyl synthetase [Lactobacillus reuteri DSM 20016] gi|183225030|dbj|BAG25547.1| polyprenyl synthase [Lactobacillus reuteri JCM 1112] gi|227069942|gb|EEI08327.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri MM2-3] gi|324978969|gb|EGC15916.1| polyprenyl synthetase [Lactobacillus reuteri MM4-1A] Length = 326 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 28/197 (14%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK +R A N+NH TA +++ +++E +H +LIHDD+ +D+ RR Sbjct: 45 GGKYLRPAFFLLFA---NINHQTADEQEKLIKIASSLEVLHMATLIHDDI--IDDSPKRR 99 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT---QLKDNIRSQLMLSLTHNIGLQGM 159 G +V + + TA+ G+ L T F+++ T L N R+ ++ + Sbjct: 100 GAVSVQAAFGKDTAVYTGDFLFTIFFDLLVETMTGSAYLTRNART-----------MRKI 148 Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 L G++ + + F +D++ + + + KT A+ A E GA HA + G+N Sbjct: 149 LTGELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLAAEEGAYFGHADHRTINLAKRIGQN 208 Query: 217 LGIIFQLADDLLDCEED 233 +GI FQ+ DD+LD D Sbjct: 209 IGISFQILDDILDYSGD 225 >gi|307824936|ref|ZP_07655158.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96] gi|307733983|gb|EFO04838.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96] Length = 336 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + L + A IE IH +L+HDD+ +D+ +RRGK + + Sbjct: 57 GGKRLRPMLLLLAAKALGGANDNHLLMAAVIEFIHTATLLHDDV--VDDSDLRRGKESAN 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +I+ G+ L + AFE++ N+R +LS T +G + Q+L+ Sbjct: 115 AVWGNAASILVGDYLYSSAFEMMVRTG-----NMRVMEILSKTTTAIAEGEVL-QLLNCN 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + KT L A + A++A AS ++ L +G++LGI FQL DD L Sbjct: 169 NPETTEQKYLEVIARKTAILFSAATKLAAVIAGASTETEQGLSLYGQHLGIAFQLIDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|291303388|ref|YP_003514666.1| trans-hexaprenyltranstransferase [Stackebrandtia nassauensis DSM 44728] gi|290572608|gb|ADD45573.1| Trans-hexaprenyltranstransferase [Stackebrandtia nassauensis DSM 44728] Length = 322 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 32/232 (13%) Query: 8 KLQENSKRIDTILDD---LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 +L+ KR+ ++D L + ASH +L A GGK+ R L A Sbjct: 15 RLEVIEKRLQEVIDSGDAFLTEAASH--------VLKA------GGKRFRPMLSVTAAHF 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + + +E H +L HDD+ MD +RRG P+ + ++ AI++G+ L Sbjct: 61 GDPDAHGVIESSLVMELTHLATLYHDDV--MDEAAMRRGAPSANSRWSNSIAILSGDYLF 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM-IQ 181 A E+++ ++ +R Q ++ GQ+ + E +D ++ + Sbjct: 119 AVASELVAELGSE---TVREQART-------FSRLVHGQIAETVGPPEGVDPVDWYLRVL 168 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTG+L+ A GA A A + + + +GE +G+ FQL+DDLLD D Sbjct: 169 TDKTGSLIATAARLGAQFAGAPTSVVDAVAEYGETIGVAFQLSDDLLDIASD 220 >gi|295663240|ref|XP_002792173.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides brasiliensis Pb01] gi|226279348|gb|EEH34914.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides brasiliensis Pb01] Length = 533 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 89/162 (54%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++++ A++AG+ LL A ++ Sbjct: 275 RLAEITEVIHTASLLHDDV--IDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRASVALA- 331 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG---MLGGQMLDIQDEFIDETQV-FMIQK--MKTGA 187 +L+D +L+ ++ N+ ++G L LD ++ F E + + +QK +K+ + Sbjct: 332 ---RLRDPEVIELVATVIANL-IEGEFMQLRNTELDEENPFFTEEAIAYYLQKTYLKSAS 387 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + A++ H+S E +G NLG+ FQL DD+LD Sbjct: 388 LISKSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLD 429 >gi|95929474|ref|ZP_01312217.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM 684] gi|95134590|gb|EAT16246.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM 684] Length = 322 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 20/187 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV CA L + + V + +E IH +L+HDD+ +D+ +RRG + + Sbjct: 41 GGKRMRPMLVLLCARLAAYQGESHIGVASVVEFIHTATLLHDDV--VDSADLRRGAASAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS------QLMLSLTHNIGLQGMLGG 162 + +++ G+ L + +F I+ +R+ Q + T N+ +L Sbjct: 99 NVWGNEASVLVGDFLFSKSFSIM----------VRTGSLPILQALSDATTNMAEGEVL-- 146 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q++ D + E + + + KT L+ AC G I+ S +++ L+ FG LGI FQ Sbjct: 147 QLISTCDLDLSEERYMQVVRDKTAVLIAAACRCGGILGGVSAEQEQALQEFGMELGIAFQ 206 Query: 223 LADDLLD 229 DD LD Sbjct: 207 FMDDALD 213 >gi|78042835|ref|YP_360049.1| heptaprenyl diphosphate synthase component II [Carboxydothermus hydrogenoformans Z-2901] gi|77994950|gb|ABB13849.1| heptaprenyl diphosphate synthase component II [Carboxydothermus hydrogenoformans Z-2901] Length = 326 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R A L + + + A+E IH +L+HDD+ +DN +RRG PTV Sbjct: 48 GGKRLRPAFALLAAKLGDYDFEKVKPLAVALELIHMATLVHDDV--VDNSMLRRGLPTVK 105 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +I G+ + + +I S K + +++ + +T +Q + G + +I Sbjct: 106 ANWGNKMSIHIGDRIFAKSLLLIDSCKNNYVAKVLAEVSVKMTTG-EIQQLNGAK--NIS 162 Query: 169 DEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D ++I+ K KT L+ +CE G +MA+ S L+ +G +G+ FQ+ DD+ Sbjct: 163 TSIKD----YLIKIKRKTALLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQIIDDI 218 Query: 228 LDCEED 233 LD D Sbjct: 219 LDFTAD 224 >gi|189502166|ref|YP_001957883.1| hypothetical protein Aasi_0775 [Candidatus Amoebophilus asiaticus 5a2] gi|189497607|gb|ACE06154.1| hypothetical protein Aasi_0775 [Candidatus Amoebophilus asiaticus 5a2] Length = 324 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 15/184 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK++R LV AS+ + R GAA + +H SLIHDD+ +D RR K TV+ Sbjct: 43 GKQLRPQLVLIVASVLGNDITEKTRRGAALVSLLHHASLIHDDV--VDEATYRRHKETVN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 ++ A++ G+ +L + +I + + Q D + ML++T Q M G++L + Sbjct: 101 ARWGNKLAVLFGDYVLANSLQI--AIENQDYDFLP---MLTIT----TQTMSEGEILQLK 151 Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q+ E I + KT +L+ +C GA+ ASQ + E + GE +G+ FQL+D Sbjct: 152 QAQEIMASEATYLEIIQKKTASLLAASCAMGAMSVSASQEQIEIMYAIGEQIGMAFQLSD 211 Query: 226 DLLD 229 DL+D Sbjct: 212 DLID 215 >gi|299768956|ref|YP_003730982.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1] gi|298699044|gb|ADI89609.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1] Length = 325 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 22/192 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A ++++ A R+ A IE +H +L+HDD+ +D +RRG+PT Sbjct: 46 GGKRMRPIMCLLAARACGLDNMQNAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + ++ TA++ G+ L+ AF+++ + T LKD + G + G++L Sbjct: 104 NATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGEVL 152 Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 +Q + +ET + +I KT L A E AI+A + +E LR F + G F Sbjct: 153 QLQSQHQPDTTEETYLKIIHG-KTSRLFELATEGAAILA-GQEAYREPLRLFAGHFGNAF 210 Query: 222 QLADDLLDCEED 233 Q+ DD+LD D Sbjct: 211 QIIDDILDYTSD 222 >gi|229096105|ref|ZP_04227078.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-29] gi|229115061|ref|ZP_04244471.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock1-3] gi|228668201|gb|EEL23633.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock1-3] gi|228687065|gb|EEL40970.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-29] Length = 320 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E +++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECVTNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDMVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|209964973|ref|YP_002297888.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum SW] gi|209958439|gb|ACI99075.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum SW] Length = 340 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + A +E +H +L+HDD+ +D +RRG+ + + Sbjct: 59 GGKRLRPVLTLAAAQLCGYQGTRQTALAACVEFLHTATLLHDDV--VDESDLRRGQASAN 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L AF+I+ + D +R ++ + + I +L Q+ Sbjct: 117 AVFGNKASVLVGDFLFARAFQIMVEDGSL--DVLR--ILCTASAVIAEGEVL--QLTTTN 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + K KT L ACE G I+A E+ LR +G NLGI FQL DD+L Sbjct: 171 DTDTTEEAYLEVIKAKTAELFAAACELGGIVADRPAVEQAALRSYGMNLGIAFQLVDDVL 230 Query: 229 D 229 D Sbjct: 231 D 231 >gi|300783442|ref|YP_003763733.1| dimethylallyltranstransferase [Amycolatopsis mediterranei U32] gi|299792956|gb|ADJ43331.1| dimethylallyltranstransferase [Amycolatopsis mediterranei U32] Length = 339 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 87/188 (46%), Gaps = 18/188 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R LV CA A+ A+E +H +SL+HDD+ MD RR + T Sbjct: 61 GGKALRPALVLLCAEAAGGEAADAVPAAVAVELVHNFSLLHDDV--MDGDTTRRHRATAW 118 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 + A++AG+ LL+ AFE++ +P + S L+L L GQ D+ Sbjct: 119 TVFGTGPAVLAGDALLSLAFEVL-APSGAANAKVLSAATLAL---------LEGQAADLD 168 Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 Q + + + + + KT AL+ AC GA A + R FG +G+ FQ D Sbjct: 169 FEQRDDVTPGECIRMAEGKTAALLGAACTLGATSGPAGAD---RFGAFGRAVGLAFQHVD 225 Query: 226 DLLDCEED 233 DLL D Sbjct: 226 DLLGIWGD 233 >gi|49475216|ref|YP_033257.1| octaprenyl-diphosphate synthase [Bartonella henselae str. Houston-1] gi|49238021|emb|CAF27227.1| Octaprenyl-diphosphate synthase [Bartonella henselae str. Houston-1] Length = 356 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A +F + +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 75 GGKRLRPMLTLASARMFGYQNDGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTAR 132 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +I+ G+ LL AF+++ ++ S LS+ N + G+++ + Sbjct: 133 MIWGNQASILVGDFLLGQAFKMMV--------DVGSIEALSVLANAAAI-IAEGEVMQLS 183 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ET + I KT AL A E G I+A E+ LR +G LG+ FQL D Sbjct: 184 ATKNIETSISDYLKIINAKTAALFSAAAEVGPIIAGYGHEERLALREYGTFLGLAFQLID 243 Query: 226 DLLD 229 D LD Sbjct: 244 DALD 247 >gi|312214262|emb|CBX94255.1| hypothetical protein [Leptosphaeria maculans] Length = 941 Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 48/166 (28%), Positives = 92/166 (55%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RR P+ +I++ A++AG+ LL A S Sbjct: 199 RLAEITELIHTASLLHDDV--IDHSVSRRSAPSANIEFGNKMAVLAGDFLLGRA----SV 252 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183 +L+D ++L+ ++ N ++ G+ + +++ ++ +ET + +QK + Sbjct: 253 ALARLRDPEVTELLATVIAN-----LVEGEFMQLKNTARDETNPQWTEETVSYYLQKTYL 307 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K+ +L+ +C + AI+ +S + E +G+NLG+ FQL DD+LD Sbjct: 308 KSASLISKSCRAAAILGGSSDDVVEASYLYGKNLGLAFQLVDDMLD 353 >gi|209548129|ref|YP_002280046.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533885|gb|ACI53820.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 338 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L ASLF+ +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMLTLAAASLFDYRGENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSSAACIIAEGEVLQLSVAKNMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A A ++ + L+ +G NLG+ FQL DD L Sbjct: 175 DDYLS------VIRAKTAALFAAAAEVGPIVAEAGKSGRNALKSYGMNLGLAFQLVDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|255066032|ref|ZP_05317887.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256] gi|255049577|gb|EET45041.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256] Length = 324 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 113/221 (51%), Gaps = 15/221 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 L E+ R++ +++ + Q+ + +Q ++SA GGK++R + A + Sbjct: 12 LPEDLSRVNEVINQAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAAKSVGYD 64 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L T AF Sbjct: 65 GDKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLYTRAF 122 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 +++ + +R +++ NI +G + Q+++I + I E Q + + KT L Sbjct: 123 QLMVDSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEAQYVQVIQYKTAKL 176 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + GAI+ +A+ ++ L+ +G +G FQ+ DD+LD Sbjct: 177 FEAAAQVGAILGNAAPEHEQALKDYGMYVGTAFQIIDDVLD 217 >gi|332289056|ref|YP_004419908.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179] gi|330431952|gb|AEC17011.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179] Length = 323 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 10/207 (4%) Query: 32 QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 Q Q + L++ + + ++ GGK+IR + A+ N + IE IH +L+H Sbjct: 24 QLQSDVALINQLSFYIINGGGKRIRPLIAVLVANALNYQGDRHITCATFIEFIHTATLLH 83 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D +RRGK T + + +++ G+ + T AF++++ +L Q+M Sbjct: 84 DDV--VDESTLRRGKDTANAIFGNAASVLVGDFIYTRAFQLMA----RLGSLPVMQVMSD 137 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + I +L Q+++ D E + KT L A E A+++ A++ + + Sbjct: 138 AVNVIAAGEVL--QLMNCNDPDTTEQSYMQVIYSKTARLFEVAAECSALLSEATEQQVQA 195 Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236 ++ +G LG FQL DD+LD D+ K Sbjct: 196 MKLYGRYLGTAFQLIDDVLDYCADVDK 222 >gi|191639107|ref|YP_001988273.1| Polyprenyl synthetase family protein [Lactobacillus casei BL23] gi|239630025|ref|ZP_04673056.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067168|ref|YP_003789191.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str. Zhang] gi|190713409|emb|CAQ67415.1| Polyprenyl synthetase family protein [Lactobacillus casei BL23] gi|239527637|gb|EEQ66638.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439575|gb|ADK19341.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str. Zhang] gi|327383175|gb|AEA54651.1| Octaprenyl-diphosphate synthase protein [Lactobacillus casei LC2W] gi|327386359|gb|AEA57833.1| Octaprenyl-diphosphate synthase protein [Lactobacillus casei BD-II] Length = 322 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 13/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +RS L+ A L N ++ + GAAIE +H +L+HDD+ +D+ +RRG TV Sbjct: 45 GGKMLRSGLMLMLARLGNPDNDDLITAGAAIEALHLATLVHDDV--LDHADLRRGSDTVS 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + AI AG+ L F+++S T L N R +M + Q ++ Sbjct: 103 AKSGNREAIYAGDFLFAIYFQLLSEQNPATTDLATNAR--VMKHIFMGEVDQNGPSAPLI 160 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E++ KT AL A +GA + EK+ FG LG+ FQ+ D Sbjct: 161 PSVSEYLKAI------AGKTAALFALATYTGATIGQLDFTEKKAAYRFGRQLGMAFQMID 214 Query: 226 DLLDCEE 232 DLLD + Sbjct: 215 DLLDYTQ 221 >gi|116495626|ref|YP_807360.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC 334] gi|116105776|gb|ABJ70918.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC 334] Length = 322 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 13/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +RS L+ A L N ++ + GAAIE +H +L+HDD+ +D+ +RRG TV Sbjct: 45 GGKMLRSGLMLMLARLGNPDNDDLITAGAAIEALHLATLVHDDV--LDHADLRRGSDTVS 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + AI AG+ L F+++S T L N R +M + Q ++ Sbjct: 103 AKSGNREAIYAGDFLFAIYFQLLSEQNPATTDLATNAR--VMKHIFMGEVDQNGPSAPLI 160 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E++ KT AL A +GA + EK+ FG LG+ FQ+ D Sbjct: 161 PSVSEYLKAI------AGKTAALFALATYTGATIGQLDFTEKKAAYRFGRQLGMAFQMID 214 Query: 226 DLLDCEE 232 DLLD + Sbjct: 215 DLLDYTQ 221 >gi|258676437|gb|ACV87215.1| solanesyl diphosphate synthase [Trypanosoma cruzi] gi|258676439|gb|ACV87216.1| solanesyl diphosphate synthase [Trypanosoma cruzi] gi|258676441|gb|ACV87217.1| solanesyl diphosphate synthase [Trypanosoma cruzi] gi|258676443|gb|ACV87218.1| solanesyl diphosphate synthase [Trypanosoma cruzi] gi|258676445|gb|ACV87219.1| solanesyl diphosphate synthase [Trypanosoma cruzi] gi|322816245|gb|EFZ24624.1| farnesyl synthetase, putative [Trypanosoma cruzi] Length = 363 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 13/162 (8%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 LR+G E +H +L+HDD+ MDN RRG+PTVH YD A++AG+ LL A I+ Sbjct: 114 LRLGEITELLHTATLVHDDV--MDNSNTRRGQPTVHCLYDAKRAVLAGDFLLARASIWIA 171 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 + N R L++S L+ + G+M+ + D D KT +L+ + Sbjct: 172 A-----LGNSRVVLLMS----TALEDLAAGEMMQM-DGCFDIESYEQKSYCKTASLIANS 221 Query: 193 CESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 S A++A E FG++LGI FQ+ DD LD D Sbjct: 222 LASTAVLAGLPNTAYEEAAAKFGKHLGIAFQIVDDCLDITGD 263 >gi|309378666|emb|CBX22737.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 324 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + ++ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGRSVGYDNEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|304407206|ref|ZP_07388859.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] gi|304343647|gb|EFM09488.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] Length = 794 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 7/199 (3%) Query: 39 LLSAIRYALLGG-KKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L+ A Y+L GG K++R L + + + + + ++E +H SLI DDLPS D Sbjct: 534 LIDAANYSLTGGGKRLRPILTWVMGVQQYGMRPESLVPLLRSLEYMHTASLIFDDLPSQD 593 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRG+ T+H +D TA + G L+ A + +S + + RS L L + Sbjct: 594 NAPTRRGRATLHEVHDSATAELTGLLLIQRATQEQAS---LAQFDPRSVLALIRYSSQKA 650 Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + + GQ +D+ + + + Q+ I KTG A AI+A A + E L+ F Sbjct: 651 EDLCAGQAMDLNAKGKPLTLEQLNAICFYKTGIAFEAALVMPAILAQAPEQEIGLLKSFA 710 Query: 215 ENLGIIFQLADDLLDCEED 233 + GI FQ+ DDLLD E D Sbjct: 711 YHAGIAFQIKDDLLDVEGD 729 >gi|225685204|gb|EEH23488.1| prenyl transferase [Paracoccidioides brasiliensis Pb03] Length = 450 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 89/162 (54%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++++ A++AG+ LL A ++ Sbjct: 242 RLAEITEVIHTASLLHDDV--IDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRASVALA- 298 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG---MLGGQMLDIQDEFIDETQV-FMIQK--MKTGA 187 +L+D +L+ ++ N+ ++G L LD ++ F E + + +QK +K+ + Sbjct: 299 ---RLRDPEVIELVATVIANL-IEGEFMQLRNTELDEENPFFTEEAIAYYLQKTYLKSAS 354 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + A++ H+S E +G NLG+ FQL DD+LD Sbjct: 355 LISKSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLD 396 >gi|227533817|ref|ZP_03963866.1| possible trans-hexaprenyltranstransferase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188547|gb|EEI68614.1| possible trans-hexaprenyltranstransferase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 312 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 13/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +RS L+ A L N ++ + GAAIE +H +L+HDD+ +D+ +RRG TV Sbjct: 35 GGKMLRSGLMLMLARLGNPDNDDLITAGAAIEALHLATLVHDDV--LDHADLRRGSDTVS 92 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + AI AG+ L F+++S T L N R +M + Q ++ Sbjct: 93 AKSGNREAIYAGDFLFAIYFQLLSEQNPATTDLATNAR--VMKHIFMGEVDQNGPSAPLI 150 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E++ KT AL A +GA + EK+ FG LG+ FQ+ D Sbjct: 151 PSVSEYLKAI------AGKTAALFALATYTGATIGQLDFTEKKAAYRFGRQLGMAFQMID 204 Query: 226 DLLDCEE 232 DLLD + Sbjct: 205 DLLDYTQ 211 >gi|86356521|ref|YP_468413.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42] gi|86280623|gb|ABC89686.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42] Length = 346 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L ASLF+ +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 65 GGKRLRPMLTLAAASLFDYRGDNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 122 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 123 MIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTE 182 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A A ++ + L+ +G NLG+ FQL DD L Sbjct: 183 DDYLS------VIRAKTAALFAAAAEVGPIVAEAGRSGRNALKSYGMNLGLAFQLVDDAL 236 Query: 229 D 229 D Sbjct: 237 D 237 >gi|32491227|ref|NP_871481.1| hypothetical protein WGLp478 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166434|dbj|BAC24624.1| ispB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 323 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 18/193 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK IR + A N + + + IE IH +L+HDD+ +D+ RRG +V+ Sbjct: 43 NGKFIRPIAIILAAKSLFYNKKKHIILASLIELIHMSTLLHDDI--IDDAKKRRGNASVN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + + I+ G+ + T AF++IS +RS + + N + ++ G++L Q Sbjct: 101 VVFGNIPTILIGDFIYTRAFQMISK--------LRSFKIFKIISN-AVNMIVEGEIL--Q 149 Query: 169 DEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + + + + M KT L + +S AI++ +S E++ + +G LGI FQ+ Sbjct: 150 LTYCNSVDITIKNYMQIIYKKTAKLFEVSLQSAAILSKSSYKEEQAFKNYGRYLGISFQI 209 Query: 224 ADDLLDCEEDLPK 236 DD LD + D K Sbjct: 210 IDDFLDYKSDFKK 222 >gi|301064156|ref|ZP_07204603.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium NaphS2] gi|300441776|gb|EFK06094.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium NaphS2] Length = 325 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 15/189 (7%) Query: 45 YALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 YALLG GK++R + L + E IH SL+HDD+ +DN IRR Sbjct: 39 YALLGEGKRLRPLIFVLSCQLCGYGGEDLYPLSTVFEYIHTSSLLHDDV--LDNAEIRRR 96 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 KP+ + + A++ G+ L + A I S + + SLT M GQ Sbjct: 97 KPSSNQIWGNQAAVLEGDFLFSKALSIAVSANS-------VPFISSLTK--ATMRMSEGQ 147 Query: 164 MLDI--QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 +L++ D+ +M I KT L+ AC GAI++ +S + L FG ++GI Sbjct: 148 ILELVHTDDLETGRDTYMQIINAKTAVLISAACGCGAIVSGSSPEIEASLTRFGRSVGIA 207 Query: 221 FQLADDLLD 229 FQL DDLLD Sbjct: 208 FQLVDDLLD 216 >gi|304386506|ref|ZP_07368794.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091] gi|304339335|gb|EFM05407.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091] Length = 324 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVDSGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS + L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|259502679|ref|ZP_05745581.1| polyprenyl synthetase [Lactobacillus antri DSM 16041] gi|259169324|gb|EEW53819.1| polyprenyl synthetase [Lactobacillus antri DSM 16041] Length = 288 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 18/188 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK +R L+ + +F + +++ A+IE +H +LIHDD+ +D+ RRG Sbjct: 5 GGKYLRPALLLLVSRMFTTDSQDDERLVKLAASIEVLHMATLIHDDI--IDDSPERRGAV 62 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-- 161 ++ ++ + TA+ AG+ L T F+++ + P + + +Q M + L G LG Sbjct: 63 SIQARFGKDTAVYAGDLLFTIFFDLLLEAIPSSAYL-RVNAQAMRQI-----LDGELGQM 116 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 GQ ++Q D K KT AL A + GA A + ++ FG+ LGI F Sbjct: 117 GQRFNLQQTLAD---YLANVKGKTAALFKLAAQEGAHFAGGTADQVASAAAFGQQLGIAF 173 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 174 QMLDDILD 181 >gi|83648584|ref|YP_437019.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC 2396] gi|83636627|gb|ABC32594.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC 2396] Length = 322 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 8/183 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV ++ N L++ A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLVSNALNATEKHYLKLAAIIEFLHTATLLHDDV--VDTSDLRRGRDTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ L + AF+++ +L+D ++ + T+ I +L Q+ + + Sbjct: 101 AKWGNAPSVLVGDFLYSRAFQMM----VELRDMDVMSVLANATNVIAEGEVL--QLTNCK 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + KT L A S AI+ AS ++ FG LGI FQL DD+L Sbjct: 155 NPDITEAQYMEVITAKTAMLFEAASHSAAILCQASAETTSDMKEFGLELGIAFQLIDDVL 214 Query: 229 DCE 231 D + Sbjct: 215 DYQ 217 >gi|294669816|ref|ZP_06734875.1| hypothetical protein NEIELOOT_01709 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308209|gb|EFE49452.1| hypothetical protein NEIELOOT_01709 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 122 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 1/93 (1%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +LLL + Q L +RYA L GGK++R LV + L AAIE Sbjct: 18 ELLLARLMPSENQLPQSLHETMRYAALDGGKRLRPLLVLAASELGEAVPDAVEAAMAAIE 77 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113 IH YSL+HDD+P+MDN +RRG+PT HI+Y E Sbjct: 78 LIHVYSLVHDDMPAMDNDSLRRGRPTCHIRYGE 110 >gi|311772001|pdb|3AQB|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate Synthase In Complex With Magnesium gi|311772003|pdb|3AQB|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate Synthase In Complex With Magnesium gi|311772005|pdb|3AQC|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate Synthase In Complex With Magnesium And Fpp Analogue gi|311772007|pdb|3AQC|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate Synthase In Complex With Magnesium And Fpp Analogue gi|2982681|dbj|BAA25268.1| component B of hexaprenyl diphosphate synthase [Micrococcus luteus] Length = 325 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 14/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R V L + +R ++E +H SL+HDD +DN +RRG +VH Sbjct: 43 GGKRVRPMFVLLSGFLNDTQKDDLIRTAVSLELVHMASLVHDDY--IDNSDMRRGNTSVH 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I +D+ TAI G+ LL A + I++ I S+ +L + G+ + Sbjct: 101 IAFDKDTAIRTGHFLLARALQNIATINNSKFHQIFSKTILEVCF---------GEFDQMA 151 Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D F + T KT L+ +C GA+ + + ++ FG +G+ +Q+ D Sbjct: 152 DRFNYPVSFTAYLRRINRKTAILIEASCHLGALSSQLDEQSTYHIKQFGHCIGMSYQIID 211 Query: 226 DLLDCEED 233 D+LD D Sbjct: 212 DILDYTSD 219 >gi|217974480|ref|YP_002359231.1| polyprenyl synthetase [Shewanella baltica OS223] gi|217499615|gb|ACK47808.1| Polyprenyl synthetase [Shewanella baltica OS223] Length = 331 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPLLSVLAARAVSYEGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L D+++ +L+ T N+ +G + Q+++ Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSMKVLRVLADTTNVLAEGEVL-QLMNCN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A A+ ++ L +G+ LG FQL DDLL Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAGVLAGATLEQETALGNYGKYLGTAFQLTDDLL 222 Query: 229 DCEED 233 D D Sbjct: 223 DYTAD 227 >gi|315498623|ref|YP_004087427.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48] gi|315416635|gb|ADU13276.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48] Length = 343 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + +L ++ AA+E IH +L+HDD+ +D+ +RRGK H Sbjct: 63 GGKRLRPLLCVAAARVAGTTNLHHRKLSAAVEFIHTATLLHDDV--VDSSQLRRGKVAAH 120 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + ++++ G+ L AFE++ D++++ +LS + +G + Q++ Sbjct: 121 LIWGAPSSVLVGDFLFARAFELMVE-----TDSLQALGILSKASGVIAEGEVL-QLMKAY 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E I KT L A ESGA+ A AS ++ LR +G NLG+ FQ+ DD L Sbjct: 175 DVNLTEATYIDIIAAKTAVLFAAAAESGAVAAGASSAGQQALRDYGLNLGLAFQIQDDAL 234 Query: 229 D 229 D Sbjct: 235 D 235 >gi|73748232|ref|YP_307471.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp. CBDB1] gi|73659948|emb|CAI82555.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp. CBDB1] Length = 326 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 14/188 (7%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y L+GGK +RS L A F L + + E +H +L+HDD ++D RRG+ Sbjct: 44 YILVGGKVLRSALSMLSAMCFGAGIKKVLPLATSSEMLHIATLVHDD--AIDKADTRRGR 101 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 TV+ + AI+ G+ L ++ N+ + S T LQ + G++ Sbjct: 102 RTVNAVWGLEKAILLGDFLFA-----HAAETAAETGNMGIVTLFSQT----LQIIASGEL 152 Query: 165 LDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 F D++ ++++ KT AL A + GAI+A AS +++E +R +G NLG+ F Sbjct: 153 KQAYASFNPDQSYENYLERISGKTAALFVMATKGGAILADASSSDEEIMRSYGYNLGLSF 212 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 213 QIVDDILD 220 >gi|162147610|ref|YP_001602071.1| octaprenyl-diphosphate synthase [Gluconacetobacter diazotrophicus PAl 5] gi|209542242|ref|YP_002274471.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161786187|emb|CAP55769.1| putative octaprenyl-diphosphate synthase [Gluconacetobacter diazotrophicus PAl 5] gi|209529919|gb|ACI49856.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 358 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 12/189 (6%) Query: 49 GGKKIRSFLVTECASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R L A L + H + + A +E IH +L+HDD+ +D +RRG Sbjct: 73 GGKRLRPLLTLAAARLCDYPAGPEHQRHVSLAACVEFIHTATLLHDDV--VDESLLRRGL 130 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + + + +++ G+ L +F++++ +++ +LS +G + QM Sbjct: 131 ASANAVFGNKASVLVGDFLFARSFQLMTD-----DGSLKVMAILSSASATIAEGEVL-QM 184 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D Q + KT AL AC GA++A + E+ L FG NLG+ FQL Sbjct: 185 STQNDLSTSVEQYLEVIHGKTAALFAAACRVGAVVAERPEAEELALESFGTNLGMAFQLV 244 Query: 225 DDLLDCEED 233 DD LD D Sbjct: 245 DDALDYAAD 253 >gi|255018351|ref|ZP_05290477.1| hypothetical protein LmonF_12731 [Listeria monocytogenes FSL F2-515] Length = 183 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 11/126 (8%) Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDE-- 170 ++AG+ LLT AF I++ DN+ + ++L + I G +GM+GGQ+ D++ E Sbjct: 1 MLAGDALLTLAFSILAED-----DNLSFETRIALINQISFSSGAEGMVGGQLADMEAENK 55 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + ++ I KTG L+ +A S A +A A + +RLR F EN+GI FQ++DD+LD Sbjct: 56 HVTLEELSSIHARKTGELLIYAVTSAAKIAEADLEQTKRLRIFAENIGIGFQISDDILDV 115 Query: 231 EEDLPK 236 D K Sbjct: 116 IGDETK 121 >gi|212636824|ref|YP_002313349.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3] gi|212558308|gb|ACJ30762.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3] Length = 323 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + N + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLSILAARAIDYNGESHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+LK ++ +L+ N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELK-SLEVLEILADATNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A +S+ + L +G+ LG FQL DDLL Sbjct: 155 DPDTTEDSYMRVIYCKTAKLFEAATRLAGLLAESSEEVQTALAEYGKFLGTAFQLTDDLL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|83594282|ref|YP_428034.1| farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170] gi|83577196|gb|ABC23747.1| Farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170] Length = 360 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 13/192 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L ++ A +E IH +L+HDD+ +D +RRG+ + + Sbjct: 77 GGKRLRPLLTLASARLCGYEGERHAQLAACVEFIHTATLLHDDV--VDESLLRRGRDSAN 134 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + +FE++ ++D + L +LS + +G + Q++ Sbjct: 135 ALWGNKASVLVGDFLFSRSFELM------VEDGVLKVLGILSHASRVIAEGEVA-QLITA 187 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E Q + + KT L AC GA++A + E+E L +G LGI FQL DD Sbjct: 188 NDMATTEAQYLEVIRGKTAQLFAAACRIGAVVAERPEAEEEALDTYGMTLGIAFQLVDDY 247 Query: 228 LDC---EEDLPK 236 LD ++DL K Sbjct: 248 LDYSARQQDLGK 259 >gi|332983459|ref|YP_004464900.1| polyprenyl synthetase [Mahella australiensis 50-1 BON] gi|332701137|gb|AEE98078.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON] Length = 323 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV F + A E IH SL+HDD+ M + RR PT++ Sbjct: 44 GGKRIRPRLVLLSGMCFGELDEKMIHAAVAAELIHTASLVHDDIIDMSD--YRRNNPTIN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQMLDI 167 A++AG+ L AFEI+S +L+ S+ + + +Q M G+++ Sbjct: 102 SISGNHVAVLAGDFLFAKAFEILS----------EHELINSMLYFVNAIQNMCSGEIVQS 151 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 F + E KT +L+C C +GA A A +E + FG +G FQ+ Sbjct: 152 YRRFDIRVTEQDYMDYIDKKTASLICACCMAGAQSAGAGSHEINLMGSFGYKIGRAFQIT 211 Query: 225 DDLLD 229 DD+LD Sbjct: 212 DDILD 216 >gi|331697463|ref|YP_004333702.1| Dimethylallyltranstransferase [Pseudonocardia dioxanivorans CB1190] gi|326952152|gb|AEA25849.1| Dimethylallyltranstransferase [Pseudonocardia dioxanivorans CB1190] Length = 356 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 11/188 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A+ + A+E +H +SL+HDDL MD RR + TV Sbjct: 71 GGKAVRPALALLSAAAAGAGVEVGVPGAVAVELVHNFSLLHDDL--MDGDTERRHRTTVW 128 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +Q+ +AI+ G+ +L A E++ + + +L++T + ++ GQ D+ Sbjct: 129 VQWGASSAILCGDAMLALAQEVLL--EAPSPHAAPAARLLAVT----TRELIRGQAEDLA 182 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D+ V + KTG+L+ + GA++A A + E L +G +G+ FQL D Sbjct: 183 FESRDDVGVDECLSMAAGKTGSLLAASASIGAVLAGAPAAQTEALHTYGHEVGMAFQLVD 242 Query: 226 DLLDCEED 233 DLL D Sbjct: 243 DLLGIWGD 250 >gi|300857173|ref|YP_003782157.1| putative polyprenyl synthetase [Clostridium ljungdahlii DSM 13528] gi|300437288|gb|ADK17055.1| predicted polyprenyl synthetase [Clostridium ljungdahlii DSM 13528] Length = 274 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 22/190 (11%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 + GK++R L A + + LT+ +++ ++E IH SLIHDD+ +D +R Sbjct: 43 IPGKRLRPTLTFLSAGAIS-SELTSSAKHNLIQLSISLELIHSASLIHDDI--IDGDLLR 99 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGM 159 RG+ T++ + A++AG+ L + AF I S P+ +Q+M +T ++ + Sbjct: 100 RGQKTLNKTFGNKIAVLAGDALYSRAFTIFSDTLPRE------FAQVMGRVTESMSV--- 150 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++L+ + D F I KT + M C G +A+A E L +GENLG+ Sbjct: 151 --AEILNANNPSPDRETYFKIILGKTASFMSACCRLGGSIAYAPYEESNMLSKYGENLGM 208 Query: 220 IFQLADDLLD 229 +Q+ DD +D Sbjct: 209 AYQILDDYID 218 >gi|241912483|gb|ACS71955.1| putative geranylgeranyl pyrophosphate synthase [Azospirillum brasilense] Length = 338 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + A +E IH +L+HDD+ +D +RRG + + Sbjct: 57 GGKRLRPVLTLAAAELCGYKGEDHKMLAAVVEFIHTATLLHDDV--VDESDLRRGLASAN 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ + D +R +LS + +G + Q+ Sbjct: 115 AVFGNKASVLVGDFLFSRSFELMVEVGSL--DVLR---ILSKASAVIAEGEVL-QLRTTN 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + K KT L AC GA++A Q E+ L +G NLGI FQL DD+L Sbjct: 169 DTETSEQAYLEVIKAKTAELFAAACRVGAVVAARPQAEELALYDYGMNLGIAFQLVDDVL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|227499442|ref|ZP_03929553.1| possible geranyltranstransferase [Anaerococcus tetradius ATCC 35098] gi|227218504|gb|EEI83747.1| possible geranyltranstransferase [Anaerococcus tetradius ATCC 35098] Length = 275 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 16/196 (8%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGY 99 A+ YAL GK+IR+ L E L + N + L AIE I YSL+HDDLP+MD+ Sbjct: 34 AMLYALEAGKRIRASLFLETRRL-SRNQIDKNDLLFALAIEMIQAYSLVHDDLPAMDDDD 92 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYA----FEIISSPKTQLKDNIRSQLMLSLTHNIG 155 RRGK ++H + E I+ G+ LL A FEI S + +K SQ +LS T G Sbjct: 93 YRRGKESLHKHFGEDLGILTGDALLNEATKLMFEIASRDSSFIK---ASQYLLSKT---G 146 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+ GQ+LD++ + + F+I+ KT A +GA++ Q+ L + Sbjct: 147 KDGMIEGQILDLRRR-RNYNKDFIIEVYDKKTADFFKGAIVAGALVNGFDQDTINSLERY 205 Query: 214 GENLGIIFQLADDLLD 229 LG+ FQ+ DDLL+ Sbjct: 206 AYYLGLGFQIQDDLLE 221 >gi|206900678|ref|YP_002251005.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps) [Dictyoglomus thermophilum H-6-12] gi|206739781|gb|ACI18839.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps) [Dictyoglomus thermophilum H-6-12] Length = 343 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 112/237 (47%), Gaps = 17/237 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL-LSAIRYALLGGKKIRSFLVTECAS 63 + +KLQEN + T + + L TA HM D + ++ IR GK++R Sbjct: 13 IENKLQENWSKFSTNIP-IHLITAYHMGWVDEDLIPITNIR----RGKRLRPLFCVLVNQ 67 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 N AL +G+AIE +H +SL+HDD+ D R GK TV + E AI G+ L Sbjct: 68 TLNGVLDDALEIGSAIEFLHNFSLVHDDIQDQDEK--RHGKWTVWKIWGEAQAINVGDLL 125 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 F+++++ K+ L S+ + LT I + ++ GQ LDI E I + M+ Sbjct: 126 FNMVFQVLTNLKSPLL---LSKSLKELTETI--RELIEGQYLDISFEKRKDISLKEYLMM 180 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 KT L + GA A + + + G N G+ FQ+ADD + D P+K Sbjct: 181 IDKKTAKLFSTSFYLGAFSATYKEEISKLFQDIGRNFGLFFQIADDAMGIWGD-PEK 236 >gi|315646907|ref|ZP_07900022.1| Polyprenyl synthetase [Paenibacillus vortex V453] gi|315277837|gb|EFU41161.1| Polyprenyl synthetase [Paenibacillus vortex V453] Length = 794 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 3/200 (1%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L+ Y L G GK++R L + + + + + ++E +H SLI DDLPS D Sbjct: 534 LIDTANYTLEGDGKRLRPILTWVMGVNEYGLEPSAIVPLLRSLEYMHTASLIFDDLPSQD 593 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRG+PT+H ++ TA I G L+ A E SS ++ S + S + G Sbjct: 594 NASTRRGRPTLHQVHNSATAEITGLYLIQKAIEEQSSLVGFDASSVVSLIQYS-SKRAGE 652 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 M LD + + + Q+ MI KTG + AI+A ++ E L+ F + Sbjct: 653 MCMGQAMDLDSKGKKLTLEQLNMICFYKTGIAFEASLVMPAILAQVNEAEIALLKKFAYH 712 Query: 217 LGIIFQLADDLLDCEEDLPK 236 GI FQ+ DDLLD + DL + Sbjct: 713 AGIAFQIKDDLLDVQGDLER 732 >gi|260653869|dbj|BAI44337.1| geranylgeranyl diphosphate synthase [Streptomyces melanosporofaciens] Length = 359 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 114/251 (45%), Gaps = 38/251 (15%) Query: 6 PSKLQENS--KRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECA 62 P +L ++ K +D +L+D L A H QH+ LS + + L GGK+IR L C Sbjct: 8 PGRLDADTVRKSVDVVLEDFLTAKA-HTTPQHHLPYLSGLLKDFLSGGKRIRPLL---CV 63 Query: 63 SLFNV-----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------- 109 + + + RV A +E H ++LIHDD+ MD+ RRG+PT+H Sbjct: 64 TGWQAVGGGEDTEPVFRVAACLEMFHAFALIHDDV--MDDSDTRRGRPTIHRTLAALCAT 121 Query: 110 --------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 ++ A++ G+ LT++ E++ S ++ +L L + + ML Sbjct: 122 DRRPEQIERFGVSGAVLLGDLALTWSDELLHSAGLT---PVQFDAVLPLLSEMRTEVML- 177 Query: 162 GQMLDIQ--DEFIDETQVFM-IQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENL 217 GQ LD+Q E D+ + + + + KT GA +A A E + L Sbjct: 178 GQYLDLQATGELTDDVEATLTVNRYKTAKYTIERPLHVGAAIAGAGPEAMEAFTAYALPL 237 Query: 218 GIIFQLADDLL 228 G FQL DDLL Sbjct: 238 GEAFQLRDDLL 248 >gi|197119777|ref|YP_002140204.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem] gi|197089137|gb|ACH40408.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem] Length = 322 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV A L + ++ + + +E IH +L+HDD+ +DN +RRG + + Sbjct: 41 GGKRIRPGLVLLAARLCGYDGNRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F ++ + ++R +L+ I +G + Q++ Sbjct: 99 TLWGNEASVLVGDFLFSKSFSLMVT-----DGDLRILKVLADATTIIAEGEVL-QLVCTS 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I + + + KT L+ ACE GAI+ A ++ L +G +LGI FQL DD L Sbjct: 153 DLDITVERYIEVVRSKTAILLSAACEVGAILGEADPVHRQALADYGMDLGIAFQLMDDTL 212 Query: 229 D 229 D Sbjct: 213 D 213 >gi|226941879|ref|YP_002796953.1| IspB [Laribacter hongkongensis HLHK9] gi|226716806|gb|ACO75944.1| IspB [Laribacter hongkongensis HLHK9] Length = 322 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 11/218 (5%) Query: 19 ILDDLLLQTASHMQTQHNDRLL--SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 I DD+L ++ H+D +L Y + GGK++R L+ A Sbjct: 10 ITDDMLAVDQVIRRSLHSDVVLIRQVAEYIIGAGGKRLRPALLILAARALGCQGPAVHEQ 69 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A IECIH +L+HDD+ +D RRG+ T + + +++ G+ L T AF+++ Sbjct: 70 AAMIECIHTATLLHDDV--VDESDKRRGRDTANAMFGNAASVLVGDFLYTRAFQMMVHTH 127 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195 + +R +++ NI +G + Q+L+I + + ET+ + + KT L A Sbjct: 128 S-----LRVLEIMAEATNIIAEGEVM-QLLNIGNTDLTETEYLQVIQYKTAKLFEAAGRV 181 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GA++A A+ ++ L +G +LG FQ+ DD+LD D Sbjct: 182 GALLAGATPEQEAALAGYGMHLGTAFQIIDDVLDYSGD 219 >gi|66814354|ref|XP_641356.1| hypothetical protein DDB_G0280293 [Dictyostelium discoideum AX4] gi|74855905|sp|Q54VJ9|DPS1_DICDI RecName: Full=Decaprenyl-diphosphate synthase; AltName: Full=All-trans-decaprenyl-diphosphate synthase subunit 1; AltName: Full=Coenzyme Q biosynthesis protein 1; AltName: Full=Decaprenyl pyrophosphate synthase; AltName: Full=Trans-prenyltransferase; Short=TPT gi|60469379|gb|EAL67373.1| hypothetical protein DDB_G0280293 [Dictyostelium discoideum AX4] Length = 456 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 13/206 (6%) Query: 27 TASHMQTQHNDRLLSAIR--YALLGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIH 83 T S ++ +LS+I Y L GK+IR +V + +L + H + L++ +E IH Sbjct: 157 TYSPSPSKKTHPILSSISSYYFELKGKRIRPTIVLLLSKALSSTVHGSQLKLAEIVEMIH 216 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 SL+HDD+ +D RR +++ Y AI+ G+ LL A ++S+ + Sbjct: 217 TASLVHDDV--IDEASTRRDVISINHSYTNKLAILCGDYLLARASVVLSTIRNPDVTECM 274 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 S + L +Q G + D ++ +T +KTG+L+ +C S AI++ A Sbjct: 275 STALAELVEGEFMQAKSNGVVS--FDNYLQKTY------LKTGSLITNSCRSAAILSGAD 326 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229 N FG+NLG+ FQ+ DDLLD Sbjct: 327 SNIINISTEFGKNLGLAFQIVDDLLD 352 >gi|294792178|ref|ZP_06757326.1| octaprenyl-diphosphate synthase [Veillonella sp. 6_1_27] gi|294457408|gb|EFG25770.1| octaprenyl-diphosphate synthase [Veillonella sp. 6_1_27] Length = 323 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 14/187 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R+ L A+ +++ A+E +H +LIHDD+ +D IRRG+ T+H Sbjct: 46 GGKRLRAQLCLLIANAGTSIERQRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI++G+ L AF+I+S + S ++ L G+ + ++ Sbjct: 104 MHKGNKVAILSGDYLFAKAFKIVSEMTNMKYLQVFSHIITCLVE---------GEFMQME 154 Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + ID+ + +M + K A C E G ++ ++E L+ +G LG+ FQ+ D Sbjct: 155 DVYRIDQGIERYMTKTQKKTADFMEGCMELGGLLGDWQEDEIIELKKYGHALGMAFQITD 214 Query: 226 DLLDCEE 232 D++D E Sbjct: 215 DIMDYRE 221 >gi|285017833|ref|YP_003375544.1| octaprenyl-diphosphate synthase [Xanthomonas albilineans GPE PC73] gi|283473051|emb|CBA15556.1| putative octaprenyl-diphosphate synthase protein [Xanthomonas albilineans] Length = 331 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVT----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R LV C S +H ++ A IE IH +L+HDD+ +D +RRG+ Sbjct: 52 GGKRLRPMLVMLAGRACGSHGPKHH----QLAAIIEFIHTSTLLHDDV--VDESDLRRGR 105 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ L + +F+++ +L +L+ T+ I +L Q+ Sbjct: 106 STANALWGNAPSVLVGDFLYSRSFQLM----VELDSMAVMRLLADTTNRIAEGEVL--QL 159 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 L + + DE + + KT L GA+ A A+ ++ L +G +LG FQ+A Sbjct: 160 LHVHNPDTDEAAYLQVIERKTAVLFAAGTRLGALAAGATDAVQQCLYAYGMHLGYAFQIA 219 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 220 DDVLDYTAD 228 >gi|238062225|ref|ZP_04606934.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149] gi|237884036|gb|EEP72864.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149] Length = 356 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 25/189 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG P+ + Sbjct: 74 GGKRFRPLLVALGAQFGDPTDPQVVSAAVVMELTHLATLYHDDV--MDEAAVRRGAPSAN 131 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ AI+ G+ L A +I + P+ ++++ L H GQ+ + Sbjct: 132 SRWTNSVAILVGDYLFARAADISADLGPEAV---RLQARTFARLVH---------GQIAE 179 Query: 167 I------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 QD + + KTG+L+ + G + A AS E L +GE +G+ Sbjct: 180 TVGPRNGQDPV---SHYLHVIAEKTGSLIATSARFGGLFAGASATHTEALAGYGETIGVA 236 Query: 221 FQLADDLLD 229 FQL+DDLLD Sbjct: 237 FQLSDDLLD 245 >gi|302557115|ref|ZP_07309457.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000] gi|302474733|gb|EFL37826.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000] Length = 378 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 84/183 (45%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + T + A+E +H +SL+HDDL MD RR + TV Sbjct: 87 GGKAVRPALAVLSAEVTGAAPETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 144 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ +L + LT + ++ GQ DI Sbjct: 145 KVHGPAQAILVGDALFALANEVL----LELGSVEAGRATRRLT--AASRALIDGQAQDIS 198 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 199 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADDRTADALERYGYHLGLAFQAVD 258 Query: 226 DLL 228 DLL Sbjct: 259 DLL 261 >gi|297617605|ref|YP_003702764.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297145442|gb|ADI02199.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 322 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R V S ++ + + + A+E +H +L+HDD+ +DN + RRG+ TV Sbjct: 43 GGKRLRPAFVLLSGSFYSSSLDGLIPLAVALELVHMATLVHDDV--IDNSFTRRGQKTVK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++ +GN +L + +I++ + +I + + + + +Q + D+ Sbjct: 101 ACWGNRVSLYSGNYILAKSLSLIAAYERPDIIDILATVSMKVCEGEIIQML---SCFDVG 157 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + D + + KT LM +C++GA++ A ++ LR FG LG+ FQ+ DD+L Sbjct: 158 QGYKDYLRRI---ERKTALLMSLSCQTGALVGGAPADKVTVLRRFGYYLGMAFQITDDVL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|262202925|ref|YP_003274133.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247] gi|262086272|gb|ACY22240.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247] Length = 376 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 95/216 (43%), Gaps = 34/216 (15%) Query: 45 YALLGGKKIRSFLV---TECA------SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + L GGK+IR V C LRV AA+E + +LIHDD+ + Sbjct: 50 FVLQGGKRIRPVFVYAGWRCGISARAAGADAAEAADTLRVCAALELVQACALIHDDI--I 107 Query: 96 DNGYIRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIIS--SPKTQ 137 D RRG+PTVH ++ AI+AG+ L +A +++ +P Sbjct: 108 DRSDTRRGRPTVHRDFEHRHRDRQWSGDPGGFGVAAAILAGDLALAWADDLVHGLAPGAA 167 Query: 138 LKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGAL-MCFA 192 D+ + T +LGGQ LDI +E + V + + + KT A + Sbjct: 168 PDDDATPLPAPVGATWASMRTEVLGGQYLDIVNEAAGDESVQAAYQVMEYKTAAYTVARP 227 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E GA MA A + LR G +LGI FQL DDLL Sbjct: 228 LELGARMAGAPADLIADLRSVGHDLGIAFQLRDDLL 263 >gi|29828193|ref|NP_822827.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] gi|29605295|dbj|BAC69362.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] Length = 376 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 85 GGKAVRPALAVLSAQAAGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 142 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A EI+ T +L + + ++ GQ DI Sbjct: 143 KVHGPAQAILVGDALFALANEILLELGTVEAGRATRRLTTAS------RALIDGQAQDIS 196 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ AC GA++ A + L +G +LG+ FQ D Sbjct: 197 YEHRERVTVEECLEMEGNKTGALLACACSIGAVLGGADDRTADTLEKYGYHLGLAFQAVD 256 Query: 226 DLL 228 DLL Sbjct: 257 DLL 259 >gi|53711383|ref|YP_097375.1| octaprenyl-diphosphate synthase [Bacteroides fragilis YCH46] gi|60679701|ref|YP_209845.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis NCTC 9343] gi|253564510|ref|ZP_04841967.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_2_5] gi|265764829|ref|ZP_06093104.1| heptaprenyl diphosphate synthase component II protein [Bacteroides sp. 2_1_16] gi|52214248|dbj|BAD46841.1| octaprenyl-diphosphate synthase [Bacteroides fragilis YCH46] gi|60491135|emb|CAH05883.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis NCTC 9343] gi|251948286|gb|EES88568.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_2_5] gi|263254213|gb|EEZ25647.1| heptaprenyl diphosphate synthase component II protein [Bacteroides sp. 2_1_16] gi|301161165|emb|CBW20703.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis 638R] Length = 324 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 14/186 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A L+ L ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILVLLVAKLYGEIKPETLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166 ++ A++ G+ LL A ++ + +T R+ ++ + +G Q + G++L + Sbjct: 103 IFNNKVAVLVGDFLL--ATSLVHAERT------RNHDIIGVVACLG-QDLAEGEILQLSN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + ET F + + KT AL ++ A+ + + E R FGEN+GI FQ+ DD Sbjct: 154 VSNREYSETIYFDVIRKKTAALFAACTKAAALSVEVTDEKAEFARLFGENIGICFQIKDD 213 Query: 227 LLDCEE 232 + D E Sbjct: 214 IFDYFE 219 >gi|330994653|ref|ZP_08318576.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1] gi|329758294|gb|EGG74815.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1] Length = 334 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 12/189 (6%) Query: 49 GGKKIRSFLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R L A L + H + + A +E IH +L+HDD+ +D +RRG Sbjct: 49 GGKRLRPLLTLASARLCGYQPDATHQRHVGLAACVEFIHTATLLHDDV--VDESSLRRGM 106 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + + + +++ G+ L +F++++ + NI S ++ LQ + Sbjct: 107 ASANAVFGNKASVLVGDFLFARSFQLMTDDGSLKVMNILSSASATIAEGEVLQMSTQNDL 166 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D++++ + KT AL AC GA++A + + L +G NLG+ FQL Sbjct: 167 STRIDQYLE------VIHGKTAALFAAACRVGAVVAERDETVERALESYGTNLGMAFQLV 220 Query: 225 DDLLDCEED 233 DD LD D Sbjct: 221 DDALDYAAD 229 >gi|89900061|ref|YP_522532.1| farnesyltranstransferase [Rhodoferax ferrireducens T118] gi|89344798|gb|ABD69001.1| Farnesyltranstransferase [Rhodoferax ferrireducens T118] Length = 327 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 9/187 (4%) Query: 44 RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 RY + GGK++R L+ + A +E IH +L+HDD+ +D+ +RR Sbjct: 42 RYIIAAGGKRLRPALLLLICGALGFKGAQRFNLAAVVEFIHTSTLLHDDV--VDDSSLRR 99 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G PT + + +++ G+ L + F+++ + N+R +L+ N+ +G + Sbjct: 100 GNPTANETFGNPASVLVGDFLYSRCFQMMVDAQ-----NMRIMQVLADATNVIAEGEVQ- 153 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q++++ + +DE + + KT L + GAI+A +S +E +G+ LG FQ Sbjct: 154 QLMNMHNAELDEAGYLQVIRSKTAKLFEASARVGAILAGSSPELEEICAEYGQALGTAFQ 213 Query: 223 LADDLLD 229 + DD+LD Sbjct: 214 VIDDVLD 220 >gi|15964599|ref|NP_384952.1| putative octaprenyl-diphosphate synthase protein [Sinorhizobium meliloti 1021] gi|307309345|ref|ZP_07589008.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C] gi|307320081|ref|ZP_07599502.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83] gi|15073777|emb|CAC45418.1| Putative octaprenyl-diphosphate synthase [Sinorhizobium meliloti 1021] gi|306894296|gb|EFN25061.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83] gi|306900214|gb|EFN30832.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C] Length = 338 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L AS+F +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMLTLAAASMFGYEGDGHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGSIDALDVLSTAASVIAEGEVLQLSVAKNMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A S+ ++ L+ +G NLG+ FQL DD+L Sbjct: 175 DDYL------QVIRAKTAALFAAASEVGPIVAGGSKADRNALKSYGTNLGLAFQLVDDVL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|304383744|ref|ZP_07366203.1| octaprenyl-diphosphate synthase [Prevotella marshii DSM 16973] gi|304335268|gb|EFM01539.1| octaprenyl-diphosphate synthase [Prevotella marshii DSM 16973] Length = 327 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 12/199 (6%) Query: 34 QHNDRLLS-AIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 +H+D LLS A+ + GGK++R L+ A + A +E +H SL+HDD Sbjct: 29 EHSDGLLSMALEHIKQRGGKRMRPILILLLAKNYGTITDAAHHAAVGLELLHTASLVHDD 88 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D RRG+ +V+ Y+ A++ G+ +L+ A ++ ++ N +QL +L+ Sbjct: 89 V--VDESSERRGQSSVNATYNNKVAVLVGDYILSTALLHVAYTQSDYIINSLAQLGRTLS 146 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERL 210 LQ + +IQ+E I E + + + KT AL C + A A + NE E Sbjct: 147 KGEILQ------LTNIQNEEISEEVYYQVIEQKTAALFE-TCAAVAAKAAGASNESIEAA 199 Query: 211 RCFGENLGIIFQLADDLLD 229 R FG +LG IFQ+ DD+ D Sbjct: 200 RKFGRDLGTIFQIRDDIFD 218 >gi|258648864|ref|ZP_05736333.1| octaprenyl-diphosphate synthase [Prevotella tannerae ATCC 51259] gi|260850886|gb|EEX70755.1| octaprenyl-diphosphate synthase [Prevotella tannerae ATCC 51259] Length = 326 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 DD L Q SHM+ ++ GK +R LV A F LR +E Sbjct: 32 DDFLGQALSHMRRRN--------------GKMMRPILVLLAAKAFAPISEKTLRSAVTLE 77 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H SLIHDD+ +D+ RRG+ +V+ + A++ G+ LL+ + + L D Sbjct: 78 LLHTASLIHDDV--VDDSGERRGQASVNALFGNKVAVLVGDYLLSKSLH-----QAYLTD 130 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 ++R +++ +G + Q+ +I+ E F + + KT AL GAI A Sbjct: 131 DLRIVEIVARLGGTLAEGEVK-QLANIRQSVATEEAYFDVIRHKTAALFAACTRLGAISA 189 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + E+ FGE +G+ FQ+ DD+ D +D Sbjct: 190 DCAPATVEQAATFGEIIGLCFQIRDDIFDYYDD 222 >gi|289704598|ref|ZP_06501030.1| polyprenyl synthetase [Micrococcus luteus SK58] gi|289558678|gb|EFD51937.1| polyprenyl synthetase [Micrococcus luteus SK58] Length = 354 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 111/248 (44%), Gaps = 53/248 (21%) Query: 7 SKLQENSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 + L++ +++D L DDL TA+H LL+A GGK++R L T ASL Sbjct: 29 TALEQVEEQLDGALGFDDLFSDTAAH-------HLLAA------GGKRVRPVL-TVLASL 74 Query: 65 FNVNHLT----------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 L A + +E H +L HDD+ MD +RRG P H + Sbjct: 75 LGDPALASGEVADVDAPARQAAVVMELTHLATLYHDDV--MDEAPVRRGAPAAHRLWGNS 132 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQG-----MLGGQMLDIQ 168 AI+AG+ + A SQLM L + +Q ++ GQ+ + + Sbjct: 133 AAILAGDLIFARA----------------SQLMAELGPRPVQIQADTFERLVQGQLWETR 176 Query: 169 D--EFIDETQ-VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D + + + KTG+L+ A GA++ A + + + +GE +G+ FQLAD Sbjct: 177 GPAEGADPIEHYYAVLSGKTGSLIAAAGMLGALLGGADEAAVQVMSAYGEKVGLAFQLAD 236 Query: 226 DLLDCEED 233 DL+D D Sbjct: 237 DLIDLTGD 244 >gi|160888684|ref|ZP_02069687.1| hypothetical protein BACUNI_01101 [Bacteroides uniformis ATCC 8492] gi|156861998|gb|EDO55429.1| hypothetical protein BACUNI_01101 [Bacteroides uniformis ATCC 8492] Length = 324 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 14/186 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A LF L A+E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILVLLAAKLFGKVCPATLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166 ++ A++AG+ LL A + R+ ++ + +G Q + G++L + Sbjct: 103 IFNNKVAVLAGDYLLATALVQVGM--------TRNHDIIDIVSCLG-QDLADGELLQLSN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + E F + + KT L ++GA+ AS + E R FGE +G+ FQ+ DD Sbjct: 154 VSNLHFSEEVYFDVIRKKTAVLFAACTKAGALSVGASDEKAESARLFGEYIGLCFQIKDD 213 Query: 227 LLDCEE 232 + D E Sbjct: 214 IFDYSE 219 >gi|213021975|ref|ZP_03336422.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 226 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 102/200 (51%), Gaps = 10/200 (5%) Query: 32 QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 Q + +L++ + Y ++ GGK+IR + A + + A IE IH +L+H Sbjct: 24 QLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLH 83 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 84 DDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMS 136 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 N+ +G + Q++++ D I E + KT L A + I+A + +++ Sbjct: 137 EAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKG 195 Query: 210 LRCFGENLGIIFQLADDLLD 229 L+ +G LG FQL DDLLD Sbjct: 196 LQDYGRYLGTAFQLIDDLLD 215 >gi|193212799|ref|YP_001998752.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] gi|193086276|gb|ACF11552.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] Length = 324 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 31/205 (15%) Query: 44 RYALLG-GKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 RY L GK+IR LV C + +V + A+ V E +H +LIHDD+ +D Sbjct: 37 RYVLRQQGKQIRPTLVILGAKVCGGVGDVTYRGAIMV----ELLHSATLIHDDV--VDGA 90 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLT----YAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +RRG P+++ + +++ G+ LL+ Y+ E + RS ++S Sbjct: 91 EMRRGIPSINALWKNKISVLIGDYLLSKGLLYSLE---------NSDYRSLHLVSE---- 137 Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 ++ M G++L IQ I E + KTG+L+ +C GA A S+ E RL+ Sbjct: 138 AVRRMSEGEILQIQKTRSLDITEEDYLSVIADKTGSLIATSCAIGAASATDSEEEIARLK 197 Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236 +GE LG+ FQ+ DDLLD D K Sbjct: 198 HYGEFLGLAFQIRDDLLDYTGDSKK 222 >gi|282850553|ref|ZP_06259932.1| polyprenyl synthetase [Veillonella parvula ATCC 17745] gi|282580046|gb|EFB85450.1| polyprenyl synthetase [Veillonella parvula ATCC 17745] Length = 323 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 14/187 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R+ L A+ +++ A+E +H +LIHDD+ +D IRRG+ T+H Sbjct: 46 GGKRLRAQLCLLIANAGTSIERQRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI++G+ L AF+I+S + S ++ L G+ + ++ Sbjct: 104 MHKGNKVAILSGDYLFAKAFKIVSEMTNMKYLQVFSHIITCLVE---------GEFMQME 154 Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + ID+ + +M + K A C E G ++ ++E L+ +G LG+ FQ+ D Sbjct: 155 DVYRIDQGIERYMTKTQKKTADFMEGCMELGGLLGDWQEDEIIELKKYGHALGMAFQITD 214 Query: 226 DLLDCEE 232 D++D E Sbjct: 215 DIMDYRE 221 >gi|294794043|ref|ZP_06759180.1| putative heptaprenyl diphosphate synthase component II [Veillonella sp. 3_1_44] gi|294455613|gb|EFG23985.1| putative heptaprenyl diphosphate synthase component II [Veillonella sp. 3_1_44] Length = 323 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 14/187 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R+ L A+ +++ A+E +H +LIHDD+ +D IRRG+ T+H Sbjct: 46 GGKRLRAQLCLLIANAGTSIERQRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI++G+ L AF+I+S + S ++ L G+ + ++ Sbjct: 104 MHKGNKVAILSGDYLFAKAFKIVSEMTNMKYLQVFSHIITCLVE---------GEFMQME 154 Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + ID+ + +M + K A C E G ++ ++E L+ +G LG+ FQ+ D Sbjct: 155 DVYRIDQGIERYMTKTQKKTADFMEGCMELGGLLGDWQESEIIELKKYGHALGMAFQITD 214 Query: 226 DLLDCEE 232 D++D E Sbjct: 215 DIMDYRE 221 >gi|254442381|ref|ZP_05055857.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] gi|198256689|gb|EDY80997.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] Length = 312 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 16/213 (7%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA--LRVGA 77 LD L++ S + + + +I GGK+IR L+ + N + +R+ A Sbjct: 4 LDAFLMEQISQFEPEIREHAAYSID---TGGKRIRPSLIF-FSGWQNDGQVDEKLVRLAA 59 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKT 136 +E +H +L+HDD+ MD IRR + TV +Y+ TA++ G+ L ++A + + P Sbjct: 60 VVETVHLATLVHDDI--MDEADIRRNRATVAKKYNNATAVLLGDALFSHAVYLATQFPTN 117 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196 ++ +I + T I LQ M G D +D F + +KT L +C G Sbjct: 118 EVCRDIAVSMRQVCTGEI-LQTMQRG------DPDLDMATYFRVIDLKTAELFRVSCHLG 170 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A +A + + FG +LGI +Q+ DD+ D Sbjct: 171 ARLAGFEDSYVQAAGAFGRHLGIAYQIYDDMTD 203 >gi|237756556|ref|ZP_04585080.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691284|gb|EEP60368.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium yellowstonense SS-5] Length = 317 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 19/187 (10%) Query: 49 GGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R +LV + + + N N + AA+E +H SL+HDD+ +D +RRGKPT Sbjct: 35 GGKRVRPYLVLKFSKIMKNKNEEKDYILAAALEYLHTASLLHDDV--VDGSQLRRGKPTA 92 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQML 165 + + T ++ G+ + A + S+ + + N+ ++ M GQ+L Sbjct: 93 NRIFGNDTTVLTGDYMYANALYLFSTHGD-----------IDMIKNVSQTVKKMAEGQLL 141 Query: 166 D---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + I D I + + I + KT AL C G + ++ K++ +G N+G+ FQ Sbjct: 142 ELKKIADFDITLQEYYSILEGKTAALFGSCCYVGTALGTDNETLKQKAFEYGLNIGMAFQ 201 Query: 223 LADDLLD 229 + DDLLD Sbjct: 202 IVDDLLD 208 >gi|226294533|gb|EEH49953.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides brasiliensis Pb18] Length = 374 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 88/162 (54%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++++ A++AG+ LL A S Sbjct: 116 RLAEITEVIHTASLLHDDV--IDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRA----SV 169 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG---MLGGQMLDIQDEFIDETQV-FMIQK--MKTGA 187 +L+D +L+ ++ N+ ++G L LD ++ F E + + +QK +K+ + Sbjct: 170 ALARLRDPEVIELVATVIANL-IEGEFMQLRNTELDEENPFFTEEAITYYLQKTYLKSAS 228 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + A++ H+S E +G NLG+ FQL DD+LD Sbjct: 229 LISKSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLD 270 >gi|52549424|gb|AAU83273.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured archaeon GZfos27B6] Length = 360 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 7/184 (3%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L L AL IE H +SL HDD+ D+ +RRG+P +H Sbjct: 61 GGKRLRPSLCLMACELVGGEIKKALPTAICIEFFHNFSLAHDDIE--DDSKLRRGEPALH 118 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++Y A+ AG+GL ++E + + + L ++ + + + GQ +D++ Sbjct: 119 VKYGIPIAVNAGDGLYALSYEALKANRNLLGLERAWKIFEEIAELCVV--LSEGQAMDLE 176 Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + + E +V + KT L + + GAI AS E L E++GI FQ+ D Sbjct: 177 FKERKEMGELEVIETLRKKTAKLFGVSAKCGAIAGGASHETAEDLSSAWEDIGIAFQIRD 236 Query: 226 DLLD 229 D+L+ Sbjct: 237 DILN 240 >gi|319639120|ref|ZP_07993876.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102] gi|317399597|gb|EFV80262.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102] Length = 324 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIITILAGKAVGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYVQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|261379260|ref|ZP_05983833.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703] gi|284797691|gb|EFC53038.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703] Length = 324 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIITILAGKAVGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYVQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|297201657|ref|ZP_06919054.1| heptaprenyl diphosphate synthase component II [Streptomyces sviceus ATCC 29083] gi|197710971|gb|EDY55005.1| heptaprenyl diphosphate synthase component II [Streptomyces sviceus ATCC 29083] Length = 336 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVMLAAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVDSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 ++ A++ G+ L A I++ + +R Q + + ++ GQ+L+ Sbjct: 111 TRWGNSVAVLTGDFLFARASHILADLGPE---AVRVQ-------SEAFERLVTGQILETA 160 Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 QD + KTG+L+ +C GA+M+ A + + L +GE LG+ FQLAD Sbjct: 161 GPQDGRDPVEHYLDVLGGKTGSLVAVSCRFGAMMSGADERVVDVLTQYGERLGVAFQLAD 220 Query: 226 DLLDCEED 233 D+LD D Sbjct: 221 DVLDIASD 228 >gi|182677848|ref|YP_001831994.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633731|gb|ACB94505.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 336 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L +++ A++E +H +L+HDD+ +D +RRGK Sbjct: 55 GGKRLRPMLTLAAAGLCGYGGNGHIKLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+++ + + +LS + +G + Q+ + Sbjct: 113 MLWGNEASVLVGDFLLGQAFKMMVEVGS-----LACLEVLSTAAAVIAEGEVM-QLAAAK 166 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT AL A E GA++A + E R +G NLGI FQL DD L Sbjct: 167 DTETGEDDYLAVIRAKTAALFGAAAEVGALLAERPKAEIAACRSYGLNLGIAFQLIDDAL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|225075990|ref|ZP_03719189.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens NRL30031/H210] gi|224952705|gb|EEG33914.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens NRL30031/H210] Length = 324 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIITILAGKAVGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYLQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|312888574|ref|ZP_07748143.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM 18603] gi|311298888|gb|EFQ75988.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM 18603] Length = 323 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 32/196 (16%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IR + ASL + + R A +E +H +L+HDD+ +DN Y RRG +++ Sbjct: 45 GKQIRPMFLFLSASLCGGINESTHRGAALVELLHTATLVHDDV--VDNSYQRRGFFSINA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQGML 160 + A++ G+ LL+ L+LS+ +N ++ M Sbjct: 103 LWKNKIAVLVGDFLLSKG------------------LLLSIENNDFHLLKIVSEAVRQMS 144 Query: 161 GGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 G++L I+ IDE + + + KT +L+ C GA + A E++R FGE + Sbjct: 145 EGELLQIEKVRRMDIDEPVYYDVIRQKTASLIASCCACGAASSGADDATVEKMRLFGEKI 204 Query: 218 GIIFQLADDLLDCEED 233 GI FQ+ DD+ D D Sbjct: 205 GIAFQIKDDMFDFGTD 220 >gi|270295030|ref|ZP_06201231.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317478023|ref|ZP_07937205.1| polyprenyl synthetase [Bacteroides sp. 4_1_36] gi|270274277|gb|EFA20138.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316905812|gb|EFV27584.1| polyprenyl synthetase [Bacteroides sp. 4_1_36] Length = 324 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 14/186 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A LF L A+E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILVLLAAKLFGKVCPATLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166 ++ A++AG+ LL A + R+ ++ + +G Q + G++L + Sbjct: 103 IFNNKVAVLAGDYLLATALVQVGMT--------RNHDIIDIVSCLG-QDLADGELLQLSN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + E F + + KT L ++GA+ AS + E R FGE +G+ FQ+ DD Sbjct: 154 VSNLHFSEEVYFDVIRKKTAVLFAACTKAGALSVGASDEKAESARLFGEYIGLCFQIKDD 213 Query: 227 LLDCEE 232 + D E Sbjct: 214 IFDYSE 219 >gi|134101179|ref|YP_001106840.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291004002|ref|ZP_06561975.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133913802|emb|CAM03915.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 335 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 6/189 (3%) Query: 44 RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 RYALL GK +R ++ A + + A+E +H SL+HDD+ +D RR Sbjct: 39 RYALLSPGKLLRPLMLVASAEAVGGDREAVMPAALAVEYLHAASLVHDDI--IDGDDTRR 96 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G+ +VH +Y AII G+ L+ F ++ D + + +L+ + +G + Sbjct: 97 GRASVHARYGVADAIITGDALIIRLFGSLAECPVPDADVLSAVRILARAGDDLCRGQMRE 156 Query: 163 QML--DIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 +L ++ + +KTGAL AC++GA++ + E + F E+ G+ Sbjct: 157 ALLVPPAPGALGSGLAAYLGMAALKTGALFRGACQAGAVLGGGTPGEVGIVAEFAEHTGL 216 Query: 220 IFQLADDLL 228 FQ+ DDLL Sbjct: 217 AFQMYDDLL 225 >gi|89099928|ref|ZP_01172799.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. NRRL B-14911] gi|89085320|gb|EAR64450.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. NRRL B-14911] Length = 788 Score = 75.5 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 27/237 (11%) Query: 8 KLQENSKRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS----FLV 58 K++E KRI+ +L DLL+ + + A Y+L GGK++R F+ Sbjct: 503 KVEEVQKRINNVLRIEDKDLLM----------GEPVREAANYSLAAGGKRLRPVIAWFVG 552 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 E + + LR ++E +H SLI DDLP+ DN RRGK VH Y A + Sbjct: 553 VEAYGMEETALMPLLR---SLEYMHTASLIFDDLPAQDNAPSRRGKAAVHEVYGTAAAEL 609 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 +G L A E +S + D + + + M GQ +D++ + + + Sbjct: 610 SGLYLTQKAMEDQASLTSSTPDAVLELIRYTARST---AEMCRGQAMDLEAKGKALTAGE 666 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KTG + AI+A A Q+E + L+ F + GI FQ+ DDLLD E D Sbjct: 667 LDALCFYKTGIAFEASIIMPAILAGAEQDEIDVLKKFARHAGIAFQIRDDLLDVEGD 723 >gi|258573655|ref|XP_002541009.1| decaprenyl-diphosphate synthase subunit 1 [Uncinocarpus reesii 1704] gi|237901275|gb|EEP75676.1| decaprenyl-diphosphate synthase subunit 1 [Uncinocarpus reesii 1704] Length = 477 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 88/162 (54%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++++ A++AG+ LL A ++ Sbjct: 219 RLAEITELIHTASLLHDDV--IDNAVTRRSGVSANLEFGNKMAVLAGDFLLGRASVALA- 275 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187 +L+D ++LM ++ N+ ++G QDE + ++ + +QK +K+ + Sbjct: 276 ---RLRDPEVTELMATVIANL-VEGEFMQLRNTAQDERNPAWTEDIITYYLQKTYLKSAS 331 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C S A++ H + + E +G NLG+ FQL DD+LD Sbjct: 332 LISKSCRSAALLGHGAPDVVEAAYSYGRNLGLAFQLVDDMLD 373 >gi|302868180|ref|YP_003836817.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] gi|302571039|gb|ADL47241.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] Length = 339 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 24/233 (10%) Query: 12 NSKRIDTILDDLLLQTASHM--------QTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 S R +DDL + + + D+L + +RYALL GK +R + A Sbjct: 5 GSTRYPPFIDDLARSESGRLLRAELGRRWPETPDQLDAIVRYALLPAGKMLRPMMTLHAA 64 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + L E +H +L+HDD+ +D +RRG+P V + Y AI+AG+ Sbjct: 65 EAVGGSPRDVLAAALGTEYLHVATLVHDDI--IDADTLRRGRPAVPVAYGIPGAIVAGDH 122 Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLS------LTHNIGLQGMLGGQMLDIQDEFIDET 175 L+ +AF+ ++ S + ++ + + L L+ L G LD + E Sbjct: 123 LIFHAFQAMVESGRAVPAASVVAAVTALAEAGQDLCRGQALEARLVGD-LDAGARWYPE- 180 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 MI ++KTG+L C GA++ A L +GE++G FQ+ DDLL Sbjct: 181 ---MI-RLKTGSLFRAVCHIGALLGGADPLVASGLARYGEHVGTAFQIRDDLL 229 >gi|116671675|ref|YP_832608.1| trans-hexaprenyltranstransferase [Arthrobacter sp. FB24] gi|116611784|gb|ABK04508.1| Trans-hexaprenyltranstransferase [Arthrobacter sp. FB24] Length = 367 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 17/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L CA L + + ++ +E H +L HDD+ MD+ RRG PT H Sbjct: 85 GGKRIRPLLALLCAHLGDASRPAVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAH 142 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + A++ G+ + A ++S ++ L R+ L L GQ+ + Sbjct: 143 EVWGNSVAVLTGDLIFARASILVSELGSRALGIQARTFERLCL-----------GQLHET 191 Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 DE V + KTG+L+ + + GAI A A + + L +GE +G+ FQLA Sbjct: 192 VGPRPDEDPVEHYLSVIADKTGSLVAASGQLGAIFAGADEAYEPLLVEYGEKIGVAFQLA 251 Query: 225 DDLLDC 230 DD++D Sbjct: 252 DDVIDV 257 >gi|326793607|ref|YP_004311427.1| trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1] gi|326544371|gb|ADZ89591.1| Trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1] Length = 329 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 115/226 (50%), Gaps = 19/226 (8%) Query: 15 RIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALL--GGKKIRSFLV------TECASL 64 +I ++ D Q ++ +Q L+ I Y ++ GGK++R +V + A Sbjct: 5 KIHDVVADEFSQVNDYILSQLKSEIPLIEQIGYYIISNGGKRMRPLMVLLAARAAQPAQG 64 Query: 65 FNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + L+ +++ + IE IH +L+HDD+ +D +RRGK T + ++ +++ G+ L Sbjct: 65 LSETQLSHTVKMASIIEFIHTATLLHDDV--VDESDMRRGKKTANEEWGNAPSVLVGDFL 122 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + AF+I+ + + + +LS T NI +G + Q+++ D E + + Sbjct: 123 YSRAFQIMVNVGS-----VPCMEILSNTTNIISEGEVQ-QLINCGDPDTSEESYLKVIQY 176 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L A GA++A AS+ ++ L+ +G +G FQL DD++D Sbjct: 177 KTAKLFEGAALCGAVVAGASEEHQKALQAYGMYVGTAFQLVDDVMD 222 >gi|255010272|ref|ZP_05282398.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12] gi|313148068|ref|ZP_07810261.1| octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12] gi|313136835|gb|EFR54195.1| octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12] Length = 324 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 14/186 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A L+ L ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILVLLVAKLYGEIKPATLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166 ++ A++ G+ LL A ++ + +T R+ ++ + +G Q + G++L + Sbjct: 103 IFNNKVAVLVGDFLL--ATSLVHAERT------RNHDIIGVVACLG-QDLAEGEILQLSN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + ET F + + KT AL ++ A+ + + E R FGEN+GI FQ+ DD Sbjct: 154 VSNREYSETIYFDVIRKKTAALFAACTKAAALSVEITDEKAEFARLFGENIGICFQIKDD 213 Query: 227 LLDCEE 232 + D E Sbjct: 214 IFDYFE 219 >gi|325918710|ref|ZP_08180807.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325918918|ref|ZP_08180989.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325534852|gb|EGD06777.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325535077|gb|EGD06976.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC 35937] Length = 332 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + A + ++RL +G LG FQ+ADD+L Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGADADVQQRLYDYGMQLGFAFQIADDVL 224 Query: 229 DC---EEDLPK 236 D EDL K Sbjct: 225 DYAAEAEDLGK 235 >gi|240950200|ref|ZP_04754487.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305] gi|240295287|gb|EER46073.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305] Length = 327 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLITVLAARALGYQGAKQITTAAFIEFVHTATLLHDDV--VDESDMRRGRETAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S D++ ++S N +G + Q++++ Sbjct: 105 AAFGNAASVLVGDYIYTRSFQMMTSV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+A+AS+ + L+ +G LG FQL DD+L Sbjct: 159 DPNTTEENYMRVIYNKTARLFEAATQCVAIVANASKEIEIALKNYGCYLGTAFQLVDDIL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|21226891|ref|NP_632813.1| farnesyltranstransferase [Methanosarcina mazei Go1] gi|20905197|gb|AAM30485.1| Geranyltranstransferase [Methanosarcina mazei Go1] Length = 295 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 18/185 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR ++ + + + ++ +L A+E +H SLIHDDL +D G +RR P+ Sbjct: 49 GGKRIRPIILLLVSEICSGSYSRSLNAALAVEMMHSASLIHDDL--LDQGLVRRNLPSAP 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM--LGGQMLD 166 ++ A++ G+ L+ + IS P + + + G GM G++LD Sbjct: 107 EKFGPSGALLCGDYLIAKSIAFIS-PYGE-----------KVIQDFGKAGMDMAEGEVLD 154 Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + +DE E F KT +L + GA A + ER FG LG +Q+ Sbjct: 155 LKLEDESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIV 214 Query: 225 DDLLD 229 DD+L+ Sbjct: 215 DDILE 219 >gi|319956645|ref|YP_004167908.1| polyprenyl synthetase [Nitratifractor salsuginis DSM 16511] gi|319419049|gb|ADV46159.1| Polyprenyl synthetase [Nitratifractor salsuginis DSM 16511] Length = 298 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 18/185 (9%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GK++R+ L+ A + L+A++ A +E IH SL+HDD+ +D+ Y RRG+P+ Sbjct: 28 LPAGKRLRARLILTIAG----SGLSAVKTAAIVEMIHAASLLHDDV--IDDAYTRRGRPS 81 Query: 107 VHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 ++ Y T+I+ G+ L + AF E++ +I Q+ S+ + + L + Q + Sbjct: 82 INALYGNKTSIMFGDVLYSKAFYELV---------DIDRQVARSIANAVVLLSLGERQDV 132 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + + F + ++ KM + A + ++E R +G NLGI FQ+ D Sbjct: 133 LLSESFNPDRDAYL--KMIYQKTAALIEAAAESAAILAGKDREAYRTYGRNLGIAFQMID 190 Query: 226 DLLDC 230 D+LD Sbjct: 191 DILDI 195 >gi|73667942|ref|YP_303957.1| polyprenyl synthetase [Methanosarcina barkeri str. Fusaro] gi|72395104|gb|AAZ69377.1| polyprenyl synthetase [Methanosarcina barkeri str. Fusaro] Length = 285 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 20/186 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR ++ + + + ++ +L AIE +H SLIHDDL +D G +RR P+ Sbjct: 39 GGKRIRPIILLLSSEICSGSYQQSLNAALAIELMHSASLIHDDL--LDQGLVRRNLPSAP 96 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--MLGGQMLD 166 ++ A++ G+ L+ FE I SP + + + G G M G++LD Sbjct: 97 EKFGPSRALLCGDYLIAKCFEFI-SPYGE-----------KVVRDFGKAGMDMAEGEVLD 144 Query: 167 I---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + +D F E F KT +L + GA A + ER FG LG +Q+ Sbjct: 145 LRLDKDNF-GENNYFECIYKKTASLFAISASIGAYTGGADEVLAERFNFFGNCLGTAYQI 203 Query: 224 ADDLLD 229 DD+L+ Sbjct: 204 VDDILE 209 >gi|308070091|ref|YP_003871696.1| geranyltranstransferase [Paenibacillus polymyxa E681] gi|305859370|gb|ADM71158.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Paenibacillus polymyxa E681] Length = 792 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 10/226 (4%) Query: 16 IDTILDDLLLQ---TASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHL 70 ++T+ D + Q T H ++L+ A Y+L G GK+IR L + + ++ Sbjct: 506 VETVRDQINNQLKITKPHGIEAMKEQLIDAANYSLEGDGKRIRPILTWVMGVNEYGLDAS 565 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + + ++E +H SLI DDLPS DN RRG+ T+H ++ TA + G L+ A Sbjct: 566 AIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRQTLHKVHNSATAELTGLYLIQKA--- 622 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGAL 188 I + + N + L L + M GQ +D+ + + + Q+ M+ KTG Sbjct: 623 IGEQSSLSQFNAETVLALIQYSAQKAEDMCMGQAMDLDSKGKALTLEQLNMMCFYKTGVA 682 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 A++A A + E L+ F ++GI FQ+ DDLLD E D+ Sbjct: 683 FEACLVMPAMLAQAEEPEIAALQKFAYHMGIAFQIKDDLLDVEGDM 728 >gi|167856324|ref|ZP_02479054.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755] gi|167852554|gb|EDS23838.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755] Length = 327 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLIAVLAANTVGYKGQEHITCAAFVEFIHTATLLHDDV--VDESDMRRGRETAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++S ++ + ++S N+ +G + Q++++ Sbjct: 105 ARFGNAASVLVGDFIYTRAFQMMASLRS-----LDVLQVMSDATNVIAEGEVQ-QLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI++ A Q +R +G LG FQL DD+L Sbjct: 159 DPETTEANYMQVIYSKTARLFEAASQCSAIVSGADQATVIAMRDYGRYLGTAFQLVDDIL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|329937106|ref|ZP_08286735.1| polyprenyl synthatase [Streptomyces griseoaurantiacus M045] gi|329303713|gb|EGG47598.1| polyprenyl synthatase [Streptomyces griseoaurantiacus M045] Length = 357 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 66 GGKAVRPALALLSAQAAGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 123 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T ++ ++ + S T + ++ GQ DI Sbjct: 124 KVHGPAQAILVGDALFALAGEVLLELGT-VEAGRAARRLTSAT-----RALIDGQAQDIS 177 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ AC GA++ A + L +G +LG+ FQ D Sbjct: 178 YEHRDRVSVEECLEMEGNKTGALLACACSIGAVLGGADDEVADTLETYGHHLGLAFQAVD 237 Query: 226 DLL 228 DLL Sbjct: 238 DLL 240 >gi|309753137|gb|ADO85593.1| PenB [Streptomyces exfoliatus] Length = 337 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 11/187 (5%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A AL A+E +H +SL+HDDL MD RR + TV Sbjct: 53 GKAVRPALALLSAEAVGAPPEVALPGAVAVELVHNFSLVHDDL--MDGDEERRHRRTVWK 110 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + +AI+ G+ LL A E++ L + + + + ++ GQ+ D+ Sbjct: 111 LWGSSSAILTGDALLALAQEVL------LDTGLPTAAPAARLLARTTRHLIRGQVQDLAF 164 Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 Q + + + KTGAL+ + GA++A A + + L +G+ +G+ FQL DD Sbjct: 165 EQRSHVTVEECVDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDD 224 Query: 227 LLDCEED 233 +L D Sbjct: 225 VLGIWGD 231 >gi|229160564|ref|ZP_04288559.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus R309803] gi|228622974|gb|EEK79805.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus R309803] Length = 320 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 103/195 (52%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ + A+ G+ L + E +++ + + +L+H I + G++ I Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECVTNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI + A++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIASGANRETVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|227544097|ref|ZP_03974146.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri CF48-3A] gi|300909796|ref|ZP_07127257.1| polyprenyl synthetase [Lactobacillus reuteri SD2112] gi|227185930|gb|EEI66001.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri CF48-3A] gi|300893661|gb|EFK87020.1| polyprenyl synthetase [Lactobacillus reuteri SD2112] Length = 326 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 28/197 (14%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK +R A N+NH TA +++ +++E +H +LIHDD+ +D+ RR Sbjct: 45 GGKYLRPAFFLLFA---NINHQTADEQERLIKIASSLEVLHMATLIHDDI--IDDSPKRR 99 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT---QLKDNIRSQLMLSLTHNIGLQGM 159 G +V + + TA+ G+ L T F+++ T L N R+ ++ + Sbjct: 100 GAVSVQSAFGKDTAVYTGDFLFTIFFDLLVETMTGSPYLTRNART-----------MRKI 148 Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 L G++ + + F +D++ + + + KT A+ A E GA H+ + + G+N Sbjct: 149 LTGELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLAAEEGAYFGHSDRRTINLAKRIGQN 208 Query: 217 LGIIFQLADDLLDCEED 233 +GI FQ+ DD+LD D Sbjct: 209 IGISFQILDDILDYSGD 225 >gi|49083716|gb|AAT51120.1| PA4569 [synthetic construct] Length = 323 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLAGKTLGYKGDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L +FE++ + I SQ + LQ + ++ Sbjct: 101 ALWGNAPSVLVGDFLYARSFEMMVELGSMPVMRIISQATRVIAEGEVLQ------LSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + A + + E LR FG+ LGI FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|269955291|ref|YP_003325080.1| polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269303972|gb|ACZ29522.1| Polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 343 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 19/199 (9%) Query: 37 DRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 DRL + + L+ GGK++R FL L + + +E H SL HDD+ Sbjct: 45 DRLADDVAHHLVAAGGKRLRPFLTLLAGELGDGARTELVDAAVVVELTHLASLYHDDV-- 102 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLT 151 MD+ +RRG P+VH + AI+ G+ L A ++ P+ +L+ +L L Sbjct: 103 MDSAPLRRGAPSVHSVWGNSVAILVGDLLFARASARVAGLGPEAVRLQAETFERLCLGQL 162 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERL 210 H G G+ D Q ++ + KT +L+ + GA+ A + E + Sbjct: 163 HET--TGPAEGE---------DPAQHYLQVLADKTASLLATSARLGAMFGGAPAEQVEVV 211 Query: 211 RCFGENLGIIFQLADDLLD 229 +GE +G+ FQ+ADD+LD Sbjct: 212 AAYGEKVGVAFQIADDVLD 230 >gi|72163080|ref|YP_290737.1| trans-hexaprenyltranstransferase [Thermobifida fusca YX] gi|71916812|gb|AAZ56714.1| trans-hexaprenyltranstransferase [Thermobifida fusca YX] Length = 334 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D LL + ASH LL A GGK+ R+ LV A + + + A +E Sbjct: 42 DPLLREAASH--------LLEA------GGKRFRAILVLLSARFGDATNPDLVSAAAVVE 87 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 H +L HDD+ MD +RRG P+ + ++ AI+ G+ + A EI++ T+ Sbjct: 88 LTHVATLYHDDV--MDEAELRRGSPSANRRWGNTIAILTGDYVFARASEILADLGTEAV- 144 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 +++Q L L+ +D ++D + KT +L+ + GA++ Sbjct: 145 RLQAQTFGRLVRGQILETAGPRPGVDPMKHYLD------VIADKTASLIASSARFGAMVG 198 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230 +A E L G+ LG+ FQL+DD+LD Sbjct: 199 NADPEVVETLTRAGDALGMAFQLSDDILDV 228 >gi|56963654|ref|YP_175385.1| heptaprenyl diphosphate synthase component II [Bacillus clausii KSM-K16] gi|56909897|dbj|BAD64424.1| heptaprenyl diphosphate synthase component II [Bacillus clausii KSM-K16] Length = 323 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR LV A F L L+ + +E IH SL+HDD+ +DN +RRG+ TV Sbjct: 43 GGKRIRPVLVL-LAGKFGDYQLDRLKHIAVTLELIHMGSLVHDDV--IDNAPLRRGRETV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++D A+ G+ + +A E + + I S +M + G++ I Sbjct: 100 MSRWDNRVAMYTGDYIFGHAIETTKAFSDKRVHTIISDVMNQICR---------GEIEQI 150 Query: 168 QDEF-IDET-QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++++ + K KT L+ +C+ GAI++ A+ ++ L F LG+ +Q+ Sbjct: 151 RDQYNWDQGLRIYLRRIKRKTALLIAVSCQLGAIVSGATDELQKNLYYFAYFLGMSYQIM 210 Query: 225 DDLLD 229 DD+LD Sbjct: 211 DDILD 215 >gi|241760794|ref|ZP_04758885.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114] gi|241318691|gb|EER55243.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114] Length = 324 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIITILAGKAVGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYVQVIQYKTAKLFEAAAQVGAILGKASTEHEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|261401641|ref|ZP_05987766.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970] gi|313667728|ref|YP_004048012.1| octaprenyl-diphosphate synthase [Neisseria lactamica ST-640] gi|269208281|gb|EEZ74736.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970] gi|313005190|emb|CBN86623.1| octaprenyl-diphosphate synthase [Neisseria lactamica 020-06] Length = 324 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGRSVGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ AS ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|325919582|ref|ZP_08181594.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC 19865] gi|325549918|gb|EGD20760.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC 19865] Length = 358 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + ++ A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 79 GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIVEFIHTSTLLHDDV--VDESDLRRGRSTAN 136 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L Q++ T+ I +L Q+L + Sbjct: 137 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 190 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + A + ++RL +G LG FQ+ADD+L Sbjct: 191 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGADAHVQQRLYDYGMQLGFAFQIADDVL 250 Query: 229 DCEED 233 D D Sbjct: 251 DYAAD 255 >gi|297617504|ref|YP_003702663.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297145341|gb|ADI02098.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 345 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 14/183 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV L + V A+ECIH SLIHDD+ +D +RRG PT++ Sbjct: 37 GKMLRPRLVLLSRGLLGPIEDLTVDVAVAVECIHNASLIHDDI--IDAAVLRRGAPTINH 94 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LD 166 Y A++ G+ AF +++ + N++ +M L+ I Q M G++ L+ Sbjct: 95 LYGPKIAVLVGDHYFAAAFGLLT------RHNLK-HIMRELSDAI--QDMCKGEIYQDLN 145 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + +I E + KT +L AC G + S E + FG LG +Q+ADD Sbjct: 146 LFNPYITEDDYWTSIFGKTASLFSAACRCGVMAGGGSAREVYLMGKFGRELGYAYQVADD 205 Query: 227 LLD 229 + D Sbjct: 206 IND 208 >gi|257465194|ref|ZP_05629565.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202] gi|257450854|gb|EEV24897.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202] Length = 327 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLITVLAARALGYQGAKQITTAAFIEFVHTATLLHDDV--VDESDMRRGRETAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S D++ ++S N +G + Q++++ Sbjct: 105 AAFGNAASVLVGDYIYTRSFQMMTSV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+A+AS+ + L+ +G LG FQL DD+L Sbjct: 159 DPNTTEENYMRVIYNKTARLFEAATQCVAIVANASKEIEIALKNYGCYLGTAFQLVDDIL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|145596562|ref|YP_001160859.1| polyprenyl synthetase [Salinispora tropica CNB-440] gi|145305899|gb|ABP56481.1| Polyprenyl synthetase [Salinispora tropica CNB-440] Length = 356 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG P+ + Sbjct: 74 GGKRFRPLLVALGAQFGDPTREQVVPAAVVVELTHLATLYHDDV--MDEAPVRRGAPSAN 131 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 ++ AI+ G+ L A +I + T+ ++++ L H GQ+ + Sbjct: 132 SRWTNSVAILVGDYLFARAADISADLGTEAV-RLQARTFARLVH---------GQIAETV 181 Query: 168 -QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D + + KTG+L+ A G + + AS + L +GE +G+ FQL+D Sbjct: 182 GPRPGVDPVAHHLHVIAEKTGSLIATAARFGGMFSGASPTHTQALAGYGEAIGVAFQLSD 241 Query: 226 DLLDCEED 233 DLLD + Sbjct: 242 DLLDISSE 249 >gi|194467708|ref|ZP_03073695.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23] gi|194454744|gb|EDX43641.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23] Length = 326 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 28/197 (14%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK +R A N+NH TA +++ +++E +H +LIHDD+ +D+ RR Sbjct: 45 GGKYLRPAFFLLFA---NINHQTAAEQEKLIKIASSLEVLHMATLIHDDI--IDDSPKRR 99 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT---QLKDNIRSQLMLSLTHNIGLQGM 159 G +V + + TA+ G+ L T F+++ T L N R+ ++ + Sbjct: 100 GAVSVQAAFGKDTAVYTGDFLFTIFFDLLVETMTGSPYLTRNART-----------MRKI 148 Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 L G++ + + F +D++ + + + KT A+ A E GA H + + G+N Sbjct: 149 LTGELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLAAEEGAYFGHGDRRTINLAKRIGQN 208 Query: 217 LGIIFQLADDLLDCEED 233 +GI FQ+ DD+LD D Sbjct: 209 IGISFQILDDILDYSGD 225 >gi|328466279|gb|EGF37436.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes 1816] Length = 312 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD+ +DN +RRG+ T+ Sbjct: 35 GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETI 92 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 93 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 143 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 144 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 203 Query: 225 DDLLD 229 DD+LD Sbjct: 204 DDVLD 208 >gi|283457457|ref|YP_003362034.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18] gi|283133449|dbj|BAI64214.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18] Length = 353 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 20/221 (9%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74 RI+ L + + QT H+ + LLSA GGK++R L A++ + + Sbjct: 44 RIEERLGEAIAQT-DHLADVASRHLLSA------GGKRVRPLLALLSAAVDGEINDEVIE 96 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +E H +L HDD+ MD+ RRG + + + AI+ G+ + + A ++S Sbjct: 97 AAVVVELTHLATLYHDDV--MDDAPKRRGVDSAQMIWGNSVAILTGDLIFSRASLLVSEL 154 Query: 135 KTQLKDNIRSQLM--LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 T+ I+SQ L L G GQ D+ D +I + + KTG+L+ A Sbjct: 155 GTRPM-KIQSQTFERLVLGQLFETTGPREGQ--DLLDHYI------AVIEGKTGSLIAAA 205 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 E G++++ AS+ ++ +GE +G+ FQLADD++D D Sbjct: 206 GEYGSLLSGASEEVISMVKAYGELVGVAFQLADDVIDIVSD 246 >gi|47094453|ref|ZP_00232133.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes str. 4b H7858] gi|226224534|ref|YP_002758641.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes Clip81459] gi|254825575|ref|ZP_05230576.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL J1-194] gi|254852833|ref|ZP_05242181.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL R2-503] gi|254993471|ref|ZP_05275661.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes FSL J2-064] gi|255521040|ref|ZP_05388277.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes FSL J1-175] gi|300763760|ref|ZP_07073757.1| heptaprenyl diphosphate syntase component II [Listeria monocytogenes FSL N1-017] gi|47017168|gb|EAL08021.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes str. 4b H7858] gi|225876996|emb|CAS05705.1| Putative heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606162|gb|EEW18770.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL R2-503] gi|293594818|gb|EFG02579.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL J1-194] gi|300515496|gb|EFK42546.1| heptaprenyl diphosphate syntase component II [Listeria monocytogenes FSL N1-017] Length = 321 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD+ +DN +RRG+ T+ Sbjct: 44 GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 212 Query: 225 DDLLD 229 DD+LD Sbjct: 213 DDVLD 217 >gi|46908163|ref|YP_014552.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes serotype 4b str. F2365] gi|254931899|ref|ZP_05265258.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262] gi|46881433|gb|AAT04729.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes serotype 4b str. F2365] gi|293583451|gb|EFF95483.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262] gi|328472773|gb|EGF43622.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes 220] Length = 321 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD+ +DN +RRG+ T+ Sbjct: 44 GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 212 Query: 225 DDLLD 229 DD+LD Sbjct: 213 DDVLD 217 >gi|21225056|ref|NP_630835.1| polyprenyl synthatase [Streptomyces coelicolor A3(2)] gi|4539167|emb|CAB39696.1| putative polyprenyl synthatase [Streptomyces coelicolor A3(2)] Length = 378 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + A+E +H +SL+HDDL MD RR + TV Sbjct: 87 GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 144 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T +L + + ++ GQ DI Sbjct: 145 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKAS------RSLIDGQAQDIS 198 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + + L +G +LG+ FQ D Sbjct: 199 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVD 258 Query: 226 DLL 228 DLL Sbjct: 259 DLL 261 >gi|258514531|ref|YP_003190753.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM 771] gi|257778236|gb|ACV62130.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM 771] Length = 323 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 17/222 (7%) Query: 14 KRIDTILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHL 70 K + I DDL +++ + Q D LL+ LL GGK++R +N + Sbjct: 6 KLFNEIKDDLKIVEQELYQVVQTPDALLTETSVHLLNAGGKRLRPAFCLLGGKFYNYDIK 65 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 L + A+E IH SL+HDD+ +D RRG PTV ++ ++ G+ L + + Sbjct: 66 KLLPLAVALELIHMASLVHDDV--VDASMTRRGMPTVKAKWGNRISVHVGDYLFAKSLIL 123 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDE--TQVFMIQKMKTGA 187 ISS K L + S + ++ G++ I F +++ F K KT Sbjct: 124 ISSYKEPLITRVLSDTSVKMSE---------GEIQQISTSFNVNQYLKDYFYRIKRKTAL 174 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C+ GA+ A + L +G +G+ FQ+ DD+LD Sbjct: 175 LISASCQLGAVACGAPKEIYLPLNRYGHYIGMAFQITDDILD 216 >gi|261342632|ref|ZP_05970490.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC 35316] gi|288315280|gb|EFC54218.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC 35316] Length = 323 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAILAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+ + +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQCSGILGGCTDVQEKGLQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|149371556|ref|ZP_01890972.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49] gi|149355183|gb|EDM43743.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49] Length = 325 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 36/195 (18%) Query: 50 GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R FL+ + NVN T R + IE IH +L+HDD+ +D+ RRG + Sbjct: 45 GKQMRPMFVFLIAKMCDEGNVNERT-YRGASVIELIHTATLVHDDV--VDDSNRRRGFFS 101 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH---------NIGLQ 157 ++ + A++ G+ LL+ L+LS+ H ++ ++ Sbjct: 102 INALWKNKIAVLVGDYLLSKG------------------LLLSIDHGDFDLLKIISVAVR 143 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M G++L I+ I E F I + KT L+ C GA +AS+ + E +R FG Sbjct: 144 EMSEGELLQIEKARRLDITEEIYFEIIRQKTATLIAACCAMGAKSVNASEGQVENMRAFG 203 Query: 215 ENLGIIFQLADDLLD 229 E +G FQ+ DDL D Sbjct: 204 ELIGTAFQIKDDLFD 218 >gi|310643237|ref|YP_003947995.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Paenibacillus polymyxa SC2] gi|309248187|gb|ADO57754.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) [Paenibacillus polymyxa SC2] Length = 795 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 7/201 (3%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 ++L+ A Y+L G GK+IR L + + ++ L + + ++E +H SLI DDLPS Sbjct: 533 EQLIDAANYSLEGDGKRIRPILTWVMGVNEYGLDALAIVPLLRSLEYMHTASLIFDDLPS 592 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 DN RRG+ T+H ++ TA + G L+ A I + + N + L L Sbjct: 593 QDNASTRRGRQTLHQVHNSATAELTGLYLIQKA---IGEQASLSQFNAETVLALIQYSAR 649 Query: 155 GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 + M GQ +D+ + + + Q+ M+ KTG A++A ++E L+ Sbjct: 650 KAEDMCMGQAMDLDSKGKALTLEQLNMMCFYKTGVAFEACLVMPAMLAQTEESEIAALQK 709 Query: 213 FGENLGIIFQLADDLLDCEED 233 F ++GI FQ+ DDLLD E D Sbjct: 710 FAYHMGIAFQIKDDLLDVEGD 730 >gi|300711100|ref|YP_003736914.1| Dimethylallyltranstransferase [Halalkalicoccus jeotgali B3] gi|299124783|gb|ADJ15122.1| Dimethylallyltranstransferase [Halalkalicoccus jeotgali B3] Length = 347 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 26/213 (12%) Query: 37 DRLLSAIRYAL-LGGKKIR-SFLVTECASLFNVNHLTA---------------LRVGAAI 79 +RL A RY L GGK++R + L+ +L +V L+ LR +I Sbjct: 34 ERLYEASRYLLDAGGKRLRPAVLLLTAEALCDVAPLSTDYREFPTLDGDTVDVLRAAVSI 93 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E I ++LIH MD+ +RRG P+VH +YD TAI+AG+ L + AFEI+ Sbjct: 94 ETIQSFTLIH--DDIMDDDDLRRGVPSVHREYDLETAILAGDTLYSKAFEIMLESGAHPG 151 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESG 196 ++++ L+ T + GQ LD++ E + E++ + ++KT L A Sbjct: 152 RSLKALRTLAST----CTRICEGQSLDVEFERREDVSESEYLEMIELKTAVLYGSATSVP 207 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + A E L +G ++G FQ+ DD+LD Sbjct: 208 ADLLGADDRTVEALYRYGIDIGKAFQIQDDVLD 240 >gi|228914189|ref|ZP_04077805.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845393|gb|EEM90428.1| Heptaprenyl diphosphate synthase component 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 305 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D ++RRG TV Sbjct: 28 GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 84 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLD 166 + ++ + A+ G+ L + E I+ NI + +L+H I + G++ Sbjct: 85 NAKWGDRIAMYTGDYLFAKSLECIT--------NIEIPEAHQALSHTI--LEVCKGEIEQ 134 Query: 167 IQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+D++ D+ ++ K KT L+ +C+ GAI A A+ + RL +G +G+ +Q+ Sbjct: 135 IKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANCDTVSRLFWYGYFVGMSYQI 194 Query: 224 ADDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 195 IDDILDFVSTEEKLGK 210 >gi|15599765|ref|NP_253259.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1] gi|107099768|ref|ZP_01363686.1| hypothetical protein PaerPA_01000786 [Pseudomonas aeruginosa PACS2] gi|116052711|ref|YP_793028.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|218893664|ref|YP_002442533.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58] gi|254238683|ref|ZP_04932006.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719] gi|254244534|ref|ZP_04937856.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192] gi|296391383|ref|ZP_06880858.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAb1] gi|313107214|ref|ZP_07793413.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016] gi|9950815|gb|AAG07957.1|AE004870_8 octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1] gi|115587932|gb|ABJ13947.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|126170614|gb|EAZ56125.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719] gi|126197912|gb|EAZ61975.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192] gi|218773892|emb|CAW29706.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58] gi|310879915|gb|EFQ38509.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016] Length = 322 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLAGKTLGYKGDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L +FE++ + I SQ + LQ + ++ Sbjct: 101 ALWGNAPSVLVGDFLYARSFEMMVELGSMPVMRIISQATRVIAEGEVLQ------LSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + A + + E LR FG+ LGI FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|152975037|ref|YP_001374554.1| heptaprenyl diphosphate synthase component II [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023789|gb|ABS21559.1| Heptaprenyl diphosphate synthase component II [Bacillus cytotoxicus NVH 391-98] Length = 320 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A F L A++ V A+E IH SL+HDD+ +D +RRG TV Sbjct: 43 GGKRIRPVFVL-LAGKFGEYKLDAIKHVAVALELIHMASLVHDDV--IDAALLRRGSATV 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + + A+ G+ L + E I++ + S +L + G++ I Sbjct: 100 NANWGDRIAMYTGDYLFAKSLECITNLEVPEAHQALSYTILEVCK---------GEIEQI 150 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D+ ++ K KT L+ +C+ GAI + AS++ RL +G +G+ +Q+ Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIASGASRDTVNRLFWYGYFVGMSYQII 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 211 DDILDFVSTEEKLGK 225 >gi|10801552|dbj|BAB16689.1| GGPP synthase [Eucommia ulmoides] Length = 127 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 74/127 (58%), Gaps = 3/127 (2%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H+ + E A++AG+ LL +AFE+I++ T + + +++ L +IG Sbjct: 1 NDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTGVPADRIVRVIGELAKSIGS 60 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E + + + I KT AL+ + GAI+ A+ E E+LR F Sbjct: 61 EGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEGSVVLGAILGGATDPEVEKLRKF 120 Query: 214 GENLGII 220 +G + Sbjct: 121 ARCIGFL 127 >gi|85708095|ref|ZP_01039161.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1] gi|85689629|gb|EAQ29632.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1] Length = 336 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L ++ AA+E IH +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAGAALVGYEGTRHHKLAAAVEFIHTATLLHDDV--VDGSELRRGKAAAN 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + ++ G+ L + AFE+++ ++R +LS + +G + Q Sbjct: 113 IVFGNPATVLVGDFLFSRAFELMTE-----DGSLRVLKILSHASAVIAEGEVSQLTAQRQ 167 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E +E + +I AL A + A++A S E+ L +G NLG+ FQL DD + Sbjct: 168 IETSEERYLHIIGAKTA-ALFAAASQISAVVAECSDEEERALEDYGRNLGVAFQLVDDAI 226 Query: 229 DCEED 233 D + D Sbjct: 227 DYDSD 231 >gi|320531898|ref|ZP_08032809.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337] gi|320135889|gb|EFW27926.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337] Length = 368 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 40/250 (16%) Query: 1 MNGGLPSKLQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57 M G LP E RI L +D L++ + N A GGK++R L Sbjct: 1 MIGSLPLSAPELESRIIPALQTIEDRLMEVVTSADETINP---PTSHLAEAGGKRLRPVL 57 Query: 58 VTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 A L + T ++ G A+E H +L HDD+ MD +RRG P+ + Sbjct: 58 ALLTAQLGDPALATGEQIRDAGVAVELTHIATLYHDDV--MDEAPLRRGAPSAQTVWGNS 115 Query: 115 TAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-------- 164 AI+ G+ L+ A ++++ SP+ + H + + GQ+ Sbjct: 116 AAILTGDVLVARASQLVAALSPEA------------VMAHAKTFERLCMGQLHETLPRPS 163 Query: 165 -LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D D +I QV KTG+L+ + GA++ A ++ + FGE +G+ FQL Sbjct: 164 GTDPVDHYI---QVL---ADKTGSLIAVSARYGAMLTDAGVRTEQIVEEFGERIGVAFQL 217 Query: 224 ADDLLDCEED 233 ADD++D D Sbjct: 218 ADDVIDLMSD 227 >gi|312795082|ref|YP_004028004.1| farnesyl pyrophosphate synthetase / Geranyltranstransferase / farnesyltransferase / Octaprenyl diphosphate synthase [Burkholderia rhizoxinica HKI 454] gi|312166857|emb|CBW73860.1| Farnesyl pyrophosphate synthetase (EC 2.5.1.1) / Geranyltranstransferase (EC 2.5.1.10) / Farnesyltransferase (EC 2.5.1.29) / Octaprenyl diphosphate synthase (EC 2.5.1.-) [Burkholderia rhizoxinica HKI 454] Length = 352 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A+ + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 73 GGKRLRPALLLLVANALGERSGQRHELAAVIEFIHTATLLHDDV--VDESQLRRGKQTAN 130 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ + DN+R +LS N+ +G + Q+L++ Sbjct: 131 ALFGNAASVLVGDFLYSRAFQMMVA-----CDNLRVMQILSDATNVIAEGEVL-QLLNMH 184 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +D+ + + + KT L A + GA++A A + FG +G FQ+ DD L Sbjct: 185 DPDVDQARYMQVIRYKTAKLFEAAAQLGAVIAGAPPALEAAAAEFGRTIGTAFQIMDDWL 244 Query: 229 D 229 D Sbjct: 245 D 245 >gi|298244906|ref|ZP_06968712.1| Trans-hexaprenyltranstransferase [Ktedonobacter racemifer DSM 44963] gi|297552387|gb|EFH86252.1| Trans-hexaprenyltranstransferase [Ktedonobacter racemifer DSM 44963] Length = 329 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 8/184 (4%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R+ L L L + A E H +LIHDD+ +D RRG PTV+ Sbjct: 48 GKRLRTALTLLAGKLNTYRFEKLLLLSVAFEMTHLATLIHDDI--VDESSTRRGNPTVNA 105 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + + AI+ G+ +I+ + D++ S + ++ L+ M G + ++ Sbjct: 106 LFGDKIAILLGDYYFAKTAGLIADIEDPRIDHLFSDTVATVCEGTILEMMTAGNIDLSKE 165 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + ++T + KT LM + GAI++ A+ E E L +G +LG FQ+ DD+LD Sbjct: 166 TYYEKT------RSKTACLMAACSKGGAIISGATPEEIELLYAYGMHLGTAFQIIDDILD 219 Query: 230 CEED 233 +D Sbjct: 220 YTQD 223 >gi|289767672|ref|ZP_06527050.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|289697871|gb|EFD65300.1| polyprenyl synthetase [Streptomyces lividans TK24] Length = 354 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + A+E +H +SL+HDDL MD RR + TV Sbjct: 63 GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 120 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T +L + + ++ GQ DI Sbjct: 121 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKAS------RSLIDGQAQDIS 174 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + + L +G +LG+ FQ D Sbjct: 175 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVD 234 Query: 226 DLL 228 DLL Sbjct: 235 DLL 237 >gi|332312370|gb|EGJ25465.1| Trans-hexaprenyltranstransferase [Listeria monocytogenes str. Scott A] Length = 324 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD+ +DN +RRG+ T+ Sbjct: 47 GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETI 104 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 105 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 155 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 156 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|160900919|ref|YP_001566501.1| polyprenyl synthetase [Delftia acidovorans SPH-1] gi|160366503|gb|ABX38116.1| Polyprenyl synthetase [Delftia acidovorans SPH-1] Length = 359 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + + A +E IH +L+HDD+ +D +RRG+PT + Sbjct: 80 GGKRLRPALLLMVCNALGYEGRDRHVLAAVVELIHTATLLHDDV--VDESTLRRGRPTAN 137 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ ++R +LS N+ +G + Q+++ Sbjct: 138 ETFGNPASVLVGDFLHSRSFQMMVE-----VGSMRVLKILSDATNVIAEGEVQ-QLINTH 191 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + KT L + + GA++A A + ++ +G+ LG FQ+ DD+L Sbjct: 192 DASLDEAGYLHVIRSKTAQLFEASAQLGAVLADAPREIEQACAIYGQALGTAFQIIDDVL 251 Query: 229 DCEED 233 D D Sbjct: 252 DYTGD 256 >gi|146308698|ref|YP_001189163.1| polyprenyl synthetase [Pseudomonas mendocina ymp] gi|145576899|gb|ABP86431.1| Polyprenyl synthetase [Pseudomonas mendocina ymp] Length = 322 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + A IE +H +L+HDD+ M + +RRG+ T + Sbjct: 43 GGKRLRPLLVLLSGRALGYQADDLRLLAATIEFLHTATLLHDDVVDMSD--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Q+ +++ G+ L + +FE++ +L +++ T I +L Q+ ++ Sbjct: 101 AQWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMKILSHATRVIAEGEVL--QLSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A +A A++ ++E LR FG++LGI FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALAGANEAQREALRTFGDHLGIAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYKGD 219 >gi|226951590|ref|ZP_03822054.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) [Acinetobacter sp. ATCC 27244] gi|294651249|ref|ZP_06728577.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC 19194] gi|226837665|gb|EEH70048.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) [Acinetobacter sp. ATCC 27244] gi|292822902|gb|EFF81777.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC 19194] Length = 347 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 24/193 (12%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L L N+ A + A IE +H +L+HDD+ +D +RRG+P Sbjct: 68 GGKRMRPIMCLLAARACGLTNMQQ--AQHLAAVIEMLHTATLVHDDV--VDESNLRRGRP 123 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 T + ++ TA++ G+ L+ AF+++ + T LKD + G + G+ Sbjct: 124 TANATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGE 172 Query: 164 MLDIQDEFIDET--QVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 +L +Q + +T ++++ I KT L A E AI+A ++ +E LR F + G Sbjct: 173 VLQLQSQHQPDTTEEIYLNIIHGKTSRLFELATEGAAILA-GTEEYREPLRRFAGHFGNA 231 Query: 221 FQLADDLLDCEED 233 FQ+ DD+LD D Sbjct: 232 FQIIDDILDYTSD 244 >gi|256783790|ref|ZP_05522221.1| polyprenyl synthatase [Streptomyces lividans TK24] Length = 342 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + A+E +H +SL+HDDL MD RR + TV Sbjct: 51 GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T +L + + ++ GQ DI Sbjct: 109 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKAS------RSLIDGQAQDIS 162 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + + L +G +LG+ FQ D Sbjct: 163 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVD 222 Query: 226 DLL 228 DLL Sbjct: 223 DLL 225 >gi|297163084|gb|ADI12796.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis BCW-1] Length = 337 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 11/187 (5%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A AL A+E +H +SL+HDDL MD RR + TV Sbjct: 53 GKAVRPALALLSAEAVGAPPEVALPGAVAVELVHNFSLVHDDL--MDGDEERRHRRTVWK 110 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + +AI+ G+ +L A E++ L + + + + ++ GQ+ D+ Sbjct: 111 LWGPSSAILTGDAMLALAQEVL------LDTGLPTAAPAARLLARTTRHLIRGQVQDLSF 164 Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 Q + + + KTGAL+ + GA++A A + + L +G+ +G+ FQL DD Sbjct: 165 EQRSHVTVEECIDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDD 224 Query: 227 LLDCEED 233 +L D Sbjct: 225 VLGIWGD 231 >gi|152985492|ref|YP_001350541.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7] gi|150960650|gb|ABR82675.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7] Length = 322 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLAGKTLGYKGDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L +FE++ + I SQ + LQ + ++ Sbjct: 101 ALWGNAPSVLVGDFLYARSFEMMVELGSMPVMRIISQATRVIAEGEVLQ------LSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A + A + + E LR FG+ LGI FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCRAGEEQAEALRRFGDYLGIAFQLVDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYRGD 219 >gi|254168815|ref|ZP_04875656.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469] gi|197622252|gb|EDY34826.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469] Length = 350 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 34/216 (15%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y L GGK+IR+ L+ + + ++ +++E I Y LIHDD+ MD +RRGK Sbjct: 44 YTLRGGKRIRAILMIVGYKMMGGKNDEIIKASSSLELIQSYLLIHDDI--MDESDLRRGK 101 Query: 105 PTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 TVH I++ E AIIAG+ YA EI+SS + ++ + + Sbjct: 102 DTVHKIYEKKHLKNGFGGRPIRFGESMAIIAGDLANAYAMEILSS--SDFPAELKVKAIH 159 Query: 149 SLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFACES-GAIMAHAS 203 L I G GQ++DI DEF +E + ++ K KT + G I+A Sbjct: 160 KLNEIIEYTGY--GQIIDIYSGALDEFKEE-DLLLLHKYKTARYTIEGPLALGMILAG-- 214 Query: 204 QNEKERLRCFGENLGIIFQLADDLL---DCEEDLPK 236 E E + + +GI FQL DD+L EE++ K Sbjct: 215 -KEPEGIENYAIPVGIAFQLQDDILGLFGSEEEIGK 249 >gi|116250711|ref|YP_766549.1| octaprenyl-diphosphate synthase [Rhizobium leguminosarum bv. viciae 3841] gi|115255359|emb|CAK06434.1| putative octaprenyl-diphosphate synthase [Rhizobium leguminosarum bv. viciae 3841] Length = 338 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L ASLF+ +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMLTLASASLFDYRGENHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A ++ + L+ +G NLG+ FQL DD L Sbjct: 175 DDYLS------VIRAKTAALFAAAAEVGPIVAEVGRSGRNALKSYGMNLGLAFQLVDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|262371901|ref|ZP_06065180.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii SH205] gi|262311926|gb|EEY93011.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii SH205] Length = 325 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 22/192 (11%) Query: 49 GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A VN A + A IE +H +L+HDD+ +D +RRG+PT Sbjct: 46 GGKRMRPIMCLLAAKACGLVNMQQAQHLAAIIEMLHTATLVHDDV--VDESNLRRGRPTA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + ++ TA++ G+ L+ +F+++ T LKD + G + G++L Sbjct: 104 NATWNNQTAVLVGDFLIARSFDLLVDLNNITLLKD-----------FSTGTCEIAEGEVL 152 Query: 166 DIQD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 +Q E +ET + +I KT L A E AI+A ++ +E LR F + G F Sbjct: 153 QLQSQHQPETTEETYLRIIHG-KTSRLFELATEGAAILA-GTEEYREPLRRFAGHFGNAF 210 Query: 222 QLADDLLDCEED 233 Q+ DD+LD D Sbjct: 211 QIIDDILDYTSD 222 >gi|325277088|ref|ZP_08142742.1| polyprenyl synthetase [Pseudomonas sp. TJI-51] gi|324097770|gb|EGB95962.1| polyprenyl synthetase [Pseudomonas sp. TJI-51] Length = 322 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +L Q++ T I +L Q+ ++ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A +A A+ ++E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEEVYMEVIRGKTAMLFEASTHSAAALAEATDAQREALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYKGD 219 >gi|118602394|ref|YP_903609.1| dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567333|gb|ABL02138.1| Dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 323 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 99/186 (53%), Gaps = 8/186 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ CA + IE IH +L+HDD+ +D RRGK TV+ Sbjct: 44 GGKRLRPLLLLLCARATEYQGTHHYLMAVVIELIHTATLLHDDI--VDESITRRGKDTVN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AFE++ P + IR +LS T N +G + Q+L+ + Sbjct: 102 EVWGNAPSVLVGDFLYSRAFEMMIEPNSMYI--IR---ILSKTTNSIAEGEVL-QLLNCK 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + ET+ + + + KT L A + G +++ + ++ L+ +G +LG FQ+ DD+L Sbjct: 156 NTELTETEYYAVIERKTACLFQAATQIGGLLSGVDKAQESALKDYGLHLGNAFQIIDDVL 215 Query: 229 DCEEDL 234 D E ++ Sbjct: 216 DYESNV 221 >gi|297343242|pdb|3N3D|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase F Lactobacillus Brevis Atcc 367 gi|297343243|pdb|3N3D|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase F Lactobacillus Brevis Atcc 367 Length = 335 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 12/221 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77 T L D LL+T + ++L+ ++ GGK +R ++ N L+ GA Sbjct: 19 TALQDYLLRTVQLDNQPIHHKILALLKS---GGKLLRPGYFYLFSTFGNAATPAQLQAGA 75 Query: 78 A-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A IE +H +LIHDD+ +D+ RRG T+ + Y + AI AG+ + T F+ + T Sbjct: 76 AAIEILHVGTLIHDDV--IDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLKSTT 133 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196 D Q + H I LQG L L+ +++ + + I KT L +C G Sbjct: 134 ---DRSLIQNHIDAMHRI-LQGELHQMDLNYREDITLDAYLNEIAG-KTAELFALSCYQG 188 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 A +A A Q+ +R R G +G +Q+ DD+LD D PK+ Sbjct: 189 AQLAGAPQSVIDRTRDIGIAIGCAYQMLDDILDYAGD-PKR 228 >gi|87122767|ref|ZP_01078640.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121] gi|86161932|gb|EAQ63224.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121] Length = 327 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 104/198 (52%), Gaps = 15/198 (7%) Query: 39 LLSAIRYALL--GGKKIRSFLV----TECASLFNVNHL-TALRVGAAIECIHCYSLIHDD 91 L+ I Y ++ GGK++R LV C + N+ +++ IE IH +L+HDD Sbjct: 31 LIEQIGYYIISNGGKRLRPLLVLMAARACGNADASNYQDNMVKMATIIEFIHTATLLHDD 90 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D +RRGK T + ++ +++ G+ L + AF+I+ + ++ +L+ T Sbjct: 91 V--VDESDMRRGKKTANEEWGNAPSVLVGDFLYSRAFQIMVEVGS-----MQCMQILAET 143 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 NI +G + Q+++ D E + + KT L A GAI+A+A++ +++ L Sbjct: 144 TNIISEGEVQ-QLINCGDPSTSEESYLKVIQYKTAKLFEGAALCGAIVANANKEQQQALA 202 Query: 212 CFGENLGIIFQLADDLLD 229 +G +G FQL DD++D Sbjct: 203 DYGTYVGTAFQLIDDVMD 220 >gi|262369367|ref|ZP_06062695.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046] gi|262315435|gb|EEY96474.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046] Length = 325 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 20/191 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A L R + A IE +H +L+HDD+ +D +RRG+PT Sbjct: 46 GGKRMRPIMCLLAAKACGAEDLERQRKLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + ++ TA++ G+ L++ AF+++ T LKD + G + G++L Sbjct: 104 NATWNNQTAVLVGDFLISRAFDLLVDLGDMTLLKD-----------FSTGTCEIAEGEVL 152 Query: 166 DIQDEFIDET--QVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 +Q + ET Q ++ I KT L A E AI++ Q +E LR F + G FQ Sbjct: 153 QLQAQHQPETTEQTYLDIIHGKTSRLFELATEGAAILSGTPQY-REPLRLFAGHFGNAFQ 211 Query: 223 LADDLLDCEED 233 + DD+LD D Sbjct: 212 IIDDILDYTSD 222 >gi|238757559|ref|ZP_04618744.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236] gi|238704321|gb|EEP96853.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236] Length = 323 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALHYKGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++ ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRAFQMMTGLES-----LRVLTLMSAATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A++A AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAAAQSAAVLAEASEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|302148849|pdb|3NF2|A Chain A, Crystal Structure Of Polyprenyl Synthetase From Streptomyces Coelicolor A3(2) Length = 352 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + A+E +H +SL+HDDL MD RR + TV Sbjct: 53 GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T +L + + ++ GQ DI Sbjct: 111 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKAS------RSLIDGQAQDIS 164 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D V ++ KTGAL+ A GA++ A + + L +G +LG+ FQ D Sbjct: 165 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVD 224 Query: 226 DLL 228 DLL Sbjct: 225 DLL 227 >gi|299065629|emb|CBJ36801.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CMR15] Length = 322 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPVILLLMANALGYRGQHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ D++R +L+ N+ +G + Q+L++ Sbjct: 101 AAFGNAASVLVGDFLYSRAFQMMVQ-----ADSMRVMQILADATNVISEGEVL-QLLNMH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + + KT L A + GA+++ A + +G +G FQ+ DDLL Sbjct: 155 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|312597572|pdb|3PKO|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Citrate gi|312597573|pdb|3PKO|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Citrate Length = 334 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 12/221 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77 T L D LL+T + ++L+ ++ GGK +R ++ N L+ GA Sbjct: 26 TALQDYLLRTVQLDNQPIHHKILALLKS---GGKLLRPGYFYLFSTFGNAATPAQLQAGA 82 Query: 78 A-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A IE +H +LIHDD+ +D+ RRG T+ + Y + AI AG+ + T F+ + T Sbjct: 83 AAIEILHVGTLIHDDV--IDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLKSTT 140 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196 D Q + H I LQG L L+ +++ + + I KT L +C G Sbjct: 141 ---DRSLIQNHIDAMHRI-LQGELHQMDLNYREDITLDAYLNEIAG-KTAELFALSCYQG 195 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 A +A A Q+ +R R G +G +Q+ DD+LD D PK+ Sbjct: 196 AQLAGAPQSVIDRTRDIGIAIGCAYQMLDDILDYAGD-PKR 235 >gi|148260434|ref|YP_001234561.1| polyprenyl synthetase [Acidiphilium cryptum JF-5] gi|146402115|gb|ABQ30642.1| Polyprenyl synthetase [Acidiphilium cryptum JF-5] Length = 344 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + + A +E IH +L+HDD+ +D +RRG + + Sbjct: 63 GGKRLRPLLTLAAARLCGYRGERHIHLAACVEFIHTATLLHDDV--VDESGLRRGLASAN 120 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L AFE++ + D +R ++ + + I +L Q+ Sbjct: 121 AVFGNKASVLVGDFLFARAFELMVEDGSL--DVLR--ILCNASATIAEGEVL--QLTTQN 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D D + F + + KT AL ACE G ++A L C+G LG+ FQL DD L Sbjct: 175 DLSTDIPRYFKVIEGKTAALFAAACEVGGVVADRDSAVCGALACYGAALGMAFQLVDDAL 234 Query: 229 DCEED 233 D D Sbjct: 235 DYAAD 239 >gi|156741272|ref|YP_001431401.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] gi|156232600|gb|ABU57383.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] Length = 338 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 22/195 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L + + AL + AAI+ +H +SLIHDD+ D RRG+PTV Sbjct: 51 GKLLRPRLCLLSCRVVGGDPRDALPLAAAIQLLHDFSLIHDDI--QDQSDTRRGRPTVWK 108 Query: 110 QYDEVTAIIAGNGLLTYA------FEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLG 161 + I G+G+ T A + P + D +R + +L++ Sbjct: 109 LWGLAQGINTGDGMFTIAHLALHRLSLTGVPPATVLDVLRRFDETILTICE--------- 159 Query: 162 GQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 GQ LD+ E IDE+ + + KT AL+ + E GA++ A + + L FG LG Sbjct: 160 GQFLDLSYEGNLQIDESAYLAMIERKTAALIAASAELGALVGGADEETIQALFDFGRALG 219 Query: 219 IIFQLADDLLDCEED 233 + FQ+ DD+L D Sbjct: 220 LAFQIEDDVLGIWGD 234 >gi|163792420|ref|ZP_02186397.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] gi|159182125|gb|EDP66634.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] Length = 340 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 59 GGKRLRPMLTLATAGLCGYTGERHIGLAACVEFIHTATLLHDDV--VDESDLRRGQDTAN 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ +++ +LS I +G + Q++ Sbjct: 117 AVWGNQASVLVGDFLFSRAFQLMVG-----DGSLKVLKILSDASAIIAEGEVH-QLITTN 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L A + G ++A + E+ L FG +LG+ FQL DD+L Sbjct: 171 DIDTTEAAYLEVIRCKTAQLFAAAAQIGPVVAERPEAEEMALEGFGRDLGVAFQLVDDVL 230 Query: 229 D 229 D Sbjct: 231 D 231 >gi|227494517|ref|ZP_03924833.1| possible trans-hexaprenyltranstransferase [Actinomyces coleocanis DSM 15436] gi|226832251|gb|EEH64634.1| possible trans-hexaprenyltranstransferase [Actinomyces coleocanis DSM 15436] Length = 332 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 24/194 (12%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R LV CA L + + + + V A+E H +L HDD+ MD+ RRG P Sbjct: 45 GGKRMRPLLVLICAQLGSPSQVASQDVIDAATAVELTHLATLYHDDV--MDSAPQRRGVP 102 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 Q+ AI+AG+ L A +++ + D H + + GQ+ Sbjct: 103 AAQHQWGNNRAILAGDVLFARASRLVARLGQRTIDY----------HAQTFERLCIGQL- 151 Query: 166 DIQDEFIDETQV----FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + F ET F I+ + KTG+L+ A GA A+ E + +GE +G+ Sbjct: 152 --NETFGPETDFDPVEFYIKVLSDKTGSLINTAAVFGAWHGGATDEVAEAVGVYGERIGV 209 Query: 220 IFQLADDLLDCEED 233 FQLADD++D D Sbjct: 210 AFQLADDVIDLTSD 223 >gi|328953238|ref|YP_004370572.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM 11109] gi|328453562|gb|AEB09391.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM 11109] Length = 325 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 19/224 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65 +LQ + RI+ L L A+H+ RL+S + +L GGK+IR L A + Sbjct: 11 RLQPDIDRINLALSGNL---ATHV------RLISEVWDHILISGGKRIRPLLFILAARMC 61 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 +GA E +H +L+HDD+ +D RRG+ + + + I+ G+ LL+ Sbjct: 62 GCRGDHLPDIGAIFEYLHAATLLHDDV--VDAATERRGQSSANTIWGNQAVILVGDFLLS 119 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 A I + + +Q + LQ + G++ ++E+ D + KT Sbjct: 120 KALSIAVETRQIRIIEVLAQTTTYMAEGEVLQLVNTGRLEMTEEEYFD------VITRKT 173 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 LM AC+ GAI+ + + FG NLGI FQL DD+LD Sbjct: 174 AKLMSAACQIGAILGGVDGRLEAAMADFGLNLGITFQLIDDILD 217 >gi|217977299|ref|YP_002361446.1| Polyprenyl synthetase [Methylocella silvestris BL2] gi|217502675|gb|ACK50084.1| Polyprenyl synthetase [Methylocella silvestris BL2] Length = 337 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L N +++ A++E +H +L+HDD+ +D +RRGK Sbjct: 56 GGKRLRPMLTLATAGLCNYRGAGHVKLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 113 Query: 109 IQYDEVTAIIAGNGLLTYAF----EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + + +++ G+ LL AF E+ S P + LS + +G + Q+ Sbjct: 114 MLWGNEASVLVGDFLLGQAFKMMVEVGSLPCLDV---------LSAAAAVIAEGEVM-QL 163 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D E + + KT AL A E G ++A + E R +G NLG+ FQL Sbjct: 164 SAAKDTETSEDDYLAVIRAKTAALFGAAAEVGPLLAGRPKAEIAACRGYGLNLGVAFQLI 223 Query: 225 DDLLD 229 DD LD Sbjct: 224 DDALD 228 >gi|15790228|ref|NP_280052.1| IdsA [Halobacterium sp. NRC-1] gi|169235957|ref|YP_001689157.1| trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase) [Halobacterium salinarum R1] gi|10580688|gb|AAG19532.1| geranylgeranyl diphosphate synthase [Halobacterium sp. NRC-1] gi|167727023|emb|CAP13809.1| putative trifunctional short-chain (E)-prenyl diphosphate synthase (probable dimethylallyltransferase / probable geranyltranstransferase / probable farnesytranstransferase) [Halobacterium salinarum R1] Length = 347 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 34/243 (13%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIR-SFLVTECASL 64 + ++E ++++ +DD + +RL A RY L GGK++R + L+ +L Sbjct: 12 AAVRERRQQVNDAIDD-------DLPVAEPERLYEASRYILEAGGKRLRPAVLLLTAEAL 64 Query: 65 FNVN--------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110 + + H+ + +IE I ++LIH MD+ +RRG P VH + Sbjct: 65 ADTSDTPPYREFPDCIGGHVDVMSAAVSIEVIQSFTLIH--DDIMDDDDLRRGSPAVHRE 122 Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--- 167 YD TAI+AG+ L + AFEI+ + +R+ L+ T + GQ +DI Sbjct: 123 YDTETAILAGDTLYSKAFEIMLETGAPPERGLRAMRTLAET----CTHICEGQAMDIDFE 178 Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + + + + M++ +KT L A ++ A + E L +G +G FQ+ DD Sbjct: 179 TRGDVVTDEYLEMVE-LKTAVLYAAAATLPGLLLSADEETVEALYNYGLRVGQAFQIQDD 237 Query: 227 LLD 229 +LD Sbjct: 238 VLD 240 >gi|253702068|ref|YP_003023257.1| trans-hexaprenyltranstransferase [Geobacter sp. M21] gi|251776918|gb|ACT19499.1| Trans-hexaprenyltranstransferase [Geobacter sp. M21] Length = 322 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV + L + ++ + + +E IH +L+HDD+ +DN +RRG + + Sbjct: 41 GGKRIRPALVLLASRLCGYDGNRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F ++ + ++R +L+ I +G + Q++ Sbjct: 99 TLWGNEASVLVGDFLFSKSFSLMVT-----DGDLRILKVLADATTIIAEGEVL-QLVCTC 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I + + + KT L+ ACE GAI+ A ++ L +G +LGI FQL DD L Sbjct: 153 DLDITVERYIEVVRSKTAILLSAACEVGAILGEADPEHRQALADYGMDLGIAFQLMDDTL 212 Query: 229 D 229 D Sbjct: 213 D 213 >gi|217967661|ref|YP_002353167.1| Polyprenyl synthetase [Dictyoglomus turgidum DSM 6724] gi|217336760|gb|ACK42553.1| Polyprenyl synthetase [Dictyoglomus turgidum DSM 6724] Length = 343 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 17/237 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL-LSAIRYALLGGKKIRSFLVTECAS 63 + +KLQEN + + + + L TA HM D L+ IR GK++R Sbjct: 13 IENKLQENWNKFSSNIS-IHLITAYHMGWVGEDLTPLANIR----RGKRLRPLFCVLVNQ 67 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 AL +G+AIE +H +SL+HDD+ D R G+ TV + E AI G+ L Sbjct: 68 TLGGFLDDALEIGSAIEFLHNFSLVHDDIQDRDEK--RHGRWTVWKIWGEAQAINVGDLL 125 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 F+++++ K+ + + S+ + LT I + ++ GQ LDI E I + M+ Sbjct: 126 FNMVFQVLTNLKSPV---LLSKSLKELTETI--RELIEGQYLDISFEKRKDISLKEYLMM 180 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 KT L + GA A ++ + + G + G+ FQ+ADD + D P+K Sbjct: 181 IDKKTAKLFSTSFYLGAFSATYKEDLSKIFQEIGRDFGLFFQIADDAIGIWGD-PEK 236 >gi|332140074|ref|YP_004425812.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|332143128|ref|YP_004428866.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327550096|gb|AEA96814.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327553150|gb|AEA99868.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] Length = 324 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A +++ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLTVLSARAMGIDNNEHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ S K +R +LS N +G + Q+++ Sbjct: 101 AIFGNQASVLVGDFLYTRSFQMMVSLK-----RMRVMEILSEATNQIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + F + KT L A + A++ +++ + ++ +G++LG FQLADD+L Sbjct: 155 DAGTTEARYFDVIYGKTARLFEAATQLAAVLTEQNEHIERAMQEYGKHLGTAFQLADDIL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYMAD 219 >gi|294626299|ref|ZP_06704902.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666655|ref|ZP_06731892.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599445|gb|EFF43579.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603561|gb|EFF46975.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 332 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + AS+ +++L +G LG FQ+ADD+L Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGASEQVQQQLYDYGMQLGFAFQIADDVL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|302553460|ref|ZP_07305802.1| heptaprenyl diphosphate synthase component II [Streptomyces viridochromogenes DSM 40736] gi|302471078|gb|EFL34171.1| heptaprenyl diphosphate synthase component II [Streptomyces viridochromogenes DSM 40736] Length = 336 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVASAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 ++ A++ G+ L A ++ + +R Q + ++ GQ+L+ Sbjct: 111 TRWGNSVAVLTGDFLFARASHTLADLGPE---AVRVQAE-------AFERLVTGQILETA 160 Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 QD + KTG+L+ +C GA+M+ A + + L +GE LG+ FQLAD Sbjct: 161 GPQDGRDPVEHYLDVLAGKTGSLVAVSCRFGAMMSGADETTVDVLTQYGERLGVAFQLAD 220 Query: 226 DLLDCEED 233 D+LD D Sbjct: 221 DVLDIASD 228 >gi|300742151|ref|ZP_07072172.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Rothia dentocariosa M567] gi|300381336|gb|EFJ77898.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Rothia dentocariosa M567] Length = 353 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 13/202 (6%) Query: 35 HNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + D+L A R+ LL GGK++R L A++ + + +E H +L HDD+ Sbjct: 55 YTDKLADVAARHLLLAGGKRVRPLLTLLAAAVDGQINDDVIEAAVVVELTHLATLYHDDV 114 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLT 151 MD+ RRG T + AI+ G+ + + A ++S T+ +K ++ L L Sbjct: 115 --MDDAPKRRGVDTAQTIWGNSVAILTGDLIFSRASLLVSDLGTRPMKIQAQTFERLVLG 172 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G+ Q DI D +I + + KTG+L+ A E G+++A AS+ + L Sbjct: 173 QLYETTGVRENQ--DILDHYIS------VIEGKTGSLIAAAGEYGSLLAGASEEVIQMLA 224 Query: 212 CFGENLGIIFQLADDLLDCEED 233 +GE +G+ FQLADD++D D Sbjct: 225 TYGELVGVAFQLADDVIDIVSD 246 >gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays] gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays] Length = 363 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 8/200 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L ++RY++L GGK++R L L A+ V A+E IH SLIHDD+P MD+ Sbjct: 95 LSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDD 154 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIG 155 +RRG+P+ H+ + E TA++AG+ LL AFE ++ S + + + ++ L G Sbjct: 155 DALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAG 214 Query: 156 LQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERL 210 + G+ GQ+ D+ E V + I KT L+ A SGA++ E ER+ Sbjct: 215 VGGIAAGQVADMASEGAPSGSVSLGALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERV 274 Query: 211 RCFGENLGIIFQLADDLLDC 230 R + LG++ Q+ DD+LD Sbjct: 275 RRYAHFLGLLGQVVDDVLDV 294 >gi|296116309|ref|ZP_06834925.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295977128|gb|EFG83890.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 334 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 14/190 (7%) Query: 49 GGKKIRSFLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R L A L + H + + A +E IH +L+HDD+ +D +RRG Sbjct: 49 GGKRLRPLLTLASARLCGYEPDATHQRHVALAACVEFIHTATLLHDDV--VDESTLRRGL 106 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + + + +++ G+ L +F++++ + NI S ++ LQ Sbjct: 107 ASANAIFGNKASVLVGDFLFARSFQLMTDDGSLKVMNILSSASATIAEGEVLQ------- 159 Query: 165 LDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + Q++ + ++ + KT AL AC GA++A +E L +G NLG+ FQL Sbjct: 160 MSTQNDLSTSIEKYLEVIHGKTAALFAAACRVGAVVADQPLKVEEALDSYGTNLGMAFQL 219 Query: 224 ADDLLDCEED 233 DD LD D Sbjct: 220 VDDALDYAAD 229 >gi|145608148|ref|XP_360800.2| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|145015645|gb|EDK00135.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 364 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 89/166 (53%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG P+ ++++ A++ G+ LL A S Sbjct: 106 RLAEITELIHTASLLHDDV--IDHSESRRGSPSANLEFGNKMAVLGGDFLLGRA----SV 159 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--------VFMIQK--M 183 +L+D ++L+ ++ N ++ G+ + +++ DE++ + +QK + Sbjct: 160 ALARLRDAEVTELLATVIAN-----LVEGEFMQLKNTSRDESRPVWSEDALTYYLQKTYL 214 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ +C + A++ A + FG+NLG+ FQL DD+LD Sbjct: 215 KTASLISKSCRASALLGGADAQTVDAAYAFGKNLGLAFQLVDDMLD 260 >gi|93006580|ref|YP_581017.1| trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5] gi|92394258|gb|ABE75533.1| Trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5] Length = 344 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + CA + N A+ + A E +H +L+HDD+ +D RRGKPT Sbjct: 62 GGKRMRPLITLLCARMLNDEPSKQAMHLAAITEMLHTATLVHDDV--IDESGQRRGKPTA 119 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + +D TA++ G+ L+ AF ++ ++ L L + G + G++L + Sbjct: 120 NATWDNATAVLVGDYLIARAFNLLVGFQS---------LPLLQVFSDGTCDIAEGEVLQL 170 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q + E I KT L A + AI+ +Q+ + L FG++ G FQ+ Sbjct: 171 QHQHNPEATEQDYLNIIDGKTSRLFMMATQGAAILQGQTQH-LQALANFGQHFGNAFQIV 229 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 230 DDVLDYSGD 238 >gi|302559082|ref|ZP_07311424.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000] gi|302476700|gb|EFL39793.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000] Length = 336 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVMLSAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVASAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++ A++ G+ L A I++ + +R Q + ++ GQ+L Sbjct: 111 ARWGNSVAVLTGDFLFARASHILADLGPE---AVRVQAE-------AFERLVTGQILETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ +C GA+M+ A + L +GE LG+ Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADDTVVDVLTQYGERLGV 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDIASD 228 >gi|239995268|ref|ZP_04715792.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii ATCC 27126] Length = 324 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A +++ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLTVLSARAMGIDNNDHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ S K +R +LS N +G + Q+++ Sbjct: 101 AIFGNQASVLVGDFLYTRSFQMMVSLK-----RMRVMEILSEATNQIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + F + KT L A + A++ +++ + ++ +G++LG FQLADD+L Sbjct: 155 DPSTTEARYFDVIYGKTARLFEAATQLAAVLTDQNEHIEHAMQEYGKHLGTAFQLADDIL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYMAD 219 >gi|281207569|gb|EFA81752.1| trans-prenyltransferase [Polysphondylium pallidum PN500] Length = 529 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 24/201 (11%) Query: 42 AIRYALLGGKKIRS---FLVTECASLFNVNHL----------TALRVGAAIECIHCYSLI 88 A Y L GK+IR L+ S+ N + +R+ +E IH SL+ Sbjct: 236 AAYYFDLKGKRIRPTILLLLARALSIANSANPANQSAIQPSSVQMRLAEIVEMIHTASLV 295 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D+ RR P+++ Y AI+ G+ LL+ A ++S+ K + S ++ Sbjct: 296 HDDV--IDDADTRRDVPSINHTYSNKLAILCGDFLLSRASVLLSTLKNHEVTELMSTVIS 353 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 L +Q G DI +I +T +KT +L+ +C S AI++ + + + Sbjct: 354 DLVEGEFMQIKASGSSFDI---YIRKTY------LKTASLIANSCRSTAILSGSDRQVID 404 Query: 209 RLRCFGENLGIIFQLADDLLD 229 FG+NLG+ FQ+ DDLLD Sbjct: 405 IATDFGKNLGLAFQIVDDLLD 425 >gi|59710884|ref|YP_203660.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114] gi|59478985|gb|AAW84772.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114] Length = 323 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T +F++++S + I+ ++S N+ +G + Q+++ Sbjct: 101 AEFGNAASVLVGDFIYTRSFQMMTSLGS-----IKILSLMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A Q + L+ +G+ LG FQL DD++ Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILNDAPQEIETALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|20092943|ref|NP_619018.1| polyprenyl synthetase [Methanosarcina acetivorans C2A] gi|19918255|gb|AAM07498.1| polyprenyl synthetase [Methanosarcina acetivorans C2A] Length = 295 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 18/186 (9%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR ++ + + + ++ +L A+E +H SLIHDDL +D G IRR P+ Sbjct: 48 FGGKRIRPIILLLASEICSGSYSRSLDAALAVEMMHSASLIHDDL--LDQGLIRRNLPSA 105 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM--LGGQML 165 ++ A++ G+ L+ + IS P + + + G GM G++L Sbjct: 106 PEKFGPSRALLCGDYLIAKSIAFIS-PYGE-----------KVIRDFGKAGMDMAEGEVL 153 Query: 166 DIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D++ D+ E F KT +L + GA A + ER FG +LG +Q+ Sbjct: 154 DLRLDDDKFGEDDYFKCIYKKTASLFAISASIGAYTGGADEALAERFSFFGNSLGTAYQI 213 Query: 224 ADDLLD 229 DD+L+ Sbjct: 214 VDDILE 219 >gi|311112076|ref|YP_003983298.1| trans-hexaprenyltranstransferase [Rothia dentocariosa ATCC 17931] gi|310943570|gb|ADP39864.1| trans-hexaprenyltranstransferase [Rothia dentocariosa ATCC 17931] Length = 370 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 13/202 (6%) Query: 35 HNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + D+L A R+ LL GGK++R L A++ + + +E H +L HDD+ Sbjct: 72 YTDKLADVAARHLLLAGGKRVRPLLTLLAAAVDGQINDDVIEAAVVVELTHLATLYHDDV 131 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLT 151 MD+ RRG T + AI+ G+ + + A ++S T+ +K ++ L L Sbjct: 132 --MDDAPKRRGVDTAQTIWGNSVAILTGDLIFSRASLLVSDLGTRPMKIQAQTFERLVLG 189 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G+ Q DI D +I + + KTG+L+ A E G+++A AS+ + L Sbjct: 190 QLYETTGVRENQ--DILDHYI------AVIEGKTGSLIAAAGEYGSLLAGASEEVIQMLA 241 Query: 212 CFGENLGIIFQLADDLLDCEED 233 +GE +G+ FQLADD++D D Sbjct: 242 TYGELVGVAFQLADDVIDIVSD 263 >gi|295396390|ref|ZP_06806553.1| decaprenyl diphosphate synthase [Brevibacterium mcbrellneri ATCC 49030] gi|294970759|gb|EFG46671.1| decaprenyl diphosphate synthase [Brevibacterium mcbrellneri ATCC 49030] Length = 345 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 32/228 (14%) Query: 14 KRIDTILDDLLLQTASHM-QTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72 + ++T+LD QT++ +T H+ L+ A GGK++R LV C+ L Sbjct: 35 QHVETVLDAAASQTSAFADETSHH--LMRA------GGKRVRPMLVLLCSQLGGGVSPRV 86 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+E +H SL HDD+ MD RRG + H ++ AI+ G+ L A Sbjct: 87 HTAAAAVELVHLASLYHDDV--MDEAPKRRGALSAHEKWGNNVAILTGDLLFARA----- 139 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-------VFMIQKMKT 185 +QL + ++ M + ++ GQ+ EF+ T+ + KT Sbjct: 140 ---SQLSLEVGAEAMRVQAET--FERLVLGQL----HEFVGTTESDDPIEHYLSVLADKT 190 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 G+L+ +C+ G I + ++ +GE +G+ FQLADD++D D Sbjct: 191 GSLISASCQFGVIASDGPAELLPVVKEYGEAVGVAFQLADDVIDLTVD 238 >gi|197333941|ref|YP_002155036.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11] gi|197315431|gb|ACH64878.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11] Length = 323 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T +F++++S + I+ ++S N+ +G + Q+++ Sbjct: 101 AEFGNAASVLVGDFIYTRSFQMMTSLGS-----IKILSLMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A Q + L+ +G+ LG FQL DD++ Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILNDAPQEIETALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|48477920|ref|YP_023626.1| geranylgeranyl pyrophosphate synthase [Picrophilus torridus DSM 9790] gi|48430568|gb|AAT43433.1| geranylgeranyl pyrophosphate synthase [Picrophilus torridus DSM 9790] Length = 345 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 20/199 (10%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 + + + GGK++R ++ SLFN ++ +IE Y LIHDD+ MD +RR Sbjct: 43 MEFTMNGGKRLRPIMMITGYSLFNDIDDNIIKASISIELAQSYLLIHDDI--MDQSDMRR 100 Query: 103 GKPTVHIQYDEV---------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 G+P+ H + AI+AG+ + +++ E + + +K+ I + S Sbjct: 101 GRPSFHRSVETRLNDPRNSMNIAIVAGDLIDSFSHEALLTSGFDIKNLISADYEFSKV-- 158 Query: 154 IGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 ++ GQ++DI DEF E+++ + MKT M ++ + + Sbjct: 159 --IEDTGKGQLIDIFSSLDDEF-SESRLMKLHYMKTARYTIEGPLVMGAMLAGNKKDIDY 215 Query: 210 LRCFGENLGIIFQLADDLL 228 LR +G+N+GI FQ+ DD+L Sbjct: 216 LRIYGKNIGIAFQIKDDIL 234 >gi|307352924|ref|YP_003893975.1| polyprenyl synthetase [Methanoplanus petrolearius DSM 11571] gi|307156157|gb|ADN35537.1| Polyprenyl synthetase [Methanoplanus petrolearius DSM 11571] Length = 321 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 17/236 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L L++N++ IDT L+ + + + + LL A GGK++R + A++ Sbjct: 3 LEEYLEKNAELIDTRLESMYGSLPGELD-KASAHLLCA------GGKRLRPSVTMLAANI 55 Query: 65 FNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 ++ A A+E H ++L+HDD+ MD RRG PTVH ++DE TAI+AG+ L Sbjct: 56 VEKGSSDSVIPAALALEVTHTFTLVHDDI--MDGDVARRGVPTVHTKWDEPTAILAGDVL 113 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 AFE+I+ + + +L+ T + GQ D+ E D+ + +M Sbjct: 114 YAEAFELITMADADPVAKVEAVAILART----CLEICRGQHEDMSFEKRDDVDPYEYLEM 169 Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTG L A G I+A + L +G G+ FQ+ DD++D D K Sbjct: 170 VGQKTGKLYAAAAAIGGILAGGDARQVGALHDWGYLSGVAFQIQDDVIDLMADSEK 225 >gi|302390267|ref|YP_003826088.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646] gi|302200895|gb|ADL08465.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646] Length = 323 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV A N ++ + A+E +H +LIHDD+ +D+ +RRG TV Sbjct: 43 GGKRIRPALVYLSARFGNYDYEKIKPLAVAVELVHTATLIHDDI--VDDSPLRRGISTVQ 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + A+ AG+ +L F+I + + ++ S L + + + DI Sbjct: 101 AAIGKDAAVYAGDYVLARTFKILVDHGDFDILKSVSSVLYRVCEGEVRQKR----EAFDI 156 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 F+D + + KT L +CE GA A A L+ +G LG+ FQ+ DD+ Sbjct: 157 TISFLDYARRI---RKKTALLFALSCELGARGAKADPRTISALKKYGILLGMAFQVMDDI 213 Query: 228 LDCEED 233 LD ED Sbjct: 214 LDLTED 219 >gi|301166557|emb|CBW26133.1| geranyltranstransferase [Bacteriovorax marinus SJ] Length = 311 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 93/160 (58%), Gaps = 11/160 (6%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + +A+E H Y+L+HDDLPSMD+ RRGKP HI+++E A++AG+GL T +F +++ Sbjct: 69 LASAVEVHHAYTLLHDDLPSMDDDDTRRGKPATHIKFNEWKALLAGDGLQTASFALLA-- 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191 + ++ + +G +G++ GQ LD+ +E IDE + + + KT L+ Sbjct: 127 --KYGHKNLGLILKFFSWALGPKGLIQGQYLDLSEEMTKGIDE--LILTHQYKTARLIQT 182 Query: 192 ACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLD 229 + G + A+ + + + F G ++G++FQL DDL + Sbjct: 183 SILLGYWSSSATTDYRTSKQLFRLGHSVGVVFQLLDDLTE 222 >gi|227873691|ref|ZP_03991924.1| possible dimethylallyltranstransferase [Oribacterium sinus F0268] gi|227840459|gb|EEJ50856.1| possible dimethylallyltranstransferase [Oribacterium sinus F0268] Length = 161 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 12/137 (8%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N + Q+ + ++ IL L + +T + A+ Y+L+ GGK+IR L+ E Sbjct: 26 NHSVEEGFQKRREEVEAILTTFLPEEKGPAKTG-----IEAMNYSLMVGGKRIRPILLRE 80 Query: 61 CASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 LF L + A+E IH +SL HDDLP+MDN RRGK ++ E Sbjct: 81 AFLLFAGEERQKLFLPLTEAFMLAMEMIHSFSLCHDDLPAMDNDKYRRGKEATWYRFTEA 140 Query: 115 TAIIAGNGLLTYAFEII 131 I+AG+ L YAF+ + Sbjct: 141 QGILAGDSLSLYAFQWV 157 >gi|196230032|ref|ZP_03128895.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428] gi|196225629|gb|EDY20136.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428] Length = 330 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 16/191 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R L + L + +E IH +L+HDD+ +D RRG+PT + Sbjct: 48 GKRLRPALALLAGGATGNICPSHLDLAVILELIHAATLVHDDI--LDGADKRRGQPTANA 105 Query: 110 QYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ L +A ++ +S P ++ I H + G+++ Q Sbjct: 106 KWGNAISVLLGDCLFAHALKLSTSFPNGEISRRI--------AH--AASEVCSGEIIQTQ 155 Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 F + + I +MKT AL ACE GA++ A+ + LR FG LG +Q+ D Sbjct: 156 RRFDLKLSVPDYYKIIEMKTAALFAAACELGALINEAAPEVIDALRIFGLQLGTAYQIYD 215 Query: 226 DLLDCEEDLPK 236 D+LD D K Sbjct: 216 DVLDLAGDEAK 226 >gi|257092398|ref|YP_003166039.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044922|gb|ACV34110.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 320 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 41 GGKRLRPALVLLAAGALDYRGTHHHELAAVIEFIHTATLLHDDV--VDGSDLRRGRDTAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ + D++R +LS N+ +G + Q+++ Sbjct: 99 AIFGNSASVLVGDFLYSRAFQMMVAV-----DDMRVMRVLSDATNVIAEGEVL-QLMNCH 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + KT L A + GAI+ S ++ + +G +LG FQL DD+L Sbjct: 153 DADVDEAGYLQVIRYKTAKLFEAAAQLGAIIGGGSAAAEQGMATYGIHLGTAFQLIDDVL 212 Query: 229 D 229 D Sbjct: 213 D 213 >gi|261365500|ref|ZP_05978383.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996] gi|288566037|gb|EFC87597.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996] Length = 324 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 111/221 (50%), Gaps = 15/221 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 L E+ R++ +++ + Q+ + +Q ++SA GGK++R + + Sbjct: 12 LPEDLSRVNEVINKAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKSVGYD 64 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L T AF Sbjct: 65 GDKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLYTRAF 122 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 +++ + +R +++ NI +G + Q+++I + I E Q + + KT L Sbjct: 123 QLMVDSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEAQYVQVIQYKTAKL 176 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + GAI+ +A ++ L+ +G +G FQ+ DD+LD Sbjct: 177 FEAAAQVGAILGNAPPEHEQALKDYGMYVGTAFQIIDDVLD 217 >gi|115378176|ref|ZP_01465349.1| heptaprenyl diphosphate synthasecomponent II [Stigmatella aurantiaca DW4/3-1] gi|310821415|ref|YP_003953773.1| polyprenyl synthase family protein [Stigmatella aurantiaca DW4/3-1] gi|115364808|gb|EAU63870.1| heptaprenyl diphosphate synthasecomponent II [Stigmatella aurantiaca DW4/3-1] gi|309394487|gb|ADO71946.1| Polyprenyl synthase family protein [Stigmatella aurantiaca DW4/3-1] Length = 332 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 18/200 (9%) Query: 36 NDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 D L+ A R+ LG K+ R LV+ ++ + V + E IH SL+HDD+ Sbjct: 33 GDTLMEAARHLCLGSGSKRARPMLVSLFGDAVGLSSEHLVDVAVSAELIHSASLLHDDV- 91 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +D G RRG+PTV+ ++ + A+++G+ +L+ ++ QL + + S+ LS+ Sbjct: 92 -VDAGMFRRGRPTVNARWGNIVAVMSGDLILSTTLLRLA----QLDERL-SRSALSVVSE 145 Query: 154 IGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 M + +++ + E ++ I + KTG+L + + A +A+ + K R Sbjct: 146 -----MTRAAITEVEARGVMELPLPRLRYIAEGKTGSLFGWCGHAAATLANQPEAAK-RF 199 Query: 211 RCFGENLGIIFQLADDLLDC 230 FG +LG+ FQ+ADD+ D Sbjct: 200 DGFGRHLGVAFQIADDIRDV 219 >gi|320095563|ref|ZP_08027226.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977471|gb|EFW09151.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 178 str. F0338] Length = 337 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 18/187 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L CA L RV A+E H SL HDD+ MD+ RRG P Sbjct: 50 GGKRLRPLLTLVCAQLGRPELALGERVITGATAVELTHLASLYHDDV--MDSAPTRRGVP 107 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + + AI+AG+ L A ++++ ++ H + + + GQ+ Sbjct: 108 SAQRLWGNNRAILAGDVLFARASALVAALGPEMVTR----------HAVTFERLCTGQLN 157 Query: 166 DIQDEFIDETQV-FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + E V F ++ + KTG+L+ A GA+++ A + + FGE +G+ FQ Sbjct: 158 ETFGPAPGEDPVEFYLRVLADKTGSLVSSAAAFGALLSDAGAFVGDVVAEFGERVGVAFQ 217 Query: 223 LADDLLD 229 +ADD+LD Sbjct: 218 IADDVLD 224 >gi|239613774|gb|EEQ90761.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis ER-3] gi|327350044|gb|EGE78901.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis ATCC 18188] Length = 520 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 89/162 (54%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++++ A++AG+ LL A ++ Sbjct: 262 RLAEITELIHTASLLHDDV--IDNAVTRRSAVSANLEFGNKMAVLAGDFLLGRASVALA- 318 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQVFMIQK--MKTGA 187 +L+D +L+ ++ N+ ++G + + ++ F ++T + +QK +K+ + Sbjct: 319 ---RLRDPEVIELLSTVIANL-IEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSAS 374 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + A++ H+S E +G NLG+ FQL DD+LD Sbjct: 375 LISKSCRAAALLGHSSPQIVEAAYSYGRNLGLAFQLVDDMLD 416 >gi|219669380|ref|YP_002459815.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] gi|219539640|gb|ACL21379.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] Length = 322 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 8/190 (4%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 SA++ GGK++R + L V A+E IH +L+HDD+ +D Sbjct: 35 SAVQLLEAGGKRLRPAFTLLAGKFYGYPIDRLLPVAMALELIHMATLVHDDV--VDASMT 92 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG+PTV ++ V +I G+ Y Q+ S+++ ++ + QG + Sbjct: 93 RRGRPTVKAKWGNVVSIATGD----YLLAKALELLAQINHPEVSKILAEVSVEMS-QGEI 147 Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 Q+ D + Q + K KT L+ +C+ GA+++ A + E L +G LG+ Sbjct: 148 Q-QIKASNDVNQNLKQYYYRIKRKTAMLISASCKLGALISAAPRREVWALGAYGHALGMA 206 Query: 221 FQLADDLLDC 230 FQ+ DD+LD Sbjct: 207 FQIVDDVLDV 216 >gi|159041215|ref|YP_001540467.1| polyprenyl synthetase [Caldivirga maquilingensis IC-167] gi|157920050|gb|ABW01477.1| Polyprenyl synthetase [Caldivirga maquilingensis IC-167] Length = 340 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 29/207 (14%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR +V E A + +AL A +E IH YSLI+DD+ +D +RR PTV Sbjct: 43 GGKRIRPLMVIESALACGGSLESALPYAAIVELIHNYSLIYDDI--IDEADLRRNMPTVR 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +Y + AI+ G + E I ++ +++ T ++ + G+ LDI Sbjct: 101 RKYGDYAAILVG----IWYREAIEEAVLDTRNPSEVARVVAET----IKAIDEGERLDIL 152 Query: 169 DEFIDETQVFMIQ-------------------KMKTGALMCFACESGAIMAHASQNEKER 209 E+ + I+ +KT AL + G A + E Sbjct: 153 MEYSGRRDPYFIENRLVREITPALRDLYIRMISLKTAALFKTSMWLGGYSAKCGNEQLEA 212 Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236 L FG N+G+ FQ+ DD+LD DL K Sbjct: 213 LSNFGYNVGVAFQIIDDVLDIFGDLRK 239 >gi|119964240|ref|YP_948800.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Arthrobacter aurescens TC1] gi|119951099|gb|ABM10010.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Arthrobacter aurescens TC1] Length = 367 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L CA L + + ++ +E H +L HDD+ MD+ RRG PT H Sbjct: 85 GGKRIRPLLTLLCAHLGDASRPEVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAH 142 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + AI+ G+ + A ++S ++ L R+ L L G L + Sbjct: 143 EVWGNSVAILTGDLIFARASILVSELGSRALGIQARTFERLCL-------GQLHETVGPR 195 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +DE E + +I KTG+L+ + + GAI A A ++ ++ L +GE +G+ FQLADD+ Sbjct: 196 EDEDPVEHYLSVIAD-KTGSLVAASGQLGAIFAGADESYEDLLVEYGEKVGVAFQLADDV 254 Query: 228 LDC 230 +D Sbjct: 255 IDV 257 >gi|147669014|ref|YP_001213832.1| polyprenyl synthetase [Dehalococcoides sp. BAV1] gi|289432282|ref|YP_003462155.1| trans-hexaprenyltranstransferase [Dehalococcoides sp. GT] gi|146269962|gb|ABQ16954.1| Polyprenyl synthetase [Dehalococcoides sp. BAV1] gi|288946002|gb|ADC73699.1| Trans-hexaprenyltranstransferase [Dehalococcoides sp. GT] Length = 324 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 14/188 (7%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y L+GGK +R L A F L + + E +H +L+HDD ++D RRG+ Sbjct: 42 YILVGGKVLRPALSMLSAMCFGAGIKKVLPLATSSEMLHIATLVHDD--AIDKADTRRGR 99 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 TV+ + AI+ G+ L ++ N+ + S T LQ + G++ Sbjct: 100 RTVNAVWGLEKAILLGDFLFA-----HAAETAAETGNMGIVTLFSQT----LQIIASGEL 150 Query: 165 LDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 F D++ ++++ KT AL A + GAI+A AS +++E +R +G NLG+ F Sbjct: 151 KQAYASFNPDQSYENYLERISGKTAALFVMATKGGAILADASPSDEEIMRSYGYNLGLSF 210 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 211 QIVDDILD 218 >gi|77461082|ref|YP_350589.1| polyprenyl synthetase [Pseudomonas fluorescens Pf0-1] gi|77385085|gb|ABA76598.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1] Length = 322 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDMRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ + I SQ + LQ + ++ Sbjct: 101 AMWGNAPSVLVGDFLYSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQ------LSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A +A A+ + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALAGATAEQSEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYKGD 219 >gi|329938314|ref|ZP_08287765.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus M045] gi|329302803|gb|EGG46693.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus M045] Length = 336 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVMLAAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAEVRRGVDSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A++ G+ L + A +++ + +R Q + ++ GQ+L+ Sbjct: 111 TRWGNSVAVLTGDFLFSRASHMLADLGPE---AVRIQAE-------AFERLVTGQILETA 160 Query: 169 D--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D + ++ + KTG+L+ AC GA+M+ A + + L +GE LG+ FQLAD Sbjct: 161 GPRDGRDPVEHYLDVLAGKTGSLVAVACRFGAMMSGADETVVDVLTQYGERLGVAFQLAD 220 Query: 226 DLLDCEED 233 D+LD D Sbjct: 221 DVLDIASD 228 >gi|261193789|ref|XP_002623300.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis SLH14081] gi|239588905|gb|EEQ71548.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis SLH14081] Length = 520 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 89/162 (54%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++++ A++AG+ LL A ++ Sbjct: 262 RLAEITELIHTASLLHDDV--IDNAVTRRSAVSANLEFGNKMAVLAGDFLLGRASVALA- 318 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQVFMIQK--MKTGA 187 +L+D +L+ ++ N+ ++G + + ++ F ++T + +QK +K+ + Sbjct: 319 ---RLRDPEVIELLSTVIANL-IEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSAS 374 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + A++ H+S E +G NLG+ FQL DD+LD Sbjct: 375 LISKSCRAAALLGHSSPQIVEAAYSYGRNLGLAFQLVDDMLD 416 >gi|254418195|ref|ZP_05031919.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3] gi|196184372|gb|EDX79348.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3] Length = 324 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 10/183 (5%) Query: 49 GGKKIRSFLVTECASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R L A L+ ++ AA+E IH +L+HDD+ +D +RRGK Sbjct: 41 GGKRLRPLLTVAAARASGTEGDILSPKKLAAAVEFIHTATLLHDDI--VDASELRRGKVA 98 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 H+ + T+++ G+ L AFE++ D++R+ +L+ + +G + Q+ Sbjct: 99 AHLIWGAPTSVLVGDFLFARAFELMVE-----TDSMRALGILAQASRVISEGEVL-QLTR 152 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D +D+ I KT L A E+GA+ A A LR +G LGI FQLADD Sbjct: 153 AHDLNLDQATYLQIISAKTAELFAAAAEAGAVGAGADAAATAALRDYGMALGIAFQLADD 212 Query: 227 LLD 229 LD Sbjct: 213 ALD 215 >gi|262275074|ref|ZP_06052885.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] gi|262221637|gb|EEY72951.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] Length = 323 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPMLAVLSGRALGYQGEGHITAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L+ ++R ++S N+ +G + Q+++ Sbjct: 101 AMFGNAASVLVGDYIYTRSFQMM----TELR-SLRILDLMSKATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+A AS+ + ++ +G LG FQL DD++ Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILADASEEIETAMQDYGRYLGTAFQLIDDVM 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|71278535|ref|YP_271161.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H] gi|71144275|gb|AAZ24748.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H] Length = 327 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A F L + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRMRPMLTVLAARAFAYQGDKHLEIAAIIEFIHTATLLHDDV--VDESNMRRGRETAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L D +R +LS NI +G + Q+++ Sbjct: 105 ALFGNSASVLVGDFLYTRSFQMM----TKLGD-MRIMDILSEATNIVAEGEVL-QLMNCN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++A ++ + +G+ LG FQL DD++ Sbjct: 159 DASTTEESYMQVIYCKTAKLFEAATRLAAVIAKQDAKIEQAMADYGKYLGTAFQLVDDIM 218 Query: 229 DCEED 233 D D Sbjct: 219 DYTAD 223 >gi|24215915|ref|NP_713396.1| geranylgeranyl pyrophosphate synthase [Leptospira interrogans serovar Lai str. 56601] gi|24197125|gb|AAN50414.1| geranylgeranyl pyrophosphate synthase [Leptospira interrogans serovar Lai str. 56601] Length = 319 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%) Query: 15 RIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHL 70 ++ + D L+ + ++T + + ++LS I+ + GGK+IR L L + Sbjct: 2 KVSVLKDSLIRKFDKKLETIIREDLKILSEIKTYTIQSGGKRIRPILHYCLCQLLGYSGK 61 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 L VGA E IH SL+HDD+ +D RRG +V ++ TAI+AG+ LL + Sbjct: 62 HWLDVGAIAELIHAASLLHDDV--VDEAETRRGLQSVGSKFGNKTAILAGDYLLACGIDH 119 Query: 131 ISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTGA 187 ++ + +Q++ LS++ I ++ ++ LDI ++ I KT + Sbjct: 120 LNGLGYPELMEVFTQVIKDLSVSELIQMEWEKNPKITLDIYNKII---------YGKTAS 170 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L C S I++ ++ EK++LR FG +LG FQ DD +D Sbjct: 171 LFAVVCVSAGILSDKNEKEKKKLRQFGIDLGSFFQKKDDAID 212 >gi|254391153|ref|ZP_05006360.1| isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294814410|ref|ZP_06773053.1| Isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|326442800|ref|ZP_08217534.1| putative polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|197704847|gb|EDY50659.1| isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294327009|gb|EFG08652.1| Isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 336 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 15/184 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG P+ + Sbjct: 53 GGKRFRPLLVMLAAQFGDPYSPGVVPAAVVMELTHLATLYHDDV--MDEADVRRGVPSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A++ G+ L A I++ + +R Q + ++ GQ+L+ Sbjct: 111 ARWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILETA 160 Query: 169 D--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E D + ++ + KTG+L+ + GA+MA A + + L +GE LG+ FQLAD Sbjct: 161 GPREGGDPIEHYLDVIGGKTGSLIAVSGRIGAMMAGADERIVDTLTQYGERLGVAFQLAD 220 Query: 226 DLLD 229 D+LD Sbjct: 221 DVLD 224 >gi|89894978|ref|YP_518465.1| hypothetical protein DSY2232 [Desulfitobacterium hafniense Y51] gi|89334426|dbj|BAE84021.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 322 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 8/190 (4%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 SA++ GGK++R + L V A+E IH +L+HDD+ +D Sbjct: 35 SAVQLLEAGGKRLRPAFTLLAGKFYGYPIDRLLPVAMALELIHMATLVHDDV--VDASMT 92 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG+PTV ++ V +I G+ Y Q+ S+++ ++ + QG + Sbjct: 93 RRGRPTVKAKWGNVVSIATGD----YLLAKALELLAQINHPEVSKILAEVSVEMS-QGEI 147 Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 Q+ D + Q + K KT L+ +C+ GA+++ A + E L +G LG+ Sbjct: 148 Q-QIKASNDVNQNLKQYYYRIKRKTAMLISASCKLGALVSAAPRREVWALGAYGHALGMA 206 Query: 221 FQLADDLLDC 230 FQ+ DD+LD Sbjct: 207 FQIVDDVLDV 216 >gi|152992234|ref|YP_001357955.1| polyprenyl synthetase [Sulfurovum sp. NBC37-1] gi|151424095|dbj|BAF71598.1| polyprenyl synthetase [Sulfurovum sp. NBC37-1] Length = 298 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 22/187 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R+ L+ + A N L+ ++ A +E IH SL+HDD+ +D+ Y RR KP+++ Sbjct: 31 GKRLRAKLILKIAG----NGLSVVKTAAVVEMIHAASLLHDDV--IDDAYTRRSKPSLNA 84 Query: 110 QYDEVTAIIAGNGLLTYAF-EI--ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 Y TAI+ G+ L + F E+ ISS ++ N +QL L ++ L + Sbjct: 85 LYGNKTAIMLGDILYSKGFFELNNISSEVAKIVSNAVTQLSLGELKDVSLSKIFNTD--- 141 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++ ++D MI + KT +L+ + A + KE +G NLG+ FQ+ DD Sbjct: 142 -KEIYLD-----MIYQ-KTASLIEASA---GAAAVLAGKPKEAYMTYGRNLGMAFQMIDD 191 Query: 227 LLDCEED 233 LLD D Sbjct: 192 LLDITSD 198 >gi|45656805|ref|YP_000891.1| octaprenyl diphosphate synthase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600041|gb|AAS69528.1| octaprenyl diphosphate synthase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 319 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%) Query: 15 RIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHL 70 ++ + D L+ + ++T + + ++LS I+ + GGK+IR L L + Sbjct: 2 KVSVLKDSLIRKFDKKLETIIREDLKILSEIKTYTIQSGGKRIRPILHYCLCQLLGYSGK 61 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 L VGA E IH SL+HDD+ +D RRG +V ++ TAI+AG+ LL + Sbjct: 62 HWLDVGAIAELIHAASLLHDDV--VDEAETRRGLQSVGSKFGNKTAILAGDYLLACGIDH 119 Query: 131 ISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTGA 187 ++ + +Q++ LS++ I ++ ++ LDI ++ I KT + Sbjct: 120 LNGLGYPELMEVFTQVIKDLSVSELIQMEWEKNPKITLDIYNKII---------YGKTAS 170 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L C S I++ ++ EK++LR FG +LG FQ DD +D Sbjct: 171 LFAVVCVSAGILSDKNEKEKKKLRQFGIDLGSFFQKKDDAID 212 >gi|23099243|ref|NP_692709.1| heptaprenyl diphosphate synthase component II [Oceanobacillus iheyensis HTE831] gi|22777472|dbj|BAC13744.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Oceanobacillus iheyensis HTE831] Length = 323 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V + L N + +V +E IH +L+HDD+ +D +RRGKPT Sbjct: 43 GGKRIRPVFVLLSSQLGNYDLSKIKKVAVTLELIHMATLVHDDV--IDEAELRRGKPTTA 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y A+ G+ +L A E I T++ D QL+ + + G++ I+ Sbjct: 101 SIYGNRVAMYTGDYILARALEEI----TEIPDPRVHQLLSKTLVEVSI-----GEIEQIE 151 Query: 169 DEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +F E ++ + K KT L+ +C+ GAI+ + + +L +G +G+ +Q+ D Sbjct: 152 YKFNWEQNFRDYLRRIKRKTALLIASSCKLGAIVGGLNDYQTNKLYQYGYYIGMSYQIID 211 Query: 226 DLLD 229 D+LD Sbjct: 212 DILD 215 >gi|71383196|ref|XP_802138.1| farnesyl synthetase [Trypanosoma cruzi strain CL Brener] gi|70846534|gb|EAN80692.1| farnesyl synthetase, putative [Trypanosoma cruzi] Length = 292 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 13/162 (8%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 LR+G E +H +L+HDD+ MDN RRG+PTVH YD A++AG+ LL A I+ Sbjct: 55 LRLGEITELLHTATLVHDDV--MDNSNTRRGQPTVHCLYDAKRAVLAGDFLLARASIWIA 112 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 + + R L++S L+ + G+M+ + D D KT +L+ + Sbjct: 113 A-----LGHSRVVLLMS----TALEDLAAGEMMQM-DGCFDIESYEQKSYCKTASLIANS 162 Query: 193 CESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 S A++A E FG++LGI FQ+ DD LD D Sbjct: 163 LASTAVLAGLPNTAYEEAAAKFGKHLGIAFQIVDDCLDITGD 204 >gi|258592999|emb|CBE69310.1| Polyprenyl synthetase [NC10 bacterium 'Dutch sediment'] Length = 325 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 30/204 (14%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYI 100 IRY L GGK++R L+ A L N + + + E +H +LIHDD+ +D Sbjct: 36 IRYVLKSGGKRVRPALLLLSAKLCGYNGGSRHIDLAVVAEYMHAATLIHDDI--IDRADK 93 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG P+ + + +++AG+ L + +++ I L + M+ Sbjct: 94 RRGLPSANSTWGSQISVLAGDFLYARSLQMLV---------IDGDLAVMRAFADATVRMI 144 Query: 161 GGQMLDIQ---------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ+ ++Q DE++D I KT AL+ AC +GA++A E L Sbjct: 145 EGQVREVQMAGNLDLTYDEYLD------IITSKTAALISVACRTGALIAGRQPEEVAALT 198 Query: 212 CFGENLGIIFQLADDLLD--CEED 233 FG ++GI FQL DD LD EED Sbjct: 199 EFGLDVGIAFQLVDDALDFVAEED 222 >gi|170103887|ref|XP_001883158.1| predicted protein [Laccaria bicolor S238N-H82] gi|164642039|gb|EDR06297.1| predicted protein [Laccaria bicolor S238N-H82] Length = 434 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 18/171 (10%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T LR+ +E +H SL+HDD+ +D +RRG P+ ++ +++ GN +L A Sbjct: 164 TQLRLAQIVEMLHTASLLHDDV--IDASPLRRGAPSAPSKFGSKLSVLGGNFILGRA--- 218 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQK-- 182 S+ +L D +QL+ S+ N+ +L QM D++D+ + +QK Sbjct: 219 -STALARLGDAEVTQLIASVISNLVEGEIL--QMRDVKDKDVGVEGKTKNAWTVYLQKTY 275 Query: 183 MKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDCE 231 +KT +LM S ++ + E K+ +G NLGI FQL DD+LD E Sbjct: 276 LKTASLMAKGARSAVVLGGCEEGEVWKDIAYAYGRNLGIAFQLIDDILDYE 326 >gi|71403571|ref|XP_804573.1| farnesyl synthetase [Trypanosoma cruzi strain CL Brener] gi|14582479|gb|AAK69519.1|AF282771_1 solanesyl diphosphate synthase [Trypanosoma cruzi] gi|70867614|gb|EAN82722.1| farnesyl synthetase, putative [Trypanosoma cruzi] gi|258676433|gb|ACV87213.1| solanesyl diphosphate synthase [Trypanosoma cruzi] gi|258676435|gb|ACV87214.1| solanesyl diphosphate synthase [Trypanosoma cruzi] Length = 363 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 13/162 (8%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 LR+G E +H +L+HDD+ MDN RRG+PTVH YD A++AG+ LL A I+ Sbjct: 114 LRLGEITELLHTATLVHDDV--MDNSNTRRGQPTVHCLYDTKRAVLAGDFLLARASIWIA 171 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 + + R L++S L+ + G+M+ + D D KT +L+ + Sbjct: 172 A-----LGHSRVVLLMS----TALEDLAAGEMMQM-DGCFDIESYEQKSYCKTASLIANS 221 Query: 193 CESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 S A++A E FG++LGI FQ+ DD LD D Sbjct: 222 LASTAVLAGLPNTAYEEAAAKFGKHLGIAFQIVDDCLDITGD 263 >gi|303229377|ref|ZP_07316167.1| polyprenyl synthetase [Veillonella atypica ACS-134-V-Col7a] gi|302515913|gb|EFL57865.1| polyprenyl synthetase [Veillonella atypica ACS-134-V-Col7a] Length = 323 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 14/187 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R+ L A+ +++ A+E +H +LIHDD+ +D IRRG+ T+H Sbjct: 46 GGKRLRAQLCLLIANAGTSVEAERIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEETIH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 AI++G+ L AF I+S I S ++ L G+ + ++ Sbjct: 104 KHKGNKVAILSGDYLFAKAFRIVSEMPHMEYLKIFSHIITCLVE---------GEFMQME 154 Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + ID+ +M + K A C E G ++ S +E L+ +G LG+ FQ+ D Sbjct: 155 DVYRIDQGIDRYMTKTQKKTADFMEGCMELGGLLGGWSSDEIMYLKRYGHALGMAFQITD 214 Query: 226 DLLDCEE 232 D++D E Sbjct: 215 DIMDYRE 221 >gi|17547542|ref|NP_520944.1| octaprenyl-diphosphate synthase [Ralstonia solanacearum GMI1000] gi|17429846|emb|CAD16530.1| probable octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum GMI1000] Length = 322 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPVILLLMANALGYRGQHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ D++R +L+ N+ +G + Q+L++ Sbjct: 101 AVFGNAASVLVGDFLYSRAFQMMVQ-----ADSMRVMQILADATNVISEGEVL-QLLNMH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + + KT L A + GA+++ A + +G +G FQ+ DDLL Sbjct: 155 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|312200053|ref|YP_004020114.1| polyprenyl synthetase [Frankia sp. EuI1c] gi|311231389|gb|ADP84244.1| Polyprenyl synthetase [Frankia sp. EuI1c] Length = 333 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 19/187 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R +V A + ++ AAIE H +L HDD+ MD +RRG + + Sbjct: 54 GGKRFRPMVVLLAAHFADPAAPEVIQAAAAIELTHLSTLYHDDV--MDEAPLRRGAASAN 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ AI+ G+ L A EI + P+ I +Q + +L GQ+ + Sbjct: 112 ARWTNTVAILVGDYLFARASEITADLGPEAT---RILAQTIATLCE---------GQIRE 159 Query: 167 IQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D+ V + KT +L+ + GA+M+ A + L FGE +G+ FQL Sbjct: 160 TVGPMPDDDPVEHYLRVVTGKTASLIAASGRLGAMMSGADPVTADILATFGERIGVCFQL 219 Query: 224 ADDLLDC 230 +DD++D Sbjct: 220 SDDIIDV 226 >gi|309753120|gb|ADO85577.1| PntB [Streptomyces arenae] Length = 337 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 11/187 (5%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A AL A+E +H +SL+HDDL MD RR + TV Sbjct: 53 GKAVRPALALLSAEAVGAAPEVALPGAVAVELVHNFSLVHDDL--MDGDEERRHRRTVWK 110 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + +AI+ G+ +L A E++ L + + + + ++ GQ+ D+ Sbjct: 111 LWGPSSAILTGDAMLALAQEVL------LDTGLPTAASAARLLARTTRHLIRGQVQDLAF 164 Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 Q + + + KTGAL+ + GA++A A + + L +G+ +G+ FQL DD Sbjct: 165 EQRSHVTVEECVDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDD 224 Query: 227 LLDCEED 233 +L D Sbjct: 225 VLGIWGD 231 >gi|284165809|ref|YP_003404088.1| dimethylallyltranstransferase [Haloterrigena turkmenica DSM 5511] gi|284015464|gb|ADB61415.1| Dimethylallyltranstransferase [Haloterrigena turkmenica DSM 5511] Length = 349 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 28/221 (12%) Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIR-SFLVTECASLFNV---------------NHLTA 72 + Q +RL A RY L GGK++R + L+T SL +V N + Sbjct: 29 ELPIQRPERLYEASRYLLDAGGKRLRPTVLLTVAESLLDVEPLSTDYREFPTLNGNRIDI 88 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + ++E I ++LIH MD+ +RRG P VH +YD TAI+AG+ L + AFEI+ Sbjct: 89 MDAAVSVEVIQSFTLIH--DDIMDDDDLRRGVPAVHKEYDLETAILAGDTLYSKAFEIML 146 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFID---ETQVFMIQKMKTGAL 188 + ++ + +L+ T + GQ LD+ +E D E + M+++ KT L Sbjct: 147 ETGAKPDRSVEALNVLATT----CTKICEGQSLDVTFEERADVSPEEYLEMVEQ-KTAVL 201 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + AI+ A + + L +G ++G FQ+ DD+LD Sbjct: 202 YAASACLPAILLGADEETIDALYGYGLDIGRAFQIQDDVLD 242 >gi|223943155|gb|ACN25661.1| unknown [Zea mays] Length = 413 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L ++ LTA R+ IE IH SLIHDD+ +D+ +RR Sbjct: 131 GGKRLRPALVFLVSRATAELAGLSELTAEHRRLAEIIEMIHTASLIHDDV--IDDSGMRR 188 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK T+H Y A++AG+ + + ++ N+ + ++ L + ++ G Sbjct: 189 GKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------NLENIEVIKLISQV-IKDFASG 239 Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F I + KT +L+ + +S +I + S E++ +G NLG+ Sbjct: 240 EIKQASTLFDCDITLDDYLLKSYYKTASLIAASTKSASIFSGVSTTICEKMYAYGRNLGL 299 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 300 SFQVVDDILD 309 >gi|242813946|ref|XP_002486271.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Talaromyces stipitatus ATCC 10500] gi|218714610|gb|EED14033.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Talaromyces stipitatus ATCC 10500] Length = 465 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 90/166 (54%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + + Q+ A++AG+ LL A ++ Sbjct: 207 RLAEITELIHTASLLHDDV--IDNAVTRRSSSSANTQFGNKMAVLAGDFLLGRASVALA- 263 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE----FIDETQVFMIQK--M 183 +L++ +L+ ++ N ++ G+ + ++ DE F D+T + +QK + Sbjct: 264 ---RLRNPEVIELLATVIAN-----LVEGEFMQLKNTASDERSPVFTDDTITYYLQKTYL 315 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ +C + A++ +++ + E +G NLG+ FQL DD+LD Sbjct: 316 KTASLISKSCRAAALLGNSTPDIVEAAYSYGRNLGLAFQLVDDMLD 361 >gi|34496302|ref|NP_900517.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC 12472] gi|34102155|gb|AAQ58522.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC 12472] Length = 309 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 30 GGKRLRPILTLLSGRALGYRGEHLFELAAMIEFIHTATLLHDDV--VDESDLRRGRKTAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AF+++ + + N+ +++ NI +G + Q+L+I Sbjct: 88 ALFGNAASVLVGDFLYTRAFQMMVTTR-----NMTILEVMAEATNIIAEGEVL-QLLNIG 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + E + + + KT L A GA++A AS + + +G LG FQ+ DD+L Sbjct: 142 NTDVSEDEYLKVIQYKTAKLFEAAARVGALIADASAEQVRAMADYGMYLGTAFQIIDDVL 201 Query: 229 DCEED 233 D D Sbjct: 202 DYSGD 206 >gi|120599984|ref|YP_964558.1| trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1] gi|146292082|ref|YP_001182506.1| trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32] gi|120560077|gb|ABM26004.1| Trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1] gi|145563772|gb|ABP74707.1| Trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32] Length = 331 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPLLSVLAARTVSYEGDAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L DN+R +L+ T N+ +G + Q+++ Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DNMRVLRVLADTTNVLAEGEVL-QLMNCN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++A AS ++ L +G+ LG FQL DDLL Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASTEQETALGNYGKYLGTAFQLTDDLL 222 Query: 229 DCEED 233 D D Sbjct: 223 DYTAD 227 >gi|228990628|ref|ZP_04150593.1| Heptaprenyl diphosphate synthase component 2 [Bacillus pseudomycoides DSM 12442] gi|228996726|ref|ZP_04156363.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides Rock3-17] gi|228763045|gb|EEM11955.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides Rock3-17] gi|228769154|gb|EEM17752.1| Heptaprenyl diphosphate synthase component 2 [Bacillus pseudomycoides DSM 12442] Length = 320 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 25/229 (10%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR- 74 ID I +L AS Q + +A++ GGK+IR V A F L A++ Sbjct: 14 IDVIEKELKKVVASEQQLIED----AALQLIEAGGKRIRPVFVL-LAGKFGDYKLDAIKH 68 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V A+E IH SL+HDD+ +D +RR TV+ ++ + A+ G+ L + E I++ Sbjct: 69 VAVALELIHMASLVHDDV--IDAALLRRSSATVNAKWGDRIAMYTGDYLFAKSLECITNL 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ----KMKTGALMC 190 + S +L + G++ I+D++ D Q K KT L+ Sbjct: 127 EVPEAHQALSYTILEVCK---------GEIEQIKDKY-DYNQNLRTYLRRIKRKTALLIA 176 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 +C+ GAI + AS++ RL +G +G+ +Q+ DD+LD EE L K Sbjct: 177 ASCQLGAIASGASRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGK 225 >gi|227873689|ref|ZP_03991923.1| possible Farnesyltranstransferase [Oribacterium sinus F0268] gi|227840478|gb|EEJ50874.1| possible Farnesyltranstransferase [Oribacterium sinus F0268] Length = 175 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 56/82 (68%), Gaps = 2/82 (2%) Query: 150 LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L + G++GM+GGQ+LDI+ + + E ++F I K KT AL+ + E GA++ A+ E+ Sbjct: 19 LAKSAGIEGMIGGQVLDIEKTGQPLTEEELFFIYKKKTAALLSASLEIGALLGGANPEEQ 78 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 E+L FGE +G+ FQ+ DD+LD Sbjct: 79 EKLSSFGEKIGLAFQIRDDILD 100 >gi|325577651|ref|ZP_08147926.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC 33392] gi|325160396|gb|EGC72522.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC 33392] Length = 331 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A +E IH SL+HDD+ +D +RRG+ T + Sbjct: 51 GGKRIRPLIAVLAARALGYESDKVATCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++ + Q D +R +++ N+ +G + Q++++ Sbjct: 109 SAFGNAASVLVGDFIYTRAFQLVA--QLQSLDILR---IMADATNVLAEGEVQ-QLMNVN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A +S AI+A A ++ + + +G LG FQL DD+L Sbjct: 163 DPDTTEESYMRVIYSKTARLFEVAAQSVAIVAGAEKSIETAFQEYGRYLGTAFQLVDDVL 222 Query: 229 D 229 D Sbjct: 223 D 223 >gi|254491038|ref|ZP_05104219.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010] gi|224463551|gb|EEF79819.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010] Length = 322 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A + + IE IH +L+HDD+ +DN +RRGK T + Sbjct: 43 GGKRLRPAIAILSAKACGYEGDKHINLATIIEFIHTATLLHDDV--VDNSAMRRGKETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +FE++ D++R +LS T NI +G + Q+L+ Sbjct: 101 NLWGNEASVLVGDFLYTRSFEMMVE-----MDSMRLMRILSSTTNIIAEGEVL-QLLNCH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L A + GA+++ ++ + ++ + + +LG FQL DDLL Sbjct: 155 DADTTEARYLEVIHHKTAKLFEAAGQLGAVISRSADDIEQAMARYAMHLGSAFQLVDDLL 214 Query: 229 DCEE 232 D + Sbjct: 215 DYSQ 218 >gi|168701670|ref|ZP_02733947.1| polyprenyl synthase [Gemmata obscuriglobus UQM 2246] Length = 348 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 23/187 (12%) Query: 50 GKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GK++R L+ C + +H A AA+E IH +L+HDD+ +D +RR P Sbjct: 71 GKRLRPALLLLTAEACGGVAPAHHTLA----AAMEMIHTATLVHDDV--LDEADVRRHAP 124 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T + +I+ G+ L T+AF + S+ D Q+ +T+ + G++ Sbjct: 125 TFRAGWGNKVSILLGDMLFTHAFHLTST-----VDGRACQITGEVTNRV-----CAGELR 174 Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + + + E F + KT AL GA+ A AS+ ++ +G ++G+ FQ Sbjct: 175 QVTERGNLELSEADYFAVIDGKTAALTECCGRLGALYAGASEEVAAKMASYGRSVGLAFQ 234 Query: 223 LADDLLD 229 +ADDLLD Sbjct: 235 IADDLLD 241 >gi|118431580|ref|NP_148152.2| farnesylgeranyl diphosphate synthase [Aeropyrum pernix K1] gi|116062905|dbj|BAA80767.2| farnesylgeranyl diphosphate synthase [Aeropyrum pernix K1] Length = 332 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 9/193 (4%) Query: 49 GGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R + A + A+ + A+IE H +SLIHDD+ MD +RRG PT Sbjct: 43 GGKRLRPLITLLTARMLGGLEAEARAIPLAASIETAHTFSLIHDDI--MDRDEVRRGVPT 100 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 H+ Y + AI+AG+ L AF++I+ + + ++ + +Q + GQ D Sbjct: 101 THVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLSEAAIQ-ISRGQAYD 159 Query: 167 I---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + + +D + ++KTGAL+ A GA+ A A ++ + G N GI FQ+ Sbjct: 160 MLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAAGAGSEIEKMMGEVGMNAGIAFQI 219 Query: 224 ADDLLDCEEDLPK 236 DD+L D PK Sbjct: 220 RDDILGVIGD-PK 231 >gi|298369461|ref|ZP_06980778.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str. F0314] gi|298282018|gb|EFI23506.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str. F0314] Length = 324 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIITILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRETAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + + ++ +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MKILEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E Q + + KT L A + GAI+ A+ +++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEKQYIQVIQYKTAKLFEAAAQVGAILGGANPAQEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|145590446|ref|YP_001152448.1| polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514] gi|145282214|gb|ABP49796.1| Polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 334 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 98/219 (44%), Gaps = 31/219 (14%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D A+ Y L GGK++R L A + AL A +E IH YSLI+DD+ + Sbjct: 29 DDFHEAVLYQLKTGGKRLRPLLTLATAEAVSGRWEPALPAAAIVELIHNYSLIYDDI--I 86 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNI 154 D G +RRG PTV + + AI+ G E ++ +PK L+ + Sbjct: 87 DRGDVRRGMPTVRKAFGDNAAILIGIWYREAIEEAVLETPKP---------LVFAREVAK 137 Query: 155 GLQGMLGGQMLDI-------QDEFIDETQ---------VFMIQKMKTGALMCFACESGAI 198 ++ + G+ LDI D + + + V M+ +KTG L+ A + G + Sbjct: 138 VIKAIDEGERLDILFECAGRSDPYFAKARWKEVTLDDYVKMVS-LKTGVLIAAAAKWGVL 196 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 + E FG N GI FQ+ DD+LD D PKK Sbjct: 197 SVSDDGDLAEAAWNFGLNAGIAFQIIDDVLDIYGD-PKK 234 >gi|303231368|ref|ZP_07318102.1| polyprenyl synthetase [Veillonella atypica ACS-049-V-Sch6] gi|302513964|gb|EFL55972.1| polyprenyl synthetase [Veillonella atypica ACS-049-V-Sch6] Length = 323 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 14/187 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R+ L A+ +++ A+E +H +LIHDD+ +D IRRG+ T+H Sbjct: 46 GGKRLRAQLCLLIANAGTSVEAERIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEETIH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 AI++G+ L AF I+S I S ++ L G+ + ++ Sbjct: 104 KHKGNKVAILSGDYLFAKAFRIVSEMPHMEYLKIFSHIITCLVE---------GEFMQME 154 Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + ID+ +M + K A C E G ++ S +E L+ +G LG+ FQ+ D Sbjct: 155 DVYRIDQGIDRYMTKTQKKTADFMEGCMELGGLLGGWSSDEIMYLKRYGHALGMAFQITD 214 Query: 226 DLLDCEE 232 D++D E Sbjct: 215 DIMDYRE 221 >gi|323481190|gb|ADX80629.1| polyprenyl synthetase family protein [Enterococcus faecalis 62] Length = 326 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 16/209 (7%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + T++ D + + A GGK +R FL + L++ A++E +H +L Sbjct: 26 LHTRNEDIEEALVSLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D+ +RRG T+ QY + A+ G+ L T F +I+ D + Sbjct: 86 IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204 + + G++ +L G++ + F + + KTG L +C GA H+S+ Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTGELFSLSCLEGAYFGHSSK 195 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + G ++GI FQ+ DD+LD D Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224 >gi|301154821|emb|CBW14284.1| octaprenyl diphosphate synthase [Haemophilus parainfluenzae T3T1] Length = 331 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A +E IH SL+HDD+ +D +RRG+ T + Sbjct: 51 GGKRIRPLIAVLAARALGYESDKVATCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++ + Q D +R +++ N+ +G + Q++++ Sbjct: 109 SAFGNAASVLVGDFIYTRAFQLVA--QLQSLDILR---IMADATNVLAEGEVQ-QLMNVN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A +S AI+A A ++ + + +G LG FQL DD+L Sbjct: 163 DPDTTEESYMRVIYSKTARLFEVAAQSVAIVAGAEKSIETAFQEYGRYLGTAFQLVDDVL 222 Query: 229 D 229 D Sbjct: 223 D 223 >gi|207744381|ref|YP_002260773.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum IPO1609] gi|206595786|emb|CAQ62713.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum IPO1609] Length = 338 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 73 GGKRLRPVILLLMANALGYRGNHHYELAAVVEFIHTAALLHDDV--VDESELRRGRQTAN 130 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ D++R +L+ N+ +G + Q+L++ Sbjct: 131 AVFGNAASVLVGDFLYSRAFQMMVQ-----ADSMRVMQILADATNVISEGEVL-QLLNMH 184 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + + KT L A + GA+++ A + +G +G FQ+ DDLL Sbjct: 185 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLL 244 Query: 229 D 229 D Sbjct: 245 D 245 >gi|207721484|ref|YP_002251924.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum MolK2] gi|206586644|emb|CAQ17230.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum MolK2] Length = 352 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 73 GGKRLRPVILLLMANALGYRGNHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 130 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ D++R +L+ N+ +G + Q+L++ Sbjct: 131 AVFGNAASVLVGDFLYSRAFQMMVQ-----ADSMRVMQILADATNVISEGEVL-QLLNMH 184 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + + KT L A + GA+++ A + +G +G FQ+ DDLL Sbjct: 185 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLL 244 Query: 229 D 229 D Sbjct: 245 D 245 >gi|145355263|ref|XP_001421884.1| chloroplast Clp protease, subunit of ClpP peptidase complex [Ostreococcus lucimarinus CCE9901] gi|144582123|gb|ABP00178.1| chloroplast Clp protease, subunit of ClpP peptidase complex [Ostreococcus lucimarinus CCE9901] Length = 311 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 19/198 (9%) Query: 49 GGKKIRSFLV----TECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R LV A L +++ +T R+ E IH SL+HDD+ +D+ RR Sbjct: 30 GGKRLRPVLVFLVARATAELMHMSDITDRQRRLAEITEMIHTASLVHDDV--LDDCDTRR 87 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGLQGMLG 161 GK T+H Y AI+AG+ L + +++ + SQ++ I G L Sbjct: 88 GKETIHTLYGARVAILAGDFLFAQSSWFLANLDNLEVIKLISQVIADFADGEISQAGALF 147 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 L + DE+++++ KT +L+ +C+S A+ + +++ K + +G++LG+ F Sbjct: 148 NCDLTL-DEYLEKSH------NKTASLIAASCKSAAVFSEVTESVKVDMYEYGKHLGLAF 200 Query: 222 QLADDLLD---CEEDLPK 236 Q+ DD+LD EE L K Sbjct: 201 QVVDDILDFTQSEEQLGK 218 >gi|126348100|emb|CAJ89821.1| putative polyprenyl diphosphate synthase [Streptomyces ambofaciens ATCC 23877] Length = 354 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 10/189 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + A+E +H +SL+HDD+ MD RR +P V Sbjct: 65 GGKGVRQALAVLGAEAAGASGRAGVPAAVAVELVHAFSLLHDDI--MDGDPDRRRRPAVW 122 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQM 164 Y A++AG+ L A E ++ R+ +LS N ++G +L + Sbjct: 123 KAYGTGPAVLAGDALFALAVETLAVAPA----GPRTVRLLSTALNDLVRGQADDLLFAER 178 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E + + + + KTG+L+ A GA++ A + L G LG+ FQ+ Sbjct: 179 PWTGPERVRPHEYRAMAEHKTGSLLGCAAAMGAVLGGAPRTTVTALDRAGRQLGVAFQVV 238 Query: 225 DDLLDCEED 233 DD+L D Sbjct: 239 DDVLGIWGD 247 >gi|6682999|dbj|BAA88983.1| farnesylgeranyl diphosphate synthase [Aeropyrum pernix] Length = 318 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 9/193 (4%) Query: 49 GGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R + A + A+ + A+IE H +SLIHDD+ MD +RRG PT Sbjct: 29 GGKRLRPLITLLTARMLGGLEAEARAIPLAASIETAHTFSLIHDDI--MDRDEVRRGVPT 86 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 H+ Y + AI+AG+ L AF++I+ + + ++ + +Q + GQ D Sbjct: 87 THVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLSEAAIQ-ISRGQAYD 145 Query: 167 I---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + + +D + ++KTGAL+ A GA+ A A ++ + G N GI FQ+ Sbjct: 146 MLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAAGAGSEIEKMMGEVGMNAGIAFQI 205 Query: 224 ADDLLDCEEDLPK 236 DD+L D PK Sbjct: 206 RDDILGVIGD-PK 217 >gi|194703306|gb|ACF85737.1| unknown [Zea mays] gi|194703680|gb|ACF85924.1| unknown [Zea mays] gi|194704700|gb|ACF86434.1| unknown [Zea mays] gi|223946673|gb|ACN27420.1| unknown [Zea mays] Length = 424 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L ++ LTA R+ IE IH SLIHDD+ +D+ +RR Sbjct: 142 GGKRLRPALVFLVSRATAELAGLSELTAEHRRLAEIIEMIHTASLIHDDV--IDDSGMRR 199 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK T+H Y A++AG+ + + ++ N+ + ++ L + ++ G Sbjct: 200 GKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------NLENIEVIKLISQV-IKDFASG 250 Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F I + KT +L+ + +S +I + S E++ +G NLG+ Sbjct: 251 EIKQASTLFDCDITLDDYLLKSYYKTASLIAASTKSASIFSGVSTTICEKMYAYGRNLGL 310 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 311 SFQVVDDILD 320 >gi|317050825|ref|YP_004111941.1| polyprenyl synthetase [Desulfurispirillum indicum S5] gi|316945909|gb|ADU65385.1| Polyprenyl synthetase [Desulfurispirillum indicum S5] Length = 326 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 9/182 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV + L + A+++G IE IH +L+HDD+ +D +RRG+ + + Sbjct: 43 GGKRIRPLLVLLTSKLCGGDERRAIKIGGIIEYIHTATLLHDDV--IDEACVRRGRDSAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ I+ G+ L + AF+++ + + R Q LS + +G + Q++ Sbjct: 101 FKFGNEMVILVGDYLYSKAFQVLVA-----DGDPRVQKTLSDVTTLMSEGEV-FQLVKSF 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDL 227 D + F I + KT L+ + G A S+ + L FG N+G+ FQL DD+ Sbjct: 155 DFSVTLEDYFQIIEHKTAILIAACAKCGGYTAPDLSEEMADALWDFGYNIGMAFQLIDDI 214 Query: 228 LD 229 LD Sbjct: 215 LD 216 >gi|239908218|ref|YP_002954959.1| octaprenyl-diphosphate synthase [Desulfovibrio magneticus RS-1] gi|239798084|dbj|BAH77073.1| octaprenyl-diphosphate synthase [Desulfovibrio magneticus RS-1] Length = 322 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 15/198 (7%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N + +R+ LL GGK++R L A + ++E +H +L+HDD+ Sbjct: 27 NPMVQPVVRHVLLAGGKRLRPLLTILTARAMGYRADDVYPLACSLEFLHSATLLHDDI-- 84 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +D +RRG+ + H+++ I+AG+ LL A +++ DN +LS Sbjct: 85 LDGAKLRRGRESAHVRFGSTHTILAGDVLLALANRLVAE-----YDNPELTKLLSE---- 135 Query: 155 GLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 L G++L+I +D + F I KT L+ +C+ GA++A AS + Sbjct: 136 ALLQTATGEILEIAHLRDVDLPLDTYFSIITGKTAYLIQASCQCGAVLAGASPRLIQAAA 195 Query: 212 CFGENLGIIFQLADDLLD 229 G ++G+ FQL DD LD Sbjct: 196 DLGHHIGVAFQLVDDALD 213 >gi|154251178|ref|YP_001412002.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1] gi|154155128|gb|ABS62345.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1] Length = 339 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + L N +++ A +E +H +L+HDD+ +D +RRG T Sbjct: 58 GGKRLRPMLTIAASRLCGYNGTDHIKLAATVEFLHTATLLHDDV--VDESDMRRGAKTAR 115 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+++ K+ +R+ +++ ++ +G + Q+ + Sbjct: 116 MLWGNQASVLVGDFLLGRAFKLMVETKS-----LRALEIIADAASVIAEGEVM-QLAAAK 169 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT AL A E GA+++ + +E L +G NLGI FQL DD L Sbjct: 170 DTGTTEDAYLRVIQAKTAALFAAATEIGAVISEKNGSEAAALESYGRNLGIAFQLVDDAL 229 Query: 229 D 229 D Sbjct: 230 D 230 >gi|290473433|ref|YP_003466299.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004] gi|289172732|emb|CBJ79503.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004] Length = 323 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 8/178 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + ++V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAGKALHCEKEKHIKVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AMYGNAASVLVGDFIYTRSFQMMTD-----LDSMRVLKLMSDATNVIAEGEVM-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D E + KT L A S AI++ A+ ++ LR +G LG FQL DD Sbjct: 155 DPDTSEDDYMRVIYSKTARLFEVAAHSAAILSGATPEQEAALRDYGRYLGTAFQLIDD 212 >gi|148655833|ref|YP_001276038.1| polyprenyl synthetase [Roseiflexus sp. RS-1] gi|148567943|gb|ABQ90088.1| Polyprenyl synthetase [Roseiflexus sp. RS-1] Length = 349 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 14/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R+ LV A L + AL AIE +H SLIHDDL +D+ RRG TVH Sbjct: 71 GGKRLRAALVLLSARLGAYDPGRALHPAIAIELLHAASLIHDDL--VDHAGQRRGHVTVH 128 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---L 165 ++D A++ G+ Y F + ++ D + + Q M+ G++ Sbjct: 129 TRWDADVALLLGD----YLFALAANELAAEPDP-----RIIAFYTSAAQTMVEGELNPVT 179 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ Q + KT L AC++G +A + + + L FG +LG+ FQ+ D Sbjct: 180 HVEPLATAVEQYYRKIGRKTAVLFEAACKAGIAVAGGDEEQIDALGRFGYDLGLAFQIVD 239 Query: 226 DLLDCEED 233 D+LD D Sbjct: 240 DVLDYTGD 247 >gi|68304932|gb|AAY89943.1| predicted octaprenyl-diphosphate synthase [uncultured bacterium BAC13K9BAC] Length = 319 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 13/182 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR ++ + LF N + GA +E IH +L+HDD+ +D IR T + Sbjct: 44 GGKRIRPIILMLFSRLFK-NEKNVIEAGAILELIHAATLLHDDV--VDQSDIRHNIKTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +A++ G+ L + AFE+I + + +L+ T N QG + M ++ Sbjct: 101 KLWGDDSAVLVGDFLYSRAFELIVDINKE-----KVYKILAETTNQISQGEVIQLM--VK 153 Query: 169 DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D+ ID T ++ I +KTG L F + A N + + FG+N GI +QL +D Sbjct: 154 DKIIDNTDKYLNIIYLKTGKL--FEASAAVASELAGGNYIDNAKSFGKNFGIAYQLRNDY 211 Query: 228 LD 229 LD Sbjct: 212 LD 213 >gi|313681996|ref|YP_004059734.1| polyprenyl synthetase [Sulfuricurvum kujiense DSM 16994] gi|313154856|gb|ADR33534.1| Polyprenyl synthetase [Sulfuricurvum kujiense DSM 16994] Length = 299 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 22/190 (11%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK++R+ L+ A + A +GA +E IH SL+HDD+ +D +RRG P+ Sbjct: 31 LSGGKRLRARLILTIAP----HEPKAPLLGAIVELIHAASLLHDDV--IDEAQLRRGVPS 84 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 V+ TAI+ G+ L + AF S T +I + S+T + G+M+D Sbjct: 85 VNATEGSKTAIMLGDILYSKAF----SELTSFDPSIARAVAESVTR------LSVGEMMD 134 Query: 167 IQ--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + + F + +++ + +KT L+ S A++A + E +G+NLG+ FQ+ Sbjct: 135 VSMAERFNTDRDLYLKMLYLKTATLIEACAYSAAVLA---GKDAEAHATYGKNLGLAFQI 191 Query: 224 ADDLLDCEED 233 DD+LD D Sbjct: 192 VDDILDITAD 201 >gi|288941872|ref|YP_003444112.1| trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180] gi|288897244|gb|ADC63080.1| Trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180] Length = 322 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R V A + + A +E IH +L+HDD+ +D +RR + T + Sbjct: 43 GGKRLRPLSVLLAARACGYTGERHIDLAAIVEFIHTSTLLHDDV--VDGSELRRNRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ L + +FE++ N+R +L+ N +G + Q+L+ + Sbjct: 101 VVWGNDASVLVGDFLYSRSFEMMVDVG-----NMRVMEVLAHATNRIAEGEVL-QLLNER 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D DE + + KT L GA++A + +E +R +G LGI FQL DD L Sbjct: 155 DPDTDEARYMEVISRKTATLFEAGTRLGAVIAESPPEIEEAIREYGLRLGIAFQLVDDAL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSVD 219 >gi|67008259|emb|CAJ00343.1| putative geranylgerannylpyrophosphate synthase [Andrographis paniculata] Length = 140 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 2/132 (1%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+PT H + E TA++AG+ LL+ AF ++ ++ + + L IG +G+ Sbjct: 1 LRRGRPTNHKVFGEDTAVLAGDALLSLAFNHVAEKTKNVEHCRVVRAIAELALAIGSEGL 60 Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 + GQ++D+ + E I ++ I KT L+ A G I+ E E LR + + Sbjct: 61 VAGQIVDLDSEGEKISLNELEYIHVHKTSMLLEAAAVCGGILGGGESTEVESLRKYARCI 120 Query: 218 GIIFQLADDLLD 229 G++FQ+ DD+LD Sbjct: 121 GLLFQVVDDILD 132 >gi|224001362|ref|XP_002290353.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973775|gb|EED92105.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 318 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 25/191 (13%) Query: 50 GKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GK+ R +V A NH + ++G +E IH SLIHDD+ +D RRG Sbjct: 37 GKRFRPTIVQLMA---KANHQGSEVWRKQAQLGQIVEMIHVASLIHDDV--LDEADTRRG 91 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 VH Y A++AG+ LL A +++ +L++ Q+M + L+ ++ G+ Sbjct: 92 GEAVHKLYSNKVAVLAGDYLLARASVLLA----RLENTAVVQIMAT-----ALESLVAGE 142 Query: 164 MLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC--FGENLG 218 ++ ++ +E + KT +L+C+AC S A++ + C FG ++G Sbjct: 143 IMQLKASPEELLQMQSYLKKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGFHMG 202 Query: 219 IIFQLADDLLD 229 + FQ+ DD+LD Sbjct: 203 LAFQIQDDILD 213 >gi|289435907|ref|YP_003465779.1| polyprenyl synthetase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172151|emb|CBH28697.1| polyprenyl synthetase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 326 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 99/185 (53%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPDFDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI ++ ++ +L G++ + Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155 Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + +D T + ++ KT L +C SGA + AS+ + G LG+ FQ+ Sbjct: 156 RTSYKMDVTVREYLTRISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQII 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|229549603|ref|ZP_04438328.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 29200] gi|255972303|ref|ZP_05422889.1| polyprenyl synthetase [Enterococcus faecalis T1] gi|256956509|ref|ZP_05560680.1| polyprenyl synthetase [Enterococcus faecalis DS5] gi|300860196|ref|ZP_07106283.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11] gi|312951206|ref|ZP_07770108.1| polyprenyl synthetase [Enterococcus faecalis TX0102] gi|229305268|gb|EEN71264.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 29200] gi|255963321|gb|EET95797.1| polyprenyl synthetase [Enterococcus faecalis T1] gi|256947005|gb|EEU63637.1| polyprenyl synthetase [Enterococcus faecalis DS5] gi|300849235|gb|EFK76985.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11] gi|310630740|gb|EFQ14023.1| polyprenyl synthetase [Enterococcus faecalis TX0102] gi|315034608|gb|EFT46540.1| polyprenyl synthetase [Enterococcus faecalis TX0027] gi|315152610|gb|EFT96626.1| polyprenyl synthetase [Enterococcus faecalis TX0031] gi|315159462|gb|EFU03479.1| polyprenyl synthetase [Enterococcus faecalis TX0312] Length = 326 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 16/209 (7%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + T++ D + + A GGK +R FL T+ L++ A++E +H +L Sbjct: 26 LHTRNEDIEEALVTLARSGGKLLRPAFFFLFTQLGDEEKQEKQQLLKIAASLEILHMATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D+ +RRG T+ QY + A+ G+ L T F +I+ D + Sbjct: 86 IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204 + + G++ +L G++ + F + + KT L +C GA H+S+ Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + G ++GI FQ+ DD+LD D Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224 >gi|281354894|ref|ZP_06241388.1| Polyprenyl synthetase [Victivallis vadensis ATCC BAA-548] gi|281317774|gb|EFB01794.1| Polyprenyl synthetase [Victivallis vadensis ATCC BAA-548] Length = 355 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 44/242 (18%) Query: 22 DLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D LL T D L A+R Y + GGK++R ++ L + AL AA+E Sbjct: 13 DRLLADDEFPATVRPDYLRDAVRDYPVRGGKRLRPAMLIWSCGLLGGSESAALYPAAAVE 72 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------------DEVT------AIIAG-- 120 H ++L+HDD+ D+ RRG PT H++ D+ AI+AG Sbjct: 73 VFHNWTLVHDDIIDQDD--TRRGAPTSHVKLAAELGGRFSLAADDAERTGRDFAILAGDL 130 Query: 121 -----NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175 N LL + E P+ + R Q + + ++ G+ LD++ + T Sbjct: 131 QQGWANDLLLRSAEHGVPPEVTVALGRRFQKLAN-------SDLISGEALDVEFSLRELT 183 Query: 176 -----QVFMIQKMKTGALMCFACESGAIM----AHASQNEKERLRCFGENLGIIFQLADD 226 +V + +KTGAL+ F E+GA++ A A + +L F GI FQL DD Sbjct: 184 GLKSQEVRTMLGLKTGALLQFCTEAGAMIALNTADAEHPDVRKLSEFALAAGIAFQLRDD 243 Query: 227 LL 228 L Sbjct: 244 YL 245 >gi|257871265|ref|ZP_05650918.1| polyprenyl synthetase [Enterococcus gallinarum EG2] gi|257805429|gb|EEV34251.1| polyprenyl synthetase [Enterococcus gallinarum EG2] Length = 326 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 16/197 (8%) Query: 43 IRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + + GGK +R FL + + + ++ A++E +H +LIHDD+ +D+ Sbjct: 38 VDFTYSGGKMLRPALFFLFADLGEPIDERNDQLTKIAASLEILHMATLIHDDI--IDDSP 95 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+ TV +Y + A+ G+ L T FE+ L +++ L+ T+ ++ + Sbjct: 96 LRRGRITVQAKYGKDIAVYTGDLLFTQFFEL-------LIESMNGSHFLA-TNAQAMKRL 147 Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 L G++ + + IDE+ +Q + KT L AC GA +ER G N Sbjct: 148 LLGELDQMHTRYNIDESIADYLQSINGKTAELFWLACIEGAHFGGLDLENQERAGEIGRN 207 Query: 217 LGIIFQLADDLLDCEED 233 +GI FQ+ DD+LD D Sbjct: 208 IGIAFQVFDDILDYTAD 224 >gi|256961512|ref|ZP_05565683.1| polyprenyl synthetase [Enterococcus faecalis Merz96] gi|293385200|ref|ZP_06631019.1| polyprenyl synthetase family protein [Enterococcus faecalis R712] gi|293388168|ref|ZP_06632690.1| polyprenyl synthetase family protein [Enterococcus faecalis S613] gi|312908285|ref|ZP_07767249.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512] gi|312910643|ref|ZP_07769484.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516] gi|256952008|gb|EEU68640.1| polyprenyl synthetase [Enterococcus faecalis Merz96] gi|291077533|gb|EFE14897.1| polyprenyl synthetase family protein [Enterococcus faecalis R712] gi|291082408|gb|EFE19371.1| polyprenyl synthetase family protein [Enterococcus faecalis S613] gi|310625699|gb|EFQ08982.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512] gi|311289019|gb|EFQ67575.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516] Length = 326 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 16/209 (7%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 +QT++ D + + A GGK +R FL + L++ A++E +H +L Sbjct: 26 LQTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D+ +RRG T+ QY + A+ G+ L T F +I+ D + Sbjct: 86 IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204 + + G++ +L G++ + F + + KT L +C GA H+S+ Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + G ++GI FQ+ DD+LD D Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224 >gi|222109984|ref|YP_002552248.1| polyprenyl synthetase [Acidovorax ebreus TPSY] gi|221729428|gb|ACM32248.1| Polyprenyl synthetase [Acidovorax ebreus TPSY] Length = 327 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 16/202 (7%) Query: 38 RLLSAI-------RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 RL SA+ RY + GGK++R L+ + + A +E IH +L+H Sbjct: 29 RLQSAVPLVGEVARYIISAGGKRLRPALLLLMSGALGYTGSQRFNLAAVVEFIHTATLLH 88 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D +RRG+PT + + +++ G+ L T AF+++ ++R +L+ Sbjct: 89 DDV--VDESTLRRGRPTANENFGNPASVLVGDFLYTRAFQMMVE-----TSSLRVMEILA 141 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 N+ +G + Q+++ D + E+ + + KT L + A++A + + Sbjct: 142 EATNVIAEGEVQ-QLMNTHDASLSESGYLNVIRSKTAKLFEASARLAAVLAASPPEIEHA 200 Query: 210 LRCFGENLGIIFQLADDLLDCE 231 +G+ LG FQ+ DD+LD + Sbjct: 201 CASYGQALGTAFQVIDDVLDYD 222 >gi|325925951|ref|ZP_08187318.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans 91-118] gi|325543616|gb|EGD15032.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans 91-118] Length = 332 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + AS +++L +G LG FQ+ADD+L Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGASAQVQQQLYDYGMQLGFAFQIADDVL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|225849175|ref|YP_002729339.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644434|gb|ACN99484.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense Az-Fu1] Length = 317 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%) Query: 49 GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R +LV + AS+ N + +A+E +H SL+HDD+ +D RRG+ T Sbjct: 35 GGKRVRPYLVLKFASMIRGYNKEEDYILASALEYLHTASLLHDDV--VDESEKRRGRLTA 92 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + T ++ G+ + A + S I + + + ++ M GQ+L++ Sbjct: 93 NRVFGNDTTVLVGDYMYANALYLFS---------IYGDIDMIKNVSDSVKKMAEGQLLEL 143 Query: 168 Q-----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + D D+ + I KT L C G +A +N KE +G NLG+ FQ Sbjct: 144 KKIANFDTTFDD--YYKIVLGKTAVLFGSCCYVGTALASEDKNLKENAYQYGVNLGVAFQ 201 Query: 223 LADDLLDCEEDLPK 236 + DD+LD E D K Sbjct: 202 IVDDILDYEGDEEK 215 >gi|307595875|ref|YP_003902192.1| polyprenyl synthetase [Vulcanisaeta distributa DSM 14429] gi|307551076|gb|ADN51141.1| Polyprenyl synthetase [Vulcanisaeta distributa DSM 14429] Length = 343 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%) Query: 26 QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 Q ++ + ++ A+ Y + GGK++R + A ++ AL A +E IH Sbjct: 18 QLIKYLSKEVSEEFRDAVIYQVSTGGKRLRPLITLTAARACGGDYRVALPAAAIVELIHN 77 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSLI+DD+ +D +RR KPTV +Y + AI+ G + E I + +D I Sbjct: 78 YSLIYDDI--IDEALLRRNKPTVRAKYGDYAAILIG----IWYREAIEEAILETRDPIAF 131 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ----------------------K 182 + T ++ + G+ LDI E+ + ++ Sbjct: 132 ARETANT----IRAIDEGERLDILLEYAGRRDPYFVENRLGPRLLSNWEALYNTYVKMIS 187 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +KT AL+ A GA+ A+A K L +G LG+ FQ+ DD+LD D+ K Sbjct: 188 LKTAALIRTAAVFGAMSANAPHCIKP-LSDYGTYLGLAFQVLDDILDIFGDVKK 240 >gi|78048606|ref|YP_364781.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037036|emb|CAJ24768.1| Octaprenyl-diphosphate synthase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 332 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + AS +++L +G LG FQ+ADD+L Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGASAQVQQQLYDYGMQLGFAFQIADDVL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|255318820|ref|ZP_05360046.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82] gi|262378919|ref|ZP_06072076.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164] gi|255304076|gb|EET83267.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82] gi|262300204|gb|EEY88116.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164] Length = 325 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 20/191 (10%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L N+ H A ++ A IE +H +L+HDD+ +D +RRG+P Sbjct: 46 GGKRMRPIMCLLAAYACGETNLKH--AQKLAAIIEMLHTATLVHDDV--VDESGLRRGRP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T + ++ TA++ G+ L+ AF+++ DN ++L + G + G++L Sbjct: 102 TANATWNNQTAVLVGDFLIARAFDLLVD-----LDN----MILLKDFSTGTCEIAEGEVL 152 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 +Q + D T+ +Q + KT L A E AI+A + +E LR F + G FQ Sbjct: 153 QLQAQHQPDTTEAVYLQIIHGKTSRLFELATEGAAILAGKPEY-REPLRRFAGHFGNAFQ 211 Query: 223 LADDLLDCEED 233 + DD+LD D Sbjct: 212 IIDDILDYTSD 222 >gi|313631736|gb|EFR98936.1| heptaprenyl diphosphate synthase component 2 [Listeria seeligeri FSL N1-067] Length = 291 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 99/185 (53%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 11 GGKLLRPAFALLSAQAGPDFDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 68 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI + NI + +L G++ + Sbjct: 69 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIEFN-----SKNI--EKILMGELDQM 120 Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + +D T + ++ KT L +C SGA + AS+ + G LG+ FQ+ Sbjct: 121 RTSYKMDVTVREYLTRISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQII 180 Query: 225 DDLLD 229 DD+LD Sbjct: 181 DDVLD 185 >gi|88859033|ref|ZP_01133674.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas tunicata D2] gi|88819259|gb|EAR29073.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas tunicata D2] Length = 323 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + A +E IH +L+HDD+ +D +RRG T + Sbjct: 43 GGKRVRPMLSILSAKALGYEGDAHITLAAIVEFIHTATLLHDDV--VDESDLRRGNATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF+++ + +R +L+ N+ +G + Q+++ Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLMVGL-----EEMRVMKILADATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + A++ +E+L+ +G +LG FQL DD+L Sbjct: 155 DPDTTEQSYMQVIYSKTAKLFEAATQLAAVITRKDAATEEQLKLYGMHLGTAFQLVDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|291612793|ref|YP_003522950.1| trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1] gi|291582905|gb|ADE10563.1| Trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1] Length = 320 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A F + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 41 GGKRLRPALVLLSAQAFGYGGKHHHDLAAVVEFIHTATLLHDDV--VDESELRRGRETAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +R L+ N+ +G + Q+L+ Sbjct: 99 ALFGNAASVLVGDFLYSRSFQMMVDVG-----EMRVMQTLADATNVIAEGEVL-QLLNCH 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +D + KT L A GAI+ AS ++E +G +LG FQL DD+L Sbjct: 153 DASVDIPNYMRVIHCKTAKLFEAAMRLGAILGKASTADEEAAAKYGMHLGTAFQLIDDVL 212 Query: 229 DCEED 233 D D Sbjct: 213 DYSAD 217 >gi|254439146|ref|ZP_05052640.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] gi|198254592|gb|EDY78906.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] Length = 286 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 21/224 (9%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 + +D +D LLL +S R+ A RY GG ++R+ L + A+ N++ + Sbjct: 16 RDVDAQIDRLLLPNSS--------RVADAARYHFSAGGARVRARLGLDAAAALNLSPQAS 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L A E +H SL+HDDL D +RRGKP+V ++ + AI G+ L++ A+ I+ Sbjct: 68 LACAIAPELLHNASLVHDDL--QDGDAMRRGKPSVWSRFGKDIAISTGDLLISAAYMAIA 125 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 + + L L H+ L + GQ D + I K+G L+ Sbjct: 126 A-------HPYPALALRAMHDAVLY-TIDGQTQDCRSTQPTPEAYVNIAANKSGPLLALP 177 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I A A +E + G L + +Q DD++D +DL K Sbjct: 178 IRLALIAAQAPG--QETVVHAGRALAVAYQTLDDIMDRADDLAK 219 >gi|330927830|ref|XP_003302019.1| hypothetical protein PTT_13690 [Pyrenophora teres f. teres 0-1] gi|311322852|gb|EFQ89885.1| hypothetical protein PTT_13690 [Pyrenophora teres f. teres 0-1] Length = 385 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 91/162 (56%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RR P+ ++++ A++AG+ LL A ++ Sbjct: 127 RLAEITELIHTASLLHDDV--IDHSVSRRSAPSANVEFGNKMAVLAGDFLLGRASVALA- 183 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187 +L+D ++L+ ++ N+ ++G +DE + ++T + +QK +K+ + Sbjct: 184 ---RLRDPEVTELLATVIANL-VEGEFMQLKNTARDEKNPAWTEDTVSYYLQKTYLKSAS 239 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + AI+ ++ + E +G+NLG+ FQL DD+LD Sbjct: 240 LISKSCRAAAILGGSTPDVVEAAYLYGKNLGLAFQLVDDMLD 281 >gi|12231186|dbj|BAB20977.1| putative GGPP synthase [Lactuca indica var. laciniata] Length = 126 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGKPT HI Y E A++AG+ LL+++FE I++ + + + + L IG Sbjct: 1 NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHIATATKGVSSDRILRAIGELAKCIGS 60 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +G++ GQ++D+ E D + I KT AL+ + GAIM S E E+LR F Sbjct: 61 EGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120 Query: 215 ENLGII 220 ++G++ Sbjct: 121 RSIGLL 126 >gi|284032149|ref|YP_003382080.1| polyprenyl synthetase [Kribbella flavida DSM 17836] gi|283811442|gb|ADB33281.1| Polyprenyl synthetase [Kribbella flavida DSM 17836] Length = 368 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 11/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H +SL+HDD+ MD RR + T + AI+AG+ LL+ AF+++ S Sbjct: 114 ELVHNFSLLHDDV--MDCDTTRRHRATAWTVFGLGPAILAGDALLSLAFDVLVSSGEPAA 171 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESG 196 D+ L +Q ++ GQ+ D E ++ ++ + ++KTGAL+ + G Sbjct: 172 DDGAKVL------GQAVQELVEGQLADAHFEIRNDVTLSECLRMAQLKTGALLGCSTALG 225 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A+ + + LR FGE+LG+ +Q DDLL Sbjct: 226 AMFGGGRSEQVDHLRLFGEDLGLAYQYVDDLL 257 >gi|325094604|gb|EGC47914.1| decaprenyl-diphosphate synthase subunit [Ajellomyces capsulatus H88] Length = 522 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 88/162 (54%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++ + A++AG+ LL A ++ Sbjct: 264 RLAEITELIHTASLLHDDV--IDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVALA- 320 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQVFMIQK--MKTGA 187 +L+D +L+ ++ N+ ++G + + ++ F ++T + +QK +K+ + Sbjct: 321 ---RLRDPEVIELLSTVIANL-IEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSAS 376 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + A++ H+S E +G NLG+ FQL DD+LD Sbjct: 377 LISKSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLD 418 >gi|167044663|gb|ABZ09334.1| putative Polyprenyl synthetase [uncultured marine microorganism HF4000_APKG7H23] Length = 328 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 29/196 (14%) Query: 45 YALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 YA++ GGKK+R L A + + + A+E +H SL+HDD ++D+ IRRG Sbjct: 45 YAVMSGGKKLRPALTLLSAQFHPHDPTAPIIMATAVELLHIASLVHDD--TVDSSTIRRG 102 Query: 104 KPTVHIQYDEVTAIIAGNGLL----TYA-----FEIISSPKTQLKDNIRSQLMLSLT-HN 153 + TV ++ A++ G+ L TY +I + + R +L + HN Sbjct: 103 RATVSSRWGGKVAVMLGDYLFATSATYVCDTGDIRVIRRFSEAIMELARGELSEHFSLHN 162 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + D ++ D KT +L C A E GA+++ AS++ + L+ + Sbjct: 163 ------WDQTVADYEERTYD----------KTASLFCTASECGAVLSGASESHCQALKAY 206 Query: 214 GENLGIIFQLADDLLD 229 G +LG+ FQ+ DD+LD Sbjct: 207 GYHLGMAFQIMDDILD 222 >gi|261749413|ref|YP_003257099.1| polyprenyl synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497506|gb|ACX83956.1| polyprenyl synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 325 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 8/183 (4%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IR V A + + IE IH +L+HDD+ +DN Y+RRG +++ Sbjct: 46 GKQIRPMFVFLIAKMLGTIQKKTYHTASLIELIHTATLVHDDV--IDNSYLRRGSFSINA 103 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ LL+ + + + I + + ++ LQ M + LDI + Sbjct: 104 IWKNKIAVLVGDYLLSKSLLLATENNYHDLLKIICRTIKDMSEGELLQ-MEKSKKLDITE 162 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + ++ I KT +L+ +CE GA +A+++ ++R FG GI FQ+ DDL D Sbjct: 163 KIYNQ-----IIYHKTASLIAASCEGGARSVNANEDIALKMRKFGGLTGIAFQIKDDLFD 217 Query: 230 CEE 232 E Sbjct: 218 YNE 220 >gi|114566224|ref|YP_753378.1| trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337159|gb|ABI68007.1| Trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 322 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 23/224 (10%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 QE SK++D+ ++ LL ++A H L+ A GGK++R A + + Sbjct: 19 QELSKKLDSRIE-LLNESAVH--------LIKA------GGKRLRPAFALLSAHFYMDDL 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + + +E IH SL+HDD+ +DN RRG TV + +I AG+ + A Sbjct: 64 TEVIPLAVGLELIHMASLVHDDV--IDNSQTRRGTETVKSAWGNRVSIYAGDFIFARALS 121 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 +I++ + ++ ++ + + +Q M+ + + + KT L+ Sbjct: 122 LIATYERSNVVDVLAEASMKICEGEIIQ------MMSCYNVKLGLKNYLRRIERKTALLI 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +C+ GA++A+A + E LR +G LG+ FQ+ DD+LD D Sbjct: 176 SVSCQLGAMIANAPEQEVRALRNYGYYLGMAFQVTDDILDIIAD 219 >gi|225555298|gb|EEH03590.1| decaprenyl-diphosphate synthase subunit 1 [Ajellomyces capsulatus G186AR] Length = 521 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 88/162 (54%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++ + A++AG+ LL A ++ Sbjct: 263 RLAEITELIHTASLLHDDV--IDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVALA- 319 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQVFMIQK--MKTGA 187 +L+D +L+ ++ N+ ++G + + ++ F ++T + +QK +K+ + Sbjct: 320 ---RLRDPEVIELLSTVIANL-IEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSAS 375 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + A++ H+S E +G NLG+ FQL DD+LD Sbjct: 376 LISKSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLD 417 >gi|219125696|ref|XP_002183110.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405385|gb|EEC45328.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 309 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 24/185 (12%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+ R +V A TA ++G +E IH SLIHDD+ +D RRG VH Sbjct: 39 GKRFRPTIVQLMAK-------TA-QLGQIVEMIHVASLIHDDV--LDEADTRRGGEAVHK 88 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 Y A++AG+ LL A +++ +L++ Q+M + L+ ++ G+++ ++ Sbjct: 89 LYSNKVAVLAGDYLLARASVLLA----RLENTAVVQVMAT-----ALESLVAGEIMQLKS 139 Query: 170 --EFIDETQVFMIQK-MKTGALMCFACESGAIMAHASQNEKERLRC--FGENLGIIFQLA 224 E + E + ++ + KT +L+C+AC S A++ + C FG +LG+ +Q+ Sbjct: 140 PAESLLEMESYLRKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGFHLGLAYQIQ 199 Query: 225 DDLLD 229 DD+LD Sbjct: 200 DDILD 204 >gi|297844640|ref|XP_002890201.1| hypothetical protein ARALYDRAFT_889097 [Arabidopsis lyrata subsp. lyrata] gi|297336043|gb|EFH66460.1| hypothetical protein ARALYDRAFT_889097 [Arabidopsis lyrata subsp. lyrata] Length = 865 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L + LT R+G IE IH SLIHDD+ +D +RR Sbjct: 583 GGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRR 640 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TVH + A++AG+ + A ++ N+ + ++ L + ++ G Sbjct: 641 GKETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLQVIKLISQV-IKDFASG 691 Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F ++ + KT +L+ + + AI + E++ FG+NLG+ Sbjct: 692 EIKQASSLFDCDVELDDYLLKSYYKTASLVAASTKGAAIFSKVESEVAEQMYQFGKNLGL 751 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 752 SFQVVDDILD 761 >gi|50085967|ref|YP_047477.1| octaprenyl-diphosphate synthase [Acinetobacter sp. ADP1] gi|49531943|emb|CAG69655.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Acinetobacter sp. ADP1] Length = 325 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A L R + A IE +H +L+HDD+ +D +RRG+PT Sbjct: 46 GGKRMRPIMCLLAAKACGSTDLEQHRKLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ TA++ G+ L++ AF+++ L D ++L + G + G++L + Sbjct: 104 NATWNNQTAVLVGDFLISRAFDLL----VDLND-----MVLLKDFSTGTCEIAEGEVLQL 154 Query: 168 QDEFIDET--QVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q + ET Q ++ I KT L A E AI++ + +E LR F + G FQ+ Sbjct: 155 QSQHDPETTEQTYLNIIHGKTSRLFELATEGAAILS-GTPEYREPLRHFAGHFGNAFQII 213 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 214 DDILDYTSD 222 >gi|21243633|ref|NP_643215.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri str. 306] gi|21109209|gb|AAM37751.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri str. 306] Length = 332 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + AS +++L +G LG FQ+ADD+L Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGASAQVQQQLYDYGMQLGFAFQIADDVL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|254468498|ref|ZP_05081904.1| octaprenyl-diphosphate synthase [beta proteobacterium KB13] gi|207087308|gb|EDZ64591.1| octaprenyl-diphosphate synthase [beta proteobacterium KB13] Length = 327 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 8/188 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKK+R + A L ++ A +E IH +L+HDD+ +D+ RR PT + Sbjct: 48 GGKKMRPQCLINLAGLAGGVKDIHYQLAAIVEFIHTATLLHDDV--VDDSDTRRSSPTAN 105 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 IQ+ +I+ G+ + + +F+++ DNI +L+ T N +G + Q+++ Sbjct: 106 IQFGNSASILVGDFIYSRSFQMMVEL-----DNIEIMDILAYTTNKIAEGEVL-QLINKN 159 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I + F + K KTG L + I + N+K L G+ G I+QL DD+L Sbjct: 160 NFDISQDNYFKVIKAKTGVLFEACGKLACIANKCTLNQKTSLSLIGKIFGEIYQLIDDVL 219 Query: 229 DCEEDLPK 236 D D+ K Sbjct: 220 DYSGDVAK 227 >gi|323495811|ref|ZP_08100879.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326] gi|323319027|gb|EGA71970.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326] Length = 323 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 10/206 (4%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 H Q + L++ + + ++ GGK+IR L A A IE IH +L Sbjct: 22 HAQLNSDVSLINQLGFYIISGGGKRIRPMLAVLSARALGYQGNAHTTAAAFIEFIHTATL 81 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ + Sbjct: 82 LHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKL 134 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +S N+ +G + Q+++ D E + KT L A + GAI+ A ++ + Sbjct: 135 MSDAVNVIAEGEVQ-QLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPEDVE 193 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L+ +G+ LG FQL DD++D D Sbjct: 194 RALQNYGKYLGTAFQLIDDVMDYTSD 219 >gi|296392961|ref|YP_003657845.1| polyprenyl synthetase [Segniliparus rotundus DSM 44985] gi|296180108|gb|ADG97014.1| Polyprenyl synthetase [Segniliparus rotundus DSM 44985] Length = 340 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 21/185 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GK RS L E AS+ + H+T A+ AIE IH + LIHDD+ MD RRG+ Sbjct: 53 GKIARSRLCAELASMVDGPHVTIPRERAITAATAIEMIHNFGLIHDDI--MDQDEERRGR 110 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 V + Y AI+ G+ LL A +I +S T++ D N + ++ GQ Sbjct: 111 KAVWVAYGTGMAILLGDILLATAVKIAASVGNTRIAD----------IFNQAIGKLIEGQ 160 Query: 164 MLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 +LD+ I T +++ I + KT +L A S A +A +Q + E + F + G+ F Sbjct: 161 LLDMGSN-IGTTLEELWGIAEKKTASLFELAAMSIAELACVTQRQGEAMESFSRHYGVAF 219 Query: 222 QLADD 226 Q +D Sbjct: 220 QYMND 224 >gi|159184398|ref|NP_353656.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str. C58] gi|159139711|gb|AAK86441.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str. C58] Length = 338 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L AS+F +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMLTLASASMFGYEGDNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ QV + KT AL A E G I+A + + L+ +G NLG+ FQL DD+L Sbjct: 175 DDYL---QVI---RAKTAALFAAAAEVGPIVAKTDKASRSALKSYGMNLGLAFQLVDDVL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|237809123|ref|YP_002893563.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187] gi|237501384|gb|ACQ93977.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187] Length = 323 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 10/202 (4%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + + Q + L++ + Y ++ GGK+IR L A + + IE IH +L Sbjct: 22 YQRLQSDVALVNQLAYYIISGGGKRIRPLLAVLSARAIGYQGDAHISLATIIEFIHTATL 81 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D +RRG+ T + + +++ G+ L T AF+++ N+R + Sbjct: 82 LHDDV--VDESVLRRGRDTANQLFGNAASVLVGDFLHTRAFQMMVELG-----NMRIMQL 134 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 LS N+ +G + Q+++ D E + KT L A AI+A+ + + Sbjct: 135 LSEATNLIAEGEVM-QLMNCNDPSTTEDNYLQVIYCKTAKLFEAATHCAAILANQPAHIE 193 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 + LR +G+ LG FQL DD++D Sbjct: 194 QALRDYGKYLGTAFQLIDDVMD 215 >gi|112950409|gb|ABI26723.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens] Length = 358 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L AS+F +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 77 GGKRLRPMLTLASASMFGYEGDNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 134 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 135 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 194 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A + + L+ +G NLG+ FQL DD+L Sbjct: 195 DDYL------QVIRAKTAALFAAAAEVGPIVAKTDKATRSALKSYGMNLGLAFQLVDDVL 248 Query: 229 D 229 D Sbjct: 249 D 249 >gi|108757727|ref|YP_631865.1| polyprenyl synthase family protein [Myxococcus xanthus DK 1622] gi|108461607|gb|ABF86792.1| polyprenyl synthase family protein [Myxococcus xanthus DK 1622] Length = 332 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 18/199 (9%) Query: 36 NDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 D L+ A R+ LG K+ R L V + V A E IH SL+HDD+ Sbjct: 33 GDTLMEAARHLCLGSGSKRARPMLARLFGGAVGVPAERLVDVAVAAELIHSASLLHDDV- 91 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD---NIRSQLMLSL 150 +D G RRG+PTV+ ++ + A+++G+ +L+ +S +L ++ S++ + Sbjct: 92 -VDAGMFRRGRPTVNARWGNIVAVMSGDLILSTGLFQLSQLDARLTRSALSVVSEMTRAA 150 Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 + +G D + ++ I + KTG+L + + A +A + ER Sbjct: 151 IAEVEARG----------DLDLPLNRLRFIAEGKTGSLFGWCGNAAATLAEHPE-AVERF 199 Query: 211 RCFGENLGIIFQLADDLLD 229 FG +LG+ FQ+ADD+ D Sbjct: 200 DGFGRHLGVAFQIADDIRD 218 >gi|300702983|ref|YP_003744585.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957] gi|299070646|emb|CBJ41941.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957] Length = 322 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 95/183 (51%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R ++ A+ + NH L A +E IH +L+HDD+ +D +RRG+ T Sbjct: 43 GGKRLRPVILLLMANALGYRGNHHHEL--AAVVEFIHTATLLHDDV--VDESELRRGRQT 98 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + + +++ G+ L + AF+++ D++R +L+ N+ +G + Q+L+ Sbjct: 99 ANAVFGNAASVLVGDFLYSRAFQMMVQ-----ADSMRVMQILADATNVISEGEVL-QLLN 152 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + D + E + + + KT L A + GA+++ A + +G +G FQ+ DD Sbjct: 153 MHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDD 212 Query: 227 LLD 229 LLD Sbjct: 213 LLD 215 >gi|189192558|ref|XP_001932618.1| decaprenyl-diphosphate synthase subunit 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187974224|gb|EDU41723.1| decaprenyl-diphosphate synthase subunit 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 385 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 92/166 (55%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RR P+ ++++ A++AG+ LL A ++ Sbjct: 127 RLAEITELIHTASLLHDDV--IDHSVSRRSAPSANVEFGNKMAVLAGDFLLGRASVALA- 183 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183 +L+D ++L+ ++ N ++ G+ + +++ + ++T + +QK + Sbjct: 184 ---RLRDPEVTELLATVIAN-----LVEGEFMQLKNTARDDKNPAWTEDTVSYYLQKTYL 235 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K+ +L+ +C + AI+ ++ + E +G+NLG+ FQL DD+LD Sbjct: 236 KSASLISKSCRAAAILGGSTPDVVEAAYLYGKNLGLAFQLVDDMLD 281 >gi|37903500|gb|AAP56240.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens] Length = 358 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L AS+F +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 77 GGKRLRPMLTLASASMFGYEGDNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 134 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 135 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 194 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A + + L+ +G NLG+ FQL DD+L Sbjct: 195 DDYL------QVIRAKTAALFAAAAEVGPIVAKTDKATRSALKSYGMNLGLAFQLVDDVL 248 Query: 229 D 229 D Sbjct: 249 D 249 >gi|115523345|ref|YP_780256.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53] gi|115517292|gb|ABJ05276.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53] Length = 288 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 17/159 (10%) Query: 38 RLLSAIRYALLG-GKKIRSFLV-TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 RL A+RY++ G ++R L + A+ N GAA+E +HC SL+HDDLP Sbjct: 26 RLAEAMRYSVFPRGARVRPRLCHSVAAACGEDNPAATEAAGAALELMHCASLVHDDLPCF 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLT 151 D RRG+P+VH + E A++ G+ L+ AF+ I+ P LK L +++ Sbjct: 86 DGADTRRGRPSVHKTFGEPLAVLTGDALIVLAFQTIARVDCDPARLLK------LTMTVG 139 Query: 152 HNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 +G+ G++ GQ + + E + + KTGAL Sbjct: 140 EAVGVPFGIVAGQAWECESEI----NLAHYHRSKTGALF 174 >gi|292656843|ref|YP_003536740.1| geranylgeranyl diphosphate synthase [Haloferax volcanii DS2] gi|291372747|gb|ADE04974.1| geranylgeranyl diphosphate synthase [Haloferax volcanii DS2] Length = 348 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 100/217 (46%), Gaps = 34/217 (15%) Query: 37 DRLLSAIRYAL-LGGKKIR---SFLVTECASLFNVNHLT---------------ALRVGA 77 +RL A RY L GGK++R S L E SL +V ++ + Sbjct: 35 ERLYEASRYLLKAGGKRLRPTVSLLTAE--SLADVEPMSEDYRAFPTLAGDPIDVMVAAV 92 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 +IE I ++LIH MD+ +RRG P VH +YD TAI+AG+ L AFE+++ Sbjct: 93 SIEVIQSFTLIH--DDIMDDDDLRRGVPAVHKEYDNSTAILAGDTLYAKAFELLTKTGAD 150 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFA 192 D + + L+ T + GQ LDI EF T+V + ++KT L A Sbjct: 151 PADGLEAVRRLATTCT----QICEGQALDI--EFERRTEVLPDEYLQMVELKTAVLYGTA 204 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ A E L +G G FQ+ DD+LD Sbjct: 205 AAVPAVVMGADDEVVEALYQYGIASGSAFQIQDDVLD 241 >gi|297801684|ref|XP_002868726.1| hypothetical protein ARALYDRAFT_494049 [Arabidopsis lyrata subsp. lyrata] gi|297314562|gb|EFH44985.1| hypothetical protein ARALYDRAFT_494049 [Arabidopsis lyrata subsp. lyrata] Length = 417 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 35/241 (14%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI------------RYALLGGKKIRS-- 55 QE+ K I L++L A +Q + ND LLS + + GGK++R Sbjct: 87 QESRKPIS--LENLFEVVADDLQ-RLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGL 143 Query: 56 -FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111 FLV+ A L + LT R+G IE IH SLIHDD+ +D +RRGK TVH + Sbjct: 144 VFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRRGKETVHELF 201 Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171 A++AG+ + A ++ N+ + ++ L + ++ G++ F Sbjct: 202 GTRVAVLAGDFMFAQASWYLA--------NLENLQVIKLISQV-IKDFASGEIKQASSLF 252 Query: 172 ---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 ++ + KT +L+ + + AI + E++ FG+NLG+ FQ+ DD+L Sbjct: 253 DCDVELDDYLLKSYYKTASLVAASTKGAAIFSKVESEVAEQMYQFGKNLGLSFQVVDDIL 312 Query: 229 D 229 D Sbjct: 313 D 313 >gi|271962169|ref|YP_003336365.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM 43021] gi|270505344|gb|ACZ83622.1| Trans-hexaprenyltranstransferase [Streptosporangium roseum DSM 43021] Length = 331 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 17/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R+ LV A+ F + GA IE H +L HDD+ MD +RRG P+ Sbjct: 53 GGKRFRAMLVL-LAAQFGSPEAPGVVPGAVVIELTHLATLYHDDV--MDEAPVRRGSPSA 109 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++D AI+ G+ L A EI++ D IR Q ++ GQ+ + Sbjct: 110 NARWDNTVAILTGDYLFAQASEILADLGA---DVIRIQAQT-------FSRLVRGQIRET 159 Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E V + KTG+L+ + GA+++ AS +RL E +G+ +QL Sbjct: 160 IGPRPGEDHVAHYIDVLADKTGSLIATSGRFGALLSGASPEIVDRLTRACEAIGVGWQLG 219 Query: 225 DDLLDCEED 233 DDLLD D Sbjct: 220 DDLLDVASD 228 >gi|300690362|ref|YP_003751357.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07] gi|299077422|emb|CBJ50048.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07] Length = 322 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPVILLLMANALGYRGKHHHELAAVVEFIHTATLLHDDV--VDESELRRGRRTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ D++R +L+ N+ +G + Q+L++ Sbjct: 101 AVFGNAASVLVGDFLYSRAFQMMVQ-----ADSMRVMQILADATNVISEGEVL-QLLNMH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + + KT L A + GA+++ A + +G +G FQ+ DDLL Sbjct: 155 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|167630030|ref|YP_001680529.1| heptaprenyl diphosphate synthase component ii, putative [Heliobacterium modesticaldum Ice1] gi|167592770|gb|ABZ84518.1| heptaprenyl diphosphate synthase component ii, putative [Heliobacterium modesticaldum Ice1] Length = 320 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 14/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R V N L + A+E IH +L+HDD+ +D RRG PTV Sbjct: 42 GGKRLRPAFVLLAGKFHNYALERLLPLAVALELIHMATLVHDDV--VDESKTRRGIPTVR 99 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI---GLQGMLGGQML 165 ++ ++ G+ L + +IS +L D + ++ ++ + +Q M Sbjct: 100 ARWGNRISLHTGDHLFARSLLLIS----ELNDPAMTAVLAKISVEMCEGEIQQMEA--TY 153 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D+ F D ++ I++ KT L+ +C+ GA+ A + L+ +G +LG+ FQ+ D Sbjct: 154 DVHQTFRD--YLYRIKR-KTALLIAASCQLGAMAVKADPSAVRALKMYGHHLGMAFQITD 210 Query: 226 DLLDCEED 233 D+LD D Sbjct: 211 DILDMTAD 218 >gi|254389005|ref|ZP_05004236.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|197702723|gb|EDY48535.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 389 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 82/187 (43%), Gaps = 19/187 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV A + A+ A+E H +SL+HDD+ +D RR +PT Sbjct: 105 GKAIRPALVLAAARALGGDPERAVPAAVAVELAHNFSLLHDDV--IDRDPTRRHRPTAWT 162 Query: 110 QYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + AIIAG+ L++ A I++ P + S M+ L GQ D Sbjct: 163 VFGTADAIIAGDALVSLALRILAEDGHPASAAAAGRLSACMIELC---------AGQQAD 213 Query: 167 IQDEFIDETQVFMIQ-----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 E +V + + KTGAL+ +C GA+ A A L FG G+ F Sbjct: 214 CAFEGRGPQEVTLAECVEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAF 273 Query: 222 QLADDLL 228 QL DDL+ Sbjct: 274 QLIDDLI 280 >gi|169600423|ref|XP_001793634.1| hypothetical protein SNOG_03045 [Phaeosphaeria nodorum SN15] gi|160705435|gb|EAT89776.2| hypothetical protein SNOG_03045 [Phaeosphaeria nodorum SN15] Length = 292 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 89/162 (54%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RR P+ +I++ A++AG+ LL A S Sbjct: 34 RLAEITELIHTASLLHDDV--IDHSISRRSAPSANIEFGNKMAVLAGDFLLGRA----SV 87 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187 +L+D ++L+ ++ N+ ++G +DE + ++T + +QK +K+ + Sbjct: 88 ALARLRDPEVTELLATVIANL-VEGEFMQLKNTARDEKNPAWTEDTVSYYLQKTYLKSAS 146 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + AI+ ++ E +G+NLG+ FQL DD+LD Sbjct: 147 LISKSCRAAAILGGSTPEVVEAAYLYGKNLGLAFQLVDDMLD 188 >gi|28377915|ref|NP_784807.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum WCFS1] gi|254556099|ref|YP_003062516.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum JDM1] gi|308180094|ref|YP_003924222.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270749|emb|CAD63654.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum WCFS1] gi|254045026|gb|ACT61819.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum JDM1] gi|308045585|gb|ADN98128.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum subsp. plantarum ST-III] Length = 325 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 27/207 (13%) Query: 36 NDR---LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAA-IECIHCYSLIHD 90 NDR LL+A GGK +R S F +H TA LR GAA +E +H +LIHD Sbjct: 35 NDRVHDLLAA------GGKFLRPGFFY-LFSQFGPDHNTARLRAGAAAMELLHVATLIHD 87 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLS 149 D+ +D RR T+H Y + AI AG+ L T F +++ + KT D+++ Sbjct: 88 DV--IDESPERRHVTTIHQDYGQRNAIYAGDLLFTCYFDQVLIAAKT--ADDVK------ 137 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNE 206 + ++ +L G++ + F T V I + KT L +CE GA A A + Sbjct: 138 -INTAAMRAILQGELDQMAHNFDPTTTVDDYLAIARGKTARLFSLSCEQGAHFAGADASV 196 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 + + GE +G+ +Q+ DD+LD D Sbjct: 197 VKLAQQIGERMGLAYQMLDDVLDYAGD 223 >gi|302523893|ref|ZP_07276235.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. AA4] gi|302432788|gb|EFL04604.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. AA4] Length = 347 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 26/219 (11%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75 ++T+L D++ S + H+ +A+ GGK+ R A L Sbjct: 43 VETMLRDVV---KSDVPAVHD----AALHLVEAGGKRFRPLFTLLSAQFGPKQGEQVLVA 95 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E +H +L HDD+ MD +RRG +V+ ++D AI+ G+ L +A +++ Sbjct: 96 AAAVELVHLATLYHDDV--MDEATMRRGAESVNSRWDNTVAILTGDYLFAHASRLVA--- 150 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMC 190 ++ + + G ++ GQM + D+ ++ + QK TG+L+ Sbjct: 151 -----DLGTDAARIIAETFG--ELVSGQMRETVGPGPGDDPVEHYLTVIAQK--TGSLIA 201 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + G +M+ A++ + LR FG+ +G FQ++DD++D Sbjct: 202 TSGRFGGMMSGAAEEHIQALRRFGDIIGAAFQISDDVID 240 >gi|262164113|ref|ZP_06031852.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] gi|262027641|gb|EEY46307.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] Length = 323 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84 H Q + L++ + + ++ GGK++R L A NH TA A IE IH Sbjct: 22 HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSNHTTA---AAFIEFIHT 78 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ Sbjct: 79 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TEL-GSMKI 131 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++S N+ +G + Q+++ D E + KT L A + GAI+ AS Sbjct: 132 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 190 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G+ LG FQL DD++D D Sbjct: 191 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 219 >gi|255671648|gb|ACU26409.1| geranylgeranyl pyrophosphate synthase CrtE [uncultured bacterium HF186_25m_30B18] gi|255671718|gb|ACU26476.1| geranylgeranyl pyrophosphate synthase [uncultured bacterium HF186_25m_13D19] Length = 356 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 25/212 (11%) Query: 31 MQTQH---NDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86 +QT H N+ L S +++ GGK++R+ +V E A +T + + AA E +H + Sbjct: 45 LQTAHAHLNEPLRSMVVQHLQTGGKQVRARIVLEAARALGEEPMTLVPIAAACELLHNAT 104 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL---TYAFEIISSPKTQLKDNIR 143 L+HDDL D +RRG+P V +++ E AI G+ +L T A E + L ++R Sbjct: 105 LVHDDL--QDGDTVRRGEPAVWVRHGEAQAINVGDAMLMLPTLALE-----QMLLMPSVR 157 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 + + T GQ L+++ ++ K+G E+ A+ Sbjct: 158 WYIATAFTRRATETAC--GQALELELLGRGWLGRGPYLRAALGKSGPFFSLPIETAAL-- 213 Query: 201 HASQNEKERLRCFGE---NLGIIFQLADDLLD 229 A+ + R R G+ LG +FQ+ DD+LD Sbjct: 214 -AAGRQPTRARAIGDALLALGALFQIRDDVLD 244 >gi|149187005|ref|ZP_01865313.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21] gi|148829394|gb|EDL47837.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21] Length = 338 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + ++ AA+E IH +L+HDD+ +D +RRGK + Sbjct: 57 GGKRLRPMLTLAGAELVGYSGTRHHKLAAAVEFIHTATLLHDDV--VDGSDLRRGKAAAN 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + ++ G+ L + +FE+++ +++ +LS I +G + L Q Sbjct: 115 IIFGNPATVLVGDFLFSRSFELMTE-----DGSLKVLKILSGASAIIAEGEV--DQLTAQ 167 Query: 169 DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + Q ++ I + KT AL A A++A S+ E++ L +G NLG+ FQL DD Sbjct: 168 RKIDTSEQRYLHIIRAKTAALFAAASRIAAVVAECSEEEEQSLDEYGRNLGVAFQLVDDA 227 Query: 228 LDCEED 233 LD + D Sbjct: 228 LDYDSD 233 >gi|319761641|ref|YP_004125578.1| polyprenyl synthetase [Alicycliphilus denitrificans BC] gi|317116202|gb|ADU98690.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC] Length = 349 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + A +E IH +L+HDD+ +D +RRG+PT + Sbjct: 70 GGKRLRPALLLLTCGALEYKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTAN 127 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ ++R +L+ N+ +G + Q+++ Sbjct: 128 EAFGNPASVLVGDFLHTRSFQMMVE-----AGSMRILQVLADATNVIAEGEVQ-QLMNTH 181 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + KT L + AI+A ++ + ++ +G+ LG FQ+ DD+L Sbjct: 182 DASLDEAGYLHVIRSKTAKLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVL 241 Query: 229 DCEED 233 D + D Sbjct: 242 DYDGD 246 >gi|296272185|ref|YP_003654816.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299] gi|296096360|gb|ADG92310.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299] Length = 298 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 28/193 (14%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GK +RS L+ + A + + ++++ A +E IH SL+HDD+ +D RRG P+ Sbjct: 30 LATGKMLRSKLILKIAGI----NEESIKLCAIVEMIHAASLLHDDV--IDEATTRRGSPS 83 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNIGLQGMLGGQML 165 V+ YD TAI+ G+ L + AF +S ++ NI S + LS+ G+M+ Sbjct: 84 VNALYDAKTAIMFGDVLYSKAFTELSQMNKKVAYNISSAVTKLSI-----------GEMM 132 Query: 166 DIQDEFIDETQVF-----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 DI D TQ F + M S A A + ++E+ +G+NLG+ Sbjct: 133 DI-----DLTQTFNTDYNLYLDMIYKKTASLIEASAASAAILANKDEEKYALYGKNLGLA 187 Query: 221 FQLADDLLDCEED 233 FQ+ DD+LD +D Sbjct: 188 FQMIDDILDITQD 200 >gi|330901423|gb|EGH32842.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 262 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 8/159 (5%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L + +FE++ Sbjct: 9 LAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFLYSRSFEMM--- 63 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 +L +++ T I +L Q+ I+D E + + KT L + Sbjct: 64 -VELGSMEVMKILSKATRIIAEGEVL--QLSKIRDASTTEETYMEVIRGKTAMLFEASTH 120 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 S A + +A Q + E LR FG++LG+ FQL DDLLD D Sbjct: 121 SAAALCNAPQEQSEALRTFGDHLGVAFQLVDDLLDYRGD 159 >gi|294814941|ref|ZP_06773584.1| Putative polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294327540|gb|EFG09183.1| Putative polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 405 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 82/187 (43%), Gaps = 19/187 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV A + A+ A+E H +SL+HDD+ +D RR +PT Sbjct: 121 GKAIRPALVLAAARALGGDPERAVPAAVAVELAHNFSLLHDDV--IDRDPTRRHRPTAWT 178 Query: 110 QYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + AIIAG+ L++ A I++ P + S M+ L GQ D Sbjct: 179 VFGTADAIIAGDALVSLALRILAEDGHPASAAAAGRLSACMIEL---------CAGQQAD 229 Query: 167 IQDEFIDETQVFMIQ-----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 E +V + + KTGAL+ +C GA+ A A L FG G+ F Sbjct: 230 CAFEGRGPQEVTLAECVEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAF 289 Query: 222 QLADDLL 228 QL DDL+ Sbjct: 290 QLIDDLI 296 >gi|288965865|pdb|3LMD|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Corynebacterium Glutamicum Atcc 13032 gi|317455534|pdb|3Q2Q|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Corynebacterium Glutamicum Complexed With Calcium And Isoprenyl Diphosphate Length = 360 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 17/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R AS F L+ ++ +E H +L HDD+ MD +RRG P+ Sbjct: 73 GGKRFRPMFAL-LASEFGEKPLSENVIKAAVVVEITHLATLYHDDV--MDEASMRRGVPS 129 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++D AI+AG+ LL +A ++S QL + + + ++ GQM + Sbjct: 130 ANARWDNSVAILAGDILLAHASGLMS----QLGTDTVAHFAETFGE------LVTGQMRE 179 Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D + + + + KTG L+ A GA+ A A+ + L+ FG +G+IFQ+ Sbjct: 180 TVGPRDTDPIEHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIV 239 Query: 225 DDLLDC 230 DD++D Sbjct: 240 DDIIDI 245 >gi|19551716|ref|NP_599718.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] gi|62389371|ref|YP_224773.1| octaprenyl-diphosphate synthase protein [Corynebacterium glutamicum ATCC 13032] gi|21323238|dbj|BAB97866.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] gi|41324705|emb|CAF19187.1| PUTATIVE OCTAPRENYL-DIPHOSPHATE SYNTHASE PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 350 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 17/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R AS F L+ ++ +E H +L HDD+ MD +RRG P+ Sbjct: 71 GGKRFRPMFAL-LASEFGEKPLSENVIKAAVVVEITHLATLYHDDV--MDEASMRRGVPS 127 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++D AI+AG+ LL +A ++S QL + + + ++ GQM + Sbjct: 128 ANARWDNSVAILAGDILLAHASGLMS----QLGTDTVAHFAETFGE------LVTGQMRE 177 Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D + + + + KTG L+ A GA+ A A+ + L+ FG +G+IFQ+ Sbjct: 178 TVGPRDTDPIEHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIV 237 Query: 225 DDLLDC 230 DD++D Sbjct: 238 DDIIDI 243 >gi|254168668|ref|ZP_04875510.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469] gi|289596800|ref|YP_003483496.1| Polyprenyl synthetase [Aciduliprofundum boonei T469] gi|197622294|gb|EDY34867.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469] gi|289534587|gb|ADD08934.1| Polyprenyl synthetase [Aciduliprofundum boonei T469] Length = 350 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 29/204 (14%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y L GGK+IR+ L+ + + ++ +++E I Y LIHDD+ MD +RRGK Sbjct: 44 YTLRGGKRIRAILMIVGYKMMGGKNDEIIKASSSLELIQSYLLIHDDI--MDESDLRRGK 101 Query: 105 PTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 TVH I++ E AIIAG+ YA EI+SS + ++ + + Sbjct: 102 DTVHKIYEKKHLKNGFGGRPIRFGESMAIIAGDLANAYAMEILSS--SDFPAELKVKAIH 159 Query: 149 SLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACES-GAIMAHASQ 204 L I G GQ++DI E E + ++ K KT + G I+A Sbjct: 160 KLNEIIEYTGY--GQIIDIYSGALEEFKEEDLLLLHKYKTARYTIEGPLALGIILA---G 214 Query: 205 NEKERLRCFGENLGIIFQLADDLL 228 E E + + +GI FQL DD+L Sbjct: 215 KEPEGIENYAIPVGIAFQLQDDIL 238 >gi|145294625|ref|YP_001137446.1| hypothetical protein cgR_0576 [Corynebacterium glutamicum R] gi|140844545|dbj|BAF53544.1| hypothetical protein [Corynebacterium glutamicum R] Length = 350 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 17/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R AS F L+ ++ +E H +L HDD+ MD +RRG P+ Sbjct: 71 GGKRFRPMFAL-LASEFGEKPLSENVIKAAVVVEITHLATLYHDDV--MDEASMRRGVPS 127 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++D AI+AG+ LL +A ++S QL + + + ++ GQM + Sbjct: 128 ANARWDNSVAILAGDILLAHASGLMS----QLGTDTVAHFAETFGE------LVTGQMRE 177 Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D + + + + KTG L+ A GA+ A A+ + L+ FG +G+IFQ+ Sbjct: 178 TVGPRDTDPIEHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIV 237 Query: 225 DDLLDC 230 DD++D Sbjct: 238 DDIIDI 243 >gi|326443312|ref|ZP_08218046.1| putative polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 343 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 83/187 (44%), Gaps = 19/187 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV A + A+ A+E H +SL+HDD+ +D RR +PT Sbjct: 59 GKAIRPALVLAAARALGGDPERAVPAAVAVELAHNFSLLHDDV--IDRDPTRRHRPTAWT 116 Query: 110 QYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + AIIAG+ L++ A I++ P + S M+ L GQ D Sbjct: 117 VFGTADAIIAGDALVSLALRILAEDGHPASAAAAGRLSACMIELC---------AGQQAD 167 Query: 167 IQDEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 E +V + + + KTGAL+ +C GA+ A A L FG G+ F Sbjct: 168 CAFEGRGPQEVTLAECVEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAF 227 Query: 222 QLADDLL 228 QL DDL+ Sbjct: 228 QLIDDLI 234 >gi|154286806|ref|XP_001544198.1| hypothetical protein HCAG_01245 [Ajellomyces capsulatus NAm1] gi|150407839|gb|EDN03380.1| hypothetical protein HCAG_01245 [Ajellomyces capsulatus NAm1] Length = 269 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 13/162 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++ + A++AG+ LL A S Sbjct: 83 RLAEITELIHTASLLHDDV--IDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRA----SV 136 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQVFMIQK--MKTGA 187 +L+D +L+ ++ N+ ++G + + ++ F ++T + +QK +K+ + Sbjct: 137 ALARLRDPEVIELLSTVIANL-IEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSAS 195 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C + A++ H+S E +G NLG+ FQL DD+LD Sbjct: 196 LISKSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLD 237 >gi|332702907|ref|ZP_08422995.1| Trans-hexaprenyltranstransferase [Desulfovibrio africanus str. Walvis Bay] gi|332553056|gb|EGJ50100.1| Trans-hexaprenyltranstransferase [Desulfovibrio africanus str. Walvis Bay] Length = 334 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 20/187 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L CA + ++E +H +L+HDD+ +D +RRGK H Sbjct: 53 GGKRLRPVLAILCARALGHKGEAIYPLACSLEFLHSATLLHDDI--LDGAVLRRGKAAAH 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 I + A++AG+ LL A ++++S P+ L+ + + + G++ Sbjct: 111 IVFSRTEAVLAGDVLLALANQLVASYGDPR------------LTTCLSEAIMRTVAGEVA 158 Query: 166 DIQD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 +I + E + ++ I KT L+ +C GA++A S + FG N+GI FQ Sbjct: 159 EIVNTREMDSSLETYLHIITGKTAYLLEASCVVGALLAGVSDELIKAASVFGLNMGIAFQ 218 Query: 223 LADDLLD 229 + DD +D Sbjct: 219 IVDDAMD 225 >gi|164690679|dbj|BAF98629.1| octaprenyl diphosphate synthase [Streptomyces argenteolus] Length = 357 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 18/246 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDL---LLQTASHM--------QTQHNDRLLSAIRYAL-LG 49 GG + +E S ID +L ++ + HM ++ + + YAL Sbjct: 7 GGGQRALTEEASVSIDAVLKEMHGYVANARRHMTSAFDELAESWQTSPVRDVVHYALDEP 66 Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR + + RV A IE H SL+HDDL +D RR P+V Sbjct: 67 GKMIRPTITLAACQAVGGDPEMFGRVAAGIEYGHLASLMHDDL--IDEDATRRRIPSVWN 124 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-LDIQ 168 + +A+IAG+ LL AF ++ + + I + ++T + G+ G + + + Sbjct: 125 AFGVPSAVIAGDLLLFTAFHALACQQGVPAERI-VRTFEAVTRS-GVDACFGTSLEMALA 182 Query: 169 DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 T+ ++ + KTGA++ E GA++ S + LR +GE+LG+ FQ+ DD+ Sbjct: 183 GNISISTETYLKMAAGKTGAVLRGCSEGGAVIGGGSPRQIASLRDYGEDLGVAFQIIDDV 242 Query: 228 LDCEED 233 L E D Sbjct: 243 LPYESD 248 >gi|28393675|gb|AAO42250.1| putative geranyl diphosphate synthase (GPPS) (dimethylallyltransferase) [Arabidopsis thaliana] Length = 322 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L + LT R+G IE IH SLIHDD+ +D +RR Sbjct: 40 GGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRR 97 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G+ TVH + A++AG+ + A ++ N+ + ++ L + ++ G Sbjct: 98 GRETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 148 Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F + ++ +M++ KT +L+ + + AI + E++ FG+NLG+ Sbjct: 149 EIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGL 208 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 209 SFQVVDDILD 218 >gi|319778972|ref|YP_004129885.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9] gi|317108996|gb|ADU91742.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9] Length = 321 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLF----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK+IR ++ + +++HL A A IE IH +L+HDD+ +D +RRG Sbjct: 43 GGKRIRPAMLLMMSKALGYEGSLHHLMA----AVIEFIHTSTLLHDDV--VDESDMRRGS 96 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ L + +FE++ D++R ++S + +G + Q+ Sbjct: 97 ATANAVFGNAASVLVGDYLYSRSFEMMVEA-----DSMRIMQIMSEATTVIAEGEVL-QL 150 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 L++ D +D + + K KT L A A++A A +++ +G ++G FQ+ Sbjct: 151 LNVHDPNVDFDRYMDVIKSKTAKLFEAATRVAAVLAGADDAVEQKAALYGTHVGTAFQVI 210 Query: 225 DDLLD---CEEDLPK 236 DD+LD EDL K Sbjct: 211 DDVLDYSGSAEDLGK 225 >gi|224437780|ref|ZP_03658727.1| hypothetical protein HcinC1_07400 [Helicobacter cinaedi CCUG 18818] Length = 303 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 29/204 (14%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 ND +L+ + L GK +RS L+ + + +LR A IE I SL+HDD+ + Sbjct: 23 NDEVLN-LSSHLSQGKMLRSKLLLAISGVSE----DSLRACALIEMIQSASLLHDDV--I 75 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNI 154 D RR KP+++ + AI+ G+ L + AF +S +L ++ S ++ LS+ Sbjct: 76 DEAQTRRQKPSINALFGNKNAIMLGDVLYSKAFYELSCLDVRLAQSVSSAVVRLSI---- 131 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKER 209 G++ D+ F + Q ++ KM KT AL+ A E GAI+ ++N Sbjct: 132 -------GEIEDVSLASRFHIDKQAYI--KMCGNKTAALIVAAAECGAILKGLNKN---I 179 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 R +GENLGI FQ+ DD+LD +D Sbjct: 180 YRIYGENLGIAFQIIDDILDFTQD 203 >gi|297192769|ref|ZP_06910167.1| isoprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC 25486] gi|197721043|gb|EDY64951.1| isoprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC 25486] Length = 336 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 27/194 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVMLAAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEADVRRGVDSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++ A++ G+ L A I++ + +R Q + ++ GQ+L Sbjct: 111 TRWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILETA 160 Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D D ++D + KTG+L+ + GA+M+ A + + L +GE LG+ Sbjct: 161 GPRDGRDPVDHYLD------VMAGKTGSLVAVSVRFGAMMSGADERVVDTLTQYGERLGV 214 Query: 220 IFQLADDLLDCEED 233 FQLADD+LD D Sbjct: 215 AFQLADDVLDIASD 228 >gi|251796421|ref|YP_003011152.1| trans-hexaprenyltranstransferase [Paenibacillus sp. JDR-2] gi|247544047|gb|ACT01066.1| Trans-hexaprenyltranstransferase [Paenibacillus sp. JDR-2] Length = 324 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 117/229 (51%), Gaps = 32/229 (13%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-- 64 S++++ +R + D+LL +T+ H LL A GGK++R V Sbjct: 15 SRIEQELERSISFGDELLSETSLH--------LLKA------GGKRLRPVFVLLAGKFGQ 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 ++++ LT +V +E IH SL+HDD+ +D+ RRG+ TV ++D A+ G+ + Sbjct: 61 YDLDKLT--KVAVPLELIHMSSLVHDDV--IDDASTRRGQLTVKSKWDNRIAMYTGDYIF 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQ- 181 A I+ T+L D Q MLS + L M G+M I+ F E + ++++ Sbjct: 117 GRALTIV----TELDDPFIHQ-MLSKS----LVQMSIGEMEQIRYFFNTEQTIRDYLLRI 167 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + KT L+ +C+ GA A A + RL +G N+G+ FQ+ DD+LD Sbjct: 168 RRKTALLIAISCQLGAAAAGADRATLNRLYRYGYNVGMTFQIRDDMLDL 216 >gi|218258587|ref|ZP_03474930.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii DSM 18315] gi|218225357|gb|EEC98007.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii DSM 18315] Length = 324 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 14/205 (6%) Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86 A+ ++++ N RL SAI L GK IR LV A + +E +H + Sbjct: 23 AASLRSETN-RLQSAIDQILNASGKHIRPLLVLLAAKACGQVTDNTINSAVLLELLHTAT 81 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 LIHDD+ +D RRG P+++ +D +++ G+ +L+ A +I S +T N++ Sbjct: 82 LIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTA--LIRSIQT---GNLQ--- 131 Query: 147 MLSLTHNIGLQGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++ + N+G G Q+ ++ IDE+ + + KT L+ E G+I A AS Sbjct: 132 IIGIVSNLGRDLSEGEIKQLETAEESIIDESCYMQVIRKKTAMLLSACSEIGSISAGASG 191 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 E+ R FGE LG FQ+ DD+ D Sbjct: 192 EMVEKCREFGEYLGYCFQIKDDIFD 216 >gi|225872538|ref|YP_002753993.1| farnesyltranstransferase [Acidobacterium capsulatum ATCC 51196] gi|225793159|gb|ACO33249.1| farnesyltranstransferase [Acidobacterium capsulatum ATCC 51196] Length = 307 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 2/182 (1%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 G IR+ L +++ + + A+E H SL+ DDLP MD+ +RRG +H Sbjct: 43 GNMIRAELAFRLGRSYDLPGACSEHLAIAVEYFHTASLLFDDLPCMDDATLRRGAACIHH 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 Y E AI+ L+ +A+ ++ R++ + + H +GL G+L GQ D+ Sbjct: 103 TYGEGAAILTALALVNHAYGLLWKGVAHSSAEARTRTLEYVEHQLGLAGLLNGQSRDLHM 162 Query: 169 DEFIDETQVF-MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 E + +++ I KT +L+ A AI A + E+ L G+ +Q+ DDL Sbjct: 163 REASRQPRIYQQIAIGKTVSLIRMALVVPAIAGGAGEYEQCLLDRLAIAWGLSYQILDDL 222 Query: 228 LD 229 D Sbjct: 223 KD 224 >gi|330504899|ref|YP_004381768.1| polyprenyl synthetase [Pseudomonas mendocina NK-01] gi|328919185|gb|AEB60016.1| polyprenyl synthetase [Pseudomonas mendocina NK-01] Length = 322 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + A IE +H +L+HDD+ M + +RRG+ T + Sbjct: 43 GGKRLRPLLVLLSGRALGYQADDLRLLAATIEFLHTATLLHDDVVDMSD--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Q+ +++ G+ L + +FE++ +L +++ T I +L Q+ ++ Sbjct: 101 AQWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMKILSHATRVIAEGEVL--QLSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + + A +A A++ ++E LR FG++LGI FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHAAAALAGANEAQREALRTFGDHLGIAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYKGD 219 >gi|300782468|ref|YP_003762759.1| trans-hexaprenyltranstransferase [Amycolatopsis mediterranei U32] gi|299791982|gb|ADJ42357.1| trans-hexaprenyltranstransferase [Amycolatopsis mediterranei U32] Length = 350 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 15/184 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R A + AA+E +H +L HDD+ MD +RRG +V+ Sbjct: 72 GGKRFRPLFTLLAAQFGPKQDDHVIVAAAAVELVHLATLYHDDV--MDEATMRRGAESVN 129 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D AI+ G+ L +A +++ T I +T GQM + Sbjct: 130 ARWDNTIAILTGDFLFAHASRLVADLGTDAARIIAETFGELVT----------GQMRETV 179 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + V + KTG+L+ + G +M+ A++ E LR FG+ +G FQ++D Sbjct: 180 GPGPGDDAVAHYLTVIAQKTGSLIATSGRFGGMMSGAAEEHIEALRRFGDIIGTAFQISD 239 Query: 226 DLLD 229 D++D Sbjct: 240 DIID 243 >gi|256425937|ref|YP_003126590.1| trans-hexaprenyltranstransferase [Chitinophaga pinensis DSM 2588] gi|256040845|gb|ACU64389.1| Trans-hexaprenyltranstransferase [Chitinophaga pinensis DSM 2588] Length = 321 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 15/188 (7%) Query: 50 GKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK+IR V A LFN N + R A +E +H +L+HDD+ +D+ RRG +++ Sbjct: 42 GKQIRPMFVLLSAKLFNNNIQESTYRAAALVELLHTATLVHDDV--VDDANERRGFFSIN 99 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ LL+ ++S + RS +LS ++ M G++L I+ Sbjct: 100 ALWKNKIAVLVGDYLLSKGL-LLSVDNNEF----RSLKILSE----AVKEMSEGELLQIE 150 Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 I E F I + KT +L+ AC +GA E++R FGE +G+ FQ+ D Sbjct: 151 KTRKLNIKEDIYFEIIRRKTASLLASACAAGAWSTTNDDETTEKMRLFGEKVGVAFQIKD 210 Query: 226 DLLDCEED 233 DL D D Sbjct: 211 DLFDYGSD 218 >gi|296132634|ref|YP_003639881.1| Trans-hexaprenyltranstransferase [Thermincola sp. JR] gi|296031212|gb|ADG81980.1| Trans-hexaprenyltranstransferase [Thermincola potens JR] Length = 323 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 32/214 (14%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 + LL +T+ H+ RL A +ALL GK + +++ L L V A+E Sbjct: 30 EKLLSETSGHLLNAGGKRLRPA--FALLAGKTFQ----------YDLEKLLPLAV--ALE 75 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH +L+HDD+ +D RRG PTV ++ ++ G+ + + I+ Sbjct: 76 LIHMATLVHDDV--VDASVTRRGIPTVKAKWGNQVSVYTGDFIFGQSLIQIARCNNTKIA 133 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFMIQKMKTGALMCFACES 195 I + + + ++ G+++ ++ F D Q +F I++ KT L+ +CE Sbjct: 134 EILADVSVKMSE---------GEIVQLRTTF-DPKQSLRDYLFRIKR-KTALLISASCEL 182 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA+ A A +N LR +G LG+ FQ+ DD+LD Sbjct: 183 GALAAGAPENFIRALRWYGYYLGMAFQITDDILD 216 >gi|159470571|ref|XP_001693430.1| solanesyl diphosphate synthase [Chlamydomonas reinhardtii] gi|158282933|gb|EDP08684.1| solanesyl diphosphate synthase [Chlamydomonas reinhardtii] Length = 394 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 14/187 (7%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGKK+R FLV C A + LT R+ E IH SL+HDD+ +D IRR Sbjct: 112 GGKKLRPVIVFLVAHCTAQREGLTELTEKHRRLAEITEMIHTASLVHDDV--LDECDIRR 169 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK T++ Y A++AG+ L + +++ DN+ ++S G + Sbjct: 170 GKQTINSMYGTRVAVLAGDFLFAQSSWFLAN-----LDNLEVIKLISQVIADFANGEIS- 223 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q + D I Q KT +L+ +C S A+ + + KE + +G++LG+ FQ Sbjct: 224 QAASLFDTDITLEQYLDKSFYKTASLIAASCRSAAVFSDSPVEVKEAMYAYGKHLGLAFQ 283 Query: 223 LADDLLD 229 + DD+LD Sbjct: 284 VVDDILD 290 >gi|332528440|ref|ZP_08404432.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624] gi|332042119|gb|EGI78453.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624] Length = 316 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + + + A +E IH +L+HDD+ +D+ +RRG PT + Sbjct: 30 GGKRLRPALLLLVSGALDYRGPHRHSLAAVVEFIHTATLLHDDV--VDDSKLRRGNPTAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ ++ +R +L+ N+ +G + Q++++ Sbjct: 88 ETFGNAASVLVGDFLYSRAFQMMVEAQS-----MRVMEVLAEATNVIAEGEVQ-QLMNMH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + ++E + + KT L + GAI+A A + + +G+ LG FQ+ DD+L Sbjct: 142 NADLNEAGYVHVIRSKTAKLFEASARCGAILAGADKTLEAACADYGQALGTAFQVIDDVL 201 Query: 229 DCEED 233 D D Sbjct: 202 DYAGD 206 >gi|313144226|ref|ZP_07806419.1| polyprenyl synthetase family protein [Helicobacter cinaedi CCUG 18818] gi|313129257|gb|EFR46874.1| polyprenyl synthetase family protein [Helicobacter cinaedi CCUG 18818] Length = 297 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 29/204 (14%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 ND +L+ + L GK +RS L+ + + +LR A IE I SL+HDD+ + Sbjct: 17 NDEVLN-LSSHLSQGKMLRSKLLLAISGVSE----DSLRACALIEMIQSASLLHDDV--I 69 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNI 154 D RR KP+++ + AI+ G+ L + AF +S +L ++ S ++ LS+ Sbjct: 70 DEAQTRRQKPSINALFGNKNAIMLGDVLYSKAFYELSCLDVRLAQSVSSAVVRLSI---- 125 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKER 209 G++ D+ F + Q ++ KM KT AL+ A E GAI+ ++N Sbjct: 126 -------GEIEDVSLASRFHIDKQAYI--KMCGNKTAALIVAAAECGAILKGLNKN---I 173 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 R +GENLGI FQ+ DD+LD +D Sbjct: 174 YRIYGENLGIAFQIIDDILDFTQD 197 >gi|330823512|ref|YP_004386815.1| trans-hexaprenyltranstransferase [Alicycliphilus denitrificans K601] gi|329308884|gb|AEB83299.1| Trans-hexaprenyltranstransferase [Alicycliphilus denitrificans K601] Length = 349 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + A +E IH +L+HDD+ +D +RRG+PT + Sbjct: 70 GGKRLRPALLLLTCGALEYKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTAN 127 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ ++R +L+ N+ +G + Q+++ Sbjct: 128 EAFGNPASVLVGDFLHTRSFQMMVE-----AGSMRILQVLADATNVIAEGEVQ-QLMNTH 181 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + KT L + AI+A ++ + ++ +G+ LG FQ+ DD+L Sbjct: 182 DASLDEAGYLHVIRSKTAKLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVL 241 Query: 229 DCEED 233 D + D Sbjct: 242 DYDGD 246 >gi|20808838|ref|NP_624009.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter tengcongensis MB4] gi|254478179|ref|ZP_05091561.1| polyprenyl synthetase superfamily protein [Carboxydibrachium pacificum DSM 12653] gi|20517490|gb|AAM25613.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter tengcongensis MB4] gi|214035908|gb|EEB76600.1| polyprenyl synthetase superfamily protein [Carboxydibrachium pacificum DSM 12653] Length = 322 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 16/203 (7%) Query: 32 QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 + + +++L+S I ++ GK +R V A N + L + AAIE +H +L+H Sbjct: 25 RVKSSNKLISDILLDMVNNSGKMLRPAFVIISAKFGNYDRKKILPLAAAIEMLHMATLVH 84 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +DN IRR KPT+ +Y + A+ G+ L + +F ++S DNI + Sbjct: 85 DDI--IDNALIRRSKPTIQAEYGKDYAVFIGDFLFSQSFLLLS-------DNINVANLKK 135 Query: 150 LTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNE 206 ++ + + G++ + + I+ T ++++ KT AL + GA ++ + Sbjct: 136 VSKVVS--RICKGEIDQFESRYDINITINDYLKRIAAKTAALFALSFYVGAYESNCGEEL 193 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 + L G N+GI FQ+ DD+LD Sbjct: 194 AKILGSIGYNIGIAFQIIDDILD 216 >gi|260775534|ref|ZP_05884431.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260608715|gb|EEX34880.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 323 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 10/206 (4%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 H Q + L++ + + ++ GGK+IR L A A IE IH +L Sbjct: 22 HAQLNSDVSLINQLGFYIISGGGKRIRPLLAVLSARALGYQGQAHTTAAAFIEFIHTATL 81 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ + Sbjct: 82 LHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKL 134 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +S NI +G + Q+++ D E + KT L A + GAI+ A + Sbjct: 135 MSDAVNIIAEGEVQ-QLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPSEVE 193 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L+ +G+ LG FQL DD++D D Sbjct: 194 TALQNYGKYLGTAFQLIDDVMDYTSD 219 >gi|163753001|ref|ZP_02160125.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1] gi|161326733|gb|EDP98058.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1] Length = 325 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 18/186 (9%) Query: 50 GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R FLV++ S VN T R + IE IH +L+HDD+ +D+ RRG + Sbjct: 45 GKQMRPMFVFLVSKMVSDGLVNDRT-YRGASVIELIHTATLVHDDV--VDDSNRRRGFFS 101 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ + A++ G+ LL+ ++S DN L+ ++ + ++ M G++L Sbjct: 102 INALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLKIIS--VAVREMSEGELLQ 152 Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+ I E + I + KT L+ C GA +AS E E LR FGE +G+ FQ+ Sbjct: 153 IEKARKLDITEDVYYEIIRQKTATLIAACCAMGAKSVNASDEEVENLRLFGEYIGMAFQI 212 Query: 224 ADDLLD 229 DDL D Sbjct: 213 KDDLFD 218 >gi|332188683|ref|ZP_08390398.1| polyprenyl synthetase family protein [Sphingomonas sp. S17] gi|332011300|gb|EGI53390.1| polyprenyl synthetase family protein [Sphingomonas sp. S17] Length = 336 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + + AA+E IH +L+HDD+ +D +RRG+ T + Sbjct: 55 GGKRMRPMLTLASAQLLGYRGTSHHVLAAAVEFIHTATLLHDDV--VDGSDLRRGRRTAN 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + +++ G+ L + +F+++ + NI LS + +G + Q+ ++ Sbjct: 113 IIWGNPASVLVGDFLFSRSFQLMVDAGSLKVLNI-----LSGASAVIAEGEVN-QLTAVR 166 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + I KT AL AC A++A + E+ L +G NLGI FQL DD + Sbjct: 167 QVGLPEERYLSIIDAKTAALFAAACRIAAVVAERPEAEELALEAYGRNLGIAFQLIDDAI 226 Query: 229 DCEED 233 D D Sbjct: 227 DYVSD 231 >gi|254523411|ref|ZP_05135466.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14] gi|219721002|gb|EED39527.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14] Length = 332 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPMLVMLAGHAVGHAGPDHHQLAAIIEFIHTSTLLHDDV--VDESNLRRGRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L+ Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELERMPVMQILADATNRIAEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DET + + KT L GA+ + + ++ L +G +LG FQ+ADD+L Sbjct: 165 NPDTDETAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDYGMHLGYAFQIADDVL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|5734760|gb|AAD50025.1|AC007651_20 Very similar to prenyl transferase [Arabidopsis thaliana] Length = 379 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L + LT R+G IE IH SLIHDD+ +D +RR Sbjct: 97 GGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRR 154 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G+ TVH + A++AG+ + A ++ N+ + ++ L + ++ G Sbjct: 155 GRETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 205 Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F + ++ +M++ KT +L+ + + AI + E++ FG+NLG+ Sbjct: 206 EIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGL 265 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 266 SFQVVDDILD 275 >gi|145300249|ref|YP_001143090.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853021|gb|ABO91342.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp. salmonicida A449] Length = 323 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPMLTVMAARALGYEGQDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++S N+R +LS N +G + Q+++ Sbjct: 101 ALFGNAASVLVGDYLYSRSFQMMSELS-----NLRVMEILSDATNTIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++ H + ++ + +G+ LG FQ+ DD++ Sbjct: 155 DPDTTEQSYMTVIYCKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDVM 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|228470958|ref|ZP_04055803.1| octaprenyl-diphosphate synthase [Porphyromonas uenonis 60-3] gi|228307355|gb|EEK16369.1| octaprenyl-diphosphate synthase [Porphyromonas uenonis 60-3] Length = 318 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 18/190 (9%) Query: 49 GGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK +R +V CA L N T L IE +H SLIHDD+ +D RRG+PT Sbjct: 37 SGKHVRPIIVGLCAQLCAGQTNERT-LAAALVIELLHTASLIHDDV--IDWSDTRRGQPT 93 Query: 107 VHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 ++ Y A++ G+ +L+ AF EI+S +Q ML + G + + G+++ Sbjct: 94 LNALYSNHQAVLMGDYVLSTAFLEIVSREH--------NQEMLRVVAQAG-RNLSIGELM 144 Query: 166 DI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + + E + + KTG L + + GA+ +A+ E ER G+ +G FQ Sbjct: 145 QLSLSKAHTYREEDYYAVVDRKTGTLFEASAKLGALSVNATDEEVERCARLGQLMGRAFQ 204 Query: 223 LADDLLDCEE 232 L DDL D ++ Sbjct: 205 LQDDLFDYDK 214 >gi|198274095|ref|ZP_03206627.1| hypothetical protein BACPLE_00232 [Bacteroides plebeius DSM 17135] gi|198273173|gb|EDY97442.1| hypothetical protein BACPLE_00232 [Bacteroides plebeius DSM 17135] Length = 326 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 10/184 (5%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A LF + + ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 47 GKMMRPILVMLTAKLFGTLNESTFHAALSLELLHTASLVHDDV--VDESDKRRGQSSVNA 104 Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y+ +++ G+ +L + + + + K +L +L+ +L + +L Q+ +I Sbjct: 105 IYNNKVSVLVGDYMLATSLKHAALTGKVEL-----VELVATLGQELSEGEIL--QLGNIG 157 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E E F + + KT AL + +SGA+ A Q E + GE +GI FQ+ DD+ Sbjct: 158 KEDFSEEAYFDVIRKKTAALFKASSQSGAVSVGAVQEEVMKAGLLGEMIGIAFQIKDDIF 217 Query: 229 DCEE 232 D E Sbjct: 218 DYFE 221 >gi|113869207|ref|YP_727696.1| trans-hexaprenyltranstransferase [Ralstonia eutropha H16] gi|113527983|emb|CAJ94328.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha H16] Length = 328 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 49 GGKRLRPVILLLTARAMGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ ++R +LS N+ +G + Q+L++ Sbjct: 107 AVFGNAASVLVGDFLYSRAFQMMVD-----AGSMRIMEILSNATNVIAEGEVL-QLLNMH 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + KT L A + GA++A A +E +G +G FQL DD+L Sbjct: 161 DPDVTVERYLQVIRYKTAKLFEAAAQLGAVLAGADAQMEEAAAEYGRRIGTAFQLIDDML 220 Query: 229 D 229 D Sbjct: 221 D 221 >gi|167764030|ref|ZP_02436157.1| hypothetical protein BACSTE_02413 [Bacteroides stercoris ATCC 43183] gi|167698146|gb|EDS14725.1| hypothetical protein BACSTE_02413 [Bacteroides stercoris ATCC 43183] Length = 324 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 14/186 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A L+N L A+E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILVLLAAKLYNEICPATLHAAVALELLHTASLVHDDV--VDESTERRGQLSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166 ++ A++ G+ LL A + R+ ++ + +G Q + G++L + Sbjct: 103 VFNNKVAVLTGDYLLATALVEVGMT--------RNYGIIDIVSKLG-QDLAEGELLQLSN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + E F + + KT L ++GA+ A + E R FGE +G+ FQ+ DD Sbjct: 154 VSNPEYSEDIYFDVIRKKTAVLFAACMKAGALSVGAGDEKAEYARLFGEYIGLCFQIKDD 213 Query: 227 LLDCEE 232 + D E Sbjct: 214 IFDYYE 219 >gi|221633012|ref|YP_002522237.1| heptaprenyl diphosphate synthase component II [Thermomicrobium roseum DSM 5159] gi|221155353|gb|ACM04480.1| heptaprenyl diphosphate synthase component II [Thermomicrobium roseum DSM 5159] Length = 334 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 20/161 (12%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A IE +H SLIHDD S+D +RRG+PT++ +D I+ G+ + + + +S Sbjct: 77 AAAGIELLHTASLIHDD--SLDGASVRRGQPTLNALFDPSVVIMVGDYMFARSAMLAAS- 133 Query: 135 KTQLKDNIRSQLMLSLTHNIG------LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 + +++ H +G L+ + + D+ +D+ Q + K T +L Sbjct: 134 ------TMNPRVLAVFAHCLGSICDGQLRELFAARRTDVS---LDDYQHRIYGK--TASL 182 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + E GAI+A A ++ E LR FG +G+ FQ+ DD+LD Sbjct: 183 FAGSAEIGAILAEAPDDQIELLRDFGGAMGMAFQIVDDVLD 223 >gi|325964291|ref|YP_004242197.1| geranylgeranyl pyrophosphate synthase [Arthrobacter phenanthrenivorans Sphe3] gi|323470378|gb|ADX74063.1| geranylgeranyl pyrophosphate synthase [Arthrobacter phenanthrenivorans Sphe3] Length = 366 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 17/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L CA L + + ++ +E H +L HDD+ MD+ RRG PT H Sbjct: 84 GGKRIRPLLTLLCAHLGDASLPAVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAH 141 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + A++ G+ + A ++S ++ L R+ L L GQ+ + Sbjct: 142 EVWGNSVAVLTGDLIFARASILVSELGSRALGIQARTFERLCL-----------GQLHET 190 Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 DE + + KTG+L+ + + GAI A A + L +GE +G+ FQLA Sbjct: 191 VGPRPDEDPIEHYLSVIADKTGSLVAASGQLGAIFAEADPAFEPVLVEYGEKVGVAFQLA 250 Query: 225 DDLLDC 230 DD++D Sbjct: 251 DDVIDV 256 >gi|117617957|ref|YP_855472.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559364|gb|ABK36312.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 323 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPMLTVMAARALGYEGEDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++S N+R +LS N +G + Q+++ Sbjct: 101 ALFGNAASVLVGDYLYSRSFQMMSELS-----NLRVMEILSDATNTIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++ H + ++ + +G+ LG FQ+ DD++ Sbjct: 155 DPDTTEESYMTVIYCKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDVM 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|282861046|ref|ZP_06270111.1| Dimethylallyltranstransferase [Streptomyces sp. ACTE] gi|282563704|gb|EFB69241.1| Dimethylallyltranstransferase [Streptomyces sp. ACTE] Length = 349 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 13/184 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV A + +ALR A+E +H ++L+HDD+ +D RR +PT Sbjct: 64 GKAIRPALVLAAARALGGDPESALRAAVAVELVHNFTLLHDDV--IDEDATRRHRPTAWA 121 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + A++ G+ +L A +++ + + R+ LS + + GQ D Sbjct: 122 VFGVPDAVVTGDAVLALAQRLLA--EDPHPGSARASARLSAC----VIELCAGQQADCAL 175 Query: 168 -QDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + E +D T + + KTGAL+ AC GA+ A A + E + FG G+ FQL Sbjct: 176 EEREPLDVTLDECLTMATAKTGALLGCACALGALYAGADEPAVEAMDGFGREAGLAFQLI 235 Query: 225 DDLL 228 DDL+ Sbjct: 236 DDLI 239 >gi|320009184|gb|ADW04034.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331] Length = 336 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 9/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV + + + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVMLASQFGDPDAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVDSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A++ G+ L A I++ + I+++ L L+ D Sbjct: 111 TRWGNSVAVLTGDFLFARASHILADLGPEAV-RIQAEAFERLVTGQILETAGPRDGRDPV 169 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D ++D + KTG+L+ + GA+MA A ++ + L +GE LGI FQLADD+L Sbjct: 170 DHYMD------VLGGKTGSLVAVSGRFGALMAGADESVVDILTQYGERLGIAFQLADDVL 223 Query: 229 DCEED 233 D D Sbjct: 224 DIASD 228 >gi|269926471|ref|YP_003323094.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269790131|gb|ACZ42272.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 322 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L S +R +L GGK++R LV S+ + +H L A+E +H +LIHDD ++D Sbjct: 32 LASVVRSLILAGGKRLRPALVFLSGSINSPDHEKLLNAAVAVELLHTATLIHDD--TIDQ 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG T + + I+ G+ L A + ++ +++++ + + Sbjct: 90 ADVRRGIATANSIFGPGVVILLGDFLFAKAAHYAAMTSDPEAIDLFAKVLMVI-----VD 144 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 G L Q L + E + + KT AL E+GAI++ A + + L +G+ L Sbjct: 145 GELR-QSLGKHNGVPSEEEYYRRIYAKTAALFECCTETGAILSKAPEPHRRALTTYGKKL 203 Query: 218 GIIFQLADDLLD 229 G+ FQ+ DDLLD Sbjct: 204 GLAFQIIDDLLD 215 >gi|195953287|ref|YP_002121577.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1] gi|195932899|gb|ACG57599.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 312 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 19/192 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L+ + A+ +G IE IH SL+HDD+ +D RRGKP+V+ Sbjct: 40 GGKRIRPLLLVYLVESLGGDVDKAIILGCGIEYIHIASLLHDDV--VDKADSRRGKPSVN 97 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + A++ G+ L A + ++ +I S+ ++++ GQ+L+++ Sbjct: 98 KVFGQEAAVLTGDYLYAKALFLYANYGNAKMIDILSKAVMNMAE---------GQLLELK 148 Query: 169 D--EFIDETQVFMIQKMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 IDE F I KT L+ CF GA++++ E E+ G LG FQL Sbjct: 149 SIGSIIDEKTYFDIIDGKTAYLIGACFGV--GALISN--YEEYEKFFDIGLKLGRAFQLI 204 Query: 225 DDLLDCEEDLPK 236 DD LD E D K Sbjct: 205 DDALDYEVDSQK 216 >gi|330811830|ref|YP_004356292.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379938|gb|AEA71288.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 322 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDMRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ + I SQ + LQ + ++ Sbjct: 101 AMWGNAPSVLVGDFLYSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQ------LSKVR 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L + S A +A AS + E LR FG++LG+ FQL DDLL Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALAGASAEQSEALRTFGDHLGVAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYKGD 219 >gi|315605114|ref|ZP_07880166.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313221|gb|EFU61286.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 180 str. F0310] Length = 337 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 18/190 (9%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 A+ GGK++R L CA L + L A+E H SL HDD+ MD+ RR Sbjct: 47 AVAGGKRMRPLLTLVCAQLGESDRRLDDAVLTAATAVELTHLASLYHDDV--MDSAPTRR 104 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G P+ + AI+AG+ L A +++S ++ + H + + G Sbjct: 105 GVPSAQHLWGNNRAILAGDILFARASLLVASLGPEIVAH----------HARTFERLCQG 154 Query: 163 QMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 Q+ + +V F +Q + KTG+L+ A GA+++ A + + + FGE +G+ Sbjct: 155 QLNETFGPTHGADRVDFYLQVLADKTGSLVSTAASFGALLSGAGRLVADVVADFGEKVGV 214 Query: 220 IFQLADDLLD 229 FQ+ADD+LD Sbjct: 215 AFQIADDVLD 224 >gi|220909327|ref|YP_002484638.1| polyprenyl synthetase [Cyanothece sp. PCC 7425] gi|219865938|gb|ACL46277.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425] Length = 989 Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 26/226 (11%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 S L +N + T+ D L+Q Q ++LS L GK+IR+ V A + Sbjct: 677 SVLDQNFQLDQTVADPALVQ-------QVVRQILS------LPGKRIRALCVYLSACVGR 723 Query: 67 VNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 ++ A + A+E +H SL+HDD+ +D RR +P+ ++ Y +I+ GN L+ Sbjct: 724 RSYPQAAENIALAVELVHAASLLHDDV--IDLAPQRRHQPSSNMVYGNAASILGGNFLVV 781 Query: 126 YAFEII-SSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 A +++ ++ + L D +R+ + L+ + L+ GQ++ ++ Q I + Sbjct: 782 QAAQLLLNTGRPGLAADLLRAVEAMILSESEQLENR--GQVI------LNPEQYLNIIRG 833 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L + C++GA +++ E L +GENLG+ FQL DDLLD Sbjct: 834 KTATLFRWGCQAGASISNHPAAVVEALARYGENLGMAFQLIDDLLD 879 >gi|145327729|ref|NP_001077840.1| SPS1 (solanesyl diphosphate synthase 1); trans-octaprenyltranstransferase [Arabidopsis thaliana] gi|332197994|gb|AEE36115.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana] Length = 367 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L + LT R+ IE IH SLIHDD+ +D +RR Sbjct: 85 GGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRR 142 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TVH + A++AG+ + A ++ N+ + ++ L + ++ G Sbjct: 143 GKETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 193 Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F +T++ ++++ KT +L+ + + AI + + E++ FG+NLG+ Sbjct: 194 EIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGL 253 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 254 SFQIVDDILD 263 >gi|114327555|ref|YP_744712.1| decaprenyl diphosphate synthase [Granulibacter bethesdensis CGDNIH1] gi|114315729|gb|ABI61789.1| farnesyl pyrophosphate synthetase [Granulibacter bethesdensis CGDNIH1] Length = 353 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 16/192 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R L A L + A + + A +E IH +L+HDD+ +D +RR Sbjct: 66 GGKRLRPLLTLASARLCGFDTALAGGVPRHVHLAACVEFIHTATLLHDDV--VDESRMRR 123 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G + + + +++ G+ L AF+++ + I S+ ++ LQ Sbjct: 124 GMASANAVFGNNASVLVGDFLFARAFQLMVEDGSLQVLAILSKAAATIAEGEVLQ----- 178 Query: 163 QMLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 L Q++ E++ + + KT +L AC+ GA++A E++ L +G +LGI F Sbjct: 179 --LATQNDLETPESRYLEVIEGKTASLFAAACQVGAVVAARPAEEEQALYDYGMSLGIAF 236 Query: 222 QLADDLLDCEED 233 QL DD LD D Sbjct: 237 QLTDDALDYAAD 248 >gi|54307607|ref|YP_128627.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum SS9] gi|46912030|emb|CAG18825.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum SS9] Length = 323 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 14/188 (7%) Query: 49 GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R LV A H+TA A +E IH +L+HDD+ +D +RRGK Sbjct: 43 GGKRLRPMLVVLAARALGYQGDKHITA---AAFVEFIHTATLLHDDV--VDESDMRRGKD 97 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T + + +++ G+ + T +F++++S ++ ++ ++S N+ +G + Q++ Sbjct: 98 TANAAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEVQ-QLM 151 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D E + KT L A + AI+ +S + L+ +G LG FQL D Sbjct: 152 NCNDPNTTEDNYMQVIYSKTARLFEAATQISAIITESSTEVEVALQDYGRYLGTAFQLID 211 Query: 226 DLLDCEED 233 D+LD D Sbjct: 212 DVLDYVAD 219 >gi|85858101|ref|YP_460303.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / decaprenyl diphosphate synthase [Syntrophus aciditrophicus SB] gi|85721192|gb|ABC76135.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / decaprenyl diphosphate synthase [Syntrophus aciditrophicus SB] Length = 324 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R L+ A LF + A +E IH SL HDD+ +D RRGK + + Sbjct: 43 GGKRFRPLLLLISADLFGYQGRRCHTLSAVLEFIHTASLFHDDV--IDKAESRRGKVSAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++ G+ L + A+++++ ++ ++S T N+ +G + Q++ Sbjct: 101 NIWGNAAVVLVGDFLYSKAYQLMAE-----DGSMEIMHLISTTSNVMSEGEVF-QLIKCG 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + E I + KT L+ AC G + A ++ E L+ FG LG FQ+ DD L Sbjct: 155 EVNLTEEDYLKIIEKKTAILISAACALGGYLGGAEVHQIEALKQFGLRLGSAFQMTDDTL 214 Query: 229 DC---EEDLPK 236 D EED K Sbjct: 215 DYVAREEDFGK 225 >gi|284034155|ref|YP_003384086.1| trans-hexaprenyltranstransferase [Kribbella flavida DSM 17836] gi|283813448|gb|ADB35287.1| Trans-hexaprenyltranstransferase [Kribbella flavida DSM 17836] Length = 340 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 21/230 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L S+++ +R++ L D Q+ + TQ ++ A GGK+ R LV A Sbjct: 19 ALESRVRAGLERVEQALRDST-QSEAPFVTQAAQHVMVA------GGKRFRPLLVLLAAE 71 Query: 64 LFNVNHLTALRVGAAIECI-HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 T + A + + H +L HDD+ MD +RRG T + +D AI+AG+ Sbjct: 72 FGPRPTATEVVDAAVVVELTHVATLHHDDV--MDEAALRRGSSTANAAWDNSVAILAGDW 129 Query: 123 LLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 L A ++++S P+ I+++ L + + G+ D ++ + Sbjct: 130 LFAKASDLVASLGPEAV---RIQARTFGRLVEGQIRETLGVGEGQDPLAHYLS------V 180 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG+L+ + GA A A +E LR FGE +G FQLADD+LD Sbjct: 181 VADKTGSLIATSALFGARFAGAPAEVQEALRAFGEEIGTAFQLADDILDV 230 >gi|315305700|ref|ZP_07875309.1| heptaprenyl diphosphate synthase component 2 [Listeria ivanovii FSL F6-596] gi|313625931|gb|EFR95454.1| heptaprenyl diphosphate synthase component 2 [Listeria ivanovii FSL F6-596] Length = 169 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 88/161 (54%), Gaps = 13/161 (8%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+ + AA+E +H +LIHDD+ +D+ +RRG PT+H +Y A+ G+ L F+I+ Sbjct: 2 AVSIAAALEVLHMATLIHDDV--VDDSPMRRGIPTIHSKYGRNYAVYTGDYLFCICFKIL 59 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGAL 188 SS + + +NI + NI + +L G++ ++ + +D T + ++ KT L Sbjct: 60 SSHSSSV-ENIEFN-----SKNI--EKILMGELDQMRTSYKMDVTVREYLSRISGKTAQL 111 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +C SGA + AS+ + G LG+ FQ+ DD+LD Sbjct: 112 FALSCYSGAAGSKASRMTVAKCYNIGHYLGMAFQIIDDVLD 152 >gi|116617356|ref|YP_817727.1| geranylgeranyl pyrophosphate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096203|gb|ABJ61354.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 332 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 16/196 (8%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +AIR GK +R L + L + + A+ +GA+IE +H +LIHDD+ +D Sbjct: 40 NAIRSQASAGKLVRPALTLLFSELTDAPYNQKAIVLGASIELLHLATLIHDDI--IDESK 97 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+ ++ + + TA+ AG+ LLT +++ DNI++ L+L L+ + Sbjct: 98 LRRGQDSIQAHFGKDTAVYAGDYLLTGMLSLLND-----ADNIQAN-KLALE---SLRNI 148 Query: 160 LGGQMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEK-ERLRCFGE 215 L G++ + ++ +T ++ Q KT AL + GA + ++ + + GE Sbjct: 149 LFGELTQKHNRYLTDTSFDNYLTQITGKTAALFKLSVLFGATSSDGVSSQLLDVVGKLGE 208 Query: 216 NLGIIFQLADDLLDCE 231 NLGI FQL DD LD E Sbjct: 209 NLGIAFQLLDDYLDFE 224 >gi|297155996|gb|ADI05708.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis BCW-1] Length = 365 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + A+E +H +SL+HDDL MD RR + TV Sbjct: 72 GGKAVRPALALLSAEVAGQAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 129 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A EI+ T ++ ++ + S T ++ GQ DI Sbjct: 130 KVHGPAQAILVGDALFALAGEILLELGT-VEAGRATRRLTSATRK-----LIDGQAQDIS 183 Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V +M KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 184 YEHRERVTVAECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVD 243 Query: 226 DLL 228 DLL Sbjct: 244 DLL 246 >gi|257472035|pdb|3IPI|A Chain A, Crystal Structure Of A Geranyltranstransferase From The Methanosarcina Mazei Length = 295 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 18/185 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR ++ + + + ++ +L A+E H SLIHDDL +D G +RR P+ Sbjct: 41 GGKRIRPIILLLVSEICSGSYSRSLNAALAVEXXHSASLIHDDL--LDQGLVRRNLPSAP 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM--LGGQMLD 166 ++ A++ G+ L+ + IS P + + + G G G++LD Sbjct: 99 EKFGPSGALLCGDYLIAKSIAFIS-PYGE-----------KVIQDFGKAGXDXAEGEVLD 146 Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + +DE E F KT +L + GA A + ER FG LG +Q+ Sbjct: 147 LKLEDESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIV 206 Query: 225 DDLLD 229 DD+L+ Sbjct: 207 DDILE 211 >gi|120434721|ref|YP_860408.1| polyprenyl synthetase [Gramella forsetii KT0803] gi|117576871|emb|CAL65340.1| polyprenyl synthetase [Gramella forsetii KT0803] Length = 325 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 36/195 (18%) Query: 50 GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R FLV + S +VN T R + IE IH +L+HDD+ +D+ RRG + Sbjct: 45 GKQMRPMFVFLVAKMVSEGSVNERT-YRGASVIELIHTATLVHDDV--VDDSNRRRGFFS 101 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQ 157 ++ + A++ G+ LL+ L+LS+ +N + ++ Sbjct: 102 INALWKNKIAVLVGDYLLSKG------------------LLLSIDNNDFDLLKIISVAVK 143 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M G++L I+ I E + I + KT L+ C GA NE ++R FG Sbjct: 144 EMSEGELLQIEKARRLDITEAVYYDIIRQKTATLIAACCSLGAASVKPESNEIAKMRRFG 203 Query: 215 ENLGIIFQLADDLLD 229 E +G+ FQ+ DDL D Sbjct: 204 ELIGMAFQIKDDLFD 218 >gi|22329620|ref|NP_173148.2| SPS2 (Solanesyl diphosphate synthase 2); trans-octaprenyltranstransferase [Arabidopsis thaliana] gi|34327936|dbj|BAC82428.1| solanesyl diphosphate synthase [Arabidopsis thaliana] gi|57999785|dbj|BAD88534.1| solanesyl diphosphate synthase 2 [Arabidopsis thaliana] gi|114213509|gb|ABI54337.1| At1g17050 [Arabidopsis thaliana] gi|332191414|gb|AEE29535.1| solanesyl diphosphate synthase 2 [Arabidopsis thaliana] Length = 417 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L + LT R+G IE IH SLIHDD+ +D +RR Sbjct: 135 GGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRR 192 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G+ TVH + A++AG+ + A ++ N+ + ++ L + ++ G Sbjct: 193 GRETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 243 Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F + ++ +M++ KT +L+ + + AI + E++ FG+NLG+ Sbjct: 244 EIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGL 303 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 304 SFQVVDDILD 313 >gi|240273961|gb|EER37480.1| decaprenyl-diphosphate synthase subunit 1 [Ajellomyces capsulatus H143] Length = 414 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++ + A++AG+ LL A S Sbjct: 121 RLAEITELIHTASLLHDDV--IDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRA----SV 174 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183 +L+D +L+ ++ N ++ G+ + +++ F ++T + +QK + Sbjct: 175 ALARLRDPEVIELLSTVIAN-----LIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYL 229 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K+ +L+ +C + A++ H+S E +G NLG+ FQL DD+LD Sbjct: 230 KSASLISKSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLD 275 >gi|254451056|ref|ZP_05064493.1| polyprenyl synthetase [Octadecabacter antarcticus 238] gi|198265462|gb|EDY89732.1| polyprenyl synthetase [Octadecabacter antarcticus 238] Length = 286 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 21/222 (9%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 ID +D LLL S R+ A RY GG ++R+ L + A+ N++ +L Sbjct: 18 IDAEIDRLLLPNPS--------RVADAARYHFSAGGARVRARLGLDAAATLNLSPQASLA 69 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A E +H SL+HDDL D +RRGKP+V ++ + AI G+ L++ A+ I+ Sbjct: 70 CAIAPELLHNASLVHDDL--QDGDAMRRGKPSVWSRFGKNIAISTGDLLISAAYMAIAV- 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 + L L H+ + + GQ D + I K+G L+ Sbjct: 127 ------HPYPALALCAMHD-AVSYTIDGQTQDCRSTQPTPEAYVNIAANKSGPLLALPIR 179 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I A A +E + G L I +Q DD++D +DL K Sbjct: 180 LALIAAQAPG--QETVVHAGRALAIAYQTLDDIMDRADDLAK 219 >gi|121593262|ref|YP_985158.1| dimethylallyltranstransferase [Acidovorax sp. JS42] gi|120605342|gb|ABM41082.1| Dimethylallyltranstransferase [Acidovorax sp. JS42] Length = 327 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + A +E IH +L+HDD+ +D +RRG+PT + Sbjct: 48 GGKRLRPALLLLTCGALEYKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTAN 105 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ + +R +L+ N+ +G + Q+++ Sbjct: 106 ETFGNPASVLVGDFLHTRSFQMMVEAGS-----MRILQVLADATNVIAEGEVQ-QLMNTH 159 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + KT L + AI+A ++ + ++ +G+ LG FQ+ DD+L Sbjct: 160 DASLDEAGYLHVIRSKTAKLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVL 219 Query: 229 DCEED 233 D + D Sbjct: 220 DYDGD 224 >gi|25027039|ref|NP_737093.1| putative transferase [Corynebacterium efficiens YS-314] gi|259508477|ref|ZP_05751377.1| polyprenyl synthetase [Corynebacterium efficiens YS-314] gi|23492319|dbj|BAC17293.1| putative transferase [Corynebacterium efficiens YS-314] gi|259163941|gb|EEW48495.1| polyprenyl synthetase [Corynebacterium efficiens YS-314] Length = 350 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 19/190 (10%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 A GGK+ R AS F L+ ++ +E H +L HDD+ MD +RRG Sbjct: 68 ARAGGKRFRPMFAL-LASEFGAKPLSDNVIKAAVVVEITHLATLYHDDV--MDEATMRRG 124 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-MLGG 162 P+ + ++D AI+AG+ LL +A I+S QL M ++ H G ++ G Sbjct: 125 VPSANSRWDNSVAILAGDILLAHASRIMS----QLG-------METVAHFAETFGELVTG 173 Query: 163 QMLD-IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 QM + + D +M + + KT L+ A G++ A A+ + L+ FG +G+I Sbjct: 174 QMRETVGARGGDPVDHYMKVIREKTAVLIASAGFLGSMHADATPEHVDALKKFGAAVGMI 233 Query: 221 FQLADDLLDC 230 FQ+ DD++D Sbjct: 234 FQIVDDIIDI 243 >gi|309388901|gb|ADO76781.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228] Length = 319 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 14/186 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKK+R FL+ AS + + L++G+ IE +H SL+HDD+ +DN +RRGK T Sbjct: 41 GGKKLRPFLMFLAASFGDYDQEKLLQLGSGIELLHMSSLLHDDV--IDNAKLRRGKKTAQ 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ + A+ G+ LL+ +F I + + + N+ L + G++ + Sbjct: 99 HKFGKEEAVFIGDFLLSRSFNIFFKY-------LDKSTLGKMNKNVSL--LCEGEIEQSE 149 Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +F I + + KT + GA ++ + L G +G+ FQ+ D Sbjct: 150 KKFDLEISMRDYYRRIRHKTALFFALSSYLGAYVSGVRGKKLNLLYKLGLEIGMAFQIKD 209 Query: 226 DLLDCE 231 DLLD E Sbjct: 210 DLLDFE 215 >gi|326200897|ref|ZP_08190769.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] gi|325988465|gb|EGD49289.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] Length = 335 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 19/200 (9%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 L SA R+ + GK +R+ ++ A+ + A E +H +SL+ DD+ MD Sbjct: 35 LYSAARHYMGKGKHLRALMLLLACGATGGEPSNAIDIAAGHEILHTFSLVQDDI--MDKS 92 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQ 157 RRG TVHI+Y TAI++ + L AFE + + DN + +L +G+ Sbjct: 93 EKRRGTDTVHIKYGLDTAILSADYLFLKAFESFNINFINHEFDNAKRSRLLKEILELGMV 152 Query: 158 GMLGGQMLDI---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + GQ LD+ +D+++D MI K KT C G I+A S+ Sbjct: 153 -ICEGQFLDLNFERKFSLAEDDYLD-----MIYK-KTAVFFEKVCTIGGIIADTSEENIH 205 Query: 209 RLRCFGENLGIIFQLADDLL 228 + G+ LG+ FQ+ DD+L Sbjct: 206 SISEMGKCLGMAFQIKDDML 225 >gi|325292016|ref|YP_004277880.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3] gi|325059869|gb|ADY63560.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3] Length = 338 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L AS+F +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMLTLASASMFGYEGDHHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ QV + KT AL A E G I+A + + L+ +G NLG+ FQL DD+L Sbjct: 175 DDYL---QVI---RAKTAALFAAAAEVGPIVAKTDKASRSALKSYGMNLGLAFQLVDDVL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|67866738|gb|AAY82368.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens] Length = 358 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L AS+F +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 77 GGKRLRPMLTLASASMFGYEGDHHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 134 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 135 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 194 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+++ + + KT AL A E G I+A + + L+ +G NLG+ FQL DD+L Sbjct: 195 DDYL------QVIRAKTAALFAAAAEVGPIVAKTDKASRSALKSYGMNLGLAFQLVDDVL 248 Query: 229 D 229 D Sbjct: 249 D 249 >gi|225181669|ref|ZP_03735109.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] gi|225167650|gb|EEG76461.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] Length = 320 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 31/193 (16%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IR L +L+ L V A+E IH +L+HDD+ +D +RRGKP+++ Sbjct: 41 GKRIRPALFFLSLALWKEEPQEHLSVAVALELIHSATLVHDDV--VDASKVRRGKPSINE 98 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + TA++ G+ L AFE +L+ NI L + + D+ + Sbjct: 99 AWGNHTAVLTGDYLFARAFE-----------------LLTEYGNISLIKEMSALVRDMSE 141 Query: 170 -EFIDETQVF--------MIQKM--KTGALMCFACESGAIMAHASQNEKE-RLRCFGENL 217 E + Q F +Q++ KT +SG I+A E L +G N+ Sbjct: 142 GEIQQQAQRFCTDLDIKNYLQRIAKKTARFFMVCAKSGGIVARPQDTEAICALENYGYNV 201 Query: 218 GIIFQLADDLLDC 230 G+ FQL DDLLD Sbjct: 202 GMAFQLIDDLLDV 214 >gi|4836881|gb|AAD30584.1|AC007260_15 Very similar to prenyltransferases [Arabidopsis thaliana] Length = 390 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L + LT R+ IE IH SLIHDD+ +D +RR Sbjct: 108 GGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRR 165 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TVH + A++AG+ + A ++ N+ + ++ L + ++ G Sbjct: 166 GKETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 216 Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F +T++ ++++ KT +L+ + + AI + + E++ FG+NLG+ Sbjct: 217 EIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGL 276 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 277 SFQIVDDILD 286 >gi|261854792|ref|YP_003262075.1| trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2] gi|261835261|gb|ACX95028.1| Trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2] Length = 325 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R ++ A A ++ A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 46 GGKRFRPMVLMLAAQALGGTSPWAAQMAAVVELIHTATLLHDDV--VDESTLRRGRDTAN 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AFE++ ++++ ++ T+ I +L Q++++ Sbjct: 104 ALFGNAASVLTGDFLYSRAFEMM----VEVQEPRVMAILAQATNRIAEGEVL--QLMNMG 157 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + KT L A + A++ + + L +G +LG FQL DD+L Sbjct: 158 DADVSEDRYVDVIVRKTATLFAAATQLAAVLEGQPEEVEAALTAYGLHLGTAFQLIDDVL 217 Query: 229 DCEED 233 D D Sbjct: 218 DYTGD 222 >gi|293191764|ref|ZP_06609288.1| decaprenyl diphosphate synthase [Actinomyces odontolyticus F0309] gi|292820457|gb|EFF79440.1| decaprenyl diphosphate synthase [Actinomyces odontolyticus F0309] Length = 337 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 18/190 (9%) Query: 46 ALLGGKKIRSFLVTECASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 A+ GGK++R L CA L + A+E H SL HDD+ MD+ RR Sbjct: 47 AVAGGKRMRPLLTLVCAQLGEPERGLDEQVITAATAVELTHLASLYHDDV--MDSAPTRR 104 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G P+ + AI+AG+ L A +++S ++ + H + + G Sbjct: 105 GVPSAQHLWGNNRAILAGDILFARASLLVASLGPEMVAH----------HARTFERLCEG 154 Query: 163 QMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 Q+ + +V F +Q + KTG+L+ A GA+++ A Q + + FGE +G+ Sbjct: 155 QLNETFGPTDGADRVDFYLQVLADKTGSLVSTAASFGALLSGAGQLMADVVSDFGEKVGV 214 Query: 220 IFQLADDLLD 229 FQ+ADD+LD Sbjct: 215 AFQIADDVLD 224 >gi|291287109|ref|YP_003503925.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM 12809] gi|290884269|gb|ADD67969.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM 12809] Length = 324 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 11/190 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A + + + + +E IH +L+HDD+ +D RRGK + + Sbjct: 43 GGKRLRPVFMILSALMCGYDGERTINLAGVVEYIHTATLLHDDV--IDGAKYRRGKESAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ G+ L + AF +KD + R+Q++L++ +G + Q++ Sbjct: 101 NVFGNDITVLCGDFLYSRAF------MNLVKDGDSRAQMLLAVAARTMSEGEVF-QLIKT 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D I I KT + CE GAI+ +++ L FG+ LGI FQ+ADD+ Sbjct: 154 ADVKITMDDYLRIINSKTAVMFATCCEIGAILGEMPVEKQKALADFGKTLGIAFQMADDI 213 Query: 228 LDCEEDLPKK 237 LD D P+K Sbjct: 214 LDYLGD-PEK 222 >gi|332982510|ref|YP_004463951.1| polyprenyl synthetase [Mahella australiensis 50-1 BON] gi|332700188|gb|AEE97129.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON] Length = 322 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 16/199 (8%) Query: 38 RLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 RLLS + + A GGK++R +V + + + AAIE +H +L+HDD+ + Sbjct: 31 RLLSDVINQLAGSGGKRLRPLMVILSSRFGGYKRDEIIHLAAAIEILHMATLVHDDI--I 88 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ IRRG+PTV ++ + A+ G+ L + F ++S + D + ++ + Sbjct: 89 DDAPIRRGEPTVQSRWGKDVAVFTGDFLFSTVFSLLSK-EVSFDD------LYEVSRVV- 140 Query: 156 LQGMLGGQMLDIQDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRC 212 + + G++ Q + V ++ + + KT L +C GA A S+ L Sbjct: 141 -KQICEGEVDQYQHRYNTAVSVRSYLRRIRHKTADLFALSCVIGAKRAGCSKPIYNALEN 199 Query: 213 FGENLGIIFQLADDLLDCE 231 FG + G++FQ+ DD+LD E Sbjct: 200 FGMDFGMVFQIIDDILDFE 218 >gi|330831008|ref|YP_004393960.1| trans-hexaprenyltranstransferase [Aeromonas veronii B565] gi|328806144|gb|AEB51343.1| Trans-hexaprenyltranstransferase [Aeromonas veronii B565] Length = 323 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPMLTVMAARALGYEGEDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F++++ N+R +LS N +G + Q+++ Sbjct: 101 AMFGNAASVLVGDYLYSRSFQMMAE-----LSNLRVMEILSDATNTIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++ H + ++ + +G+ LG FQ+ DD++ Sbjct: 155 DPDTTEESYMTVIYCKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDVM 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|302418638|ref|XP_003007150.1| decaprenyl-diphosphate synthase subunit 1 [Verticillium albo-atrum VaMs.102] gi|261354752|gb|EEY17180.1| decaprenyl-diphosphate synthase subunit 1 [Verticillium albo-atrum VaMs.102] Length = 451 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 24/176 (13%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+ DD+ +D+ RRG P+ ++++ A++AG+ LL A ++ Sbjct: 193 RLAEITELIHTSSLLRDDV--IDHSVSRRGSPSANLEFSNKMAVLAGDFLLGRASVALA- 249 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK----------M 183 +L+D +L+ ++ N ++ G+ + +++ DE Q+ + Sbjct: 250 ---RLRDAEVIELLATVIAN-----LVEGEFMQLKNTAQDERNPAWSQEAVDYYLRKTYL 301 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 KT +L+ +C + A++ +A E +G+NLG+ FQL DD+LD E+DL K Sbjct: 302 KTASLISKSCRASALLGNADAATVEAAYAYGKNLGLAFQLVDDMLDYTRSEKDLGK 357 >gi|313125957|ref|YP_004036227.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase [Halogeometricum borinquense DSM 11551] gi|312292322|gb|ADQ66782.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase [Halogeometricum borinquense DSM 11551] Length = 348 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 30/215 (13%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLT---------------ALRVGAAI 79 +RL A RY L GGK++R + A +L + L+ + +I Sbjct: 35 ERLYEATRYLLEAGGKRLRPTVTLLTAEALADAEPLSEDYRSFPALDGADIDVMAAAVSI 94 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E I ++LIH MD+ +RRG P VH +YD TAI+AG+ L AFE ++ + Sbjct: 95 EVIQSFTLIH--DDIMDDDDLRRGVPAVHKEYDTETAILAGDTLYAKAFEFMTQTGADPQ 152 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACE 194 + + + +L+ T + GQ LD+ EF T+V + ++KT L A Sbjct: 153 NGLEAVRLLATT----CTKICEGQALDV--EFERRTEVLPDEYLEMVELKTAVLYGAAAA 206 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + ++ A E L +G + G FQ+ DD+LD Sbjct: 207 TAGVLMGADDETVEALYRYGIDSGCAFQIQDDVLD 241 >gi|154494276|ref|ZP_02033596.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC 43184] gi|154085960|gb|EDN85005.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC 43184] Length = 324 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 14/205 (6%) Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86 A+ ++++ N RL SAI L GK +R LV A + +E +H + Sbjct: 23 AASLRSETN-RLQSAIDQILNASGKHVRPLLVLLTAKACGQVTDNTINSAVLLELLHTAT 81 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 LIHDD+ +D RRG P+++ +D +++ G+ +L+ A +I S +T N++ Sbjct: 82 LIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTA--LIRSIQT---GNLQ--- 131 Query: 147 MLSLTHNIGLQGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++ + N+G G Q+ ++ IDE+ + + KT L+ E G+I A AS Sbjct: 132 IIGIVSNLGRDLSEGEIKQLETAEESIIDESCYMQVIRKKTAMLLSACAEIGSISAGASG 191 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 E+ R FGE LG FQ+ DD+ D Sbjct: 192 EMVEKCREFGEYLGYCFQIKDDIFD 216 >gi|46138837|ref|XP_391109.1| hypothetical protein FG10933.1 [Gibberella zeae PH-1] Length = 444 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG P+ ++++ A++AG+ LL A ++ Sbjct: 186 RLAEIAELIHTASLLHDDV--IDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 242 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183 +L++ +L+ ++ N ++ G+ + +++ ++ +ET + +QK + Sbjct: 243 ---RLRNPEVVELLATVIAN-----LVEGEFMQLKNTERDERNPKWSEETVTYYLQKTYL 294 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ +C + A++ + + +G NLG+ FQL DDLLD Sbjct: 295 KTASLISKSCRAAALLGNTDAVTVDAAYSYGRNLGLAFQLVDDLLD 340 >gi|293375911|ref|ZP_06622172.1| polyprenyl synthetase [Turicibacter sanguinis PC909] gi|325838688|ref|ZP_08166603.1| polyprenyl synthetase [Turicibacter sp. HGF1] gi|292645433|gb|EFF63482.1| polyprenyl synthetase [Turicibacter sanguinis PC909] gi|325490738|gb|EGC93045.1| polyprenyl synthetase [Turicibacter sp. HGF1] Length = 318 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 105/221 (47%), Gaps = 27/221 (12%) Query: 20 LDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASLF-NVNHLTALRVG 76 +DLLL+ S T +D ++++ + ++ GGK+IR V A L NVN Sbjct: 14 FNDLLLKAVSSDSTLFSDPKMMNDLLQIIMNGGKRIRPLFVLLAADLKENVNKQEIYTAA 73 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--- 133 AIE +H SLIHDD+ +D R T+H QY + GN +L + E+ S Sbjct: 74 VAIELMHVASLIHDDI--IDESTTRHNVTTLHEQYSLTVGVHLGNFVLNKSLELFSEFKI 131 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQ-DEFIDETQVFMIQKMKTGAL 188 PK Q + + +N+ L G L Q D+ D++I+++ KTGAL Sbjct: 132 PKLH-------QEIAVVMNNLCL-GELNQQHNHFNFDLSFDDYINKSY------QKTGAL 177 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + G ++A N +L G +GI +QL DD+LD Sbjct: 178 ISLSLVVGGLVAGLDANIINQLSTIGSQIGIAYQLKDDILD 218 >gi|57833856|ref|NP_822197.2| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] gi|57546763|dbj|BAC68732.2| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] Length = 413 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 32/218 (14%) Query: 44 RYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 R+ L GGK+ RS + ALRVGAA+E I +L+HDD+ MD + Sbjct: 67 RFTLDGGKRTRSQFVWWAHRACGGPAAGAEAALRVGAALELIQTCALVHDDV--MDGSRL 124 Query: 101 RRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 RRG+P +H ++ E AI+AG+ L +A ++++ R Sbjct: 125 RRGRPALHTDVSAQYADAVLPAPGTRFGEAAAILAGDLALAWADDVVADTDLAPDPGRRV 184 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCF--ACESGAIM 199 + + S M+ GQ LDIQ + E + +K+ AL E GA + Sbjct: 185 REVWSCLR----MEMVAGQYLDIQGQATSSHSEARAMRAACLKS-ALYSVQRPLELGAAL 239 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 A A + L G +G+ FQL DDL D E+ P++ Sbjct: 240 AGADTATTQALCSAGRCVGLAFQLRDDLHDVFEE-PRR 276 >gi|58425655|gb|AAW74692.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 408 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 129 GGKRLRPMLVILAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 186 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L Q++ T+ I +L Q+L + Sbjct: 187 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 240 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + A +++L +G LG FQ+ADD+L Sbjct: 241 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGADAQVQQQLYDYGMQLGFAFQIADDVL 300 Query: 229 D 229 D Sbjct: 301 D 301 >gi|134101439|ref|YP_001107100.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291008114|ref|ZP_06566087.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133914062|emb|CAM04175.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 345 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 15/189 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR L + + A+ A+E +H +SL+HDD+ MD RR +PT Sbjct: 62 GKAIRPALALLASEAVGGSATAAVPAAVAVELVHNFSLLHDDV--MDGDRTRRHRPTAWT 119 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ LL+ A +++++ + ++ + LT + Q ++ GQ +DI Sbjct: 120 VFGIGNAVLVGDVLLSLACDVLAASEHPSA----TKAIRLLTDAV--QRLVAGQFVDIA- 172 Query: 170 EFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 F D V + + + KTGAL+ AC G I + + + R FGE +G+ FQ Sbjct: 173 -FQDRRAVQLDECVSMAENKTGALLGAACALGTIFGDGTAQQVDHQRAFGEGVGLAFQHV 231 Query: 225 DDLLDCEED 233 DDLL D Sbjct: 232 DDLLGIWGD 240 >gi|330465216|ref|YP_004402959.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] gi|328808187|gb|AEB42359.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] Length = 316 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 19/186 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + + +E H +L HDD+ MD +RRG P+ + Sbjct: 34 GGKRFRPLLVALGAQFGDPSRAEIVSAAVVVELTHLATLYHDDV--MDEAPVRRGAPSAN 91 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ AI+ G+ L A ++ + P+ ++++ L H GQ+ + Sbjct: 92 SRWTNSVAILVGDYLFARAADVAAELGPEAV---RLQARTFARLVH---------GQIAE 139 Query: 167 IQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + T + KTG+L+ + G + + A+ L +GE +G+ FQL Sbjct: 140 TVGPRAGDDPVTHYLRVIAEKTGSLIATSAHFGGLFSGATPEHVAALAGYGETIGVAFQL 199 Query: 224 ADDLLD 229 +DDLLD Sbjct: 200 SDDLLD 205 >gi|322418219|ref|YP_004197442.1| poluprenyl synthetase [Geobacter sp. M18] gi|320124606|gb|ADW12166.1| Polyprenyl synthetase [Geobacter sp. M18] Length = 322 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV A L + ++ + + +E IH +L+HDD+ +DN +RRG + + Sbjct: 41 GGKRIRPALVLLAARLCGYDGSRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F ++ + D +++ T I +L Q++ Sbjct: 99 TLWGNEASVLVGDFLFSKSFSLMVTDG----DLGILKVLADATTMIAEGEVL--QLVCTS 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I + + + KT L+ ACE GAI+ A ++ + +G +LGI FQL DD L Sbjct: 153 DLDITVERYIEVVRSKTAILLSAACEVGAILGGAEPGLRQAVADYGMDLGIAFQLMDDTL 212 Query: 229 D 229 D Sbjct: 213 D 213 >gi|91776572|ref|YP_546328.1| trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT] gi|91710559|gb|ABE50487.1| Trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT] Length = 322 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A F + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPTLVLLSAGAFGRIEAKHHELAAIIELIHTSTLLHDDV--VDESSLRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + + F+++ ++ +R +LS N +G + Q+L++ Sbjct: 101 TLFGNAASVLVGDFIYSRTFQMMVGIQS-----MRVMEVLSDATNTIAEGEVL-QLLNVH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I + + KT L A GAI+ ++ + +G LG FQL DD+L Sbjct: 155 DADITDEAYLRVIHYKTAKLFEAATRLGAIICGTDAQDEAAMAEYGMRLGTAFQLVDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DLSGD 219 >gi|2547044|dbj|BAA22867.1| solanesyl diphosphate synthase [Rhodobacter capsulatus] Length = 325 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 20/191 (10%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L N+ H A ++ A IE +H +L+HDD+ +D +RRG+P Sbjct: 46 GGKRMRPIMCLLAAYACGETNLKH--AQKLAAIIEMLHTATLVHDDV--VDESGLRRGRP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T + ++ TA++ G+ L+ AF+++ DN ++L + G + G++L Sbjct: 102 TANATWNNQTAVLVGDFLIARAFDLLVD-----LDN----MILLKDFSTGTCEIAEGEVL 152 Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 +Q + D T+ +Q + KT L A E AI+A + +E LR F + G FQ Sbjct: 153 QLQAQHQPDTTEDIYLQIIHGKTSRLFELATEGAAILAGKPEY-REPLRRFAGHFGNAFQ 211 Query: 223 LADDLLDCEED 233 + DD+LD D Sbjct: 212 IIDDILDYTSD 222 >gi|302898878|ref|XP_003047935.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256728867|gb|EEU42222.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 443 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 91/166 (54%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG P+ ++++ A++AG+ LL A ++ Sbjct: 185 RLAEITELIHTASLLHDDV--IDHSISRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 241 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183 +L++ +L+ ++ N ++ G+ + +++ ++ +ET + +QK + Sbjct: 242 ---RLRNPEVVELLATVIAN-----LVEGEFMQLKNTERDERNPKWSEETVSYYLQKTYL 293 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ +C + A++ ++ + +G NLG+ FQL DDLLD Sbjct: 294 KTASLISKSCRAAALLGNSDPVTVDAAYSYGRNLGLAFQLVDDLLD 339 >gi|254796624|ref|YP_003081460.1| polyprenyl synthetase family protein [Neorickettsia risticii str. Illinois] gi|254589861|gb|ACT69223.1| polyprenyl synthetase family protein [Neorickettsia risticii str. Illinois] Length = 302 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 28/231 (12%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + E + ++ +L D M T R + + L GK+IR+ L +L Sbjct: 9 LNASFSEKLRSVEEVLYD-------SMATFTKLRSIEDAKKMLSSGKRIRALLSLLSFAL 61 Query: 65 F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 N + +R A IE IH +L+HDD+ +D IRRGKP + + +++ G+ L Sbjct: 62 CENSDTDVEIRAAATIELIHNATLMHDDV--VDENSIRRGKPNIKSIHGNRISVLTGDFL 119 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 L+ AFEII +N+ L+LS T + + G+ML +Q E + E++ + Sbjct: 120 LSVAFEIILEC-----ENLSVVLLLSKTA----KQLSEGEMLQLQSIGEIVSESEYLEVI 170 Query: 182 KMKTGALMCFACESGAIMAHASQNEKER---LRCFGENLGIIFQLADDLLD 229 KT L A E AI+ +KE LR G +G+ FQ+ DD+LD Sbjct: 171 ARKTAVLFSAAAEIAAILT----GKKEYVVILREIGFLIGMAFQIIDDVLD 217 >gi|167947660|ref|ZP_02534734.1| farnesyl-diphosphate synthase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 111 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 43/76 (56%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GK+IR L V A+E IH YSL+HDDLP+MD+ +RRG+PT Sbjct: 36 LAAGKRIRPILTYATGQALGVEINQLDTAACAVEMIHAYSLVHDDLPAMDDDELRRGRPT 95 Query: 107 VHIQYDEVTAIIAGNG 122 H YDE TAI+ G+ Sbjct: 96 CHKAYDEATAILVGDA 111 >gi|332308087|ref|YP_004435938.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175416|gb|AEE24670.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 323 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A N+ + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLTVLAARALNIQTEQHHTLAAIIEFIHTATLLHDDV--VDESTMRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ + D++R +LS N+ +G + Q+++ Sbjct: 101 EVFGNQASVLVGDFLYTRSFQMMVT-----LDSMRVMQILSDATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++ S+ + ++ +G+ LG FQL DD++ Sbjct: 155 DPNTTEESYMEVIYSKTARLFEAATLLAAVLTKQSEAIENAMQDYGKYLGTAFQLVDDIM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYASD 219 >gi|30699332|ref|NP_177972.2| SPS1 (solanesyl diphosphate synthase 1); trans-octaprenyltranstransferase [Arabidopsis thaliana] gi|19911233|dbj|BAB86941.1| solanesyl diphosphate synthase [Arabidopsis thaliana] gi|57999783|dbj|BAD88533.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana] gi|98960969|gb|ABF58968.1| At1g78510 [Arabidopsis thaliana] gi|332197993|gb|AEE36114.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana] Length = 406 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L + LT R+ IE IH SLIHDD+ +D +RR Sbjct: 124 GGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRR 181 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TVH + A++AG+ + A ++ N+ + ++ L + ++ G Sbjct: 182 GKETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 232 Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F +T++ ++++ KT +L+ + + AI + + E++ FG+NLG+ Sbjct: 233 EIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGL 292 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 293 SFQIVDDILD 302 >gi|158317462|ref|YP_001509970.1| polyprenyl synthetase [Frankia sp. EAN1pec] gi|158112867|gb|ABW15064.1| Polyprenyl synthetase [Frankia sp. EAN1pec] Length = 338 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A L A+E +H +SL+HDDL MD RR + T Sbjct: 53 GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDRERRHRATAW 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+AG+ LL A +++ + + + R+ ++L G+Q ++ GQ D+ Sbjct: 111 TVFGADGAILAGDALLGLATQVLL--EVEGEPGRRAAVIL----GAGVQDLVRGQAEDLL 164 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ + GA++A A + L +G LG FQL D Sbjct: 165 FESRSDVSVAETLHMEDGKTGALLACSASLGAVLAGAPDEVVDGLAEYGSRLGTAFQLID 224 Query: 226 DLL 228 DLL Sbjct: 225 DLL 227 >gi|302831696|ref|XP_002947413.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f. nagariensis] gi|300267277|gb|EFJ51461.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f. nagariensis] Length = 389 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 26/193 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAA------------IECIHCYSLIHDDLPSMD 96 GGKK+R +V F V H TA R G E IH SL+HDD+ +D Sbjct: 107 GGKKLRPVIV------FLVAHSTAQREGLTELTDKHRRLAEITEMIHTASLVHDDV--LD 158 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 IRRGK T++ Y A++AG+ L + +++ DN+ ++S Sbjct: 159 ECDIRRGKKTINSMYGTRVAVLAGDFLFAQSSWFLAN-----LDNLEVIKLISQVIADFA 213 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 G + Q + D I Q KT +L+ +C S A+ + + KE + +G++ Sbjct: 214 NGEIS-QAASLFDTDITLEQYLDKSFYKTASLIAASCRSAAVFSDSPVEVKEAMYSYGKH 272 Query: 217 LGIIFQLADDLLD 229 LG+ FQ+ DD+LD Sbjct: 273 LGLAFQVVDDVLD 285 >gi|294496201|ref|YP_003542694.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Methanohalophilus mahii DSM 5219] gi|292667200|gb|ADE37049.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Methanohalophilus mahii DSM 5219] Length = 321 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 13/220 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA 72 K+ T++D+ + + + H + L A RY GGK++R ++ A + + Sbjct: 8 KKRSTLVDESIQE---FLPIDHPEELYRATRYLPDAGGKRLRPAVLMLSAEAVGGDSDSV 64 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L A+E IH ++LIH MD IRRG P +H+++ AI+AG+ L + AFEIIS Sbjct: 65 LPAAVALELIHNFTLIH--DDIMDRDDIRRGMPALHVKWGTAGAILAGDTLYSRAFEIIS 122 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALM 189 + ++ +LS T + GQ LD+ + + +D + + + KT L Sbjct: 123 KMDADPQKLLKCVALLSRT----CTKICEGQWLDVDFEKRDIVDVDEYLEMIENKTSVLY 178 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + GAI+ AS + + FG GI FQ+ DD++D Sbjct: 179 GAAAKVGAILGGASDEVADAMYEFGRLTGISFQIHDDVID 218 >gi|299820943|ref|ZP_07052832.1| heptaprenyl diphosphate synthase [Listeria grayi DSM 20601] gi|299817964|gb|EFI85199.1| heptaprenyl diphosphate synthase [Listeria grayi DSM 20601] Length = 326 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 24/190 (12%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK +R L + +NV+ ++ V +A+E +H +LIHDD+ +D+ +RRG P Sbjct: 46 GGKLLRPAFVLLTAQAGPEYNVDR--SIAVASALEVLHMATLIHDDV--IDDADMRRGVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD------NIRSQLMLSLTHNIGLQGM 159 T+H ++ A+ G+ L F+I+S+ +++ NI LM L Sbjct: 102 TIHSKFGRKYAVYTGDYLFCVCFKILSAHADSVENIDFNSKNIEKILMGEL--------- 152 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 QM D+ + KT L +C SGA+ + A + + G +G+ Sbjct: 153 --NQMKDLYHMNVTVKDYLTRISGKTAQLFALSCYSGAVSSKAPRKTLYTAKNAGHFIGM 210 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 211 AFQIIDDILD 220 >gi|114570734|ref|YP_757414.1| trans-hexaprenyltranstransferase [Maricaulis maris MCS10] gi|114341196|gb|ABI66476.1| Trans-hexaprenyltranstransferase [Maricaulis maris MCS10] Length = 340 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A++ + + L++ AA+E IH +L+HDD+ +D +RRGK + Sbjct: 59 GGKRVRPMITVAAANMIGHSDIAPLKLAAAVEFIHTATLLHDDV--VDESGMRRGKAAAN 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + ++++ G+ L +F ++ + +R+ +LS + +G + Q+ ++ Sbjct: 117 LVWGNASSVLVGDFLFARSFSLMVEAGS-----MRALGVLSDAASTIAEGEVR-QLSAVK 170 Query: 169 DEFID-ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D + ET + +I A SG I+A NE+ L +G LG+ FQL DD Sbjct: 171 DVGVSVETYMQIIDAKTAALFAAAAQVSG-IVADRPANEETALETYGRELGLAFQLVDDA 229 Query: 228 LD 229 LD Sbjct: 230 LD 231 >gi|15823920|dbj|BAB69143.1| geranylgeranyl pyrophosphase synthase [Streptomyces avermitilis] Length = 379 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 32/218 (14%) Query: 44 RYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 R+ L GGK+ RS + ALRVGAA+E I +L+HDD+ MD + Sbjct: 33 RFTLDGGKRTRSQFVWWAHRACGGPAAGAEAALRVGAALELIQTCALVHDDV--MDGSRL 90 Query: 101 RRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 RRG+P +H ++ E AI+AG+ L +A ++++ R Sbjct: 91 RRGRPALHTDVSAQYADAVLPAPGTRFGEAAAILAGDLALAWADDVVADTDLAPDPGRRV 150 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCF--ACESGAIM 199 + + S M+ GQ LDIQ + E + +K+ AL E GA + Sbjct: 151 REVWSCLR----MEMVAGQYLDIQGQATSSHSEARAMRAACLKS-ALYSVQRPLELGAAL 205 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 A A + L G +G+ FQL DDL D E+ P++ Sbjct: 206 AGADTATTQALCSAGRCVGLAFQLRDDLHDVFEE-PRR 242 >gi|331004838|ref|ZP_08328256.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989] gi|330421369|gb|EGG95617.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989] Length = 321 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 85/155 (54%), Gaps = 8/155 (5%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A IE IH +L+HDD+ M + +RRG+ T + ++ +++ G+ L + AF+++ + Sbjct: 68 LAAIIEFIHSATLLHDDVVDMSD--LRRGRLTANAKWGNAPSVLVGDFLYSRAFQMMVAV 125 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 ++ +LS T N+ +G + Q+++ + I E F + KT L ACE Sbjct: 126 G-----DMSIMKILSDTTNLISEGEVQ-QLINAKKPDISEKGYFEVIHKKTAILFEAACE 179 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A ++ A + + +L +G ++GI FQL DD LD Sbjct: 180 TAATLSGAEETLRRQLTAYGYHVGIAFQLIDDALD 214 >gi|212544820|ref|XP_002152564.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Penicillium marneffei ATCC 18224] gi|210065533|gb|EEA19627.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Penicillium marneffei ATCC 18224] Length = 459 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + + Q+ A++AG+ LL A ++ Sbjct: 201 RLAEITELIHTASLLHDDV--IDNAVTRRSSNSANTQFGNKMAVLAGDFLLGRASVALA- 257 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE----FIDETQVFMIQK--M 183 +L++ +L+ ++ N ++ G+ + ++ DE F D+T + +QK + Sbjct: 258 ---RLRNPEVIELLATVIAN-----LVEGEFMQLKNTASDERSPVFTDDTIAYYLQKTYL 309 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ +C + A++ +++ E +G NLG+ FQL DD+LD Sbjct: 310 KTASLISKSCRATALLGNSTPEIVEAAYSYGRNLGLAFQLVDDMLD 355 >gi|12862621|dbj|BAB32549.1| putative GGPP synthase 1 [Euphorbia tirucalli] gi|14041811|dbj|BAB55456.1| putative GGPPsynthase [Euphorbia tirucalli] Length = 127 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 3/127 (2%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT HI Y E A++AG+ LL +AFE I+ + + + L IG Sbjct: 1 NDDLRRGKPTNHIVYGEDVAVLAGDALLAFAFEHIAVSTLNVSPARIVRAIGELAKAIGA 60 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E + E ++ I KT L+ A GAI+ + + E+LR + Sbjct: 61 EGLVAGQVVDISSEGLSEVDLERLEFIHIHKTAKLLEGAVVLGAILGGGTDEQVEKLRKY 120 Query: 214 GENLGII 220 +G++ Sbjct: 121 ARGIGLL 127 >gi|88813013|ref|ZP_01128256.1| Trans-hexaprenyltranstransferase [Nitrococcus mobilis Nb-231] gi|88789791|gb|EAR20915.1| Trans-hexaprenyltranstransferase [Nitrococcus mobilis Nb-231] Length = 253 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V A + + + A +E IH +L+HDD+ +D +RRG+ T Sbjct: 43 GGKRLRPLVVLLAARACSCRDHQHILLAAIVEMIHTATLLHDDV--VDESDMRRGRETAR 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AFE++ +L+ + T+ I +L Q+L+I Sbjct: 101 QIWGNGASVLVGDFLYTRAFEMM----VELQQTAVMGIFSRATNTIAEGEVL--QLLNIH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + KT AL C A++ S ++ + +G +LG FQL DD L Sbjct: 155 DPDVTEERYREVIFRKTAALFEAGCRLAALLGARSVQDQAAMAAYGRHLGTAFQLIDDAL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|310799250|gb|EFQ34143.1| polyprenyl synthetase [Glomerella graminicola M1.001] Length = 455 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 89/166 (53%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG P+ ++++ A++AG+ LL A ++ Sbjct: 197 RLAEITELIHTASLLHDDV--IDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 253 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--------VFMIQK--M 183 +L++ +L+ ++ N ++ G+ + +++ DE + + +QK + Sbjct: 254 ---RLRNAEVIELLATVIAN-----LVEGEFMQLKNTERDERRPVWSEDALAYYLQKTYL 305 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ +C + AI+ + E +G+NLG+ FQL DD+LD Sbjct: 306 KTASLISKSCRASAILGGSDAASVEAAYAYGKNLGLAFQLVDDMLD 351 >gi|110739325|dbj|BAF01575.1| polyprenyl diphosphate synthase [Arabidopsis thaliana] Length = 406 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L + LT R+ IE IH SLIHDD+ +D +RR Sbjct: 124 GGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRR 181 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TVH + A++AG+ + A ++ N+ + ++ L + ++ G Sbjct: 182 GKETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 232 Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F +T++ ++++ KT +L+ + + AI + + E++ FG+NLG+ Sbjct: 233 EIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGL 292 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 293 SFQIVDDILD 302 >gi|187930136|ref|YP_001900623.1| Polyprenyl synthetase [Ralstonia pickettii 12J] gi|187727026|gb|ACD28191.1| Polyprenyl synthetase [Ralstonia pickettii 12J] Length = 325 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 46 GGKRLRPVILLLVANALGYKGEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTAN 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ +++R +L+ NI +G + Q+L++ Sbjct: 104 AVFGNAASVLVGDFLYSRAFQMMVQA-----NSMRIMQILADATNIISEGEVL-QLLNMH 157 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + + KT L A + GA+++ A +E +G +G FQ+ DDLL Sbjct: 158 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSDADAATEEAAAEYGRRIGTAFQIVDDLL 217 Query: 229 D 229 D Sbjct: 218 D 218 >gi|16801851|ref|NP_472119.1| hypothetical protein lin2790 [Listeria innocua Clip11262] gi|16415326|emb|CAC98016.1| lin2790 [Listeria innocua Clip11262] Length = 326 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 97/185 (52%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPEFDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI ++ ++ +L G++ + Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155 Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + +D T + ++ KT L +C SGA + A + + G LG+ FQ+ Sbjct: 156 RTSYKMDVTVREYLSRISGKTAQLFALSCYSGATGSKAPRMTVAKCYNIGHYLGMAFQII 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|305664558|ref|YP_003860845.1| polyprenyl synthetase [Maribacter sp. HTCC2170] gi|88708575|gb|EAR00811.1| polyprenyl synthetase [Maribacter sp. HTCC2170] Length = 325 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 94/211 (44%), Gaps = 38/211 (18%) Query: 39 LLSAIRYALLG--GKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLP 93 LL+ I Y ++ GK++R V A L N VN T R + IE IH SL+HDD+ Sbjct: 32 LLNRITYYIVNRKGKQMRPMFVFLTAKLLNNGEVNERT-YRGASIIELIHTASLVHDDV- 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH- 152 +D RRG +++ + A++ G+ L + L+LSL + Sbjct: 90 -VDESNKRRGFFSINALWKNKIAVLVGDYLFSKG------------------LLLSLDNG 130 Query: 153 --------NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAH 201 ++ ++ M G++L I+ IDE + I + KT L+ C GA Sbjct: 131 DFDLLRIISVAVREMSEGELLQIEKARRLDIDEEIYYDIIRQKTATLIAACCSMGACSVK 190 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 E E R FGE G+ FQ+ DDL D E Sbjct: 191 PESEEVETFRKFGEFCGMAFQIKDDLFDYGE 221 >gi|313622186|gb|EFR92727.1| polyprenyl synthetase [Listeria innocua FSL J1-023] Length = 326 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 97/185 (52%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPEFDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI ++ ++ +L G++ + Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155 Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + +D T + ++ KT L +C SGA + A + + G LG+ FQ+ Sbjct: 156 RTSYKMDVTVREYLSRISGKTAQLFALSCYSGATGSKAPRMTVAKCYNIGHYLGMAFQII 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|322709158|gb|EFZ00734.1| decaprenyl-diphosphate synthase subunit 1 [Metarhizium anisopliae ARSEF 23] Length = 420 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG P+ ++++ A++AG+ LL A ++ Sbjct: 162 RLAEITELIHTASLLHDDV--IDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 218 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183 +L+ +L+ ++ N ++ G+ + +++ ++ +ET + +QK + Sbjct: 219 ---RLRHVEVVELLATVIAN-----LVEGEFMQLKNTERDERSPKYSEETLSYYLQKTYL 270 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ +C + A++ +A + +G NLG+ FQL DD+LD Sbjct: 271 KTASLISKSCRAAALLGNADATTVDAAYSYGRNLGLAFQLVDDMLD 316 >gi|229084617|ref|ZP_04216886.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-44] gi|228698693|gb|EEL51409.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus Rock3-44] Length = 320 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 17/194 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V + T V A+E IH SL+HDD+ +D +RR TV+ Sbjct: 43 GGKRIRPVFVLLAGKFGDYKLETIKHVAVALELIHMASLVHDDV--IDAALLRRNSATVN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ + A+ G+ L + E I++ + S +L + G++ I+ Sbjct: 101 AKWGDRIAMYTGDYLFAKSLECITNLEVPEAHQALSYTILEVCK---------GEIEQIK 151 Query: 169 DEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D++ + ++ + K KT L+ +C+ GAI + AS++ RL +G +G+ +Q+ D Sbjct: 152 DKYNYNQNLRTYLRRIKRKTALLIAASCQLGAIASGASRDTVNRLFWYGYFVGMSYQIID 211 Query: 226 DLLD---CEEDLPK 236 D+LD EE L K Sbjct: 212 DILDFVSTEEKLGK 225 >gi|229821695|ref|YP_002883221.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333] gi|229567608|gb|ACQ81459.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333] Length = 334 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 23/192 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + L A+E H +L HDD+ MD+ RRG P+ H Sbjct: 50 GGKRMRPALALLTAQLGSGTSDAVLEAAVAVELTHLATLYHDDV--MDSAPTRRGAPSAH 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-------MLSLTHNIGLQGMLG 161 + AI+ G+ L A ++S D +R Q + L IG Q Sbjct: 108 EVWGNSVAILTGDLLFARASRLVSELG---PDAVRVQAETFERLCLGQLHETIGPQD--- 161 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 G+ D + ++D + KTG+L+ + + GA+ + + + +GE +G+ F Sbjct: 162 GE--DAVEHYLD------VLAGKTGSLIAASAQYGAMFSGVGADALGTVVRYGEKVGVAF 213 Query: 222 QLADDLLDCEED 233 QLADD++D D Sbjct: 214 QLADDVIDLLSD 225 >gi|170725365|ref|YP_001759391.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908] gi|169810712|gb|ACA85296.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908] Length = 323 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + N L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPLLSILAARAVDYNGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L +++ T+ + +L Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELGSMEVLEVLADATNVLAEGEVL--QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A + + + L +G+ LG FQL DDLL Sbjct: 155 DPNTTEESYMRVIYCKTAKLFEAATRLAGVLADSPKEIQVALADYGKYLGTAFQLTDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTAD 219 >gi|117926629|ref|YP_867246.1| trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1] gi|117610385|gb|ABK45840.1| Trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1] Length = 331 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LTALRVGAAIECI 82 L + + TQ D LL++ GGK++R L A LF + AL + A +E I Sbjct: 31 LNSPVELITQVGDHLLNS------GGKRLRPILTLVTAKLFGYQKADVHAL-LAAVVEFI 83 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H +L+HDD+ +D RRG+ T + + I+ G+ L + +F+I+ ++ Sbjct: 84 HTATLLHDDV--VDKSNTRRGQATANSVWGNKAPILVGDFLFSRSFQIMVE-----HGDL 136 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202 R ++S I +G + Q++ D DE + + + KT +L A + GA++A Sbjct: 137 RVLRIVSDCCAIISEGEVM-QLVASNDLATDEERYLDVIRHKTASLFASASQLGAVVADQ 195 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S +R+ +G LG +Q+ DDLLD + K Sbjct: 196 SDEIAQRMYDYGMMLGTAYQVVDDLLDYSAETEK 229 >gi|322693011|gb|EFY84889.1| decaprenyl-diphosphate synthase subunit 1 [Metarhizium acridum CQMa 102] Length = 449 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG P+ ++++ A++AG+ LL A ++ Sbjct: 191 RLAEITELIHTASLLHDDV--IDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 247 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183 +L+ +L+ ++ N ++ G+ + +++ ++ +ET + +QK + Sbjct: 248 ---RLRHVEVVELLATVIAN-----LVEGEFMQLKNTERDERSPKYSEETLSYYLQKTYL 299 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ +C + A++ +A + +G NLG+ FQL DD+LD Sbjct: 300 KTASLISKSCRAAALLGNADATTVDAAYSYGRNLGLAFQLVDDMLD 345 >gi|295113304|emb|CBL31941.1| Geranylgeranyl pyrophosphate synthase [Enterococcus sp. 7L76] gi|315161451|gb|EFU05468.1| polyprenyl synthetase [Enterococcus faecalis TX0645] Length = 326 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + T++ D + + A GGK +R FL + L++ A++E +H +L Sbjct: 26 LHTRNEDIEEALVSLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D+ +RRG T+ QY + A+ G+ L T F +I+ D + Sbjct: 86 IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204 + + G++ +L G++ + F + + KT L +C GA H+S+ Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + G ++GI FQ+ DD+LD D Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224 >gi|91794278|ref|YP_563929.1| trans-hexaprenyltranstransferase [Shewanella denitrificans OS217] gi|91716280|gb|ABE56206.1| Trans-hexaprenyltranstransferase [Shewanella denitrificans OS217] Length = 323 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L L++ A +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLTVLACRAMGYEGDKHLKLAAIVEFIHTASLLHDDV--VDESLLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L D++ +L+ T N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSLHVLKVLANTTNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A AS E+ L +G+ LG FQL DDLL Sbjct: 155 DPNTTEANYMRVIYCKTAKLFEAATLLAGVLAGASVAEQIALGEYGKFLGTAFQLTDDLL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|127511802|ref|YP_001092999.1| trans-hexaprenyltranstransferase [Shewanella loihica PV-4] gi|126637097|gb|ABO22740.1| Trans-hexaprenyltranstransferase [Shewanella loihica PV-4] Length = 323 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L++ A +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPLLSILAARAIAYEGEAHLKLAAIVEFIHTASLLHDDV--VDESMLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+LK +++ T+ + +L Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELKSMEVLEVLADATNVLAEGEVL--QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A +S + L +G+ LG FQL DDLL Sbjct: 155 DPDTSEESYMRVIYCKTAKLFEAATRLAGVLAESSIEVQTALADYGKYLGTAFQLTDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTAD 219 >gi|24375152|ref|NP_719195.1| octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1] gi|24349926|gb|AAN56639.1|AE015800_12 octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1] Length = 323 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L D++R +L+ T N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSMRVLRVLADTTNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++A AS ++ L +G+ LG FQL DDLL Sbjct: 155 DPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASPEQETALGDYGKYLGTAFQLTDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTAD 219 >gi|289664594|ref|ZP_06486175.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667160|ref|ZP_06488235.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 332 Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + A+ +++L +G LG FQ+ADD+L Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGATVEVQQQLYDYGMQLGFAFQIADDVL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|309783042|ref|ZP_07677761.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA] gi|308918150|gb|EFP63828.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA] Length = 325 Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 46 GGKRLRPVILLLVANALGYKGEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTAN 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ +++R +L+ NI +G + Q+L++ Sbjct: 104 AVFGNAASVLVGDFLYSRAFQMMVQ-----ANSMRIMQILADATNIISEGEVL-QLLNMH 157 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + + KT L A + GA+++ A +E +G +G FQ+ DDLL Sbjct: 158 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEEAAAEYGRRIGTAFQIVDDLL 217 Query: 229 D 229 D Sbjct: 218 D 218 >gi|182437084|ref|YP_001824803.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465600|dbj|BAG20120.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 356 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 15/184 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A +V + E IH SL HDD+ MD +R G +V+ Sbjct: 76 GGKRLRPLLTLLGAEFGDVRGEGVIEAAVVAELIHTASLHHDDV--MDEALLRHGVSSVN 133 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A+ +GN LL A + +S + I Q S + ++ GQ+ ++ Sbjct: 134 ARWGNTVAVRSGNWLLARAARLSAS---LAPEAIPLQAEAS-------ERLVRGQLRELV 183 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E ++ F + K+ +L+ + GA+ A A E L +GE+LG+ FQ++D Sbjct: 184 GPDGAERRLSHYFAVISDKSASLISLSLRLGAVQAGAPAGVGEALAAYGEHLGVAFQISD 243 Query: 226 DLLD 229 DLLD Sbjct: 244 DLLD 247 >gi|256853573|ref|ZP_05558938.1| polyprenyl synthetase [Enterococcus faecalis T8] gi|256710516|gb|EEU25559.1| polyprenyl synthetase [Enterococcus faecalis T8] gi|315028578|gb|EFT40510.1| polyprenyl synthetase [Enterococcus faecalis TX4000] Length = 326 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + T++ D + + A GGK +R FL + L++ A++E +H +L Sbjct: 26 LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D+ +RRG T+ QY + A+ G+ L T F +I+ D + Sbjct: 86 IHDDI--IDDSPLRRGTVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204 + + G++ +L G++ + F + + KT L +C GA H+S+ Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + G ++GI FQ+ DD+LD D Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224 >gi|84622979|ref|YP_450351.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|122879101|ref|YP_200077.6| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] gi|188577962|ref|YP_001914891.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|84366919|dbj|BAE68077.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522414|gb|ACD60359.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 332 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPMLVILAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + A +++L +G LG FQ+ADD+L Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGADAQVQQQLYDYGMQLGFAFQIADDVL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|90411954|ref|ZP_01219962.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum 3TCK] gi|90327212|gb|EAS43584.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum 3TCK] Length = 323 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 14/188 (7%) Query: 49 GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R LV A H+TA A +E IH +L+HDD+ +D +RRGK Sbjct: 43 GGKRLRPMLVVLAARALGYQGDKHITA---AAFVEFIHTATLLHDDV--VDESDMRRGKE 97 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T + + +++ G+ + T +F++++S ++ ++ ++S N+ +G + Q++ Sbjct: 98 TANAAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDVMSEATNVIAEGEVL-QLM 151 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D E + KT L A + AI+ +S + L+ +G LG FQL D Sbjct: 152 NCNDPNTTEDNYMQVIYSKTARLFEAATQISAIITESSTEVEVALQDYGRYLGTAFQLID 211 Query: 226 DLLDCEED 233 D+LD D Sbjct: 212 DVLDYVAD 219 >gi|256820910|ref|YP_003142189.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271] gi|256582493|gb|ACU93628.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271] Length = 326 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 21/204 (10%) Query: 39 LLSAIRYALLG--GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 LL+ I Y ++ GK++R FLV + S V+ T R + IE IH +L+HDD+ Sbjct: 32 LLNRITYYIVNRKGKQMRPMFVFLVAKMVSGGKVSERT-YRGASVIELIHTATLVHDDV- 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +D+ RRG +++ + A++ G+ LL+ ++S DN L+ ++ Sbjct: 90 -VDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLRIIS-- 139 Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KER 209 + ++ M G++L I+ I E + I + KT L+ C GA Q E E+ Sbjct: 140 VAVREMSEGELLQIEKARRLDIVEEVYYEIIRQKTATLIAACCAMGACSVQPEQTELIEK 199 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 +R FGE +G+ FQ+ DDL D ED Sbjct: 200 MRLFGEYIGMAFQIKDDLFDYTED 223 >gi|220913570|ref|YP_002488879.1| polyprenyl synthetase [Arthrobacter chlorophenolicus A6] gi|219860448|gb|ACL40790.1| Polyprenyl synthetase [Arthrobacter chlorophenolicus A6] Length = 366 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 17/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L CA L + + ++ +E H +L HDD+ MD+ RRG PT H Sbjct: 84 GGKRIRPLLTLLCAHLGDASLPAVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAH 141 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + A++ G+ + A ++S L R+ L L GQ+ + Sbjct: 142 EVWGNSVAVLTGDLIFARASILVSELGGRALGIQARTFERLCL-----------GQLHET 190 Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 DE + + KTG+L+ + + GAI + A + ++ L +GE +G+ FQLA Sbjct: 191 VGPRPDEDPIEHYLSVIADKTGSLVAASGQFGAIFSGADEAYEDVLVEYGEKVGVAFQLA 250 Query: 225 DDLLDC 230 DD++D Sbjct: 251 DDVIDV 256 >gi|325479330|gb|EGC82426.1| putative geranyltranstransferase [Anaerococcus prevotii ACS-065-V-Col13] Length = 274 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 38 RLLSAIRYALLGGKKIRS--FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 ++ A+ Y++ GK++R+ FL T SL ++ L AIE I YSL+HDDLP+M Sbjct: 29 KIEEAMLYSMEDGKRVRATLFLETRKLSLKEISKNDFL-FALAIEMIQAYSLVHDDLPAM 87 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ RRGK +VH + E I+ G+ LL A +II + L D + L +G Sbjct: 88 DDDDYRRGKESVHKHFGEDLGILTGDALLNEASKII--MEVSLNDPSYLSAGVYLLEKVG 145 Query: 156 LQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 L GM+ GQ+LD++ D+ + + KT + ++ S E L + Sbjct: 146 LSGMIEGQILDLRRRNNYDKDFLIEVYDKKTADFFKACTVAAGLVNGFSDQEIMSLENYA 205 Query: 215 ENLGIIFQLADDLLDCEED 233 LG+ FQL DDLL EED Sbjct: 206 YYLGLGFQLQDDLL--EED 222 >gi|29376566|ref|NP_815720.1| heptaprenyl diphosphate synthase, component II, putative [Enterococcus faecalis V583] gi|227520176|ref|ZP_03950225.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX0104] gi|227555390|ref|ZP_03985437.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis HH22] gi|229545358|ref|ZP_04434083.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX1322] gi|255975461|ref|ZP_05426047.1| polyprenyl synthetase [Enterococcus faecalis T2] gi|256619530|ref|ZP_05476376.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200] gi|256762928|ref|ZP_05503508.1| polyprenyl synthetase [Enterococcus faecalis T3] gi|256962662|ref|ZP_05566833.1| polyprenyl synthetase [Enterococcus faecalis HIP11704] gi|257082182|ref|ZP_05576543.1| polyprenyl synthetase [Enterococcus faecalis E1Sol] gi|257084800|ref|ZP_05579161.1| polyprenyl synthetase [Enterococcus faecalis Fly1] gi|257090333|ref|ZP_05584694.1| polyprenyl synthetase [Enterococcus faecalis CH188] gi|257419680|ref|ZP_05596674.1| polyprenyl synthetase [Enterococcus faecalis T11] gi|257422162|ref|ZP_05599152.1| polyprenyl synthetase [Enterococcus faecalis X98] gi|307272749|ref|ZP_07553996.1| polyprenyl synthetase [Enterococcus faecalis TX0855] gi|307275992|ref|ZP_07557125.1| polyprenyl synthetase [Enterococcus faecalis TX2134] gi|307277723|ref|ZP_07558809.1| polyprenyl synthetase [Enterococcus faecalis TX0860] gi|307287854|ref|ZP_07567887.1| polyprenyl synthetase [Enterococcus faecalis TX0109] gi|307295826|ref|ZP_07575658.1| polyprenyl synthetase [Enterococcus faecalis TX0411] gi|312900854|ref|ZP_07760148.1| polyprenyl synthetase [Enterococcus faecalis TX0470] gi|312902835|ref|ZP_07762039.1| polyprenyl synthetase [Enterococcus faecalis TX0635] gi|29344030|gb|AAO81790.1| heptaprenyl diphosphate synthase, component II, putative [Enterococcus faecalis V583] gi|227072348|gb|EEI10311.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX0104] gi|227175504|gb|EEI56476.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis HH22] gi|229309565|gb|EEN75552.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX1322] gi|255968333|gb|EET98955.1| polyprenyl synthetase [Enterococcus faecalis T2] gi|256599057|gb|EEU18233.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200] gi|256684179|gb|EEU23874.1| polyprenyl synthetase [Enterococcus faecalis T3] gi|256953158|gb|EEU69790.1| polyprenyl synthetase [Enterococcus faecalis HIP11704] gi|256990212|gb|EEU77514.1| polyprenyl synthetase [Enterococcus faecalis E1Sol] gi|256992830|gb|EEU80132.1| polyprenyl synthetase [Enterococcus faecalis Fly1] gi|256999145|gb|EEU85665.1| polyprenyl synthetase [Enterococcus faecalis CH188] gi|257161508|gb|EEU91468.1| polyprenyl synthetase [Enterococcus faecalis T11] gi|257163986|gb|EEU93946.1| polyprenyl synthetase [Enterococcus faecalis X98] gi|306496157|gb|EFM65736.1| polyprenyl synthetase [Enterococcus faecalis TX0411] gi|306500999|gb|EFM70306.1| polyprenyl synthetase [Enterococcus faecalis TX0109] gi|306505602|gb|EFM74786.1| polyprenyl synthetase [Enterococcus faecalis TX0860] gi|306507322|gb|EFM76459.1| polyprenyl synthetase [Enterococcus faecalis TX2134] gi|306510363|gb|EFM79386.1| polyprenyl synthetase [Enterococcus faecalis TX0855] gi|310633889|gb|EFQ17172.1| polyprenyl synthetase [Enterococcus faecalis TX0635] gi|311291953|gb|EFQ70509.1| polyprenyl synthetase [Enterococcus faecalis TX0470] gi|315031036|gb|EFT42968.1| polyprenyl synthetase [Enterococcus faecalis TX0017] gi|315149250|gb|EFT93266.1| polyprenyl synthetase [Enterococcus faecalis TX0012] gi|315157199|gb|EFU01216.1| polyprenyl synthetase [Enterococcus faecalis TX0043] gi|315164740|gb|EFU08757.1| polyprenyl synthetase [Enterococcus faecalis TX1302] gi|315167570|gb|EFU11587.1| polyprenyl synthetase [Enterococcus faecalis TX1341] gi|315171630|gb|EFU15647.1| polyprenyl synthetase [Enterococcus faecalis TX1342] gi|315173215|gb|EFU17232.1| polyprenyl synthetase [Enterococcus faecalis TX1346] gi|315575049|gb|EFU87240.1| polyprenyl synthetase [Enterococcus faecalis TX0309B] gi|315576766|gb|EFU88957.1| polyprenyl synthetase [Enterococcus faecalis TX0630] gi|315582475|gb|EFU94666.1| polyprenyl synthetase [Enterococcus faecalis TX0309A] Length = 326 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + T++ D + + A GGK +R FL + L++ A++E +H +L Sbjct: 26 LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D+ +RRG T+ QY + A+ G+ L T F +I+ D + Sbjct: 86 IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204 + + G++ +L G++ + F + + KT L +C GA H+S+ Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + G ++GI FQ+ DD+LD D Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224 >gi|315146167|gb|EFT90183.1| polyprenyl synthetase [Enterococcus faecalis TX4244] Length = 326 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + T++ D + + A GGK +R FL + L++ A++E +H +L Sbjct: 26 LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D+ +RRG T+ QY + A+ G+ L T F +I+ D + Sbjct: 86 IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204 + + G++ +L G++ + F + + KT L +C GA H+S+ Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + G ++GI FQ+ DD+LD D Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224 >gi|326777699|ref|ZP_08236964.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus XylebKG-1] gi|326658032|gb|EGE42878.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus XylebKG-1] Length = 342 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 15/184 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A +V + E IH SL HDD+ MD +R G +V+ Sbjct: 62 GGKRLRPLLTLLGAEFGDVRGEGGVEAAVVAELIHTASLHHDDV--MDEALLRHGVSSVN 119 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A+ +GN LL A + +S + I Q S + ++ GQ+ ++ Sbjct: 120 ARWGNTVAVRSGNWLLARAARLSAS---LAPEAIPLQAEAS-------ERLVRGQLRELV 169 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E ++ F + K+ +L+ + GA+ A A E L +GE+LG+ FQ++D Sbjct: 170 GPDGAERRLSHYFAVISDKSASLISLSLRLGAVQAGAPAGVGEALAAYGEHLGVAFQISD 229 Query: 226 DLLD 229 DLLD Sbjct: 230 DLLD 233 >gi|156973119|ref|YP_001444026.1| octaprenyl-diphosphate synthase [Vibrio harveyi ATCC BAA-1116] gi|156524713|gb|ABU69799.1| hypothetical protein VIBHAR_00798 [Vibrio harveyi ATCC BAA-1116] Length = 323 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L +++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSDAVNVIAEGEVQ-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A +N + L+ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPENVEVALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|134103316|ref|YP_001108977.1| polyprenyl diphosphate synthase component [Saccharopolyspora erythraea NRRL 2338] gi|291004465|ref|ZP_06562438.1| polyprenyl diphosphate synthase component [Saccharopolyspora erythraea NRRL 2338] gi|133915939|emb|CAM06052.1| polyprenyl diphosphate synthase component [Saccharopolyspora erythraea NRRL 2338] Length = 344 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 15/184 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R A + ++ A +E +H +L HDD+ MD +RRG + + Sbjct: 66 GGKRFRPLFALLAAQFGDPRTENVIKSAAVVEMVHLATLYHDDV--MDEATMRRGATSAN 123 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D AI+ G+ L A +++ T D R + ++ GQM + Sbjct: 124 ARWDNSVAILTGDFLFAQASRLVADLGT---DAAREMART-------FEALVTGQMRETV 173 Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 DE V K+ KTG+L+ A GA+ + AS + + G LG FQ++D Sbjct: 174 GVGRDEDPVDFYLKVIYEKTGSLIAIAGRFGALFSGASPEQVTAMERLGRILGTAFQISD 233 Query: 226 DLLD 229 D++D Sbjct: 234 DVID 237 >gi|315224101|ref|ZP_07865941.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287] gi|314945834|gb|EFS97843.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287] Length = 326 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 21/204 (10%) Query: 39 LLSAIRYALLG--GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 LL+ I Y ++ GK++R FLV + S V+ T R + IE IH +L+HDD+ Sbjct: 32 LLNRITYYIVNRKGKQMRPMFVFLVAKMVSGGKVSERT-YRGASVIELIHTATLVHDDV- 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +D+ RRG +++ + A++ G+ LL+ ++S DN L+ ++ Sbjct: 90 -VDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLRIIS-- 139 Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KER 209 + ++ M G++L I+ I E + I + KT L+ C GA Q E E+ Sbjct: 140 VAVREMSEGELLQIEKARRLDIVEEVYYEIIRQKTATLIAACCAMGACSVQPEQTELIEK 199 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 +R FGE +G+ FQ+ DDL D ED Sbjct: 200 MRLFGEYIGMAFQIKDDLFDYTED 223 >gi|257416435|ref|ZP_05593429.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG] gi|257158263|gb|EEU88223.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG] Length = 326 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + T++ D + + A GGK +R FL + L++ A++E +H +L Sbjct: 26 LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D+ +RRG T+ QY + A+ G+ L T F +I+ D + Sbjct: 86 IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204 + + G++ +L G++ + F + + KT L +C GA H+S+ Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + G ++GI FQ+ DD+LD D Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224 >gi|166711277|ref|ZP_02242484.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 332 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + A +++L +G LG FQ+ADD+L Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGADAQVQQQLYDYGMQLGFAFQIADDVL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|315143484|gb|EFT87500.1| polyprenyl synthetase [Enterococcus faecalis TX2141] Length = 326 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + T++ D + + A GGK +R FL + L++ A++E +H +L Sbjct: 26 LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D+ +RRG T+ QY + A+ G+ L T F +I+ D + Sbjct: 86 IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204 + + G++ +L G++ + F + + KT L +C GA H+S+ Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + G ++GI FQ+ DD+LD D Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224 >gi|282860737|ref|ZP_06269803.1| Trans-hexaprenyltranstransferase [Streptomyces sp. ACTE] gi|282564473|gb|EFB70009.1| Trans-hexaprenyltranstransferase [Streptomyces sp. ACTE] Length = 336 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 9/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV + + + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVMLASQFGDPDAPGVVPAAVVVELTHLATLYHDDV--MDEADVRRGVESAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A++ G+ L A I++ + I+++ L L+ D Sbjct: 111 TRWGNSVAVLTGDFLFARASHILADLGPEAV-RIQAEAFERLVTGQILETAGPRDGRDPV 169 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D ++D + KTG+L+ A GA+MA A ++ + L +GE LGI FQLADD+L Sbjct: 170 DHYMD------VLGGKTGSLVAVAGRFGAMMAGADESVVDILTQYGERLGIAFQLADDVL 223 Query: 229 DCEED 233 D D Sbjct: 224 DIASD 228 >gi|190573198|ref|YP_001971043.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas maltophilia K279a] gi|190011120|emb|CAQ44729.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas maltophilia K279a] Length = 332 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPMLVMLAGHAVGQAGPEHHQLAAIIEFIHTSTLLHDDV--VDESSLRRGRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L+ Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELERMPVMQILADATNRIAEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + + ++ L +G +LG FQ+ADD+L Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDYGMHLGYAFQIADDVL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|108804794|ref|YP_644731.1| trans-hexaprenyltranstransferase [Rubrobacter xylanophilus DSM 9941] gi|108766037|gb|ABG04919.1| Trans-hexaprenyltranstransferase [Rubrobacter xylanophilus DSM 9941] Length = 304 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 19/186 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + ALR AA E +H +LIHDD+ +D RRG PT Sbjct: 27 GGKRLRPLLLLLSAGIGAPVWEEALRAAAATEVLHTATLIHDDI--VDKAKSRRGAPTTV 84 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 +Y A+ G+ L AF +SS P+ + + R L Q G Sbjct: 85 ARYGREVAVATGDYLFAEAFAALSSIGDPRVIREFAEASRGLAAGELE-----QFRASGG 139 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 +D++D +++ K+KT L AC +G + S + + L +G+ LG+ FQ+ Sbjct: 140 PVDVED-YLEHI------KLKTAGLFRAACVAGGTLGGLSLPQIDALATYGQALGLAFQM 192 Query: 224 ADDLLD 229 +DD++D Sbjct: 193 SDDVMD 198 >gi|10801556|dbj|BAB16691.1| GGPP synthase 1 [Hevea brasiliensis] Length = 127 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 3/127 (2%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT HI + E A++AG+ LL +AFE I+ + + + L IG Sbjct: 1 NDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGA 60 Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E +D ++ I KT L+ A GAI+ + E E+LR + Sbjct: 61 EGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKY 120 Query: 214 GENLGII 220 +G++ Sbjct: 121 ARGIGLL 127 >gi|116874007|ref|YP_850788.1| polyprenyl synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742885|emb|CAK22009.1| polyprenyl synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 326 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPEFDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI ++ ++ +L G++ + Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + + KT L +C SGA + AS+ + G LG+ FQ+ Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQII 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|288922395|ref|ZP_06416585.1| Polyprenyl synthetase [Frankia sp. EUN1f] gi|288346266|gb|EFC80605.1| Polyprenyl synthetase [Frankia sp. EUN1f] Length = 338 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 11/188 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A L A+E +H +SL+HDDL MD RR + T Sbjct: 53 GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRATAW 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+AG+ LL A +++ + + + R+ ++L G+Q ++ GQ D+ Sbjct: 111 TVFGADGAILAGDALLGLATQVLL--EVEGEPGRRAAVIL----GAGVQDLVRGQAEDLL 164 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ + GA++A A + L +G LG FQL D Sbjct: 165 FESRSDVSVAETLHMEDGKTGALLACSASLGAVLAGAPGEVVDGLAEYGSRLGTAFQLID 224 Query: 226 DLLDCEED 233 DLL D Sbjct: 225 DLLGIWGD 232 >gi|282897366|ref|ZP_06305368.1| Polyprenyl synthetase [Raphidiopsis brookii D9] gi|281198018|gb|EFA72912.1| Polyprenyl synthetase [Raphidiopsis brookii D9] Length = 323 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L++ +L L R+ E IH SL+HDD+ +D IRRG P Sbjct: 44 GGKRIRPAIVLLISRATTLEEDISLGHRRLAEITEMIHTASLVHDDV--VDESDIRRGVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH + A++AG+ L + +++ + S++++ L QG L Sbjct: 102 TVHSLFGNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLAAGEIQQG------L 155 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D + KT +L+ + +S I+++ S L +G++LG+ FQ+ D Sbjct: 156 NRFDTSLSTETYLKKSYYKTASLIANSAKSAGILSNVSPQSANNLYNYGKDLGLAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|257087255|ref|ZP_05581616.1| polyprenyl synthetase [Enterococcus faecalis D6] gi|294780336|ref|ZP_06745705.1| polyprenyl synthetase [Enterococcus faecalis PC1.1] gi|307270277|ref|ZP_07551585.1| polyprenyl synthetase [Enterococcus faecalis TX4248] gi|256995285|gb|EEU82587.1| polyprenyl synthetase [Enterococcus faecalis D6] gi|294452600|gb|EFG21033.1| polyprenyl synthetase [Enterococcus faecalis PC1.1] gi|306513331|gb|EFM81955.1| polyprenyl synthetase [Enterococcus faecalis TX4248] gi|315026059|gb|EFT37991.1| polyprenyl synthetase [Enterococcus faecalis TX2137] gi|327535515|gb|AEA94349.1| putative trans-hexaprenyltranstransferase [Enterococcus faecalis OG1RF] Length = 326 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + T++ D + + A GGK +R FL + L++ A++E +H +L Sbjct: 26 LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D+ +RRG T+ QY + A+ G+ L T F +I+ D + Sbjct: 86 IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204 + + G++ +L G++ + F + + KT L +C GA H+S+ Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + + G ++GI FQ+ DD+LD D Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224 >gi|257066522|ref|YP_003152778.1| Polyprenyl synthetase [Anaerococcus prevotii DSM 20548] gi|256798402|gb|ACV29057.1| Polyprenyl synthetase [Anaerococcus prevotii DSM 20548] Length = 278 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 10/198 (5%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGY 99 A+ YA GK+IR+ L E L + N ++ L AIE I YSL+HDDLP+MD+ Sbjct: 37 AMLYAADSGKRIRASLFLENRRL-HTNEISKNDLLFALAIEMIQAYSLVHDDLPAMDDDD 95 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRGK +VH Y E AI+ G+ LL+ A ++ L+D + L +G GM Sbjct: 96 YRRGKESVHKHYGEDLAILTGDALLSEASMLMMD--VSLEDPSYLKAASYLMKKVGKDGM 153 Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 + GQ+LD+ + + ++ V + K KTG A + I+ + +L + L Sbjct: 154 ITGQILDLRRRKSYAEDFLVEVYDK-KTGDFFKGAIVAAGIVNGYDEEIIAKLERYSYYL 212 Query: 218 GIIFQLADDLLDCEEDLP 235 G+ FQ+ DDLL EED Sbjct: 213 GLGFQIQDDLL--EEDFK 228 >gi|313887289|ref|ZP_07820980.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I] gi|312923208|gb|EFR34026.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I] Length = 328 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 12/191 (6%) Query: 47 LLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 L GK IR +V CA L N T L IE +H SLIHDD+ +D RRG+ Sbjct: 45 LSSGKHIRPIIVGLCAQLCAGQTNEQT-LSAALVIELLHTASLIHDDV--IDWSDTRRGQ 101 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 PT++ Y A++ G+ +L+ AF E++S T + +Q L+ +Q L Sbjct: 102 PTLNALYSNHQAVLMGDYVLSTAFLELVSREHTPEMLRVVAQAGRDLSIGELMQLSLSKA 161 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 ++++ + + KTGAL + + GA+ A++ + +R G+ +G FQL Sbjct: 162 HTYREEDY------YAVVDRKTGALFEASAKLGALSVDATEEQVKRCSRLGQLMGRAFQL 215 Query: 224 ADDLLDCEEDL 234 DDL D ++ L Sbjct: 216 QDDLFDYDKAL 226 >gi|292490245|ref|YP_003525684.1| trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4] gi|291578840|gb|ADE13297.1| Trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4] Length = 322 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V A F+ + + IE IH +L+HDD+ +D+ +RRG+ T + Sbjct: 43 GGKRLRPVVVLLSARAFDYQGSCHIDIATIIEFIHTATLLHDDV--VDSSELRRGQKTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AFE++ +++R +L+ T N +G + Q+L+ Sbjct: 101 SIWGSEASVLVGDFLYSRAFEMMVD-----VNSMRVMEILARTTNTIAEGEVM-QLLNCH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + + KT L A + GA+++ E+E + +G +LG FQL DD+L Sbjct: 155 DPDTTEERYLDVIRSKTAKLFEAATQLGAVLSCRPAAEEEAMAAYGMHLGTAFQLTDDVL 214 Query: 229 D---CEEDLPK 236 D +DL K Sbjct: 215 DYSASSDDLGK 225 >gi|330718944|ref|ZP_08313544.1| geranyl pyrophosphate synthase [Leuconostoc fallax KCTC 3537] Length = 255 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 114/219 (52%), Gaps = 25/219 (11%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL----FNVNHLTALRVGAAI 79 +LQ S T + +AI+ L GK +R L + L +N N +T +GA++ Sbjct: 1 MLQQVSSSWTIGFKDIDTAIKSQLNAGKLVRPALTLLFSELTDEAYNENAIT---LGASV 57 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H +LIHDD+ +D +RRG+ ++ ++ + TA+ +G+ LLT F ++ Sbjct: 58 ELLHLATLIHDDI--IDESKLRRGQTSIQTRFGKDTAVYSGDYLLTGMFTLL-------- 107 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDET-QVFMIQ-KMKTGALMCFACESG 196 N + + ++ N L+ +L G++ Q+ + +D T +++Q K KT AL + G Sbjct: 108 -NKVNNIEVNQYANESLKEILFGELSQKQNRYRLDMTFDEYLLQIKGKTAALFRMSTLFG 166 Query: 197 AIMAHAS---QNEKERLRCFGENLGIIFQLADDLLDCEE 232 IM+ + N ++ ++ GE +G+ FQL DD LD E Sbjct: 167 -IMSRPNDEINNFRDLMQKIGETMGMTFQLLDDYLDFSE 204 >gi|154508652|ref|ZP_02044294.1| hypothetical protein ACTODO_01153 [Actinomyces odontolyticus ATCC 17982] gi|153798286|gb|EDN80706.1| hypothetical protein ACTODO_01153 [Actinomyces odontolyticus ATCC 17982] Length = 337 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 18/190 (9%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 A+ GGK++R L CA L + A+E H SL HDD+ MD+ RR Sbjct: 47 AVAGGKRMRPLLTLVCAQLGEPERALDEQVITAATAVELTHLASLYHDDV--MDSAPTRR 104 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G P+ + AI+AG+ L A +++S ++ + H + + G Sbjct: 105 GVPSAQHLWGNNRAILAGDILFARASLLVASLGPEMVAH----------HARTFERLCEG 154 Query: 163 QMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 Q+ + +V F +Q + KTG+L+ A GA+++ A + + + FGE +G+ Sbjct: 155 QLNETFGPTDGADRVDFYLQVLADKTGSLVSTAASFGALLSGAGKLMADVVSDFGEKVGV 214 Query: 220 IFQLADDLLD 229 FQ+ADD+LD Sbjct: 215 AFQIADDVLD 224 >gi|149912227|ref|ZP_01900805.1| octaprenyl-diphosphate synthase [Moritella sp. PE36] gi|149804686|gb|EDM64738.1| octaprenyl-diphosphate synthase [Moritella sp. PE36] Length = 323 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 10/202 (4%) Query: 34 QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 Q + L++ + Y ++ GGK+IR + T A + V A IE IH +L+HDD Sbjct: 26 QSDVALVNQVGYYIVNGGGKRIRPLIATLSARALGYQGQQHVDVAAIIEFIHTSTLLHDD 85 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D +RRG+ T + + +++ G+ L + +F++++ +N + +LS Sbjct: 86 V--VDESDMRRGRKTANAAFGNAASVLVGDFLYSRSFQMMAKL-----NNSKIIDILSDA 138 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 N+ +G + Q+++ D DE + + KT L A + A++A + ++ + Sbjct: 139 TNVIAEGEVL-QLMNCNDADTDEKRYMDVIYYKTAKLFEAATQLAAVIAEQPADIEQAMI 197 Query: 212 CFGENLGIIFQLADDLLDCEED 233 +G +LG FQL DD++D D Sbjct: 198 DYGVHLGAAFQLIDDVMDYTSD 219 >gi|147677304|ref|YP_001211519.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] gi|146273401|dbj|BAF59150.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] Length = 321 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 19/209 (9%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 ++QT + + T+ + LL+A GGK++R L A +N N L + A+E IH Sbjct: 22 VVQTQNPLLTETSTHLLNA------GGKRLRPALCLFGAKFYNYNLEKVLPLAVALELIH 75 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 +L+HDD+ +D RRG PTV ++ + G L + ++S + K I Sbjct: 76 MATLVHDDV--VDASMTRRGIPTVKAKWGNSISTHVGTYLFAKSLILLSKYE---KTPII 130 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ-KMKTGALMCFACESGAIMA 200 ++++ S++ M G++ I F + ++ + K+KT L+ + + GA Sbjct: 131 ARVLSSISVK-----MCEGEIQQISSSFNICQSIKEYLHRIKLKTALLIAASIQLGAAAC 185 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229 A + LR +G N+G+ FQ+ DD+LD Sbjct: 186 GAPVSIHLPLRRYGHNIGMAFQITDDILD 214 >gi|298207668|ref|YP_003715847.1| polyprenyl synthetase [Croceibacter atlanticus HTCC2559] gi|83850305|gb|EAP88173.1| polyprenyl synthetase [Croceibacter atlanticus HTCC2559] Length = 311 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 36/195 (18%) Query: 50 GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R FLV + S +VN T R A IE IH +L+HDD+ +D+ RRG + Sbjct: 31 GKQMRPMFVFLVAKMVSEGSVNDRT-YRGAAVIELIHTATLVHDDI--VDDSNRRRGFFS 87 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQ 157 ++ + A++ G+ LL+ L+LS+ +N + ++ Sbjct: 88 INALWKNKIAVLVGDYLLSKG------------------LLLSIDNNDFDLLKIISVAVR 129 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M G++L I+ I E + I K KT L+ C GA + + ++ +R FG Sbjct: 130 EMSEGELLQIEKARRLDITEDVYYDIIKKKTATLIAACCSLGAASVNPNSDDVTLMRLFG 189 Query: 215 ENLGIIFQLADDLLD 229 E +G+ FQ+ DDL D Sbjct: 190 EKIGMAFQIKDDLFD 204 >gi|227486380|ref|ZP_03916696.1| possible trans-hexaprenyltranstransferase [Anaerococcus lactolyticus ATCC 51172] gi|227235561|gb|EEI85576.1| possible trans-hexaprenyltranstransferase [Anaerococcus lactolyticus ATCC 51172] Length = 330 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 8/154 (5%) Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E H SLIHDD+ +D+ +RR + +Y + A+ AG+ ++ F +++ Sbjct: 78 AAAVEITHLASLIHDDI--IDDSTLRRSHKSTQAKYGKDVAVFAGDYMIAKVFSYLANE- 134 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195 L D I+ +++ T G +G ++ + + + E + F KT + C Sbjct: 135 -NLYDEIK---VIANTIKHMCNGEVGQNLIKYRLD-MGEDEYFENISGKTASFFKTVCYF 189 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA A Q + ER+ FGENLG++FQL DDLLD Sbjct: 190 GARNAGFGQMDTERMVAFGENLGLMFQLKDDLLD 223 >gi|116292709|gb|ABJ97673.1| polyprenyl synthase [uncultured bacterium] Length = 328 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 8/183 (4%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R L A L + A + +H +LIHDD+ +D Y RRG +++ Sbjct: 49 GKEVRPILTFLSARLLGDIQESTYVAAALTQLLHTATLIHDDV--VDEAYERRGFFSINA 106 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ LL+ + K + + S + ++ LQ + + LDI + Sbjct: 107 LWKSKAAVLVGDYLLSKGLLVALENKEYDQLQVVSDAVREMSEGELLQ-LEKSRKLDITE 165 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + F I KT +L+ + GA+ A+++++E+L+ FGE LG+ FQ+ DDL D Sbjct: 166 DV-----YFDIIYKKTASLIASCTQLGALSVGATKDQQEKLKRFGECLGVAFQMKDDLFD 220 Query: 230 CEE 232 E+ Sbjct: 221 YEK 223 >gi|145628195|ref|ZP_01783996.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 22.1-21] gi|144979970|gb|EDJ89629.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 22.1-21] Length = 274 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 86/151 (56%), Gaps = 8/151 (5%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T AF++++ QL Sbjct: 24 VEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVA----QL 77 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 ++++ +++ N+ +G + Q++++ D E + KT L A ++ AI Sbjct: 78 -ESLKILSIMADATNVLAEGEVQ-QLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAI 135 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +A ++ +++ L+ +G LG FQL DD+LD Sbjct: 136 VAGGTEAQEKALQDYGRYLGTAFQLVDDVLD 166 >gi|269836542|ref|YP_003318770.1| polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745] gi|269785805|gb|ACZ37948.1| Polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745] Length = 321 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 34/197 (17%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A FN L +E +H SLIHDD ++D +RRG+PT++ Sbjct: 38 GGKRLRPLLLLLAARPFNYVFERLLPAAVGVELLHTASLIHDD--TVDKAMLRRGRPTLN 95 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ T I+ G+ Y F RS +M + T N + + + I Sbjct: 96 SLFNTETVILLGD----YIFA-------------RSAMMAAATQNPRVVQVFASSLAHIC 138 Query: 169 DEFIDETQVFMIQKM-------------KTGALMCFACESGAIMAHASQNEKERLRCFGE 215 D + E +F +++ KT +L + E GAI+ A+ + + LR FG Sbjct: 139 DGQLRE--IFTARELQQSIDDYRKRIFGKTASLFAGSAEMGAILGEANDEQIDALRRFGG 196 Query: 216 NLGIIFQLADDLLDCEE 232 +LG+ FQ+ DD+LD E Sbjct: 197 HLGMAFQIVDDVLDLRE 213 >gi|78188931|ref|YP_379269.1| polyprenyl synthetase [Chlorobium chlorochromatii CaD3] gi|78171130|gb|ABB28226.1| polyprenyl synthetase [Chlorobium chlorochromatii CaD3] Length = 324 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 33/203 (16%) Query: 44 RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 RY L GK+IR +V A+L + ++ R +E +H +LIHDD+ +D +RR Sbjct: 37 RYVLKQQGKQIRPAIVLLSANLCGGVNESSYRAAIMVELLHSATLIHDDV--VDGAEMRR 94 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN--------- 153 G P+++ + +++ G+ +L L+ SL HN Sbjct: 95 GLPSINALWKNKISVLMGDYMLARG------------------LLYSLDHNDYGFLHMVS 136 Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 ++ M G++L IQ I E + KT +L+ +C GA+ A ++ L Sbjct: 137 EAVRRMSEGEILQIQKTRSLDITEKDYLSVISDKTASLISSSCAMGAMSATTDESNIAAL 196 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 + +GE LG+ FQ+ DDLLD D Sbjct: 197 KNYGEYLGLAFQIRDDLLDYTGD 219 >gi|222151368|ref|YP_002560524.1| component B of hexaprenyl diphosphate synthase [Macrococcus caseolyticus JCSC5402] gi|222120493|dbj|BAH17828.1| component B of hexaprenyl diphosphate synthase [Macrococcus caseolyticus JCSC5402] Length = 325 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 14/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R V L +R ++E IH SL+HDD +DN RRG +VH Sbjct: 43 GGKRVRPMFVLLSGFLAKGEKEHLIRTAVSLELIHMASLVHDDY--IDNSDKRRGNTSVH 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ TAI G+ LL A E I+ I S+ +L + G+ + Sbjct: 101 MAFNKDTAIRTGHFLLARALENIAEINDSQYHQIFSKTILEVCF---------GEFDQMA 151 Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D F I T+ KT L+ +C GA+ + ++ FG +G+ +Q+ D Sbjct: 152 DRFNYPITFTEYLRRINRKTAILIEASCHLGAVSTNLDSYTTYHVKQFGHCIGMSYQIID 211 Query: 226 DLLDCEED 233 D+LD D Sbjct: 212 DILDYTSD 219 >gi|317486885|ref|ZP_07945696.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6] gi|316921875|gb|EFV43150.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6] Length = 325 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 20/187 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + AA+E H +L+HDD+ MDN +RRG H Sbjct: 41 GGKRLRPLLTVLVARLLGYADNDIYPLAAAMEMFHVATLLHDDV--MDNAEMRRGSTATH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + I+AG+ LL +I++ P+ L+ + + G++L Sbjct: 99 KVFGVTETILAGDALLAKGNQIVAGFGDPR------------LTAATSDAIAQTANGEIL 146 Query: 166 DIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 +I ++ + + + ++ KT ++ +C GA+ A+ + + +G NLG+ FQ Sbjct: 147 EIANQGKNAPDLLIYNQIIAGKTAWMIRTSCNIGAVRANGTPEQVAGATDYGFNLGMAFQ 206 Query: 223 LADDLLD 229 + DD LD Sbjct: 207 IVDDALD 213 >gi|16081558|ref|NP_393914.1| bifunctional short chain isoprenyl diphosphate synthase related protein [Thermoplasma acidophilum DSM 1728] gi|10639606|emb|CAC11578.1| bifunctional short chain isoprenyl diphosphate synthase related protein [Thermoplasma acidophilum] Length = 322 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 13/193 (6%) Query: 44 RYAL-LGGKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 RY + GGK+ R L + S + + L + E IH SLIHDD+ +DN +R Sbjct: 34 RYTIEAGGKRFRPLLTILAYESSTDEPYFKILDLATGYELIHTASLIHDDI--IDNSPMR 91 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG+PT+ + AI+ + L A+E+ S I S++M + + +L Sbjct: 92 RGRPTLSYKEGVNNAIVVADYLFAKAYELGSRYGP-----IVSKVMADASSRLAEGQIL- 145 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA-IMAHASQNEKERLRCFGENLGII 220 + +++ + I E + I + KT AC GA I A+A N + L F NLG+ Sbjct: 146 -EAVNLGNLNISEDTYYRIIENKTAHFFE-ACARGATIAANADLNTRNMLSGFAFNLGMA 203 Query: 221 FQLADDLLDCEED 233 FQ+ DD+LD D Sbjct: 204 FQVTDDILDITGD 216 >gi|260579301|ref|ZP_05847183.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Corynebacterium jeikeium ATCC 43734] gi|258602430|gb|EEW15725.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Corynebacterium jeikeium ATCC 43734] Length = 336 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 22/192 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A + AA+ E H +L HDD+ MD RRG + Sbjct: 56 GGKRFRVMFALLAAHYGEKPTAQEVHEAAAVVELTHLATLYHDDV--MDESDQRRGAESA 113 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-- 165 + +++ AI+AG+ L A EI+++ Q + Q ++ GQM Sbjct: 114 NKRWNNSVAILAGDYLFAIASEIMATLGAQTVQHFAETF----------QELVTGQMRET 163 Query: 166 ----DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D +DE E + +IQ+ KTG L+ A GA+ + AS+ +E L FG N+G IF Sbjct: 164 IGARDGEDEI--EHYLTVIQE-KTGVLIASAGWLGALHSGASEEHREALFRFGRNVGQIF 220 Query: 222 QLADDLLDCEED 233 Q+ DD++D D Sbjct: 221 QIVDDIIDIWAD 232 >gi|191639239|ref|YP_001988405.1| Trans-hexaprenyltranstransferase, component II [Lactobacillus casei BL23] gi|190713541|emb|CAQ67547.1| Trans-hexaprenyltranstransferase, component II [Lactobacillus casei BL23] gi|327383318|gb|AEA54794.1| Polyprenyl synthetase [Lactobacillus casei LC2W] gi|327386501|gb|AEA57975.1| Polyprenyl synthetase [Lactobacillus casei BD-II] Length = 325 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 15/189 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R + +V+ + + AAIE +H +LIHDD+ +D RR + T+ Sbjct: 46 GGKLLRPAYCLLFSRFQDVDREKMIALAAAIETLHTATLIHDDI--IDKSPTRRNQVTIQ 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167 Q+ TA+ AG+ L F+++S + L+ S+ + G ++ +L G++ + Sbjct: 104 KQFGPDTAVYAGDYLFVVCFKLLSHYASSLR---------SIQQDSGSMEKILKGELDQM 154 Query: 168 QDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + ++ Q KTG L +C GA + +S + G N+GI FQL Sbjct: 155 ATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYESGSSPTFAKNAEKIGMNIGIAFQLL 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDILDYTSD 223 >gi|194290791|ref|YP_002006698.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424] gi|193224626|emb|CAQ70637.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424] Length = 345 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 66 GGKRLRPVILLLTARALGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTAN 123 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ ++R +LS N+ +G + Q+L++ Sbjct: 124 AVFGNAASVLVGDFLYSRAFQMMVD-----AGSMRIMEILSNATNVIAEGEVL-QLLNMH 177 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + KT L A + GA+++ A +E +G +G FQL DD+L Sbjct: 178 DPDVTVERYLQVIRYKTAKLFEAAAQLGAVLSGADAQMEEAAAEYGRRIGTAFQLIDDML 237 Query: 229 D 229 D Sbjct: 238 D 238 >gi|262403940|ref|ZP_06080497.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] gi|262349902|gb|EEY99038.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] Length = 323 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84 H Q + L++ + + ++ GGK++R L A +H TA A IE IH Sbjct: 22 HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 78 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ Sbjct: 79 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SLKI 131 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++S N+ +G + Q+++ D E + KT L A + GAI+ AS Sbjct: 132 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASS 190 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G+ LG FQL DD++D D Sbjct: 191 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 219 >gi|149184238|ref|ZP_01862556.1| Polyprenyl synthetase [Erythrobacter sp. SD-21] gi|148831558|gb|EDL49991.1| Polyprenyl synthetase [Erythrobacter sp. SD-21] Length = 350 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 8/188 (4%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GGK +R + A +F A R AA+E +H LIHDD+ D +RRG Sbjct: 51 YPKRGGKMLRPGICIANALIFGGELTQAARCAAAVELLHNALLIHDDV--QDESDLRRGL 108 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 PT+H Q+ AI AG+ LL AF+ + L ++ +Q ++ +T + Q G + Sbjct: 109 PTLHAQHGVALAINAGDALLFTAFQPLLDAIRPLGADL-AQRVIEVTIAMARQTAEGQAL 167 Query: 165 -LDIQD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 L +D E + + M K M + + G +M + + R+ FG LG+ Sbjct: 168 ELGWRDRNVTELTEADYLRMALKKTAWMGMIWPAQLGVLMGGRGRIDPARVVRFGHFLGL 227 Query: 220 IFQLADDL 227 FQ+ DDL Sbjct: 228 AFQIEDDL 235 >gi|326329624|ref|ZP_08195946.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Nocardioidaceae bacterium Broad-1] gi|325952620|gb|EGD44638.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Nocardioidaceae bacterium Broad-1] Length = 337 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 26/214 (12%) Query: 26 QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV---TECASLFNVNHLTALRVGAAIECI 82 +++S T+ LL A GGK+ R LV EC + + + +E Sbjct: 42 RSSSPFVTEAASHLLEA------GGKRFRPLLVLLAAECGPDTLADEV--ITAACIVELT 93 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL-KDN 141 H SL HDD+ MD +RRG+ T + ++D AI+ G+ + F SS +L D Sbjct: 94 HQASLYHDDV--MDEALLRRGEDTANARFDNHVAILTGD----FLFARSSSLTAELGPDA 147 Query: 142 IRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 +R Q L L+G+ + +D D ++ + KTG L+ + GA+ Sbjct: 148 VRIQAATFAKLVEGQILEGVAPAEGVDPVDHHLE------VLAGKTGVLIATSALYGALF 201 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A A + ++ L +G+ +G+ FQL+DD+LD D Sbjct: 202 AGADKEIQDALVAYGDIVGVAFQLSDDILDIASD 235 >gi|319425378|gb|ADV53452.1| Polyprenyl synthetase [Shewanella putrefaciens 200] Length = 331 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPLLSVLAARTVSYEGDAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L DN+R +L+ T N+ +G + Q+++ Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DNMRVLRVLADTTNVLAEGEVL-QLMNCN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++A A+ + L +G+ LG FQL DDLL Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEHETALGNYGKYLGTAFQLTDDLL 222 Query: 229 DCEED 233 D D Sbjct: 223 DYTAD 227 >gi|149199615|ref|ZP_01876648.1| Trans-hexaprenyltranstransferase [Lentisphaera araneosa HTCC2155] gi|149137268|gb|EDM25688.1| Trans-hexaprenyltranstransferase [Lentisphaera araneosa HTCC2155] Length = 326 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 17/182 (9%) Query: 50 GKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GK++R LV F + +A ++ A E IHC SL+HDD+ +D+ +RR PT+ Sbjct: 50 GKQLRPLLV------FTILGQQTSANKLAAVCESIHCASLVHDDI--IDDCRLRRNLPTM 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + +D A++ G+ + T F + S + + +Q + +L LQ + Sbjct: 102 NSIHDNSIALLLGDLMFTSIFTLSSCLPSWVTSE-SAQTIKTLIEGELLQQTYKCDIAVT 160 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D+++D ++QK KTGAL+ F ++ + +A + ++ + + G+IFQ+ADD Sbjct: 161 KDQYLD-----VLQK-KTGALLSFCTKAASRLADKNPDDVQLAGEYANTFGLIFQIADDW 214 Query: 228 LD 229 D Sbjct: 215 AD 216 >gi|328949208|ref|YP_004366545.1| polyprenyl synthetase [Treponema succinifaciens DSM 2489] gi|328449532|gb|AEB15248.1| Polyprenyl synthetase [Treponema succinifaciens DSM 2489] Length = 362 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 21/202 (10%) Query: 48 LGGKKIRSFLVT----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 LGGK+ R L+ CA + A + +E +H SLIHDD+ D+ +RRG Sbjct: 56 LGGKRWRPLLLVLCARACAKDKEKSQEAAYLLAPLVEFVHTASLIHDDIE--DSSPVRRG 113 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 KP +I Y TAI AG+ L A I + +LK+ + S ++ L + Sbjct: 114 KPAAYITYGIDTAINAGSWLYFEAPLCIEKLNCSIELKNRLYSNYLMELRR------LHL 167 Query: 162 GQMLDIQDEFIDETQVFMIQ------KMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GQ +DI D T+V +Q K KTG L A ++G + ++A + ++ Sbjct: 168 GQAMDIA-WHRDNTKVPSVQEYLKMVKGKTGTLASLAAKTGTLASNADEETVKKAGIIAS 226 Query: 216 NLGIIFQLADDLLDCEEDLPKK 237 +G FQ+ DD+++ P K Sbjct: 227 EIGAGFQIIDDVINLTTGNPGK 248 >gi|227533688|ref|ZP_03963737.1| trans-hexaprenyltranstransferase, component II [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301067307|ref|YP_003789330.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str. Zhang] gi|227188672|gb|EEI68739.1| trans-hexaprenyltranstransferase, component II [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300439714|gb|ADK19480.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str. Zhang] Length = 325 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 15/189 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R + +V+ + + AAIE +H +LIHDD+ +D RR + T+ Sbjct: 46 GGKLLRPAYCLLFSRFQDVDREKMIALAAAIETLHTATLIHDDI--IDKSPTRRNQVTIQ 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167 Q+ TA+ AG+ L F+++S + L+ S+ + G ++ +L G++ + Sbjct: 104 KQFGPDTAVYAGDYLFVVCFKLLSHYASSLR---------SIQQDSGSMEKILKGELDQM 154 Query: 168 QDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + ++ Q KTG L +C GA + +S + G N+GI FQL Sbjct: 155 ATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYESGSSPTFAKNAEKIGMNIGIAFQLL 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDILDYTSD 223 >gi|281204458|gb|EFA78653.1| hypothetical protein PPL_08108 [Polysphondylium pallidum PN500] Length = 417 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%) Query: 33 TQHNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTA-------LRVGAAIECIH 83 TQ LL +I Y + GK+IR ++ A N + L++ +E +H Sbjct: 91 TQLTHPLLKSIGTYYFEMKGKRIRPTVLLLLARAITSNDCPSEPISESQLKLAQVVEMLH 150 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 SL+HDD+ +D RR +V+ Y AI+ GN L ++S+ +R Sbjct: 151 TASLVHDDV--IDGADTRREMASVNCAYSNKLAILCGNFLTARTIVLLST--------LR 200 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 + + L NI + ++ G+++ I+ +KT +L C S A+++ A Sbjct: 201 NHHVTELVSNI-ISDLVDGELMQIKSNSTSFESYIRKTYLKTASLFANGCRSIAVLSGAD 259 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229 N FG+NLG+ FQ+ DDLLD Sbjct: 260 ANMTNMATEFGKNLGLAFQIIDDLLD 285 >gi|317128581|ref|YP_004094863.1| heptaprenyl diphosphate synthase component II [Bacillus cellulosilyticus DSM 2522] gi|315473529|gb|ADU30132.1| heptaprenyl diphosphate synthase component II [Bacillus cellulosilyticus DSM 2522] Length = 323 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR V A N +G A+E IH SL+H +D+ +RRGK T+ Sbjct: 43 GGKRIRPVFVLLSAQFGEYNIEEIKNIGVALEMIHMASLVH--DDVVDDADLRRGKKTIK 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D A+ G+ + A EI + T I S ++ M G++ I+ Sbjct: 101 SKWDNRVAMYTGDYIFAKAVEIATYYDTPDIHKILSHALVE---------MCIGEVEQIR 151 Query: 169 DEFIDETQ----VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D++ D Q F K KT L+ +C+ GAI + A + L FG N+G+ FQ+ Sbjct: 152 DQY-DWNQNLRMYFRRIKRKTALLIAISCQLGAIASGAPEAHVRALSRFGYNVGMAFQIT 210 Query: 225 DDLLD 229 DD+LD Sbjct: 211 DDILD 215 >gi|320536785|ref|ZP_08036784.1| polyprenyl synthetase [Treponema phagedenis F0421] gi|320146361|gb|EFW37978.1| polyprenyl synthetase [Treponema phagedenis F0421] Length = 349 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 20/204 (9%) Query: 41 SAIRYALLGGKKIRSFLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 S I + GGK IR A L F+ + + AA+E +H +L+HDD+ +D Sbjct: 61 SLIEFLHAGGKLIRPVFFLLFAHLGEETFDSDP-AIIETAAALELLHMATLVHDDI--ID 117 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG ++ + + A+ AG+ LLT F +I+ NI + +L + + Sbjct: 118 NSPLRRGIASIQNIHGKSIAVYAGDYLLTVFFTLIAK-------NISDKELL-VQSAASM 169 Query: 157 QGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 Q +L G++ + +F E V F I + KT L +C G A ++ +E+ + Sbjct: 170 QRLLEGELHQYRMKFNPEITVSDYFQIIEGKTAELFYLSCYLGISFAK-NKTYQEQAKRI 228 Query: 214 GENLGIIFQLADDLLDCEEDLPKK 237 G+N+G FQ+ DD+LD ++LP+K Sbjct: 229 GKNIGCAFQIIDDILDY-DNLPQK 251 >gi|257078168|ref|ZP_05572529.1| trans-hexaprenyltranstransferase [Enterococcus faecalis JH1] gi|256986198|gb|EEU73500.1| trans-hexaprenyltranstransferase [Enterococcus faecalis JH1] Length = 328 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 70 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGKIGENIGLAFQIIDDILD 220 >gi|307328645|ref|ZP_07607818.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu 4113] gi|306885757|gb|EFN16770.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu 4113] Length = 336 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVLLAAQFGDPHAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVSSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +++ A++ G+ L A I++ + +R Q + ++ GQ+L+ Sbjct: 111 VRWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILETA 160 Query: 169 D--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D + ++ + KTG+L+ + GA+M+ A ++ L +GE LG+ FQLAD Sbjct: 161 GPRDGRDPVEHYLDVLAGKTGSLIAVSGRFGAMMSGADESIVSILTQYGERLGMAFQLAD 220 Query: 226 DLLDCEED 233 D+LD D Sbjct: 221 DVLDIASD 228 >gi|289613953|emb|CBI59187.1| unnamed protein product [Sordaria macrospora] Length = 444 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG P+ ++++ A++AG+ LL A ++ Sbjct: 186 RLAEITELIHTASLLHDDV--IDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALA- 242 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183 +L+ +L+ ++ N ++ G+ + +++ ++ +ET + +QK + Sbjct: 243 ---RLRHAEVVELLATVIAN-----LVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYL 294 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ +C + A++ A + +G+NLG+ FQL DD+LD Sbjct: 295 KTASLISKSCRASALLGGADAATVDAAYLYGKNLGLAFQLVDDMLD 340 >gi|315283868|ref|ZP_07871917.1| heptaprenyl diphosphate synthase component 2 [Listeria marthii FSL S4-120] gi|313612487|gb|EFR86580.1| heptaprenyl diphosphate synthase component 2 [Listeria marthii FSL S4-120] Length = 288 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 8 GGKLLRPAFALLSAQAGPDFDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 65 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI + NI + +L G++ + Sbjct: 66 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIEFN-----SKNI--EKILMGELDQM 117 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + + KT L +C SGA + AS+ + G LG+ FQ+ Sbjct: 118 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGASGSKASRLTVAKCYNIGHYLGMAFQII 177 Query: 225 DDLLD 229 DD+LD Sbjct: 178 DDVLD 182 >gi|326772137|ref|ZP_08231422.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Actinomyces viscosus C505] gi|326638270|gb|EGE39171.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Actinomyces viscosus C505] Length = 369 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/249 (28%), Positives = 110/249 (44%), Gaps = 37/249 (14%) Query: 1 MNGGLPSKLQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57 M G LP E RI L +D L++ + N A GGK++R L Sbjct: 1 MIGSLPLSAPELESRIIPALQTIEDRLMEVVTSADETINP---PTSHLAEAGGKRLRPVL 57 Query: 58 VTECASLFNVNHLTA----LR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112 A L + L A +R G A+E H +L HDD+ MD +RRG P+ + Sbjct: 58 ALLTAQLGD-PALAATGEEIRDAGVAVELTHIATLYHDDV--MDEAPLRRGAPSAQTVWG 114 Query: 113 EVTAIIAGNGLLTYAFEIISS--PKTQL---KDNIR---SQLMLSLTHNIGLQGMLGGQM 164 AI+ G+ L+ A +++++ P+ + K R QL +L G Sbjct: 115 NSAAILTGDVLVARASQLVAALGPEAVMAHAKTFERLCMGQLHETLPRPAGT-------- 166 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D D +I QV KTG+L+ + GA++ A ++ + FGE +G+ FQLA Sbjct: 167 -DPVDHYI---QVL---ADKTGSLIAVSARYGAMLTGAGTRTEQIVEEFGERIGVAFQLA 219 Query: 225 DDLLDCEED 233 DD++D D Sbjct: 220 DDVIDLMSD 228 >gi|299821639|ref|ZP_07053527.1| trans-hexaprenyltranstransferase [Listeria grayi DSM 20601] gi|299817304|gb|EFI84540.1| trans-hexaprenyltranstransferase [Listeria grayi DSM 20601] Length = 323 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 17/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L + ++ A A+E IH S++HDD+ +DN +RRG+ T+ Sbjct: 44 GGKRIRPLFVCLTARLTEKPDQSKMKYAAVAVELIHMASIVHDDV--VDNASLRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + + + T +K+ +++ S+T + G++ + Sbjct: 102 KSRWGNHIAMYTGDYLFAKSLDYM----TNIKEIEAHEMLASVTVELAT-----GEIEQL 152 Query: 168 QDEFIDETQVFMIQ----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + ++ D TQ K KT L+ +C GA+++ ++L FG +G+ FQ+ Sbjct: 153 KSKY-DVTQSIRTYLRRIKRKTALLIAVSCGLGAVISGQDAATTKKLYQFGYYVGMAFQI 211 Query: 224 ADDLLD 229 DD+LD Sbjct: 212 QDDVLD 217 >gi|153874225|ref|ZP_02002523.1| Polyprenyl synthetase [Beggiatoa sp. PS] gi|152069311|gb|EDN67477.1| Polyprenyl synthetase [Beggiatoa sp. PS] Length = 337 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A F + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 44 GGKRLRPMLLLLSARAFAYQGTHHIDLAAIVEFIHTATLLHDDV--VDASLLRRGQETAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ +N+R +LS N+ +G + Q+L+ Sbjct: 102 NIWGNEASVLVGDFLYSRAFQMMVDI-----NNMRVMKILSEATNVMAEGEVL-QLLNCY 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + KT L A + GA+++ ++ + +G +LGI FQL DD L Sbjct: 156 EPDTTEMDYLRVICAKTAKLFEAAAQLGAVISEQPSEYEKAMAMYGMHLGIAFQLIDDAL 215 Query: 229 D 229 D Sbjct: 216 D 216 >gi|328774161|gb|EGF84198.1| hypothetical protein BATDEDRAFT_29284 [Batrachochytrium dendrobatidis JAM81] Length = 356 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 23/171 (13%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T R+ E IH SL+HDD+ +D RR P+V+ ++ AI+AG+ LL A Sbjct: 93 TQRRLAEITEMIHTASLLHDDV--IDISMTRRNTPSVNAEFGNKMAILAGDFLLARA--- 147 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----------DETQVFM 179 S +L+D +L+ ++ N ++ G+ + +++ + D Q +M Sbjct: 148 -SVALARLRDPRVVELLSTVISN-----LVEGEFMQLRNSALGGSKSAYSAVHDRFQYYM 201 Query: 180 IQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + MKT +L+ +C S A++ + + E +G NLG+ FQL DD++D Sbjct: 202 EKTYMKTASLIAISCRSSAVLGGCTDDVIESAYLYGRNLGLAFQLVDDMMD 252 >gi|68536956|ref|YP_251661.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium K411] gi|68264555|emb|CAI38043.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium K411] Length = 353 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 22/192 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A + AA+ E H +L HDD+ MD RRG + Sbjct: 73 GGKRFRVMFALLAAHYGEKPTAQEVHEAAAVVELTHLATLYHDDV--MDESDQRRGAESA 130 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-- 165 + +++ AI+AG+ L A EI+++ Q + Q ++ GQM Sbjct: 131 NKRWNNSVAILAGDYLFAIASEIMATLGAQTVQHFAETF----------QELVTGQMRET 180 Query: 166 ----DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D +DE E + +IQ+ KTG L+ A GA+ + AS+ +E L FG N+G IF Sbjct: 181 IGARDGEDEI--EHYLTVIQE-KTGVLIASAGWLGALHSGASEEHREALFRFGRNVGQIF 237 Query: 222 QLADDLLDCEED 233 Q+ DD++D D Sbjct: 238 QIVDDIIDIWAD 249 >gi|309812382|ref|ZP_07706137.1| polyprenyl synthetase [Dermacoccus sp. Ellin185] gi|308433687|gb|EFP57564.1| polyprenyl synthetase [Dermacoccus sp. Ellin185] Length = 342 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 40/231 (17%) Query: 9 LQENSKRIDTILD--DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 L+ + R+D ++D L++ ASH L+ A GGK+ R L + L Sbjct: 34 LERVNARLDVVVDHDSPLVREASH-------HLVDA------GGKRFRPMLTLLTSMLGT 80 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A +E H SL HDD+ MD IRRG P+ + Y TAI+ G+ L Sbjct: 81 GISDEVVDAAAGVELTHLASLYHDDV--MDEADIRRGVPSANAVYGNSTAILIGDLLFGK 138 Query: 127 AFEIIS--SPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM 179 A E+I+ P+ Q + +R + GQ+ D + + D + ++ Sbjct: 139 ASELIAHLGPEAVILQARTFVR---------------LCAGQIEDERQTPDGADPMEYYL 183 Query: 180 -IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + KTG L+ A + GA+ + + E L +GE +G++FQL+DD+LD Sbjct: 184 KVLADKTGVLIAAAAQYGAMFSGCDERTVEVLGRYGELVGLVFQLSDDILD 234 >gi|21232167|ref|NP_638084.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767704|ref|YP_242466.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|188990821|ref|YP_001902831.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris pv. campestris str. B100] gi|21113920|gb|AAM42008.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573036|gb|AAY48446.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|167732581|emb|CAP50775.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris pv. campestris] Length = 332 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + A ++ L +G LG FQ+ADD+L Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGADAQVQQCLYDYGMQLGFAFQIADDVL 224 Query: 229 DCEED 233 D D Sbjct: 225 DYAAD 229 >gi|46908813|ref|YP_015202.1| polyprenyl synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|226225186|ref|YP_002759293.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes Clip81459] gi|254931090|ref|ZP_05264449.1| polyprenyl synthetase [Listeria monocytogenes HPB2262] gi|46882086|gb|AAT05379.1| polyprenyl synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|225877648|emb|CAS06362.1| Putative heptaprenyl diphosphate synthase component II [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293582635|gb|EFF94667.1| polyprenyl synthetase [Listeria monocytogenes HPB2262] gi|328469814|gb|EGF40731.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes 220] gi|332313071|gb|EGJ26166.1| Polyprenyl synthetase [Listeria monocytogenes str. Scott A] Length = 326 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPDYDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI ++ ++ +L G++ + Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + + KT L +C SGA + A++ + G LG+ FQ+ Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|229490364|ref|ZP_04384205.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis SK121] gi|229322654|gb|EEN88434.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis SK121] Length = 379 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 94/212 (44%), Gaps = 37/212 (17%) Query: 45 YALLGGKKIR-SFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + L GGK++R SF T N +R AA+E + +L+HDD+ +D Sbjct: 64 FVLRGGKRVRPSFAWTGWLGAGGDPNGKNADAVIRACAALELVQACALVHDDI--IDAST 121 Query: 100 IRRGKPTVHIQYD----------------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 RRG PTVH++++ E AI+ G+ L +A ++I + R Sbjct: 122 TRRGFPTVHVEFENQHRDEEWSGDSAHFGEAVAILLGDLALAWADDMIRESGISPEAAAR 181 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DET--QVFMIQKMKTGALMCFACES----G 196 + S +LGGQ LDI +E DET + + KT A + E G Sbjct: 182 VSPVWSAMRT----EVLGGQFLDISNEARGDETVEAAMRVNRYKTAA---YTIERPLHLG 234 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A + A + R FG ++GI FQL DDLL Sbjct: 235 AALFGADAELVDAYRTFGTDIGIAFQLRDDLL 266 >gi|157374092|ref|YP_001472692.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3] gi|157316466|gb|ABV35564.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3] Length = 323 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPLLSILAARAIDYKGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L N+ +L+ N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELG-NMEVLEVLADATNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A + + L +G+ LG FQL DDLL Sbjct: 155 DPDTTEESYMRVIYCKTAKLFEAATRLAGVLAQSPIEAQNALADYGKFLGTAFQLTDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTAD 219 >gi|116495752|ref|YP_807486.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC 334] gi|239630159|ref|ZP_04673190.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116105902|gb|ABJ71044.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC 334] gi|239527771|gb|EEQ66772.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 320 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 15/189 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R + +V+ + + AAIE +H +LIHDD+ +D RR + T+ Sbjct: 41 GGKLLRPAYCLLFSRFQDVDREKMIALAAAIETLHTATLIHDDI--IDKSPTRRNQVTIQ 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167 Q+ TA+ AG+ L F+++S + L+ S+ + G ++ +L G++ + Sbjct: 99 KQFGPDTAVYAGDYLFVVCFKLLSHYASSLR---------SIQQDSGSMEKILKGELDQM 149 Query: 168 QDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + ++ Q KTG L +C GA + +S + G N+GI FQL Sbjct: 150 ATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYESGSSPTFAKNAEKIGMNIGIAFQLL 209 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 210 DDILDYTSD 218 >gi|47093810|ref|ZP_00231556.1| polyprenyl synthetase [Listeria monocytogenes str. 4b H7858] gi|254824998|ref|ZP_05229999.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-194] gi|254854153|ref|ZP_05243501.1| polyprenyl synthetase [Listeria monocytogenes FSL R2-503] gi|254991862|ref|ZP_05274052.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes FSL J2-064] gi|255519631|ref|ZP_05386868.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes FSL J1-175] gi|300763608|ref|ZP_07073606.1| polyprenyl synthetase [Listeria monocytogenes FSL N1-017] gi|47017807|gb|EAL08594.1| polyprenyl synthetase [Listeria monocytogenes str. 4b H7858] gi|258607545|gb|EEW20153.1| polyprenyl synthetase [Listeria monocytogenes FSL R2-503] gi|293594238|gb|EFG01999.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-194] gi|300515885|gb|EFK42934.1| polyprenyl synthetase [Listeria monocytogenes FSL N1-017] Length = 326 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPDYDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI ++ ++ +L G++ + Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + + KT L +C SGA + A++ + G LG+ FQ+ Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|319786423|ref|YP_004145898.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317464935|gb|ADV26667.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 335 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 11/188 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTAL---RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R LV + T ++ A IE IH +L+HDD+ +D +RRG+ Sbjct: 53 GGKRLRPMLVVLAGQATATSLGTTADHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRS 110 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T + + +++ G+ L + +F+++ +L Q++ T+ I +L Q+L Sbjct: 111 TANAIWGNAASVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLL 164 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +++ DE + + KT L GA+ + A + ++ L +G LG FQ+AD Sbjct: 165 HVRNPDTDEAAYLRVIERKTAVLFAAGTRLGALASCADADTQQALYDYGMALGYAFQIAD 224 Query: 226 DLLDCEED 233 D+LD D Sbjct: 225 DVLDYTAD 232 >gi|256396778|ref|YP_003118342.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928] gi|256363004|gb|ACU76501.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928] Length = 351 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 15/184 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + IE H +L HDD+ MD +RRG + + Sbjct: 68 GGKRTRPLLVLLAAQFGDAARAGVVEAAVVIELTHLATLYHDDV--MDEAALRRGVASAN 125 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++D AI++G+ L A ++S D +R Q + ++ GQ+ + Sbjct: 126 QRWDNSLAILSGDFLFARASTLLSELG---PDAVRIQAET-------FERLVSGQISESV 175 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + V + KTG+L+ A GA+ A + ++ L FGE G+ FQL+D Sbjct: 176 GPKNGQNPVDHHLEVLAGKTGSLIATAARFGAMFAGCTAEQERILADFGELFGVAFQLSD 235 Query: 226 DLLD 229 DLLD Sbjct: 236 DLLD 239 >gi|260878015|ref|ZP_05890370.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034] gi|260896382|ref|ZP_05904878.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466] gi|308085175|gb|EFO34870.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466] gi|308090006|gb|EFO39701.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034] gi|328471899|gb|EGF42776.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 10329] Length = 323 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L QLM S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELGSMKILQLM-SNAVNVIAEGEVQ-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A ++ + L+ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|268592839|ref|ZP_06127060.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131] gi|291311626|gb|EFE52079.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131] Length = 323 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + +V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAGRSLGYSGHKHTQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+A+A+ +++ L+ +G +G FQL DDLL Sbjct: 155 DPNITEENYMQVIYSKTARLFEAAAHASAILANATPEQEKALQDYGRYIGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|332299227|ref|YP_004441148.1| Trans-hexaprenyltranstransferase [Porphyromonas asaccharolytica DSM 20707] gi|332176290|gb|AEE11980.1| Trans-hexaprenyltranstransferase [Porphyromonas asaccharolytica DSM 20707] Length = 327 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 16/193 (8%) Query: 47 LLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 L GK IR +V CA L N T L IE +H SLIHDD+ +D RRG+ Sbjct: 44 LSSGKHIRPIIVGLCAQLCAGQTNEQT-LSAALVIELLHTASLIHDDV--IDWSDTRRGQ 100 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG- 162 PT++ Y A++ G+ +L+ AF E++S T ML + G +G Sbjct: 101 PTLNALYSNHQAVLMGDYVLSTAFLELVSREHTPE--------MLRVVAQAGRDLSIGEL 152 Query: 163 -QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 Q+ + E + + KTGAL + + GA+ A++ + +R G+ +G F Sbjct: 153 MQLSLSKAHTYREEDYYAVVDRKTGALFEASAKLGALSVDATEEQVKRCSRLGQLMGRAF 212 Query: 222 QLADDLLDCEEDL 234 QL DDL D + L Sbjct: 213 QLQDDLFDYDTAL 225 >gi|255038819|ref|YP_003089440.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053] gi|254951575|gb|ACT96275.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053] Length = 326 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 14/187 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R V A + + R GA IE +H +L+HDD+ +D+ RRG +V+ Sbjct: 48 GKQLRPMFVFLSAGVCGNISESTYRGGAMIELLHTATLVHDDV--VDDSNYRRGFFSVNA 105 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ LL+ ++S + K +L + + ++ + G++L I+ Sbjct: 106 LWKNKIAVLVGDYLLSRGL-LLSVDHEEFK-------ILKIV-STAVRELSEGELLQIEK 156 Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 I+E + I + KT +L+ C GA A++ +++ FGE +G+ FQ+ DD Sbjct: 157 ARRLDINEEVYYEIIRQKTASLIASCCAVGASSVGAAKEVVDKMHAFGEKVGMAFQIKDD 216 Query: 227 LLDCEED 233 L D ED Sbjct: 217 LFDYGED 223 >gi|323448818|gb|EGB04712.1| hypothetical protein AURANDRAFT_32168 [Aureococcus anophagefferens] Length = 320 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 20/192 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR---VGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGKKIR+ +V A F +LR + IE IH SL HDD+ +D +RRG Sbjct: 34 GGKKIRATMVLLTARAFRKGRGRSLRQRKLAEIIEIIHTASLFHDDV--IDGADVRRGCL 91 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 +V ++ + A++AG+ LL A ++ +L++ +L+ ++ ++ ++ G+++ Sbjct: 92 SVSAKFGDKIAVLAGDFLLARACVALA----KLENLAVVELI-----SVVIEHLVRGEIV 142 Query: 166 DIQDE-FIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ E +T + + KTG+LM AC + A++ +Q + +G ++G+ Sbjct: 143 QMRPESHSSDTHTLLEAYLHKSFYKTGSLMANACRAAALLEDETQANCDAAFAYGRHVGL 202 Query: 220 IFQLADDLLDCE 231 FQL DD LD E Sbjct: 203 AFQLVDDALDFE 214 >gi|229512636|ref|ZP_04402105.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] gi|229350313|gb|EEO15264.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] Length = 323 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84 H Q + L++ + + ++ GGK++R L A +H TA A IE IH Sbjct: 22 HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 78 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ Sbjct: 79 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 131 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++S N+ +G + Q+++ D E + KT L A + GAI+ AS Sbjct: 132 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 190 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G+ LG FQL DD++D D Sbjct: 191 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 219 >gi|28897101|ref|NP_796706.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD 2210633] gi|28805310|dbj|BAC58590.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD 2210633] Length = 333 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 53 GGKRLRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L QLM S N+ +G + Q+++ Sbjct: 111 AAFGNAASVLVGDFIYTRSFQMM----TELGSMKILQLM-SNAVNVIAEGEVQ-QLMNCN 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A ++ + L+ +G+ LG FQL DD++ Sbjct: 165 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVM 224 Query: 229 DCEED 233 D D Sbjct: 225 DYTSD 229 >gi|296268287|ref|YP_003650919.1| trans-hexaprenyltranstransferase [Thermobispora bispora DSM 43833] gi|296091074|gb|ADG87026.1| Trans-hexaprenyltranstransferase [Thermobispora bispora DSM 43833] Length = 331 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R+ LV A + + IE H +L HDD+ MD +RRG P+ + Sbjct: 53 GGKRFRAMLVLLAAQFGDPKAPAVVPGAVVIELTHLATLYHDDV--MDQAPMRRGLPSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 ++ + AI+ G+ L A EI++ + IR Q ++ GQ+ + Sbjct: 111 ARFGDTVAILTGDYLFAQASEILADLGAE---AIRVQART-------FSRLVRGQIRETI 160 Query: 168 -QDEFIDE-TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E +D T + KTG+L+ + GA+++ A + ++RL E +G+ +QL D Sbjct: 161 GPPEGMDPITHYLQVLADKTGSLIATSGRFGAMLSGAPREVEDRLAGACEAIGVAWQLGD 220 Query: 226 DLLDCEED 233 D++D D Sbjct: 221 DIIDVVSD 228 >gi|302504938|ref|XP_003014690.1| hypothetical protein ARB_07252 [Arthroderma benhamiae CBS 112371] gi|302660502|ref|XP_003021930.1| hypothetical protein TRV_03960 [Trichophyton verrucosum HKI 0517] gi|327306145|ref|XP_003237764.1| hexaprenyl pyrophosphate synthetase [Trichophyton rubrum CBS 118892] gi|291177996|gb|EFE33787.1| hypothetical protein ARB_07252 [Arthroderma benhamiae CBS 112371] gi|291185850|gb|EFE41312.1| hypothetical protein TRV_03960 [Trichophyton verrucosum HKI 0517] gi|326460762|gb|EGD86215.1| hexaprenyl pyrophosphate synthetase [Trichophyton rubrum CBS 118892] Length = 427 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++ + A++AG+ LL A I+ Sbjct: 169 RLAEITELIHTASLLHDDV--IDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIA- 225 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK--M 183 +L+D +L+ ++ N ++ G+ + +++ +DE+ + +QK + Sbjct: 226 ---RLRDPEVIELLGTVMAN-----LVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYL 277 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K+ +L+ +C + A++ + + E FG NLG+ FQL DD+LD Sbjct: 278 KSASLISKSCRAAALLNQSGPDVAEAAYLFGRNLGLAFQLVDDMLD 323 >gi|256960580|ref|ZP_05564751.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Merz96] gi|293384419|ref|ZP_06630300.1| polyprenyl synthetase [Enterococcus faecalis R712] gi|312906571|ref|ZP_07765571.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512] gi|256951076|gb|EEU67708.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Merz96] gi|291078267|gb|EFE15631.1| polyprenyl synthetase [Enterococcus faecalis R712] gi|310627219|gb|EFQ10502.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512] Length = 328 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 70 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 220 >gi|328468126|gb|EGF39132.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes 1816] Length = 302 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 22 GGKLLRPAFALLSAQAGPDYDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 79 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI + NI + +L G++ + Sbjct: 80 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIEFN-----SKNI--EKILMGELDQM 131 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + + KT L +C SGA + A++ + G LG+ FQ+ Sbjct: 132 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 191 Query: 225 DDLLD 229 DD+LD Sbjct: 192 DDVLD 196 >gi|326476521|gb|EGE00531.1| hexaprenyl pyrophosphate synthetase [Trichophyton tonsurans CBS 112818] gi|326484900|gb|EGE08910.1| hexaprenyl pyrophosphate synthetase Coq1 [Trichophyton equinum CBS 127.97] Length = 491 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++ + A++AG+ LL A I+ Sbjct: 233 RLAEITELIHTASLLHDDV--IDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIA- 289 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK--M 183 +L+D +L+ ++ N ++ G+ + +++ +DE+ + +QK + Sbjct: 290 ---RLRDPEVIELLGTVMAN-----LVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYL 341 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K+ +L+ +C + A++ + + E FG NLG+ FQL DD+LD Sbjct: 342 KSASLISKSCRAAALLNQSGPDVAEAAYLFGRNLGLAFQLVDDMLD 387 >gi|227517154|ref|ZP_03947203.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX0104] gi|229547906|ref|ZP_04436631.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 29200] gi|307288086|ref|ZP_07568100.1| polyprenyl synthetase [Enterococcus faecalis TX0109] gi|227075377|gb|EEI13340.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX0104] gi|229306927|gb|EEN72923.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 29200] gi|306500928|gb|EFM70244.1| polyprenyl synthetase [Enterococcus faecalis TX0109] Length = 328 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 70 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 220 >gi|120612320|ref|YP_971998.1| trans-hexaprenyltranstransferase [Acidovorax citrulli AAC00-1] gi|120590784|gb|ABM34224.1| Trans-hexaprenyltranstransferase [Acidovorax citrulli AAC00-1] Length = 344 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 8/183 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + + A IE IH +L+HDD+ +D +RRG+PT + Sbjct: 65 GGKRLRPALLLLMSGALGYQEAQRFNLAAVIEFIHTATLLHDDV--VDESTMRRGRPTAN 122 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ D++R +LS NI +G + Q+++ Sbjct: 123 ENFGNPASVLVGDFLHSRAFQMMVD-----ADDMRVMQILSEATNIIAEGEVQ-QLMNTH 176 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + KT L + A++A A +E +G+ LG FQ+ DD+L Sbjct: 177 DATLDEQGYLEVIRSKTAKLFEASARLAAVLARAPAAIEEACAEYGKALGTAFQVIDDVL 236 Query: 229 DCE 231 D + Sbjct: 237 DYD 239 >gi|183600352|ref|ZP_02961845.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827] gi|188020143|gb|EDU58183.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827] Length = 323 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + ++V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAGRSLGYSGQKHIQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPNITEENYMQVIYSKTARLFEAAAHASAILASATPEQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|220915526|ref|YP_002490830.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|219953380|gb|ACL63764.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 349 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 17/221 (7%) Query: 20 LDDLLLQTASHMQTQHND---RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 L + LL+ + + D +L +A R+ + GGK+IR + A+ Sbjct: 35 LPESLLELEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPY 94 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A E H +L+HDD+ +D+G +RRG+P + + ++++G+ LLT A EI+S+ Sbjct: 95 AVAAELTHSATLLHDDV--IDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSA-- 150 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKM-KTGALMCFA 192 + RS + L ++ ++ G++ L ++ F Q +M M KT +L +A Sbjct: 151 ----EPARSAALPPLLAT--MRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWA 204 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +GA A L FGE +G+ FQL DD LD D Sbjct: 205 AAAGAWAAGEVGEIPAALVRFGEGIGVAFQLVDDALDYAAD 245 >gi|116334218|ref|YP_795745.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC 367] gi|116099565|gb|ABJ64714.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC 367] Length = 325 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 18/224 (8%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77 T L D LL+T + ++L+ ++ GGK +R ++ N L+ GA Sbjct: 17 TALQDYLLRTVQLDNQPIHHKILALLKS---GGKLLRPGYFYLFSTFGNATTPAQLQAGA 73 Query: 78 A-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SS 133 A IE +H +LIHDD+ +D+ RRG T+ + Y + AI AG+ + T F+ + ++ Sbjct: 74 AAIEILHVGTLIHDDV--IDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLQSTT 131 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 ++ ++++I + + LQG L L+ +++ + + I KT L +C Sbjct: 132 DRSLIQNHIDAMRRI-------LQGELHQMDLNYREDITLDAYLNEIAG-KTAELFALSC 183 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 GA +A A Q+ + R G +G +Q+ DD+LD D PKK Sbjct: 184 YQGAQLAGAPQSVIDHTREIGIAIGCAYQMLDDILDYAGD-PKK 226 >gi|312883913|ref|ZP_07743630.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368371|gb|EFP95906.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC BAA-2122] Length = 323 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 10/202 (4%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 H Q + L++ + + ++ GGK++R L A A IE IH +L Sbjct: 22 HAQLNSDVTLINQLGFYIVSGGGKRVRPLLAIISAKALGYKGQGHTLSAAFIEFIHTATL 81 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ + Sbjct: 82 LHDDV--VDESDMRRGKATANSAFGNAASVLVGDYIYTRSFQMM----TELG-SMKILKL 134 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +S N+ +G + Q+++ D + E + KT L A + GA+++ A + Sbjct: 135 MSDAVNVIAEGEVQ-QLMNCNDPNVSEESYMQVIYSKTARLFEVATQVGAVLSEAPSEIE 193 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 L+ +G LG FQL DD++D Sbjct: 194 IALKNYGRYLGTAFQLIDDVMD 215 >gi|34499409|ref|NP_903624.1| bifunctional short chain isoprenyl diphosphate [Chromobacterium violaceum ATCC 12472] gi|34105261|gb|AAQ61616.1| Bifunctional short chain isoprenyl diphosphate [Chromobacterium violaceum ATCC 12472] Length = 338 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 21/231 (9%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG---------GKKIRSFLVTECASLFN 66 ID + L+TA + + ++ +L A++ A L GK +R FLV F Sbjct: 5 IDRLASRPYLETA--LGARLSEAMLQAVKDAWLDPYRSYHNRMGKMLRPFLVCSVMQAFE 62 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + V A E IH SL+ DD+ D+ +RRG PT H Q A AG+ L Sbjct: 63 RDPRRTPVVVAIAEIIHAASLVLDDV--ADDSPLRRGGPTAHRQVGVRVAGAAGSAWLNA 120 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183 F+++++ + L+ +L + + G+ G +D + +D T +Q + Sbjct: 121 CFQLLAADDSGLEPEQAQRLADEIAWEHWVTGV--GTTIDTTWPWMGRLDGTPAQYLQSV 178 Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 T + GAI A AS + + GE LGI FQ+ DD+L+ + Sbjct: 179 VHRSTSYTYRLPLKLGAIAAGASPQQTAQFAALGEELGIAFQIIDDILNVQ 229 >gi|86475810|dbj|BAE78987.1| Probable geranyl diphosphate synthase [Streptomyces sp. KO-3988] Length = 352 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 40/207 (19%) Query: 49 GGKKIR-SFLVTE-CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+IR +F +T A+ + + GAA+E +H +L+HDD+ +D+ RRG PT Sbjct: 60 GGKRIRPAFCITGYLAAGGDPAEPGIVAAGAALEMLHLSALVHDDV--LDDSSSRRGVPT 117 Query: 107 VHIQ----------------YDEVTAIIAGNGLLTYAFEIIS-SPKTQLKD--NIRSQLM 147 VH Q Y E AI+ G+ L Y+ E+++ +P+ L + +RS++M Sbjct: 118 VHTQAMALHESSGWQGEPRRYGEGVAILVGDLALVYSEELMAEAPRRVLPEWNKLRSEVM 177 Query: 148 LSLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKTGALMCF-ACESGAIMAHAS 203 + GQ +D+ EF +D +I ++K+G GA Sbjct: 178 I-------------GQYMDVHAAAEFSVDPRSSRLIARIKSGRYTIHRPLVVGAKRGRGR 224 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230 + L +GE +G FQL DDLLD Sbjct: 225 GDLAPALEEYGEAVGEAFQLRDDLLDA 251 >gi|85094730|ref|XP_959949.1| decaprenyl-diphosphate synthase subunit 1 [Neurospora crassa OR74A] gi|60389720|sp|Q7S565|COQ1_NEUCR RecName: Full=Probable hexaprenyl pyrophosphate synthase, mitochondrial; Short=HPS; Flags: Precursor gi|28921406|gb|EAA30713.1| decaprenyl-diphosphate synthase subunit 1 [Neurospora crassa OR74A] Length = 449 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG P+ ++++ A++AG+ LL A ++ Sbjct: 191 RLAEITELIHTASLLHDDV--IDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALA- 247 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183 +L+ +L+ ++ N ++ G+ + +++ ++ +ET + +QK + Sbjct: 248 ---RLRHAEVVELLATVIAN-----LVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYL 299 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ +C + A++ A + +G+NLG+ FQL DD+LD Sbjct: 300 KTASLISKSCRASALLGGADAATVDAAYLYGKNLGLAFQLVDDMLD 345 >gi|153802102|ref|ZP_01956688.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3] gi|124122346|gb|EAY41089.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3] Length = 348 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84 H Q + L++ + + ++ GGK++R L A +H TA A IE IH Sbjct: 47 HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 103 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ Sbjct: 104 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 156 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++S N+ +G + Q+++ D E + KT L A + GAI+ AS Sbjct: 157 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 215 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G+ LG FQL DD++D D Sbjct: 216 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 244 >gi|258623396|ref|ZP_05718400.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573] gi|258584362|gb|EEW09107.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573] Length = 348 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 10/206 (4%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 H Q + L++ + + ++ GGK++R L A + A IE IH +L Sbjct: 47 HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYHGSHHTTAAAFIEFIHTATL 106 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ + Sbjct: 107 LHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKL 159 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +S N+ +G + Q+++ D E + KT L A + GAI+ AS + Sbjct: 160 MSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVE 218 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 ++ +G+ LG FQL DD++D D Sbjct: 219 LAMQNYGKYLGTAFQLIDDVMDYTSD 244 >gi|255974147|ref|ZP_05424733.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T2] gi|256617997|ref|ZP_05474843.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 4200] gi|257083089|ref|ZP_05577450.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Fly1] gi|257417357|ref|ZP_05594351.1| trans-hexaprenyltranstransferase [Enterococcus faecalis AR01/DG] gi|257418078|ref|ZP_05595072.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T11] gi|300861510|ref|ZP_07107594.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11] gi|255967019|gb|EET97641.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T2] gi|256597524|gb|EEU16700.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 4200] gi|256991119|gb|EEU78421.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Fly1] gi|257159185|gb|EEU89145.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ARO1/DG] gi|257159906|gb|EEU89866.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T11] gi|300848971|gb|EFK76724.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11] gi|315144088|gb|EFT88104.1| polyprenyl synthetase [Enterococcus faecalis TX2141] Length = 328 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 70 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 220 >gi|206603458|gb|EDZ39938.1| Trans-hexaprenyltranstransferase [Leptospirillum sp. Group II '5-way CG'] Length = 330 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFL--VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R L + S ++ H++ L A +E IH +L+HDD+ +D+ +RRGK + Sbjct: 49 GGKRLRPLLMIIASRISGYSGPHISLL--SAVVEFIHTATLLHDDV--VDHAEMRRGKLS 104 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + + TA++ G+ L A + + ++ + ++ L+ +L + Sbjct: 105 ANQIWGNQTAVLVGDYLYATALWMATGVHNHEINDTLTLACRKMSEGEVLELILDNNLSA 164 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++++++ + + KT AL C GAI+ A +K+ L FG N+G+ FQ+ADD Sbjct: 165 REEDYLN------VVECKTAALTAGTCRIGAILGGADPEKKKSLEDFGYNIGMSFQIADD 218 Query: 227 LLD 229 LD Sbjct: 219 ALD 221 >gi|322367991|ref|ZP_08042560.1| farnesyl-pyrrophosphate synthase [Haladaptatus paucihalophilus DX253] gi|320552007|gb|EFW93652.1| farnesyl-pyrrophosphate synthase [Haladaptatus paucihalophilus DX253] Length = 276 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 15/216 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77 T+++D L + ++ + L+ AL GGK++R + + A+ G Sbjct: 5 TLVEDRLEEVVERVEPRELSEQLA--HTALSGGKRVRPTVAMLACEAAGGDAENAVDFGV 62 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 IE +H SL+ DD+ +D +RRG + +Y AIIA +G+L AFE+ SS Sbjct: 63 GIELVHDASLVVDDI--IDRSDVRRGTESAWAEYGYGRAIIASDGMLGEAFELFSSDPRA 120 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + ++ M+ L GM G+ ++ ++++ + + KTGAL A E GA Sbjct: 121 ME--VVAESMIEL-------GM--GEASELVATPSNQSEYMELARRKTGALFRAAAELGA 169 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I A A + + E +GI FQ+ DD+LD D Sbjct: 170 IAADADPETIDAFGEYAERVGIAFQIRDDVLDATAD 205 >gi|320036615|gb|EFW18554.1| hexaprenyl pyrophosphate synthetase [Coccidioides posadasii str. Silveira] Length = 472 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 14/171 (8%) Query: 66 NVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 +VN L + R A I E IH SL+HDD+ +DN RR + ++++ A++AG+ LL Sbjct: 205 DVNILPSQRRLAEITELIHTASLLHDDV--IDNAVTRRSVASANLEFGNKMAVLAGDFLL 262 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMI 180 A ++ +L+D ++L+ ++ N+ ++G QDE + ++ + + Sbjct: 263 GRASVALA----RLRDPEVTELLATVIANL-VEGEFMQLKNTAQDERNPAWTEDIIAYYL 317 Query: 181 QK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 QK +K+ +L+ +C + A++ + E +G NLG+ FQL DD+LD Sbjct: 318 QKTYLKSASLISKSCRAAALLGQTAPEVVEAAYTYGRNLGLAFQLVDDMLD 368 >gi|319949942|ref|ZP_08023938.1| polyprenyl synthetase [Dietzia cinnamea P4] gi|319436392|gb|EFV91516.1| polyprenyl synthetase [Dietzia cinnamea P4] Length = 344 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 15/186 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R + + +H ++ E IH +L HDD+ MD +RRG + Sbjct: 61 GGKRFRPIVTLLAGEIGPEPDHERLVKAAVVCEMIHLATLYHDDV--MDEASMRRGVESA 118 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + ++D TAI+AG+ L ++ +++ QL ++L+ G+ G Sbjct: 119 NSRWDNSTAILAGDFLFAHSSMLLADLGPAAVQLIAQTFAELVTGQMRETVGPGVGG--- 175 Query: 165 LDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 +DE D Q ++ + KTG+L+ A + G + A+ + RLR FG+ +GI FQ+ Sbjct: 176 ---RDE--DAAQHYLRVIWEKTGSLIAAAAQFGGEYSGATGEQIARLRRFGDAVGIAFQI 230 Query: 224 ADDLLD 229 ADD++D Sbjct: 231 ADDIID 236 >gi|256545799|ref|ZP_05473155.1| heptaprenyl diphosphate synthase component II [Anaerococcus vaginalis ATCC 51170] gi|256398495|gb|EEU12116.1| heptaprenyl diphosphate synthase component II [Anaerococcus vaginalis ATCC 51170] Length = 333 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/237 (29%), Positives = 120/237 (50%), Gaps = 19/237 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQT-----QHNDRLLSAIRYALLG-GKKIR 54 MN + L + SK+ TI+D L+ +T M+ + + +L + I L+ GK IR Sbjct: 1 MNFAISECLAKESKQ--TIIDYLIDKTLVEMREILGDYKQSQKLYNIIENTLISSGKMIR 58 Query: 55 SFLVTECASLFNVNHLTALRVG--AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112 + L+ SL N ++ + AA+E H SLIHDD+ +D+ IRR ++ +Y Sbjct: 59 TKLLI-YISLMGENQISDKIISQCAAVEITHLASLIHDDI--IDDSLIRRSHRSIQSKYG 115 Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172 + A+ AG+ +++ F ++ K L + I ++S T G +G ++ + + I Sbjct: 116 KDVAVFAGDYMISKVFSYLA--KKGLVEEIS---IISDTIRDMCNGEVGQNLIKYRLD-I 169 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 E + F KT + C GA A +Q + ++ FG+NLG++FQL DD+LD Sbjct: 170 SEKEYFENICGKTASFFKTVCYFGAKNAGFNQIDINKMVEFGKNLGLMFQLKDDILD 226 >gi|220936362|ref|YP_002515261.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] gi|219997672|gb|ACL74274.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 322 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLSARACGAGDRRHIDLAAIIEFIHTATLLHDDV--VDASELRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ + +R +L+ T N +G + Q+L+ Sbjct: 101 ALFGNEASVLVGDFLYSRSFEMMVEIGS-----MRVMEILAHTTNTIAEGEVL-QLLNCH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + + KT L A GA++ ++ ++ + +G +LG FQL DD+L Sbjct: 155 DADTPEERYMEVIQSKTAKLFEAAARIGAVLGGQPESVEQAMAAYGMHLGTAFQLIDDVL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|237716862|ref|ZP_04547343.1| octaprenyl-diphosphate synthase [Bacteroides sp. D1] gi|262405631|ref|ZP_06082181.1| heptaprenyl diphosphate synthase component II protein [Bacteroides sp. 2_1_22] gi|294644424|ref|ZP_06722187.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a] gi|294810418|ref|ZP_06769075.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b] gi|298484258|ref|ZP_07002422.1| polyprenyl synthetase [Bacteroides sp. D22] gi|229442845|gb|EEO48636.1| octaprenyl-diphosphate synthase [Bacteroides sp. D1] gi|262356506|gb|EEZ05596.1| heptaprenyl diphosphate synthase component II protein [Bacteroides sp. 2_1_22] gi|292640259|gb|EFF58514.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a] gi|294442383|gb|EFG11193.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b] gi|295085933|emb|CBK67456.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens XB1A] gi|298269583|gb|EFI11180.1| polyprenyl synthetase [Bacteroides sp. D22] Length = 324 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 14/183 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A L+ + L ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILVLLVARLYGAVCPSTLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166 ++ A++ G+ LL A ++ + T S ++ L +G Q + G++L + Sbjct: 103 IFNNKVAVLTGDYLL--ATSLVHAELTN------SHRIIQLVSTLG-QDLADGELLQLSN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + E F + + KT AL ++ A + E E R GE +GI FQ+ DD Sbjct: 154 VSNHSFSEEVYFDVIRKKTAALFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDD 213 Query: 227 LLD 229 + D Sbjct: 214 IFD 216 >gi|229547329|ref|ZP_04436054.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX1322] gi|255970563|ref|ZP_05421149.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T1] gi|256958518|ref|ZP_05562689.1| trans-hexaprenyltranstransferase [Enterococcus faecalis DS5] gi|256963076|ref|ZP_05567247.1| trans-hexaprenyltranstransferase [Enterococcus faecalis HIP11704] gi|257088406|ref|ZP_05582767.1| trans-hexaprenyltranstransferase [Enterococcus faecalis D6] gi|257420312|ref|ZP_05597302.1| trans-hexaprenyltranstransferase [Enterococcus faecalis X98] gi|294780744|ref|ZP_06746104.1| polyprenyl synthetase [Enterococcus faecalis PC1.1] gi|312953761|ref|ZP_07772592.1| polyprenyl synthetase [Enterococcus faecalis TX0102] gi|229307568|gb|EEN73555.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis TX1322] gi|255961581|gb|EET94057.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T1] gi|256949014|gb|EEU65646.1| trans-hexaprenyltranstransferase [Enterococcus faecalis DS5] gi|256953572|gb|EEU70204.1| trans-hexaprenyltranstransferase [Enterococcus faecalis HIP11704] gi|256996436|gb|EEU83738.1| trans-hexaprenyltranstransferase [Enterococcus faecalis D6] gi|257162136|gb|EEU92096.1| trans-hexaprenyltranstransferase [Enterococcus faecalis X98] gi|294452184|gb|EFG20626.1| polyprenyl synthetase [Enterococcus faecalis PC1.1] gi|310628321|gb|EFQ11604.1| polyprenyl synthetase [Enterococcus faecalis TX0102] gi|315033018|gb|EFT44950.1| polyprenyl synthetase [Enterococcus faecalis TX0017] gi|315035236|gb|EFT47168.1| polyprenyl synthetase [Enterococcus faecalis TX0027] gi|315152723|gb|EFT96739.1| polyprenyl synthetase [Enterococcus faecalis TX0031] gi|315171248|gb|EFU15265.1| polyprenyl synthetase [Enterococcus faecalis TX1342] gi|323479172|gb|ADX78611.1| polyprenyl synthetase family protein [Enterococcus faecalis 62] gi|327536366|gb|AEA95200.1| trans-hexaprenyltranstransferase [Enterococcus faecalis OG1RF] Length = 328 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 70 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 220 >gi|229525127|ref|ZP_04414532.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|229338708|gb|EEO03725.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|327483290|gb|AEA77697.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4] Length = 323 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84 H Q + L++ + + ++ GGK++R L A +H TA A IE IH Sbjct: 22 HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 78 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ Sbjct: 79 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 131 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++S N+ +G + Q+++ D E + KT L A + GAI+ AS Sbjct: 132 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 190 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G+ LG FQL DD++D D Sbjct: 191 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 219 >gi|297580574|ref|ZP_06942500.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385] gi|297534990|gb|EFH73825.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385] Length = 348 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84 H Q + L++ + + ++ GGK++R L A +H TA A IE IH Sbjct: 47 HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 103 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ Sbjct: 104 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 156 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++S N+ +G + Q+++ D E + KT L A + GAI+ AS Sbjct: 157 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 215 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G+ LG FQL DD++D D Sbjct: 216 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 244 >gi|296140358|ref|YP_003647601.1| polyprenyl synthetase [Tsukamurella paurometabola DSM 20162] gi|296028492|gb|ADG79262.1| Polyprenyl synthetase [Tsukamurella paurometabola DSM 20162] Length = 362 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 41/215 (19%) Query: 44 RYALLGGKKIR------SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 R+ L GGK+IR +L A+ +V ALR +A+E + +LIHDD+ +D Sbjct: 50 RFVLRGGKRIRPAFAWTGWLAGGGATDGDVAR-AALRACSALEFVQACALIHDDI--IDA 106 Query: 98 GYIRRGKPTVHIQY----------------DEVTAIIAGNGLLTYAFEIIS----SPKTQ 137 RRG PT H ++ E TAI+ G+ L +A ++ SP+ Sbjct: 107 SQTRRGYPTTHREFAELHAQRGWSGSSEKFGEATAILLGDLALAWADDMFLGAGLSPERY 166 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFM--IQKMKT-GALMCFAC 193 L+ M + +LGGQ+LDI E DE+Q + + KT G + Sbjct: 167 LRAARAWAAMRTE--------VLGGQLLDIVSEASRDESQAAAERVVRFKTAGYTVERPL 218 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A AS LR G +LG+ FQL DDLL Sbjct: 219 HVGAALAGASDQAITALRAIGVDLGVAFQLRDDLL 253 >gi|163749221|ref|ZP_02156471.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99] gi|161331291|gb|EDQ02180.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99] Length = 323 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + L++ A +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPLLSILAARAIDYQGVAHLKLAAIVEFIHTASLLHDDV--VDESMLRRGRDTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L +++ ML+ N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELG-SMKVLKMLADATNVLAEGEV-LQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A + + L +G+ LG FQL DDLL Sbjct: 155 DPDTSEESYMRVIYCKTAKLFEAATRLAGVLADSPIEIQTALADYGKYLGTAFQLTDDLL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|119192214|ref|XP_001246713.1| hypothetical protein CIMG_00484 [Coccidioides immitis RS] Length = 472 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 14/171 (8%) Query: 66 NVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 +VN L + R A I E IH SL+HDD+ +DN RR + ++++ A++AG+ LL Sbjct: 205 DVNILPSQRRLAEITELIHTASLLHDDV--IDNAVTRRSVASANLEFGNKMAVLAGDFLL 262 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMI 180 A ++ +L+D ++L+ ++ N+ ++G QDE + ++ + + Sbjct: 263 GRASVALA----RLRDPEVTELLATVIANL-VEGEFMQLKNTAQDERNPAWTEDIIAYYL 317 Query: 181 QK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 QK +K+ +L+ +C + A++ + E +G NLG+ FQL DD+LD Sbjct: 318 QKTYLKSASLISKSCRAAALLGQTAPEVVEAAYTYGRNLGLAFQLVDDMLD 368 >gi|114048617|ref|YP_739167.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-7] gi|113890059|gb|ABI44110.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-7] Length = 331 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L D++R +L+ T N+ +G + Q+++ Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSMRVLRVLADTTNVLAEGEVL-QLMNCN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++A A+ ++ L +G+ LG FQL DDLL Sbjct: 163 DPNTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEQETALGDYGKYLGTAFQLTDDLL 222 Query: 229 DCEED 233 D D Sbjct: 223 DYTAD 227 >gi|262172465|ref|ZP_06040143.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] gi|261893541|gb|EEY39527.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] Length = 323 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84 H Q + L++ + + ++ GGK++R L A +H TA A IE IH Sbjct: 22 HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 78 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ Sbjct: 79 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 131 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++S N+ +G + Q+++ D E + KT L A + GAI+ AS Sbjct: 132 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 190 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G+ LG FQL DD++D D Sbjct: 191 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 219 >gi|224499314|ref|ZP_03667663.1| polyprenyl synthetase [Listeria monocytogenes Finland 1988] Length = 326 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI ++ ++ +L G++ + Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + + KT L +C SGA + A++ + G LG+ FQ+ Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|34762284|ref|ZP_00143289.1| Farnesyl pyrophosphate synthetase; Geranyltranstransferase; Farnesyltransferase; Heptaprenyl diphosphate synthase component II [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|256846036|ref|ZP_05551494.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 3_1_36A2] gi|27888070|gb|EAA25132.1| Farnesyl pyrophosphate synthetase; Geranyltranstransferase; Farnesyltransferase; Heptaprenyl diphosphate synthase component II [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|256719595|gb|EEU33150.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 3_1_36A2] Length = 326 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 11/185 (5%) Query: 48 LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 L GK +RS L+ CA L + N ++ A +E H SLIHDD+ +D+ RRGK Sbjct: 40 LSGKMLRSKLLLLCAFLGSNWKDNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 ++ +Y + A+ AG+ L+ F L + + +LS T G + + Sbjct: 98 VSIQGKYGKDAAVFAGDFLIARIF--YYGAMENLNETVS---ILSKTVEYMCIGEIEQDL 152 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q++ I E + F + KT AL A GA S+ ++L+ F +NLG++FQL Sbjct: 153 CRYQED-ISEKKYFENIERKTAALFQAASYIGAKETGCSEEIIQKLKLFVKNLGLMFQLK 211 Query: 225 DDLLD 229 DD+LD Sbjct: 212 DDILD 216 >gi|29377703|ref|NP_816857.1| heptaprenyl diphosphate synthase, component II, putative [Enterococcus faecalis V583] gi|256854910|ref|ZP_05560274.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T8] gi|257080330|ref|ZP_05574691.1| trans-hexaprenyltranstransferase [Enterococcus faecalis E1Sol] gi|257091474|ref|ZP_05585835.1| trans-hexaprenyltranstransferase [Enterococcus faecalis CH188] gi|307274532|ref|ZP_07555713.1| polyprenyl synthetase [Enterococcus faecalis TX2134] gi|29345171|gb|AAO82927.1| heptaprenyl diphosphate synthase, component II, putative [Enterococcus faecalis V583] gi|256710470|gb|EEU25514.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T8] gi|256988360|gb|EEU75662.1| trans-hexaprenyltranstransferase [Enterococcus faecalis E1Sol] gi|257000286|gb|EEU86806.1| trans-hexaprenyltranstransferase [Enterococcus faecalis CH188] gi|306508804|gb|EFM77893.1| polyprenyl synthetase [Enterococcus faecalis TX2134] gi|315580811|gb|EFU93002.1| polyprenyl synthetase [Enterococcus faecalis TX0309A] Length = 328 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 70 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 220 >gi|229507073|ref|ZP_04396579.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|229508772|ref|ZP_04398264.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229519759|ref|ZP_04409202.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229519996|ref|ZP_04409425.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] gi|229530278|ref|ZP_04419666.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] gi|229606271|ref|YP_002876919.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|255743817|ref|ZP_05417774.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262167602|ref|ZP_06035306.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] gi|229332051|gb|EEN97539.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] gi|229342945|gb|EEO07934.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] gi|229344448|gb|EEO09423.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229354175|gb|EEO19106.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229355818|gb|EEO20738.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|229368926|gb|ACQ59349.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|255738566|gb|EET93954.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262023938|gb|EEY42635.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] Length = 323 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84 H Q + L++ + + ++ GGK++R L A +H TA A IE IH Sbjct: 22 HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 78 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ Sbjct: 79 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 131 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++S N+ +G + Q+++ D E + KT L A + GAI+ AS Sbjct: 132 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 190 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G+ LG FQL DD++D D Sbjct: 191 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 219 >gi|217966160|ref|YP_002351838.1| polyprenyl synthetase [Listeria monocytogenes HCC23] gi|217335430|gb|ACK41224.1| polyprenyl synthetase [Listeria monocytogenes HCC23] gi|307572230|emb|CAR85409.1| polyprenyl synthase, component II [Listeria monocytogenes L99] Length = 326 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI ++ ++ +L G++ + Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + + KT L +C SGA + A++ + G LG+ FQ+ Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|258627044|ref|ZP_05721842.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603] gi|258580718|gb|EEW05669.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603] Length = 348 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 10/206 (4%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 H Q + L++ + + ++ GGK++R L A + A IE IH +L Sbjct: 47 HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYHGSHHTTAAAFIEFIHTATL 106 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ + Sbjct: 107 LHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TEL-GSMKILKL 159 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +S N+ +G + Q+++ D E + KT L A + GAI+ AS + Sbjct: 160 MSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVE 218 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 ++ +G+ LG FQL DD++D D Sbjct: 219 LAMQNYGKYLGTAFQLIDDVMDYTSD 244 >gi|290891826|ref|ZP_06554823.1| polyprenyl synthetase [Listeria monocytogenes FSL J2-071] gi|290558420|gb|EFD91937.1| polyprenyl synthetase [Listeria monocytogenes FSL J2-071] Length = 326 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI ++ ++ +L G++ + Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + + KT L +C SGA + A++ + G LG+ FQ+ Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|219871055|ref|YP_002475430.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165] gi|219691259|gb|ACL32482.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165] Length = 327 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLIAVLAANTVGYKGQEHITCAAFVEFIHTATLLHDDV--VDESDMRRGRETAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++S + + ++S N+ +G + Q++++ Sbjct: 105 ARFGNAASVLVGDFIYTRAFQMMASLCS-----LDVLQVMSDATNVIAEGEVQ-QLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + KT L A + AI++ A Q +R +G LG FQL DD+L Sbjct: 159 NPETTEANYMQVIYSKTARLFEAASQCSAIVSGADQATVIAMRDYGRYLGTAFQLVDDIL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|323493611|ref|ZP_08098732.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546] gi|323312134|gb|EGA65277.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546] Length = 323 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 10/206 (4%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 H Q + L++ + + ++ GGK+IR L A A IE IH +L Sbjct: 22 HAQLNSDVSLINQLGFYIVSGGGKRIRPLLAVLSARALGYQGEAHTTAAAFIEFIHTATL 81 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ + Sbjct: 82 LHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SLKILKL 134 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +S N+ +G + Q+++ D E + KT L A + GAI+ A + Sbjct: 135 MSDAVNVIAEGEVQ-QLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGAILNEAPAEVE 193 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L+ +G+ LG FQL DD++D D Sbjct: 194 LALQNYGKYLGTAFQLIDDVMDYTSD 219 >gi|289641413|ref|ZP_06473577.1| Trans-hexaprenyltranstransferase [Frankia symbiont of Datisca glomerata] gi|289508749|gb|EFD29684.1| Trans-hexaprenyltranstransferase [Frankia symbiont of Datisca glomerata] Length = 333 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 19/190 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R +V A + + L AIE H +L HDD+ MD +RRG + + Sbjct: 54 GGKRFRPMVVLLAAHFGDPEAIGVLPAAVAIELTHLSTLYHDDV--MDEAPLRRGAASAN 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQM 164 +++ AI+ G+ L A +I + P+ L I + + +G L GQ Sbjct: 112 VRWTNTIAILTGDFLFARASDITADLGPEATRILARTIATLCEGQIRETVG---SLPGQ- 167 Query: 165 LDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D + ++ + + KT +L+ + GA++A A + L FG+ G+ FQL Sbjct: 168 --------DPVEHYLRVIREKTASLIATSGRLGAMLAGADLITVDALAAFGDYFGVAFQL 219 Query: 224 ADDLLDCEED 233 +DDL+D D Sbjct: 220 SDDLIDVASD 229 >gi|303313007|ref|XP_003066515.1| Decaprenyl-diphosphate synthase , putative [Coccidioides posadasii C735 delta SOWgp] gi|240106177|gb|EER24370.1| Decaprenyl-diphosphate synthase , putative [Coccidioides posadasii C735 delta SOWgp] Length = 472 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 14/171 (8%) Query: 66 NVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 +VN L + R A I E IH SL+HDD+ +DN RR + ++++ A++AG+ LL Sbjct: 205 DVNILPSQRRLAEITELIHTASLLHDDV--IDNAVTRRSVASANLEFGNKMAVLAGDFLL 262 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMI 180 A ++ +L+D ++L+ ++ N+ ++G QDE + ++ + + Sbjct: 263 GRASVALA----RLRDPEVTELLATVIANL-VEGEFMQLKNTAQDERNPAWTEDIIAYYL 317 Query: 181 QK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 QK +K+ +L+ +C + A++ + E +G NLG+ FQL DD+LD Sbjct: 318 QKTYLKSASLISKSCRAAALLGQTAPEVVEAAYTYGRNLGLAFQLVDDMLD 368 >gi|183985063|ref|YP_001853354.1| multifunctional geranylgeranyl pyrophosphate synthetase IdsA1 [Mycobacterium marinum M] gi|183178389|gb|ACC43499.1| multifunctional geranylgeranyl pyrophosphate synthetase IdsA1 [Mycobacterium marinum M] Length = 346 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 25/218 (11%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75 ID + +L L H+ D S++R+ GK +R L CA A+ Sbjct: 38 IDNLSPELRLCAGFHIGWWEPDGRDSSVRH----GKAVRPALSITCARAAGGAMDAAIPA 93 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E +H SL+HDD+ MD RR +P + Y AI+ G+ LL A +++ Sbjct: 94 AVAVELVHDCSLLHDDI--MDGDVTRRHRPAAWVVYGVPMAILTGDALLVLALDLVHEGA 151 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMC 190 + S L+ + GQ D+ F T+V++ + + KTGAL Sbjct: 152 SG-----------SALRKAALE-LCAGQSADLA--FEQRTKVWLPECLQMAQQKTGALFG 197 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 AC+ GA+ A A ++ FG +LG+ FQL DD+L Sbjct: 198 VACQLGALAAGADSLVADQYAQFGRHLGLSFQLVDDIL 235 >gi|197120826|ref|YP_002132777.1| polyprenyl synthetase [Anaeromyxobacter sp. K] gi|196170675|gb|ACG71648.1| Polyprenyl synthetase [Anaeromyxobacter sp. K] Length = 349 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 17/221 (7%) Query: 20 LDDLLLQTASHMQTQHND---RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 L + LL+ + + D +L +A R+ + GGK+IR + A+ Sbjct: 35 LPESLLELEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPY 94 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A E H +L+HDD+ +D+G +RRG+P + + ++++G+ LLT A EI+S+ Sbjct: 95 AVAAELTHSATLLHDDV--IDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSA-- 150 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKM-KTGALMCFA 192 + RS + L ++ ++ G++ L ++ F Q +M M KT +L +A Sbjct: 151 ----EPARSAALPPLLAT--MRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWA 204 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +GA A L FGE +G+ FQL DD LD D Sbjct: 205 AAAGAWAAGEVGEIPAALVRFGEGIGVAFQLVDDALDYAAD 245 >gi|117921658|ref|YP_870850.1| polyprenyl synthetase [Shewanella sp. ANA-3] gi|117613990|gb|ABK49444.1| Polyprenyl synthetase [Shewanella sp. ANA-3] Length = 331 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L D++R +L+ T N+ +G + Q+++ Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSMRVLRVLADTTNVLAEGEVL-QLMNCN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++A A+ ++ L +G+ LG FQL DDLL Sbjct: 163 DPNTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEQEAALGDYGKYLGTAFQLTDDLL 222 Query: 229 DCEED 233 D D Sbjct: 223 DYTAD 227 >gi|15640461|ref|NP_230088.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590773|ref|ZP_01678102.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80] gi|121727265|ref|ZP_01680424.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52] gi|147674613|ref|YP_001218702.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395] gi|153819559|ref|ZP_01972226.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457] gi|153822596|ref|ZP_01975263.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33] gi|153830825|ref|ZP_01983492.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39] gi|227080645|ref|YP_002809196.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2] gi|254850665|ref|ZP_05240015.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10] gi|298501034|ref|ZP_07010835.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757] gi|9654858|gb|AAF93607.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547375|gb|EAX57489.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80] gi|121630384|gb|EAX62779.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52] gi|126509895|gb|EAZ72489.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457] gi|126519900|gb|EAZ77123.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33] gi|146316496|gb|ABQ21035.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395] gi|148873684|gb|EDL71819.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39] gi|227008533|gb|ACP04745.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2] gi|227012288|gb|ACP08498.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395] gi|254846370|gb|EET24784.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10] gi|297540282|gb|EFH76342.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757] Length = 348 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84 H Q + L++ + + ++ GGK++R L A +H TA A IE IH Sbjct: 47 HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 103 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ Sbjct: 104 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 156 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++S N+ +G + Q+++ D E + KT L A + GAI+ AS Sbjct: 157 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 215 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G+ LG FQL DD++D D Sbjct: 216 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 244 >gi|47097124|ref|ZP_00234692.1| polyprenyl synthetase [Listeria monocytogenes str. 1/2a F6854] gi|254830926|ref|ZP_05235581.1| hypothetical protein Lmon1_06179 [Listeria monocytogenes 10403S] gi|254899908|ref|ZP_05259832.1| hypothetical protein LmonJ_08841 [Listeria monocytogenes J0161] gi|254912886|ref|ZP_05262898.1| polyprenyl synthetase [Listeria monocytogenes J2818] gi|254937267|ref|ZP_05268964.1| polyprenyl synthetase [Listeria monocytogenes F6900] gi|47014491|gb|EAL05456.1| polyprenyl synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258609873|gb|EEW22481.1| polyprenyl synthetase [Listeria monocytogenes F6900] gi|293590886|gb|EFF99220.1| polyprenyl synthetase [Listeria monocytogenes J2818] Length = 326 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI ++ ++ +L G++ + Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + + KT L +C SGA + A++ + G LG+ FQ+ Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|295114543|emb|CBL33180.1| Geranylgeranyl pyrophosphate synthase [Enterococcus sp. 7L76] Length = 323 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 65 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 122 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 123 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 171 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 172 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 215 >gi|194364794|ref|YP_002027404.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3] gi|194347598|gb|ACF50721.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3] Length = 332 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV ++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPMLVMLAGRAVGNVGPEHHQLAAIIEFIHTSTLLHDDV--VDESSLRRGRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +L+ Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELERMSVMQILADATNRIAEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L GA+ + + ++ L +G +LG FQ+ADD+L Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDYGMHLGYAFQIADDVL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|315181275|gb|ADT88189.1| octaprenyl-diphosphate synthase [Vibrio furnissii NCTC 11218] Length = 396 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 12/224 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNVNH 69 K I T+ + + + +Q Q N L++ + + ++ GGK++R L A Sbjct: 77 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAVLSAKALGYQG 136 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A IE H +L+HDD+ +D +RRGK T + + +++ G+ + T +F+ Sbjct: 137 QGHTLAAAFIEFTHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQ 194 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++ +L QLM S N+ +G + Q+++ D E + KT L Sbjct: 195 MM----VELGSMKILQLM-SEAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLF 248 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GAI+A AS + L+ +G+ LG FQL DD++D D Sbjct: 249 EAATQIGAILADASPEIETALQNYGKYLGTAFQLIDDVMDYTAD 292 >gi|261378364|ref|ZP_05982937.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685] gi|269145472|gb|EEZ71890.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685] Length = 324 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + ++ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGRSVGYDNEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AF+++ + +R +++ NI +G + Q+++I Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + + + KT L A + G+I+ +A ++ L+ +G +G FQ+ DD+L Sbjct: 157 NTDITEEEYIQVIQYKTAKLFEAAAQVGSILGNAPPECEQALKDYGMYVGTAFQIIDDVL 216 Query: 229 D 229 D Sbjct: 217 D 217 >gi|254225991|ref|ZP_04919591.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51] gi|254291338|ref|ZP_04962132.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226] gi|125621447|gb|EAZ49781.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51] gi|150422794|gb|EDN14747.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226] Length = 348 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84 H Q + L++ + + ++ GGK++R L A +H TA A IE IH Sbjct: 47 HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 103 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ Sbjct: 104 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 156 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++S N+ +G + Q+++ D E + KT L A + GAI+ AS Sbjct: 157 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 215 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G+ LG FQL DD++D D Sbjct: 216 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 244 >gi|86156806|ref|YP_463591.1| farnesyltranstransferase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773317|gb|ABC80154.1| Farnesyltranstransferase [Anaeromyxobacter dehalogenans 2CP-C] Length = 349 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 17/221 (7%) Query: 20 LDDLLLQTASHMQTQHND---RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 L + LL+ + + D +L +A R+ + GGK+IR + A+ Sbjct: 35 LPESLLELEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPY 94 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A E H +L+HDD+ +D+G +RRG+P + + ++++G+ LLT A EI+S+ Sbjct: 95 AVAAELTHSATLLHDDV--IDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSA-- 150 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKM-KTGALMCFA 192 + RS + L ++ ++ G++ L ++ F Q +M M KT +L +A Sbjct: 151 ----EPARSAALPPLLAT--MRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWA 204 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +GA A L FGE +G+ FQL DD LD D Sbjct: 205 AAAGAWAAGEVGEIPAALVRFGEGIGVAFQLVDDALDYAAD 245 >gi|71066129|ref|YP_264856.1| octaprenyl-diphosphate synthase [Psychrobacter arcticus 273-4] gi|71039114|gb|AAZ19422.1| probable octaprenyl-diphosphate synthase [Psychrobacter arcticus 273-4] Length = 349 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + CA +FN A+ + A E +H +L+HDD+ +D RRGK T Sbjct: 67 GGKRMRPLITLLCARMFNDEPSQQAMHLAAITEMLHTATLVHDDV--IDESGQRRGKATA 124 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + +D TA++ G+ L+ AF ++ ++ L L + G + G++L + Sbjct: 125 NATWDNATAVLVGDYLIARAFNLLVGFQS---------LPLLQVFSDGTCDIAEGEVLQL 175 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q + E I KT L A + AI+ Q+ + L FG++ G FQ+ Sbjct: 176 QHQHNPEATEQDYLNIIDGKTSRLFMMATQGAAILQGQIQH-LQALADFGQHFGNAFQII 234 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 235 DDVLDYSGD 243 >gi|291514908|emb|CBK64118.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301] Length = 329 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 26/209 (12%) Query: 33 TQHNDRLLSAIRYALLG-GKKIRSFLVTECASL-FNVNHLTALR----VGAAIECIHCYS 86 T + L +RYAL GK IR LV A++ V A R +E IH S Sbjct: 27 TAEGELLSDMLRYALSARGKGIRPMLVMLSAAMNAPVKGAAAGRRACLAAMLVEMIHVAS 86 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 LIHDD+ +D +RRGKP+ + ++ A+I G+ +L I ++S Sbjct: 87 LIHDDV--IDEADMRRGKPSANARWQSHKAVILGDYILAKNMNI----------GLQSGQ 134 Query: 147 MLSLTHNIG-LQGMLGGQMLDIQDEFIDET----QVFM-IQKMKTGALMCFACESGAIMA 200 +TH G + + G++L QDE + Q ++ I KT +L+ + +GA+ Sbjct: 135 FDLVTHVCGSMAALCEGEVL--QDECAANSTMTRQAYLDIIYKKTASLLGVSASAGALAV 192 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229 A+++ +R FGE +G+ FQ+ DD+LD Sbjct: 193 GATRDRVATMRRFGEAVGMAFQIQDDILD 221 >gi|163802656|ref|ZP_02196547.1| malate dehydrogenase [Vibrio sp. AND4] gi|159173544|gb|EDP58364.1| malate dehydrogenase [Vibrio sp. AND4] Length = 323 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSARALGYHGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L +I+ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELG-SIKILKLMSDAVNVIAEGEVQ-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + KT L A + GAI+ A +N + L+ +G+ LG FQL DD++ Sbjct: 155 NPDTTEENYMQVIYSKTARLFESATQIGAILNDAPENVEVALQNYGKFLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|16804679|ref|NP_466164.1| hypothetical protein lmo2641 [Listeria monocytogenes EGD-e] gi|224503563|ref|ZP_03671870.1| hypothetical protein LmonFR_13848 [Listeria monocytogenes FSL R2-561] gi|254829090|ref|ZP_05233777.1| polyprenyl synthetase [Listeria monocytogenes FSL N3-165] gi|255025739|ref|ZP_05297725.1| hypothetical protein LmonocytFSL_04305 [Listeria monocytogenes FSL J2-003] gi|284800473|ref|YP_003412338.1| hypothetical protein LM5578_0219 [Listeria monocytogenes 08-5578] gi|284993659|ref|YP_003415427.1| hypothetical protein LM5923_0219 [Listeria monocytogenes 08-5923] gi|16412129|emb|CAD00719.1| lmo2641 [Listeria monocytogenes EGD-e] gi|258601501|gb|EEW14826.1| polyprenyl synthetase [Listeria monocytogenes FSL N3-165] gi|284056035|gb|ADB66976.1| hypothetical protein LM5578_0219 [Listeria monocytogenes 08-5578] gi|284059126|gb|ADB70065.1| hypothetical protein LM5923_0219 [Listeria monocytogenes 08-5923] Length = 326 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI ++ ++ +L G++ + Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + + KT L +C SGA + A++ + G LG+ FQ+ Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|251793088|ref|YP_003007814.1| octaprenyl-diphosphate synthase [Aggregatibacter aphrophilus NJ8700] gi|247534481|gb|ACS97727.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Aggregatibacter aphrophilus NJ8700] Length = 323 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A A+ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRIRPLIAVLAARALGFEGPQAITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL+ ++M T N+ +G + Q++++ Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVA----QLESLKILRIMADAT-NVLAEGEVQ-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A +++ +++ L+ +G LG FQL DD+L Sbjct: 155 DPQTSEENYMRVIYSKTARLFEVAAQAAAIIAGSNEAQEQALQSYGRYLGTAFQLVDDVL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|213964989|ref|ZP_03393188.1| bifunctional short chain isoprenyl diphosphate synthase [Corynebacterium amycolatum SK46] gi|213952525|gb|EEB63908.1| bifunctional short chain isoprenyl diphosphate synthase [Corynebacterium amycolatum SK46] Length = 351 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 22/192 (11%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRG 103 A GGK+ R + T A+ F + + AA +E H +L HDD+ MD RRG Sbjct: 66 AQAGGKRFRP-MFTMLAAQFGETPESDKVITAATVLELTHLATLYHDDV--MDEADKRRG 122 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 P+ + ++D AI+AG+ Y F + S +L + S+ + G+ ++ GQ Sbjct: 123 VPSANSRWDNTVAILAGD----YLFAVAS----RLLAELGSESVAHFAETFGV--LVTGQ 172 Query: 164 M------LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 M LD+ E E + +I + KTG L+ A GA A AS + LR +GE + Sbjct: 173 MRECLNDLDLPIEERIERYLKVIAE-KTGVLIASAGYLGAYHAGASADISNALRRYGELI 231 Query: 218 GIIFQLADDLLD 229 GI+FQ+ DD++D Sbjct: 232 GIVFQIVDDIID 243 >gi|88803606|ref|ZP_01119131.1| polyprenyl synthetase [Polaribacter irgensii 23-P] gi|88780618|gb|EAR11798.1| polyprenyl synthetase [Polaribacter irgensii 23-P] Length = 325 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 38/208 (18%) Query: 39 LLSAIRYALL--GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 LL+ I Y ++ GK++R FLV + S + T R A +E IH +L+HDD+ Sbjct: 32 LLNRITYYIVRRKGKQMRPMFVFLVAKMVSNGGFDERT-YRGAAVVELIHTATLVHDDI- 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +D+ +RR +V+ + A++ G+ LL+ L+LS+ +N Sbjct: 90 -VDDSNMRRSFFSVNALWKNKIAVLVGDFLLSKG------------------LLLSIDNN 130 Query: 154 ---------IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAH 201 I ++ M G++L I+ I E F I + KT L+ C GA Sbjct: 131 DFDLLKLISIAVREMSEGELLQIEKARKLDITEAIYFDIIRKKTATLIAACCGIGAASVG 190 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229 A+Q+ ++R FGE +GI FQ+ DDL D Sbjct: 191 ANQDCIRKMRKFGEYIGIAFQIKDDLFD 218 >gi|113969238|ref|YP_733031.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-4] gi|113883922|gb|ABI37974.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-4] Length = 331 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L D++R +L+ T N+ +G + Q+++ Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSMRVLRVLADTTNVLAEGEVL-QLMNCN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++A A+ ++ L +G+ LG FQL DDLL Sbjct: 163 DPNTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEQETALGDYGKYLGTAFQLTDDLL 222 Query: 229 DCEED 233 D D Sbjct: 223 DYTAD 227 >gi|171679677|ref|XP_001904785.1| hypothetical protein [Podospora anserina S mat+] gi|170939464|emb|CAP64692.1| unnamed protein product [Podospora anserina S mat+] Length = 454 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 24/176 (13%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG P+ ++++ A++AG+ LL A ++ Sbjct: 196 RLAEITELIHTASLLHDDV--IDHSESRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 252 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183 +R ++ L + + ++ G+ + +++ ++ +ET + +QK + Sbjct: 253 -------RLRHAEVIELLATV-IANLVEGEFMQLKNTARDERNPQWSEETLTYYLQKTYL 304 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 KT +L+ +C + A++ + + +G+NLG+ FQL DD+LD E++L K Sbjct: 305 KTASLISKSCRAAALLGGSDAATVDAAYAYGKNLGLAFQLVDDMLDYTRSEQELGK 360 >gi|225631093|ref|ZP_03787822.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591208|gb|EEH12361.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 264 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 8/157 (5%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + V A++E IH +L+HDD+ +D R G T + + ++I+ G+ LLT AF + Sbjct: 10 INVAASVEFIHNATLLHDDV--LDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLI 67 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 N+ +LS ++ ++G + QM D F I KT +L Sbjct: 68 EC-----GNLNILSILSKASHLLVKGEIK-QMKARFDPHTVRENYFDIIGEKTASLFSAC 121 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 CE+ + ++ A+ +E ERL+ FG N G+ FQ+ DD+LD Sbjct: 122 CEAASTVSGATNDETERLKNFGFNFGMAFQIVDDMLD 158 >gi|153217175|ref|ZP_01950939.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587] gi|124113799|gb|EAY32619.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587] Length = 282 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 2 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 59 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L +++ ++S N+ +G + Q+++ Sbjct: 60 AAFGNAASVLVGDFIYTRSFQMM----TEL-GSMKILKLMSDAVNVIAEGEVQ-QLMNCN 113 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 114 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 173 Query: 229 DCEED 233 D D Sbjct: 174 DYTSD 178 >gi|229552897|ref|ZP_04441622.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus LMS2-1] gi|258509306|ref|YP_003172057.1| geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG] gi|258540493|ref|YP_003174992.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus Lc 705] gi|229313766|gb|EEN79739.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus LMS2-1] gi|257149233|emb|CAR88206.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG] gi|257152169|emb|CAR91141.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus Lc 705] gi|259650587|dbj|BAI42749.1| geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG] Length = 325 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 19/191 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R + + + + + AAIE +H +LIHDD+ +D RR + T+ Sbjct: 46 GGKLLRPAYCLLFSRFQDTDREKMIALAAAIETLHTATLIHDDI--IDKSPTRRNQVTIQ 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167 Q+ TA+ AG+ L F++++ + L+ S+ + G ++ +L G++ + Sbjct: 104 KQFGPDTAVYAGDYLFVVCFKLLAHYASSLR---------SIQQDSGSMEKILKGELDQM 154 Query: 168 QDEFIDETQVFMIQKMK-----TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + +TQ+ + +K TG L +C GA + + N + G N+GI FQ Sbjct: 155 ATRY--QTQITINDYLKQVSGKTGQLFALSCFVGAYESGGTTNFAKTAEKIGMNIGIAFQ 212 Query: 223 LADDLLDCEED 233 L DD+LD D Sbjct: 213 LLDDILDYTSD 223 >gi|69248976|ref|ZP_00604834.1| Trans-hexaprenyltranstransferase [Enterococcus faecium DO] gi|257880389|ref|ZP_05660042.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,230,933] gi|257882385|ref|ZP_05662038.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,502] gi|257886155|ref|ZP_05665808.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,501] gi|257891717|ref|ZP_05671370.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,410] gi|257894056|ref|ZP_05673709.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,408] gi|258614163|ref|ZP_05711933.1| heptaprenyl diphosphate synthase, component II, putative [Enterococcus faecium DO] gi|260559354|ref|ZP_05831535.1| trans-hexaprenyltranstransferase [Enterococcus faecium C68] gi|261209112|ref|ZP_05923515.1| trans-hexaprenyltranstransferase [Enterococcus faecium TC 6] gi|289567338|ref|ZP_06447712.1| trans-hexaprenyltranstransferase [Enterococcus faecium D344SRF] gi|293563994|ref|ZP_06678400.1| polyprenyl synthetase [Enterococcus faecium E1162] gi|293568569|ref|ZP_06679887.1| polyprenyl synthetase [Enterococcus faecium E1071] gi|294615036|ref|ZP_06694924.1| polyprenyl synthetase [Enterococcus faecium E1636] gi|294618420|ref|ZP_06697994.1| polyprenyl synthetase [Enterococcus faecium E1679] gi|294622823|ref|ZP_06701775.1| polyprenyl synthetase [Enterococcus faecium U0317] gi|314940477|ref|ZP_07847623.1| polyprenyl synthetase [Enterococcus faecium TX0133a04] gi|314942588|ref|ZP_07849421.1| polyprenyl synthetase [Enterococcus faecium TX0133C] gi|314949713|ref|ZP_07853027.1| polyprenyl synthetase [Enterococcus faecium TX0082] gi|314953265|ref|ZP_07856201.1| polyprenyl synthetase [Enterococcus faecium TX0133A] gi|314992667|ref|ZP_07858080.1| polyprenyl synthetase [Enterococcus faecium TX0133B] gi|314998247|ref|ZP_07863119.1| polyprenyl synthetase [Enterococcus faecium TX0133a01] gi|68194317|gb|EAN08831.1| Trans-hexaprenyltranstransferase [Enterococcus faecium DO] gi|257814617|gb|EEV43375.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,230,933] gi|257818043|gb|EEV45371.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,502] gi|257822011|gb|EEV49141.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,501] gi|257828077|gb|EEV54703.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,410] gi|257830435|gb|EEV57042.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,408] gi|260074453|gb|EEW62774.1| trans-hexaprenyltranstransferase [Enterococcus faecium C68] gi|260076939|gb|EEW64663.1| trans-hexaprenyltranstransferase [Enterococcus faecium TC 6] gi|289160861|gb|EFD08787.1| trans-hexaprenyltranstransferase [Enterococcus faecium D344SRF] gi|291588711|gb|EFF20541.1| polyprenyl synthetase [Enterococcus faecium E1071] gi|291592098|gb|EFF23719.1| polyprenyl synthetase [Enterococcus faecium E1636] gi|291595317|gb|EFF26636.1| polyprenyl synthetase [Enterococcus faecium E1679] gi|291597719|gb|EFF28859.1| polyprenyl synthetase [Enterococcus faecium U0317] gi|291603912|gb|EFF33440.1| polyprenyl synthetase [Enterococcus faecium E1162] gi|313587756|gb|EFR66601.1| polyprenyl synthetase [Enterococcus faecium TX0133a01] gi|313592801|gb|EFR71646.1| polyprenyl synthetase [Enterococcus faecium TX0133B] gi|313594692|gb|EFR73537.1| polyprenyl synthetase [Enterococcus faecium TX0133A] gi|313598660|gb|EFR77505.1| polyprenyl synthetase [Enterococcus faecium TX0133C] gi|313640334|gb|EFS04915.1| polyprenyl synthetase [Enterococcus faecium TX0133a04] gi|313643926|gb|EFS08506.1| polyprenyl synthetase [Enterococcus faecium TX0082] Length = 328 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+ + A+IE +H +LIHDD+ +D +RRG+P + Q+ V ++ AG+ L F+++ Sbjct: 70 AIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S T LK N RS ++ +L G++ + D + E V + KT Sbjct: 128 SDYSTSLKSLQLNSRS-----------MEKVLNGELGQMDDRYNYELSVKEYLENISGKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + S+ ++ G ++G+ FQ+ DD+LD Sbjct: 177 AELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILD 220 >gi|329572077|gb|EGG53747.1| polyprenyl synthetase [Enterococcus faecalis TX1467] Length = 305 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 47 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197 >gi|313158272|gb|EFR57674.1| polyprenyl synthetase [Alistipes sp. HGB5] Length = 373 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 24/208 (11%) Query: 33 TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN---------HLTALRVGAAIECI 82 T + L +RYAL GK IR LV A++ + HL A+ V E I Sbjct: 71 TAEGELLSDMLRYALSSRGKGIRPLLVLLSAAMNSPVAEAAKGRRVHLAAMLV----EMI 126 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDN 141 H SLIHDD+ +D +RRGKP+ + ++ A+I G+ +L I ++S + L + Sbjct: 127 HVASLIHDDV--IDEADMRRGKPSANARWQSHKAVILGDYILARNLSIGLTSGQFDLVTH 184 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 + M +L LQ + + ++D +I K KT L+ + +GA+ Sbjct: 185 VCGS-MAALCEGEVLQSECAEKHTMTRQAYLD-----IIYK-KTACLIGVSASAGAMAVG 237 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229 ASQ + +R FGE +G+ FQ+ DD+LD Sbjct: 238 ASQQKVALMRRFGEAVGMAFQIQDDILD 265 >gi|326798537|ref|YP_004316356.1| trans-hexaprenyltranstransferase [Sphingobacterium sp. 21] gi|326549301|gb|ADZ77686.1| Trans-hexaprenyltranstransferase [Sphingobacterium sp. 21] Length = 323 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 18/221 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLF 65 KL+E K I T LDD ++ M++ + LL I + ++ GK++R V A Sbjct: 3 KLEEIKKPIATELDDFEIKFKESMRS--SVPLLDRITHYIVKRKGKQMRPMFVFFAAGAC 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + + R A +E +H +L+HDD+ +DN Y RRG +V+ + A++ G+ LL+ Sbjct: 61 GGINESTHRGAALVELVHTATLVHDDV--VDNSYQRRGFFSVNALWKNKIAVLVGDFLLS 118 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQK 182 + S K Q + +R N + M G++L ++ IDE F + + Sbjct: 119 KGLSL--SVKNQDFEFLR-------ILNEAVTEMSEGELLQMEKARRLDIDEGVYFEVIR 169 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 KT +L+ C GA +A ++ FGE +GI FQ+ Sbjct: 170 QKTASLIASCCACGAASTNAPSELVTKMHDFGEKVGIAFQI 210 >gi|315172839|gb|EFU16856.1| polyprenyl synthetase [Enterococcus faecalis TX1346] Length = 305 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 47 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197 >gi|315028641|gb|EFT40573.1| polyprenyl synthetase [Enterococcus faecalis TX4000] Length = 305 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 47 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197 >gi|255659210|ref|ZP_05404619.1| heptaprenyl diphosphate synthase component II [Mitsuokella multacida DSM 20544] gi|260848662|gb|EEX68669.1| heptaprenyl diphosphate synthase component II [Mitsuokella multacida DSM 20544] Length = 319 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 24/197 (12%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L F++ H+ L + A+E IH SL+HDD+ +D RRG Sbjct: 38 GGKRIRPALCLLSARGGKAFDLPHV--LPLAEALELIHTASLVHDDV--IDEADTRRGAA 93 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T + +++ AI++G+ + AF +++ + D + +L L N+ + G++ Sbjct: 94 TANARWNNQVAILSGDYIFARAFALLA--EAGYGDYVLKRLA-ELVCNLSV-----GEI- 144 Query: 166 DIQDEFIDETQVFM------IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 IQD I + M IQK KT + CE G ++ + E +L +G +G+ Sbjct: 145 -IQDHAIYQASRGMADYFERIQK-KTADFLEICCELGGLVGGMDREEAGKLAEYGHCIGM 202 Query: 220 IFQLADDLLDCEEDLPK 236 FQ+ DDLLD E+ K Sbjct: 203 AFQITDDLLDIEQTTEK 219 >gi|315163581|gb|EFU07598.1| polyprenyl synthetase [Enterococcus faecalis TX1302] Length = 305 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 47 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNVSGKT 153 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197 >gi|312910738|ref|ZP_07769577.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516] gi|311289001|gb|EFQ67557.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516] Length = 305 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 47 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197 >gi|315047266|ref|XP_003173008.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma gypseum CBS 118893] gi|311343394|gb|EFR02597.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma gypseum CBS 118893] Length = 491 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++ + A++AG+ LL A I+ Sbjct: 233 RLAEITELIHTASLLHDDV--IDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIA- 289 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK--M 183 +L+D +L+ ++ N ++ G+ + +++ +DE+ + +QK + Sbjct: 290 ---RLRDPEVIELLGTVMAN-----LVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYL 341 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K+ +L+ +C + A++ + E FG NLG+ FQL DD+LD Sbjct: 342 KSASLISKSCRAAALLNQSGPEVAEAAYLFGRNLGLAFQLVDDMLD 387 >gi|315150866|gb|EFT94882.1| polyprenyl synthetase [Enterococcus faecalis TX0012] Length = 305 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 47 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197 >gi|257888791|ref|ZP_05668444.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,141,733] gi|257824845|gb|EEV51777.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,141,733] Length = 328 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+ + A+IE +H +LIHDD+ +D +RRG+P + Q+ V ++ AG+ L F+++ Sbjct: 70 AIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S T LK N RS ++ +L G++ + D + E V + KT Sbjct: 128 SDYSTSLKSLQLNSRS-----------MEKVLNGELGQMDDRYNYELSVKEYLENISGKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + S+ ++ G ++G+ FQ+ DD+LD Sbjct: 177 AELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILD 220 >gi|227552808|ref|ZP_03982857.1| possible trans-hexaprenyltranstransferase [Enterococcus faecium TX1330] gi|257897275|ref|ZP_05676928.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com12] gi|293378986|ref|ZP_06625141.1| polyprenyl synthetase [Enterococcus faecium PC4.1] gi|227178051|gb|EEI59023.1| possible trans-hexaprenyltranstransferase [Enterococcus faecium TX1330] gi|257833840|gb|EEV60261.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com12] gi|292642527|gb|EFF60682.1| polyprenyl synthetase [Enterococcus faecium PC4.1] Length = 328 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+ + A+IE +H +LIHDD+ +D +RRG+P + Q+ V ++ AG+ L F+++ Sbjct: 70 AIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S T LK N RS ++ +L G++ + D + E V + KT Sbjct: 128 SDYSTSLKSLQLNSRS-----------MEKVLNGELGQMDDRYNYELSVKEYLENISGKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + S+ ++ G ++G+ FQ+ DD+LD Sbjct: 177 AELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILD 220 >gi|307269989|ref|ZP_07551314.1| polyprenyl synthetase [Enterococcus faecalis TX4248] gi|307272595|ref|ZP_07553847.1| polyprenyl synthetase [Enterococcus faecalis TX0855] gi|306510733|gb|EFM79751.1| polyprenyl synthetase [Enterococcus faecalis TX0855] gi|306513654|gb|EFM82261.1| polyprenyl synthetase [Enterococcus faecalis TX4248] gi|315025798|gb|EFT37730.1| polyprenyl synthetase [Enterococcus faecalis TX2137] gi|315154679|gb|EFT98695.1| polyprenyl synthetase [Enterococcus faecalis TX0043] gi|315158962|gb|EFU02979.1| polyprenyl synthetase [Enterococcus faecalis TX0312] gi|315167121|gb|EFU11138.1| polyprenyl synthetase [Enterococcus faecalis TX1341] Length = 305 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 47 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197 >gi|293389766|ref|ZP_06634208.1| polyprenyl synthetase [Enterococcus faecalis S613] gi|291080924|gb|EFE17887.1| polyprenyl synthetase [Enterococcus faecalis S613] Length = 305 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 47 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDFLFVCCFKLL 104 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197 >gi|86140643|ref|ZP_01059202.1| polyprenyl synthetase [Leeuwenhoekiella blandensis MED217] gi|85832585|gb|EAQ51034.1| polyprenyl synthetase [Leeuwenhoekiella blandensis MED217] Length = 325 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GK++R V A + L R + IE IH +L+HDD+ +D+ Y RRG ++ Sbjct: 45 GKQMRPMFVFLVAKMLGDERLNDRTYRGASVIELIHTATLVHDDV--VDDSYRRRGFFSL 102 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + A++ G+ LL+ ++S DN L+ ++ + ++ M G++L I Sbjct: 103 NALWKNKIAVLVGDFLLSKGL-LLSI------DNEDFDLLQIIS--VAVREMSEGELLQI 153 Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D I E F I + KT L+ C GA HAS+ + E +R FGE +G+ FQ+ Sbjct: 154 EKARDLDITEEVYFEIIRQKTATLIAACCAMGACAIHASKKDVEAMRKFGELIGLAFQIK 213 Query: 225 DDLLD 229 DDL D Sbjct: 214 DDLFD 218 >gi|227555199|ref|ZP_03985246.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis HH22] gi|307292276|ref|ZP_07572139.1| polyprenyl synthetase [Enterococcus faecalis TX0411] gi|312905555|ref|ZP_07764669.1| polyprenyl synthetase [Enterococcus faecalis TX0635] gi|227175657|gb|EEI56629.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis HH22] gi|306496691|gb|EFM66245.1| polyprenyl synthetase [Enterococcus faecalis TX0411] gi|310631284|gb|EFQ14567.1| polyprenyl synthetase [Enterococcus faecalis TX0635] gi|315162309|gb|EFU06326.1| polyprenyl synthetase [Enterococcus faecalis TX0645] gi|315574620|gb|EFU86811.1| polyprenyl synthetase [Enterococcus faecalis TX0309B] gi|315576540|gb|EFU88731.1| polyprenyl synthetase [Enterococcus faecalis TX0630] Length = 305 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 47 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197 >gi|55379709|ref|YP_137559.1| farnesyl-pyrrophosphate synthase [Haloarcula marismortui ATCC 43049] gi|55232434|gb|AAV47853.1| farnesyl-pyrrophosphate synthase [Haloarcula marismortui ATCC 43049] Length = 280 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 14/204 (6%) Query: 31 MQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 + + + L +R+ AL GGK++R + A+ IE +H SL+ Sbjct: 19 LDSVEPEELADEVRHVALSGGKRVRPTVTVLVCEALGGEPADAVDFAVGIELVHNASLVI 78 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D +RRG P + AIIA +GLL AF + S+ + ++ S+ M+ Sbjct: 79 DDI--IDESELRRGSPAAWEAFGHGPAIIASDGLLGEAFNLFSTDERAMQ--TVSESMVE 134 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 L G+ +++ E +E + + + KTGAL A E GAI A + E Sbjct: 135 LGE---------GEAMELVAEPSNEKEYMELARRKTGALFRAAAELGAIAADSDPYTVEA 185 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 + + E +G+ FQ+ DD+LD D Sbjct: 186 VGQYAERVGVAFQMRDDVLDATAD 209 >gi|260063737|ref|YP_003196817.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501] gi|88783182|gb|EAR14355.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501] Length = 325 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 18/217 (8%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFN---VNHLTALRVGAA 78 L + H LL+ I Y ++ GK++R V A L N VN T R + Sbjct: 17 LFEKKFHQSMSSKVPLLNRITYYIVNRKGKQMRPMFVFLTAKLLNEGQVNERT-YRGASV 75 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE IH SL+HDD+ +D + RRG +++ + A++ G+ LL ++ S Sbjct: 76 IELIHTASLVHDDV--VDESFKRRGFFSINALWKNKIAVLVGDFLLARG--MLLSVDNGD 131 Query: 139 KDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196 D +R S M ++ LQ + + LDI +E E I + KT L+ C G Sbjct: 132 FDLLRIISAAMREISEGELLQ-LEKARRLDITEEVYYE-----IIRQKTATLIAACCSLG 185 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A E R FGE G+ FQ+ DDL D E+ Sbjct: 186 AASVRPDSEYVEMFRKFGERCGMAFQIKDDLFDYGEN 222 >gi|329944216|ref|ZP_08292475.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386] gi|328530946|gb|EGF57802.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386] Length = 368 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 34/199 (17%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L A L + ++ G A+E H +L HDD+ MD +RRG P Sbjct: 49 GGKRLRPVLALLTAQLGDPALAAGEQIRDAGVAVELTHIATLYHDDV--MDEAPLRRGAP 106 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + + AI+ G+ L+ A +++++ P+ + H + + GQ Sbjct: 107 SAQTVWGNSAAILTGDVLVARASQLVAALGPEA------------VMAHAKTFERLCMGQ 154 Query: 164 M---------LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + D D +I QV KTG+L+ + GA++ A + + FG Sbjct: 155 LHETLPRPSGTDPVDHYI---QVL---ADKTGSLIAVSARYGAMLTGAGVRTERIVEEFG 208 Query: 215 ENLGIIFQLADDLLDCEED 233 E +G+ FQLADD++D D Sbjct: 209 EKIGVAFQLADDVIDLMSD 227 >gi|307283879|ref|ZP_07564052.1| polyprenyl synthetase [Enterococcus faecalis TX0860] gi|306503529|gb|EFM72776.1| polyprenyl synthetase [Enterococcus faecalis TX0860] gi|315147034|gb|EFT91050.1| polyprenyl synthetase [Enterococcus faecalis TX4244] Length = 305 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 47 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197 >gi|160883389|ref|ZP_02064392.1| hypothetical protein BACOVA_01358 [Bacteroides ovatus ATCC 8483] gi|237720619|ref|ZP_04551100.1| octaprenyl-diphosphate synthase [Bacteroides sp. 2_2_4] gi|260172659|ref|ZP_05759071.1| octaprenyl-diphosphate synthase [Bacteroides sp. D2] gi|293368662|ref|ZP_06615269.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f] gi|315920952|ref|ZP_07917192.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156111109|gb|EDO12854.1| hypothetical protein BACOVA_01358 [Bacteroides ovatus ATCC 8483] gi|229450370|gb|EEO56161.1| octaprenyl-diphosphate synthase [Bacteroides sp. 2_2_4] gi|292636304|gb|EFF54789.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f] gi|313694827|gb|EFS31662.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 324 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 14/183 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A L+ + L ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILVLLVARLYGAICPSTLHAAVSLELLHTASLVHDDV--VDESSERRGQLSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166 ++ A++ G+ LL A ++ + T S ++ L +G Q + G++L + Sbjct: 103 IFNNKVAVLTGDYLL--ATSLVHAELTN------SHRIIQLVSTLG-QDLADGELLQLSN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + E F + + KT AL ++ A + E E R GE +GI FQ+ DD Sbjct: 154 VSNHSFSEEVYFDVIRKKTAALFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDD 213 Query: 227 LLD 229 + D Sbjct: 214 IFD 216 >gi|77361572|ref|YP_341147.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas haloplanktis TAC125] gi|76876483|emb|CAI87705.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas haloplanktis TAC125] Length = 323 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + +E IH +L+HDD+ +D +RRG PT + Sbjct: 43 GGKRVRPMLAILAARALGYQGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ +++ G+ + T +F++ + K Q+ Q++ T+ I +L Q+++ Sbjct: 101 AEFGNAASVLVGDFIYTRSFQLMVGLGKMQVM-----QVLADATNIIAEGEVL--QLMNC 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E + KT L A AI+ +Q + L +G +LG FQL DD+ Sbjct: 154 NDPDTTEASYMQVIYSKTAKLFEAATGLAAIITEQNQATLDALNLYGMHLGTAFQLVDDV 213 Query: 228 LDCEED 233 LD D Sbjct: 214 LDYNAD 219 >gi|326403627|ref|YP_004283709.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301] gi|325050489|dbj|BAJ80827.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301] Length = 344 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + + A +E IH +L+HDD+ +D +RRG + + Sbjct: 63 GGKRLRPLLTLAAARLCGYRGERHIHLAACVEFIHTATLLHDDV--VDESGLRRGLASAN 120 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L AFE++ + D +R ++ + + I +L Q+ Sbjct: 121 AVFGNKASVLVGDFLFARAFELMVEDGSL--DVLR--ILCNASATIAEGEVL--QLTTQN 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D D + F + + KT AL ACE G ++A L +G LG+ FQL DD L Sbjct: 175 DLSTDIPRYFKVIEGKTAALFAAACEVGGVVADRDSAVCGALAGYGAALGMAFQLVDDAL 234 Query: 229 DCEED 233 D D Sbjct: 235 DYAAD 239 >gi|294139556|ref|YP_003555534.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12] gi|293326025|dbj|BAJ00756.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12] Length = 323 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPLLTILAARAIDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L +++ ML+ N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELG-SMKVLEMLADATNVLAEGEV-LQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A + + L +G+ LG FQL DDLL Sbjct: 155 DPDTSEENYMRVIYCKTAKLFEAATRLAGVLADSPIEIQTALADYGKYLGTAFQLTDDLL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|293572766|ref|ZP_06683720.1| polyprenyl synthetase [Enterococcus faecium E980] gi|291607116|gb|EFF36484.1| polyprenyl synthetase [Enterococcus faecium E980] Length = 328 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+ + A+IE +H +LIHDD+ +D +RRG+P + Q+ V ++ AG+ L F+++ Sbjct: 70 AIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S T LK N RS ++ +L G++ + D + E V + KT Sbjct: 128 SDYSTSLKSLQLNSRS-----------MEKVLNGELGQMDDRYNYELSVKEYLENISGKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + S+ ++ G ++G+ FQ+ DD+LD Sbjct: 177 AELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILD 220 >gi|269218351|ref|ZP_06162205.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212210|gb|EEZ78550.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 848 str. F0332] Length = 316 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 18/190 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV A L A L A+E H SL HDD+ MD+ +RRG P+V Sbjct: 30 GGKRLRPALVLLAAELGPRPGAEAVLDSAVAVELTHLASLYHDDV--MDDAPMRRGVPSV 87 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKT-QLKDNIRSQLMLSLTH-NIGLQGMLGGQ 163 + AI+AG+ L A + S P+ +L +L H IG + + Sbjct: 88 QSLFGNSVAILAGDVLFARASLVTSKLGPQAVKLHATTFERLCQGQLHETIGPRASVS-- 145 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 +D +I + + KTG+L+ + G + + S + L +GE +G+ FQL Sbjct: 146 ---PRDHYI------RVLEDKTGSLIATSARYGVLFSGGSWELADALAQYGECIGVAFQL 196 Query: 224 ADDLLDCEED 233 ADD++D E D Sbjct: 197 ADDVIDIESD 206 >gi|124516584|gb|EAY58092.1| trans-hexaprenyltranstransferase [Leptospirillum rubarum] Length = 330 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 21/196 (10%) Query: 49 GGKKIRSFL--VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R L + S ++ H++ L A +E IH +L+HDD+ +D+ +RRGK + Sbjct: 49 GGKRLRPLLMIIASRISGYSGPHISLL--SAVVEFIHTATLLHDDV--VDHAEMRRGKLS 104 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + + TA++ G+ L A + + I L L+ + M G++L+ Sbjct: 105 ANQIWGNQTAVLVGDYLYATALWMATGVHNH---EINDTLTLAC------RKMSEGEVLE 155 Query: 167 -IQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I D + E + + KT AL C GAI+ A +K+ L FG N+G+ FQ+ Sbjct: 156 LILDNNLSAREEDYLSVVECKTAALTAGTCRIGAILGGADTEKKKALEDFGYNIGMSFQI 215 Query: 224 ADDLLDC---EEDLPK 236 ADD LD EE L K Sbjct: 216 ADDALDYMAREERLGK 231 >gi|29829548|ref|NP_824182.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] gi|29606656|dbj|BAC70717.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] Length = 394 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 23/226 (10%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70 E + +D++ + H +H D +A GK IR LV Sbjct: 75 ELRRAVDSLPGSMRRIALHHFGWEHADGTPAAGNA----GKAIRPALVLAAVRALGGPQS 130 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 +A+R AA+E IH ++L+HDD+ MD RR +PT + + AI+AG+ L A + Sbjct: 131 SAVRAAAAVELIHNFTLLHDDV--MDRDTTRRHRPTAWTVFGDADAILAGDALQALAHRL 188 Query: 131 ISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQK 182 ++ P + + ++ L GQ D E +V + + + Sbjct: 189 LAEDPHPASAAAAARLAACVIELC---------AGQHADTAMERRGPGEVTLDECLAMAE 239 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 KTGAL+ AC GA+ A A + + E L FG G+ FQL DD++ Sbjct: 240 AKTGALLGCACALGALYAGAEEEDVEALDAFGREAGLAFQLIDDVI 285 >gi|256378414|ref|YP_003102074.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827] gi|255922717|gb|ACU38228.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827] Length = 557 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 17/205 (8%) Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 + D +L RYALL GK +R L+ A + + A+E +H SL+HDD Sbjct: 251 PETGDPVLDISRYALLTPGKMLRPLLLASAAGAVGGDVERVVPAALAVEYLHVGSLVHDD 310 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--------PKTQLKDNIR 143 + +D+ +RRG+P+V ++ AI+ G+ L+ F +++ Sbjct: 311 V--IDDDEVRRGQPSVQHRFGVPEAIVVGDALIFKTFSAVAACVELGVTAEAALGAARAI 368 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 + + + L+G L +++ + +KTGAL AC +GA++ Sbjct: 369 ADAGVDVCRGQALEGALAADPTHPLGDYV------TVMALKTGALFRGACRAGALLGGGG 422 Query: 204 QNEKERLRCFGENLGIIFQLADDLL 228 E + + E+LG+ FQ+ DDLL Sbjct: 423 PEAVEAVTSYAEHLGLAFQVHDDLL 447 >gi|254458444|ref|ZP_05071869.1| polyprenyl synthetase [Campylobacterales bacterium GD 1] gi|207084752|gb|EDZ62039.1| polyprenyl synthetase [Campylobacterales bacterium GD 1] Length = 295 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 30/208 (14%) Query: 37 DRLLSAIRY--------ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 +RL+ I Y L GGK++R+ L+ + A H A + A +E IH SL+ Sbjct: 9 ERLIKEIDYDEVTRLFNMLSGGKRLRAKLILKIAP----EHEKAPLLAAIVELIHGASLL 64 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D RRG +V+ TA++ G+ L + AF + + +I + Sbjct: 65 HDDV--IDESITRRGVASVNATDGSKTAVMLGDILYSKAF----TELVEFDRDIAKSIAS 118 Query: 149 SLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 S+T + G+M D++ DEF DE + + +KT L+ A + A++ Sbjct: 119 SVT------ALSKGEMQDVKMADEFNEDEEKYLDMLYLKTATLIEAAAYASALLVG---K 169 Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G+NLG+ FQ+ DD+LD D Sbjct: 170 DADKYGVYGKNLGLSFQIIDDILDITAD 197 >gi|153825628|ref|ZP_01978295.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2] gi|149740658|gb|EDM54765.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2] Length = 304 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 14/188 (7%) Query: 49 GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L A +H TA A IE IH +L+HDD+ +D +RRGK Sbjct: 24 GGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHTATLLHDDV--VDESDLRRGKA 78 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T + + +++ G+ + T +F+++ T+L +++ ++S N+ +G + Q++ Sbjct: 79 TANAAFGNAASVLVGDFIYTRSFQMM----TEL-GSMKILKLMSDAVNVIAEGEVQ-QLM 132 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D E + KT L A + GAI+ AS + ++ +G+ LG FQL D Sbjct: 133 NCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLID 192 Query: 226 DLLDCEED 233 D++D D Sbjct: 193 DVMDYTSD 200 >gi|328877029|gb|EGG25392.1| trans-prenyltransferase [Dictyostelium fasciculatum] Length = 485 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 21/193 (10%) Query: 45 YALLGGKKIRS---FLVTECASLFNVNHLTA-----LRVGAAIECIHCYSLIHDDLPSMD 96 Y L GK+IR L++ C L ++T +++ +E IH +L+HDD+ +D Sbjct: 202 YFQLKGKRIRPTIILLLSRC--LLQQKNITEPIASQIKLAEIVEMIHTATLVHDDV--ID 257 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 RR P+V+ + +I+ G+ LL A ++S QL++ S+L+ + L Sbjct: 258 EATTRRDVPSVNKSFSNKLSILCGDYLLARASVLLS----QLRNPDVSELI-----STSL 308 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 ++ G+ + ++ Q +KT +L+ +C++ A++ + FG+N Sbjct: 309 ADLVEGEFMQVKSNESSFEQYLRKTYLKTASLISNSCKATALLGGEDAHTANLAFEFGKN 368 Query: 217 LGIIFQLADDLLD 229 LG+ FQL DDLLD Sbjct: 369 LGLAFQLIDDLLD 381 >gi|262198874|ref|YP_003270083.1| Geranyltranstransferase [Haliangium ochraceum DSM 14365] gi|262082221|gb|ACY18190.1| Geranyltranstransferase [Haliangium ochraceum DSM 14365] Length = 355 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 20/192 (10%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 LGGK +R V A + ++ A+E +H +L+HDD+ +D G RRG PT Sbjct: 73 LGGKHLRPMCVALAAKMGTGFDAHGRQLAMAVELVHTATLLHDDV--VDIGDSRRGVPTA 130 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD------NIRSQLMLSLTHNIGLQGMLG 161 Y ++ AG+ LL A I +T L D I +++L+ + + +G LG Sbjct: 131 RTIYGNAASVFAGDWLLVDALRRIR--QTGLSDLLDRMLAIIEEMILAESLQLERRGSLG 188 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 E F + + KT AL +A +G ++ L +G +LG+ F Sbjct: 189 DS----------EEVYFQVVEGKTAALFRWAMYAGGRAGGLDEDACLALERYGRHLGVAF 238 Query: 222 QLADDLLDCEED 233 Q+ DDLLD D Sbjct: 239 QVVDDLLDFSGD 250 >gi|315501200|ref|YP_004080087.1| polyprenyl synthetase [Micromonospora sp. L5] gi|315407819|gb|ADU05936.1| Polyprenyl synthetase [Micromonospora sp. L5] Length = 346 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 18/185 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + + +E H +L HDD+ MD +RRG P+ + Sbjct: 65 GGKRFRPLLVALGAQFGDPDTDQVVPAAVVMELTHLATLYHDDV--MDEAAVRRGAPSAN 122 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ AI+ G+ L A +I + P+ ++++ L H GQ+ + Sbjct: 123 SRWTNSVAILVGDYLFARAADIAADLGPEAV---RLQARTFARLVH---------GQIAE 170 Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D ++ + KTG+L+ + G + A+ E L +GE +G+ FQL+ Sbjct: 171 TVGPRDTDPVAHYLHVIAEKTGSLIATSARFGGMFGGAAPEHVEALAEYGEIIGVAFQLS 230 Query: 225 DDLLD 229 DDLLD Sbjct: 231 DDLLD 235 >gi|302864915|ref|YP_003833552.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] gi|302567774|gb|ADL43976.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] Length = 346 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 18/185 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + + +E H +L HDD+ MD +RRG P+ + Sbjct: 65 GGKRFRPLLVALGAQFGDPDTDQVVPAAVVMELTHLATLYHDDV--MDEAAVRRGAPSAN 122 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ AI+ G+ L A +I + P+ ++++ L H GQ+ + Sbjct: 123 SRWTNSVAILVGDYLFARAADIAADLGPEAV---RLQARTFARLVH---------GQIAE 170 Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D ++ + KTG+L+ + G + A+ E L +GE +G+ FQL+ Sbjct: 171 TVGPRDTDPVAHYLHVIAEKTGSLIATSARFGGMFGGAAPEHVEALAEYGEIIGVAFQLS 230 Query: 225 DDLLD 229 DDLLD Sbjct: 231 DDLLD 235 >gi|256760927|ref|ZP_05501507.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T3] gi|256682178|gb|EEU21873.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T3] Length = 328 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ + TA+ G+ L F+++ Sbjct: 70 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSHFGNSTAVYTGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 220 >gi|313894963|ref|ZP_07828522.1| putative heptaprenyl diphosphate synthase component 2 [Selenomonas sp. oral taxon 137 str. F0430] gi|312976416|gb|EFR41872.1| putative heptaprenyl diphosphate synthase component 2 [Selenomonas sp. oral taxon 137 str. F0430] Length = 325 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 17/224 (7%) Query: 16 IDTILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRS---FLVTECASLFNVNH 69 D I +DL +L+TA + L+S I L+ GGK++R L + F+ + Sbjct: 6 FDVIEEDLTVLETALEAALSSDSALVSDIGAHLVSSGGKRLRPALFLLAARGGTAFDRDR 65 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A+ + A+E IH SL+HDD+ +D RRG T + ++ AI++G+ + AF+ Sbjct: 66 --AMPIAVALELIHTASLVHDDV--IDEADTRRGAATTNAKWGNQVAILSGDYIFARAFK 121 Query: 130 IISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 ++ +R + L+ +L+ LQ Q+ +D + + + KT Sbjct: 122 QVARVGYSWHIYMRLADLVCTLSEGEILQDHTVYQVPVSEDAYYERI------RKKTADF 175 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + CE GA + S + +G +G+ FQ+ DDLLD ++ Sbjct: 176 LEICCELGAGIGGMSAEDTANFARYGHAIGMAFQITDDLLDLQQ 219 >gi|256380651|ref|YP_003104311.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827] gi|255924954|gb|ACU40465.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827] Length = 333 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 106/204 (51%), Gaps = 18/204 (8%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLI 88 ++++ N + +++ GGK+IR L T A+ F + + + ++ A +E H +L Sbjct: 37 VRSEFNPVMETSLHLVEAGGKRIRP-LFTILAAQFGPSWDRESVVKAAAVVELTHLATLY 95 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ MD +RRG + + +++ AI+ G+ L +A +++ ++ ++ Sbjct: 96 HDDV--MDEATMRRGAASANAKWNNSIAILTGDYLFAHASTLVA--------DLGTEAAR 145 Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQN 205 +++ G ++ GQM + E D + ++ KTG+L+ A G + + A++ Sbjct: 146 TISRTFG--ELVTGQMRETMGPREGEDPVEHYLTTIAEKTGSLIATAARFGGMFSDATEE 203 Query: 206 EKERLRCFGENLGIIFQLADDLLD 229 + L+ +G+ +G FQ++DD++D Sbjct: 204 QVAALQAYGDVIGSAFQISDDVID 227 >gi|114798232|ref|YP_759407.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444] gi|114738406|gb|ABI76531.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444] Length = 337 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 9/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A + + AA+E IH +L+HDD+ +D +RRGKP Sbjct: 57 GGKRLRPMITLIAAHAVGKANAATHALAAAVEFIHTATLLHDDV--VDESDLRRGKPAAK 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L AF ++ + +I ++L + T + +G + Q+ + Sbjct: 115 AIWGNKAAILVGDFLFARAFNLLVEANSL---DILNRLATAST--VIAEGEV-RQLAAMA 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + I + KTGAL A E+GA M+ + + L +G+NLG+ FQ+ DD L Sbjct: 169 TRDLPTEEYLAIVEAKTGALFEAAAETGA-MSAGGEEYSDALATYGKNLGLAFQIIDDAL 227 Query: 229 D 229 D Sbjct: 228 D 228 >gi|109900040|ref|YP_663295.1| trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c] gi|109702321|gb|ABG42241.1| Trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c] Length = 323 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A N+ + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLTVLAARALNIQTEQHHTLAAIIEFIHTATLLHDDV--VDESTMRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ + D++R +LS N+ +G + Q+++ Sbjct: 101 EVFGNQASVLVGDFLYTRSFQMMVT-----LDSMRVMQILSDATNVIAEGEV-LQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ S+ + ++ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMEVIYSKTARLFEAATLLAGVLTKQSEAIENAMQDYGKYLGTAFQLVDDIM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYASD 219 >gi|163786379|ref|ZP_02180827.1| octaprenyl-diphosphate synthase [Flavobacteriales bacterium ALC-1] gi|159878239|gb|EDP72295.1| octaprenyl-diphosphate synthase [Flavobacteriales bacterium ALC-1] Length = 325 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%) Query: 50 GKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GK++R V A + N ++ R + IE IH +L+HDD+ +D+ RRG ++ Sbjct: 45 GKQMRPMFVFLVAKMMNNGEVSERTYRGASVIELIHTATLVHDDV--VDDSNRRRGFFSI 102 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQG 158 + + A++ G+ LL+ L+LS+ +N + ++ Sbjct: 103 NALWKNKIAVLIGDYLLSKG------------------LLLSIDNNDFDLLKIISVAVRE 144 Query: 159 MLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 M G++L I+ I E + I + KT L+ C GA + E E +R FGE Sbjct: 145 MSEGELLQIEKARQLDITEAVYYDIIRQKTATLIAACCSLGAASVKPNSPEVESMRKFGE 204 Query: 216 NLGIIFQLADDLLDCEED 233 +G+ FQ+ DDL D E+ Sbjct: 205 LIGMAFQIKDDLFDYGEE 222 >gi|312899735|ref|ZP_07759057.1| polyprenyl synthetase [Enterococcus faecalis TX0470] gi|311293131|gb|EFQ71687.1| polyprenyl synthetase [Enterococcus faecalis TX0470] Length = 300 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A+IE +H +L+HDD+ +D RRG PT+ ++ TA+ G+ L F+++ Sbjct: 47 ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S + LK N RS ++ +L G++ + + + E + K KT Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + SQ +R GEN+G+ FQ+ DD+LD Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197 >gi|332531718|ref|ZP_08407603.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332038694|gb|EGI75136.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 323 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + +E IH +L+HDD+ +D +RRG PT + Sbjct: 43 GGKRVRPMLAILAAKALGYQGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ +++ G+ + T +F++ + K Q+ Q++ T+ I +L Q+++ Sbjct: 101 AEFGNAASVLVGDFIYTRSFQLMVGLGKMQIM-----QVLADATNIIAEGEVL--QLMNC 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E + KT L A AI+ Q + L +G +LG FQL DD+ Sbjct: 154 NDPDTTEASYMQVIYSKTAKLFEAATGLAAIITEQDQATLDALNLYGMHLGTAFQLVDDV 213 Query: 228 LDCEED 233 LD D Sbjct: 214 LDYNAD 219 >gi|199598547|ref|ZP_03211964.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus HN001] gi|199590589|gb|EDY98678.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus HN001] Length = 325 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 19/191 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R + + + + + AAIE +H +LIHDD+ +D RR + T+ Sbjct: 46 GGKLLRPAYCLLFSRFQDTDREKMIALAAAIETLHTATLIHDDI--IDKSPTRRNQVTIQ 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167 Q+ TA+ AG+ L F++++ + L+ S+ + G ++ +L G++ + Sbjct: 104 KQFGPDTAVYAGDYLFVVCFKLLAHYASSLR---------SIQQDSGSMEKILKGELDQM 154 Query: 168 QDEFIDETQVFMIQKMK-----TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + +TQ+ + +K TG L +C GA + + N + G N+GI FQ Sbjct: 155 ATRY--QTQITINDYLKQVSGKTGQLFALSCFIGAYESGGTTNFAKTAEKIGMNIGIAFQ 212 Query: 223 LADDLLDCEED 233 L DD+LD D Sbjct: 213 LLDDILDYTSD 223 >gi|326318388|ref|YP_004236060.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375224|gb|ADX47493.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 326 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 8/183 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + + A IE IH +L+HDD+ +D +RRG+PT + Sbjct: 47 GGKRLRPALLLLMSGALGYQGAQRFNLAAVIEFIHTATLLHDDV--VDESTMRRGRPTAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ D++R +LS NI +G + Q+++ Sbjct: 105 ENFGNPASVLVGDFLHSRAFQMMVD-----ADDMRVMQILSEATNIIAEGEVQ-QLMNTH 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + KT L + A++A A +E +G+ LG FQ+ DD+L Sbjct: 159 DATLDEQGYLEVIRSKTAKLFEASARLAAVLARAPAPIEEACAEYGKALGTAFQVIDDVL 218 Query: 229 DCE 231 D + Sbjct: 219 DYD 221 >gi|299145219|ref|ZP_07038287.1| polyprenyl synthetase [Bacteroides sp. 3_1_23] gi|298515710|gb|EFI39591.1| polyprenyl synthetase [Bacteroides sp. 3_1_23] Length = 324 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 14/183 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A L+ + L ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILVLLVARLYGAICPSTLHAAVSLELLHTASLVHDDV--VDESSERRGQLSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166 ++ A++ G+ LL A ++ + T S ++ L +G Q + G++L + Sbjct: 103 IFNNKVAVLTGDYLL--ATSLVHAELTT------SHRIIQLVSTLG-QDLADGELLQLSN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + E F + + KT AL ++ A + E E R GE +GI FQ+ DD Sbjct: 154 VSNHSFSEEVYFDVIRKKTAALFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDD 213 Query: 227 LLD 229 + D Sbjct: 214 IFD 216 >gi|262376679|ref|ZP_06069907.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145] gi|262308389|gb|EEY89524.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145] Length = 325 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A +L R + A IE +H +L+HDD+ +D +RRG+PT Sbjct: 46 GGKRMRPIMCLLAAKACGAENLEPHRKLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ TA++ G+ L++ AF+++ + ++L + G + G++L + Sbjct: 104 NATWNNQTAVLVGDFLISRAFDLLVD---------LNNMVLLKDFSTGTCEIAEGEVLQL 154 Query: 168 QDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q + ET I KT L A E AI++ + ++ L+ F + G FQ+ Sbjct: 155 QSQHQPETTEATYLNIIHGKTSRLFELATEGAAILSDKDEF-RQPLKTFAGHFGNAFQII 213 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 214 DDILDYTSD 222 >gi|257453962|ref|ZP_05619238.1| solanesyl diphosphate synthase [Enhydrobacter aerosaccus SK60] gi|257448627|gb|EEV23594.1| solanesyl diphosphate synthase [Enhydrobacter aerosaccus SK60] Length = 347 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 24/189 (12%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + C+ + N A+ +GA E +H +L+HDD+ +D +RRGKPT Sbjct: 68 GGKRMRPLISLLCSRICNDQPSQAAMHLGAITEMLHTATLVHDDV--IDASGMRRGKPTA 125 Query: 108 HIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + +D TA++ G+ L+ +F ++ S P QL + G + G+ Sbjct: 126 NATWDNATAVLVGDYLIARSFNLLVGFGSLPLLQLFSD-------------GTCDIAEGE 172 Query: 164 MLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 +L +Q D E I KT L A + AI+ + + + FG++ G Sbjct: 173 VLQLQHQHDPKATEADYMKIIDGKTSRLFMMASQGVAILENRPE-YNDAFAKFGQHFGNA 231 Query: 221 FQLADDLLD 229 FQ+ DD+LD Sbjct: 232 FQIIDDVLD 240 >gi|19704873|ref|NP_602368.1| heptaprenyl diphosphate synthase component II [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328953|ref|ZP_06871461.1| heptaprenyl diphosphate synthase component II [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19712760|gb|AAL93667.1| Heptaprenyl diphosphate synthase component II [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296153942|gb|EFG94752.1| heptaprenyl diphosphate synthase component II [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 326 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 91/185 (49%), Gaps = 11/185 (5%) Query: 48 LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 L GK +RS L+ CA L + N ++ A +E H SLIHDD+ +D+ RRGK Sbjct: 40 LSGKMLRSKLLLLCAFLGTNWKNNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 ++ +Y + A+ AG+ L+ F L + + +LS T G + + Sbjct: 98 VSIQGKYGKDAAVFAGDFLIARIF--YYGAVENLNEAVS---ILSKTVEYMCIGEIEQDL 152 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q E I E + F + KT AL A GA A S+ ++L F +NLG++FQL Sbjct: 153 CRYQ-ENISEKKYFENIERKTAALFQAASYIGAKEAGCSEEIIQKLELFVKNLGLMFQLK 211 Query: 225 DDLLD 229 DD+LD Sbjct: 212 DDILD 216 >gi|239983545|ref|ZP_04706069.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291455362|ref|ZP_06594752.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291358311|gb|EFE85213.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 297 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 6 GGKAVRPALALLSAEAAGAAPEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 63 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+AG+ L A EI+ T +L + + ++ GQ DI Sbjct: 64 KVHGPAQAILAGDALFALANEILLELGTLEAGRAARRLTTAS------RALIDGQAQDIS 117 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 118 YEHRERVSVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALERYGYHLGLAFQAVD 177 Query: 226 DLL 228 DLL Sbjct: 178 DLL 180 >gi|255575167|ref|XP_002528488.1| solanesyl diphosphate synthase, putative [Ricinus communis] gi|223532097|gb|EEF33905.1| solanesyl diphosphate synthase, putative [Ricinus communis] Length = 420 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 23/226 (10%) Query: 16 IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNVN 68 + + DDL L Q + N L+SA GGK++R FLV A + + Sbjct: 102 FEVVADDLQTLNQNLRLIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVARATAEVIGLK 161 Query: 69 HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 LT R+ IE IH SLIHDD+ +D +RRGK TVH Y AI+AG+ + Sbjct: 162 ELTIKHRRLAEIIEMIHTASLIHDDV--LDESNMRRGKETVHQLYGTRVAILAGDFMFAQ 219 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183 + ++ N+ + ++ L + ++ G++ F ++ + + Sbjct: 220 SSWYLA--------NLENIEVIKLISQV-IKDFASGEIKQASSLFDCDVELEEYLIKSYY 270 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + + AI + ++ E++ +G+NLG+ FQ+ DD+LD Sbjct: 271 KTASLIAASTKGAAIFSGVDRSVAEQMYEYGKNLGLSFQVVDDILD 316 >gi|311741756|ref|ZP_07715567.1| possible trans-hexaprenyltranstransferase [Aeromicrobium marinum DSM 15272] gi|311314762|gb|EFQ84668.1| possible trans-hexaprenyltranstransferase [Aeromicrobium marinum DSM 15272] Length = 332 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R +V CA + + +E H +L HDD+ MD RRG + + Sbjct: 50 GGKRFRPLVVALCAEFGDPAAPGVVPSAVVVELTHLATLYHDDV--MDEADKRRGALSAN 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-I 167 ++D AI+ G+ L A +I+S T + +R Q ++ GQ+ + I Sbjct: 108 ARWDNTLAILVGDYLFAQASDIVS---TLGPEAVRIQART-------FSRLVRGQIRETI 157 Query: 168 QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D Q ++ + KTG+L+ + GA+M+ A + L FGE +G FQL DD Sbjct: 158 GPGDGDPLQHYLGVVADKTGSLIATSARFGAMMSAAPVEVEHALTEFGERIGAAFQLRDD 217 Query: 227 LLDC 230 ++D Sbjct: 218 IIDV 221 >gi|297190552|ref|ZP_06907950.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC 25486] gi|297150531|gb|EDY61773.2| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC 25486] Length = 372 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 81 GGKAVRPALALLSAEAAGAAPEVGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 138 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T +L + + ++ GQ DI Sbjct: 139 KVHGPAQAILVGDALFAVANEVLLESGTVEAGRAARRLTTAS------RKLIDGQAQDIS 192 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A + + L +G +LG+ FQ D Sbjct: 193 FEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADERTADTLEAYGYHLGLAFQAVD 252 Query: 226 DLL 228 DLL Sbjct: 253 DLL 255 >gi|322513608|ref|ZP_08066706.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976] gi|322120568|gb|EFX92468.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976] Length = 331 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A+ + A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLIAVLAANALGYRGDKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S D++ ++S N +G + Q++++ Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTSV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+A ++ + L+ +G LG FQL DD+L Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|297842625|ref|XP_002889194.1| solanesyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata] gi|297335035|gb|EFH65453.1| solanesyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata] Length = 406 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L + LT R+ IE IH SLIHDD+ +D +RR Sbjct: 124 GGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRR 181 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TVH + A++AG+ + A ++ N+ + ++ L + ++ G Sbjct: 182 GKETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLQVIKLISQV-IKDFASG 232 Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F + ++ ++++ KT +L+ + + AI + + E++ FG+NLG+ Sbjct: 233 EIKQASSLFDCDAKLDDYLLKSFYKTASLVAASTKGAAIFSRVETDVTEQMYEFGKNLGL 292 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 293 SFQIVDDILD 302 >gi|169631007|ref|YP_001704656.1| polyprenyl-diphosphate synthase GrcC1 [Mycobacterium abscessus ATCC 19977] gi|169242974|emb|CAM64002.1| Probable polyprenyl-diphosphate synthase GrcC1 [Mycobacterium abscessus] Length = 328 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 18/188 (9%) Query: 49 GGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R F V + + ++ + GA E IH +L HDD+ MD RRG P+ Sbjct: 48 GGKRFRPLFTVLAAQTGPDPDNDEVILAGAVCELIHLATLYHDDV--MDEAQKRRGVPSA 105 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++ AI+AG+ LL A ++S T ++ I ++ L + GQM + Sbjct: 106 NARWGNNVAILAGDYLLATASRLVSRLGPTAVR--IVAETFAEL---------VTGQMRE 154 Query: 167 IQ--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 E DET+ ++ + KTG+L+ A GA+ + ++ ERL G +G FQ+ Sbjct: 155 TVGVPEGGDETEHYLKVIHEKTGSLIAAAGRFGAMTSRCDDDQIERLSRLGAIVGTAFQI 214 Query: 224 ADDLLDCE 231 +DD++D E Sbjct: 215 SDDIIDIE 222 >gi|189218934|ref|YP_001939575.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum V4] gi|189185792|gb|ACD82977.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum V4] Length = 394 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 25/208 (12%) Query: 39 LLSAIRYALLG-GKKIRSFLV---TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 ++ RY L GK+IR LV + + NHL + +E IH +L+HDD+ Sbjct: 96 IVPLFRYVLASEGKRIRPLLVLLSAKGSGGIGENHLY---LAVVVEMIHLATLVHDDI-- 150 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +D +RRG P+V ++ +++ G+ L A ++ + ++ S+ + + Sbjct: 151 LDGASMRRGIPSVTSRWGSEISVLLGDNLFAQALKVCC--------RLHPDIIQSVANGV 202 Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + + G++L + F + E + I +MKTG L CE A + AS+ E L Sbjct: 203 CV--VCSGEILQTRRRFDWNLLEEEYLKIIQMKTGELFRIPCELAARLNSASRTVSEALG 260 Query: 212 CFGENLGIIFQLADDLLD---CEEDLPK 236 FG+ LG +Q+ DD LD EE++ K Sbjct: 261 RFGQALGSSYQIYDDCLDLFGSEENVGK 288 >gi|325286900|ref|YP_004262690.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489] gi|324322354|gb|ADY29819.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489] Length = 325 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 20/214 (9%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFN---VNHLTALRVGAA 78 L + H LL+ I Y ++ GK++R V A L + VN T R + Sbjct: 17 LFEKKFHASMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKLVSGGKVNERT-YRGASV 75 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE IH +L+HDD+ +D+ RRG +V+ + A++ G+ LL+ ++S Sbjct: 76 IELIHTATLVHDDV--VDDSNKRRGFFSVNALWKNKIAVLVGDFLLSKGL-LLSI----- 127 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACES 195 DN L+ ++ + ++ M G++L I+ I E + I + KT L+ C Sbjct: 128 -DNGDFDLLKIIS--VAVREMSEGELLQIEKARKLDITEDVYYEIIRQKTATLIAACCSL 184 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA + ++ E R FGE +G+ FQ+ DDL D Sbjct: 185 GACSVNPDSDDVETFRKFGELIGMAFQIKDDLFD 218 >gi|262201095|ref|YP_003272303.1| trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247] gi|262084442|gb|ACY20410.1| Trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247] Length = 338 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 38/217 (17%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI- 79 DD++ + A+H+ A GGK+ R A + A + Sbjct: 38 DDVMTEAATHL--------------AKAGGKRFRPMFAVLAAQFGERPDADEVITSATVV 83 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH +L HDD+ MD +RRG P+ + ++ AI++G+ L A ++S T Sbjct: 84 EMIHLATLYHDDV--MDEAPLRRGAPSANARWSNSVAILSGDFLFARASRLVS---TLGP 138 Query: 140 DNIR------SQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 D +R ++L+ + +G++ GG ++ + KTG+L+ A Sbjct: 139 DAVRIIAETFAELVTGQMRETVGVKA--GGDPIE---------HYLRVVWEKTGSLIAAA 187 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA+ + A+ ++ ERL G+ +G FQ++DD++D Sbjct: 188 GRFGAMASGATPDDVERLSRIGDVVGTAFQVSDDIID 224 >gi|227431314|ref|ZP_03913367.1| trans-hexaprenyltranstransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352907|gb|EEJ43080.1| trans-hexaprenyltranstransferase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 332 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 16/196 (8%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +AIR GK +R L + L + + A+ +GA+IE +H +LIHDD+ +D Sbjct: 40 NAIRSQASAGKLVRPALTLLFSELTDAPYNQKAIVLGASIELLHLATLIHDDI--IDESK 97 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG+ ++ + + TA+ AG+ LLT +++ DNI++ L+L L+ + Sbjct: 98 LRRGQDSIQAHFGKDTAVYAGDYLLTGMLSLLND-----ADNIQAN-KLALE---ALRNI 148 Query: 160 LGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGE 215 L G++ + ++ +T KT AL + GA + ++ + + GE Sbjct: 149 LFGELTQKHNRYLTDTSFDNCLTQITGKTAALFKLSVLFGATSSDGVSSQLLDVVGKLGE 208 Query: 216 NLGIIFQLADDLLDCE 231 NLGI FQL DD LD E Sbjct: 209 NLGIAFQLLDDYLDFE 224 >gi|71744686|ref|XP_826973.1| farnesyl pyrophosphate synthetase [Trypanosoma brucei TREU927] gi|70831138|gb|EAN76643.1| farnesyl pyrophosphate synthetase, putative [Trypanosoma brucei] Length = 359 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 22/202 (10%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSM 95 L++ + +AL+ + F ++ SL ++ T LR+G E IH +L+HDD+ + Sbjct: 73 LVAMMAHALVPPHMSQQFQASDIGSLDDIPSGTIRPFLRLGEVTELIHTAALVHDDV--I 130 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTH 152 D+ +RRGKP +H +D A++AG+ LL A I+S P+ + + Sbjct: 131 DDSEMRRGKPALHCVHDVKRAVLAGDFLLARASLWIASLCVPR------------IVVLM 178 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 L+ + G+M+ ++ F D + KTG+L+ + + A++A S + E Sbjct: 179 TTALEDLTRGEMMQMEGCF-DLERYEEKTYCKTGSLIANSLAATAVLADPSNSAHEVAAG 237 Query: 213 -FGENLGIIFQLADDLLDCEED 233 +G LGI FQ+ DD LD D Sbjct: 238 EYGRRLGIAFQIVDDCLDITGD 259 >gi|288928710|ref|ZP_06422556.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 317 str. F0108] gi|288329694|gb|EFC68279.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 317 str. F0108] Length = 325 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ F A +E +H SL+HDD+ +D RRG+ +V+ Sbjct: 44 GGKRMRPILILLMTKSFGKVTSVAQYAAVGLELLHTASLVHDDV--VDESGERRGQASVN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLD 166 Y+ A++ G+ +L+ A +++ +T D + ++L +L++ LQ + + Sbjct: 102 ASYNNKVAVLVGDYILSTA--LLNIARTNDCDIVCDLAELGRTLSNGEILQ------LTN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 I + E F + + KT AL GA A + E R FG N+G+IFQ+ DD Sbjct: 154 IANTNFSEEVYFEVIRQKTAALFEACAVIGAKAGGADRQAVEAARAFGRNVGVIFQIRDD 213 Query: 227 LLD 229 + D Sbjct: 214 IFD 216 >gi|206890930|ref|YP_002249297.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742868|gb|ACI21925.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 322 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 17/195 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A L + + A IE +H SL+HDD+ +D +RRG+ + + Sbjct: 43 GGKRLRPLFLLISADLAGYREYKRVIMAAVIEALHTASLLHDDV--VDEAELRRGQVSAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++ G+ L A + + ++ Q+M +L+ M G++L + Sbjct: 101 RIWGNQVTVLLGDYLYAKALHVSVAQESL-------QIMEALSW--ATSQMAEGEILQLM 151 Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D I + I KT L+ AC I+A S+ + + L FG N+G+ FQ+ D Sbjct: 152 KAGDPTITFNEYIKIITGKTAGLIRAACRIAGILAKLSEEKIQALTDFGHNIGVAFQMID 211 Query: 226 DLLDC---EEDLPKK 237 D+LD E +L KK Sbjct: 212 DILDYVADESELGKK 226 >gi|94312038|ref|YP_585248.1| polyprenyl synthetase [Cupriavidus metallidurans CH34] gi|93355890|gb|ABF09979.1| octaprenyl diphosphate synthase [Cupriavidus metallidurans CH34] Length = 325 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A F+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 46 GGKRLRPVILLLSARAFDYEGHRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTAN 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ + +R +LS N+ +G + Q+L++ Sbjct: 104 AVFGNAASVLVGDFLYSRAFQMMVEAGS-----MRIMEILSNATNVIAEGEVL-QLLNMH 157 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + KT L + + GA++A A +E +G +G FQL DD+L Sbjct: 158 DPEVTVERYLQVIRYKTAKLFEASAQLGAVLAGADAEMEEAAAEYGRRIGTAFQLIDDML 217 Query: 229 D 229 D Sbjct: 218 D 218 >gi|302341992|ref|YP_003806521.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075] gi|301638605|gb|ADK83927.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075] Length = 348 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 16/184 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A V R A E +H +L+HDD+ +D +RRG+P Sbjct: 68 GGKRLRPVLFMLAAQ--AVGGAGDFRRAAIFEYLHAATLLHDDV--IDEAGLRRGRPAAR 123 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 Y I+ G+ L + ++ + + + D+ Q + T + M GQ+L++ Sbjct: 124 KLYGNEAVILVGDFLFSKSYSLAA----EEPDHRFIQALTDCTTH-----MAEGQVLELL 174 Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + + + KT L+ AC+ GAI A AS + L +G +LG+ FQL D Sbjct: 175 RTDDLELSRQKYLEVIVAKTAVLLAAACQMGAIHAGASPEVENALYRYGLSLGVAFQLVD 234 Query: 226 DLLD 229 D LD Sbjct: 235 DALD 238 >gi|296804410|ref|XP_002843057.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma otae CBS 113480] gi|238845659|gb|EEQ35321.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma otae CBS 113480] Length = 488 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RR + ++ + A++AG+ LL A I+ Sbjct: 230 RLAEITELIHTASLLHDDV--IDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIA- 286 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK--M 183 +L+D +L+ ++ N ++ G+ + +++ +DE+ + +QK + Sbjct: 287 ---RLRDPEVIELLGTVMAN-----LVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYL 338 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K+ +L+ +C + A++ + E FG NLG+ FQL DD+LD Sbjct: 339 KSASLISKSCRAAALLNQSGPEVAEAAYLFGRNLGLAFQLVDDMLD 384 >gi|114324644|gb|ABI63627.1| solanesyl diphosphate synthase [Solanum lycopersicum] Length = 398 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 23/226 (10%) Query: 16 IDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNVN 68 + + DDLL + ++ N L+SA GGK++R FLV+ A + + Sbjct: 80 FEVVADDLLTLNKNLHNIVGAENPVLMSAAEQIFGAGGKRVRPALVFLVSRATAEMSGLK 139 Query: 69 HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 LT R+ IE IH SLIHDD+ +D RRGK T+H Y A++AG+ + Sbjct: 140 ELTTNHRRLAEIIEMIHTASLIHDDV--LDESDTRRGKETIHQLYGTRVAVLAGDFMFAQ 197 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183 + ++ N+ + ++ L + ++ G++ + F + + + Sbjct: 198 SSWYLA--------NLENLEVIKLISQV-IKDFASGEIKQASNLFDCDVGLDEYLLKSYY 248 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + + AI + + E++ +G NLG+ FQ+ DD+LD Sbjct: 249 KTASLIAASTKGAAIFSEVGSDISEQMFQYGRNLGLSFQIVDDILD 294 >gi|182412460|ref|YP_001817526.1| polyprenyl synthetase [Opitutus terrae PB90-1] gi|177839674|gb|ACB73926.1| Polyprenyl synthetase [Opitutus terrae PB90-1] Length = 341 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 15/184 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK+IR LV + N + A +RV A +E +H +L+HDD+ MD +RR + T Sbjct: 57 GKRIRPALVFLGG--WRGNGMVAPDLVRVAAVVELVHLATLVHDDI--MDGAEVRRNRRT 112 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 ++ A++ G+ L +A + + P T++ + ++ I Q L Sbjct: 113 AAREFGAAGAVLLGDALFAHALHLAAQFPTTEVCAAVSESTRRVVSGEIV-------QTL 165 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + F I +KT L +C GA +A ++ E + FGE+LG+ +Q+ D Sbjct: 166 RRGTTNVSRADYFRIIDLKTAELFRVSCFLGARLAGSAPGYVEAVSRFGEHLGVAYQIYD 225 Query: 226 DLLD 229 DL D Sbjct: 226 DLAD 229 >gi|261331244|emb|CBH14234.1| farnesyl pyrophosphate synthetase, putative [Trypanosoma brucei gambiense DAL972] Length = 359 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 22/202 (10%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSM 95 L++ + +AL+ + F ++ SL ++ T LR+G E IH +L+HDD+ + Sbjct: 73 LVAMMAHALVPPHMSQQFQASDIGSLDDIPSGTIRPFLRLGEVTELIHTAALVHDDV--I 130 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTH 152 D+ +RRGKP +H +D A++AG+ LL A I+S P+ + + Sbjct: 131 DDSEMRRGKPALHCVHDVKRAVLAGDFLLARASLWIASLCVPR------------IVVLM 178 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 L+ + G+M+ ++ F D + KTG+L+ + + A++A S + E Sbjct: 179 TTALEDLTRGEMMQMEGCF-DLERYEEKTYCKTGSLIANSLAATAVLADPSNSAHEVAAG 237 Query: 213 -FGENLGIIFQLADDLLDCEED 233 +G LGI FQ+ DD LD D Sbjct: 238 EYGRRLGIAFQIVDDCLDITGD 259 >gi|114049916|emb|CAK50933.1| putative geranylgeranyl diphosphate synthase [Streptomyces ambofaciens] gi|114050138|emb|CAK51171.1| putative geranylgeranyl diphosphate synthase [Streptomyces ambofaciens] Length = 357 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 30/239 (12%) Query: 14 KRIDTILDDLLLQTA-SHMQTQHNDRLLSAIR-YALLGGKKIRSFL--VTECASLFNVNH 69 +++D +L+D L A + + H + + +R + GGK++R+ L V A+ + + Sbjct: 18 EQVDAVLEDFLEDKAGAAARRSHPPEVANTLRAFLAAGGKRVRALLCVVGWHAAGGSEDR 77 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------------QYDEVTA 116 LRV A++E ++LIHDD+ MD+ +RRG+P VH + A Sbjct: 78 AAVLRVAASLELFVAFALIHDDI--MDDSAVRRGRPAVHRALCTRLGQSSRAERLGAGGA 135 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFI 172 ++ GN L +A E++ + L R + + ++ L+ ++ GQ LD+ D+ I Sbjct: 136 LLVGNLALIWAQELLHTADLPL----RRRRTVHALYDAMLEEVMYGQYLDVMGTGPDDDI 191 Query: 173 DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 D I + KT A + + GA +A A G LG FQ+ DDLLD Sbjct: 192 D--AALRIARYKTATATVERPLQLGAAVAGADDTTVNLCTALGLPLGEAFQIRDDLLDV 248 >gi|222834545|gb|EEE73022.1| predicted protein [Populus trichocarpa] Length = 309 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A F+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 30 GGKRLRPVILLLSARAFDYEGHRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ + +R +LS N+ +G + Q+L++ Sbjct: 88 AVFGNAASVLVGDFLYSRAFQMMVEAGS-----MRIMEILSNATNVIAEGEVL-QLLNMH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + KT L + + GA++A A +E +G +G FQL DD+L Sbjct: 142 DPEVTVERYLQVIRYKTAKLFEASAQLGAVLAGADAEMEEAAAEYGRRIGTAFQLIDDML 201 Query: 229 D 229 D Sbjct: 202 D 202 >gi|148274072|ref|YP_001223633.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147832002|emb|CAN02974.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 340 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 31/204 (15%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R +V L + A VGAA E +H ++HDD+ +D + RRG P V Sbjct: 36 GGKRFRPRMVMAAYDGLGGQDVQAAAHVGAAFEMLHTALIVHDDV--IDRDFTRRGGPNV 93 Query: 108 HIQYDEVT-----------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 Y ++ A+IAG+ L A+ +I + + ++D RS LM L Sbjct: 94 SGAYRDIATTQGLPQPLAEHRGMSAAVIAGDLALVNAYRLIDA--SGVRDLTRSHLMEIL 151 Query: 151 THNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFAC--ESGAIMAHASQ 204 + G+++D++ + ++ ++++KT A+ F ++GA++A AS Sbjct: 152 DDAVFASA--AGELIDVEFSLTADVPSVDEILRMERLKT-AVYSFEAPLQAGAVLAGASP 208 Query: 205 NEKERLRCFGENLGIIFQLADDLL 228 L FG ++GI +Q+ DD+L Sbjct: 209 AIVSALGDFGRDIGIAYQVVDDVL 232 >gi|29827670|ref|NP_822304.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] gi|29604770|dbj|BAC68839.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] Length = 344 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 21/193 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A + A+E +H +SL+HDD+ MD +RRG+P + Sbjct: 63 GKGVRQALAVLGAEAAGGPAEAGVPAAVAVELVHTFSLLHDDI--MDGDAMRRGRPALWK 120 Query: 110 QYDEVTAIIAGNGLLTYAFEII---SSP------KTQLKDNIRSQLMLSLTHNIGLQGML 160 Y A++AG+ L A + + S+P L D +R Q +L Sbjct: 121 AYGTGPAVLAGDALFALAVQTLTTASAPGAAHRLSAALGDLVRGQA----------DDLL 170 Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 E + + + + KTG+L+ A GA +A A + L G +LG+ Sbjct: 171 FAHRPWTGPEAVSVAEYEAMAEHKTGSLLGCALALGAHLAGAPEETAAVLDRTGRHLGVA 230 Query: 221 FQLADDLLDCEED 233 FQ+ DDLL D Sbjct: 231 FQIVDDLLGIWGD 243 >gi|157960679|ref|YP_001500713.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345] gi|157845679|gb|ABV86178.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345] Length = 323 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLSILAARAIDYKGDSHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRKTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+L+ +++ T+ + +L Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELRSLDVLEILADATNVLAEGEVL--QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A + + L +G+ LG FQL DDLL Sbjct: 155 DPDTTEDSYMRVIYCKTAKLFEAATRLAGLLADSPIEVQTALADYGKYLGTAFQLTDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTAD 219 >gi|126465401|ref|YP_001040510.1| polyprenyl synthetase [Staphylothermus marinus F1] gi|126014224|gb|ABN69602.1| Polyprenyl synthetase [Staphylothermus marinus F1] Length = 365 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 100/223 (44%), Gaps = 43/223 (19%) Query: 45 YALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 Y L GGK++R+FLV + N++ + L G IE + Y L+HDD+ MD Sbjct: 47 YTLRGGKRLRAFLVLIGYWSRKWGYGNIDSIKYLMAG--IEFLQSYLLVHDDI--MDEDE 102 Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYA---FEIISSPKTQLKD 140 IRRG PTVH+ +D AII G+ L + A F ++ P LK+ Sbjct: 103 IRRGGPTVHVWFDRKCREEGLISRCKHYGVSQAIIVGDYLESLAVSMFTRLNLPDYALKE 162 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMC-FACE 194 I+ T+ G++ + GQ LD+ + + E V+ I +KT + Sbjct: 163 LIK-------TYTRGVRLVAYGQFLDVLIANTPLKKVSEDDVYNIHMLKTASYTVELPLH 215 Query: 195 SGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLPK 236 GAI + NE L + GI FQL DD+L D PK Sbjct: 216 LGAIASLMYNNELLMELSQYALPAGIAFQLQDDILGLYGD-PK 257 >gi|86134465|ref|ZP_01053047.1| polyprenyl synthetase [Polaribacter sp. MED152] gi|85821328|gb|EAQ42475.1| polyprenyl synthetase [Polaribacter sp. MED152] Length = 325 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 20/203 (9%) Query: 39 LLSAIRYALL--GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 LL+ I Y ++ GK++R FLV + S + T R + +E IH +L+HDD+ Sbjct: 32 LLNRITYYIVRRKGKQMRPMFVFLVAKMVSNGGFDERT-YRGASVVELIHTATLVHDDV- 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +D+ RRG +++ + A++ G+ LL+ ++S DN L+ ++ Sbjct: 90 -VDDSNRRRGFFSINALWKNKIAVLVGDFLLSKGL-LLSI------DNEDFDLLKLIS-- 139 Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 I ++ M G++L I+ I E F I + KT L+ C GA A+Q+ +++ Sbjct: 140 IAVREMSEGELLQIEKARKLDITEDIYFDIIRQKTATLIAACCGIGAASVGANQDTVQQM 199 Query: 211 RCFGENLGIIFQLADDLLDCEED 233 R FGE +GI FQ+ DDL D ++ Sbjct: 200 RKFGEYIGIAFQIKDDLFDYSDE 222 >gi|125973083|ref|YP_001036993.1| trans-hexaprenyltranstransferase [Clostridium thermocellum ATCC 27405] gi|125713308|gb|ABN51800.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum ATCC 27405] Length = 318 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 21/223 (9%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +LL+ + +RLL+ +++ GGK++R V + N + AAIE Sbjct: 14 VLLEKFIQKNIRSRNRLLNEAVSSIVKSGGKRLRPAFVILASQFGKYNRKKVIPAAAAIE 73 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H +LIHDD+ +D RRG+ T+ ++ A+ G+ L T A +++ Sbjct: 74 ILHTATLIHDDV--VDRTKFRRGQVTISEKFGVDMAVYVGDYLYTKAVLLLAG------- 124 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALMCFACESGA 197 N+ + + L G++ + G++ Q ++ +T V+ K KT L AC GA Sbjct: 125 NVPEKRLSILAK--GIKAICEGEVDQYQHKYSIDTSVYTYLKRIGRKTAVLFSAACALGA 182 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDL-----LDCEEDLP 235 +A Q L G G+ FQ+ DD+ EED P Sbjct: 183 YIAKCPQEVSRSLVKLGLYYGMAFQIKDDINNYTKAQYEEDKP 225 >gi|297159526|gb|ADI09238.1| putative polyprenyl diphosphate synthase [Streptomyces bingchenggensis BCW-1] Length = 336 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVLLAAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVASAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A++ G+ L A I++ + +R Q + ++ GQ+L+ Sbjct: 111 ARWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILETA 160 Query: 169 D--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D + ++ + + KTG+L+ + GA+M+ A ++ L +GE LGI FQLAD Sbjct: 161 GPRDGQDPIEHYLDVLQGKTGSLVAVSGRFGAMMSGADESVVSILTQYGERLGIAFQLAD 220 Query: 226 DLLDCEED 233 D+LD D Sbjct: 221 DVLDIASD 228 >gi|58040424|ref|YP_192388.1| decaprenyl diphosphate synthase [Gluconobacter oxydans 621H] gi|58002838|gb|AAW61732.1| Decaprenyl diphosphate synthase [Gluconobacter oxydans 621H] Length = 315 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 18/192 (9%) Query: 49 GGKKIRSFLVTECASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 GGK++R L + L N H+ + A +E IH +L+HDD+ +D +R Sbjct: 30 GGKRLRPLLTLASSRLCGYKSTPENQRHVG---LAACVEFIHTATLLHDDV--VDESNLR 84 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RG + + + +++ G+ L +F+++++ + I S ++ LQ + Sbjct: 85 RGLASANAVFGNKASVLVGDFLFARSFQLMTADGSLKVMAILSDASATIAEGEVLQMVTQ 144 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + D +++ + KT AL AC GA++A + E+ L FG NLG+ F Sbjct: 145 NDLSTPVDRYLE------VIHGKTAALFAAACRVGAVVADRPEAEELALDRFGTNLGMAF 198 Query: 222 QLADDLLDCEED 233 QL DD LD D Sbjct: 199 QLVDDALDYAAD 210 >gi|116327301|ref|YP_797021.1| geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332078|ref|YP_801796.1| geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120045|gb|ABJ78088.1| Geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125767|gb|ABJ77038.1| Geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 319 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 16/197 (8%) Query: 38 RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 ++LS I+ + GGK++R L L + L VGA +E IH SL+HDD+ + Sbjct: 27 KILSEIKTYTIRSGGKRLRPILHYCLCQLLGYSGKHWLDVGAIVELIHAASLLHDDV--V 84 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM--LSLTHN 153 D RRG+ +V ++ TAI+AG+ LL + ++ +I +Q++ LS++ Sbjct: 85 DEAETRRGQQSVGSKFGNKTAILAGDYLLACGIDHLNDLGYPELMDIFTQVIKDLSISEL 144 Query: 154 IGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 I ++ ++ LDI ++ I KT +L S I++ + EK++LR Sbjct: 145 IQMEWEKNPKITLDIYNK---------IAYGKTSSLFGAVGVSAGILSDKNDKEKKKLRQ 195 Query: 213 FGENLGIIFQLADDLLD 229 FG +LG FQ DD +D Sbjct: 196 FGIDLGSFFQKKDDAID 212 >gi|300117458|ref|ZP_07055248.1| heptaprenyl diphosphate synthase component II [Bacillus cereus SJ1] gi|298725293|gb|EFI65945.1| heptaprenyl diphosphate synthase component II [Bacillus cereus SJ1] Length = 269 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 18/182 (9%) Query: 62 ASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A F L A++ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G Sbjct: 4 AGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTG 61 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFM 179 + L + E I++ + + +L+H I + G++ I+D++ D+ Sbjct: 62 DYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQIKDKYNYDQNLRTY 112 Query: 180 IQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDL 234 ++ K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD EE L Sbjct: 113 LRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKL 172 Query: 235 PK 236 K Sbjct: 173 GK 174 >gi|237742642|ref|ZP_04573123.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13] gi|229430290|gb|EEO40502.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13] Length = 326 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 11/185 (5%) Query: 48 LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 L GK +RS L+ CA L + N ++ A +E H SLIHDD+ +D+ RRGK Sbjct: 40 LSGKMLRSKLLLLCAFLGSNWKDNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 ++ +Y + A+ AG+ L+ F L + + +LS T G + + Sbjct: 98 VSIQGKYGKDAAVFAGDFLIARIF--YYGAMENLNETVS---ILSKTVEYMCIGEIEQDL 152 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q + I E + F + KT AL A GA S+ ++L+ F +NLG++FQL Sbjct: 153 CRYQKD-ISEKKYFENIERKTAALFQAASYIGAKETGCSEEIIQKLKLFVKNLGLMFQLK 211 Query: 225 DDLLD 229 DD+LD Sbjct: 212 DDILD 216 >gi|37678653|ref|NP_933262.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] gi|37197393|dbj|BAC93233.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] Length = 306 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 26 GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 83 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L +++ ++S NI +G + Q+++ Sbjct: 84 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSDAVNIIAEGEVL-QLMNCN 137 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A + L+ +G+ LG FQL DD++ Sbjct: 138 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 197 Query: 229 DCEED 233 D D Sbjct: 198 DYTSD 202 >gi|154335826|ref|XP_001564149.1| polyprenyl synthase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061183|emb|CAM38205.1| putative polyprenyl synthase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 742 Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 20/207 (9%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L +R + GGK RS ++ C + + + R A E +H SLI DD+ Sbjct: 433 DTLFRPVRSMIDRGGKSWRSLVLVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDI--Q 490 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRG+ VH++Y TAI AG+ F + + Q ++ + L ++ Sbjct: 491 DNSMVRRGEKCVHVEYGVATAINAGSACY---FMAPRAARIQDLPPEKASRIYQLYFDVL 547 Query: 156 LQGMLGGQMLDIQD---------EFIDETQVF----MIQKMKTGALMCFACESGAIMAHA 202 L G GQ LDI E D + +F I KTG + C ++ A Sbjct: 548 LAGH-AGQGLDIYGLDYLMPKVIETGDVSTLFDALDAIHTYKTGGAVGTLCAMACVLCEA 606 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD 229 E + FG LG+ FQ+ DD L+ Sbjct: 607 PAALSEAVEKFGLTLGLAFQIVDDALN 633 >gi|313680555|ref|YP_004058294.1| polyprenyl synthetase [Oceanithermus profundus DSM 14977] gi|313153270|gb|ADR37121.1| Polyprenyl synthetase [Oceanithermus profundus DSM 14977] Length = 319 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 20/226 (8%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL-VTECASLF 65 S L E + + L LL +Q +D L++A GGK+IR L + +L Sbjct: 8 SALPEPGEAFERRLRALLRSDVEFIQLIEDD-LIAA------GGKRIRPRLALLASRALG 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V H + + A+E +H +L+HDDL +D+ RRG+ +Y ++++G+ LL+ Sbjct: 61 GVPH--EMELALAVELLHSATLLHDDL--VDDAETRRGREAAFRKYGNAVSVLSGDYLLS 116 Query: 126 YA-FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 F + + + +L L + +L Q Q+ E Q + I + K Sbjct: 117 RVLFLLAETGRIEL-----VHLFAEAARQLAEGEVLQFQAAAYQE--YSEAQYYRIIESK 169 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 T ALM A E A++ A + + L +G G+ FQ+ DD LD Sbjct: 170 TAALMRAATEGAALLGRAPETLRMALVTYGREYGMAFQMRDDYLDL 215 >gi|260910759|ref|ZP_05917413.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 472 str. F0295] gi|260635120|gb|EEX53156.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 472 str. F0295] Length = 325 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ F A +E +H SL+HDD+ +D RRG+ +V+ Sbjct: 44 GGKRMRPILILLMTKSFGKVTPVAQYAAVGLELLHTASLVHDDV--VDESGERRGQASVN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLD 166 Y+ A++ G+ +L+ A +++ +T D + ++L +L++ LQ + + Sbjct: 102 ASYNNKVAVLVGDYILSTA--LLNIARTDDCDIVCDLAELGRTLSNGEILQ------LTN 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 I + E F + + KT AL GA A + E R FG N+GIIFQ+ DD Sbjct: 154 IVNTNFSEEVYFEVIRQKTAALFESCAVIGAKAGGADKQAVEAARAFGRNVGIIFQIRDD 213 Query: 227 LLD 229 + D Sbjct: 214 IFD 216 >gi|295835333|ref|ZP_06822266.1| polyprenyl synthetase [Streptomyces sp. SPB74] gi|197696404|gb|EDY43337.1| polyprenyl synthetase [Streptomyces sp. SPB74] Length = 390 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 14/192 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 G ++ R LV L + + AAIE H SL+ DD+ D +RRG P H Sbjct: 88 GRRRWRPGLVAAAIDLLGGDSEHYGPLCAAIELAHTGSLMVDDV--QDGSPLRRGSPAAH 145 Query: 109 IQYDEVTAIIAGNGLLTYAFE----IISSPKTQLKDNIRSQLMLSLTHNIGLQGM-LGGQ 163 + + TA+ AG +AF+ + ++ L +R + +L QG+ + G Sbjct: 146 LVFGTATALNAGTHAY-FAFDRAVRLTAAHDPALAGRLRDVFLAALRSAHAGQGLDITGH 204 Query: 164 MLDIQDEFI--DETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 ++ + D V + ++KTGA+ CE+ A++ A + L FGE L Sbjct: 205 RAEMAEAVATGDARHVLALVRLTHRLKTGAMAALGCETAALVTAADGPRRRALAAFGEAL 264 Query: 218 GIIFQLADDLLD 229 G +Q DD+ D Sbjct: 265 GTAYQFTDDVAD 276 >gi|331699298|ref|YP_004335537.1| trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans CB1190] gi|326953987|gb|AEA27684.1| Trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans CB1190] Length = 331 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A + N ++ + A +E +H +L HDD+ MD+ +RRG + Sbjct: 53 GGKRFRPLFTLLSAQVGPNPDNDDVITAAAVVELVHLATLYHDDV--MDSATMRRGAESA 110 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++D AI+ G+ L +A +++ D +R +++ T ++ GQM + Sbjct: 111 NSRWDNTVAILTGDFLFAHASRLVADLG---PDAVR---IIAET----FAELVTGQMRET 160 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + E D + ++ + KTG+L+ + G + + + + E LR FG +G FQ++ Sbjct: 161 RGPAEGDDPVEHYLRVVAEKTGSLIATSGRYGGMFSGCTPEQTESLRRFGATIGTAFQIS 220 Query: 225 DDLLD 229 DD++D Sbjct: 221 DDVID 225 >gi|325295651|ref|YP_004282165.1| trans-hexaprenyltranstransferase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066099|gb|ADY74106.1| Trans-hexaprenyltranstransferase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 324 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L L + V +E +H +L+HDD+ +D +RRG+ + + Sbjct: 43 GGKRVRPGLTIISGKLVEAPLERLIPVATVMEYMHTATLLHDDI--VDGAKLRRGRLSAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ + A I++ + +Q + Q M G++L ++ Sbjct: 101 EVFGNDVAVLVGDYMFAKAIYILAVYGGDKVLKVAAQTV---------QEMAEGELLQLE 151 Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + E + F I KT +L+ CE G I+ A + E++ L+ +G+ +G FQL D Sbjct: 152 KIGDINLTEEEYFDIIYRKTASLLSTCCEVGGIVGEAREEERKALKNYGKFIGYAFQLVD 211 Query: 226 DLLD 229 D D Sbjct: 212 DAFD 215 >gi|291294791|ref|YP_003506189.1| Dimethylallyltranstransferase [Meiothermus ruber DSM 1279] gi|290469750|gb|ADD27169.1| Dimethylallyltranstransferase [Meiothermus ruber DSM 1279] Length = 319 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 33/193 (17%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV + +L V + A+ + A+E +H SL+HDDL +D+ RRGK Sbjct: 43 GGKRVRPRLVFLASNALGGVPY--AMELALAVELLHSASLLHDDL--VDDAETRRGKEAA 98 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 +Y ++++G+ LL+ R +L+ T + L M + Sbjct: 99 FRKYGNAVSVLSGDYLLS-----------------RLMALLAQTGRMELVAMFAETARQL 141 Query: 168 QDEFIDETQVFMIQKM-----------KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 + + + QV + KT ++M ACE A++ A E+E L FG Sbjct: 142 SEAEVLQFQVAALHDYSLENYERIIDGKTASVMRVACEGAAVLGDAPPAEREALARFGSF 201 Query: 217 LGIIFQLADDLLD 229 G FQ+ DD LD Sbjct: 202 YGQAFQMRDDYLD 214 >gi|261250197|ref|ZP_05942773.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] gi|260939313|gb|EEX95299.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] Length = 345 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 10/206 (4%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 H Q + L++ + + ++ GGK+IR L A A IE IH +L Sbjct: 44 HAQLNSDVSLINQLGFYIVSGGGKRIRPLLAVLSARALGYQGEAHTTSAAFIEFIHTATL 103 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ + Sbjct: 104 LHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SLKILKL 156 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +S N+ +G + Q+++ + E + KT L A + GAI+ A ++ + Sbjct: 157 MSDAVNVIAEGEVQ-QLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPEDVE 215 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L+ +G+ LG FQL DD++D D Sbjct: 216 LALQNYGKYLGTAFQLIDDVMDYTSD 241 >gi|315127756|ref|YP_004069759.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas sp. SM9913] gi|315016270|gb|ADT69608.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas sp. SM9913] Length = 323 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + IE IH +L+HDD+ +D +RRG PT + Sbjct: 43 GGKRVRPMLAILAAKALGYQGKDHITLATIIEFIHTATLLHDDV--VDESNLRRGTPTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ +++ G+ + T +F++ + K Q+ Q++ T+ I +L Q+++ Sbjct: 101 AEFGNAASVLVGDFIYTRSFQLMVGLGKMQIM-----QVLADATNIIAEGEVL--QLMNC 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E + KT L A AI+ + E L +G +LG FQL DD+ Sbjct: 154 NDPDTTEASYMQVIYSKTAKLFEAATGLAAIITDQDDSVLEALNLYGMHLGTAFQLVDDV 213 Query: 228 LDCEED 233 LD D Sbjct: 214 LDYNAD 219 >gi|327274790|ref|XP_003222159.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Anolis carolinensis] Length = 350 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 24/200 (12%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N +H ++ V A+ E IH SL+HDD+ +D+ RR Sbjct: 68 GKAFRPMIVVLMARACNFHHKSSGEVQASQRSIALIAEMIHTASLVHDDV--IDDANSRR 125 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L A + ++ I + ++S+ ++ ++ G Sbjct: 126 GKLTVNHVWGERKAVLAGDFILAVASQTLA--------RIGNTTIVSVLTR-AIEDLVRG 176 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +I+A E +G+N+GI Sbjct: 177 EFLQLGSKENENERFAHYLEKTFKKTASLIAHSCKAVSILACPDPKVHEIAYQYGKNIGI 236 Query: 220 IFQLADDLLD---CEEDLPK 236 FQL DD+LD C E L K Sbjct: 237 AFQLIDDVLDFTSCSEQLGK 256 >gi|227530643|ref|ZP_03960692.1| trans-hexaprenyltranstransferase [Lactobacillus vaginalis ATCC 49540] gi|227349424|gb|EEJ39715.1| trans-hexaprenyltranstransferase [Lactobacillus vaginalis ATCC 49540] Length = 325 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 16/203 (7%) Query: 33 TQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLI 88 T +N L +A++ A GGK +R A L N + +++ +++E +H +LI Sbjct: 28 TVNNTDLQAALKQMASKGGKYLRPAFCLTFARLGGKNSWNSSKLIKIASSLEILHMATLI 87 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D+ RRG P++ + + TA+ +G+ L T F++ L + + S L Sbjct: 88 HDDV--IDDSPERRGAPSIQKAFGKDTAVYSGDLLFTVFFDL-------LVETMESSPYL 138 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNE 206 + T+ ++ +L G++ + + ++ + + + KT L A + GA A Sbjct: 139 A-TNAQAMRKILAGELGQMNQRYQQQSLLEYYRNINGKTATLFSLAAQEGAHFGGADART 197 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 + G+N+GI FQ+ DD+LD Sbjct: 198 VHLAKHIGQNIGITFQILDDMLD 220 >gi|256004586|ref|ZP_05429564.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum DSM 2360] gi|281417278|ref|ZP_06248298.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum JW20] gi|255991458|gb|EEU01562.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum DSM 2360] gi|281408680|gb|EFB38938.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum JW20] gi|316940696|gb|ADU74730.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313] Length = 318 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 21/223 (9%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +LL+ + +RLL+ +++ GGK++R V + N + AAIE Sbjct: 14 VLLEEFIQKNIRSRNRLLNEAVSSIVKSGGKRLRPAFVILASQFGKYNRKKVIPAAAAIE 73 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H +LIHDD+ +D RRG+ T+ ++ A+ G+ L T A +++ Sbjct: 74 ILHTATLIHDDV--VDRTKFRRGQVTISEKFGVDMAVYVGDYLYTKAVLLLAG------- 124 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALMCFACESGA 197 N+ + + L G++ + G++ Q ++ +T V+ K KT L AC GA Sbjct: 125 NVPEKRLSILAK--GIKAICEGEVDQYQHKYSIDTSVYTYLKRIGRKTAVLFSAACALGA 182 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDL-----LDCEEDLP 235 +A Q L G G+ FQ+ DD+ EED P Sbjct: 183 YIAKCPQEVSRSLVKLGLYYGMAFQIKDDINNYTKAQYEEDKP 225 >gi|76363949|gb|ABA41594.1| geranylgeranyl pyrophosphate synthetase-like protein [Solanum lycopersicum] Length = 206 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 42 AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++RY+LL GGK+IR L L TA+ A+E IH SLIHDDLP MDN + Sbjct: 99 SMRYSLLAGGKRIRPMLCIAACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL 158 Query: 101 RRGKPTVHIQYDE 113 RRGKPT H Y E Sbjct: 159 RRGKPTNHKIYGE 171 >gi|239945641|ref|ZP_04697578.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] gi|239992111|ref|ZP_04712775.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 11379] Length = 356 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 65 GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 122 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A++++ T +L + ++ GQ DI Sbjct: 123 KVHGPAQAILVGDALFALAYDLLLELGTVEAGRAARRL------TTATRKLIDGQAQDIS 176 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 177 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVD 236 Query: 226 DLL 228 DLL Sbjct: 237 DLL 239 >gi|225011597|ref|ZP_03702035.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-2A] gi|225004100|gb|EEG42072.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-2A] Length = 325 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 36/195 (18%) Query: 50 GKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R V A L VN T R + IE IH +L+HDD+ +D+ RRG + Sbjct: 45 GKQMRPMFVFLVAKLVGNGKVNERT-YRGASVIELIHTATLVHDDV--VDDSNKRRGFFS 101 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH---------NIGLQ 157 ++ + A++ G+ LL+ L+LS+ + ++ ++ Sbjct: 102 INALWKNKIAVLVGDYLLSKG------------------LLLSIENEDFDLLKIISVAVR 143 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M G++L I+ I ET + I + KT L+ C GA +A+ E E++ FG Sbjct: 144 EMSQGELLQIEKARNLDITETIYYEIIRQKTATLLASCCALGAQSVNATVEEVEKMHHFG 203 Query: 215 ENLGIIFQLADDLLD 229 E LG+ FQ+ DDL D Sbjct: 204 EVLGMAFQIKDDLFD 218 >gi|110597409|ref|ZP_01385696.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM 13031] gi|110340953|gb|EAT59424.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM 13031] Length = 324 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 33/206 (16%) Query: 44 RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 RY L GK+IR LV A L + ++ R +E +H +LIHDD+ +D +RR Sbjct: 37 RYVLKQQGKQIRPALVLLSAQLCGGVNESSYRAAIMVELLHSATLIHDDV--VDGAEMRR 94 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH---------N 153 G +++ + +++ G+ LL+ L+ SL H + Sbjct: 95 GLASINALWKNKISVLIGDYLLSRG------------------LLYSLEHKDYGFLHMVS 136 Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 ++ M G++L IQ I E + KT +L+ AC GA+ + ++ L Sbjct: 137 EAVRRMSEGEILQIQKTRSLDISEEDYLSVISDKTASLISSACAMGAMSSTTDESAIASL 196 Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236 + +GE LG+ FQ+ DDLLD D K Sbjct: 197 KSYGEYLGLAFQIRDDLLDYTGDSKK 222 >gi|260585122|ref|ZP_05852863.1| heptaprenyl diphosphate synthase component II [Granulicatella elegans ATCC 700633] gi|260157210|gb|EEW92285.1| heptaprenyl diphosphate synthase component II [Granulicatella elegans ATCC 700633] Length = 325 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 103/187 (55%), Gaps = 16/187 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK IR +T A+ N + +R V AA+E +H +L+HDD+ +D +RRG+ T+ Sbjct: 47 GGKMIRPAYLTLFANWSNNGNPQQVRAVAAALELLHVATLLHDDV--IDEADMRRGQETL 104 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + +Y AI AG+ +LT ++++S+ + L+ ++L N G+ ++ G++ + Sbjct: 105 NARYGNRVAIYAGDFVLTSCYQLLSTHLSDLEG-------ITLPTN-GMARVVEGELAQM 156 Query: 168 QDEFIDE--TQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ + + Q ++ + + KT L +C GA + ++ R + G+ +G+ FQ+ Sbjct: 157 RNRYRYDLGLQEYLKRIEGKTAQLFMVSCYMGAKLGQM--DDALRAKKIGQQIGMAFQIL 214 Query: 225 DDLLDCE 231 DD+LD + Sbjct: 215 DDILDYQ 221 >gi|315640540|ref|ZP_07895648.1| putative trans-hexaprenyltranstransferase [Enterococcus italicus DSM 15952] gi|315483744|gb|EFU74232.1| putative trans-hexaprenyltranstransferase [Enterococcus italicus DSM 15952] Length = 326 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 16/193 (8%) Query: 43 IRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + ++ GGK +R FL E N ++V ++IE +H +LIHDD+ +D+ Sbjct: 38 VEFSQAGGKYLRPAFFFLFAELGDPKKQNEEELIKVASSIELLHMATLIHDDI--IDDSP 95 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG TV Y + A+ G+ L T FE+ L D + ++ T+ ++G+ Sbjct: 96 LRRGTLTVQAHYGKDIAVYTGDLLFTLFFEV-------LIDVMNGSPFMA-TNAQAMKGL 147 Query: 160 LGGQMLDIQDEF-IDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 L G++ + + +++T + KT L AC GA S + G N Sbjct: 148 LLGELDQMNLRYNVNQTIDDYLLSVNGKTAELFWLACLEGAHFGKTSPQIEALAGEIGRN 207 Query: 217 LGIIFQLADDLLD 229 +GI FQ DD+LD Sbjct: 208 IGIAFQAYDDILD 220 >gi|227549792|ref|ZP_03979841.1| possible trans-hexaprenyltranstransferase [Corynebacterium lipophiloflavum DSM 44291] gi|227078047|gb|EEI16010.1| possible trans-hexaprenyltranstransferase [Corynebacterium lipophiloflavum DSM 44291] Length = 338 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 21/194 (10%) Query: 46 ALLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 AL GGK+ R + C+ + A++ E +H +L HDD+ MD +RRG Sbjct: 56 ALAGGKRFRPLVALLCSEFGPHPGSDNAVKGAVITELVHLATLYHDDV--MDEADMRRGV 113 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ----LKDNIRSQLMLSLTHNIGLQGML 160 + + +++ AI+AG+ L ++A ++S T+ D + + ++G +G Sbjct: 114 ESANARWNNTVAILAGDILFSHASLMMSEIDTETVRHFADTFGQLVTGQMRESVGARGG- 172 Query: 161 GGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 D Q ++ + + KT L+ A G++ A AS + R GE +G+ Sbjct: 173 ------------DPVQHYLTVIREKTAVLIASAAHLGSLHAGASADVVTRCETIGEAIGM 220 Query: 220 IFQLADDLLDCEED 233 IFQ+ DD++D D Sbjct: 221 IFQIVDDIIDIFSD 234 >gi|241668473|ref|ZP_04756051.1| polyprenyl synthetase family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877007|ref|ZP_05249717.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843028|gb|EET21442.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 325 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + N L A IE IH +L+HDD+ +D+ ++RRGK T + Sbjct: 44 GGKRLRPLLVMLFSRALNYTGNDHLACAAIIEFIHTATLLHDDV--VDDSHLRRGKETAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ DN++ Q++ T+ I +L Q+L+ Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVGL-----DNMKIMQILADATNKISEGEVL--QLLNA 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE---KERLRCFGENLGIIFQLA 224 ++ + E + KT L ACE +++ Q+ + ++ +G LG FQ+A Sbjct: 155 RNIELSEEDYTNVIYCKTAKLFEAACELAGVISLDKQSYSKLQNSIKNYGVYLGNAFQIA 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDVLDYVSD 223 >gi|332799448|ref|YP_004460947.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1] gi|332697183|gb|AEE91640.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1] Length = 326 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 8/188 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A + + ++E IH ++IHDD+ +D+ IRRG ++ Sbjct: 47 GGKRLRPAMLLAAARFGEYDFEIVRPLALSVELIHTATIIHDDI--VDDSPIRRGVLSIQ 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Q + A+ AG+ + FEI+++ NI Q+ +++ + + D Sbjct: 105 SQLGKDVAVYAGDYIFCKVFEILAASTYS---NILEQVSKAMSQICEGELKQREDLFDTD 161 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 F D ++ IQK KT L + + GA ++ A + L +G N+G+ FQ+ DDLL Sbjct: 162 LTFKD--YLYRIQK-KTAILFALSAQMGADVSKAPDKIIKALYSYGINIGMAFQIIDDLL 218 Query: 229 DCEEDLPK 236 D D K Sbjct: 219 DFTGDYKK 226 >gi|169629079|ref|YP_001702728.1| polyprenyl synthetase [Mycobacterium abscessus ATCC 19977] gi|169241046|emb|CAM62074.1| Probable polyprenyl synthetase [Mycobacterium abscessus] Length = 314 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 39/218 (17%) Query: 47 LLGGKKIRSFL-------VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 L GGK++R +T+ +N LRV AA+E +H +LIHDD+ +D+ Sbjct: 2 LRGGKRLRPAFAYWGWRAITDDPDPWNPE---VLRVCAALELLHTCALIHDDV--IDSSA 56 Query: 100 IRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 RRG+PT+H+++ + AI+ G+ LT+A +++ + + ++R Sbjct: 57 TRRGEPTIHVEFAALHRENGWSGSPEQFGISAAILLGDLALTWADDMVVGAQLSPEAHVR 116 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAI 198 ++ + S+ + +LGGQ LDI DE + ET + +I+ G + + G Sbjct: 117 ARGVWSILRS----EVLGGQYLDILSESSGDESV-ETALRVIRFKTAGYTVQRPLQLGVA 171 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +A + L G ++GI FQL DD+L D PK Sbjct: 172 IAGENAEISRLLGDVGLDIGIAFQLRDDVLGVFGD-PK 208 >gi|119509566|ref|ZP_01628713.1| Polyprenyl synthetase [Nodularia spumigena CCY9414] gi|119465755|gb|EAW46645.1| Polyprenyl synthetase [Nodularia spumigena CCY9414] Length = 323 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L++ L L R+ E IH SL+HDD+ +D +RRG P Sbjct: 44 GGKRIRPAIVLLISRATMLEEDITLRHRRLAEITEMIHTASLVHDDV--VDESQMRRGVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH + A++AG+ L + +++ + S++++ L QG + Sbjct: 102 TVHSLFGNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLATGEIQQG------I 155 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D I KT +L+ + ++ A+++ AS E L +G +LG+ FQ+ D Sbjct: 156 NCFDNGISIETYLKKSYYKTASLIANSSKAAALLSDASPETAENLYDYGRHLGLAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|260773626|ref|ZP_05882542.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio metschnikovii CIP 69.14] gi|260612765|gb|EEX37968.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio metschnikovii CIP 69.14] Length = 323 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSAKALGYQGEGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L +++ ++S + NI +G + Q+++ Sbjct: 101 ATFGNAASVLVGDFIYTRSFQMM----TEL-GSMKILKLMSHSVNIIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GA++ AS + ++ +G+ LG FQL DD++ Sbjct: 155 DPETTEESYMQVIYSKTARLFEAATQIGAMLCDASPEVERAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTAD 219 >gi|224536943|ref|ZP_03677482.1| hypothetical protein BACCELL_01819 [Bacteroides cellulosilyticus DSM 14838] gi|224521430|gb|EEF90535.1| hypothetical protein BACCELL_01819 [Bacteroides cellulosilyticus DSM 14838] Length = 324 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 16/184 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L+ A L+ +L ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPILLLLVAKLYGRICPESLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 Y+ A++ G+ LL A ++ KT + ++ + +G Q + G++L + + Sbjct: 103 IYNNKVAVLVGDYLLATA--LVQVGKTH------NYAIIDVVSRLG-QNLSEGELLQLSN 153 Query: 170 ----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +F +E +I+K KT L +SGA+ + + E R FGE +G+ FQ+ D Sbjct: 154 VSNLQFSEEIYFDVIRK-KTAVLFAACTKSGALSVGVTDEQAEFARQFGEYIGLCFQIKD 212 Query: 226 DLLD 229 D+ D Sbjct: 213 DIFD 216 >gi|213962477|ref|ZP_03390739.1| polyprenyl synthetase [Capnocytophaga sputigena Capno] gi|213954803|gb|EEB66123.1| polyprenyl synthetase [Capnocytophaga sputigena Capno] Length = 327 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 20/204 (9%) Query: 39 LLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLP 93 LL+ I Y ++ GK++R V A + + + + R + IE IH +L+HDD+ Sbjct: 32 LLNRITYYIVNRKGKQMRPMFVFLVAKMLSDDSKVSERTYRGASVIELIHTATLVHDDV- 90 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +D+ RRG +++ + A++ G+ LL+ ++S DN L+ ++ Sbjct: 91 -VDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLRIIS-- 140 Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KER 209 + ++ M G++L I+ I E + I + KT L+ C GA Q E E+ Sbjct: 141 VAVREMSEGELLQIEKARRLDIVEDVYYEIIRQKTATLIAACCAMGACSVQPEQPELIEK 200 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 +R FGE +G+ FQ+ DDL D ED Sbjct: 201 MRLFGEYIGMAFQIKDDLFDYTED 224 >gi|148242258|ref|YP_001227415.1| prenyl transferase [Synechococcus sp. RCC307] gi|147850568|emb|CAK28062.1| Prenyl transferase [Synechococcus sp. RCC307] Length = 323 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 23/190 (12%) Query: 49 GGKKIRSFLVT------ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R +V + A ++ H R+ E IH SL+HDD+ +D RR Sbjct: 44 GGKRLRPGIVLLLSRALDPAGELSLRHR---RLAQITEMIHTASLVHDDV--VDEANTRR 98 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML-- 160 G PTVH +++ A++AG+ L + +++ + S++++ L QG+ Sbjct: 99 GVPTVHSRFNSRVAVLAGDFLFAQSSWHLANLDDLEVVKLLSRVIMDLAEGEIRQGLFRY 158 Query: 161 -GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 GQ L+ +++++ KT +L+ + ++ +++ +++ +L FG LG+ Sbjct: 159 DTGQSLET---YLEKS------YWKTASLIANSAKAAGVLSELERDQLNQLHSFGRQLGL 209 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 210 AFQIVDDILD 219 >gi|257064654|ref|YP_003144326.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens DSM 20476] gi|256792307|gb|ACV22977.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens DSM 20476] Length = 364 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 13/196 (6%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y+ GGK+ R + + + AL AAIE H +LIHDD+ D +RRG+ Sbjct: 71 YSKNGGKRHRPLICLAACAAVGGDVRKALSSAAAIEHFHTAALIHDDIA--DEATLRRGE 128 Query: 105 PTVHIQYDEVTAIIAGN-GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 P +H+ Y AI G+ GL ++ P L D+ + +++ L + + GQ Sbjct: 129 PCLHLTYGMGLAINMGDLGLSLVNGTVMKDPA--LDDHTKVRVVTELIEMT--RRTIEGQ 184 Query: 164 MLDI---QDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 +DI +DE D E + M GAI+ A++ E LR +G + Sbjct: 185 AMDIGWARDERYDISPENYLIMATHKTAHYSGAVPLAIGAIVGGATEGAIEALRNYGLDT 244 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DDLL+ E D Sbjct: 245 GLAFQIQDDLLNIEGD 260 >gi|297170662|gb|ADI21686.1| geranylgeranyl pyrophosphate synthase [uncultured Verrucomicrobiales bacterium HF0130_14P10] Length = 344 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 13/211 (6%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 D LL A+H D + A+ GGK+IR LV C L+ + + Sbjct: 31 FDTYLLGRANHFDPAVRDLAVQALAS---GGKRIRPALVHACGIGNLAVSENLLKASSIV 87 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H +L+HDD+ +D+ IRR + TV+ AI+ G+ L +A E+ S + + Sbjct: 88 EFVHVATLVHDDV--LDDASIRRDRQTVYADRGATAAILLGDALFAHALEMAS----EFQ 141 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 N + + + T G + L D + ++ +I + KT L +C GA + Sbjct: 142 GNEVCRWVAAATRRT-CSGEIQQSFLR-GDFTLTSSRYKLIIEAKTAELFTVSCRLGAHV 199 Query: 200 AHASQNEKERLRC-FGENLGIIFQLADDLLD 229 A N L C FG LG+ +Q+ DDL+D Sbjct: 200 A-GLDNATSALACEFGRRLGLAYQIYDDLVD 229 >gi|291449099|ref|ZP_06588489.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] gi|291352046|gb|EFE78950.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] Length = 367 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 76 GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A++++ T +L + ++ GQ DI Sbjct: 134 KVHGPAQAILVGDALFALAYDLLLELGTVEAGRAARRL------TTATRKLIDGQAQDIS 187 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 188 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVD 247 Query: 226 DLL 228 DLL Sbjct: 248 DLL 250 >gi|237743842|ref|ZP_04574323.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 7_1] gi|229432873|gb|EEO43085.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 7_1] Length = 326 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 11/185 (5%) Query: 48 LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 L GK RS L+ CA L + N ++ A +E H SLIHDD+ +D+ RRGK Sbjct: 40 LSGKMFRSKLLLLCAFLGSNWKNNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 ++ +Y + A+ AG+ L+ F L + + +LS T G + + Sbjct: 98 VSIQGKYGKDAAVFAGDFLMARIF--YYGAVENLNEAVS---ILSKTVEYMCIGEIEQDL 152 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q++ I E + F + KT AL A GA + S+ ++L F +NLG++FQL Sbjct: 153 CRYQED-ISEKKYFKNIERKTAALFQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLK 211 Query: 225 DDLLD 229 DD+LD Sbjct: 212 DDILD 216 >gi|41409944|ref|NP_962780.1| IdsA [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398777|gb|AAS06396.1| IdsA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 394 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 24/202 (11%) Query: 45 YALLGGKKIRSFL-VTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 Y L GGK +R L + C L HL A L A +E H LIHDD+ D + RR Sbjct: 54 YPLRGGKALRPALSIATCLGLGG--HLEAILPTAATLELYHNAFLIHDDI--EDESWWRR 109 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGM-- 159 GKPT+HI Y A+ G+ +L+ + + L DN+ R L +L + M Sbjct: 110 GKPTLHIDYGVPVAVNVGDAMLSLSLQ-------PLLDNVERVGLGPALRILRAVATMTR 162 Query: 160 --LGGQMLDI-----QDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLR 211 + GQ L++ +D+ + ++KT ++G + A A+ + L Sbjct: 163 KTVDGQALELDWVHSNTWRLDDADYLEMVELKTSWYSFITPLQAGTVAAGATPDRMAPLE 222 Query: 212 CFGENLGIIFQLADDLLDCEED 233 G +LG FQ+ DDLL+ D Sbjct: 223 SLGRHLGAAFQITDDLLNLRAD 244 >gi|320157514|ref|YP_004189893.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio vulnificus MO6-24/O] gi|319932826|gb|ADV87690.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O] Length = 323 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L +++ ++S NI +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSDAVNIIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A + L+ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|289579302|ref|YP_003477929.1| trans-hexaprenyltranstransferase [Thermoanaerobacter italicus Ab9] gi|289529015|gb|ADD03367.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter italicus Ab9] Length = 322 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK +R V + L + AAIE +H +L+HDD+ +DN IRR KPT+ Sbjct: 44 SGKMLRPAFVILAGKFGEYDREKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQ 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL--QGMLGGQMLD 166 +Y + A+ G+ L + +F ++S DNI + ++ + +G + GQ Sbjct: 102 AEYGKDYAVFIGDFLFSESFLLLS-------DNITVSNLKKVSKVVSKICKGEI-GQFES 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + +I KT AL + GA + ++ + L G N+G+ FQ+ DD Sbjct: 154 RHNIYITINDYLRRIAAKTAALFALSFYVGAYESKCDESLAKALGSIGYNIGMAFQIIDD 213 Query: 227 LLD 229 +LD Sbjct: 214 ILD 216 >gi|308813211|ref|XP_003083912.1| putative polyprenyl diphosphate synthase (ISS) [Ostreococcus tauri] gi|116055794|emb|CAL57879.1| putative polyprenyl diphosphate synthase (ISS) [Ostreococcus tauri] Length = 374 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 21/199 (10%) Query: 49 GGKKIRS---FLVTECASL-FNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV ++ N++ +T R+ E IH SL+HDD+ +D+ RR Sbjct: 93 GGKRLRPVLVFLVARATAIKMNMSDITDRQRRLAEITEMIHTASLVHDDV--LDDCDTRR 150 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGLQGMLG 161 GK T+H Y AI+AG+ L + +++ + SQ++ I G L Sbjct: 151 GKETIHTLYGARVAILAGDFLFAQSSWFLANLDNLEVIKLISQVIADFADGEISQAGALF 210 Query: 162 GQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 DI DE+++++ KT +L+ +C+S ++ + ++ K + +G++LG+ Sbjct: 211 N--CDITLDEYMEKSH------NKTASLIAASCKSASVFSECEESVKIDMYEYGKHLGLA 262 Query: 221 FQLADDLLD---CEEDLPK 236 FQ+ DD+LD EE L K Sbjct: 263 FQVVDDILDFTQSEEQLGK 281 >gi|294784835|ref|ZP_06750123.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_27] gi|294486549|gb|EFG33911.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_27] Length = 326 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 11/185 (5%) Query: 48 LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 L GK +RS L+ CA L + + ++ A +E H SLIHDD+ +D+ RRGK Sbjct: 40 LSGKMLRSKLLLLCAFLGSNWKDHKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 ++ +Y + A+ AG+ L+ F L + + +LS T G + + Sbjct: 98 VSIQGKYGKDAAVFAGDFLIARIF--YYGAMENLNEAVS---ILSKTVEYMCIGEIEQDL 152 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q++ I E + F + KT AL A GA A S+ ++L+ F +NLG++FQL Sbjct: 153 CRYQED-ISEKKYFENIERKTAALFQAASYIGAKEAGCSEEIIQKLKLFVKNLGLMFQLK 211 Query: 225 DDLLD 229 DD+LD Sbjct: 212 DDILD 216 >gi|149927152|ref|ZP_01915409.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Limnobacter sp. MED105] gi|149824091|gb|EDM83312.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Limnobacter sp. MED105] Length = 330 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 11/184 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R LV A + + A +E IH +L+HDD+ +D +RRG+ Sbjct: 48 GGKRLRPALVILTARALGATQQQMQQTIELAAIVEFIHTATLLHDDV--VDESDMRRGRL 105 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T + +Y A++ G+ L + +F+++ K L D + ++ T+ I +L Q+L Sbjct: 106 TANAEYGNSAAVLVGDFLYSRSFQMMV--KIGLMDVM--DVLSEATNTIAEGEVL--QLL 159 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +D + E + + KT L +C I+ S+ L FG +G FQL D Sbjct: 160 NCKDPDVTEARYMQVIDFKTAKLFEASCRLAGIVTGQSKEAITNLGRFGAEVGSAFQLID 219 Query: 226 DLLD 229 D+LD Sbjct: 220 DVLD 223 >gi|326423749|ref|NP_759657.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] gi|319999111|gb|AAO09184.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] Length = 333 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 53 GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L +++ ++S NI +G + Q+++ Sbjct: 111 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSDAVNIIAEGEVL-QLMNCN 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A + L+ +G+ LG FQL DD++ Sbjct: 165 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 224 Query: 229 DCEED 233 D D Sbjct: 225 DYTSD 229 >gi|295135349|ref|YP_003586025.1| polyprenyl synthetase [Zunongwangia profunda SM-A87] gi|294983364|gb|ADF53829.1| polyprenyl synthetase [Zunongwangia profunda SM-A87] Length = 311 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 36/199 (18%) Query: 50 GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R FLV + S VN T R + IE IH +L+HDD+ +D+ RRG + Sbjct: 31 GKQMRPMFVFLVAKMVSDGKVNERT-YRGASVIELIHTATLVHDDV--VDDSNRRRGFFS 87 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQ 157 ++ + A++ G+ LL+ L+LS+ +N + ++ Sbjct: 88 INALWKNKIAVLVGDYLLSKG------------------LLLSIDNNDFDLLKIISVAVR 129 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M G++L I+ I E + I + KT L+ C GA + E +R FG Sbjct: 130 EMSEGELLQIEKARRLDITEEVYYDIIRQKTATLIAACCSLGAASVKPDSGDVENMRRFG 189 Query: 215 ENLGIIFQLADDLLDCEED 233 E +G+ FQ+ DDL D E+ Sbjct: 190 ELIGMAFQIKDDLFDYGEE 208 >gi|282901404|ref|ZP_06309329.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505] gi|281193683|gb|EFA68655.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505] Length = 323 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L++ +L L R+ E IH SL+HDD+ +D IRRG P Sbjct: 44 GGKRIRPAIVLLISRATTLEEDISLGHRRLAEITEMIHTASLVHDDV--VDESDIRRGVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH + A++AG+ L + +++ + S++++ L QG L Sbjct: 102 TVHSLFGNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLAAGEIQQG------L 155 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D + KT +L+ + ++ I+++ S L +G++LG+ FQ+ D Sbjct: 156 NRFDTNLSIETYLKKSYYKTASLIANSAKAAGILSNVSSESANNLYNYGKDLGLAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|90200410|gb|ABD92707.1| solanesyl diphosphate synthase [Hevea brasiliensis] Length = 418 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A + + LT R+ IE IH SLIHDD+ +D +RR Sbjct: 136 GGKRMRPALVFLVSRATAEIVGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESNMRR 193 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TVH Y A++AG+ + + ++ N+ + ++ L + ++ G Sbjct: 194 GKQTVHQLYGTRVAVLAGDFMFAQSSWYLA--------NLENIEVIKLISQV-IKDFASG 244 Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F ++ + + KT +L+ + + AI + + E++ +G+NLG+ Sbjct: 245 EIKQASSLFDCDVELEEYLIKSYYKTASLIAASTKGAAIFSGVDSSVAEQMYEYGKNLGL 304 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 305 SFQVVDDVLD 314 >gi|73542643|ref|YP_297163.1| trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134] gi|72120056|gb|AAZ62319.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134] Length = 325 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A F + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 46 GGKRLRPVILLMSARAFGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRETAN 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ + +R +LS N+ +G + Q+L++ Sbjct: 104 AVFGNAASVLVGDFLYSRAFQMMVDAGS-----MRIMEILSNATNVIAEGEVL-QLLNMH 157 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + KT L + + GA++A A +E +G +G FQL DD+L Sbjct: 158 DPDVTIERYLQVIRYKTAKLFEASAQLGAVLAGADAAMEEAAAEYGRRIGTAFQLIDDML 217 Query: 229 D 229 D Sbjct: 218 D 218 >gi|282866077|ref|ZP_06275125.1| Polyprenyl synthetase [Streptomyces sp. ACTE] gi|282559116|gb|EFB64670.1| Polyprenyl synthetase [Streptomyces sp. ACTE] Length = 367 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 76 GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T ++ ++ + S T ++ GQ DI Sbjct: 134 KVHGPAQAILVGDALFALANEVLLELGT-VEAGRAARRLTSATRK-----LIDGQAQDIS 187 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 188 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADVLEAYGYHLGLAFQAVD 247 Query: 226 DLL 228 DLL Sbjct: 248 DLL 250 >gi|196228124|ref|ZP_03126991.1| protein of unknown function DUF116 [Chthoniobacter flavus Ellin428] gi|196227527|gb|EDY22030.1| protein of unknown function DUF116 [Chthoniobacter flavus Ellin428] Length = 590 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 15/190 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GK+ R FL + +V A+EC H SLIHDD+ DN R G Sbjct: 271 AGKRWRPFLTVAAYQALRTTPGAPIPDDLRKVAVAVECFHKASLIHDDI--EDNDAQRYG 328 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 +PT+H ++ A+ G+ L+ + ++++ + + ML + G + + GQ Sbjct: 329 EPTLHEEHGIAVALNVGDLLIGEGYRLLAACNASPEQKV---AMLRIAAE-GQRELCRGQ 384 Query: 164 MLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ Q + + T+V I + KT A + G + A + +E L+ + E LGI Sbjct: 385 GAELVWARQPQPLTSTEVLDIFRKKTAPAFGVALQLGTVYAGQLEEHEEVLQAYSEALGI 444 Query: 220 IFQLADDLLD 229 +Q+ DDL D Sbjct: 445 AYQIRDDLSD 454 >gi|182434756|ref|YP_001822475.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775273|ref|ZP_08234538.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1] gi|178463272|dbj|BAG17792.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655606|gb|EGE40452.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1] Length = 367 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 76 GGKAVRPALALLSAEAAGAPAEAGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A++++ T +L + + ++ GQ DI Sbjct: 134 KVHGPAQAILVGDALFALAYDLLLELGTVEAGRAARRLTTAT------RKLIDGQAQDIS 187 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 188 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVD 247 Query: 226 DLL 228 DLL Sbjct: 248 DLL 250 >gi|302807465|ref|XP_002985427.1| hypothetical protein SELMODRAFT_446259 [Selaginella moellendorffii] gi|300146890|gb|EFJ13557.1| hypothetical protein SELMODRAFT_446259 [Selaginella moellendorffii] Length = 415 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 35/248 (14%) Query: 4 GLPSKLQENSKR--------IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKK 52 G+ S +Q +R I+ + DL L Q + N L+SA GGK+ Sbjct: 77 GVASYVQRRERREKLSLNEIIEPVSSDLDALNQNLQSIVGVQNPLLMSAAEQIFGAGGKR 136 Query: 53 IRS---FLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 +R FLV+ + N HL R+ E IH SLIHDD+ +D +RRGK T Sbjct: 137 MRPAIVFLVSRATMQLARLNTIHLQHRRLAEITEMIHTASLIHDDV--LDESDVRRGKET 194 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQM 164 VH Y A++AG+ + + +++ DN+ ++S G + + Sbjct: 195 VHQLYGTRIAVLAGDFMFAQSSWYLAN-----LDNLEVIKLISQVIKDFASGEIQQASSL 249 Query: 165 LDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D + D ++D++ KT +L+ + S AI + A + +++ +G+ LG+ F Sbjct: 250 FDSEITLDNYLDKSY------YKTASLIAASTRSAAIFSGADPSVCDKMFDYGKYLGLAF 303 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 304 QIVDDILD 311 >gi|17505681|ref|NP_491588.1| COenzyme Q (ubiquinone) biosynthesis family member (coq-1) [Caenorhabditis elegans] gi|15617696|gb|AAB37678.2| Coenzyme q (ubiquinone) biosynthesis protein 1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 393 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 18/163 (11%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++G E IH SL+HDD+ +D RRG +V+ + +++ G+ +L A +I+ S Sbjct: 137 KIGMIAEMIHTASLVHDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCS 194 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV----FMIQKM--KTGA 187 K NI S +M S+ ++ L G+ + + D T V I+K KT + Sbjct: 195 IG---KPNIIS-VMASIIEDLVL-----GEFMQMSTTPTDATPVDRMKAYIEKTHRKTAS 245 Query: 188 LMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLD 229 L +C S AI+A S + + +G NLGI FQLADDLLD Sbjct: 246 LFASSCRSAAILADGSDLKLHEIAFEYGRNLGIAFQLADDLLD 288 >gi|255078126|ref|XP_002502643.1| predicted protein [Micromonas sp. RCC299] gi|226517908|gb|ACO63901.1| predicted protein [Micromonas sp. RCC299] Length = 452 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 49/240 (20%) Query: 19 ILDDLLLQTASHMQT----------QHNDRLLSAIRYAL-LGGKKIRSFLV----TECAS 63 ++DD++ S M+ + N LL+A GGK++R LV A Sbjct: 130 VIDDIIAPVKSDMEQMRSNILDIVGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAQ 189 Query: 64 LFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L +++ +T R+ E IH SL+HDD+ +D+ RRG T+H Y AI+AG+ Sbjct: 190 LMSMDDITERQRRLAEITEMIHTASLVHDDV--LDDCDTRRGAETIHTLYGTRVAILAGD 247 Query: 122 GLLTYA------------FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 L + ++IS D SQ ++ L+G Sbjct: 248 FLFAQSSWYLANLDNLEVIKLISQVIADFADGEISQAGALFNCDVTLEG----------- 296 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +++++ KT +L+ +C+S A+ + S++ K + +G++LG+ FQ+ DD+LD Sbjct: 297 -YLEKSH------NKTASLIAASCKSAAVFSEVSEDVKMDMYEYGKHLGLAFQIVDDILD 349 >gi|284166593|ref|YP_003404872.1| polyprenyl synthetase [Haloterrigena turkmenica DSM 5511] gi|284016248|gb|ADB62199.1| Polyprenyl synthetase [Haloterrigena turkmenica DSM 5511] Length = 280 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 23/217 (10%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 +R+ ++DDL A + +H AL GGK++R + A+ Sbjct: 13 ERLVEVVDDLE-PDALRAEVEHT---------ALAGGKRVRPMVTVLACETVGGTAEDAV 62 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 G IE +H SL+ DD+ +D +RRG + ++ AI++ +GLL AF + SS Sbjct: 63 DFGVGIELVHAASLVVDDI--IDRSELRRGTTSAWAEFGYGPAIVSSDGLLGEAFALFSS 120 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 D ++++ +G+ G+ ++ E E + + + KTGAL A Sbjct: 121 ------DPDATRVVAEAMVELGI-----GEATELSAEPETEAEYMTLARRKTGALFRAAA 169 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 E GAI A + E L + E +G+ FQ+ DD+LD Sbjct: 170 ELGAIAAGSDAVTVEALGEYAERVGVAFQIRDDVLDA 206 >gi|260495254|ref|ZP_05815382.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_33] gi|260197311|gb|EEW94830.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. 3_1_33] Length = 326 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 11/185 (5%) Query: 48 LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 L GK RS L+ CA L + N ++ A +E H SLIHDD+ +D+ RRGK Sbjct: 40 LSGKMFRSKLLLLCAFLGSNWKNNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 ++ +Y + A+ AG+ L+ F L + + +LS T G + + Sbjct: 98 VSIQGKYGKDAAVFAGDFLMARIF--YYGAVENLNEAVS---ILSKTVEYMCIGEIEQDL 152 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q++ I E + F + KT AL A GA + S+ ++L F +NLG++FQL Sbjct: 153 CRYQED-ISENKYFENIERKTAALFQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLK 211 Query: 225 DDLLD 229 DD+LD Sbjct: 212 DDILD 216 >gi|56459585|ref|YP_154866.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] gi|56178595|gb|AAV81317.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] Length = 324 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L ++ IE IH +L+HDD+ +D +RRG+ T + Sbjct: 44 GGKRLRPLLAILACRALGYEGNDHRKLATIIEFIHTATLLHDDV--VDESELRRGRKTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AF+++ D++R +L+ NI +G + Q+++ Sbjct: 102 AVFGNEASVLVGDFLYTRAFQLMVDL-----DSLRILRILADATNIISEGEVL-QLMNCN 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E F + KT L A E ++ + ++L +G LG FQL DDL+ Sbjct: 156 DPDTSEASYFNVIYGKTAKLFEAATELAGVLTAQDEKVTQQLADYGRYLGTAFQLVDDLM 215 Query: 229 DCEED 233 D D Sbjct: 216 DYTAD 220 >gi|328958756|ref|YP_004376142.1| heptaprenyl diphosphate synthase component II [Carnobacterium sp. 17-4] gi|328675080|gb|AEB31126.1| heptaprenyl diphosphate synthase component II [Carnobacterium sp. 17-4] Length = 326 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 22/189 (11%) Query: 49 GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK +R + L + + N A AAIE +H +LIHDD+ +D+ RRG+ Sbjct: 46 GGKLVRPAYTLLFSTFGEDQDPNRARAF--AAAIEVLHMATLIHDDV--IDDSPKRRGQQ 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ +Y + A+ AG+ L T +F++I+ +K Q+ ++ G++ +L G++ Sbjct: 102 TIQSKYGKDIAVYAGDYLFTVSFKLITDYSNSMK-----QMQINTK---GMEKILMGEID 153 Query: 166 DIQDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCF--GENLGII 220 + + + + ++ Q KT L +C SGA+ + Q E+ C+ G ++G+ Sbjct: 154 QMHLRYNQKITIRNYLTQISGKTAQLFALSCYSGAL--ESGQTERFARNCYYIGSHIGMA 211 Query: 221 FQLADDLLD 229 FQ+ DD+LD Sbjct: 212 FQIKDDILD 220 >gi|229496293|ref|ZP_04390013.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406] gi|229316871|gb|EEN82784.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406] Length = 325 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 17/189 (8%) Query: 50 GKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GK IR L+ SL N T + +E +H SLIHDD+ +D +RRGKPT+ Sbjct: 45 GKHIRPILMGLLVSLQGKEPNQRT-ISCAVLLEMLHMASLIHDDV--IDQAPLRRGKPTL 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + Y +A++ G+ +L+ AF + I ++ N+G + + G++L I Sbjct: 102 NAFYGNHSAVLVGDYILSIAFLRAA--------EIGGSSLIRTVANLG-KHLSEGELLQI 152 Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q + IDE F I + KT L G A E ++ G++LGI FQL Sbjct: 153 QVATERIIDEKNYFSIIEKKTATLFEACAALGMYSIDAKPEELLKMTQLGKHLGIAFQLR 212 Query: 225 DDLLDCEED 233 DD+ D ++ Sbjct: 213 DDIFDYTKE 221 >gi|85712490|ref|ZP_01043538.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] gi|85693624|gb|EAQ31574.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] Length = 323 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L L + IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLAVLSCRALGYEGRAHLSLATIIEFIHTATLLHDDV--VDESELRRGRKTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AF+++ QL D++ +L+ N+ +G + Q+++ Sbjct: 101 AVFGNEASVLVGDFLYTRAFQMM----VQL-DSMTILSILADATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + F + KT L A + ++ E+L +G LG FQL DDL+ Sbjct: 155 DPDTTEARYFDVIYGKTAKLFEAATQLAGVLTEQDSTVTEQLADYGRYLGTAFQLVDDLM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|303289847|ref|XP_003064211.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454527|gb|EEH51833.1| predicted protein [Micromonas pusilla CCMP1545] Length = 324 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 41/209 (19%) Query: 49 GGKKIRSFLV----TECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R LV A L ++ +T R+ E IH SL+HDD+ +D+ RR Sbjct: 43 GGKRLRPVLVFLVARSTAQLMDMPEITDRQRRLAEITEMIHTASLVHDDV--LDDCDTRR 100 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYA------------FEIISSPKTQLKDNIRSQLMLSL 150 G T+H Y AI+AG+ L + ++IS D SQ Sbjct: 101 GAQTIHTLYGTRVAILAGDFLFAQSSWYLANLDNLEVIKLISQVIADFADGEISQAGALF 160 Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 ++ L+G L KT +L+ +C+S A+ + S++ K + Sbjct: 161 NCDVTLEGYLEKS------------------HNKTASLIAASCKSAAVFSEVSEDIKVDM 202 Query: 211 RCFGENLGIIFQLADDLLD---CEEDLPK 236 +G++LG+ FQ+ DD+LD EE L K Sbjct: 203 YEYGKHLGLAFQVVDDILDFTQTEEQLGK 231 >gi|218197333|gb|EEC79760.1| hypothetical protein OsI_21146 [Oryza sativa Indica Group] Length = 581 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 22/216 (10%) Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNVNHLTA--LRVG 76 LL+ +++ T+ N L+SA GGK++R FLV+ A L + LT R+ Sbjct: 274 LLRALTYIHTE-NPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELAGLLELTTEHQRLA 332 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE IH SLIHDD+ +D+ +RRGK T+H Y A++AG+ + + ++ Sbjct: 333 EIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLA---- 386 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFAC 193 N+ + ++ L + ++ G++ F + + KT +L+ + Sbjct: 387 ----NLENIEVIKLISQV-IKDFASGEIKQASTLFDCDVTLDDYLLKSYYKTASLLASST 441 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 S AI + S E++ +G NLG+ FQ+ DD+LD Sbjct: 442 RSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILD 477 >gi|91785273|ref|YP_560479.1| octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400] gi|91689227|gb|ABE32427.1| Octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400] Length = 330 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPALLLLVAGALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +R +LS NI +G + Q+L++ Sbjct: 109 ALFGNAASVLVGDFLYSRSFQMMVGVG-----KMRVMEILSEATNIISEGEVL-QLLNMH 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A + GA++A + + FG +G FQ+ DD L Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGSDAKTEAAAAEFGRRIGTAFQIMDDWL 222 Query: 229 D 229 D Sbjct: 223 D 223 >gi|296160521|ref|ZP_06843337.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1] gi|295889270|gb|EFG69072.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1] Length = 330 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 8/155 (5%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F+++ Sbjct: 77 LAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGV 134 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 +R +LS NI +G + Q+L++ D +DE + + + KT L A + Sbjct: 135 G-----KMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIRYKTAKLFEAAAQ 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA++A + + FG +G FQ+ DD LD Sbjct: 189 LGAVLAGSDAKTEAAAAEFGRRIGTAFQIMDDWLD 223 >gi|256027542|ref|ZP_05441376.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. D11] gi|289765501|ref|ZP_06524879.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. D11] gi|289717056|gb|EFD81068.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp. D11] Length = 326 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 11/185 (5%) Query: 48 LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 L GK RS L+ CA L + N ++ A +E H SLIHDD+ +D+ RRGK Sbjct: 40 LSGKMFRSKLLLLCAFLGSNWKNNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 ++ +Y + A+ AG+ L+ F L + + +LS T G + + Sbjct: 98 VSIQGKYGKDAAVFAGDFLMARIF--YYGAVENLNEAVS---ILSKTVEYMCIGEIEQDL 152 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q++ I E + F + KT AL A GA + S+ ++L F +NLG++FQL Sbjct: 153 CRYQED-ISEKKYFENIERKTAALFQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLK 211 Query: 225 DDLLD 229 DD+LD Sbjct: 212 DDILD 216 >gi|187925422|ref|YP_001897064.1| polyprenyl synthetase [Burkholderia phytofirmans PsJN] gi|187716616|gb|ACD17840.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN] Length = 330 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 8/155 (5%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F+++ Sbjct: 77 LAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGV 134 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 +R +LS NI +G + Q+L++ D +DE + + + KT L A + Sbjct: 135 G-----KMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIRYKTAKLFEAAAQ 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA++A + + FG +G FQ+ DD LD Sbjct: 189 LGAVLAGSDAKTEAAAAEFGRRIGTAFQIMDDWLD 223 >gi|167627921|ref|YP_001678421.1| polyprenyl synthetase family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597922|gb|ABZ87920.1| polyprenyl synthetase family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 325 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 13/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + N L A IE IH +L+HDD+ +D+ ++RRGK T + Sbjct: 44 GGKRLRPLLVMLFSRALNYTGNDHLACAAIIEFIHTATLLHDDV--VDDSHLRRGKETAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + AF+++ DN++ Q++ T+ I +L Q+L+ Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVGL-----DNMQIMQILADATNKISEGEVL--QLLNA 154 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE---KERLRCFGENLGIIFQLA 224 ++ + E + KT L ACE +++ Q+ + ++ +G LG FQ+A Sbjct: 155 RNIELSEEDYTNVIYCKTAKLFEAACELAGVISLDKQSYSKLQNSIKNYGVYLGNAFQIA 214 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 215 DDVLDYVSD 223 >gi|83945354|ref|ZP_00957702.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii HTCC2633] gi|83851188|gb|EAP89045.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii HTCC2633] Length = 351 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 14/205 (6%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 + +A+ Q D L++A GGK+IR + A + + + AA+E IH Sbjct: 52 MASATRSIPQTADYLVAA------GGKRIRPLITVTAARMLGYEGDGHVSLAAAVEYIHS 105 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRGK + + +++ G+ L +F ++ + + + Sbjct: 106 ATLLHDDV--VDESELRRGKAPANTVWGNAHSVLVGDFLFARSFMMMVDAGS-----MDA 158 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 +LS ++ +G + Q+ +++ I + I KT AL A + I+ + + Sbjct: 159 LHVLSRAASVIAEGEVR-QLAAVRNIDISRDEYMSIIDAKTAALFSAAAQVAPILYGSDK 217 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 ++ L +G LG+ FQL DD LD Sbjct: 218 AIEDGLETYGRELGLAFQLVDDALD 242 >gi|167564177|ref|ZP_02357093.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis EO147] gi|167571298|ref|ZP_02364172.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis C6786] Length = 330 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A N + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPALLLLVAGALGENTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 109 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DET+ + + KT L + GA++A A + +G +G FQ+ DD L Sbjct: 163 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 222 Query: 229 D 229 D Sbjct: 223 D 223 >gi|320008620|gb|ADW03470.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331] Length = 349 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 17/204 (8%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 H Q D +A R GK IR LV A + A+R A+E H ++L+H Sbjct: 48 HFGWQDADGTPAAGR----AGKAIRPALVLAAARAVGGDPDAAMRAAVAVELAHNFTLLH 103 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RR +PT + A+I G+ + + A +++ + +L Sbjct: 104 DDV--IDEDTTRRHRPTAWAVFGVPDAVITGDAMFSLALRLLTDDPHPASPHAAGRLSTC 161 Query: 150 LTHNIGLQGMLGGQMLD--IQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQ 204 + + GQ D ++D D+ + + KTGAL+ AC GA+ A + Sbjct: 162 VIE------LCAGQQADCGLEDRGPDDVTLDECLAMAMAKTGALLGCACALGALYGGADE 215 Query: 205 NEKERLRCFGENLGIIFQLADDLL 228 + FG G+ FQL DDL+ Sbjct: 216 RAVRAMDGFGREAGLAFQLIDDLI 239 >gi|119472626|ref|ZP_01614617.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7] gi|119444830|gb|EAW26131.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7] Length = 323 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + +E IH +L+HDD+ +D +RRG PT + Sbjct: 43 GGKRVRPMLAILAAKALGYTGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ +++ G+ + T +F++ + K Q+ Q++ T+ I +L Q+++ Sbjct: 101 AEFGNAASVLVGDFIYTRSFQLMVGLGKMQIM-----QILADATNIIAEGEVL--QLMNC 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E + KT L A AI+ + + L +G +LG FQL DD+ Sbjct: 154 NDPDTTEASYMQVIYSKTAKLFEAATGLAAIITNNDEATLNALNLYGMHLGTAFQLVDDV 213 Query: 228 LDCEED 233 LD D Sbjct: 214 LDYNAD 219 >gi|307262498|ref|ZP_07544143.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306867875|gb|EFM99706.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 331 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A+ + A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESNMRRGRATAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++ ++S N +G + Q++++ Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTDV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+A ++ + L+ +G LG FQL DD+L Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|297545452|ref|YP_003677754.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843227|gb|ADH61743.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 322 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK +R V + L + AAIE +H +L+HDD+ +DN IRR KPT+ Sbjct: 44 SGKMLRPAFVILAGKFGEYDREKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQ 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL--QGMLGGQMLD 166 +Y + A+ G+ L + +F ++S DNI + ++ + +G +G Q Sbjct: 102 AKYGKDYAVFIGDFLFSESFLLLS-------DNITVSNLKKVSKVVSKICKGEIG-QFES 153 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + +I KT AL + GA + ++ + L G N+G+ FQ+ DD Sbjct: 154 RHNIYITINDYLRRIAAKTAALFALSFYVGAYESKCDESLAKALGSIGYNIGMAFQIIDD 213 Query: 227 LLD 229 +LD Sbjct: 214 ILD 216 >gi|153007031|ref|YP_001381356.1| polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5] gi|152030604|gb|ABS28372.1| Polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5] Length = 349 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 14/202 (6%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 ++L +A R+ + GGK+IR + + A+ + E H +L+HDD+ Sbjct: 54 EEKLRAAARHLVSAGGKRIRPMVTLLSCGACGGDMRAAVPYAVSAELTHSATLLHDDV-- 111 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +D+G +RRG+P + + ++++G+ LLT A EI+S+ + RS + L Sbjct: 112 IDDGPLRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSA------EPARSAALPPLLAT- 164 Query: 155 GLQGMLGGQML--DIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 ++ ++ G++L ++ F E + KT +L +A +GA A E L Sbjct: 165 -MRRLVEGEVLQLSLRSSFSATEKDYLDVVIGKTASLFGWAAAAGAWAAGQVGRIPEALV 223 Query: 212 CFGENLGIIFQLADDLLDCEED 233 FGE +GI FQL DD LD D Sbjct: 224 QFGEGIGIAFQLVDDALDYAAD 245 >gi|91200422|emb|CAJ73469.1| similar to octaprenyl diphosphate synthase [Candidatus Kuenenia stuttgartiensis] Length = 323 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 107/220 (48%), Gaps = 20/220 (9%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFNVNHLTA 72 I+ ++D++ + +Q Q+N + + GK++R + L +C S H+ Sbjct: 10 IEPLMDEVEARFYKELQPQNNSLADLVVHISKYKGKRLRPALTLLSGKCISDTAPQHID- 68 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + +E +H +L+HDD+ +D +RR +++ ++ +I+ G+ L + F I+S Sbjct: 69 --LAVVVEMVHTATLVHDDI--IDEAAMRRHVESMNSKWGREISILFGDYLFSRGFTILS 124 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALM 189 + +Q+ + L+LS T N M G+++ ++ + + E I + KT +L Sbjct: 125 ALDSQI-----ATLLLSQTVNT----MCEGELIQLKRRYDVGLSEEDYIDIIEKKTASLC 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +C GA A A+ E + +G +G FQ+ DD LD Sbjct: 176 ATSCRLGATFAGANHKLSEMMSNYGLKIGTAFQIIDDCLD 215 >gi|297625742|ref|YP_003687505.1| Heptaprenyl diphosphate synthase component II [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921507|emb|CBL56061.1| Heptaprenyl diphosphate synthase component II [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 356 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 87/186 (46%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R LV + L N A +E H SL HDD+ MD+ +RRG P+ Sbjct: 78 GGKRFRPMLVAVTSQLGPQPNDAAAQIAAVVVELTHVASLYHDDV--MDDAALRRGVPSA 135 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + Y TAI+ G+ L A ++ T D +R Q + T + G + +M Sbjct: 136 NAAYGNSTAIMVGDWLFARASNQVA---TLGNDFVRMQ---ADTFAELVTGQI-DEMRGP 188 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 Q + KTGAL+ + GA+ + AS+ + L FG +G++FQLADDL Sbjct: 189 QPGHDAMLHYLNVVAGKTGALIRTSAVFGAMTSGASREVLDALAQFGMQIGVVFQLADDL 248 Query: 228 LDCEED 233 +D D Sbjct: 249 MDIMSD 254 >gi|328886497|emb|CCA59736.1| Octaprenyl-diphosphate synthase ; Dimethylallyltransferase ; Geranyltranstransferase (farnesyldiphosphate synthase) ; Geranylgeranyl pyrophosphate synthetase [Streptomyces venezuelae ATCC 10712] Length = 352 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 11/182 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A V + A+E +H +SL+HDDL MD RR + TV Sbjct: 62 GKAVRPALALLSAEAAGVAPEVGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVWK 119 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + AI+ G+ L A EI+ T +L + + ++ GQ DI Sbjct: 120 VHGPAQAILVGDALFALANEILLELGTVEAGRATRRLTTAS------RKLIDGQAQDISY 173 Query: 170 EFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E + V ++ KTGAL+ A GA++ A ++L +G +LG+ FQ DD Sbjct: 174 EHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVDD 233 Query: 227 LL 228 LL Sbjct: 234 LL 235 >gi|226307057|ref|YP_002767017.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis PR4] gi|226186174|dbj|BAH34278.1| probable geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis PR4] Length = 379 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 37/212 (17%) Query: 45 YALLGGKKIR-SFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + L GGK++R SF T + +R AA+E + +L+HDD+ +D Sbjct: 64 FVLRGGKRVRPSFAWTGWLGAGGDPNGSDAEAVIRACAALELVQACALVHDDI--IDAST 121 Query: 100 IRRGKPTVHIQYD----------------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 RRG PTVH++++ E AI+ G+ L +A ++I R Sbjct: 122 TRRGFPTVHVEFEDQHRGEEWSGDSAHFGEAVAILLGDLALAWADDMIRESGISPDAAAR 181 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DET--QVFMIQKMKTGALMCFACES----G 196 + S +LGGQ LDI +E DET + + KT A + E G Sbjct: 182 VSPVWSAMRTE----VLGGQFLDISNEARGDETVEAAMRVNRYKTAA---YTIERPLHLG 234 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A + A + R FG ++GI FQL DDLL Sbjct: 235 AALFGADAELIDAYRTFGTDIGIAFQLRDDLL 266 >gi|13383239|dbj|BAB39470.1| putative GGPP synthase 3 [Lactuca indica var. laciniata] Length = 127 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 7/129 (5%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGKPT H Y E A++AG+ LL +AF+ I+S + L +IG Sbjct: 1 NDDFRRGKPTNHKVYGEDVAVLAGDSLLAFAFQHIASATVGASPERVLAAVGELAKSIGT 60 Query: 157 QGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 +G++ GQ++DI +D +D+ + I KT AL+ A GAI+ S + E+LR Sbjct: 61 EGLVAGQVVDIASTGAKDVGLDQLEFIHIH--KTAALLEAAVVLGAILGGGSDTQVEKLR 118 Query: 212 CFGENLGII 220 F +G++ Sbjct: 119 KFARCIGLL 127 >gi|320100357|ref|YP_004175949.1| polyprenyl synthetase [Desulfurococcus mucosus DSM 2162] gi|319752709|gb|ADV64467.1| Polyprenyl synthetase [Desulfurococcus mucosus DSM 2162] Length = 367 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 40/214 (18%) Query: 45 YALLGGKKIRSFLV------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 Y L GGK++R+FL E S + + +T+L G IE + Y L+HDD+ MD Sbjct: 50 YTLRGGKRLRAFLTLVGYWSKEWGS-GDPSLITSLMTG--IELLQSYLLVHDDV--MDRD 104 Query: 99 YIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 IRRG PTVH Y + AI G+ L A E +S + + + Sbjct: 105 EIRRGGPTVHSWFRDKCIREFKTGDCTHYGDSQAITVGDFLEATAVEYVS--RAGINGEV 162 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMKTGALMC-FACESG 196 S+L+ T+ GL+ + GQ LD+ + + E V ++ ++KT + G Sbjct: 163 LSKLL--GTYAAGLRKVAYGQYLDVLFSYRSLHEVSERDVLLVHRLKTASYTIELPLHMG 220 Query: 197 AIMAHASQNEK--ERLRCFGENLGIIFQLADDLL 228 AI A NE+ L + GI FQL DD++ Sbjct: 221 AI-ASGKYNERLLGELSSYAIPAGIAFQLRDDII 253 >gi|222147711|ref|YP_002548668.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4] gi|221734699|gb|ACM35662.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4] Length = 338 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A++F +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMLTLASAAMFGYEGEGHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + ++ S + LQ + M + Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVEVGSLEALDVLSTAASVIAEGEVLQLSVAKNMETTE 174 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D++ + + KT AL A E G I+A + + L+ +G NLG+ FQL DD L Sbjct: 175 DDYQ------AVIRAKTAALFAAAAEVGPIVAGTDKAARNALKSYGMNLGLAFQLVDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|322369459|ref|ZP_08044024.1| Dimethylallyltranstransferase [Haladaptatus paucihalophilus DX253] gi|320551191|gb|EFW92840.1| Dimethylallyltranstransferase [Haladaptatus paucihalophilus DX253] Length = 351 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 28/214 (13%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLV-------------TECASLFNVNHLTALRVGAA---I 79 +RL A RY L GGK++R ++ +E F T L V AA I Sbjct: 38 ERLYEASRYLLDAGGKRLRPTVLLLVADALADVEPMSEAYRKFPALDGTELDVMAAAVSI 97 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E I ++LIH MD+ +RRG P+VH YD TAI+AG+ L + AFEI+ Sbjct: 98 EVIQSFTLIH--DDIMDDDDLRRGVPSVHRAYDTETAILAGDTLYSKAFEIMLETDATPD 155 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACES 195 + + +L+ T + GQ LD+ + + + + + MI+ KT L A + Sbjct: 156 RCVTALDVLASTCT----RICEGQALDVAFEERPDVLPDEYLEMIEN-KTAVLYGAAAKV 210 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ A + E L +G ++G FQ+ DD+LD Sbjct: 211 PAVLLGADEETTEALYRYGIDVGRAFQIQDDVLD 244 >gi|312141024|ref|YP_004008360.1| polyprenyl synthetase [Rhodococcus equi 103S] gi|325675339|ref|ZP_08155023.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707] gi|311890363|emb|CBH49681.1| polyprenyl synthetase [Rhodococcus equi 103S] gi|325553310|gb|EGD22988.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707] Length = 342 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 16/194 (8%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGY 99 +A+ A GGK+ R A L A+ A + E +H +L HDD+ MD Sbjct: 54 AALHLAKAGGKRFRPLFTVLTAQLGPEGSDPAVVTAATVVELVHLATLYHDDV--MDEAA 111 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG P+ + ++ AI+AG+ L +A ++S T + +R +++ T + Sbjct: 112 MRRGAPSANARWGNSIAILAGDYLFAHASRLVS---TLGPEAVR---IIAET----FAEL 161 Query: 160 LGGQMLDI--QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 + GQM + E D + ++ + KTG+L+ + G + A ++ RL G+ Sbjct: 162 VTGQMRETIGAREKQDPVEHYLKVVWEKTGSLIAASGRFGGTFSGADADQIARLERLGDA 221 Query: 217 LGIIFQLADDLLDC 230 +G FQ+ADD++D Sbjct: 222 VGTAFQIADDIIDI 235 >gi|294816066|ref|ZP_06774709.1| Polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294328665|gb|EFG10308.1| Polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 369 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 78 GGKAVRPALALLSAEAAGAPPEIGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 135 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A EI+ T +L + ++ GQ DI Sbjct: 136 KVHGPAQAILVGDALFALANEILLELDTVEAGRATRRLTTATLR------LIDGQAQDIS 189 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 190 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALEAYGYHLGLAFQAVD 249 Query: 226 DLL 228 DLL Sbjct: 250 DLL 252 >gi|242278239|ref|YP_002990368.1| dimethylallyltranstransferase [Desulfovibrio salexigens DSM 2638] gi|242121133|gb|ACS78829.1| Dimethylallyltranstransferase [Desulfovibrio salexigens DSM 2638] Length = 322 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 15/192 (7%) Query: 44 RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 R+ LL GK+IR L A + ++E +H +L+HDD+ +D+ +RR Sbjct: 35 RHVLLAPGKRIRPVLTILSARGLGYGKDDIYPLAGSLELLHAATLLHDDI--LDDADLRR 92 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G H+ + I+AG+ LL A +I + K I S L G+ + G Sbjct: 93 GVEASHLVFGTTETILAGDVLLALANKIGADYG---KPRISSVLA------SGIMATVEG 143 Query: 163 QMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++L+I + ++ I KT L+ +C GAI+A + ++ + FG N+GI Sbjct: 144 EILEIAHISEPLMNRDTYMDIIIGKTARLIETSCRLGAILASDDRAMEDAVGNFGLNMGI 203 Query: 220 IFQLADDLLDCE 231 FQL DD LD E Sbjct: 204 AFQLVDDALDYE 215 >gi|116749021|ref|YP_845708.1| trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans MPOB] gi|116698085|gb|ABK17273.1| Trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans MPOB] Length = 323 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 23/238 (9%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLV 58 M + S++Q + +RI+ ++ LLL T+ L+S + RY + GGK++R L+ Sbjct: 1 MKESIISRIQPDLRRIEEEIE-LLLTTSVP--------LISVVGRYIMGSGGKRLRPLLL 51 Query: 59 TECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 A L + +H +L V E IH SL+HDD+ +D+ RR +P + + Sbjct: 52 VLSARLCGYQGSHDASLAV--VFEFIHAASLLHDDV--VDHAKFRRNRPAANTVWGNQAV 107 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176 ++ G+ L + A + + + S+ ++ LQ ++ + I E + Sbjct: 108 VLVGDFLYSKAIHLTVGYNSLRMLEVLSEATTRMSEGEVLQ------LVHADNIEISEEE 161 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + KT L+ AC+ GA+ ++ L+ +G NLGI FQL DD LD D+ Sbjct: 162 YIEVITRKTAVLISAACQIGALFGGNDVQREKALKTYGHNLGIAFQLVDDTLDYTGDV 219 >gi|116629023|ref|YP_814195.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC 33323] gi|116094605|gb|ABJ59757.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC 33323] Length = 338 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 13/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ +IE +H +LIHDD+ +D +R G+P++ +Y + A+ AG+ L+ + ++S Sbjct: 82 KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLVALSLTLLS- 138 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190 +N +S L + +Q +L G+ + + I E + K KTG L Sbjct: 139 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFG 191 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AC GA + + + + FGE LG FQL DD+LD Sbjct: 192 LACFIGAYESGTKVTKALKTKKFGEYLGQAFQLRDDILD 230 >gi|302391328|ref|YP_003827148.1| trans-hexaprenyltranstransferase [Acetohalobium arabaticum DSM 5501] gi|302203405|gb|ADL12083.1| Trans-hexaprenyltranstransferase [Acetohalobium arabaticum DSM 5501] Length = 335 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 22/202 (10%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 ++RLL+A GGK++R LV L + + + +GA++E +H +LIHDD+ + Sbjct: 36 SNRLLNA------GGKRLRPLLVLLSGKLNDHSAQDLISIGASVELLHMATLIHDDV--I 87 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN RR + T++ + A+++G+ L T A +++ D I + + + Sbjct: 88 DNSLHRRSENTINQDWGNKVAVLSGDLLYTQALKLLVEHGN---DEI-------VNYMLD 137 Query: 156 LQGML--GGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLR 211 + G++ G + + +++ I K+ KT L+ +C+ GA+++ + + Sbjct: 138 IVGLICEGEAKQAVTNHDLNQDMKDYINKITKKTALLIGASCKLGAMVSQVDAKKAAAME 197 Query: 212 CFGENLGIIFQLADDLLDCEED 233 +G+NLGI FQ+ +DL D D Sbjct: 198 SYGKNLGIAFQIINDLNDIVAD 219 >gi|56698924|gb|AAW23160.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis] Length = 379 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 37/212 (17%) Query: 45 YALLGGKKIR-SFLVTEC-ASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGY 99 + L GGK++R SF T + + N A +R AA+E + +L+HDD+ +D Sbjct: 64 FVLRGGKRVRPSFAWTGWLGAGGDPNGSGADAVIRACAALELVQACALVHDDI--IDAST 121 Query: 100 IRRGKPTVHIQYD----------------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 RRG PTVH++++ E AI+ G+ L +A ++I R Sbjct: 122 TRRGFPTVHVEFEDQHRGEEWSGDSAHFGEAVAILLGDLALAWADDMIRESGISPDAAAR 181 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DET--QVFMIQKMKTGALMCFACES----G 196 + S +LGGQ LDI +E DET + + KT A + E G Sbjct: 182 VSPVWSAMRTE----VLGGQFLDISNEARGDETVEAAMRVNRYKTAA---YTIERPLHLG 234 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A + A + R FG ++GI FQL DDLL Sbjct: 235 AALFGADAELIDAYRTFGTDIGIAFQLRDDLL 266 >gi|293390542|ref|ZP_06634876.1| heptaprenyl diphosphate synthase component II [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951076|gb|EFE01195.1| heptaprenyl diphosphate synthase component II [Aggregatibacter actinomycetemcomitans D7S-1] Length = 329 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + A+ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARALGFDGQQAITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL+ ++M T N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QLESLKILRIMADAT-NVLAEGEVQ-QLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A A +++ L+ +G LG FQL DD+L Sbjct: 161 DPQTSEENYMRVIYSKTARLFEVAAQAAAIIAGADDTQEKALQNYGRYLGTAFQLVDDVL 220 Query: 229 D 229 D Sbjct: 221 D 221 >gi|261868528|ref|YP_003256450.1| octaprenyl-diphosphate synthase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413860|gb|ACX83231.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Aggregatibacter actinomycetemcomitans D11S-1] Length = 329 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + A+ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARALGFDGQQAITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL+ ++M T N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QLESLKILRIMADAT-NVLAEGEVQ-QLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A A +++ L+ +G LG FQL DD+L Sbjct: 161 DPQTSEENYMRVIYSKTARLFEVAAQAAAIIAGADDTQEKALQNYGRYLGTAFQLVDDVL 220 Query: 229 D 229 D Sbjct: 221 D 221 >gi|257459693|ref|ZP_05624802.1| putative hexaprenyl pyrophosphate synthetase [Campylobacter gracilis RM3268] gi|257443118|gb|EEV18252.1| putative hexaprenyl pyrophosphate synthetase [Campylobacter gracilis RM3268] Length = 330 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 58/249 (23%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74 +ID I+ + ++ DRL GKK+RS L+ A +LR Sbjct: 4 QIDLIMKSFIADCGYEPASEMFDRLSP--------GKKLRSKLLLNIAR----KDEKSLR 51 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA-FEIISS 133 + A IE I SL+HDD+ +D +RRGKP+++ Y A++ G+ L + A FE+ Sbjct: 52 LCAIIELIQAASLLHDDV--IDESSVRRGKPSINATYGSKNAVMLGDILYSKAYFEL--- 106 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM-IQKMKTGALMC 190 ++ + I + L L++T + G+++D+ D+F D+ ++ + +KT AL+ Sbjct: 107 --SKFESRIAAALSLAVTK------LAVGELMDVSLSDDFNDDASKYLQMIYLKTSALIE 158 Query: 191 FACESGAIMAHAS-------------QNEKE----------------RLRCFGENLGIIF 221 GA + S +NE E + +G+NLG+ F Sbjct: 159 EVARCGAFLKFGSAENRGEISDMSGKKNEGEIPSAAKDHNKISSASAKFGKYGKNLGLAF 218 Query: 222 QLADDLLDC 230 Q+ DD+LD Sbjct: 219 QIIDDILDV 227 >gi|119714798|ref|YP_921763.1| trans-hexaprenyltranstransferase [Nocardioides sp. JS614] gi|119535459|gb|ABL80076.1| Trans-hexaprenyltranstransferase [Nocardioides sp. JS614] Length = 334 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 18/190 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAA---IECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+ R LV A H A V A +E H SL HDD+ MD +RRG Sbjct: 54 GGKRFRPLLVLLAAE--TGEHPDADEVITAACVVELTHLASLYHDDV--MDEAELRRGAV 109 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQ 163 + + ++D AI+ G+ L + + E+ + D +R Q L L+ + G Sbjct: 110 SANARWDNHVAILTGDFLFSKSSELTAELG---PDAVRVQARTFTRLVEGQILETVQPGP 166 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D ++D + KTG+L+ + GA AS+ +E L +GE +G FQL Sbjct: 167 GEDPLAHYLD------VVAGKTGSLIATSAHYGARFGGASREVEEALTAYGEIVGSAFQL 220 Query: 224 ADDLLDCEED 233 +DD+LD D Sbjct: 221 SDDILDIASD 230 >gi|326444408|ref|ZP_08219142.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 355 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 64 GGKAVRPALALLSAEAAGAPPEIGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 121 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A EI+ T +L + ++ GQ DI Sbjct: 122 KVHGPAQAILVGDALFALANEILLELDTVEAGRATRRLTTATLR------LIDGQAQDIS 175 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 176 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALEAYGYHLGLAFQAVD 235 Query: 226 DLL 228 DLL Sbjct: 236 DLL 238 >gi|298490219|ref|YP_003720396.1| solanesyl diphosphate synthase ['Nostoc azollae' 0708] gi|298232137|gb|ADI63273.1| solanesyl diphosphate synthase ['Nostoc azollae' 0708] Length = 323 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L++ L R+ E IH SL+HDD+ +D +RRG P Sbjct: 44 GGKRIRPAIVLLISRATMLEKDITPRHRRLAEITEMIHTASLVHDDV--VDESNVRRGVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH + A++AG+ L + +++ + S++++ L QG L Sbjct: 102 TVHSLFGNRIAVLAGDFLFAQSSWYLANLDNLDVVKLLSEVIMDLAAGEIQQG------L 155 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D + KT +L+ + ++ +++ SQ E L +G++LG+ FQ+ D Sbjct: 156 NRFDTNLSTETYLKKSYYKTASLIANSSKAAGLLSEVSQKSAENLYNYGKHLGLAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|13383243|dbj|BAB39472.1| putative GGPP synthase 1 [Metaplexis japonica] Length = 127 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 3/127 (2%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H + E A++AG+ LL +AFE I++ ++ + L +IG Sbjct: 1 NDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEYIATATAGVEPARVLAAIGELAKSIGT 60 Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++D+ + Q+ I KT AL+ + GAI+ +Q E E+LR F Sbjct: 61 EGLVAGQVVDLSCTGKSNVGLDQLEFIHIHKTAALLEASVVLGAILGGGTQEEVEKLRRF 120 Query: 214 GENLGII 220 +G++ Sbjct: 121 ARCIGLL 127 >gi|304438325|ref|ZP_07398266.1| heptaprenyl diphosphate synthase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368691|gb|EFM22375.1| heptaprenyl diphosphate synthase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 321 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 13/193 (6%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L A + + A+ V A+E IH SL+HDD+ +D RRG T Sbjct: 38 GGKRLRPALFLLAARGGASFDRARAMPVAVALELIHTASLVHDDV--IDEADTRRGAETT 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLD 166 + ++ AI++G+ + AF++++ ++ + L+ +L+ LQ Q+ Sbjct: 96 NAKWGNQIAILSGDYIFARAFKLVAEEGYDSSVYVKLAHLVCTLSEGEILQDHTVYQIPT 155 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 +D + + + KT + CE G + S + ++ +G ++G+ FQ+ DD Sbjct: 156 GEDAYYERI------RKKTADFLEICCELGGFIGGMSPADTAQMAEYGRDIGMAFQITDD 209 Query: 227 LLD---CEEDLPK 236 LLD ED+ K Sbjct: 210 LLDFRRSSEDIGK 222 >gi|75907691|ref|YP_321987.1| polyprenyl synthetase [Anabaena variabilis ATCC 29413] gi|75701416|gb|ABA21092.1| Polyprenyl synthetase [Anabaena variabilis ATCC 29413] Length = 323 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L++ L R+ E IH SL+HDD+ +D +RRG P Sbjct: 44 GGKRIRPAIVLLISRATMLEQDITPRHRRLAEITEMIHTASLVHDDV--VDESEVRRGVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH + AI+AG+ L + +++ + S++++ L QG L Sbjct: 102 TVHSLFGNRIAILAGDFLFAQSSWYLANLDNLQVVKLLSEVIMDLATGEIQQG------L 155 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D I KT +L+ + ++ +++ S E L +G +LGI FQ+ D Sbjct: 156 NRFDASISIENYIEKSYYKTASLIANSSKAAGLLSEVSPETAEHLYAYGRHLGIAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|242309903|ref|ZP_04809058.1| polyprenyl synthetase [Helicobacter pullorum MIT 98-5489] gi|239523200|gb|EEQ63066.1| polyprenyl synthetase [Helicobacter pullorum MIT 98-5489] Length = 306 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 12/156 (7%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A IE I SL+HDD+ +DN +RR KP+++ + AI+ G+ L + AF T Sbjct: 56 AIIEMIQSASLLHDDV--IDNATMRRSKPSINAIAGDKNAIMLGDILYSKAF----CELT 109 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKTGALMCFAC 193 Q ++N ++ + N + + G+M D++ +F +E + + + KT +L+ Sbjct: 110 QFQENF--PMIPRIVAN-AVTTLAIGEMEDVELAKQFNANEAKYLTMVEHKTASLIESTA 166 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A ++ +Q E + R +G NLGI FQ+ DD+LD Sbjct: 167 YAAAFLSGRNQEEAKSFRIYGRNLGIAFQIIDDVLD 202 >gi|167039330|ref|YP_001662315.1| polyprenyl synthetase [Thermoanaerobacter sp. X514] gi|256752210|ref|ZP_05493075.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|300913970|ref|ZP_07131287.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561] gi|307725346|ref|YP_003905097.1| polyprenyl synthetase [Thermoanaerobacter sp. X513] gi|166853570|gb|ABY91979.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514] gi|256748938|gb|EEU61977.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|300890655|gb|EFK85800.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561] gi|307582407|gb|ADN55806.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513] Length = 322 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK +R V + L + AAIE +H +L+HDD+ +DN IRR KPT+ Sbjct: 44 SGKMLRPAFVILAGKFGEYDRKKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQ 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL--QGMLGGQMLD 166 +Y + A+ G+ L + +F ++S DNI + ++ + +G +G Q Sbjct: 102 AEYGKDYAVFIGDFLFSESFLLLS-------DNIAISNLKKVSKVVSKICKGEIG-QFES 153 Query: 167 IQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ ID T ++++ KT AL + GA + +N + L G N+G+ FQ+ Sbjct: 154 RRN--IDITINDYLRRIAAKTAALFALSFYVGAYESKCDENLAKALGSIGYNIGMAFQII 211 Query: 225 DDLLD 229 DD+LD Sbjct: 212 DDILD 216 >gi|313884478|ref|ZP_07818239.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8] gi|312620262|gb|EFR31690.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8] Length = 328 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 27/230 (11%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLF 65 LQ N K++ ++D ++ A+ TQ L +A GGK +R FL TE Sbjct: 11 LQANIKQVQALIDQRVV-VANPQITQAVQALNAA------GGKFLRPAFFFLFTEFGPRV 63 Query: 66 --NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + L+V A++E +H +LIHDD+ +D+ +RR + T+ ++ + A+ G+ L Sbjct: 64 KDHTQKEKLLKVAASLEILHIATLIHDDI--IDDSPLRRSQVTIQAKFGKDVAVYTGDLL 121 Query: 124 LTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-QMLDIQDEFIDETQVFMIQ 181 T FE+I + +T I +Q M + L G L Q+ QD+ ID+ +Q Sbjct: 122 FTIFFELILETMQTSDYMAINAQAMKKI-----LMGELDQMQLYYKQDQTIDD----YLQ 172 Query: 182 KM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + KT AL A + GA A + G +G+ FQ+ DD+LD Sbjct: 173 AIAGKTAALFALAAQEGAYFGGADNHVVALAETIGHKIGMAFQILDDILD 222 >gi|167622844|ref|YP_001673138.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] gi|167352866|gb|ABZ75479.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] Length = 323 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLSILAARAIDYKGDSHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRKTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ T+LK +++ T+ + +L Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELKCLDVLEILADATNVLAEGEVL--QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A + + L +G+ LG FQL DDLL Sbjct: 155 DPDTTEDSYMRVIYCKTAKLFEAATRLAGLLADSPIEVQTALAEYGKYLGTAFQLTDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTAD 219 >gi|159039961|ref|YP_001539214.1| polyprenyl synthetase [Salinispora arenicola CNS-205] gi|157918796|gb|ABW00224.1| Polyprenyl synthetase [Salinispora arenicola CNS-205] Length = 344 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 22/232 (9%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 ++ GLP + + ++ L D + +A T+ LL A GGK+ R LV Sbjct: 21 VDAGLPDSVLRVLEGVEAALRDDV-ASADPFVTEAARHLLDA------GGKRFRPLLVAL 73 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + + +E H +L HDD+ MD +RRG P+ + ++ AI+ G Sbjct: 74 GAQFGDPTRAQVVPAAVVVELTHLATLYHDDV--MDEAPVRRGAPSANSRWTNSVAILVG 131 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVF 178 + L A +I + T+ ++++ L H GQ+ + +D Sbjct: 132 DYLFARAADISADLGTEAV-RLQARTFARLVH---------GQIAETVGPRPGVDPVAHH 181 Query: 179 M-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + KTG+L+ + G + A L +GE +G+ FQL+DDLLD Sbjct: 182 LHVIAEKTGSLIATSARFGGLFGGADPRYVAALAGYGETIGVAFQLSDDLLD 233 >gi|13541093|ref|NP_110781.1| geranylgeranyl pyrophosphate synthase [Thermoplasma volcanium GSS1] gi|14324478|dbj|BAB59406.1| farnesyl pyrophosphate synthase [Thermoplasma volcanium GSS1] Length = 354 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 28/211 (13%) Query: 38 RLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 R++ IR Y GGK++R + LF+ +IE Y LIHDD+ +D Sbjct: 41 RVIKIIRDYTEGGGKRLRPIFMILGYRLFSPEEKGIFDASISIELAQSYLLIHDDV--ID 98 Query: 97 NGYIRRGKPTVHIQYD--------------EVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 +RRGKP++HI+ + E AI+AG+ +YA E + ++ + Sbjct: 99 KSDVRRGKPSMHIRLEDAFVAGCPQSRSTAEGLAIVAGDLAESYAHEALLRSGFYSENLV 158 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFA-CESGA 197 ++ L LS T I + G GQ LDI D+F +E + + KT GA Sbjct: 159 KADLELSKT--IEMTGY--GQFLDILSTTMDDF-NEGDLIRLHLWKTAKYTLEGPLAMGA 213 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228 I++ ++ + LR +G LGI FQL DD+L Sbjct: 214 ILS-GTEYDITALREYGRVLGIAFQLKDDIL 243 >gi|10801558|dbj|BAB16692.1| GGPP synthase 2 [Hevea brasiliensis] Length = 126 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 2/126 (1%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H + E TAI+AG+ LL+++FE +++ + + + + L +G Sbjct: 1 NDDLRRGKPTNHKMFGEETAILAGDALLSFSFEHVAAATKNVSPDRVVRAIAELGSAVGA 60 Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G++ GQ++DI+ E T + I KT L+ A GAI+ A ER+R + Sbjct: 61 AGLVAGQIVDIESEGKQVTLEDLEYIHINKTSKLLEAAVVCGAIIGGADDESTERVRKYA 120 Query: 215 ENLGII 220 +G++ Sbjct: 121 RCIGLL 126 >gi|256375538|ref|YP_003099198.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827] gi|255919841|gb|ACU35352.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827] Length = 356 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 37/212 (17%) Query: 45 YALLGGKKIRSFLVTEC--ASLFNVNHLTALRVGAAI---ECIHCYSLIHDDLPSMDNGY 99 + L GGK++R A+ + + +A RV A+ E I +LIHDDL MD Sbjct: 46 FVLSGGKRVRPTFAWWGWRAAGGDPDQESAGRVLTAVSSLELIQACALIHDDL--MDASE 103 Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISS---PKTQLKD 140 RRG+PT+H+Q+ A++ G+ L +A +++ + P L+ Sbjct: 104 TRRGRPTIHVQFARRHRENSWLSSPEQFGLAAAVLIGDVALAWADDMLFAAGLPTDALQ- 162 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMC-FACESG 196 LSL ML GQ LD+ + + I ++KT A G Sbjct: 163 ------RLSLPWRDMRTEMLAGQYLDVLTQARGDASADAALRIDRLKTAAYTVERPLHMG 216 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A + S E LR FG ++G+ FQL DDLL Sbjct: 217 AAIGGGSAELIEGLRAFGRDIGVAFQLRDDLL 248 >gi|21223617|ref|NP_629396.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)] gi|256785271|ref|ZP_05523702.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|289769163|ref|ZP_06528541.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|9968700|emb|CAC05969.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)] gi|289699362|gb|EFD66791.1| polyprenyl synthetase [Streptomyces lividans TK24] Length = 386 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 17/156 (10%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H ++L+HDD+ MD RR +PT + + AI+AG+ L A + ++ Sbjct: 130 ELVHNFTLLHDDV--MDRDATRRHRPTAWTVFGDADAILAGDALQALALRLFAADPHPAS 187 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI------QDEF-IDETQVFMIQKMKTGALMCFA 192 ++L + + GQ D DE +DET ++ + KTGAL+ A Sbjct: 188 AAAATRLADCVME------LCEGQHADTAMERRPPDEVTLDET--LVMAEAKTGALLGCA 239 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 C GA+ A A+ + E L FG G+ FQL DD++ Sbjct: 240 CAVGALYAGAATEDVEALDAFGREAGMAFQLIDDVI 275 >gi|197104247|ref|YP_002129624.1| polyprenyl synthetase family protein [Phenylobacterium zucineum HLK1] gi|196477667|gb|ACG77195.1| polyprenyl synthetase family protein [Phenylobacterium zucineum HLK1] Length = 335 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 8/184 (4%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 K++R L A L + L++ AA+E IH +L+HDD+ +D+ +RRG+ H+ Sbjct: 55 AKRLRPLLTIAAARLAGARDDSCLKLAAAVEFIHTATLLHDDV--VDSSQLRRGRVAAHL 112 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + ++++ G+ L AFE++ + I ++ ++ LQ + LD+ Sbjct: 113 IWGAPSSVLVGDFLFARAFELMVGAGSMAALEILARASRVISEGEVLQ-LTRSHDLDLTQ 171 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 E E I KT L A E+GA+ A AS LR FG++LG+ FQL DD LD Sbjct: 172 EVYIE-----IIGAKTAELFAAAAEAGAVAAGASPERCRALRRFGQDLGLAFQLVDDALD 226 Query: 230 CEED 233 D Sbjct: 227 YSGD 230 >gi|283954169|ref|ZP_06371694.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 414] gi|283794448|gb|EFC33192.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 414] Length = 297 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 98/188 (52%), Gaps = 22/188 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GKK+RS L+ A + A ++ A+IE IH SL+HDD+ +D +RRG +V+ Sbjct: 29 SGKKLRSKLLLAIAEESEI----AFKICASIELIHLASLLHDDI--IDESELRRGSRSVN 82 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A++ G+ L + AF +S T+ +I S ++ L G+++D+ Sbjct: 83 AEFGTKNALMLGDILYSKAFYELSKVDTRFA-SIISDAVVKLAI---------GELMDVN 132 Query: 169 --DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++F I++ + KT L+ + GAI+A + + +G+NLG+ FQ+ D Sbjct: 133 LGEKFNINKEAYLKMIYNKTAILIEASARCGAILARLHEKD---FAEYGKNLGLAFQMID 189 Query: 226 DLLDCEED 233 D+LD + D Sbjct: 190 DILDIKSD 197 >gi|3410887|dbj|BAA32241.1| decaprenyl diphosphate synthase [Gluconobacter oxydans] Length = 315 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 14/190 (7%) Query: 49 GGKKIRSFLVTECASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R L A L +H + + A +E IH +L+HDD+ +D +RRG Sbjct: 30 GGKRLRPLLTLASARLCGYQPGPDHQRHVGLAACVEFIHTATLLHDDV--VDESTLRRGL 87 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + + + +++ G+ L +F+++++ + I S ++ LQ Sbjct: 88 ASANAVFGNKASVLVGDFLFARSFQLMTADGSLKVMAILSDASATIAEGEVLQ------- 140 Query: 165 LDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + +Q++ + ++ + KT AL AC GA++A + E+E L FG NLG+ FQL Sbjct: 141 MVVQNDLTTPVERYLEVIHGKTAALFAAACRVGAVVAERPEAEEEALERFGTNLGMAFQL 200 Query: 224 ADDLLDCEED 233 DD LD D Sbjct: 201 VDDALDYAAD 210 >gi|46143904|ref|ZP_00133901.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209449|ref|YP_001054674.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae L20] gi|307258100|ref|ZP_07539852.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|126098241|gb|ABN75069.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306863463|gb|EFM95394.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 331 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A+ + A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++ ++S N +G + Q++++ Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTDV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+A ++ + L+ +G LG FQL DD+L Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|88798952|ref|ZP_01114534.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297] gi|88778432|gb|EAR09625.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297] Length = 322 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R LV L + +HL A A IE +H +L+HDD+ +D +RRG+ Sbjct: 43 GGKRMRPLLVLLAGQLNGQLTDRHHLLA----AIIEFLHTATLLHDDV--VDKSDMRRGR 96 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T + + +++ G+ L +FE++ +L + Q + T I ++ Q+ Sbjct: 97 ATANANWGNAPSVLVGDFLYARSFEML----VELGNFDVMQSLSQATRVIAEGEVM--QL 150 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +++++ I E Q + K KT L + E+ +++ + L +G NLG+ FQL Sbjct: 151 MNVKNPDITEAQYMEVIKGKTAILFKASAETSGLISGYDRTSVNALADYGLNLGLAFQLI 210 Query: 225 DDLLDCEED 233 DD LD D Sbjct: 211 DDALDYAGD 219 >gi|326524578|dbj|BAK00672.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 394 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 21/225 (9%) Query: 16 IDTILDDLLLQTASHMQT---QHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNV 67 +D + DDLL + +++++ N L+SA GGK++R FLV+ A + + Sbjct: 76 LDVVSDDLL-KLNNNLKSLIGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEVAGL 134 Query: 68 NHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + LT R+ IE IH SLIHDD+ +D+ +RRGK T+H Y A++AG+ + Sbjct: 135 SELTTEHKRLAEIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRIAVLAGDFMFA 192 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + +++ + + SQ++ + I Q L + + D + K Sbjct: 193 QSSWFLANLENIEVIKLISQVIKDFASGEIKQQSTLFDCDVTLDDYLLK-------SYYK 245 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T +L+ + S AI + S E++ +G NLG+ FQ+ DD+LD Sbjct: 246 TASLLASSTRSAAIFSGVSTTVCEQMYEYGRNLGLSFQVVDDILD 290 >gi|320007257|gb|ADW02107.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331] Length = 367 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 76 GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T +L + + ++ GQ DI Sbjct: 134 KVHGPAQAILVGDALFALANEVLLELGTVEAGRAARRLTTAS------RKLIDGQAQDIS 187 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 188 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVD 247 Query: 226 DLL 228 DLL Sbjct: 248 DLL 250 >gi|67921668|ref|ZP_00515186.1| Trans-hexaprenyltranstransferase [Crocosphaera watsonii WH 8501] gi|67856780|gb|EAM52021.1| Trans-hexaprenyltranstransferase [Crocosphaera watsonii WH 8501] Length = 323 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 22/213 (10%) Query: 30 HMQTQHNDRLLSAIRYALLG----------GKKIRS--FLVTECASLFNVNHLTALRVGA 77 H+ T + RL+ A R+ +LG GK+IR L+ A++ ++ + R A Sbjct: 16 HLLTDNLKRLVGA-RHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLDLEITSRHRRLA 74 Query: 78 AI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 I E IH SL+HDD+ +D +RR PTV+ +D A++AG+ L + +++ Sbjct: 75 EITEMIHTASLVHDDV--VDEAALRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDN 132 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196 + S+++ QG+ + ++D++ KT +LM + +S Sbjct: 133 LQVVKLLSEVIRDFAEGEIFQGINRFDTSLTLEAYLDKSY------YKTASLMANSSKSA 186 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AI++ AS + L +G+ LG+ FQ+ DD+LD Sbjct: 187 AILSDASAEVIDSLYNYGKYLGLAFQIVDDILD 219 >gi|289580127|ref|YP_003478593.1| dimethylallyltranstransferase [Natrialba magadii ATCC 43099] gi|289529680|gb|ADD04031.1| Dimethylallyltranstransferase [Natrialba magadii ATCC 43099] Length = 349 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%) Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIRSF--------------LVTECASLFNVN--HLTA 72 + Q +RL A RY L GGK++R L T+ S ++ + Sbjct: 29 ELPVQQPERLYEASRYLLDAGGKRLRPAVLLAAAEALADVEPLSTDYRSFPTLSGEEIDM 88 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + ++E I ++LIH MD+ +RRG P VH +YD TAI+AG+ L + AFEI+ Sbjct: 89 MDAAVSVEVIQSFTLIH--DDIMDDDDLRRGVPAVHREYDLETAILAGDTLYSKAFEIML 146 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGAL 188 + + +L+ T + GQ LD+ +D E + M+++ KT L Sbjct: 147 ETGADPSRMVDALDVLATTCT----KICEGQALDVTFEKRDNVAPEEYLEMVEQ-KTAVL 201 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + AI+ A Q + L +G ++G FQ+ DD+LD Sbjct: 202 YAASACLPAILQGADQETIDALYGYGLDIGRAFQIQDDVLD 242 >gi|110669136|ref|YP_658947.1| multifunctional long-chain (E)-prenyl diphosphate synthase [Haloquadratum walsbyi DSM 16790] gi|109626883|emb|CAJ53352.1| probable multifunctional long-chain (E)-prenyl diphosphate synthase [Haloquadratum walsbyi DSM 16790] Length = 271 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 13/188 (6%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 AL GGK++R + A+ A+E +H SL+ DD+ +D +RRG Sbjct: 26 ALSGGKRVRPAVTILACEACGGAPEDAVDFAVAVELVHNASLVVDDI--IDRSDVRRGTE 83 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + + A+IA +GLL AF ++++ + + I ++ M+ L G+ Sbjct: 84 SAWSAFGHGPALIASDGLLGEAFALLAADEHATE--IVAESMVELGE---------GEAT 132 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ +E + + + KTGAL + E GA+ A + + E +G+ FQ+ D Sbjct: 133 ELVARPTNEAEYMQLARRKTGALFRASAEVGAVAGGADPFTIDLFGEYAERVGVAFQIRD 192 Query: 226 DLLDCEED 233 D+LD D Sbjct: 193 DVLDATAD 200 >gi|254173799|ref|ZP_04880471.1| hypothetical protein TAM4_2178 [Thermococcus sp. AM4] gi|214032491|gb|EEB73321.1| hypothetical protein TAM4_2178 [Thermococcus sp. AM4] Length = 306 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 11/181 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + AL + +AIE IH SL+HDD+ +D RR PTV Sbjct: 30 GGKRIRPRITLAVAKGLGLEEKDALDLASAIELIHTASLVHDDV--IDLAEKRRNNPTVV 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +++ A+++G+ L A II+ K ++ D + + + I + + G LD++ Sbjct: 88 MRWGPELAVLSGDFLFVRALRIIAGKKVEMVDYVAKVVEDMVKAEILQEAVRGSVHLDLE 147 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I KTG L F + + E L G +G FQ+ DD+L Sbjct: 148 -------TYYRIIDGKTGRL--FGASFALPAYYHGKTYWEELDRAGTLVGRAFQIVDDVL 198 Query: 229 D 229 D Sbjct: 199 D 199 >gi|53726074|ref|YP_104070.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344] gi|121600728|ref|YP_991797.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1] gi|124384831|ref|YP_001027290.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229] gi|126441901|ref|YP_001060502.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668] gi|126448324|ref|YP_001082773.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247] gi|52429497|gb|AAU50090.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344] gi|121229538|gb|ABM52056.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1] gi|124292851|gb|ABN02120.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229] gi|126221394|gb|ABN84900.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668] gi|126241194|gb|ABO04287.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247] Length = 330 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A N + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPALLLLVAGALGENTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 109 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A GA++A A + +G +G FQ+ DD L Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 222 Query: 229 D 229 D Sbjct: 223 D 223 >gi|190151351|ref|YP_001969876.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251769|ref|ZP_07337940.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246933|ref|ZP_07528998.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249070|ref|ZP_07531077.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251268|ref|ZP_07533189.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255915|ref|ZP_07537716.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260368|ref|ZP_07542075.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307264706|ref|ZP_07546286.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189916482|gb|ACE62734.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649199|gb|EFL79384.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306852218|gb|EFM84458.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854358|gb|EFM86554.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856784|gb|EFM88919.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861183|gb|EFM93176.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865619|gb|EFM97500.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306870018|gb|EFN01782.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 331 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A+ + A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++ ++S N +G + Q++++ Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTDV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+A ++ + L+ +G LG FQL DD+L Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|226360248|ref|YP_002778026.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4] gi|226238733|dbj|BAH49081.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4] Length = 385 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 31/209 (14%) Query: 45 YALLGGKKIR-SFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + L GGK++R +F T LR +A+E + +L+HDD+ +D Sbjct: 70 FVLRGGKRVRPAFAWTGWLGAGGDPRGPGAGPVLRACSALELVQACALVHDDI--IDAST 127 Query: 100 IRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 RRG PTVH++++E AI+ G+ L +A ++I + R Sbjct: 128 TRRGFPTVHVEFEEQHRAGRWSGDSAHFGEGVAILLGDLALAWADDMIRESGITPDQSAR 187 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GAIM 199 + S +LGGQ LDI +E + + K+ + E GA + Sbjct: 188 ISPVWSAMRT----EVLGGQFLDISNEVRADESIDAAMKVNRYKTAAYTIERPLHLGAAL 243 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228 A A + R FG ++GI FQL DDLL Sbjct: 244 AGADDSLVSAYRRFGTDIGIAFQLRDDLL 272 >gi|291009770|ref|ZP_06567743.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 274 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 19/161 (11%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H +SL+HDD+ MD RR +PTV + AI+AG+ +L A I+S+ Sbjct: 24 ELLHNFSLLHDDV--MDGDLTRRHRPTVWSLFGTSNAILAGDAILGLAPRILSATG---- 77 Query: 140 DNIRSQLMLSLTHNIG--LQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFA 192 S+ L+ G + + GQ DI F + V + + KTG L+ + Sbjct: 78 ----SEHALTAIDWFGKCVVKLCEGQAADIS--FSERVDVGIDACVAMARAKTGELLGTS 131 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 C G + A A + + LR FG +G+ FQL DDLL D Sbjct: 132 CALGGLFAGADRTQITALREFGSEIGLAFQLVDDLLGIWGD 172 >gi|165977439|ref|YP_001653032.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877540|gb|ABY70588.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 331 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A+ + A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++ ++S N +G + Q++++ Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTDV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+A ++ + L+ +G LG FQL DD+L Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|238561270|ref|ZP_00442352.2| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4] gi|251766623|ref|ZP_04819732.1| polyprenyl synthetase [Burkholderia mallei PRL-20] gi|254178909|ref|ZP_04885563.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399] gi|254202791|ref|ZP_04909154.1| polyprenyl synthetase [Burkholderia mallei FMH] gi|254208133|ref|ZP_04914483.1| polyprenyl synthetase [Burkholderia mallei JHU] gi|254357663|ref|ZP_04973937.1| polyprenyl synthetase [Burkholderia mallei 2002721280] gi|147747038|gb|EDK54115.1| polyprenyl synthetase [Burkholderia mallei FMH] gi|147752027|gb|EDK59094.1| polyprenyl synthetase [Burkholderia mallei JHU] gi|148026727|gb|EDK84812.1| polyprenyl synthetase [Burkholderia mallei 2002721280] gi|160694823|gb|EDP84831.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399] gi|238524982|gb|EEP88412.1| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4] gi|243065293|gb|EES47479.1| polyprenyl synthetase [Burkholderia mallei PRL-20] Length = 332 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A N + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPALLLLVAGALGENTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 111 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A GA++A A + +G +G FQ+ DD L Sbjct: 165 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|262341076|ref|YP_003283931.1| polyprenyl synthetase family protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272413|gb|ACY40321.1| polyprenyl synthetase family protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 325 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%) Query: 33 TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 T+ N L+ I + ++ GK IR V A + IE IH +L+HD Sbjct: 27 TKSNVSLIDQITHYIIHRKGKLIRPIFVFLIAKMLGNIQKKTYHTACLIELIHTATLVHD 86 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ +DN +RRG +++ + A++ G+ LL+ + + + +N L+ + Sbjct: 87 DV--IDNSSLRRGSFSINAIWKNKIAVLIGDYLLSKSLLLAT-------NNNYYDLLKII 137 Query: 151 THNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 I + M G++L +++ I E I KT +L+ +CE GA + + Sbjct: 138 CQTI--KDMSEGELLQMEESDKLNITEKTYNQIIYHKTASLIAASCECGARSVNVDEKTA 195 Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232 ++R FG +GI FQ+ DDL D EE Sbjct: 196 LKMRKFGLFVGIAFQIKDDLFDYEE 220 >gi|310658722|ref|YP_003936443.1| farnesyltransferase [Clostridium sticklandii DSM 519] gi|308825500|emb|CBH21538.1| putative Farnesyltransferase [Clostridium sticklandii] Length = 311 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 87/163 (53%), Gaps = 6/163 (3%) Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 H A+ + AIE H +L+HDD+ +D+ RRG ++ ++D+ TA+I G+ +L A Sbjct: 58 HEDAINLAVAIELFHLATLVHDDI--IDDSPKRRGMDSLQSRFDKKTAVICGDYILAMAI 115 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E+ + K +KD + + + ++ L ++ Q ++ + + + I + KT AL Sbjct: 116 EL--ALKVDIKDEYKKYSLANYAKSVCLGELM--QDTNLFNYNLSLKRYLTIIRGKTAAL 171 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A SGAI+ ++ + + G +G+IFQ++DD +D E Sbjct: 172 FEAAFVSGAIVLGEPKSNVDLYKNIGRYIGMIFQMSDDCMDYE 214 >gi|111018119|ref|YP_701091.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1] gi|110817649|gb|ABG92933.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1] Length = 330 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 31/209 (14%) Query: 45 YALLGGKKIR-----SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + L GGK++R + V + LR +A+E + +L+HDD+ +D Sbjct: 15 FVLRGGKRVRPAFAWTGWVGAGGDARGPDAGPVLRACSALELVQACALVHDDI--IDAST 72 Query: 100 IRRGKPTVHIQY----------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 RRG PTVH+++ E AI+ G+ L +A ++I + R Sbjct: 73 TRRGFPTVHVEFAEQHRAGAWSGDSAHFGEGVAILLGDLALAWADDMIRESGITPDASAR 132 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GAIM 199 + S +LGGQ LDI +E + + K+ + E GA + Sbjct: 133 ISPVWSAMRTE----VLGGQFLDISNEARADESIVAAMKVNRYKTAAYTIERPLHLGAAL 188 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228 A A R FG ++GI FQL DDLL Sbjct: 189 AGADDTLVSAYRRFGTDIGIAFQLRDDLL 217 >gi|114319994|ref|YP_741677.1| trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1] gi|114226388|gb|ABI56187.1| Trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1] Length = 322 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A +++ A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLAARAAGYRGEHHIKLAAVVEFIHTATLLHDDV--VDESTLRRGQDTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L T AFE++ ++ Q+M T+ I ++ Q+L+ Sbjct: 101 SIWGNEAAVLVGDFLYTRAFEMM----VEVGLLPIMQVMARTTNTIAEGEVM--QLLNCH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + KT +L AC G +A Q + + L +G +LG +QL DD L Sbjct: 155 DPDVSEARYRDVIYRKTASLFEAACCLGGTIAGLPQAQTDHLAAYGLHLGTAYQLVDDAL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|254230032|ref|ZP_04923431.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] gi|151937420|gb|EDN56279.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] Length = 287 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 7 GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 64 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L +++ ++S N+ +G + Q+++ Sbjct: 65 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSNAVNVIAEGEVQ-QLMNCN 118 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A ++ + ++ +G+ LG FQL DD++ Sbjct: 119 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVM 178 Query: 229 DCEED 233 D D Sbjct: 179 DYTSD 183 >gi|303250376|ref|ZP_07336575.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253685|ref|ZP_07535552.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650846|gb|EFL81003.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306858921|gb|EFM90967.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 331 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A+ + A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++ ++S N +G + Q++++ Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTDV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+A ++ + L+ +G LG FQL DD+L Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|302541341|ref|ZP_07293683.1| polyprenyl synthetase [Streptomyces hygroscopicus ATCC 53653] gi|302458959|gb|EFL22052.1| polyprenyl synthetase [Streptomyces himastatinicus ATCC 53653] Length = 365 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + A+E +H +SL+HDDL MD RR + TV Sbjct: 72 GGKAVRPALALLSAQAAGADPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 129 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A EI+ T +L S T ++ GQ DI Sbjct: 130 KVHGPAQAILVGDALFALAGEILLELGTAEAGRATRRLT-SATRK-----LIDGQAQDIS 183 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 184 YEHRERVTVEECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVD 243 Query: 226 DLL 228 D+L Sbjct: 244 DVL 246 >gi|319443088|ref|ZP_07992244.1| putative polyprenyl diphosphate synthase [Corynebacterium variabile DSM 44702] Length = 338 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 26/231 (11%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRY--------ALLGGKKIR---SFLVTECASLF 65 D L+D + + + +++ D L + + AL GGK+ R + L + S Sbjct: 16 DAALNDFIAEGMTRVESTLQDSLSTGESFLTDKVQHLALAGGKRFRPMFALLASRYGSTP 75 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 T + +E H +L HDD+ MD RRG + + ++D AI+AG+ + Sbjct: 76 ETAAQTVVNAAVVVELTHLATLYHDDV--MDEADRRRGSESANARWDNSVAILAGDFIFA 133 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM-IQK 182 A I++ ++ + + G ++ GQM + E D +M + + Sbjct: 134 VASSIMA--------DLGPETVRHFAETFG--ELVTGQMRETVGCPEGEDPVDHYMTVIQ 183 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTG L+ A G++ A +++ L FG +LG +FQ+ DD++D D Sbjct: 184 EKTGVLIASAGFLGSMHGGAPVEQRDALFRFGRHLGQVFQIVDDIIDVWSD 234 >gi|17227592|ref|NP_484140.1| solanesyl diphosphate synthase [Nostoc sp. PCC 7120] gi|17135074|dbj|BAB77620.1| solanesyl diphosphate synthase [Nostoc sp. PCC 7120] Length = 323 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L++ L R+ E IH SL+HDD+ +D +RRG P Sbjct: 44 GGKRIRPAIVLLISRATMLDQGITPRHRRLAEITEMIHTASLVHDDV--VDESEVRRGVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH + AI+AG+ L + +++ + S++++ L QG L Sbjct: 102 TVHSLFGNRIAILAGDFLFAQSSWYLANLDNLQVVKLLSEVIMDLATGEIQQG------L 155 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D I KT +L+ + ++ +++ S E L +G +LGI FQ+ D Sbjct: 156 NRFDASISIETYIEKSYYKTASLVANSSKAAGLLSEVSPETAEHLYAYGRHLGIAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|300362327|ref|ZP_07058503.1| possible trans-hexaprenyltranstransferase [Lactobacillus gasseri JV-V03] gi|300353318|gb|EFJ69190.1| possible trans-hexaprenyltranstransferase [Lactobacillus gasseri JV-V03] Length = 338 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 13/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ +IE +H +LIHDD+ +D +R G+P++ +Y + A+ AG+ L + ++S Sbjct: 82 KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS- 138 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190 +N +S L + +Q +L G+ + + I E + K KTG L Sbjct: 139 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLNQIKGKTGVLFG 191 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AC GA + + + + FGE LG FQL DD+LD Sbjct: 192 LACFIGAYESGIKVTKALKAKQFGEYLGQAFQLRDDILD 230 >gi|6706999|gb|AAF25540.1|AF104994_10 geranyl transferase [Streptomyces coelicolor A3(2)] Length = 386 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 17/156 (10%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H ++L+HDD+ MD RR +PT + + AI+AG+ L A + ++ Sbjct: 130 ELVHNFTLLHDDV--MDRDATRRHRPTAWTVFGDADAILAGDALQALALRLFAADPHPAS 187 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI------QDEF-IDETQVFMIQKMKTGALMCFA 192 ++L + + GQ D DE +DET ++ + KTGAL+ A Sbjct: 188 AAAATRLADCVME------LCEGQHADTAMERPPPDEVTLDET--LVMAEAKTGALLGCA 239 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 C GA+ A A+ + E L FG G+ FQL DD++ Sbjct: 240 CAVGALYAGAATEDVEALDAFGREPGMAFQLIDDVI 275 >gi|302795999|ref|XP_002979762.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii] gi|300152522|gb|EFJ19164.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii] Length = 415 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 35/248 (14%) Query: 4 GLPSKLQENSKR--------IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKK 52 G+ S +Q +R I+ + DL L Q + N L+SA GGK+ Sbjct: 77 GVASYVQRRERREKLSLNEIIEPVSSDLDALNQNLQSIVGVQNPLLMSAAEQIFGAGGKR 136 Query: 53 IRS---FLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 +R FLV+ + N HL R+ E IH SLIHDD+ +D +RRGK T Sbjct: 137 MRPAIVFLVSRATMQLARLNTIHLQHRRLAEITEMIHTASLIHDDV--LDESDVRRGKET 194 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQM 164 VH Y A++AG+ + + +++ DN+ ++S G + + Sbjct: 195 VHQLYGTRIAVLAGDFMFAQSSWYLAN-----LDNLEVIKLISQVIKDFASGEIQQASSL 249 Query: 165 LDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D D ++D++ KT +L+ + S AI + A + +++ +G+ LG+ F Sbjct: 250 FDSDITLDNYLDKSY------YKTASLIAASTRSAAIFSGADPSVCDKMFDYGKYLGLAF 303 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 304 QIVDDILD 311 >gi|297624850|ref|YP_003706284.1| polyprenyl synthetase [Truepera radiovictrix DSM 17093] gi|297166030|gb|ADI15741.1| Polyprenyl synthetase [Truepera radiovictrix DSM 17093] Length = 315 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 16/220 (7%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRY--------ALLGGKKIRSFLVTECASLFNVNHLTAL 73 DL+ Q S + + + L S + + GGK++R L L A+ Sbjct: 3 DLIQQDLSDFEARLTEELYSPVEFIGAIGEDLVHAGGKRLRPSLAFLTGRLLGAEREAAM 62 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 RV A+E +H SL+HDDL +D+ RRG +Y V ++++G+ +L I++ Sbjct: 63 RVALAVELLHSASLLHDDL--IDDASTRRGVVAAFRRYGNVVSVMSGDFMLARVLGILAE 120 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + S+ + LQ QM ++ ++ I + KT L+ A Sbjct: 121 ADAPSFTRLMSETAARICEGEVLQF----QMASLETYSLEHYNT--IIEGKTAVLLAAAT 174 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 E A++A A+ + LR FG + G FQ+ DDLLD D Sbjct: 175 EGVALLAGAAPGARRALRAFGLHYGRAFQMRDDLLDLMSD 214 >gi|256831793|ref|YP_003160520.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603] gi|256685324|gb|ACV08217.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603] Length = 336 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 19/227 (8%) Query: 14 KRIDTILDDLLLQTASHMQ--TQHNDRLL--SAIRYALLGGKKIRSFLVTECASLFNVNH 69 +++ T L + L H++ T H D ++ ++ A GGK++R L A + + Sbjct: 13 EKLATALTEELQHVEEHLRSATSHADTVVNEASQHLANAGGKRLRPLLTLLAAHVGQGVN 72 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + +E H SL HDD+ MD+ +RRG P+ H + AI+ G+ L A Sbjct: 73 DDVRQAALVVELTHLASLYHDDV--MDSAPLRRGAPSAHEVWGNSVAILTGDLLFARASR 130 Query: 130 IISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 ++++ P+ ++ +L L H G+ G D + +I + KT Sbjct: 131 LVANLGPEAVHIQAVTFERLCLGQLHET--MGVRDGD--DPVEHYIG------VLADKTA 180 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +L+ + GA A A ++ L +GEN+G+ FQLADD++D D Sbjct: 181 SLLATSALLGAKFAGADHGIQQALARYGENVGVAFQLADDIIDLTSD 227 >gi|31747831|gb|AAO38414.1| Lfe206p1 [Leptospirillum ferrooxidans] Length = 150 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%) Query: 151 THNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 H GL GM+GGQMLD++ E I + + + KTGAL+ + GA++ ++E Sbjct: 1 AHGSGLSGMVGGQMLDMESEGRKISLDDLEFLHRHKTGALILSSVRIGALLGQGGESEMR 60 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 L +GE +G+ FQ+ADDLLD E D Sbjct: 61 SLDQYGEAVGVAFQIADDLLDVEGD 85 >gi|15673324|ref|NP_267498.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. lactis Il1403] gi|12724324|gb|AAK05440.1|AE006366_9 heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. lactis Il1403] gi|326406878|gb|ADZ63949.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. lactis CV56] Length = 319 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R + + +++ L + A++E +H +L+HDD+ +D+ RRG T+ Sbjct: 47 GGKMLRPAYLLLFSGFTDLSESERLALAASVEMMHTATLVHDDV--IDHADTRRGVATLS 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167 +Y A+ AG+ L F ++S +L + LT NIG ++ +LGG++ + Sbjct: 105 AKYGPEIAVYAGDYLFIAVFRLMSEHSLELSN---------LTKNIGSIERLLGGELGQL 155 Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 F + +T I+ + KTG L + +++ + K R G N+GI FQ+ Sbjct: 156 NHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNTLTK-RAYKIGMNIGISFQIM 214 Query: 225 DDLLD 229 DD LD Sbjct: 215 DDYLD 219 >gi|288917476|ref|ZP_06411842.1| Farnesyltranstransferase [Frankia sp. EUN1f] gi|288351179|gb|EFC85390.1| Farnesyltranstransferase [Frankia sp. EUN1f] Length = 860 Score = 68.2 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 10/211 (4%) Query: 27 TASHMQTQHNDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 T+ +T +D L AIR LGG K++R L A V + AA E H Sbjct: 585 TSQPAETSPHD--LDAIRAYALGGHAKRLRPVLTLMLAEGLRVPTRAIEPLLAASELFHT 642 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 SL+ DDLP+ DN RRG+PT H +DE + +A +++ F ++ Sbjct: 643 ASLLLDDLPAQDNATTRRGRPTAHRVFDEGSVQLAAVSMISSGFGQLARLHEHFPPVRVV 702 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQ------DEFIDETQVFMIQKMKTGALMCFACESGAI 198 +++ +G + + GQ LD+ D + T + + ++K+ + A + Sbjct: 703 EVVAYAGSTLGPERLCRGQNLDLHLARRADDRPVTGTDILEMYRLKSSTSIEAALVPLMM 762 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + E + + + GI+FQ+ DD+LD Sbjct: 763 LLGRPDREISLVERYARHAGIVFQIRDDVLD 793 >gi|254385932|ref|ZP_05001250.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1] gi|194344795|gb|EDX25761.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1] Length = 364 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 73 GGKAVRPALALLSAEAAGAAAEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 130 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T +L + + ++ GQ DI Sbjct: 131 KVHGPAQAILVGDALFALANEVLLELGTVEAGRAARRLTTAT------RKLIDGQAQDIS 184 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A ++L +G +LG+ FQ D Sbjct: 185 YEHRERVSVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVD 244 Query: 226 DLL 228 DLL Sbjct: 245 DLL 247 >gi|302543420|ref|ZP_07295762.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Streptomyces hygroscopicus ATCC 53653] gi|302461038|gb|EFL24131.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase) [Streptomyces himastatinicus ATCC 53653] Length = 335 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 14/187 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R LV A + + +E H +L HDD+ MD +RRG + + Sbjct: 53 GGKRFRPLLVLLAAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVSSAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A++ G+ L A +++ + +R Q + ++ GQ+L+ Sbjct: 111 ARWGNSVAVLTGDFLFARASHVLADLGPE---AVRVQAE-------AFERLVTGQILETA 160 Query: 169 -DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D + ++ + KTG+L+ + GA+M+ A ++ L +GE LG+ FQLADD Sbjct: 161 GPRGRDPIEHYLDVLAGKTGSLIAVSGRFGAMMSGADESIVNILTQYGERLGMAFQLADD 220 Query: 227 LLDCEED 233 +LD D Sbjct: 221 VLDIASD 227 >gi|224061363|ref|XP_002300442.1| predicted protein [Populus trichocarpa] gi|222847700|gb|EEE85247.1| predicted protein [Populus trichocarpa] Length = 420 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 30/241 (12%) Query: 8 KLQENSKR-------IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS-- 55 KL+++S+ + + DDL L Q + N L+SA GGK++R Sbjct: 87 KLKKDSRESISITNLFEVVADDLQTLNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPAL 146 Query: 56 -FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111 FLV+ A + + LT R+ IE IH SLIHDD+ +D +RRGK TVH Y Sbjct: 147 VFLVSRATAEVVGMKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHQLY 204 Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171 A++AG+ + + ++ N+ + ++ L + ++ G++ F Sbjct: 205 GTRVAVLAGDFMFAQSSWYLA--------NLENIEVIKLISQV-IKDFASGEIKQASSLF 255 Query: 172 ---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 ++ + + KT +L+ + + AI + + ++ +G+NLG+ FQ+ DD+L Sbjct: 256 DCDVELEEYLIKSYYKTASLIAASTKGAAIFSGVDSSVSMQMYDYGKNLGLSFQVVDDIL 315 Query: 229 D 229 D Sbjct: 316 D 316 >gi|51209963|ref|YP_063627.1| prenyl transferase [Gracilaria tenuistipitata var. liui] gi|50657717|gb|AAT79702.1| prenyl transferase [Gracilaria tenuistipitata var. liui] Length = 323 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 13/185 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK+IR ++ A L L L R+ E IH SL+HDD+ +D IRRG Sbjct: 44 GGKRIRPTIILLVA-LSTTQALHILPEHKRLAEITEIIHTASLVHDDV--IDECEIRRGV 100 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 TVH + A++AG+ L + +++ S+++ QG Sbjct: 101 NTVHNAFSTKVAVLAGDFLFAQSSWYLANLNNLEVVKTISKVITDFAEGEIRQG------ 154 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 L DE I KT +L+ +C++ AI++ + N + + +G++LG+ FQ+ Sbjct: 155 LTCFDETISMNNYIEKSFYKTASLIASSCKAAAILSDTTTNTQNQFYLYGKHLGLAFQIV 214 Query: 225 DDLLD 229 DD+LD Sbjct: 215 DDILD 219 >gi|325106523|ref|YP_004276177.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145] gi|324975371|gb|ADY54355.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145] Length = 323 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 14/229 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLF 65 KL E K I+ +D + + M++ + LL I + ++ GK+IR V A++ Sbjct: 3 KLDEIKKPIEKEIDAFEEKFKASMKS--SVPLLDRITHYIVKRKGKQIRPMFVFFSANIS 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +E +H +L+HDD+ +DN + RRG +V+ + A++ G+ LL Sbjct: 61 GGITESTYHAATFVELLHTATLVHDDV--VDNSFERRGFFSVNALWKNKIAVLVGDYLLA 118 Query: 126 YAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 ++S + K I S + L+ LQ M + +DI +E + + + K Sbjct: 119 KGL-LLSVDHQEFKQLKIVSDAVQQLSEGELLQ-MEKVRRMDISEEV-----YYEVIRKK 171 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T +L+ C +G+ A A+ +++ FGE +GI FQ+ DDL D D Sbjct: 172 TASLIASCCAAGSTSAGATDEIVKKMHDFGEKIGIAFQIKDDLFDFGTD 220 >gi|13383253|dbj|BAB39477.1| putative GGPP synthase 2 [Youngia japonica] Length = 127 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 3/127 (2%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGKPT H Y E A++AG+ L +AF+ I+S + L +IG Sbjct: 1 NDDFRRGKPTNHKVYGEDVAVLAGDSLFAFAFQHIASATVGASPARVLAAVGELAKSIGT 60 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI + + Q+ I KT AL+ A GAI+ S + E LR F Sbjct: 61 EGLVAGQVVDIASTGVKDVGLEQLEFIHIHKTAALLEAAVVLGAILGGGSDTQVEELRTF 120 Query: 214 GENLGII 220 +G++ Sbjct: 121 ARCIGLL 127 >gi|86131693|ref|ZP_01050290.1| polyprenyl synthetase [Dokdonia donghaensis MED134] gi|85817515|gb|EAQ38689.1| polyprenyl synthetase [Dokdonia donghaensis MED134] Length = 325 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 18/186 (9%) Query: 50 GKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R V A + N VN T R + IE IH SL+HDD+ +D+ +RR + Sbjct: 45 GKQMRPMFVFLTAKMMNSGEVNDRT-YRGASVIELIHTASLVHDDV--VDDSNMRRSFFS 101 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ + A++ G+ L + ++S DN + L+ ++ + ++ + G++L Sbjct: 102 LNALWKNKIAVLVGDFLFSKGL-LLSI------DNGDTDLLQIIS--VAVREISEGELLQ 152 Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+ I E + I + KT L+ C GA HA E +R+ FGE +G+ FQ+ Sbjct: 153 IEKARKLDITEELYYEIIRQKTATLIAACCAMGAQAVHAKGKEVKRMHKFGELIGMAFQI 212 Query: 224 ADDLLD 229 DDL D Sbjct: 213 KDDLFD 218 >gi|333029492|ref|ZP_08457553.1| Trans-hexaprenyltranstransferase [Bacteroides coprosuis DSM 18011] gi|332740089|gb|EGJ70571.1| Trans-hexaprenyltranstransferase [Bacteroides coprosuis DSM 18011] Length = 324 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 17/202 (8%) Query: 33 TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T N L+ AIR+ GK +R LV A LF L ++E +H SL+HDD Sbjct: 27 TSSNPLLMRAIRHIRKSNGKMMRPILVLLLAKLFGSIKTNTLYSAVSLELLHTASLVHDD 86 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D RRG+ +V+ ++ +++ G+ LL A ++ T+ D ++ + Sbjct: 87 V--VDESDERRGQLSVNALFNNKVSVLVGDFLL--ATSLVQVGLTRDCD------IIDVV 136 Query: 152 HNIGLQGMLGGQMLDIQD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 ++G Q + G++L + + EF ++ +I K KT AL + A+ A AS+ Sbjct: 137 AHLG-QNLADGEILQLSNVSNKEFSEDVYYSVIYK-KTAALFAACAKVAALSAGASKESV 194 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 FGE LGI FQ+ DD+ D Sbjct: 195 IEATKFGEYLGICFQIKDDIFD 216 >gi|219964684|gb|ACL68406.1| polyprenyl diphosphate synthase [Streptomyces peucetius ATCC 27952] Length = 314 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 23 GGKAVRPALALLSAEAAGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 80 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T ++ ++ + + T ++ GQ DI Sbjct: 81 KVHGPAQAILVGDALFALANEVLLEIGT-VEAGRATRRLTTATRK-----LIDGQAQDIS 134 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 135 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLESYGYHLGLAFQAVD 194 Query: 226 DLL 228 DLL Sbjct: 195 DLL 197 >gi|125623941|ref|YP_001032424.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. cremoris MG1363] gi|124492749|emb|CAL97704.1| similar to heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. cremoris MG1363] gi|300070715|gb|ADJ60115.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. cremoris NZ9000] Length = 319 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R + + +++ L + A++E +H +L+HDD+ +D+ RRG T+ Sbjct: 47 GGKMLRPAYLLLFSGFTDLSESERLALAASVEMMHTATLVHDDV--IDHADTRRGVATLS 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167 +Y A+ AG+ L F ++S +L + LT NIG ++ +LGG++ + Sbjct: 105 AKYGPEIAVYAGDYLFIAVFRLMSEHSLELSN---------LTKNIGSIERLLGGELGQL 155 Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 F + +T I+ + KTG L + +++ + K R G N+GI FQ+ Sbjct: 156 NHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNALTK-RAYKIGMNIGISFQIM 214 Query: 225 DDLLD 229 DD LD Sbjct: 215 DDYLD 219 >gi|268318920|ref|YP_003292576.1| hypothetical protein FI9785_426 [Lactobacillus johnsonii FI9785] gi|262397295|emb|CAX66309.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785] Length = 350 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 13/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ +IE +H +LIHDD+ +D +R G+P++ +Y + A+ AG+ L + ++S Sbjct: 94 KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS- 150 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190 +N +S L + +Q +L G+ + + I E + K KTG L Sbjct: 151 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFG 203 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AC GA + + + FGE LG FQL DD+LD Sbjct: 204 LACFIGAYESGLKVTRALKAKKFGEYLGQAFQLRDDILD 242 >gi|218196351|gb|EEC78778.1| hypothetical protein OsI_19015 [Oryza sativa Indica Group] Length = 414 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 23/229 (10%) Query: 13 SKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLF 65 S ++ + DDLL + N L+SA GGK++R FLV+ A L Sbjct: 93 SSLLEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELA 152 Query: 66 NVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + LT R+ IE IH SLIHDD+ +D+ +RRGK T+H Y A++AG+ + Sbjct: 153 GLLELTTEHQRLAEIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFM 210 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 + ++ N+ + ++ L + ++ G++ F I + Sbjct: 211 FAQSSWFLA--------NLENIEVIKLISQV-IKDFASGEIKQASTLFDCDITLDDYLLK 261 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + S AI + S E++ +G NLG+ FQ+ DD+LD Sbjct: 262 SYYKTASLIAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILD 310 >gi|115488130|ref|NP_001066552.1| Os12g0271700 [Oryza sativa Japonica Group] gi|113649059|dbj|BAF29571.1| Os12g0271700 [Oryza sativa Japonica Group] Length = 372 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 23/229 (10%) Query: 13 SKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLF 65 S ++ + DDLL + N L+SA GGK++R FLV+ A L Sbjct: 51 SSLLEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELA 110 Query: 66 NVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + LT R+ IE IH SLIHDD+ +D+ +RRGK T+H Y A++AG+ + Sbjct: 111 GLLELTTEHQRLAEIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFM 168 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 + ++ N+ + ++ L + ++ G++ F I + Sbjct: 169 FAQSSWFLA--------NLENIEVIKLISQV-IKDFASGEIKQASTLFDCDITLDDYLLK 219 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + S AI + S E++ +G NLG+ FQ+ DD+LD Sbjct: 220 SYYKTASLIAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILD 268 >gi|195999464|ref|XP_002109600.1| hypothetical protein TRIADDRAFT_20625 [Trichoplax adhaerens] gi|190587724|gb|EDV27766.1| hypothetical protein TRIADDRAFT_20625 [Trichoplax adhaerens] Length = 302 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 26/194 (13%) Query: 50 GKKIRSFLVTECASLFNV-------NHLTALR--VGAAIECIHCYSLIHDDLPSMDNGYI 100 GK+IR LV A N + LT + +G E IH SLIHDD+ +D +I Sbjct: 17 GKQIRPMLVYLTARACNYHTDPKKESKLTEGQSAIGVISEMIHTASLIHDDV--IDAAHI 74 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGKPT++ + + AI+ G+ +L+ A +S + + + SQ++ L +Q L Sbjct: 75 RRGKPTINSVWGQKKAILTGDYILSRATVALSKLRNERVVIVLSQVLDDLVQGEFMQ--L 132 Query: 161 GGQMLDIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHA-SQNEKERLRCFGE 215 G + D + F I+K KT +LM +C++ AI+A +Q + FG Sbjct: 133 GSKE--------DRGERFNHYIKKTFRKTASLMACSCKAVAILADPLNQFLHDVAFNFGM 184 Query: 216 NLGIIFQLADDLLD 229 + GI FQL DDLLD Sbjct: 185 HFGISFQLIDDLLD 198 >gi|254526364|ref|ZP_05138416.1| solanesyl diphosphate synthase [Prochlorococcus marinus str. MIT 9202] gi|221537788|gb|EEE40241.1| solanesyl diphosphate synthase [Prochlorococcus marinus str. MIT 9202] Length = 323 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 19/221 (8%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-LTAL- 73 ++ LDDL+L+ + + H +A GGK++R +V + + LT+ Sbjct: 11 VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFCLTSKH 70 Query: 74 -RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L A ++ Sbjct: 71 KRLAEITEMIHTASLVHDDV--VDEAATRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLA 128 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGAL 188 + DN+ +LS + + G++ + F D Q F I K KT +L Sbjct: 129 N-----LDNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFSKYINKSYCKTASL 178 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + +C++ +++ + L FG+N+G+ FQ+ DD+LD Sbjct: 179 IANSCKAAGVLSEINDENLTSLYEFGKNIGLAFQVVDDILD 219 >gi|254382424|ref|ZP_04997783.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1] gi|194341328|gb|EDX22294.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1] Length = 336 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 17/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R LV AS F + + A + E H +L HDD+ MD +RRG + Sbjct: 53 GGKRFRPLLVM-LASRFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEADVRRGVASA 109 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ A++ G+ L A I++ + +R Q + ++ GQ+L+ Sbjct: 110 NARWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILET 159 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D + ++ + KTG+L+ + GA+M+ A ++ + L +GE LG FQLA Sbjct: 160 AGPRDGRDPVEHYLDVIAGKTGSLIAVSGRFGALMSGADESVVDILTQYGERLGTAFQLA 219 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 220 DDVLDIASD 228 >gi|282852728|ref|ZP_06262070.1| polyprenyl synthetase [Lactobacillus gasseri 224-1] gi|282556470|gb|EFB62090.1| polyprenyl synthetase [Lactobacillus gasseri 224-1] Length = 324 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 13/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ +IE +H +LIHDD+ +D +R G+P++ +Y + A+ AG+ L+ + ++S Sbjct: 82 KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLVALSLTLLS- 138 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190 +N +S L + +Q +L G+ + + I E + K KTG L Sbjct: 139 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFG 191 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AC GA + + + + FGE LG FQL DD+LD Sbjct: 192 LACFIGAYESGTKVTKALKAKKFGEYLGQAFQLRDDILD 230 >gi|329666771|gb|AEB92719.1| putative polyprenyl synthetase [Lactobacillus johnsonii DPC 6026] Length = 350 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 13/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ +IE +H +LIHDD+ +D +R G+P++ +Y + A+ AG+ L + ++S Sbjct: 94 KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS- 150 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190 +N +S L + +Q +L G+ + + I E + K KTG L Sbjct: 151 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFG 203 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AC GA + + + FGE LG FQL DD+LD Sbjct: 204 LACFIGAYESGLKVTRALKAKKFGEYLGQAFQLRDDILD 242 >gi|326383002|ref|ZP_08204691.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL B-59395] gi|326198138|gb|EGD55323.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL B-59395] Length = 339 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 41/242 (16%) Query: 2 NGGLPSKLQENSKRIDTIL-------DDLLLQTASHMQTQHNDRL--LSAIRYALLGGKK 52 G ++QE+ +R++ +L DD+L++ A+H+ R + AI + G K Sbjct: 12 TGEFAGQVQESLQRVEDLLISELSSGDDILVEAATHLAKAGGKRFRPMFAILSSHFGAKP 71 Query: 53 IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112 ++T IE H +L HDD+ MD +RRG P+ + ++ Sbjct: 72 GADEVITSAT---------------VIEMTHLATLYHDDV--MDEAALRRGAPSANARWS 114 Query: 113 EVTAIIAGNGLLTYAFEIISS--PKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 AI+AG+ L A ++S+ P+ + D + + +G+ Sbjct: 115 NSIAILAGDFLFARASHLVSTLGPEAVRIIADTFAELVTGQMRETVGVSA---------G 165 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+ I+ + KTG+L+ A GA A A + + L G+ +G FQ++DD++ Sbjct: 166 DDPIE--HYLKVVWEKTGSLIATAGRFGAYTAGADETTVDTLARLGDVVGTAFQVSDDII 223 Query: 229 DC 230 D Sbjct: 224 DI 225 >gi|262392448|ref|YP_003284302.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] gi|262336042|gb|ACY49837.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] Length = 323 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L +++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSNAVNVIAEGEVQ-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A ++ + ++ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|315634742|ref|ZP_07890026.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393] gi|315476690|gb|EFU67438.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393] Length = 329 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A A+ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLITVLAARALGFEGQKAITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ QL+ ++M T N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QLESLKILRIMADAT-NVLAEGEVQ-QLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A A +++ L+ +G LG FQL DD+L Sbjct: 161 DPQTSEENYMRVIYSKTARLFEVAAQAAAIIADADDEQEKALQNYGRYLGTAFQLVDDVL 220 Query: 229 D 229 D Sbjct: 221 D 221 >gi|329928274|ref|ZP_08282174.1| putative heptaprenyl pyrophosphate synthase component 2 [Paenibacillus sp. HGF5] gi|328937953|gb|EGG34355.1| putative heptaprenyl pyrophosphate synthase component 2 [Paenibacillus sp. HGF5] Length = 334 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 13/198 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R +V + H A ++ +E +H SL+HDD+ +D +RRG PT+ Sbjct: 45 GGKRLRPLMVVLGSRFGESGHEPAVMKTAVLLEYLHMASLVHDDI--IDQSDMRRGMPTL 102 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-----G 162 H D TA+ GN ++ A E + D + + + L G Sbjct: 103 HETTDVQTAVHIGNYMIARAIEWAAGHPGGDPDGNSEDISEDEAYRLAELAALVTELCMG 162 Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + +Q F + Q + KT LM ++GA AHA ERL FGE+LG+ Sbjct: 163 EYDQLQHRFDFGLTMEQYLEKTRCKTALLMAHCLKAGAEAAHADAGTAERLFQFGESLGM 222 Query: 220 IFQLADDLLDCEEDLPKK 237 FQ+ DDLLD E PK+ Sbjct: 223 AFQIRDDLLDFTE--PKE 238 >gi|257899830|ref|ZP_05679483.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com15] gi|257837742|gb|EEV62816.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com15] Length = 328 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 19/164 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+ + A+IE +H +LIHDD+ +D +RR +P + Q+ V ++ AG+ L F+++ Sbjct: 70 AIALAASIEMLHTATLIHDDI--VDEADLRRSQPNIRSQFGNVVSVYAGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185 S T LK N RS ++ +L G++ + D + E V + KT Sbjct: 128 SDYSTSLKSLQLNSRS-----------MEKVLNGELGQMDDRYNYELSVKEYLENISGKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L +C GA + S+ ++ G ++G+ FQ+ DD+LD Sbjct: 177 AELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILD 220 >gi|148652697|ref|YP_001279790.1| polyprenyl synthetase [Psychrobacter sp. PRwf-1] gi|148571781|gb|ABQ93840.1| Polyprenyl synthetase [Psychrobacter sp. PRwf-1] Length = 309 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 22/192 (11%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + C+ L + A+ + A E +H +L+HDD+ +D +RRG+PT Sbjct: 27 GGKRMRPLITLLCSRLCKDEQSKDAMHLAAITEMLHTATLVHDDV--IDESGMRRGRPTA 84 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + +D TA++ G+ L+ AF ++ +S +L L + G + G++L + Sbjct: 85 NATWDNPTAVLVGDYLIARAFNLLVG--------FQSLPLLQLFSD-GTCDIAEGEVLQL 135 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC---FGENLGIIF 221 Q + ET I KT L A AI+ Q++ E ++ FG++ G F Sbjct: 136 QHQHNPEATETDYMNIIDGKTSRLFMMATAGVAIL----QDKPEFMQPFSDFGQHFGNAF 191 Query: 222 QLADDLLDCEED 233 Q+ DD+LD D Sbjct: 192 QIIDDVLDYSGD 203 >gi|78484685|ref|YP_390610.1| trans-hexaprenyltranstransferase [Thiomicrospira crunogena XCL-2] gi|78362971|gb|ABB40936.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2] Length = 321 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 9/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + L + A IE IH +L+HDD+ +D RRG T + Sbjct: 43 GGKRLRPLLVLLSAHACDYKGKDHLTLAAVIEFIHTSTLLHDDV--VDESETRRGNQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ P +R ++S T N+ +G + Q+L+ Sbjct: 101 EVWGNAASVLVGDFLYSRSFEMMVEPGI-----MRVMEVMSETTNVIAEGEV-LQLLNCH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + KT L A G I+ + E +G +LG FQL DD L Sbjct: 155 DADTTSQRYMEVIHRKTAKLFEAATLLGPILGKKPELES-AFSSYGRHLGAAFQLIDDAL 213 Query: 229 DCEED 233 D D Sbjct: 214 DYTAD 218 >gi|76809882|ref|YP_334895.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b] gi|167721317|ref|ZP_02404553.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei DM98] gi|167740286|ref|ZP_02413060.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 14] gi|167817505|ref|ZP_02449185.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 91] gi|167825907|ref|ZP_02457378.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 9] gi|167847393|ref|ZP_02472901.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei B7210] gi|167895981|ref|ZP_02483383.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 7894] gi|167904366|ref|ZP_02491571.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei NCTC 13177] gi|167912626|ref|ZP_02499717.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 112] gi|167920573|ref|ZP_02507664.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei BCC215] gi|254258017|ref|ZP_04949071.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a] gi|254299344|ref|ZP_04966794.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e] gi|76579335|gb|ABA48810.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b] gi|157809083|gb|EDO86253.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e] gi|254216706|gb|EET06090.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a] Length = 330 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A N + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 109 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A GA++A A + +G +G FQ+ DD L Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 222 Query: 229 D 229 D Sbjct: 223 D 223 >gi|158288633|ref|XP_565746.3| AGAP000591-PA [Anopheles gambiae str. PEST] gi|157018662|gb|EAL41155.3| AGAP000591-PA [Anopheles gambiae str. PEST] Length = 346 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 12/184 (6%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 A+L K + + E + + N A+ E IH SL+HDD+ +D + RRGKP Sbjct: 71 AILMAKALNYHMHNENSDVMNAQRQIAM----ISEMIHTASLVHDDV--IDQSFARRGKP 124 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 +V++ ++ AG+ +L A +++ K +I SQ++ L +Q LG + Sbjct: 125 SVNVLWNHKKVTQAGDYILAVASMLLARLKHDEVTHILSQVLTDLVQGEFMQ--LGSK-- 180 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + ++E F KT +L+ + ++ A+++ A + E +G NLG+ FQ D Sbjct: 181 ETENERF--AHYFTKTYRKTASLIANSLKAVAVLSGADEQMAELSFQYGRNLGLAFQFVD 238 Query: 226 DLLD 229 DLLD Sbjct: 239 DLLD 242 >gi|90420152|ref|ZP_01228060.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans SI85-9A1] gi|90335486|gb|EAS49236.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans SI85-9A1] Length = 337 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + +++ A++E +H +L+HDD+ +D +RRGK T Sbjct: 56 GGKRLRPMLTIASALAHDYRGDAHVKLAASVEFMHTATLLHDDV--VDESDLRRGKKTAR 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ LL AF KT ++ + L +LS ++ +G + Q+ Sbjct: 114 TIWGNQASVLVGDFLLGQAF------KTMVEVGSLTALDILSTASSVIAEGEVW-QLSAA 166 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + E + KT AL A E G ++A A + E+ +R +G +LG+ FQL DD+ Sbjct: 167 KHMTTSEADYLAVIDAKTAALFAAAAEVGPVIAGAGEAERTAMRDYGRSLGLAFQLVDDV 226 Query: 228 LD 229 LD Sbjct: 227 LD 228 >gi|257076044|ref|ZP_05570405.1| farnesyl pyrophosphate synthetase/ geranyltransferase/farnesyltransferase/hexaprenyl [Ferroplasma acidarmanus fer1] Length = 330 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 28/211 (13%) Query: 36 NDRLLSAIR-----------YAL-LGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECI 82 N RLL AI+ Y + GGK+ R L + N + + L + + E I Sbjct: 19 NSRLLQAIKTDQPYLFEMSKYTIDAGGKRFRPLLTILSYEISCNEPYDSILDLASGYELI 78 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H SLIHDD+ +D RRG+ T+ +Y AI+ G+ L A+E+ S Sbjct: 79 HTASLIHDDI--IDKSKYRRGRETLASRYGIDNAIVVGDYLFAKAYELGS---------- 126 Query: 143 RSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 R ++S G + GQ+ L+I + +D I KT E I Sbjct: 127 RYGKVVSKVMADGSSHLAEGQIIEALNIGNLSLDIETYNKIIMNKTAYFFSACAEGATIA 186 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A A N +++L F N+G+ FQ+ DD+LD Sbjct: 187 AMAPDNVRDKLSKFAYNMGMAFQITDDILDI 217 >gi|91216014|ref|ZP_01252983.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755] gi|91185991|gb|EAS72365.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755] Length = 325 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALLG--GKKIRS---FLVTECASLFNVNHLTALRVGAA 78 L + H+ LL+ I + ++ GK++R FLV + S VN T R + Sbjct: 17 LFEKKFHLFMSSRVALLNKITHFIVNRKGKQMRPMFVFLVAKMVSKGEVNDRT-YRGASV 75 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE IH +L+HDD+ +D+ RRG +++ + A++ G+ LL+ ++S Sbjct: 76 IELIHTATLVHDDI--VDDSNQRRGFFSINALWKNKIAVLVGDFLLSKGL-LLSI----- 127 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACES 195 DN L+ ++ + ++ M G++L I+ I E + I + KT L+ C Sbjct: 128 -DNDDFDLLKIIS--VAVREMSEGELLQIEKARRLDITEDIYYEIIRQKTATLIAACCSL 184 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA + E +R FGE +G+ FQ+ DDL D Sbjct: 185 GAAAVRPGSKDVEDMRKFGELIGMAFQIKDDLFD 218 >gi|48478271|ref|YP_023977.1| farnesyl pyrophosphate synthetase/ geranyltransferase/farnesyltransferase/hexaprenyl diphosphate synthase [Picrophilus torridus DSM 9790] gi|48430919|gb|AAT43784.1| farnesyl pyrophosphate synthetase/ geranyltransferase/farnesyltransferase/hexaprenyl diphosphate synthase [Picrophilus torridus DSM 9790] Length = 328 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 39/224 (17%) Query: 36 NDRLLSAI-----------RYAL-LGGKKIRSFLVT---ECASLFNVNHLTALRVGAAIE 80 N RLL +I RY + GGK+ R L E AS ++ L + A E Sbjct: 19 NQRLLDSIQTDEKYLYDMARYTIEAGGKRFRPLLTILSFEIAS--GESYEKILDLAAGYE 76 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH SLIHDD+ +D+ +RRG+ T+ + AI+ G+ L A+E+ S ++ Sbjct: 77 LIHTASLIHDDI--IDHSDMRRGRYTLSYKEGINNAIVVGDYLFAKAYELGSRYGKEV-- 132 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFIDETQVFMIQKMKTGALMCFACESG 196 S++M + N+ GQ+L+ ++ +ET + +I+ KT AC G Sbjct: 133 ---SKIMADASSNLA-----EGQILEAENIGNLNMNEETYLKIIEN-KTARFFA-ACALG 182 Query: 197 AIMAHASQNE-KERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A A + E RL F N+G+ FQ+ DD+LD E+D+ K Sbjct: 183 ATKAAGADFEISNRLSNFAYNMGMAFQITDDILDIIGNEKDMGK 226 >gi|326390072|ref|ZP_08211634.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325993937|gb|EGD52367.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 322 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 20/228 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASL 64 K N+ I LD+++ ++ + + LL IR + GK +R V Sbjct: 3 KFWNNNLEIKNELDEVIKIMEKRIKNSNRSIRNILLDMIRNS---GKMLRPAFVILSGKF 59 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + L + AA+E +H +L+HDD+ +DN IRR KPT+ +Y + A+ G+ L Sbjct: 60 GEYDRKRILPLAAAVEMLHMATLVHDDI--IDNALIRRSKPTIQAEYGKNYAVFIGDFLF 117 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM 183 + F ++S DNI + + ++ + + G++ + + ID T ++++ Sbjct: 118 SECFLLLS-------DNITIENLKKVSKVVS--RICKGEIGQFESRYNIDITINDYLKRI 168 Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT AL + GA ++ + + L G N+G+ FQ+ DD+LD Sbjct: 169 AAKTAALFALSFYVGAYESNCGEKLAKILGSIGYNIGMAFQIIDDVLD 216 >gi|289549205|ref|YP_003474193.1| Geranyltranstransferase [Thermocrinis albus DSM 14484] gi|289182822|gb|ADC90066.1| Geranyltranstransferase [Thermocrinis albus DSM 14484] Length = 300 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 15/183 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ E A + + + + IE IH SL+HDD+ +D +RRG+P+ + Sbjct: 33 GGKRVRPILMLETARMLGGDTERLIPLAVGIEYIHMASLLHDDV--VDGADVRRGRPSAN 90 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + ++ G+ + A + S L N++S ++S + M GQ+L++ Sbjct: 91 RVFGNPIVVLTGDYMYARALWLYS-----LYGNMKSIEIVSRA----VMQMAEGQVLELL 141 Query: 169 --DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + IDE I KTGAL + GA+M+ E+ G +G FQ+ DD Sbjct: 142 HIGKIIDEETYLRIVDGKTGALFGASMGVGALMSGYPGFEE--FYRMGVKVGRAFQMVDD 199 Query: 227 LLD 229 LD Sbjct: 200 ALD 202 >gi|281204751|gb|EFA78946.1| trans-prenyltransferase [Polysphondylium pallidum PN500] Length = 902 Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 32/232 (13%) Query: 19 ILDDLLLQTASHM----QTQHNDRLLSAIRYAL--LGGKKIRS---FLVTECASLFNVNH 69 I DLLL T S + + Q ND LL+ I L L GKK R FL+++ Sbjct: 39 IEKDLLLLTNSILNELSKNQENDSLLNKISCLLFNLKGKKTRPTVIFLLSKILENEKTKS 98 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + L++ E H SLIHDD+ +D RR + TV+ Y AI G+ +L+ + Sbjct: 99 NSFLKLAMVAEMFHTASLIHDDV--IDGSDTRRDEKTVNTLYSNRMAITGGDFILSKSMV 156 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 I+ S + N+R +S N+ L ++ G++L +Q + + +KT ++ Sbjct: 157 ILGSIR-----NVRVAKSMS---NV-LGDLVDGELLQLQGNGLSFEKYLQKSYLKTSSMF 207 Query: 190 CFACESGAIM----------AHASQNEKERLRCF--GENLGIIFQLADDLLD 229 C+S A++ + +EK CF G +GI FQ+ DDLLD Sbjct: 208 SNCCKSVALLGIHDDDDDIGSSIKIDEKTVELCFQFGTYIGIAFQIIDDLLD 259 >gi|227888787|ref|ZP_04006592.1| possible trans-hexaprenyltranstransferase [Lactobacillus johnsonii ATCC 33200] gi|227850624|gb|EEJ60710.1| possible trans-hexaprenyltranstransferase [Lactobacillus johnsonii ATCC 33200] Length = 350 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 13/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ +IE +H +LIHDD+ +D +R G+P++ +Y + A+ AG+ L + ++S Sbjct: 94 KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS- 150 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190 +N +S L + +Q +L G+ + + I E + K KTG L Sbjct: 151 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFG 203 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AC GA + + + FGE LG FQL DD+LD Sbjct: 204 LACFIGAYESGLKVTRALKAKKFGEYLGQAFQLRDDILD 242 >gi|134098296|ref|YP_001103957.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] gi|133910919|emb|CAM01032.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] Length = 358 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 37/214 (17%) Query: 43 IRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 +R+ L GGK+IR + LR +++E + +L+HDDL +D+ Sbjct: 39 VRFVLGGGKRIRPTFAWWGWRAAGGAADGPQAQAMLRAASSLELLQACALVHDDL--IDD 96 Query: 98 GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISS---PKTQL 138 RRG PTVH Q+ AI+ G+ L +A +++ + P + Sbjct: 97 SDTRRGNPTVHQAFAALHRHQRWNGEDRQFGMAAAILLGDLALAWADDMLHASGLPPEAM 156 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQ--VFMIQKMKTGALMC-FACE 194 +R + +L GQ LD+ DET I ++K+ + E Sbjct: 157 ARGLRPWRAMRTE-------VLAGQYLDLLGPVRGDETPQAALRIDELKSASYTVQRPLE 209 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A + E LR FG ++G+ FQL DDLL Sbjct: 210 LGAELAGADETALEALRRFGSDIGVAFQLRDDLL 243 >gi|53720615|ref|YP_109601.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243] gi|126451455|ref|YP_001067764.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1106a] gi|237813898|ref|YP_002898349.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346] gi|242316724|ref|ZP_04815740.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b] gi|254180568|ref|ZP_04887166.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655] gi|254190992|ref|ZP_04897498.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur 52237] gi|254199098|ref|ZP_04905513.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13] gi|52211029|emb|CAH37017.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243] gi|126225097|gb|ABN88637.1| polyprenyl synthetase [Burkholderia pseudomallei 1106a] gi|157938666|gb|EDO94336.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur 52237] gi|169656928|gb|EDS88325.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13] gi|184211107|gb|EDU08150.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655] gi|237505493|gb|ACQ97811.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346] gi|242139963|gb|EES26365.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b] Length = 332 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A N + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 111 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A GA++A A + +G +G FQ+ DD L Sbjct: 165 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|209522097|ref|ZP_03270748.1| Polyprenyl synthetase [Burkholderia sp. H160] gi|209497469|gb|EDZ97673.1| Polyprenyl synthetase [Burkholderia sp. H160] Length = 330 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 80/155 (51%), Gaps = 8/155 (5%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F+++ Sbjct: 77 LAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGV 134 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 +R +L+ NI +G + Q+L++ D +DE + + + KT L A + Sbjct: 135 G-----KMRVMEILAEATNIISEGEVL-QLLNMHDADVDEARYMQVIRYKTAKLFEAAAQ 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA++A A + +G +G FQ+ DD LD Sbjct: 189 LGAVLAGADTKTEAAAAEYGRRIGTAFQIMDDWLD 223 >gi|48475134|gb|AAT44203.1| putative polyprenyl diphosphate synthase [Oryza sativa Japonica Group] gi|57863832|gb|AAS16899.2| putative polyprenyl diphosphate synthase [Oryza sativa Japonica Group] gi|215694846|dbj|BAG90037.1| unnamed protein product [Oryza sativa Japonica Group] gi|222632699|gb|EEE64831.1| hypothetical protein OsJ_19688 [Oryza sativa Japonica Group] Length = 403 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L + LT R+ IE IH SLIHDD+ +D+ +RR Sbjct: 121 GGKRLRPALVFLVSRATAELAGLLELTTEHQRLAEIIEMIHTASLIHDDV--IDDSGMRR 178 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK T+H Y A++AG+ + + ++ N+ + ++ L + ++ G Sbjct: 179 GKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------NLENIEVIKLISQV-IKDFASG 229 Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F + + KT +L+ + S AI + S E++ +G NLG+ Sbjct: 230 EIKQASTLFDCDVTLDDYLLKSYYKTASLLASSTRSAAIFSGVSTTICEQMYEYGRNLGL 289 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 290 SFQVVDDILD 299 >gi|307264970|ref|ZP_07546531.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919955|gb|EFN50168.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter wiegelii Rt8.B1] Length = 322 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 20/228 (8%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASL 64 K N+ I LD+++ ++ + + LL IR + GK +R V Sbjct: 3 KFWNNNLEIKNELDEVIKIMEKRVKNSNRSIRNILLDMIRNS---GKMLRPAFVILSGKF 59 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + L + AA+E +H +L+HDD+ +DN IRR KPT+ +Y + A+ G+ L Sbjct: 60 GEYDRRRILPLAAAVEMLHMATLVHDDI--IDNALIRRSKPTIQAEYGKNYAVFIGDFLF 117 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM 183 + F ++S DNI + + ++ + + G++ + + ID T ++++ Sbjct: 118 SECFLLLS-------DNITIENLKKVSKVVS--RICKGEIGQFESRYNIDITINDYLKRI 168 Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT AL + GA ++ + + L G N+G+ FQ+ DD+LD Sbjct: 169 AAKTAALFALSFYVGAYESNCGEKLAKILGSIGYNIGMAFQIIDDVLD 216 >gi|86153438|ref|ZP_01071642.1| bifunctional short chain isoprenyl diphosphate synthase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843164|gb|EAQ60375.1| bifunctional short chain isoprenyl diphosphate synthase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 297 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +D+L+ Q + + +LS ++ GKK+RS L+ A + A ++ AAI Sbjct: 4 IDELIKQFLQELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D +RRG +V+ ++ A++ G+ L + AF +S + Sbjct: 56 ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYKLSKMDARFA 113 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197 S+ + ++ +G M +D+ ++F I++ + KT L+ + GA Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+A + + +G+NLG+ FQ+ DD+LD + D Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197 >gi|269964673|ref|ZP_06178911.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B] gi|269830572|gb|EEZ84793.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B] Length = 323 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L +++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSNAVNVIAEGEVQ-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A ++ + ++ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|268565995|ref|XP_002639605.1| C. briggsae CBR-COQ-1 protein [Caenorhabditis briggsae] gi|187029454|emb|CAP31310.1| CBR-COQ-1 protein [Caenorhabditis briggsae AF16] Length = 392 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 10/159 (6%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++G E IH SL+HDD+ +D RRG +V+ + +++ G+ +L A +I+ S Sbjct: 136 KIGMIAEMIHTASLVHDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCS 193 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCF 191 K N+ + +M S+ ++ L G + + + V I+K KT +L Sbjct: 194 IG---KPNVIA-VMASIIEDLVL-GEFMQMSVTPSEATPSQRMVAYIEKTHRKTASLFAS 248 Query: 192 ACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLD 229 +C S AI+A +S N + +G NLGI FQLADDLLD Sbjct: 249 SCRSTAILADSSNSNLHQTAYEYGRNLGIAFQLADDLLD 287 >gi|226196886|ref|ZP_03792465.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pakistan 9] gi|225931146|gb|EEH27154.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pakistan 9] Length = 278 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A N + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 30 GGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 88 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A GA++A A + +G +G FQ+ DD L Sbjct: 142 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 201 Query: 229 D 229 D Sbjct: 202 D 202 >gi|126656937|ref|ZP_01728115.1| Polyprenyl synthetase [Cyanothece sp. CCY0110] gi|126621775|gb|EAZ92484.1| Polyprenyl synthetase [Cyanothece sp. CCY0110] Length = 323 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 13/185 (7%) Query: 49 GGKKIRS--FLVTECASLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK+IR L+ A++ + LT R+ E IH SL+HDD+ +D +RR Sbjct: 44 GGKRIRPAIVLLVSRATMLD-RELTPRHRRLAEITEMIHTASLVHDDV--VDEAALRRNV 100 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 PTV+ +D A++AG+ L + +++ + S+++ QG+ Sbjct: 101 PTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEIFQGINRFDT 160 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D ++D++ KT +L+ + +S AI++ +S + L +G LG+ FQ+ Sbjct: 161 TLTLDAYLDKSY------YKTASLIANSAKSAAILSDSSTEVIDSLYAYGRYLGLAFQIV 214 Query: 225 DDLLD 229 DD+LD Sbjct: 215 DDILD 219 >gi|302536189|ref|ZP_07288531.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. C] gi|302445084|gb|EFL16900.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. C] Length = 336 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 17/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R LV AS F + + A + E H +L HDD+ MD +RRG + Sbjct: 53 GGKRFRPLLVM-LASRFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEADVRRGVESA 109 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ A++ G+ L A I++ + +R Q + ++ GQ+L+ Sbjct: 110 NTRWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILET 159 Query: 168 ---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D + KTG+L+ + GA+M+ A ++ + L +GE LG FQLA Sbjct: 160 AGPRDGRDPVAHYLDVIAGKTGSLIAVSGRFGALMSGADESVVDILTQYGERLGTAFQLA 219 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 220 DDVLDIASD 228 >gi|260799431|ref|XP_002594699.1| hypothetical protein BRAFLDRAFT_240460 [Branchiostoma floridae] gi|229279935|gb|EEN50710.1| hypothetical protein BRAFLDRAFT_240460 [Branchiostoma floridae] Length = 328 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 27/194 (13%) Query: 50 GKKIRSFLVTECASLFNVNHLTA---------LRVGAAIECIHCYSLIHDDLPSMDNGYI 100 GK R +V + N +H A R+ E IH SL+HDD+ +D Sbjct: 44 GKAFRPMVVLLMSRACNFHHGAAENSLALPSQRRISMIAEMIHTASLVHDDV--IDEADT 101 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRGK V + + AI+ G+ +LT +SS N ++LS ++ ++ Sbjct: 102 RRGKACVSYLHGQRKAILTGDYILT-----VSSMALAAIGNKDVVILLSQV----IEDLV 152 Query: 161 GGQMLDI---QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGE 215 G+ + + +DE DE ++K KT +L+ +C + A+++ +S++ +E +G+ Sbjct: 153 RGEFMQLGTKEDE--DERFAHYLKKTFKKTASLLAHSCRAVAVLSGSSKDVQEVAYQYGK 210 Query: 216 NLGIIFQLADDLLD 229 NLGI FQL DD+LD Sbjct: 211 NLGIAFQLVDDMLD 224 >gi|158317822|ref|YP_001510330.1| polyprenyl synthetase [Frankia sp. EAN1pec] gi|158113227|gb|ABW15424.1| Polyprenyl synthetase [Frankia sp. EAN1pec] Length = 338 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 17/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R +V A + + + AIE H +L HDD+ MD +RRG + + Sbjct: 54 GGKRFRPMVVLLAAQFADPDAAGVVPAAVAIELTHLSTLYHDDV--MDEAPLRRGAASAN 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQM 164 ++ AI+ G+ L A EI + P+ L I + + +G+ G Sbjct: 112 ARWTNTVAILTGDFLFARASEITADLGPEATRILARTIATLCEGQIRETVGV-----GPG 166 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D + ++ + KT +L+ + GA++A A + L FGE G+ FQL+ Sbjct: 167 QDPIEHYL------RVITEKTASLIATSARLGAMLAGADPVTTDVLAAFGERFGVAFQLS 220 Query: 225 DDLLDC 230 DDL+D Sbjct: 221 DDLIDV 226 >gi|307325950|ref|ZP_07605149.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306888442|gb|EFN19429.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 359 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 30/247 (12%) Query: 6 PSKLQENSKR--IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL-VTECA 62 P +L ++ R +D +L+D L A H L ++ L GGK+IR L VT Sbjct: 8 PGRLDADTVRESVDVVLEDFLTAKARTTPQHHLPYLSGLLKDFLSGGKRIRPLLCVTGWQ 67 Query: 63 SLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------IQY 111 ++ A+ RV A +E H ++LIHDD+ MD+ RRG+PT+H + Sbjct: 68 AVGGGEDTDAVFRVAACLEMFHAFALIHDDV--MDDSDTRRGRPTIHRTLAALCAADRRP 125 Query: 112 DEVT------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 D++ A++ G+ LT++ E++ S + +L L + + ML GQ L Sbjct: 126 DQIERFGVSGAVLLGDLALTWSDELLHSAGLT---PAQFDAVLPLLSEMRTEVML-GQYL 181 Query: 166 DIQ--DEFIDETQVFM-IQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIF 221 D+Q E D+ + + + + KT GA +A A+ E + LG F Sbjct: 182 DLQATGELTDDVEATLTVNRYKTAKYTIERPLHVGAAIAGAAPEAMEAFTAYALPLGEAF 241 Query: 222 QLADDLL 228 QL DDLL Sbjct: 242 QLRDDLL 248 >gi|134280083|ref|ZP_01766794.1| polyprenyl synthetase [Burkholderia pseudomallei 305] gi|134248090|gb|EBA48173.1| polyprenyl synthetase [Burkholderia pseudomallei 305] Length = 309 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A N + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 30 GGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 88 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A GA++A A + +G +G FQ+ DD L Sbjct: 142 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 201 Query: 229 D 229 D Sbjct: 202 D 202 >gi|167842012|ref|ZP_02468696.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis MSMB43] Length = 330 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A N + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 109 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A GA++A A + +G +G FQ+ DD L Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 222 Query: 229 D 229 D Sbjct: 223 D 223 >gi|291004284|ref|ZP_06562257.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] Length = 370 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 37/214 (17%) Query: 43 IRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 +R+ L GGK+IR + LR +++E + +L+HDDL +D+ Sbjct: 51 VRFVLGGGKRIRPTFAWWGWRAAGGAADGPQAQAMLRAASSLELLQACALVHDDL--IDD 108 Query: 98 GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISS---PKTQL 138 RRG PTVH Q+ AI+ G+ L +A +++ + P + Sbjct: 109 SDTRRGNPTVHQAFAALHRHQRWNGEDRQFGMAAAILLGDLALAWADDMLHASGLPPEAM 168 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQ--VFMIQKMKTGALMC-FACE 194 +R + +L GQ LD+ DET I ++K+ + E Sbjct: 169 ARGLRPWRAMRTE-------VLAGQYLDLLGPVRGDETPQAALRIDELKSASYTVQRPLE 221 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A + E LR FG ++G+ FQL DDLL Sbjct: 222 LGAELAGADETALEALRRFGSDIGVAFQLRDDLL 255 >gi|238853177|ref|ZP_04643564.1| farnesyltranstransferase [Lactobacillus gasseri 202-4] gi|238834231|gb|EEQ26481.1| farnesyltranstransferase [Lactobacillus gasseri 202-4] Length = 338 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 13/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ +IE +H +LIHDD+ +D +R G+P++ +Y + A+ AG+ L + ++S Sbjct: 82 KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS- 138 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190 +N +S L + +Q +L G+ + + I E + K KTG L Sbjct: 139 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFG 191 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AC GA + + + + FGE LG FQL DD+LD Sbjct: 192 LACFIGAYESGIKVTKALKAKKFGEYLGQAFQLRDDILD 230 >gi|163791759|ref|ZP_02186144.1| heptaprenyl diphosphate synthase, component II, putative [Carnobacterium sp. AT7] gi|159872973|gb|EDP67092.1| heptaprenyl diphosphate synthase, component II, putative [Carnobacterium sp. AT7] Length = 326 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 25/203 (12%) Query: 42 AIRYALL-----GGKKIRSFLVTECASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPS 94 +I +AL+ GGK +R T S F +H A AAIE +H +LIHDD+ Sbjct: 34 SIEHALMDMMHTGGKLVRPAF-TLLFSTFGEDHDPRRARAFAAAIEILHMATLIHDDV-- 90 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +D+ RRG+ T+ +Y + A+ AG+ L T +F++++ +K Q+ ++ Sbjct: 91 IDDSPKRRGQSTIQSKYGKDVAVYAGDYLFTVSFKLLTDYSNSMK-----QMQINTN--- 142 Query: 155 GLQGMLGGQMLDIQDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLR 211 G++ +L G++ + + + V ++ Q KT L AC SGA+ Q+E+ Sbjct: 143 GMERILMGEIDQMHLRYNQKITVRNYLTQISGKTAQLFALACYSGAL--EGGQSERFARN 200 Query: 212 CF--GENLGIIFQLADDLLDCEE 232 C+ G ++G+ FQ+ DD+LD + Sbjct: 201 CYYIGSHIGMAFQIMDDILDYSQ 223 >gi|269960912|ref|ZP_06175282.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3] gi|269834352|gb|EEZ88441.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3] Length = 323 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ T+L +++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSDAVNVIAEGEVQ-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A + + + +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEEVEVAFQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|13541888|ref|NP_111576.1| octaprenyl diphosphate synthase [Thermoplasma volcanium GSS1] gi|14325322|dbj|BAB60226.1| farnesyl pyrophosphate synthase [Thermoplasma volcanium GSS1] Length = 326 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 12/184 (6%) Query: 49 GGKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R L + S + + L + A E IH SLIHDD+ +D+ +RRG+PT+ Sbjct: 44 GGKRFRPLLTILAFESSTDDPYFKILDLAAGYELIHTASLIHDDI--IDDSPMRRGRPTL 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + AI+ + L A+E+ S + S++M + + +L L Sbjct: 102 SYKEGINNAIVVADYLFAKAYELGSRYGPLV-----SKVMADASSRLAEGQILEAVNLGN 156 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGA-IMAHASQNEKERLRCFGENLGIIFQLADD 226 D I E + I + KT AC GA I+A A + +E L F NLG+ FQ+ DD Sbjct: 157 LD--ITEDTYYKIIENKTAHFFE-ACALGATIVAEADRPTREILSNFAFNLGMAFQVTDD 213 Query: 227 LLDC 230 +LD Sbjct: 214 ILDI 217 >gi|307731052|ref|YP_003908276.1| polyprenyl synthetase [Burkholderia sp. CCGE1003] gi|323527410|ref|YP_004229563.1| polyprenyl synthetase [Burkholderia sp. CCGE1001] gi|307585587|gb|ADN58985.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003] gi|323384412|gb|ADX56503.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001] Length = 330 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPALLLLVAGALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +R +LS NI +G + Q+L++ Sbjct: 109 ALFGNAASVLVGDFLYSRSFQMMVGVG-----KMRVMEILSEATNIISEGEVL-QLLNMH 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A + GA++A A + FG +G FQ+ DD L Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGADARTEAAAAEFGRRIGTAFQIMDDWL 222 Query: 229 D 229 D Sbjct: 223 D 223 >gi|195388636|ref|XP_002052985.1| GJ23628 [Drosophila virilis] gi|194151071|gb|EDW66505.1| GJ23628 [Drosophila virilis] Length = 445 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +IS ++ Sbjct: 200 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMISRLRSDDV 257 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + SQ++ L +Q LG + E +E + K KT +L+ A ++ A Sbjct: 258 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 309 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A N E +G N+G+ FQL DD+LD Sbjct: 310 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 341 >gi|171912385|ref|ZP_02927855.1| Farnesyltranstransferase [Verrucomicrobium spinosum DSM 4136] Length = 336 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 16/184 (8%) Query: 50 GKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK+IR L V + V H ++ +E IH SL+HDD+ MD IRR PT Sbjct: 52 GKRIRPALAVLAGGATGGVTH-EHRQLSIILEMIHIASLVHDDI--MDGATIRREMPTAA 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ L YA E+ TQ ++ + + + ++ G++L Q Sbjct: 109 AKWGNALSVLLGDSLFAYALEL----ATQFDESSICRKIARASRDVAC-----GEILQTQ 159 Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 F + + F I +MKT AL A E GA + S + + +G LG +Q+ D Sbjct: 160 RRFDFTLSMEEYFKIIEMKTAALFASATELGARLNGCSDSVVASMYNYGNRLGTAYQIYD 219 Query: 226 DLLD 229 D +D Sbjct: 220 DCID 223 >gi|329116532|ref|ZP_08245249.1| polyprenyl synthetase [Streptococcus parauberis NCFD 2020] gi|326906937|gb|EGE53851.1| polyprenyl synthetase [Streptococcus parauberis NCFD 2020] Length = 326 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 25/238 (10%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 +K E K ID +++ L+ Q A+ +++D + + + GGK +R + + Sbjct: 6 NKFPEIQKEIDAVVE-LIGQRAN---VRNSDIKAAIVDLSTAGGKYLRPAFFFFFSQFGD 61 Query: 67 ---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 N ++ A++E +H +LIHDD+ +D+ +RRG+ T+ Q+ + A+ G+ L Sbjct: 62 QEQKNRDQLRQIAASLEILHMATLIHDDV--IDDSPLRRGQKTIQTQFGKDVAVYTGDFL 119 Query: 124 LTYAFEII-----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 T FE+I SP + Q+++ G L L E E+ + Sbjct: 120 FTIFFELILESMQDSPYMTINAKAMKQILI---------GELEQMELYFNQEQDVESYLT 170 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KT L A + GA A ASQ+ G ++G+ FQ+ DD+LD D PK Sbjct: 171 AISG-KTAELFQLASQEGAYFAGASQDVVSLAGRIGHHIGMTFQILDDILDYTAD-PK 226 >gi|296130537|ref|YP_003637787.1| Trans-hexaprenyltranstransferase [Cellulomonas flavigena DSM 20109] gi|296022352|gb|ADG75588.1| Trans-hexaprenyltranstransferase [Cellulomonas flavigena DSM 20109] Length = 335 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + N + A +E H +L HDD+ MD+ +RRG P+ H Sbjct: 51 GGKRLRPLLTLLTAELGDGNRREVIDAAAVVELTHLATLYHDDV--MDSAPLRRGAPSAH 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A I+S + +R Q + + GQ+ + Sbjct: 109 EVWGNSVAILTGDLLFARASSIVSGLGPE---AVRIQAQT-------FERLCLGQLHETV 158 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 DE V + KT +L+ + GA+ A + + FGE +G+ FQLAD Sbjct: 159 GPRPDEDPVEHYLQVLADKTASLIATSARFGAMFAGCRPDVVRTVTQFGEIVGVAFQLAD 218 Query: 226 DLLDCEED 233 D++D D Sbjct: 219 DVIDLTSD 226 >gi|111220513|ref|YP_711307.1| heptaprenyl diphosphate synthase component II [Frankia alni ACN14a] gi|111148045|emb|CAJ59711.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase subunit 2) [Frankia alni ACN14a] Length = 296 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R +V A + + + AIE H +L HDD+ MD RRG + + Sbjct: 12 GGKRFRPIVVLLAAQFADPHAPGVVPAAVAIELTHLSTLYHDDV--MDEAPRRRGAASAN 69 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ AI+ G+ L A +I + ++ L I + GQ+ + Sbjct: 70 ARWTNTVAILTGDYLFARASDITA--------DLGPAATRILARTIAT--LCEGQIRETV 119 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D+ V + KT +L+ + GA++A A + L FGE G+ FQL+D Sbjct: 120 GPAPDQDPVEHYLRVVTEKTASLIATSGRLGAMLAGADPVTVDTLATFGELFGVAFQLSD 179 Query: 226 DLLDCEED 233 D++D D Sbjct: 180 DIIDVASD 187 >gi|325289830|ref|YP_004266011.1| Trans-hexaprenyltranstransferase [Syntrophobotulus glycolicus DSM 8271] gi|324965231|gb|ADY56010.1| Trans-hexaprenyltranstransferase [Syntrophobotulus glycolicus DSM 8271] Length = 322 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 23/222 (10%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECA 62 L S+++ + +++ LD LL +D +LS LL GGK++R Sbjct: 6 LFSEIKADLTKVEKELDKLLAV---------DDPILSKTCVYLLQAGGKRMRPGFTLLSG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 FN + L V AIE IH +L+HDD+ +D RRG+PT+ + ++ G+ Sbjct: 57 RFFNYDFKKILPVAMAIELIHMATLVHDDV--VDASLTRRGRPTLAAGWGNTVSVATGDF 114 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLDIQDEFIDETQVFMI 180 L A E+I ++ D ++++ ++ + QG + D++ F Q + Sbjct: 115 LFAKALEMIG----KIDDPGVAKILADVSVEM-CQGEIQQIWSAFDVKQNF---KQYYYR 166 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + KT L+ +C GA+++ S L +G LGI FQ Sbjct: 167 IRRKTALLIGLSCRLGAMVSDGSLRHMWLLETYGHCLGIAFQ 208 >gi|78779003|ref|YP_397115.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9312] gi|78712502|gb|ABB49679.1| Trans-hexaprenyltranstransferase [Prochlorococcus marinus str. MIT 9312] Length = 323 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 21/222 (9%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV----TECASLFNVNHLT 71 ++ LDDL+ + + + H +A GGK++R +V +S F + + Sbjct: 11 VENDLDDLIFELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISSEFCLTN-K 69 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L A + Sbjct: 70 HKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHL 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGA 187 ++ DN+ +LS + + G++ + F D Q F I K KT + Sbjct: 128 ANL-----DNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFSKYINKSYCKTAS 177 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ +C++ +++ S + L FG+N+G+ FQ+ DD+LD Sbjct: 178 LIANSCKAAGVLSDLSDEKLNSLYDFGKNIGLAFQVVDDILD 219 >gi|118462300|ref|YP_883928.1| polyprenyl synthetase [Mycobacterium avium 104] gi|118163587|gb|ABK64484.1| polyprenyl synthetase [Mycobacterium avium 104] Length = 395 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 24/202 (11%) Query: 45 YALLGGKKIRSFL-VTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 Y L GGK +R L + C L HL A L A +E H LIHDD+ D + RR Sbjct: 55 YPLRGGKALRPALSIATCLGLGG--HLEAILPTAATLELYHNAFLIHDDI--EDESWWRR 110 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGM-- 159 GKPT+HI + A+ G+ +L+ + + L DN+ R L +L + M Sbjct: 111 GKPTLHIDHGVPVAVNVGDAMLSLSLQ-------PLLDNVERVGLGPALRILRAVATMTR 163 Query: 160 --LGGQMLDI-----QDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLR 211 + GQ L++ +D+ + ++KT ++GA+ A ++ + L Sbjct: 164 KTVDGQALELDWVHSNTWRLDDADYLEMVELKTSWYSFITPLQAGAVAAGSTPDRMAPLE 223 Query: 212 CFGENLGIIFQLADDLLDCEED 233 G +LG FQ+ DDLL+ D Sbjct: 224 SLGRHLGAAFQITDDLLNLRAD 245 >gi|195107776|ref|XP_001998484.1| GI23994 [Drosophila mojavensis] gi|193915078|gb|EDW13945.1| GI23994 [Drosophila mojavensis] Length = 435 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +IS ++ Sbjct: 190 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMISRLRSDDV 247 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + SQ++ L +Q LG + E +E + K KT +L+ A ++ A Sbjct: 248 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 299 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A N E +G N+G+ FQL DD+LD Sbjct: 300 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 331 >gi|148925911|ref|ZP_01809598.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8486] gi|145844897|gb|EDK22001.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8486] Length = 297 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +D+L+ Q + + +LS ++ GKK+RS L+ A + A ++ AAI Sbjct: 4 IDELIKQFLQELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D +RRG +V+ ++ A++ G+ L + AF +S + Sbjct: 56 ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARF- 112 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197 S+ + ++ +G M +D+ ++F I++ + KT L+ + GA Sbjct: 113 --------TSIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+A + + +G+NLG+ FQ+ DD+LD + D Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197 >gi|12082285|dbj|BAB20883.1| GGPP synthase [Taraxacum japonicum] Length = 127 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 3/127 (2%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGKPT H Y E A++AG+ LL +AF+ I+S + L +IG Sbjct: 1 NDDFRRGKPTNHKVYGEDVAVLAGDSLLAFAFQHIASATVGASPARVLAAVGELAKSIGT 60 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI + Q+ I KT AL+ A GAI+ S + E+LR F Sbjct: 61 EGLVAGQVVDIASTGAKDVGLEQLEFIHIHKTAALLEAAVVLGAIVGGGSDTQVEKLRKF 120 Query: 214 GENLGII 220 +G++ Sbjct: 121 ARCIGLL 127 >gi|299783324|gb|ADJ41322.1| Trans-hexaprenyltranstransferase [Lactobacillus fermentum CECT 5716] Length = 328 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 21/211 (9%) Query: 28 ASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTA----LRVGAAIECI 82 A+ ++T+ + +L SA+ + A GGK +R ASL +++ +IE + Sbjct: 25 AARIKTK-DGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQRDRLIKLATSIEVL 83 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H +LIHDD+ +D+ RRG+ ++ ++ + A+ +G+ L T F++I++ Sbjct: 84 HMATLIHDDI--IDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDLITTTTATTPFLT 141 Query: 143 -RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMIQKM--KTGALMCFACESGAI 198 +Q+M H I L G++ + D F D+T + ++ + KT AL A GA Sbjct: 142 TNAQIM----HRI-----LSGELGQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAY 192 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A Q + G+N+GI FQ+ DD+LD Sbjct: 193 FGGADQRTVALAKRIGQNVGIAFQILDDILD 223 >gi|157868092|ref|XP_001682599.1| polyprenyl synthase [Leishmania major strain Friedlin] gi|68126054|emb|CAJ07107.1| putative polyprenyl synthase [Leishmania major strain Friedlin] Length = 742 Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 22/205 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK RS ++ C + + + R A E +H SLI DD+ DN +RRG VH Sbjct: 446 GGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDI--QDNSVVRRGGKCVH 503 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++Y TAI AG+ F + + Q ++ + L ++ L G GQ LDI Sbjct: 504 VEYGVATAINAGSACY---FMGPRAARIQDLPPEKASRIYQLYFDVLLAGH-AGQGLDIY 559 Query: 169 D---------EFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 E D + +F I KTG + C ++ A E + FG Sbjct: 560 RLDYLMPKVVETGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAPTVLSEAVERFGL 619 Query: 216 NLGIIFQLADDLLDC---EEDLPKK 237 LG+ FQ+ DD L+ EE+L ++ Sbjct: 620 ALGLAFQIVDDALNIRGFEENLKEE 644 >gi|257866353|ref|ZP_05646006.1| polyprenyl synthetase [Enterococcus casseliflavus EC30] gi|257873131|ref|ZP_05652784.1| polyprenyl synthetase [Enterococcus casseliflavus EC10] gi|257800311|gb|EEV29339.1| polyprenyl synthetase [Enterococcus casseliflavus EC30] gi|257807295|gb|EEV36117.1| polyprenyl synthetase [Enterococcus casseliflavus EC10] Length = 326 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 16/197 (8%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGY 99 I + GGK +R L A L + ++ ++ A++E +H +LIHDD+ +D+ Sbjct: 38 IDFTYSGGKMLRPALFFLFADLGDPHYKKTDQLTKIAASLEILHMATLIHDDI--IDDSP 95 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RR + TV +Y + A+ G+ L T FE+ L +++ L T+ ++ + Sbjct: 96 LRRSQVTVQAKYGKDIAVYTGDLLFTQFFEL-------LIESMNGSPFLK-TNAQAMKRL 147 Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 L G++ + + I E+ +Q + KT L AC GA +ER G N Sbjct: 148 LLGELDQMHTRYNIHESIDDYLQSINGKTAELFWLACLEGAHFGGLDTENQERAGEIGRN 207 Query: 217 LGIIFQLADDLLDCEED 233 +GI FQ+ DD+LD D Sbjct: 208 IGIAFQVFDDILDYTSD 224 >gi|157414822|ref|YP_001482078.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 81116] gi|157385786|gb|ABV52101.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|307747460|gb|ADN90730.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter jejuni subsp. jejuni M1] gi|315931736|gb|EFV10691.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 327] Length = 297 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +D+L+ Q + + +LS ++ GKK+RS L+ A + A ++ AAI Sbjct: 4 IDELIKQFLEELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D +RRG +V+ ++ A++ G+ L + AF +S + Sbjct: 56 ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFT 113 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197 S+ + ++ +G M +D+ ++F I++ + KT L+ + GA Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+A + + +G+NLG+ FQ+ DD+LD + D Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197 >gi|156848549|ref|XP_001647156.1| hypothetical protein Kpol_1036p41 [Vanderwaltozyma polyspora DSM 70294] gi|156117840|gb|EDO19298.1| hypothetical protein Kpol_1036p41 [Vanderwaltozyma polyspora DSM 70294] Length = 471 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 39/193 (20%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL---TYAFEI 130 R+ +E IH SL+HDD+ +D+ RRG+P+ + + A++AG+ LL T + Sbjct: 176 RLAEIVEMIHTASLLHDDV--IDHSETRRGRPSGNKAFTNKMAVLAGDFLLGRATVSISR 233 Query: 131 ISSPKT-----------------QLK-----------DNIRSQLMLSL---THNI-GLQG 158 + +P+ QLK D R +L S+ T+++ + Sbjct: 234 LRNPEVVELMSNSIANLVEGEFMQLKNTAVDNNLNTIDEGRKELPPSIGKFTNDLHDYRV 293 Query: 159 MLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 + +L +D I+ + + K +KT +L+ AC S AI++ AS + +G+N Sbjct: 294 PINDNLLTSKDAMINTAFEYYLHKTYLKTASLISMACRSSAILSGASPEVVDSCYEYGKN 353 Query: 217 LGIIFQLADDLLD 229 LGI FQL DD+LD Sbjct: 354 LGICFQLVDDMLD 366 >gi|29829539|ref|NP_824173.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] gi|29606647|dbj|BAC70708.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680] Length = 337 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 11/188 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A T L A+E +H +SL+HDDL MD RR + TV Sbjct: 52 GGKAVRPALALLSAQAAGAPAETGLPGAVAVELVHNFSLLHDDL--MDGDEERRHRRTVW 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ LL A E++ L + + + + ++ GQ+ D+ Sbjct: 110 TLWGASGAILTGDALLALAQEVL------LDCGLPTGAAAARLLARTTRDLIRGQVQDVA 163 Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + + + KTGAL+ + GA++A A + L +G+ +G+ FQL D Sbjct: 164 FERRAHVPIEECVDMAAGKTGALLSASAAIGAVLAGAPVTTVDALALYGQQVGLAFQLTD 223 Query: 226 DLLDCEED 233 D+L D Sbjct: 224 DVLGIWGD 231 >gi|283777976|ref|YP_003368731.1| hypothetical protein Psta_0175 [Pirellula staleyi DSM 6068] gi|283436429|gb|ADB14871.1| protein of unknown function DUF116 [Pirellula staleyi DSM 6068] Length = 673 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 5/166 (3%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T R +IE H SL+HDD+ D+ R G+ TVH ++ TAI G+ L+ + + Sbjct: 379 TVKRAALSIETFHKASLVHDDI--EDDDAFRYGEETVHRRFGTPTAINVGDYLIGMGYRL 436 Query: 131 ISSPKTQLKDNIRSQLMLSLTH-NIGLQGMLGGQML--DIQDEFIDETQVFMIQKMKTGA 187 +S + + + ++ L +I L G ++L D +D+ + I +KT Sbjct: 437 VSKQSRAMGPDTAADILDILADAHIRLSEGQGAELLWRDARDKRLSPLDALKIYALKTSP 496 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A SGA +A E LR F NLG+ FQ+ +DL D + D Sbjct: 497 AFEAALLSGARLAGDVTQYLEPLRQFARNLGVAFQILNDLGDWQGD 542 >gi|257875966|ref|ZP_05655619.1| polyprenyl synthetase [Enterococcus casseliflavus EC20] gi|257810132|gb|EEV38952.1| polyprenyl synthetase [Enterococcus casseliflavus EC20] Length = 326 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 16/197 (8%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGY 99 I + GGK +R L A L + ++ ++ A++E +H +LIHDD+ +D+ Sbjct: 38 IDFTYSGGKMLRPALFFLFADLGDPHYKKTDQLTKIAASLEILHMATLIHDDI--IDDSP 95 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RR + TV +Y + A+ G+ L T FE+ L +++ L T+ ++ + Sbjct: 96 LRRSQVTVQAKYGKDIAVYTGDLLFTQFFEL-------LIESMNGSPFLK-TNAQAMKRL 147 Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 L G++ + + I E+ +Q + KT L AC GA +ER G N Sbjct: 148 LLGELDQMHTRYNIHESIDDYLQSINGKTAELFWLACLEGAHFGGLDTENQERAGEIGRN 207 Query: 217 LGIIFQLADDLLDCEED 233 +GI FQ+ DD+LD D Sbjct: 208 IGIAFQVFDDILDYTSD 224 >gi|257054017|ref|YP_003131850.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940] gi|256692780|gb|ACV13117.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940] Length = 308 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 27/189 (14%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV + + +V AL + A +E +H ++L+HDD+ +D RR +PT+ Sbjct: 43 GGKRIRPGLVFLISEMVDVPREDALDIAAGVELLHNFTLVHDDI--IDGDEYRRDEPTLW 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +Y E +AI G+ + A + P+T+ ++ ++++T+ G+ +DI Sbjct: 101 AKYGEGSAINLGDMMFAKAI-LCFPPETR---DLALDTVITVTN---------GEQMDI- 146 Query: 169 DEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 +F + + + + M KTGAL+ ++ +A + L F +LG FQ+ Sbjct: 147 -DFAERRDITVEEYMTMVRRKTGALLELCVDAPLALAETDLD----LSGFT-SLGPAFQI 200 Query: 224 ADDLLDCEE 232 DDLLD +E Sbjct: 201 RDDLLDFQE 209 >gi|57238259|ref|YP_178660.1| polyprenyl synthetase family protein [Campylobacter jejuni RM1221] gi|57167063|gb|AAW35842.1| polyprenyl synthetase family protein [Campylobacter jejuni RM1221] gi|284925804|gb|ADC28156.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315057959|gb|ADT72288.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni S3] Length = 297 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +D+L+ Q + + +LS ++ GKK+RS L+ A + A ++ AAI Sbjct: 4 IDELIKQFLQELGYEPILNMLSNVK----SGKKLRSKLLLTIADESEI----AFKICAAI 55 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D +RRG +V+ ++ A++ G+ L + AF +S + Sbjct: 56 ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFA 113 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197 S+ + ++ +G M +D+ ++F I++ + KT L+ + GA Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+A + + +G+NLG+ FQ+ DD+LD + D Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197 >gi|86149236|ref|ZP_01067468.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|121612193|ref|YP_001000241.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005197|ref|ZP_02270955.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|218562193|ref|YP_002343972.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840594|gb|EAQ57851.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|87250330|gb|EAQ73288.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|112359899|emb|CAL34687.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315927039|gb|EFV06394.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929574|gb|EFV08762.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 305] Length = 297 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +D+L+ Q + + +LS ++ GKK+RS L+ A + A ++ AAI Sbjct: 4 IDELIKQFLQELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D +RRG +V+ ++ A++ G+ L + AF +S + Sbjct: 56 ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFA 113 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197 S+ + ++ +G M +D+ ++F I++ + KT L+ + GA Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+A + + +G+NLG+ FQ+ DD+LD + D Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197 >gi|53802938|ref|YP_115384.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str. Bath] gi|53756699|gb|AAU90990.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str. Bath] Length = 340 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + A IE IH +L+HDD+ +D +RRG+ + + Sbjct: 61 GGKRLRPMLHLLSAKALGYPGDHHITLAAVIEFIHTATLLHDDV--VDESALRRGQDSAN 118 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +++D +R +LS T +G + Q+L+ Sbjct: 119 ALWGNSASVLVGDYLYSRSFELM----VRVQD-MRVMDILSRTTTAIAEGEVL-QLLNCN 172 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DE + + KT L A + A++A +S +E L+ +G LGI FQL DD+L Sbjct: 173 NPATDEGRYLDVISRKTAILFSAAAQLAAVLAGSSHAVEESLKNYGTYLGIAFQLKDDVL 232 Query: 229 DCEED 233 D + D Sbjct: 233 DYKAD 237 >gi|10801562|dbj|BAB16694.1| GGPP synthase 2 [Nicotiana tabacum] Length = 127 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 3/127 (2%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H Y E A++AG+ LL +AFE I++ + + + L +IG Sbjct: 1 NDDLRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIATATAGVSPSRILAAIGELAKSIGT 60 Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ+ DI + + + I KT AL+ + GAI+ + E E+LR F Sbjct: 61 EGLVAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRIF 120 Query: 214 GENLGII 220 +G++ Sbjct: 121 ARCIGLL 127 >gi|88596918|ref|ZP_01100154.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|88190607|gb|EAQ94580.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 84-25] Length = 297 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +D+L+ Q + + +LS ++ GKK+RS L+ A + A ++ AAI Sbjct: 4 IDELIKQFLEELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D +RRG +V+ ++ A++ G+ L + AF +S + Sbjct: 56 ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFA 113 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197 S+ + ++ +G M +D+ ++F I++ + KT L+ + GA Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+A + + +G+NLG+ FQ+ DD+LD + D Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197 >gi|325567558|ref|ZP_08144225.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC 12755] gi|325158991|gb|EGC71137.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC 12755] Length = 334 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 16/197 (8%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGY 99 I + GGK +R L A L + ++ ++ A++E +H +LIHDD+ +D+ Sbjct: 46 IDFTYSGGKMLRPALFFLFADLGDPHYKKTDQLTKIAASLEILHMATLIHDDI--IDDSP 103 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RR + TV +Y + A+ G+ L T FE+ L +++ L T+ ++ + Sbjct: 104 LRRSQVTVQAKYGKDIAVYTGDLLFTQFFEL-------LIESMNGSPFLK-TNAQAMKRL 155 Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 L G++ + + I E+ +Q + KT L AC GA +ER G N Sbjct: 156 LLGELDQMHTRYNIHESIDDYLQSINGKTAELFWLACLEGAHFGGLDTENQERAGEIGRN 215 Query: 217 LGIIFQLADDLLDCEED 233 +GI FQ+ DD+LD D Sbjct: 216 IGIAFQVFDDILDYTSD 232 >gi|255513479|gb|EET89745.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 364 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 12/189 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + + + E +H +L+HDD+ D RRG +V+ Sbjct: 71 GGKRIRPIITLLVIEALGKDPMDYIEFSMIPEILHTATLMHDDIE--DGSETRRGAQSVY 128 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +Y A+ G+ L + +++ K +L D ++ +++ + ++ G+ GQ DI Sbjct: 129 KKYGMDIALNLGDFLFFFPIKVLLDSK-KLDDAVKYRILKAHEKHMIRIGL--GQATDIA 185 Query: 169 DEF-------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 I E + KTG L+ FA E GAI+ A + ERL F +G+ F Sbjct: 186 WHRALTDIGKITEENYMRVAFDKTGVLLGFAAELGAIIGGAEDADVERLGKFASMIGVAF 245 Query: 222 QLADDLLDC 230 Q+ DD+L+ Sbjct: 246 QIEDDILNI 254 >gi|157887530|emb|CAM98716.1| hypothetical protein [Plasmodiophora brassicae] Length = 376 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 41/240 (17%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRS---FLVTECAS 63 L S R+ ++DD++ + + LL+++ L GGK++R L+ S Sbjct: 55 LSRVSDRVSFVIDDVVSSFSGRLP------LLASVSKLLFESGGKRLRPSLCLLMAGALS 108 Query: 64 LFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + A+ +V E IH SL+HDD+ +D RR PT ++Q+ + +I+ Sbjct: 109 PARRDPSAAIGPVDKVAQISEMIHVASLLHDDV--LDGATTRRNTPTANVQFGDKASILG 166 Query: 120 GNGLLTYAF---------EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170 G+ LL+ + E +S T + D + ++M N+G Sbjct: 167 GDFLLSRSSIILASLGSCEAVSLMATIISDLVSGEIMQMRPMNVG--------------S 212 Query: 171 FIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 D + ++ + KT +LM +C + A++ S + + FG+ LG+ FQL DDLLD Sbjct: 213 LSDRLEYYLSKSYRKTASLMANSCRTVAVIDDLSSDLQNAAMDFGKYLGLCFQLTDDLLD 272 >gi|329568427|gb|EGG50234.1| polyprenyl synthetase [Enterococcus faecalis TX1467] Length = 326 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 22/212 (10%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + T++ D + + A GGK +R FL + L++ A++E +H +L Sbjct: 26 LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D+ +RRG T+ QY + A+ G+ L T F +I+ S+ M Sbjct: 86 IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNG------SEFM 137 Query: 148 LSLTHNIGLQGM----LG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 I QGM LG GQM D + KT L +C GA H Sbjct: 138 -----KINAQGMKRLLLGELGQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGH 192 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +S+ + + G ++GI FQ+ ++LD D Sbjct: 193 SSKEVQRLAKRIGRHIGIAFQVYANILDYTAD 224 >gi|184155577|ref|YP_001843917.1| polyprenyl synthase [Lactobacillus fermentum IFO 3956] gi|227514942|ref|ZP_03944991.1| trans-hexaprenyltranstransferase [Lactobacillus fermentum ATCC 14931] gi|183226921|dbj|BAG27437.1| polyprenyl synthase [Lactobacillus fermentum IFO 3956] gi|227086706|gb|EEI22018.1| trans-hexaprenyltranstransferase [Lactobacillus fermentum ATCC 14931] Length = 328 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 19/189 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK +R ASL +++ +IE +H +LIHDD+ +D+ RRG+ Sbjct: 46 GGKFLRPAFFWLFASLTGQPQPEQRDRLIKLATSIEVLHMATLIHDDI--IDDSPERRGR 103 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQ 163 ++ ++ + A+ +G+ L T F++I++ +Q+M H I L G+ Sbjct: 104 ISIQAEFGKDVAVYSGDYLFTIFFDLITTTTATTPFLTTNAQIM----HRI-----LSGE 154 Query: 164 MLDIQDEFI-DETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + + D F D+T + ++ + KT AL A GA A Q + G+N+GI Sbjct: 155 LGQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGADQRTVALAKRIGQNVGIA 214 Query: 221 FQLADDLLD 229 FQ+ DD+LD Sbjct: 215 FQILDDILD 223 >gi|86151722|ref|ZP_01069936.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85841351|gb|EAQ58599.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. jejuni 260.94] Length = 297 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +D+L+ Q + + +LS ++ GKK+RS L+ A + A ++ AAI Sbjct: 4 IDELIKQFLEELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D +RRG +V+ ++ A++ G+ L + AF +S + Sbjct: 56 ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKLDARFA 113 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197 S+ + ++ +G M +D+ ++F I++ + KT L+ + GA Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+A + + +G+NLG+ FQ+ DD+LD + D Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197 >gi|324505880|gb|ADY42520.1| Decaprenyl-diphosphate synthase subunit 1 [Ascaris suum] Length = 432 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 30/168 (17%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI--- 130 ++ E IH SL+HDD+ +D +RRG PTV+ + A++ G+ +L A ++ Sbjct: 178 KIAVISEMIHTASLVHDDV--IDESDVRRGSPTVNAIWGNKMAVLVGDFILARATQVLCS 235 Query: 131 ------ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQ 181 IS T ++D +R + M M G D D+++ +T Sbjct: 236 IARPNVISVMATIIEDLVRGEFM----------QMTTGSETDATLRFDKYMAKTY----- 280 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L +C+S A++A + +E +G +LG+ FQL DDLLD Sbjct: 281 -SKTASLFANSCKSAAMLADIPEANEEIAFEYGRSLGLAFQLVDDLLD 327 >gi|167586043|ref|ZP_02378431.1| Trans-hexaprenyltranstransferase [Burkholderia ubonensis Bu] Length = 331 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 10/182 (5%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + L+ +L +H + + A +E IH +L+HDD+ +D +RRG+ T Sbjct: 52 GGKRLRPALLLFVAGALGETSHQRHV-LAAVVEFIHTATLLHDDV--VDESELRRGRQTA 108 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 109 NALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNM 162 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D +DE + + + KT L + GA++A A + +G +G FQ+ DD Sbjct: 163 HDADVDEARYMQVIRYKTAKLFEASARLGAVLAGADATTEAAAAEYGRRIGTAFQIMDDW 222 Query: 228 LD 229 LD Sbjct: 223 LD 224 >gi|326781297|ref|ZP_08240562.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1] gi|326661630|gb|EGE46476.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1] Length = 425 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 43/253 (16%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSA------------IRYALLGGKKIRSFLV 58 E+++ +D + D +L+TA + + D +++ + L GGK++R L+ Sbjct: 33 EDARGVDADVVDAVLRTARAVLAERMDEAMASDALFCDELARRVADFTLDGGKRVRPRLL 92 Query: 59 TECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------- 109 TA LR+G A+E I +LIHDD+ MD +RRGKP VHI Sbjct: 93 WWGMRSCGAAETTAALRLGVALELIQSCALIHDDV--MDRSRLRRGKPAVHIGLAERAGY 150 Query: 110 --------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 + A++AG+ L +A + ++ +T L ++ + + L + + M+ Sbjct: 151 SPDSGRGSAFGASAAVLAGDLALAWADDTVA--ETALS-AVQRRRIGPLWRAMRTE-MVA 206 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGAL--MCFACESGAIMAHASQNEKER----LRCFGE 215 GQ LD++ + + V Q ++T L ++ E + A E LR G Sbjct: 207 GQYLDLRGQVSGGSSVE--QALRTACLKSASYSVERPLALGAALAGADEATTDALRSAGR 264 Query: 216 NLGIIFQLADDLL 228 GI FQL DDLL Sbjct: 265 CAGIAFQLRDDLL 277 >gi|283955963|ref|ZP_06373453.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 1336] gi|283792623|gb|EFC31402.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 1336] Length = 297 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +D+L+ Q + + +LS ++ GKK+RS L+ A + A ++ AAI Sbjct: 4 IDELIKQFLQELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D +RRG +V+ ++ A++ G+ L + AF +S + Sbjct: 56 ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFA 113 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197 S+ + ++ +G M +D+ ++F I++ + KT L+ + GA Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+A + + +G+NLG+ FQ+ DD+LD + D Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197 >gi|217420539|ref|ZP_03452044.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 576] gi|217395951|gb|EEC35968.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 576] Length = 242 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A N + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 111 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A GA++A A + +G +G FQ+ DD L Sbjct: 165 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|56751750|ref|YP_172451.1| solanesyl diphosphate synthase [Synechococcus elongatus PCC 6301] gi|56686709|dbj|BAD79931.1| solanesyl diphosphate synthase [Synechococcus elongatus PCC 6301] Length = 323 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 19/188 (10%) Query: 49 GGKKIRSFLV------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R +V T H R+ E IH SL+HDD+ +D +RR Sbjct: 44 GGKRLRPAVVLLLSRATMPGQEITPRHR---RLAEITEMIHTASLVHDDV--VDESSLRR 98 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM-LG 161 G PTVH + A++AG+ L A ++ + + SQ+++ L LQG+ Sbjct: 99 GIPTVHSSFSNRVAVLAGDFLFAQASWHLAHLDSLTVVKLLSQVIMDLAEGEILQGLNRF 158 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 L I+ ++D++ KT +L+ + + ++++ +S+ + L +G +LG+ F Sbjct: 159 DSSLSIE-VYLDKSY------YKTASLLANSARAASVLSGSSETVCDALYDYGRSLGLAF 211 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 212 QIVDDILD 219 >gi|260662978|ref|ZP_05863871.1| polyprenyl synthase [Lactobacillus fermentum 28-3-CHN] gi|260552599|gb|EEX25599.1| polyprenyl synthase [Lactobacillus fermentum 28-3-CHN] Length = 327 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 19/189 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK +R ASL +++ +IE +H +LIHDD+ +D+ RRG+ Sbjct: 45 GGKFLRPAFFWLFASLTGQPQPEQRDRLIKLATSIEVLHMATLIHDDI--IDDSPERRGR 102 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQ 163 ++ ++ + A+ +G+ L T F++I++ +Q+M H I L G+ Sbjct: 103 ISIQAEFGKDVAVYSGDYLFTIFFDLITTTTATTPFLTTNAQIM----HRI-----LSGE 153 Query: 164 MLDIQDEFI-DETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + + D F D+T + ++ + KT AL A GA A Q + G+N+GI Sbjct: 154 LGQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGADQRTVALAKRIGQNVGIA 213 Query: 221 FQLADDLLD 229 FQ+ DD+LD Sbjct: 214 FQILDDILD 222 >gi|186477401|ref|YP_001858871.1| polyprenyl synthetase [Burkholderia phymatum STM815] gi|184193860|gb|ACC71825.1| Polyprenyl synthetase [Burkholderia phymatum STM815] Length = 330 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 8/155 (5%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F+++ Sbjct: 77 LAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVG- 133 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 +R +LS NI +G + Q+L++ D +DE + + + KT L A + Sbjct: 134 ----VGKMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIRYKTAKLFEAAAQ 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA+++ A + FG +G FQ+ DD LD Sbjct: 189 LGAVLSGADATTEAAAAEFGRRIGTAFQIMDDWLD 223 >gi|78187081|ref|YP_375124.1| trans-hexaprenyltranstransferase [Chlorobium luteolum DSM 273] gi|78166983|gb|ABB24081.1| Trans-hexaprenyltranstransferase [Chlorobium luteolum DSM 273] Length = 324 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 25/202 (12%) Query: 44 RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 RY L GK+IR +V A++ R +E +H +LIHDD+ +D +RR Sbjct: 37 RYVLRQQGKQIRPAMVLLSAAVSGGVTDATYRAAIMVELLHSATLIHDDV--VDGAEMRR 94 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYA--FEIISSPKT---QLKDNIRSQLMLSLTHNIGLQ 157 G P+++ + +++ G+ LL+ + + S Q+ D +R Sbjct: 95 GLPSINAIWKNKISVLIGDYLLSRGLLYSLDSGDYGFLHQVSDAVRR------------- 141 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 M G++L IQ I E + KT +L+ +C GA+ A + + ++ +G Sbjct: 142 -MSEGEILQIQKTRSLDITEEDYLSVISDKTASLIASSCAMGALSATSDEKSILAMKRYG 200 Query: 215 ENLGIIFQLADDLLDCEEDLPK 236 E+LG+ FQ+ DDLLD D K Sbjct: 201 EHLGLAFQIRDDLLDYTGDSKK 222 >gi|226497916|ref|NP_001149100.1| prenyl transferase [Zea mays] gi|195624736|gb|ACG34198.1| prenyl transferase [Zea mays] Length = 407 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L + LT R+ IE IH SLIHDD+ +D+ +RR Sbjct: 124 GGKRLRPALVFLVSRATAELAALPELTTEHRRLAEIIEMIHTASLIHDDV--IDDSGMRR 181 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK T+H Y A++AG+ + + ++ N+ + ++ L + ++ G Sbjct: 182 GKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------NLENIEVIKLISQV-IKDFASG 232 Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F + + KT +L+ + S AI + E++ +G NLG+ Sbjct: 233 EIKQASTLFDCDVTLDDYLLKSYYKTASLIAASTRSAAIFSGVGSGVCEQMYEYGRNLGL 292 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 293 AFQVVDDILD 302 >gi|329960631|ref|ZP_08298974.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057] gi|328532504|gb|EGF59298.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057] Length = 324 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 16/187 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A L+ L A+E +H SL+HDD+ +D RRG+ +V+ Sbjct: 45 GKMMRPMLVLLAAKLYGEVCPATLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 ++ A+++G+ LL A ++ T R+ ++ + +G Q + G++L + + Sbjct: 103 IFNNKVAVLSGDYLL--ATSLVQVGLT------RNHAIIDIVSCLG-QDLAEGELLQLSN 153 Query: 170 ----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +F ++ +I+K KT L ++GA+ A + E R FGE +G+ FQ+ D Sbjct: 154 VSNLQFSEDVYFDVIRK-KTAVLFAACTKAGALSVGADDEKVEFARLFGEYIGLCFQIKD 212 Query: 226 DLLDCEE 232 D+ D E Sbjct: 213 DIFDYFE 219 >gi|116511014|ref|YP_808230.1| prenyl transferase [Lactococcus lactis subsp. cremoris SK11] gi|125623073|ref|YP_001031556.1| prenyl transferase [Lactococcus lactis subsp. cremoris MG1363] gi|116106668|gb|ABJ71808.1| Geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp. cremoris SK11] gi|124491881|emb|CAL96802.1| prenyl transferase [Lactococcus lactis subsp. cremoris MG1363] gi|300069820|gb|ADJ59220.1| prenyl transferase [Lactococcus lactis subsp. cremoris NZ9000] Length = 326 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 22/195 (11%) Query: 44 RYALLGGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++A GGK +R L A + + + +++ A++E +H +LIHDD+ +D+ + Sbjct: 39 KFASRGGKMVRPALFLLFAGIVPNGSKDEEKLIKIAASLEMLHSATLIHDDI--IDDSPL 96 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG P+V Q+ + A+ AG+ + T FE++ + + + N +S ++ Sbjct: 97 RRGMPSVESQFGKDVAVYAGDFVYTVYFELLIETMNGTSFVAKNAQS-----------MK 145 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214 +L G++ +Q F K KT L+ +C G A + + R G Sbjct: 146 RILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYFAGGDKKLQHSARKIG 205 Query: 215 ENLGIIFQLADDLLD 229 +G+ FQ+ DD+L+ Sbjct: 206 RAIGLAFQVYDDILN 220 >gi|172037378|ref|YP_001803879.1| solanesyl diphosphate synthase [Cyanothece sp. ATCC 51142] gi|171698832|gb|ACB51813.1| solanesyl diphosphate synthase [Cyanothece sp. ATCC 51142] Length = 327 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR LV+ L + R+ E IH SL+HDD+ +D +RR P Sbjct: 48 GGKRIRPAIVLLVSRATMLDSDITPRHRRLAEITEMIHTASLVHDDV--VDEAALRRNVP 105 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TV+ +D A++AG+ L + +++ + S+++ QG+ Sbjct: 106 TVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEIFQGINRFDTS 165 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D ++D++ KT +L+ + +S AI++ +S + L +G LG+ FQ+ D Sbjct: 166 LTLDAYLDKSY------YKTASLIANSAKSAAILSDSSTEVIDSLYAYGRYLGLAFQIVD 219 Query: 226 DLLD 229 D+LD Sbjct: 220 DILD 223 >gi|157413035|ref|YP_001483901.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9215] gi|157387610|gb|ABV50315.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9215] Length = 323 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 19/221 (8%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-LTAL- 73 ++ LDDL+L+ + + H +A GGK++R +V + + LT+ Sbjct: 11 VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFCLTSKH 70 Query: 74 -RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L A ++ Sbjct: 71 KRLAEITEMIHTASLVHDDV--VDEAATRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLA 128 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGAL 188 + DN+ +LS + + G++ + F D Q F I K KT +L Sbjct: 129 N-----LDNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFSKYINKSYCKTASL 178 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + +C++ +++ + L FG+N+G+ FQ+ DD+LD Sbjct: 179 IANSCKAAGVLSGINDENLTSLYEFGKNIGLAFQVVDDILD 219 >gi|16082302|ref|NP_394768.1| geranylgeranyl pyrophosphate synthase related protein [Thermoplasma acidophilum DSM 1728] gi|10640656|emb|CAC12434.1| geranylgeranyl pyrophosphate synthase related protein [Thermoplasma acidophilum] Length = 354 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/246 (28%), Positives = 108/246 (43%), Gaps = 33/246 (13%) Query: 6 PSKLQENSK-RIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECAS 63 P + N K RID + + + + + R++ IR Y GGK++R + Sbjct: 8 PHETINNYKLRIDERISRFFDRKEAETKDDLSRRVIRMIREYTEGGGKRLRPIFLVLGYR 67 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------------- 109 LF + +IE Y LIHDD+ +D+ +RRGKP++HI Sbjct: 68 LFADENNAIFDASISIELAQSYLLIHDDV--IDDSDLRRGKPSMHIRLWRSFFPESEKGK 125 Query: 110 QYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLS---LTHNIGLQGMLGGQML 165 + E AI+AG+ TYA E +I+S D S L+L+ LT I + G GQ L Sbjct: 126 KMGEGLAIVAGDLAETYAHESLINS------DFDPSLLLLADMELTKTIEMTGY--GQFL 177 Query: 166 DIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D+ ++ E + + KT + + ++ LR FG LGI FQ Sbjct: 178 DVVSGTLNDFRENDLIRLHLWKTARYTLEGPLAMGALLSGRHDQIMDLRLFGRTLGIAFQ 237 Query: 223 LADDLL 228 L DD+L Sbjct: 238 LKDDIL 243 >gi|292654483|ref|YP_003534380.1| farnesyl-pyrrophosphate synthase [Haloferax volcanii DS2] gi|291370065|gb|ADE02292.1| farnesyl-pyrrophosphate synthase [Haloferax volcanii DS2] Length = 280 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 16/220 (7%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 +R+ T+++D L + S ++ L + AL GGK++R + A+ Sbjct: 6 RRV-TMVNDRLEEVVSAVEPSELADQLDHV--ALAGGKRVRPAVTILACEAVGGTPEDAV 62 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +E +H SL+ DD+ +D IRRG P+ +Y AIIA +GLL AF ++SS Sbjct: 63 DFAVGVELVHNASLVVDDI--IDRSDIRRGTPSAWAEYGYGPAIIASDGLLGEAFALLSS 120 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + I ++ M+ L G+ ++ +E + + KTGAL A Sbjct: 121 SDRATR--IVAESMVELGE---------GEATELVAVPSNEAEYMQLAHRKTGALFRAAA 169 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 E GA+ A + E + +G+ FQ+ DD+LD D Sbjct: 170 ELGAVAASGDAHVVEAFGDYAARVGVAFQIRDDVLDATAD 209 >gi|205355397|ref|ZP_03222168.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346631|gb|EDZ33263.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8421] Length = 275 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 20/187 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GKK+RS L+ A + A ++ AAIE IH SL+HDD+ +D +RRG +V+ Sbjct: 7 SGKKLRSKLLLAIADESEI----AFKICAAIELIHLASLLHDDI--IDESELRRGARSVN 60 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-LDI 167 ++ A++ G+ L + AF +S + S+ + ++ +G M +D+ Sbjct: 61 AEFGTKNALMLGDILYSKAFYELSKMDARF---------TSIISDAVVKLAIGELMDVDL 111 Query: 168 QDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++F I++ + KT L+ + GAI+A + + +G+NLG+ FQ+ DD Sbjct: 112 GEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEKD---FAEYGKNLGLAFQMIDD 168 Query: 227 LLDCEED 233 +LD + D Sbjct: 169 ILDIKSD 175 >gi|320530437|ref|ZP_08031495.1| polyprenyl synthetase [Selenomonas artemidis F0399] gi|320137270|gb|EFW29194.1| polyprenyl synthetase [Selenomonas artemidis F0399] Length = 321 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 17/224 (7%) Query: 16 IDTILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRS---FLVTECASLFNVNH 69 D I +DL +L+ A + L+S I L+ GGK++R L + F+ + Sbjct: 2 FDVIEEDLTVLEAALEAALSSDSALVSDIGAHLVSSGGKRLRPALFLLAARAGADFDRDR 61 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A+ + A+E IH SL+HDD+ +D RRG T + ++ AI++G+ + AF+ Sbjct: 62 --AMPIAVALELIHTASLVHDDV--IDEADTRRGSATTNAKWGNQVAILSGDYIFARAFK 117 Query: 130 IISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 ++ +R + L+ +L+ LQ Q+ +D + + + KT Sbjct: 118 QVARVGYSSHIYMRLADLVCTLSEGEILQDHTVYQVPVSEDAYYERI------RKKTADF 171 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + CE GA + S + +G +G+ FQ+ DDLLD ++ Sbjct: 172 LEICCELGAGIGGMSAEDTANFARYGHAIGMAFQITDDLLDLQQ 215 >gi|195039199|ref|XP_001990881.1| GH19601 [Drosophila grimshawi] gi|193895077|gb|EDV93943.1| GH19601 [Drosophila grimshawi] Length = 449 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +IS ++ Sbjct: 204 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMISRLRSDDV 261 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + SQ++ L +Q LG + E +E + K KT +L+ A ++ A Sbjct: 262 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 313 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A N E +G N+G+ FQL DD+LD Sbjct: 314 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 345 >gi|146299544|ref|YP_001194135.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101] gi|146153962|gb|ABQ04816.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101] Length = 325 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 20/218 (9%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALLG--GKKIRS---FLVTECASLFNVNHLTALRVGAA 78 L + H LL+ I Y ++ GK++R FL + S VN T R + Sbjct: 17 LFEKKFHESMTSKVALLNRITYYIVNRKGKQMRPMFVFLTAKMVSGGTVNERT-YRGASV 75 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE IH +L+HDD+ +D+ RRG +++ + A++ G+ LL+ ++S Sbjct: 76 IELIHTATLVHDDV--VDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGL-LLSI----- 127 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACES 195 DN L+ ++ + ++ M G++L I+ I E + I + KT L+ C Sbjct: 128 -DNGDFDLLRIIS--VAVREMSEGELLQIEKARRLDITEDVYYEIIRKKTATLIAACCAL 184 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GA + E +R FGE +G+ FQ+ DDL D E+ Sbjct: 185 GAKAVIEDDVQVENMRMFGELIGMAFQIKDDLFDYSEE 222 >gi|229823651|ref|ZP_04449720.1| hypothetical protein GCWU000282_00952 [Catonella morbi ATCC 51271] gi|229786888|gb|EEP23002.1| hypothetical protein GCWU000282_00952 [Catonella morbi ATCC 51271] Length = 325 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 14/188 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK +R+ L A L + R + AAIE +H +LIHDD+ +D RRG +H Sbjct: 46 GKYLRAGLCLAMAQLTPEGITQSKRYIAAAIEVLHLATLIHDDV--IDEADTRRGIEALH 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 IQ AI AG+ L+TYA +I + + N + ++G+L G++ + Sbjct: 104 IQKSNRLAIYAGDYLMTYAARLIQKSQQEFDRNPLDAWV--------MEGILIGELNQLA 155 Query: 169 DEFIDETQVF-MIQKMKTGALMCFACESGAIMAHASQNEKERLRCF--GENLGIIFQLAD 225 +++ ++ +++++ + FA + SQ+ + + F G+ +G+ FQL D Sbjct: 156 NQYRQGMTMYDYLRQIRGKTALLFAAATFFGYYSLSQSALQNRQAFYLGQAIGMAFQLRD 215 Query: 226 DLLDCEED 233 DL+D + D Sbjct: 216 DLIDYQVD 223 >gi|218884766|ref|YP_002429148.1| Polyprenyl synthetase [Desulfurococcus kamchatkensis 1221n] gi|218766382|gb|ACL11781.1| Polyprenyl synthetase [Desulfurococcus kamchatkensis 1221n] Length = 353 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 102/232 (43%), Gaps = 35/232 (15%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL--VTECASLFNVNHL-TALRVGAAIE 80 L + AS + D + A Y L GGK++R+FL V + + L T V + IE Sbjct: 15 LREEASSVSPLTYDIIEIASDYTLRGGKRLRAFLALVGYWSREWGSGDLATITNVMSGIE 74 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVH---------------IQYDEVTAIIAGNGLLT 125 + Y LIHDD+ MD +RRG PTVH + Y + AI G+ L Sbjct: 75 LLQSYLLIHDDV--MDRDELRRGGPTVHAWFRDKCLKEMKGDCVHYGDSQAITVGDYLEA 132 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSL--THNIGLQGMLGGQMLDIQDE-----FIDETQVF 178 A E IS + N+ + + L T++ GL+ + GQ LD+ + E V Sbjct: 133 TAVEYIS------RANLPGETLRRLLETYSRGLRMVAYGQYLDVLLSNKPLGNVSERDVL 186 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLL 228 ++ +KT + ++A +EK L + GI FQL DD++ Sbjct: 187 LVHTLKTASYTIELPLHLGVIASGKYSEKILRELTSYAIPAGIAFQLRDDII 238 >gi|308051079|ref|YP_003914645.1| trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799] gi|307633269|gb|ADN77571.1| Trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799] Length = 322 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 12/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + +++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPLLAVLAARAVDYQGDDHVKLAAIIEFIHTATLLHDDV--VDESTMRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQMLD 166 + +++ G+ L T +F+++ T+LK R +++ L+ N+ +G + Q+++ Sbjct: 101 ALFGNQASVLVGDFLYTRSFQMM----TELK---RPRVLEDLADATNVLAEGEVL-QLMN 152 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D E + KT L A A++A + L +G LG FQL DD Sbjct: 153 CNDPNTTEESYMQVIYCKTARLFEAATHLAAVIADQPTEVCDALSDYGRYLGTAFQLVDD 212 Query: 227 LLDCEED 233 +LD D Sbjct: 213 VLDYTAD 219 >gi|226227338|ref|YP_002761444.1| polyprenyl synthase [Gemmatimonas aurantiaca T-27] gi|226090529|dbj|BAH38974.1| polyprenyl synthase [Gemmatimonas aurantiaca T-27] Length = 334 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 16/188 (8%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + GK R L+ +S+ + A+ A +E +H +L+HDD ++D+ +RRG PTV Sbjct: 54 MKGKLFRPTLLLLSSSIEGRSPKRAITFAAVVELMHLATLVHDD--AVDHSALRRGMPTV 111 Query: 108 HIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-QML 165 + + ++I G+ L A E+++ + D + M S+T N + LG + L Sbjct: 112 NSLFSHQVSVIMGDFLYLRALRELVT-----IGD---LEAMRSIT-NASNEMTLGEIRQL 162 Query: 166 DIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D E+ + + KT L AC+ GA+ + +E + FGE LG+ FQ+A Sbjct: 163 SAYDALAFGESDYETLIRAKTATLFMAACDVGAL--SGAPRYREAVTRFGERLGMAFQVA 220 Query: 225 DDLLDCEE 232 DDLLD E Sbjct: 221 DDLLDYTE 228 >gi|126695982|ref|YP_001090868.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9301] gi|126543025|gb|ABO17267.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9301] Length = 323 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 19/221 (8%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTA 72 ++ LDDL+L+ + + H +A GGK++R L+++ S Sbjct: 11 VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFCLTTKH 70 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L A ++ Sbjct: 71 KRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLA 128 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGAL 188 + DN+ +LS + + G++ + F D Q F I K KT +L Sbjct: 129 N-----LDNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFPKYINKSYCKTASL 178 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + +C++ +++ + L FG+N+G+ FQ+ DD+LD Sbjct: 179 IANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILD 219 >gi|260887775|ref|ZP_05899038.1| heptaprenyl diphosphate synthase component II [Selenomonas sputigena ATCC 35185] gi|330838673|ref|YP_004413253.1| Trans-hexaprenyltranstransferase [Selenomonas sputigena ATCC 35185] gi|260862451|gb|EEX76951.1| heptaprenyl diphosphate synthase component II [Selenomonas sputigena ATCC 35185] gi|329746437|gb|AEB99793.1| Trans-hexaprenyltranstransferase [Selenomonas sputigena ATCC 35185] Length = 324 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 14/185 (7%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L + F+ + L V A+E IH SL+HDD+ +D+ RRG Sbjct: 43 GGKRLRPALFLLAARSSKDFDAKKMMPLAV--ALELIHMASLVHDDV--LDHADTRRGAV 98 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQM 164 T + + AI++G+ AF +I + + R +QL++ L+ +Q Sbjct: 99 TANAMWGNQQAILSGDYFFARAFLLIVENGFGERVSGRVAQLIMDLSSGEIIQNK----- 153 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ D + + KT + CE GAI + + LR +G+ +G+ FQ+ Sbjct: 154 -ELYRASRDVEEYYERIAKKTANFLAICCELGAIATNLGAEAERGLRAYGKYVGMAFQIT 212 Query: 225 DDLLD 229 DDLLD Sbjct: 213 DDLLD 217 >gi|312115019|ref|YP_004012615.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311220148|gb|ADP71516.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 338 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + + A++E +H +L+HDD+ +D +RRGK + Sbjct: 57 GGKRLRPMLTIGAAKMCGYEGTGHIMLAASVEFMHTATLLHDDV--VDESDMRRGKKSAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + + + +LS ++ +G + Q+ + Sbjct: 115 MLWGNQASVLVGDFLLGQAFRMMVDVGS-----LGALKVLSEASSVIAEGEVW-QLAASK 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + KT AL A E GAI+ + E+ LR +G N+G+ FQL DD L Sbjct: 169 NLATTEEEYLNVIISKTAALFAAAAEIGAILTNRGPEEQAALRLYGTNIGLAFQLIDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|89890092|ref|ZP_01201603.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7] gi|89518365|gb|EAS21021.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7] Length = 325 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 18/186 (9%) Query: 50 GKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R V A + VN T R + IE IH +L+HDD+ +D+ RRG + Sbjct: 45 GKQMRPMFVFLVAKMIGDGEVNDRT-YRGASVIELIHTATLVHDDV--VDDSLKRRGFFS 101 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 V+ + A++ G+ LL+ ++S DN L+ ++ + ++ M G++L Sbjct: 102 VNALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLQIIS--VAVREMSEGELLQ 152 Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+ I E + I + KT L+ C GA + E++R FGE +GI FQ+ Sbjct: 153 IEKARRLDITEEVYYDIIRKKTATLIAACCSLGACAVSPGSQDVEKMREFGEMIGIAFQI 212 Query: 224 ADDLLD 229 DDL D Sbjct: 213 KDDLFD 218 >gi|42518501|ref|NP_964431.1| hypothetical protein LJ0408 [Lactobacillus johnsonii NCC 533] gi|41582786|gb|AAS08397.1| hypothetical protein LJ_0408 [Lactobacillus johnsonii NCC 533] Length = 350 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ +IE +H +LIHDD+ +D +R G+P++ +Y + A+ AG+ L + ++S Sbjct: 94 KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS- 150 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190 +N +S L + +Q +L G+ + + I E + K KTG L Sbjct: 151 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYKINISEKEYLDQIKGKTGVLFG 203 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AC GA + + + + FG+ LG FQL DD+LD Sbjct: 204 LACFIGAYESGLKVTKALKAKKFGDYLGQAFQLRDDILD 242 >gi|308499861|ref|XP_003112116.1| CRE-COQ-1 protein [Caenorhabditis remanei] gi|308268597|gb|EFP12550.1| CRE-COQ-1 protein [Caenorhabditis remanei] Length = 396 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 16/169 (9%) Query: 69 HLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 HLT ++G E IH SL+HDD+ +D RRG +V+ + +++ G+ +L Sbjct: 131 HLTVCQNQYKIGMIAEMIHTASLVHDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFIL 188 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM 183 A +I+ S K N+ S +M S+ ++ L + QM E + ++ I+K Sbjct: 189 ARATQILCSIG---KPNVIS-VMASIIEDLVLGEFM--QMSATPSEATPQQRMNAYIEKT 242 Query: 184 --KTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLD 229 KT +L +C S AI+A + N + +G NLGI FQLADDLLD Sbjct: 243 HRKTASLFASSCRSTAILADPNNLNLHQTAYEYGRNLGIAFQLADDLLD 291 >gi|296481448|gb|DAA23563.1| prenyl diphosphate synthase, subunit 1 [Bos taurus] Length = 418 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 22/199 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H A V A+ E IH SL+HDD+ +D+ RR Sbjct: 136 GKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLVHDDI--IDDASSRR 193 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ LG Sbjct: 194 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 251 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 252 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIA 305 Query: 221 FQLADDLLD---CEEDLPK 236 FQL DD+LD C E + K Sbjct: 306 FQLIDDVLDFTSCSEQMGK 324 >gi|297526316|ref|YP_003668340.1| Polyprenyl synthetase [Staphylothermus hellenicus DSM 12710] gi|297255232|gb|ADI31441.1| Polyprenyl synthetase [Staphylothermus hellenicus DSM 12710] Length = 365 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 49/226 (21%) Query: 45 YALLGGKKIRSFLV--------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 Y L GGK++R+FLV S+ +V +L A IE + Y L+HDD+ MD Sbjct: 47 YTLRGGKRLRAFLVLIGYWSRKWGYGSIDSVKYLMA-----GIEFLQSYLLVHDDI--MD 99 Query: 97 NGYIRRGKPTVHIQYDE----------------VTAIIAGNGLLTYA---FEIISSPKTQ 137 IRRG PTVH+ +D+ AII G+ L + A F ++ P Sbjct: 100 EDEIRRGGPTVHVWFDKKCREGGLIGRCKHYGVSQAIIVGDYLESLAVSMFTRLNLPDYA 159 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMC-F 191 LK+ I+ T+ G++ + GQ LD+ + + E V+ I +KT + Sbjct: 160 LKELIK-------TYTRGIRLVAYGQFLDVLIANTPLQKVSEDDVYNIHLLKTASYTVEL 212 Query: 192 ACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLPK 236 GAI + E L + GI FQL DD+L D PK Sbjct: 213 PLHLGAIASLMYDKELLTELSQYALPAGIAFQLQDDILGLYGD-PK 257 >gi|152990770|ref|YP_001356492.1| polyprenyl synthetase [Nitratiruptor sp. SB155-2] gi|151422631|dbj|BAF70135.1| polyprenyl synthetase [Nitratiruptor sp. SB155-2] Length = 296 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 24/218 (11%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78 +LD + ++ ++ + R+L R ++ GK +RS L+ A + H +A+ Sbjct: 1 MLDQVKMRMEQIVEDLQDKRVLEIYR-SIPMGKMLRSKLILNIAPVPEAIHTSAI----- 54 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQ 137 IE IH SL+HDD+ +D+ RRG P+V+ AI+ G+ L AF E+ S PKT Sbjct: 55 IELIHMASLLHDDV--IDDADTRRGNPSVNAVLGNKPAIMIGDILYAKAFYELSSLPKTL 112 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACES 195 + ++ +LSL G++ D++ F + + +M K A + A Sbjct: 113 AQTISQAVALLSL-----------GELKDVELSKSFQPDIEAYMDMIYKKTASLIEASAI 161 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A A+ S + + +G+ LG+ FQ+ DD+LD D Sbjct: 162 SA--AYLSGKDLKSYGEYGKKLGLAFQIVDDILDIISD 197 >gi|123965918|ref|YP_001010999.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9515] gi|123200284|gb|ABM71892.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9515] Length = 323 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 113/225 (50%), Gaps = 27/225 (12%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASL-FNVNHLT 71 ++ LDDL+L+ + + H +A GGK++R L+++ S FN+ Sbjct: 11 VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISRDFNLTT-K 69 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L A + Sbjct: 70 HKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHL 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGA 187 ++ DN++ +LS + + G++ + F D Q F I K KT + Sbjct: 128 ANL-----DNVKVVKLLSRV----IMDLAEGEIKQNLNRF-DSGQTFSKYINKSYCKTAS 177 Query: 188 LMCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLD 229 L+ + ++ ++++ E ++L C FG+N+G+ FQ+ DD+LD Sbjct: 178 LIANSTKAAGVLSNL---EDDKLNCLYEFGKNIGLAFQVVDDILD 219 >gi|168046685|ref|XP_001775803.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672810|gb|EDQ59342.1| predicted protein [Physcomitrella patens subsp. patens] Length = 344 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 33/251 (13%) Query: 1 MNGG---LPSKLQENSKR-------IDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL- 47 MNGG LPS + K ++ + DDL L + N L++A + Sbjct: 1 MNGGATSLPSTDKAEGKSKLTLADLVNPVSDDLRLLNDNLQKIVGADNPMLMAAAKQIFG 60 Query: 48 LGGKKIRS---FLVTECA-SLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 GGK++R FLV+ L N+ L R+ E IH SLIHDD+ +D R Sbjct: 61 AGGKRMRPALVFLVSRATCQLSNIQELRPQHRRLAEITEMIHTASLIHDDV--LDESDTR 118 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RGK TVH + A++AG+ + + ++ N+ + ++ L + ++ Sbjct: 119 RGKETVHQTFGTRVAVLAGDFMFAQSSWYLA--------NLDNLEVIKLISQV-IRDFAS 169 Query: 162 GQMLDIQDEFIDET--QVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 G++ Q+ F E Q ++ + KT +L+ + +S AI + ++ + + +G +LG Sbjct: 170 GEIKQAQNLFDTEVTLQNYLDKSYYKTASLIASSTKSAAIFSDSTPSVSNAMFDYGMHLG 229 Query: 219 IIFQLADDLLD 229 + FQ+ DD+LD Sbjct: 230 LAFQVVDDILD 240 >gi|147920444|ref|YP_001218859.1| polyprenyl synthetase [uncultured methanogenic archaeon RC-I] gi|116077941|emb|CAL59658.1| polyprenyl synthetase [uncultured methanogenic archaeon RC-I] Length = 289 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 14/182 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R + A L AL IECIH SLI DD+ +D G RRG+ T H Sbjct: 41 GKRLRPLTLLIMAELNGGTVEKALNAALGIECIHTASLIQDDI--LDEGLKRRGELTSHE 98 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 ++ A ++ + L++ A + S + + +GL+ + G++LDI+ Sbjct: 99 KFGIFIATVSADYLISRAVMLYSGYDAK---------SIEAFGRMGLE-LAEGEVLDIKT 148 Query: 170 EFIDETQVFMIQKMKTGALMCFAC--ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + + ++ ++ FA E GA +A S ++ E R GE GI +Q+ DDL Sbjct: 149 RRSKTDEAYYLECVRRKTATAFASCFEIGARIAGVSDDKAELCRKMGEEFGIAYQIVDDL 208 Query: 228 LD 229 ++ Sbjct: 209 IE 210 >gi|297570179|ref|YP_003691523.1| Trans-hexaprenyltranstransferase [Desulfurivibrio alkaliphilus AHT2] gi|296926094|gb|ADH86904.1| Trans-hexaprenyltranstransferase [Desulfurivibrio alkaliphilus AHT2] Length = 336 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 50/248 (20%) Query: 5 LPSKLQENSKRIDTIL-DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L +L +++I+ ++ DDL T N RL + + +ALL GGK+IR L A Sbjct: 6 LKQQLAAAAEQINQVIKDDLAAVT--------NPRLAAILEHALLAGGKRIRPLLTLLAA 57 Query: 63 SLF-------NVNHLTAL---RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112 L N TA ++ + E +H SL+HDD+ +D+ +RRG+ TV+ ++D Sbjct: 58 QLVQGHKGTENPQAGTATPWQQLAISFEYLHTASLLHDDV--IDHAALRRGRETVNTRWD 115 Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-EF 171 +AI+AG+ L + R+ L+ + ++G + D EF Sbjct: 116 NGSAILAGDFL-----------------HARALLLAGRAGGVPCLELIGTATQAMVDSEF 158 Query: 172 ID----------ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 I E F + KT AL+ ACE+G + A + ++ L +G NLG F Sbjct: 159 IQQEAAASRDWREETYFAVLDGKTAALIAAACEAGGVAAGGNPAQRRALHTYGGNLGRAF 218 Query: 222 QLADDLLD 229 Q+ DDLLD Sbjct: 219 QIIDDLLD 226 >gi|134101792|ref|YP_001107453.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133914415|emb|CAM04528.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 249 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 19/159 (11%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H +SL+HDD+ MD RR +PTV + AI+AG+ +L A I+S+ Sbjct: 1 MHNFSLLHDDV--MDGDLTRRHRPTVWSLFGTSNAILAGDAILGLAPRILSATG------ 52 Query: 142 IRSQLMLSLTHNIG--LQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFACE 194 S+ L+ G + + GQ DI F + V + + KTG L+ +C Sbjct: 53 --SEHALTAIDWFGKCVVKLCEGQAADIS--FSERVDVGIDACVAMARAKTGELLGTSCA 108 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 G + A A + + LR FG +G+ FQL DDLL D Sbjct: 109 LGGLFAGADRTQITALREFGSEIGLAFQLVDDLLGIWGD 147 >gi|328950331|ref|YP_004367666.1| Geranyltranstransferase [Marinithermus hydrothermalis DSM 14884] gi|328450655|gb|AEB11556.1| Geranyltranstransferase [Marinithermus hydrothermalis DSM 14884] Length = 319 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 17/185 (9%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR LV + +L V + + A+E +H +L+HDDL +D+ RRG+ Sbjct: 43 GGKRIRPRLVLLASRALGGVPR--EMELALAVELLHSATLLHDDL--VDDAETRRGREAA 98 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 +Y ++++G+ LL+ + L + R +L+ L ++ Q + G++ Sbjct: 99 FRKYGNAVSVLSGDYLLSRVLYL-------LAETGRLELV-RLFADVARQ-LAEGEVFQF 149 Query: 168 QDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q + E +++ KT ALM E A++A A+ +E LR FG G++FQ+ Sbjct: 150 QVAALGEYSKANYERIIAGKTAALMRACTEGVALLADAAPMVREALRRFGYEYGMVFQMR 209 Query: 225 DDLLD 229 DD LD Sbjct: 210 DDYLD 214 >gi|319900543|ref|YP_004160271.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108] gi|319415574|gb|ADV42685.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108] Length = 312 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 16/187 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A L+ L A+E +H SL+HDD+ +D RRG+ +V+ Sbjct: 33 GKMMRPMLVLLAAKLYGEICPATLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNA 90 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 ++ A+++G+ LL A + R+ ++ + +G Q + G++L + + Sbjct: 91 IFNNKVAVLSGDYLLATALVQVGLT--------RNHAIIDIVSCLG-QDLAEGELLQLSN 141 Query: 170 ----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +F ++ +I+K KT L ++GA+ A E R FGE +G+ FQ+ D Sbjct: 142 VSNLQFSEDIYFDVIRK-KTAVLFAACTKAGALSVGADGERAEFARLFGEYIGLCFQIKD 200 Query: 226 DLLDCEE 232 D+ D E Sbjct: 201 DIFDYFE 207 >gi|269217208|ref|ZP_06161062.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC 700122] gi|269129345|gb|EEZ60430.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC 700122] Length = 353 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 13/196 (6%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y+ GGK+ R + + A+ AAIE H +LIHDD+ D +RRG+ Sbjct: 60 YSRNGGKRHRPLICLAACVAVGGDVRRAVSSAAAIEHFHTAALIHDDI--ADEATLRRGE 117 Query: 105 PTVHIQYDEVTAIIAGN-GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 P +H+ AI G+ GL ++ P L+D ++ +++ L + + GQ Sbjct: 118 PCLHLTQGLGLAINMGDLGLSLVNGTVVRDP--LLEDGVKVRVIAELIEMT--RRTIEGQ 173 Query: 164 MLDI---QDEFIDET-QVFMIQKMKTGALMCFACE--SGAIMAHASQNEKERLRCFGENL 217 LD+ +DE D T + +++ A A GAI+ S+ E E LR +G + Sbjct: 174 ALDLGWARDERYDITPEDYLVMATHKTAHYSGAVPLAVGAIVGGGSEAEIEGLRAYGLDT 233 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DDLL+ E D Sbjct: 234 GLAFQIQDDLLNIEGD 249 >gi|242216194|ref|XP_002473906.1| predicted protein [Postia placenta Mad-698-R] gi|220726932|gb|EED80866.1| predicted protein [Postia placenta Mad-698-R] Length = 258 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 27/166 (16%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH SL+HDD+ +D +RRG P+ + + I+AG+ LL A S+ ++L DN Sbjct: 2 IHVASLLHDDV--IDKSPLRRGVPSAPLAFGNKLTILAGDFLLGRA----STTLSRLGDN 55 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--------------MKTGA 187 +L+ S+ N ++ G++L ++ +E + +Q +KT + Sbjct: 56 EVVELIASVIAN-----LVEGEILQLKSVHAEELGLGGVQSVGAENFNIYLQKTYLKTAS 110 Query: 188 LMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDCE 231 LM + ++ + E KE +G NLGI FQL DD+LD E Sbjct: 111 LMAKGARAAVVLGGCKEGEVWKEIAYAYGRNLGIAFQLVDDILDYE 156 >gi|33865545|ref|NP_897104.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. WH 8102] gi|33632714|emb|CAE07526.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. WH 8102] Length = 323 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 19/226 (8%) Query: 9 LQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 LQ ++T+L DL L+ + + L SA GGK++R +V + + Sbjct: 8 LQPVETDLETLLGDLRSLIGAGHPILQAAAEHLFSA------GGKRLRPGIVLLLSRALS 61 Query: 67 VN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + LT R+ E IH SL+HDD+ +D RRG TVH ++D A++AG+ L Sbjct: 62 ADGQLTPRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFDARVAVLAGDFL 119 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 A +++ + S++++ L QG+ + +++++ Sbjct: 120 FAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFRFDTAQSFETYLEKSYC------ 173 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + + +++ S +E + L FG LG+ FQ+ DD+LD Sbjct: 174 KTASLIANSARAAGVLSDCSPSELDGLYRFGRQLGLAFQVVDDILD 219 >gi|323448786|gb|EGB04680.1| hypothetical protein AURANDRAFT_55083 [Aureococcus anophagefferens] Length = 341 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 88/159 (55%), Gaps = 17/159 (10%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE +H SL HDD+ +D RRG P+V ++ + AI+AG+ LL A ++ +L Sbjct: 170 IEIVHTASLFHDDV--IDGADTRRGCPSVSAKFGDKVAILAGDFLLARACVALA----KL 223 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFM---IQKM--KTGALMCFA 192 ++ +L+ ++ ++ ++ G+++ ++ E +T + +QK KTG+LM A Sbjct: 224 ENLAVVELI-----SVVIEHLVRGEIIQMRPESGTSDTHALLEAYLQKTFYKTGSLMANA 278 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 C + A++ +Q + +G ++G+ FQL DD+LD E Sbjct: 279 CRAAALLEDETQANCDAAFAYGRHVGLAFQLVDDILDFE 317 >gi|321470026|gb|EFX81004.1| hypothetical protein DAPPUDRAFT_318059 [Daphnia pulex] Length = 391 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 32/196 (16%) Query: 50 GKKIRSFLVTECASLFNVNHL---------TALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 GK IR + A N HL +++ +E IH SL+HDD+ +D Sbjct: 108 GKAIRPVITLLMAKAINY-HLGENSRNVVEKQMKIAQIVEMIHTASLVHDDV--VDAADS 164 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RR K +V+ + + +I+AGN ++ + EI ++ I S +L+L I ++ Sbjct: 165 RRNKSSVNKVWGQKKSILAGNYVVGRSIEICTA--------IESHEVLNLITKI-FSELI 215 Query: 161 GGQMLDI-----QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCF 213 G+++ + ++E+ D ++K KT +L+ C++ +++A AS + F Sbjct: 216 SGELMQLDGTANKEEWFDH----YLEKTFKKTASLIANGCQAVSVVAGASSATQTNAFQF 271 Query: 214 GENLGIIFQLADDLLD 229 G LG+ FQL DDLLD Sbjct: 272 GRQLGMAFQLVDDLLD 287 >gi|81301171|ref|YP_401379.1| trans-hexaprenyltranstransferase [Synechococcus elongatus PCC 7942] gi|81170052|gb|ABB58392.1| Trans-hexaprenyltranstransferase [Synechococcus elongatus PCC 7942] Length = 323 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 19/188 (10%) Query: 49 GGKKIRSFLV------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R +V T H R+ E IH SL+HDD+ +D +RR Sbjct: 44 GGKRLRPAVVLLLSRATMPGQEITPRHR---RLAEITEMIHTASLVHDDV--VDESSLRR 98 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM-LG 161 G PTVH + A++AG+ L A ++ + + SQ+++ L LQG+ Sbjct: 99 GIPTVHSSFSNRVAVLAGDFLFAQASWHLAHLDSLTVVKLLSQVIMDLAEGEILQGLNRF 158 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 L I+ ++D++ KT +L+ + + +++ +S+ + L +G +LG+ F Sbjct: 159 DSSLSIE-VYLDKSY------YKTASLLANSARAAGVLSGSSETVCDALYDYGRSLGLAF 211 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 212 QIVDDILD 219 >gi|154152049|ref|NP_001093801.1| decaprenyl-diphosphate synthase subunit 1 [Bos taurus] gi|151556844|gb|AAI49262.1| PDSS1 protein [Bos taurus] Length = 418 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 22/199 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H A V A+ E IH SL+HDD+ +D+ RR Sbjct: 136 GKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLVHDDI--IDDASSRR 193 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ LG Sbjct: 194 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 251 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 252 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIA 305 Query: 221 FQLADDLLD---CEEDLPK 236 FQL DD+LD C E + K Sbjct: 306 FQLIDDVLDFTSCSEQMGK 324 >gi|332521667|ref|ZP_08398120.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4] gi|332042756|gb|EGI78956.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4] Length = 300 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 18/186 (9%) Query: 50 GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R FLV + S V T R + IE IH +L+HDD+ +D+ RRG + Sbjct: 20 GKQMRPMFVFLVAKMVSNGEVKERT-YRGASVIELIHTATLVHDDV--VDDSNKRRGFFS 76 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ + A++ G+ LL+ ++S DN L+ ++ + ++ M G++L Sbjct: 77 INALWKNKIAVLIGDYLLSKGL-LLSI------DNEDFDLLKIIS--VAVREMSEGELLQ 127 Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+ I ET + I + KT L+ C GA + E E +R FGE +G+ FQ+ Sbjct: 128 IEKARKLDITETIYYEIIRQKTATLIAACCSLGAASVKPNTLEVETMRKFGELIGMAFQI 187 Query: 224 ADDLLD 229 DDL D Sbjct: 188 KDDLFD 193 >gi|91070262|gb|ABE11181.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone HF10-11H7] Length = 323 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 19/221 (8%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTA 72 ++ LDDL+L+ + + H +A GGK++R L+++ S Sbjct: 11 VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFCLTTKH 70 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L A ++ Sbjct: 71 KRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLA 128 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGAL 188 + DN+ +LS + + G++ + F D Q F I K KT +L Sbjct: 129 N-----LDNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFSKYINKSYCKTASL 178 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + +C++ +++ + L FG+N+G+ FQ+ DD+LD Sbjct: 179 IANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILD 219 >gi|260799425|ref|XP_002594697.1| hypothetical protein BRAFLDRAFT_240454 [Branchiostoma floridae] gi|229279933|gb|EEN50708.1| hypothetical protein BRAFLDRAFT_240454 [Branchiostoma floridae] Length = 328 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 18/161 (11%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D RRGK V + + AI+ G+ +LT +SS Sbjct: 77 RISMIAEMIHTASLVHDDV--IDEADTRRGKACVSYLHGQRKAILTGDYILT-----VSS 129 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKM--KTGAL 188 N ++LS ++ ++ G+ + + +DE DE ++K KT +L Sbjct: 130 MALAAIGNKDVVILLSQV----IEDLVRGEFMQLGTKEDE--DERFAHYLKKTFKKTASL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + +C + A+++ +S++ +E +G+NLGI FQL DD+LD Sbjct: 184 LAHSCRAVAVLSGSSKDVQEVAYQYGKNLGIAFQLVDDMLD 224 >gi|289581060|ref|YP_003479526.1| polyprenyl synthetase [Natrialba magadii ATCC 43099] gi|289530613|gb|ADD04964.1| Polyprenyl synthetase [Natrialba magadii ATCC 43099] Length = 280 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 13/184 (7%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK++R + A+ G IE +H SL+ DD+ +D +RRG + Sbjct: 36 LSGGKRVRPMVTILACETVGGTAEDAVEFGVGIELVHNASLVIDDI--IDRSELRRGTES 93 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ AII +GLL AF++ +S ++ S + L + L M Sbjct: 94 AWAEFGYGPAIITSDGLLGEAFDLFASDPDAMRVVTESMVELGVGEATELSAMPS----- 148 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 +E + + + KTGAL A E GAI A + E L + E +GI FQ+ DD Sbjct: 149 ------NEEEYMTLARRKTGALFRAAAELGAIAADSDAVTVEALGEYAERVGIAFQIRDD 202 Query: 227 LLDC 230 +LD Sbjct: 203 VLDA 206 >gi|195341723|ref|XP_002037455.1| GM12094 [Drosophila sechellia] gi|194131571|gb|EDW53614.1| GM12094 [Drosophila sechellia] Length = 461 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +I+ ++ Sbjct: 191 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 248 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + SQ++ L +Q LG + E +E + K KT +L+ A ++ A Sbjct: 249 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 300 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A N E +G N+G+ FQL DD+LD Sbjct: 301 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 332 >gi|225461848|ref|XP_002285665.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 421 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 23/226 (10%) Query: 16 IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNVN 68 + + DDL L Q + N L+SA GGK++R FLV+ A + + Sbjct: 103 FEVVADDLQILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLK 162 Query: 69 HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 LT R+ IE IH SLIHDD+ +D +RRGK TVH Y A++AG+ + Sbjct: 163 DLTIKHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHQLYGTRVAVLAGDFMFAQ 220 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183 + ++ N+ + ++ L + ++ G++ F ++ + + Sbjct: 221 SSWYLA--------NLENLEVIKLISQV-IKDFASGEIKQASSLFDCELELEEYLLKSFY 271 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + + AI + N E++ +G NLG+ FQ+ DD+LD Sbjct: 272 KTASLIAASTKGAAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILD 317 >gi|147844134|emb|CAN80568.1| hypothetical protein VITISV_004505 [Vitis vinifera] Length = 421 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 23/226 (10%) Query: 16 IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNVN 68 + + DDL L Q + N L+SA GGK++R FLV+ A + + Sbjct: 103 FEVVADDLQILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLK 162 Query: 69 HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 LT R+ IE IH SLIHDD+ +D +RRGK TVH Y A++AG+ + Sbjct: 163 DLTIKHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHQLYGTRVAVLAGDFMFAQ 220 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183 + ++ N+ + ++ L + ++ G++ F ++ + + Sbjct: 221 SSWYLA--------NLENLEVIKLISQV-IKDFASGEIKQASSLFDCELELEEYLLKSFY 271 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + + AI + N E++ +G NLG+ FQ+ DD+LD Sbjct: 272 KTASLIAASTKGAAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILD 317 >gi|323143046|ref|ZP_08077750.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei YIT 12066] gi|322417147|gb|EFY07777.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei YIT 12066] Length = 323 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 18/192 (9%) Query: 49 GGKKIRSFLVTECASL---FNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R LV + L + TA+ ++ A +E +H +LIHDD+ +DN +RRG+ Sbjct: 43 GGKRMRPALVLLASHLLPSYTDEEETAVCKLAAGVELLHTATLIHDDV--IDNSLMRRGR 100 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 PT++ A++AG+ + T F I +++ +LS+ + L ++ G++ Sbjct: 101 PTLNSTSGNHVAVLAGDYMFTRCFATIK--------DLKKADVLSIISDT-LATLVTGEL 151 Query: 165 LDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 +++E I + KTGAL + + A+ + L+ +G LG F Sbjct: 152 DQLKNEGDVNISVEDYYTTIYCKTGALFELSASAPAVYLGEEEKYITALKNYGRYLGNAF 211 Query: 222 QLADDLLDCEED 233 Q+ DD LD D Sbjct: 212 QIIDDCLDYSSD 223 >gi|302142790|emb|CBI20085.3| unnamed protein product [Vitis vinifera] Length = 420 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 23/226 (10%) Query: 16 IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNVN 68 + + DDL L Q + N L+SA GGK++R FLV+ A + + Sbjct: 102 FEVVADDLQILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLK 161 Query: 69 HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 LT R+ IE IH SLIHDD+ +D +RRGK TVH Y A++AG+ + Sbjct: 162 DLTIKHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHQLYGTRVAVLAGDFMFAQ 219 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183 + ++ N+ + ++ L + ++ G++ F ++ + + Sbjct: 220 SSWYLA--------NLENLEVIKLISQV-IKDFASGEIKQASSLFDCELELEEYLLKSFY 270 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + + AI + N E++ +G NLG+ FQ+ DD+LD Sbjct: 271 KTASLIAASTKGAAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILD 316 >gi|28198534|ref|NP_778848.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1] gi|71274823|ref|ZP_00651111.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon] gi|71902480|ref|ZP_00684417.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1] gi|170729932|ref|YP_001775365.1| trans-hexaprenyltranstransferase [Xylella fastidiosa M12] gi|182681213|ref|YP_001829373.1| polyprenyl synthetase [Xylella fastidiosa M23] gi|28056618|gb|AAO28497.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1] gi|71164555|gb|EAO14269.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon] gi|71727796|gb|EAO30052.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1] gi|167964725|gb|ACA11735.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa M12] gi|182631323|gb|ACB92099.1| Polyprenyl synthetase [Xylella fastidiosa M23] Length = 333 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L ++ A IE IH +L+HDD+ +D +RR + T + Sbjct: 54 GGKRLRPMLTMLAGHAIGPTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSRSTAN 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ T+L + Q++ T+ I +L Q+L + Sbjct: 112 ALWGNAPSVLVGDFLYSRSFQLM----TELANLEVMQILAETTNRISEGEVL--QLLHVH 165 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DET + + KT L A + GA+ +HA + R+ +G LG FQ+ DD+L Sbjct: 166 NPDTDETTYLSVIERKTAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVL 225 Query: 229 D 229 D Sbjct: 226 D 226 >gi|218708400|ref|YP_002416021.1| octaprenyl-diphosphate synthase [Vibrio splendidus LGP32] gi|218321419|emb|CAV17369.1| Octaprenyl-diphosphate synthase [Vibrio splendidus LGP32] Length = 323 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 110/224 (49%), Gaps = 12/224 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNVNH 69 K I T+ + + + +Q Q N L++ + + ++ GGK++R L A Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F+ Sbjct: 64 EAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQ 121 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++++ + +R ++S + N+ +G + Q+++ + E + KT L Sbjct: 122 MMTTLGS-----LRILELMSESVNVIAEGEVQ-QLMNCNNPDTTEESYMQVIYSKTARLF 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GAI+ +S + ++ +G+ LG FQL DD++D D Sbjct: 176 EAATQIGAILTESSPEIETAMQNYGKYLGTAFQLIDDVMDYTAD 219 >gi|123968209|ref|YP_001009067.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. AS9601] gi|123198319|gb|ABM69960.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. AS9601] Length = 323 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 19/221 (8%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTA 72 ++ LDDL+L+ + + H +A GGK++R L+++ S Sbjct: 11 VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFCLTTKH 70 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L A ++ Sbjct: 71 KRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLA 128 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGAL 188 + DN+ +LS + + G++ + F D Q F I K KT +L Sbjct: 129 N-----LDNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFSKYINKSYCKTASL 178 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + +C++ +++ + L FG+N+G+ FQ+ DD+LD Sbjct: 179 IANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILD 219 >gi|78184893|ref|YP_377328.1| trans-hexaprenyltranstransferase [Synechococcus sp. CC9902] gi|78169187|gb|ABB26284.1| Trans-hexaprenyltranstransferase [Synechococcus sp. CC9902] Length = 323 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR +V + + LT R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRIRPGIVLLISRALAADGELTPRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH ++D A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFDARVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLY---RF 158 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D F ET F KT +L+ + + +++ + E + L FG LG+ FQ+ D Sbjct: 159 DTSQSF--ET-YFEKSYCKTASLIANSSRAAGVLSECNPQELDSLYQFGRQLGLAFQVVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|309790120|ref|ZP_07684693.1| polyprenyl synthetase [Oscillochloris trichoides DG6] gi|308227845|gb|EFO81500.1| polyprenyl synthetase [Oscillochloris trichoides DG6] Length = 358 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 10/165 (6%) Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + ++H+ + A+ E IH SL+HDDL +D RRG+ TVH ++D A++ G+ Sbjct: 98 YQLSHV--IHAAASAELIHAASLVHDDL--VDQAARRRGRVTVHARWDNDVALMVGD--- 150 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 F ++S + L + R + + ++G L M+ E Q F K Sbjct: 151 --YFFALASAEMSLSPDPRIITFYAQAVQVIVEGELSPVMVAEPAE-TARRQYFYKTGAK 207 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T L AC++G + + L +G ++G+ FQ+ DD+LD Sbjct: 208 TAVLFEAACKAGMAAGGGDEAQIAALAGYGFDVGVAFQIVDDVLD 252 >gi|290968407|ref|ZP_06559947.1| polyprenyl synthetase [Megasphaera genomosp. type_1 str. 28L] gi|290781594|gb|EFD94182.1| polyprenyl synthetase [Megasphaera genomosp. type_1 str. 28L] Length = 337 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 21/188 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GK IR LV S F + A + A IE H SLIHDD+ +D +RRGKP Sbjct: 55 GKMIRPRLVIMAGS-FGKRYAEAEERLYKAAALIEMTHSASLIHDDI--VDEAPLRRGKP 111 Query: 106 TVHIQYDEVTAIIAGNGLLTY-AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 +V +Y + A+ AG+ L++ + ++ Q S ++L+ ++ M G++ Sbjct: 112 SVQRRYGKSAAVYAGDFLMSRITYHLMQEGLMQ------SGMVLAKA----VEAMCAGEI 161 Query: 165 LDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + D T +Q + KT AL AC GA+ + ++ RL GE LG +F Sbjct: 162 TQALCRYRADVTLAEYLQNIYGKTVALFRAACRMGALESGCDESLIRRLENVGEALGYMF 221 Query: 222 QLADDLLD 229 Q+ DDLLD Sbjct: 222 QMRDDLLD 229 >gi|242091495|ref|XP_002441580.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor] gi|241946865|gb|EES20010.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor] Length = 406 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ A L ++ LT R+ IE IH SLIHDD+ +D+ +RR Sbjct: 124 GGKRLRPALVFLVSRATAELAALSELTTEHQRLAEIIEMIHTASLIHDDV--IDDSGMRR 181 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK T+H Y A++AG+ + + ++ N+ + ++ L + ++ G Sbjct: 182 GKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------NLENIEVIKLISQV-IKDFASG 232 Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ F + + KT +L+ + S AI + E++ +G NLG+ Sbjct: 233 EIKQASTLFDCDVTLDDYLLKSYYKTASLIAASTRSAAIFSGMDTTICEQMYEYGRNLGL 292 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 293 SFQVVDDILD 302 >gi|15672163|ref|NP_266337.1| prenyl transferase [Lactococcus lactis subsp. lactis Il1403] gi|12723034|gb|AAK04279.1|AE006256_1 prenyl transferase [Lactococcus lactis subsp. lactis Il1403] Length = 326 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 22/195 (11%) Query: 44 RYALLGGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++A GGK +R L A + + + +++ A++E +H +LIHDD+ +D+ + Sbjct: 39 KFASRGGKMVRPALFLLFAGIVPNGSKDEEKIIKIAASLEMLHSATLIHDDI--IDDSPL 96 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG P++ Q+ + A+ AG+ + T FE++ + + + N +S ++ Sbjct: 97 RRGLPSIESQFGKDVAVYAGDFVYTVYFELLIETMNGTSFVAKNAQS-----------MK 145 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214 +L G++ +Q F K KT L+ +C G A + + R G Sbjct: 146 KILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYFAGGDKKLQHSARKIG 205 Query: 215 ENLGIIFQLADDLLD 229 +G+ FQ+ DD+L+ Sbjct: 206 RAIGLAFQVYDDILN 220 >gi|281490672|ref|YP_003352652.1| polyprenyl synthetase [Lactococcus lactis subsp. lactis KF147] gi|281374441|gb|ADA63962.1| Polyprenyl synthetase [Lactococcus lactis subsp. lactis KF147] Length = 326 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 22/195 (11%) Query: 44 RYALLGGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++A GGK +R L A + + + +++ A++E +H +LIHDD+ +D+ + Sbjct: 39 KFASRGGKMVRPALFLLFAGIVPNGSKDEEKLIKIAASLEMLHSATLIHDDI--IDDSPL 96 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG P++ Q+ + A+ AG+ + T FE++ + + + N +S ++ Sbjct: 97 RRGLPSIESQFGKDVAVYAGDFVYTVYFELLIETMNGTSFVAKNAQS-----------MK 145 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214 +L G++ +Q F K KT L+ +C G A + + R G Sbjct: 146 KILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYFAGGDKKLQHSARKIG 205 Query: 215 ENLGIIFQLADDLLD 229 +G+ FQ+ DD+L+ Sbjct: 206 RAIGLAFQVYDDILN 220 >gi|157127995|ref|XP_001661265.1| trans-prenyltransferase [Aedes aegypti] gi|108882325|gb|EAT46550.1| trans-prenyltransferase [Aedes aegypti] Length = 249 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 8/150 (5%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D + RRGKP+V++ ++ AG+ +L A +++ K Sbjct: 4 EMIHTASLVHDDV--IDQSFARRGKPSVNVIWNHKKVTQAGDYVLAVASMLLARLKHDEV 61 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 +I SQ++ L +Q LG + + ++E F KT +L+ + ++ A++ Sbjct: 62 THILSQVLTDLVQGEFMQ--LGSK--ETENERF--AHYFTKTYRKTASLIANSLKAVAVL 115 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A + E +G NLG+ FQ DDLLD Sbjct: 116 SGADEQMVELSFQYGRNLGLAFQFVDDLLD 145 >gi|326405759|gb|ADZ62830.1| polyprenyl transferase [Lactococcus lactis subsp. lactis CV56] Length = 326 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 22/195 (11%) Query: 44 RYALLGGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 ++A GGK +R L A + + + +++ A++E +H +LIHDD+ +D+ + Sbjct: 39 KFASRGGKMVRPALFLLFAGIVPNGSKDEEKLIKIAASLEMLHSATLIHDDI--IDDSPL 96 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG P++ Q+ + A+ AG+ + T FE++ + + + N +S ++ Sbjct: 97 RRGLPSIESQFGKDVAVYAGDFVYTVYFELLIETMNGTSFVAKNAQS-----------MK 145 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214 +L G++ +Q F K KT L+ +C G A + + R G Sbjct: 146 KILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYFAGGDKKLQHSARKIG 205 Query: 215 ENLGIIFQLADDLLD 229 +G+ FQ+ DD+L+ Sbjct: 206 RAIGLAFQVYDDILN 220 >gi|170695309|ref|ZP_02886455.1| Polyprenyl synthetase [Burkholderia graminis C4D1M] gi|170139709|gb|EDT07891.1| Polyprenyl synthetase [Burkholderia graminis C4D1M] Length = 330 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPALLLLVAGALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ +R +L+ NI +G + Q+L++ Sbjct: 109 ALFGNAASVLVGDFLYSRSFQMMVGVG-----KMRVMEILAEATNIISEGEVL-QLLNMH 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A + GA++A A + FG +G FQ+ DD L Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGADARIEAAAAEFGRRIGTAFQIMDDWL 222 Query: 229 D 229 D Sbjct: 223 D 223 >gi|302537967|ref|ZP_07290309.1| polyprenyl diphosphate synthase [Streptomyces sp. C] gi|302446862|gb|EFL18678.1| polyprenyl diphosphate synthase [Streptomyces sp. C] Length = 326 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 35 GGKAVRPALALLSAEAAGAAAEVGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 92 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A E++ T +L + + ++ GQ DI Sbjct: 93 KVHGPALAILVGDALFALANEVLLELGTVEAGRATRRLTTAS------RKLIDGQAQDIS 146 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ + GA++ A ++L +G +LG+ FQ D Sbjct: 147 YEHRERVSVQECLEMEGNKTGALLACSVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVD 206 Query: 226 DLL 228 DLL Sbjct: 207 DLL 209 >gi|195575272|ref|XP_002105603.1| GD16491 [Drosophila simulans] gi|194201530|gb|EDX15106.1| GD16491 [Drosophila simulans] Length = 461 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +I+ ++ Sbjct: 191 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 248 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + SQ++ L +Q LG + E +E + K KT +L+ A ++ A Sbjct: 249 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 300 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A N E +G N+G+ FQL DD+LD Sbjct: 301 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 332 >gi|186682243|ref|YP_001865439.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102] gi|186464695|gb|ACC80496.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102] Length = 323 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L++ L R+ E IH SL+HDD+ +D +RRG P Sbjct: 44 GGKRIRPAIVLLISRATMLEQDITPRHRRLAEITEMIHTASLVHDDV--VDESDVRRGVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH + AI+AG+ L + +++ + S++++ L QG L Sbjct: 102 TVHSLFGNRIAILAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLATGEIQQG------L 155 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D I KT +L+ + ++ +++ S+ E L +G + GI FQ+ D Sbjct: 156 NRFDAGISIETYLQKSYYKTASLIANSSKAAGLLSEVSRETVEHLYSYGRHFGIAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|330508568|ref|YP_004384996.1| polyprenyl synthetase [Methanosaeta concilii GP-6] gi|328929376|gb|AEB69178.1| polyprenyl synthetase [Methanosaeta concilii GP-6] Length = 311 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 13/178 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R ++ A ++ AIE +H SL+HDD+ +D+G RRG P+ Sbjct: 39 GKRVRPLILILSAEALGTPPAQSISAALAIELVHAASLVHDDI--LDHGIERRGSPSALE 96 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 ++ +++AG+ L++ + ++IS + IR+ + M G+++D+ Sbjct: 97 RFGPEASLLAGDWLISRSIDLISGYSQPV---IRA-------FSRACMDMSEGELMDLSC 146 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 E I + KT +L + + G +++ A + + RL +G +LG+ +Q+ DDL Sbjct: 147 AGSPEDYYQCITR-KTASLFSASAKIGGLISGAGEEDVARLESYGLHLGLGYQVLDDL 203 >gi|260436153|ref|ZP_05790123.1| solanesyl diphosphate synthase [Synechococcus sp. WH 8109] gi|260414027|gb|EEX07323.1| solanesyl diphosphate synthase [Synechococcus sp. WH 8109] Length = 323 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 91/184 (49%), Gaps = 11/184 (5%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +V + + L+ R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLLSRALSAQGELSPRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH ++D A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFDARVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLYRFDTA 161 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +++++ KT +L+ +C + +++ S ++ + L FG LG+ FQ+ D Sbjct: 162 QTFETYLEKSYC------KTASLIANSCRAAGVLSGCSPSQLDSLYQFGRQLGLAFQVVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|167752314|ref|ZP_02424441.1| hypothetical protein ALIPUT_00558 [Alistipes putredinis DSM 17216] gi|167660555|gb|EDS04685.1| hypothetical protein ALIPUT_00558 [Alistipes putredinis DSM 17216] Length = 329 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 24/196 (12%) Query: 45 YALLG-GKKIRSFLVTECASLF-----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 YAL GK IR V A+L L AL +E IH SLIHDD+ +D Sbjct: 39 YALSARGKGIRPMTVLLSAALNAPAGQRSGGLRALLAATLVEMIHVASLIHDDV--IDES 96 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRG+ +V+ ++ A++ G+ +L ++ ++S +TH G Sbjct: 97 DMRRGRASVNARWQSRNAVVVGDYILAKNMDL----------GLKSGQFDLVTHVCGAIA 146 Query: 159 ML-GGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 L G++L + E + + +I K KT L+ + +GA+ AS+ ++ +R F Sbjct: 147 TLCEGEILQNDKANRQEMTRASYLDIIYK-KTACLIGVSASAGALAVGASREKQALMRKF 205 Query: 214 GENLGIIFQLADDLLD 229 GE++G+ FQ+ DD+LD Sbjct: 206 GESIGMAFQIQDDILD 221 >gi|296120422|ref|YP_003628200.1| trans-hexaprenyltranstransferase [Planctomyces limnophilus DSM 3776] gi|296012762|gb|ADG66001.1| Trans-hexaprenyltranstransferase [Planctomyces limnophilus DSM 3776] Length = 338 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 17/197 (8%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L A R+ GK++R LV A + T + A +E IH +L+HDD+ + Sbjct: 49 KDILQHATRFR---GKRLRPILVLLSARACGEVNETHRLLAAVVEMIHIATLVHDDV--L 103 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D RR TV+ +++ T+++ G+ L T+AF + S +L + +++ T+ + Sbjct: 104 DEASTRRHVATVNARWNNETSVLFGDYLFTHAFHLAS----ELPTSHACRIIGRATNKV- 158 Query: 156 LQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G++ I + ++E F I KT L + GA A + Sbjct: 159 ----CEGELTQIHERGNLDLNEETYFKIINGKTAELTAVSAYLGAHYADQPAEVVNAVEA 214 Query: 213 FGENLGIIFQLADDLLD 229 +G LG+ FQ+ADDLLD Sbjct: 215 YGRKLGLAFQIADDLLD 231 >gi|332879986|ref|ZP_08447670.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681982|gb|EGJ54895.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 326 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 21/204 (10%) Query: 39 LLSAIRYALLG--GKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPS 94 LL+ I Y ++ GK++R + A + + +T R + IE IH +L+HDD+ Sbjct: 32 LLNRITYYIVNRKGKQMRPMFIFLVAKMLSGGKVTERTYRGASVIELIHTATLVHDDV-- 89 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +D+ RRG +++ + A++ G+ LL+ ++S DN L+ ++ + Sbjct: 90 VDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLRIIS--V 140 Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGA--IMAHASQNEKER 209 ++ M G++L ++ I E + + + KT L+ C GA +M +A + E+ Sbjct: 141 AVREMSEGELLQMEKARRLDIVEEVYYEVIRQKTATLIAACCAMGACSVMPNAPE-LIEK 199 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 +R FGE +G+ FQ+ DDL D ED Sbjct: 200 MRLFGEYIGMAFQIKDDLFDYTED 223 >gi|297563981|ref|YP_003682954.1| Trans-hexaprenyltranstransferase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848430|gb|ADH70448.1| Trans-hexaprenyltranstransferase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 334 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 36/240 (15%) Query: 1 MNGGLPSKLQENSKRIDTIL-------DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKI 53 ++ L ++Q+N ++++ +L D LL + ASH LL+A GGK+ Sbjct: 15 VDDALAREVQDNLEKVEDLLRESVASSDPLLTEAASH--------LLAA------GGKRF 60 Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113 R+ LV A + + + A +E H +L HDD+ MD +RRG+P+ + ++ Sbjct: 61 RATLVLLAAHFGDPSVPDLIPAAAVVELTHVATLYHDDV--MDEAELRRGEPSANQRWGN 118 Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEF 171 AI+ G+ + A E+++ T+ +R Q ++ GQ+L+ E Sbjct: 119 SVAILTGDYVFARASEMLADLGTE---AVRLQATT-------FGRLVQGQILETSGPQEG 168 Query: 172 IDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 D ++ + KT +L+ + E G + + + LG+ FQLADDLLD Sbjct: 169 TDPLDHYLRVISDKTASLIASSAEFGGMFGKVDPETIGTVTRACDALGMAFQLADDLLDV 228 >gi|270001562|gb|EEZ98009.1| hypothetical protein TcasGA2_TC000408 [Tribolium castaneum] Length = 339 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 21/209 (10%) Query: 32 QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN-------HLTALRVGAAI-ECI 82 ++ + D L Y G GK IR + A N + LT+ R A I E I Sbjct: 37 RSTYQDDLYEIATYYFDGHGKAIRPMVAILMARAINYHIYKEKSGLLTSQREVAMISEMI 96 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H SL+HDD+ +D RRGKP+V++ ++ +AG+ +L A +I+ K + Sbjct: 97 HTASLVHDDV--IDQSDFRRGKPSVNVMWNHKKVTMAGDFILAVASIMIARLKNNDVTLV 154 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMA 200 SQ++ L +Q LG + E +E + K KT +L+ + +S ++A Sbjct: 155 LSQVVSDLVQGEFMQ--LGSK------ETENERFAHYLTKTYRKTASLIANSVKSVTMLA 206 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229 A + + +G NLG+ FQL DDLLD Sbjct: 207 GADEQLSDISYQYGRNLGLAFQLVDDLLD 235 >gi|225851044|ref|YP_002731278.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1] gi|225645501|gb|ACO03687.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1] Length = 320 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV + L N + A+E +H SL+HDD+ +D RRGK Sbjct: 38 GGKRLRPVLVLTFSKLLKGENEERDYPIAVAMEYLHTASLLHDDV--VDGAETRRGKAAA 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + T ++ G+ + A + S + + + + ++ M GQ+L++ Sbjct: 96 NRVFGNDTTVLTGDYMYANALYLFS---------VYGDIDMIRNVSDAVKKMSEGQLLEL 146 Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D + E F I + KT L C G + S +K+ +G ++GI FQL Sbjct: 147 KKIGDIDMREEDYFRILEGKTAVLFGSCCYVGTALGGGSDKQKKSAYNYGLSIGIAFQLI 206 Query: 225 DDLLD 229 DDLLD Sbjct: 207 DDLLD 211 >gi|24651612|ref|NP_733425.1| CG31005 [Drosophila melanogaster] gi|23172761|gb|AAF57135.2| CG31005 [Drosophila melanogaster] gi|201065485|gb|ACH92152.1| FI02023p [Drosophila melanogaster] Length = 436 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +I+ ++ Sbjct: 191 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 248 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + SQ++ L +Q LG + E +E + K KT +L+ A ++ A Sbjct: 249 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 300 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A N E +G N+G+ FQL DD+LD Sbjct: 301 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 332 >gi|194336606|ref|YP_002018400.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|194309083|gb|ACF43783.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 324 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 26/196 (13%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IR +V A L + ++ R +E +H +LIHDD+ +D +RRG +++ Sbjct: 44 GKQIRPAMVLLAAQLCGGVNESSYRAAIMVELLHSATLIHDDV--VDGAEMRRGLASINA 101 Query: 110 QYDEVTAIIAGNGLLT----YAFEIISSPKTQLKDNIRSQLMLSLTHNI--GLQGMLGGQ 163 + +++ G+ LL+ Y+ E KD H + ++ M G+ Sbjct: 102 LWKNKISVLIGDYLLSKGLLYSLE--------YKD-------YGFLHMVSEAVRRMSEGE 146 Query: 164 MLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + IQ I E + KT +L+ AC GA+ A + L+ +GE LG+ Sbjct: 147 IFQIQKTRSLDISEADYLSVIADKTASLISSACAMGAMSATTDEVRIAALKSYGEYLGLA 206 Query: 221 FQLADDLLDCEEDLPK 236 FQ+ DDLLD D K Sbjct: 207 FQIRDDLLDYTGDSKK 222 >gi|288917197|ref|ZP_06411566.1| Trans-hexaprenyltranstransferase [Frankia sp. EUN1f] gi|288351388|gb|EFC85596.1| Trans-hexaprenyltranstransferase [Frankia sp. EUN1f] Length = 338 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 15/184 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R +V A + + AIE H +L HDD+ MD +RRG + + Sbjct: 54 GGKRFRPMVVLLAAQFADPEAAGVVPAAVAIELTHLSTLYHDDV--MDEAPLRRGAASAN 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ AI+ G+ L A EI + ++ + L I + GQ+ + Sbjct: 112 ARWTNTVAILTGDFLFARASEITA--------DLGPEATRILARTIAT--LCEGQIRETV 161 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + Q+ + KT +L+ + GA++A A + + L FGE G+ FQL+D Sbjct: 162 GPGPGQNQIEHYLRVITDKTASLIATSGRLGAMLAGADRVTADVLAAFGERFGVAFQLSD 221 Query: 226 DLLD 229 D++D Sbjct: 222 DIID 225 >gi|307150008|ref|YP_003885392.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822] gi|306980236|gb|ADN12117.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822] Length = 323 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 11/184 (5%) Query: 49 GGKKIRSFLV--TECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR LV A++ + + R A I E IH SL+HDD+ +D +RR P Sbjct: 44 GGKRIRPALVLLVSRATMLDQDITPRHRRLAEITEMIHTASLVHDDV--VDEAELRRNVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TV+ +D A++AG+ L + +++ DN+ +LS +G + Q + Sbjct: 102 TVNSLFDNRIAVLAGDFLFAQSSWYLAN-----LDNLEVVKLLSEVIRDFAEGEIQ-QGI 155 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ D I KT +LM + ++ A+++ + E L +G LG+ FQ+ D Sbjct: 156 NLFDTGITLEAYLEKSYYKTASLMANSAKAAAVLSDVPREVTEHLYNYGRYLGLAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|168019710|ref|XP_001762387.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686465|gb|EDQ72854.1| predicted protein [Physcomitrella patens subsp. patens] Length = 356 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 20/190 (10%) Query: 49 GGKKIRS---FLVTECA-SLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R FLV+ L N+ L R+ E IH SLIHDD+ +D RR Sbjct: 74 GGKRMRPALVFLVSRATCQLSNIQELRPQHRRLAEITEMIHTASLIHDDV--LDESDTRR 131 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TVH + A++AG+ + + ++ N+ + ++ L + ++ G Sbjct: 132 GKETVHQTFGTRVAVLAGDFMFAQSSWYLA--------NLDNLEVIKLISQV-IRDFASG 182 Query: 163 QMLDIQDEFIDET--QVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++ Q+ F E Q ++ + KT +L+ + +S AI + ++ + ++ +G +LG+ Sbjct: 183 EIKQAQNLFDTEVTLQNYLDKSYYKTASLIASSTKSAAIFSDSTSSVSNQMFDYGMHLGL 242 Query: 220 IFQLADDLLD 229 FQ+ DD+LD Sbjct: 243 AFQVVDDILD 252 >gi|34541591|ref|NP_906070.1| polyprenyl synthetase [Porphyromonas gingivalis W83] gi|34397908|gb|AAQ66969.1| polyprenyl synthetase [Porphyromonas gingivalis W83] Length = 292 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 13/183 (7%) Query: 50 GKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK +R L A++ + T L +E IH +LIHDD+ +D RRG PT++ Sbjct: 13 GKHVRPLLTGLVAAVCAGKTNSTTLEAAVLLEMIHTATLIHDDV--IDMASTRRGVPTLN 70 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-QMLDI 167 +D A++ G+ +L+ A + ++IR ++++ +G + G + + Sbjct: 71 AFFDNRVAVLMGDFVLSSAL-----MRAIALNDIR---IITIISRLGRELSEGEIRQFET 122 Query: 168 QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D+ I + ++M + + KT L E GAI A ER++ GE LG FQ+ DD Sbjct: 123 ADKVIIDEDIYMGVIRQKTAMLFSACAEVGAITVQAPVEIVERVKRVGELLGYAFQIRDD 182 Query: 227 LLD 229 + D Sbjct: 183 IFD 185 >gi|282162726|ref|YP_003355111.1| polyprenyl synthetase [Methanocella paludicola SANAE] gi|282155040|dbj|BAI60128.1| polyprenyl synthetase [Methanocella paludicola SANAE] Length = 285 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 24/205 (11%) Query: 37 DRLLSA-----IRYAL-----LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86 DR++SA IR ++ GK++R V A + A A+ECIH S Sbjct: 15 DRIISAVELPEIRMSIAHSLKTAGKRLRPVSVLLLAEMNGGRADDATDAALAMECIHTAS 74 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 LI DD+ +D G RRG+ T H ++ A+++G+ L++ A ++S K + ++ L Sbjct: 75 LIQDDI--VDEGLKRRGEDTSHEKFGMFLAMVSGDYLISRAMMLMS------KYDEKTIL 126 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQ 204 S GL M G++LD++ T+ ++ + KT + + E GA +A A + Sbjct: 127 AFS---KAGLY-MAEGELLDVKSRKYKPTEADYVECVRKKTAIMFESSFEMGARIAGADE 182 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 E R G GI +Q+ DDL++ Sbjct: 183 KHAELCRLMGMEFGIAYQIVDDLIE 207 >gi|16329171|ref|NP_439899.1| solanesyl diphosphate synthase [Synechocystis sp. PCC 6803] gi|15214189|sp|P72580|PREA_SYNY3 RecName: Full=Prenyl transferase gi|14595182|dbj|BAA16579.2| solanesyl diphosphate synthase [Synechocystis sp. PCC 6803] Length = 323 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 100/188 (53%), Gaps = 19/188 (10%) Query: 49 GGKKIRS--FLVTECASLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R L+ A+L + LTA R+ E IH SL+HDD+ +D +RR Sbjct: 44 GGKRVRPAIVLLVSRATLLD-QELTARHRRLAEITEMIHTASLVHDDV--VDEADLRRNV 100 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 PTV+ +D A++AG+ L + +++ DN+ +LS ++ G++ Sbjct: 101 PTVNSLFDNRVAVLAGDFLFAQSSWYLAN-----LDNLEVVKLLSEV----IRDFAEGEI 151 Query: 165 LDIQDEFIDETQV-FMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 L + F +T + ++K KT +L+ + ++ +++ A ++ + L +G++LG+ F Sbjct: 152 LQSINRFDTDTDLETYLEKSYFKTASLIANSAKAAGVLSDAPRDVCDHLYEYGKHLGLAF 211 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 212 QIVDDILD 219 >gi|114778283|ref|ZP_01453142.1| octaprenyl-diphosphate synthase [Mariprofundus ferrooxydans PV-1] gi|114551385|gb|EAU53941.1| octaprenyl-diphosphate synthase [Mariprofundus ferrooxydans PV-1] Length = 325 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 16/211 (7%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+ T H Q + ++ AI + ++ GGK++R L A LF + + +E Sbjct: 18 LVDTCIHENLQSDIMMIPAIGHYIVNSGGKRLRPLLTLLTARLFGYQGKRHVPLSVVVEF 77 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH SL+HDD+ +D+ RRG P+ + + +++ G+ L + AF+++ S D Sbjct: 78 IHTASLLHDDV--VDSSDQRRGAPSANGVWGNQASVLVGDYLFSRAFQMMVSD----GDM 131 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI 198 + +LM +T+ + G++L + F + E + + + KT L A E GA Sbjct: 132 VMLKLMSDVTNALA-----EGEVLQLSRTFHLEMTEAECLEVIERKTAVLFKAATEVGAH 186 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +A S + +G LG+ FQL DD LD Sbjct: 187 VAGQSAQTIAAMAEYGMCLGVAFQLMDDALD 217 >gi|295677741|ref|YP_003606265.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002] gi|295437584|gb|ADG16754.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002] Length = 330 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 8/155 (5%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F+++ Sbjct: 77 LAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGV 134 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 +R +LS NI +G + Q+L++ D +DE + + + KT L A + Sbjct: 135 G-----KMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIRYKTAKLFEAAAQ 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA++A A + +G +G FQ+ DD LD Sbjct: 189 LGAVLAGADAKTEAAAAEYGRRIGTAFQIMDDWLD 223 >gi|241664241|ref|YP_002982601.1| polyprenyl synthetase [Ralstonia pickettii 12D] gi|240866268|gb|ACS63929.1| Polyprenyl synthetase [Ralstonia pickettii 12D] Length = 325 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 46 GGKRLRPVILLLVANALGYKGEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTAN 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ +++R +L+ NI +G + Q+L++ Sbjct: 104 AVFGNAASVLVGDFLYSRAFQMMVQA-----NSMRIMQILADATNIISEGEVL-QLLNMH 157 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + + KT L A + GA+++ A +E +G +G FQ+ DDLL Sbjct: 158 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGAGAAIEEAAAEYGRRIGTAFQIIDDLL 217 Query: 229 D 229 D Sbjct: 218 D 218 >gi|257456101|ref|ZP_05621302.1| polyprenyl synthetase family protein [Treponema vincentii ATCC 35580] gi|257446487|gb|EEV21529.1| polyprenyl synthetase family protein [Treponema vincentii ATCC 35580] Length = 334 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 13/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R L L + + IE IH SLIHDD+ DN +RRG+P H Sbjct: 48 GGKRWRPLLAVLAYQLAGGSGEEIYTLTPLIEGIHTASLIHDDIE--DNSELRRGQPAAH 105 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDI 167 + Y +A+ +G+ L A + + + N++ L + LTH ++ + GQ LDI Sbjct: 106 VAYGLDSALNSGSWLYFQALGSLEAYRAPA--NVKLDLYAAALTH---IRALHEGQALDI 160 Query: 168 QDE-----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 F + ++KTGAL A +G A + E E G+ FQ Sbjct: 161 HWHRTAGFFPSRKDYERMIRLKTGALAALAAYTGMRAAGKAHEESAAFASLFEAAGVGFQ 220 Query: 223 LADD 226 + DD Sbjct: 221 ILDD 224 >gi|161525972|ref|YP_001580984.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616] gi|189349309|ref|YP_001944937.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC 17616] gi|221213256|ref|ZP_03586231.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD1] gi|160343401|gb|ABX16487.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616] gi|189333331|dbj|BAG42401.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC 17616] gi|221166708|gb|EED99179.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD1] Length = 331 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 52 GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRETAN 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DET+ + + KT L + GA++A A + +G +G FQ+ DD L Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 223 Query: 229 D 229 D Sbjct: 224 D 224 >gi|221202398|ref|ZP_03575430.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD2M] gi|221208142|ref|ZP_03581147.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD2] gi|221172045|gb|EEE04487.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD2] gi|221177675|gb|EEE10090.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Burkholderia multivorans CGD2M] Length = 331 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 52 GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRETAN 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ L + +FE+ + K ++ D +LS I +G + Q+L++ Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVGKMRVMD------ILSEATTIISEGEVL-QLLNM 162 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D +DET+ + + KT L + GA++A A + +G +G FQ+ DD Sbjct: 163 HDADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDW 222 Query: 228 LD 229 LD Sbjct: 223 LD 224 >gi|15837992|ref|NP_298680.1| octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c] gi|9106399|gb|AAF84200.1|AE003970_7 octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c] Length = 332 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L ++ A IE IH +L+HDD+ +D +RR + T + Sbjct: 53 GGKRLRPMLTMLAGHAIGPTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSRSTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ T+L + Q++ T+ I +L Q+L + Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----TELANLEVMQILAETTNRISEGEVL--QLLHVH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DET + + KT L A + GA+ +HA + R+ +G LG FQ+ DD+L Sbjct: 165 NPDTDETTYLRVIERKTAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|312131592|ref|YP_003998932.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132] gi|311908138|gb|ADQ18579.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132] Length = 324 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 14/187 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IR V A + R A IE +H +L+HDD+ +D RRG +V+ Sbjct: 46 GKQIRPMFVFLTAGALGGIKESTYRGAALIELLHTATLVHDDV--VDEANYRRGFFSVNA 103 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ LL ++S +L + + ++ M G++L I+ Sbjct: 104 LWKNKIAVLVGDYLLAKGL-LLSVENEDFN-------LLKIV-STAVREMSEGELLQIEK 154 Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 I E + + + KT L+ C GA A + E E+ R GE +G+ FQ+ DD Sbjct: 155 ARKLDITEEVYYEVIRQKTATLIAACCAVGAASADRTPEEVEKARLLGEKIGMAFQIKDD 214 Query: 227 LLDCEED 233 L D D Sbjct: 215 LFDFGTD 221 >gi|195505401|ref|XP_002099488.1| GE23324 [Drosophila yakuba] gi|194185589|gb|EDW99200.1| GE23324 [Drosophila yakuba] Length = 470 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +I+ ++ Sbjct: 225 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 282 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + SQ++ L +Q LG + E +E + K KT +L+ A ++ A Sbjct: 283 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 334 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A N E +G N+G+ FQL DD+LD Sbjct: 335 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 366 >gi|261404272|ref|YP_003240513.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10] gi|261280735|gb|ACX62706.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10] Length = 334 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 11/190 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R +V + H A ++ +E +H SL+HDD+ +D +RRG PT+ Sbjct: 45 GGKRLRPLMVVLGSRFGESGHEPAVMKTAVLLEYLHMASLVHDDI--IDQSDMRRGMPTL 102 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-----G 162 H D TA+ GN ++ A E + D + + + L G Sbjct: 103 HETTDVQTAVHIGNYMIARAIEWAAGHPGGDPDGNSEDVSEDEAYRLAELAALVTELCMG 162 Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + +Q F + Q + KT LM ++GA AHA ERL FGE+LG+ Sbjct: 163 EYDQLQHRFDFGLTMEQYLEKTRCKTALLMAHCLKAGAEAAHADAGTAERLFQFGESLGM 222 Query: 220 IFQLADDLLD 229 FQ+ DDLLD Sbjct: 223 AFQIRDDLLD 232 >gi|307579659|gb|ADN63628.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 309 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L ++ A IE IH +L+HDD+ +D +RR + T + Sbjct: 30 GGKRLRPMLTMLAGHAIGPTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSRSTAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ T+L + Q++ T+ I +L Q+L + Sbjct: 88 ALWGNAPSVLVGDFLYSRSFQLM----TELANLEVMQILAETTNRISEGEVL--QLLHVH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DET + + KT L A + GA+ +HA + R+ +G LG FQ+ DD+L Sbjct: 142 NPDTDETTYLSVIERKTAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVL 201 Query: 229 D 229 D Sbjct: 202 D 202 >gi|238927608|ref|ZP_04659368.1| trans-hexaprenyltranstransferase [Selenomonas flueggei ATCC 43531] gi|238884533|gb|EEQ48171.1| trans-hexaprenyltranstransferase [Selenomonas flueggei ATCC 43531] Length = 321 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 21/197 (10%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L A + + A+ V A+E IH SL+HDD+ +D RRG T Sbjct: 38 GGKRLRPALFLLAARGGASFDRARAMPVAVALELIHTASLVHDDV--IDEADTRRGAETT 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI++G+ + AF++++ ++ S + + L H + + G++L Sbjct: 96 NAKWGNQVAILSGDYIFARAFKLVA------EEGYDSSVYVKLAHLVCT--LSEGEIL-- 145 Query: 168 QDEFI-----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 QD + E + + KT + CE G + S + ++ +G +G+ FQ Sbjct: 146 QDHTVYQIPTSEHAYYERIRKKTADFLEICCELGGFIGGMSPADTAQMAEYGHAIGMAFQ 205 Query: 223 LADDLLD---CEEDLPK 236 + DDLLD ED+ K Sbjct: 206 ITDDLLDFRRSSEDIGK 222 >gi|194741958|ref|XP_001953476.1| GF17201 [Drosophila ananassae] gi|190626513|gb|EDV42037.1| GF17201 [Drosophila ananassae] Length = 441 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +I+ ++ Sbjct: 196 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSVASIMIARLRSDDV 253 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + SQ++ L +Q LG + E +E + K KT +L+ A ++ A Sbjct: 254 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 305 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A N E +G N+G+ FQL DD+LD Sbjct: 306 VIAQAEDNVAELAFQYGRNIGLAFQLVDDMLD 337 >gi|194904996|ref|XP_001981099.1| GG11874 [Drosophila erecta] gi|190655737|gb|EDV52969.1| GG11874 [Drosophila erecta] Length = 436 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +I+ ++ Sbjct: 191 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 248 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + SQ++ L +Q LG + E +E + K KT +L+ A ++ A Sbjct: 249 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 300 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A N E +G N+G+ FQL DD+LD Sbjct: 301 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 332 >gi|254253318|ref|ZP_04946636.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158] gi|124895927|gb|EAY69807.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158] gi|325528031|gb|EGD05253.1| polyprenyl synthetase [Burkholderia sp. TJI49] Length = 331 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 52 GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DET+ + + KT L + GA++A A + +G +G FQ+ DD L Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 223 Query: 229 D 229 D Sbjct: 224 D 224 >gi|257388648|ref|YP_003178421.1| polyprenyl synthetase [Halomicrobium mukohataei DSM 12286] gi|257170955|gb|ACV48714.1| Polyprenyl synthetase [Halomicrobium mukohataei DSM 12286] Length = 344 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 39/226 (17%) Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIR-SFLVTECASLFNV---------------NHLTA 72 + + L A RY + GGK++R + L+ SL +V + + Sbjct: 25 ELPVDEPEELYEASRYLMDAGGKRLRPTMLLLAAESLADVAPQSTDYRSFPTVEGDEIDV 84 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +R IE I ++LIH MD+ +RRG P VH +YD TAI+AG+ L + AFE + Sbjct: 85 MRAAVGIETIQSFTLIH--DDIMDDDDLRRGVPAVHREYDLSTAILAGDTLFSKAFEYML 142 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---------DEFIDETQVFMIQKM 183 + + ++ + L+ T + GQ DI DE++D M++ + Sbjct: 143 DTGAKAERSVAATKRLAQTCT----EICEGQSFDIDFESRAEVTTDEYLD-----MVE-L 192 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L + A + A ++ E L +G ++G FQ+ DDLLD Sbjct: 193 KTAVLYAASASIPAQLMGA-EDAVEPLYGYGLDVGRAFQIQDDLLD 237 >gi|147920348|ref|YP_685879.1| putative polyprenyl synthetase [uncultured methanogenic archaeon RC-I] gi|110621275|emb|CAJ36553.1| putative polyprenyl synthetase [uncultured methanogenic archaeon RC-I] Length = 340 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 19/196 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++RS + + AL AA+E +H +SLIHDD+ D RR +PTV Sbjct: 55 GGKQLRSTMCLLACEAISGKFDNALPGAAAVELVHNFSLIHDDIEDGDE--TRRHRPTVW 112 Query: 109 IQYDEVTAIIAGNGLLTYAF----EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + AI G+ + ++ E+ P+T +K +L + ++ +Q + GQ Sbjct: 113 KLWGVPQAINTGDAMDVVSYIAILELKVKPETMIK-------VLRVFNDTIMQ-LCEGQY 164 Query: 165 LDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 LD+ + E + MI KT AL+ + GA+ A Q + + FG +GI Sbjct: 165 LDMDFQTRKTVTVEEYIEMITG-KTAALIEASTAIGAMAATDDQKVIDHFKAFGHKIGIG 223 Query: 221 FQLADDLLDCEEDLPK 236 FQ+ DDLL D K Sbjct: 224 FQIQDDLLGIWGDPSK 239 >gi|313891223|ref|ZP_07824842.1| polyprenyl synthetase [Streptococcus pseudoporcinus SPIN 20026] gi|313120586|gb|EFR43706.1| polyprenyl synthetase [Streptococcus pseudoporcinus SPIN 20026] Length = 326 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 45/228 (19%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 +Q ++ D + ++ A GGK +R FL T N ++ A++E +H +L Sbjct: 26 VQARNTDIQEAIVQLAQAGGKYLRPAFFFLFTSFGQREKQNSEQLTKIAASLEILHMATL 85 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-----SSPKTQLKDNI 142 IHDD+ +D+ +RRG+ T+ Q+ + A+ G+ L T FE+I SP +K N Sbjct: 86 IHDDV--IDDSPLRRGQVTIQTQFGKDIAVYTGDFLFTIFFELILETMQDSP--YMKVNA 141 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-----------KTGALMCF 191 ++ ++ +L G++ D+ ++ QK KT L Sbjct: 142 KA-----------MKKILVGEL--------DQMHLYFNQKQSIRDYLRSISGKTAELFRL 182 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A GA AS + G ++G+ FQ+ DD+LD E+D K Sbjct: 183 ASSEGAYFGGASPEVVSKAGRIGYHIGMTFQILDDILDYTAKEKDFNK 230 >gi|15606228|ref|NP_213606.1| octoprenyl-diphosphate synthase [Aquifex aeolicus VF5] gi|2983415|gb|AAC06998.1| octoprenyl-diphosphate synthase [Aquifex aeolicus VF5] Length = 304 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 16/190 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + AL +G A+E IH SL+HDD+ +D RRG+ + + Sbjct: 33 GGKRLRPLFTLLVSGMCGGDPSKALPLGVALEYIHVASLLHDDV--VDRAKTRRGRESAN 90 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + A++ G+ + + + S+ + M+ L + + M GQ+L+I Sbjct: 91 LVFGNGVAVLTGDYMYAKSLHLFST--------YGNMEMIRLVSGV-VMDMAEGQVLEIS 141 Query: 169 D--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + I E + F I KTG L AC M+ + +E L G LG FQL DD Sbjct: 142 KVGDIISEEEYFQIIDGKTGVLFG-ACFGVGAMSGECGDWRE-LYEAGLRLGRAFQLIDD 199 Query: 227 LLDCEEDLPK 236 LD E D PK Sbjct: 200 ALDYEGD-PK 208 >gi|115350537|ref|YP_772376.1| trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD] gi|170699961|ref|ZP_02890988.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10] gi|172059569|ref|YP_001807221.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6] gi|115280525|gb|ABI86042.1| Trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD] gi|170135109|gb|EDT03410.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10] gi|171992086|gb|ACB63005.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6] Length = 331 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 52 GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DET+ + + KT L + GA++A A + +G +G FQ+ DD L Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 223 Query: 229 D 229 D Sbjct: 224 D 224 >gi|315638153|ref|ZP_07893335.1| octaprenyl-diphosphate synthase [Campylobacter upsaliensis JV21] gi|315481689|gb|EFU72311.1| octaprenyl-diphosphate synthase [Campylobacter upsaliensis JV21] Length = 297 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 22/187 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GKK+RS L+ A A + A IE IH SL+HDD+ +D +RRG +++ Sbjct: 30 GKKLRSKLLLSIAG----ESQKAYVLCAIIELIHLASLLHDDI--IDESELRRGARSINA 83 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 ++ A++ G+ L + AF +S + ++ SQ++ + + + G+++D+ Sbjct: 84 EFGAKNALMLGDILYSKAFYELSKQEAKI-----SQILSNAVCKLAI-----GELMDVNL 133 Query: 169 -DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 EF + + ++ KT L+ + GA++A +N +G+NLG+ FQ+ DD Sbjct: 134 SKEFNPDKEAYLTMIYHKTAVLIEASARCGALLAKLDEN---AFAKYGKNLGLAFQIVDD 190 Query: 227 LLDCEED 233 +LD D Sbjct: 191 ILDITGD 197 >gi|78065141|ref|YP_367910.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383] gi|77965886|gb|ABB07266.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383] Length = 331 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 52 GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DET+ + + KT L + GA++A A + +G +G FQ+ DD L Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 223 Query: 229 D 229 D Sbjct: 224 D 224 >gi|34557907|ref|NP_907722.1| polyprenyl synthetase ) [Wolinella succinogenes DSM 1740] gi|34483625|emb|CAE10622.1| POLYPRENYL SYNTHETASE ) [Wolinella succinogenes] Length = 300 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 30/223 (13%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 +RI+ + + LL+ S Q + L S GK +RS L+ A +L Sbjct: 5 ERIEARVKEWLLEVGSKEALQMSQSLSS--------GKMLRSKLILAIAG----ESEESL 52 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + AA+E I SL+HDD+ +D+ + RRGKP+++ + AI+ G+ + AF ++ Sbjct: 53 SLCAAVELIQSASLLHDDV--IDDAFTRRGKPSINAAFGNKNAIMLGDIFYSKAFFELT- 109 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM-IQKMKTGALMC 190 R +++ T + + + G++ D+ F E ++M + + KT +L+ Sbjct: 110 ---------RFSPLIARTVSHAVVRLSLGELADVTLAQTFNLEEHLYMQMIEDKTASLIE 160 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A ++ A++ + E R +G+NLG+ FQ+ DDLLD +D Sbjct: 161 AAAQAAALLV---SRDSEAFRIYGKNLGLAFQIIDDLLDITQD 200 >gi|195158222|ref|XP_002019991.1| GL13744 [Drosophila persimilis] gi|194116760|gb|EDW38803.1| GL13744 [Drosophila persimilis] Length = 445 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +I+ ++ Sbjct: 200 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 257 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + SQ++ L +Q LG + E +E + K KT +L+ A ++ A Sbjct: 258 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 309 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A N E +G N+G+ FQL DD+LD Sbjct: 310 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 341 >gi|154174404|ref|YP_001408390.1| prenyl transferase [Campylobacter curvus 525.92] gi|112802622|gb|EAT99966.1| prenyl transferase [Campylobacter curvus 525.92] Length = 297 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 14/158 (8%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 LR+ A IE IH SL+HDD+ +D+ RRGKP+++ + +I+ G+ + F ++ Sbjct: 49 LRLCAIIELIHLASLLHDDV--IDDADTRRGKPSINALFGTKNSIMLGDIFYSKGFFELA 106 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCF 191 + NI ++L+ + + ++ +D+ + F D+ Q +M + KT L+ Sbjct: 107 ----KFSPNI-ARLVSEAVSKLSIGELMD---VDLSENFNDDKQKYMDMIYYKTAVLIEA 158 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GAI+A + + R +G+NLG+ FQ+ DD+LD Sbjct: 159 TAACGAILAGLDET---KFRIYGKNLGLAFQIIDDVLD 193 >gi|171316229|ref|ZP_02905452.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5] gi|171098643|gb|EDT43440.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5] Length = 331 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 52 GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DET+ + + KT L + GA++A A + +G +G FQ+ DD L Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 223 Query: 229 D 229 D Sbjct: 224 D 224 >gi|107021658|ref|YP_619985.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054] gi|116688604|ref|YP_834227.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424] gi|170731903|ref|YP_001763850.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3] gi|105891847|gb|ABF75012.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054] gi|116646693|gb|ABK07334.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424] gi|169815145|gb|ACA89728.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3] Length = 331 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 52 GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DET+ + + KT L + GA++A A + +G +G FQ+ DD L Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 223 Query: 229 D 229 D Sbjct: 224 D 224 >gi|198450324|ref|XP_001357936.2| GA15930 [Drosophila pseudoobscura pseudoobscura] gi|198130986|gb|EAL27072.2| GA15930 [Drosophila pseudoobscura pseudoobscura] Length = 445 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +I+ ++ Sbjct: 200 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 257 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + SQ++ L +Q LG + E +E + K KT +L+ A ++ A Sbjct: 258 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 309 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A N E +G N+G+ FQL DD+LD Sbjct: 310 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 341 >gi|170119528|ref|XP_001890894.1| predicted protein [Laccaria bicolor S238N-H82] gi|164634032|gb|EDQ98458.1| predicted protein [Laccaria bicolor S238N-H82] Length = 240 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 19/150 (12%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H SL+HDD+ +D +RRG P+ ++ +++ GN +L A S+ +L D Sbjct: 2 LHTASLLHDDV--IDASPLRRGAPSAPSKFGSKLSVLGGNFILGRA----STALARLGDA 55 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +QL+ S+ N ++ G++L ++D+ +T M + ++ A++ CE G + Sbjct: 56 EVTQLIASVISN-----LVEGEILQMRDKTYLKTASLMAKGARS-AVVLGGCEEGEVW-- 107 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCE 231 K+ +G N+GI FQL DD+LD E Sbjct: 108 -----KDIAYAYGRNVGIAFQLIDDILDYE 132 >gi|149173800|ref|ZP_01852429.1| polyprenyl synthase [Planctomyces maris DSM 8797] gi|148847330|gb|EDL61664.1| polyprenyl synthase [Planctomyces maris DSM 8797] Length = 330 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 14/177 (7%) Query: 50 GKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R L+ A+ N +H + + +E IH +L+HDD+ +D+ IRR T Sbjct: 52 GKRLRPILLLLSAAATGGINESHYV---LASVVEMIHLATLVHDDV--LDDALIRRHVAT 106 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 V+ +++ T+++ G+ L T+AF + +S L D R+ ++ N+ +G L Q+ + Sbjct: 107 VNSRWNNETSVLVGDFLFTHAFHLTAS----LGD-ARACRLIGRATNLVCEGELA-QIYE 160 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + + E Q I KT L + + GA+ A A ++ E + +G LG+ FQ+ Sbjct: 161 RGNHELSEEQYLEIINGKTAELCAISTQLGALYASADESIVEAMDEYGRALGVAFQI 217 >gi|150009558|ref|YP_001304301.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503] gi|256838290|ref|ZP_05543800.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp. D13] gi|149937982|gb|ABR44679.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503] gi|256739209|gb|EEU52533.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp. D13] Length = 324 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 13/195 (6%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL SAI L GK +R LV A + + +E +H +LIHDD+ +D Sbjct: 32 RLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVTDNTINSAVLLELLHTATLIHDDV--ID 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 RRG P+++ +D +++ G+ +L+ A +I S +T ++R ++ + N+G Sbjct: 90 ETKQRRGVPSLNAIFDNRISVLVGDYVLSTA--LIRSIQT---GDLR---IVGIISNLGR 141 Query: 157 QGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G Q+ ++ +DE + K KT L+ E GAI + AS R FG Sbjct: 142 DLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGAISSGASAEVIALCREFG 201 Query: 215 ENLGIIFQLADDLLD 229 E LG FQ+ DD+ D Sbjct: 202 EYLGYCFQIKDDIFD 216 >gi|321399323|emb|CAM67227.2| putative polyprenyl synthase [Leishmania infantum JPCM5] Length = 742 Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 19/194 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK RS ++ C + + + R A E +H SLI DD+ DN +RRG VH Sbjct: 446 GGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDI--QDNSVVRRGGKCVH 503 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++Y TAI AG+ F + + Q ++ + L ++ L G GQ LDI Sbjct: 504 VEYGVPTAINAGSACY---FMGPRAARIQDLPPEKASRIYQLYFDVLLAGH-AGQGLDIY 559 Query: 169 D---------EFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 E D + +F I KTG + C ++ A E + FG Sbjct: 560 RLDYLMPKVVETGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAPTVLSEAVERFGL 619 Query: 216 NLGIIFQLADDLLD 229 LG+ FQ+ DD L+ Sbjct: 620 ALGLAFQIVDDALN 633 >gi|206561780|ref|YP_002232545.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315] gi|198037822|emb|CAR53766.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315] Length = 331 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 52 GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DET+ + + KT L + GA++A A + +G +G FQ+ DD L Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRVGTAFQIMDDWL 223 Query: 229 D 229 D Sbjct: 224 D 224 >gi|146084366|ref|XP_001464985.1| polyprenyl synthase [Leishmania infantum JPCM5] Length = 742 Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 19/194 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK RS ++ C + + + R A E +H SLI DD+ DN +RRG VH Sbjct: 446 GGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDI--QDNSVVRRGGKCVH 503 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++Y TAI AG+ F + + Q ++ + L ++ L G GQ LDI Sbjct: 504 VEYGVPTAINAGSACY---FMGPRAARIQDLPPEKASRIYQLYFDVLLAGH-AGQGLDIY 559 Query: 169 D---------EFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 E D + +F I KTG + C ++ A E + FG Sbjct: 560 RLDYLMPKVVETGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAPTVLSEAVERFGL 619 Query: 216 NLGIIFQLADDLLD 229 LG+ FQ+ DD L+ Sbjct: 620 ALGLAFQIVDDALN 633 >gi|83721521|ref|YP_441686.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264] gi|167618604|ref|ZP_02387235.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis Bt4] gi|257137855|ref|ZP_05586117.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264] gi|83655346|gb|ABC39409.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264] Length = 330 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPALLLLVAGALGEHTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 109 ALFGNAASVLVGDYLYSRSFEMMVG-----VGKMRVMEILSEATTIISEGEVL-QLLNMH 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A GA++A A + +G +G FQ+ DD L Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 222 Query: 229 D 229 D Sbjct: 223 D 223 >gi|269794087|ref|YP_003313542.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM 10542] gi|269096272|gb|ACZ20708.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM 10542] Length = 337 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 H D L + L+ GGK++R L A L + +E H +L HDD+ Sbjct: 36 HADELANTTSRHLVDAGGKRLRPLLALLTAELGESARPEVIDAAVVVELTHLATLYHDDV 95 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 MD+ +RRG P H + AI+ G+ L A ++ + +R Q Sbjct: 96 --MDSAPLRRGAPAAHEVWGNSVAILTGDLLFARASVTVAGLGPE---AVRWQAET---- 146 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + + GQ+ + DE V + KT +L+ + GA A E Sbjct: 147 ---FERLCLGQLHETVGPRPDEDPVQHYLQVLSDKTASLIATSARFGARYAGCRPEIVEI 203 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 + FGE +G+ FQLADD++D D Sbjct: 204 VANFGEKVGVAFQLADDVIDLTSD 227 >gi|85373560|ref|YP_457622.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis HTCC2594] gi|84786643|gb|ABC62825.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis HTCC2594] Length = 340 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 10/186 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L ++ AA+E IH +L+HDD+ +D +RRGK + Sbjct: 59 GGKRLRPMLTLAGAELVGYQGSRHHKLAAAVEFIHTATLLHDDV--VDGSEMRRGKAAAN 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + ++ G+ L + AFE+++ + +R +LS + +G + L Q Sbjct: 117 IIFGNPATVLVGDFLFSRAFELMTEDGS-----LRVLKILSNASAVIAEGEVA--QLSAQ 169 Query: 169 DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + E + I KT AL A A++A + + L +G NLG+ FQL DD Sbjct: 170 RKLETSEERYLDIIGAKTAALFAAASRISAVVAECDDSHERALDDYGRNLGVAFQLVDDA 229 Query: 228 LDCEED 233 +D + D Sbjct: 230 IDYDSD 235 >gi|312143242|ref|YP_003994688.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus'] gi|311903893|gb|ADQ14334.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus'] Length = 330 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKK+R FL+ AS + + L +G++IE +H SL+HDD+ +D+ +RRGK T Sbjct: 41 GGKKLRPFLMFLAASFGDYDKKELLDLGSSIEILHMASLLHDDI--IDDADLRRGKVTAQ 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ + A+ G+ L++ F+I L + + + ++ + N+ L + G++ + Sbjct: 99 KRFGKNEAVFIGDFLISRTFDI-------LFEYLDKETLIKMNKNLRL--ICEGEIEQAE 149 Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ I + + KT L + GA ++ + L G +G+ FQ+ D Sbjct: 150 KKYDFNISIRDYYRRIRHKTALLFAISSYLGAYVSGIRGKKLNILYKLGLEIGMAFQIQD 209 Query: 226 DLLD 229 D+LD Sbjct: 210 DILD 213 >gi|15610519|ref|NP_217900.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis H37Rv] gi|148663246|ref|YP_001284769.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis H37Ra] gi|167966941|ref|ZP_02549218.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis H37Ra] gi|2661662|emb|CAA15768.1| POSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE) (POLYPRENYL DIPHOSPHATE SYNTHASE) [Mycobacterium tuberculosis H37Rv] gi|148507398|gb|ABQ75207.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis H37Ra] Length = 350 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 24/223 (10%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 + I+++ + L H+ + DR +A GK R+ LV A+ + A Sbjct: 37 RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+ L A I+ Sbjct: 93 PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRIL-- 148 Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 T L D IR M L IG +L GQ D+++ + KT Sbjct: 149 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 200 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 AL C GA++A+A L FG LG+ FQ DDL+ Sbjct: 201 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 243 >gi|325067554|ref|ZP_08126227.1| Polyprenyl synthetase [Actinomyces oris K20] Length = 291 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 25/166 (15%) Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133 G A+E H +L HDD+ MD +RRG P+ + AI+ G+ L+ A +++++ Sbjct: 2 GVAVELTHIATLYHDDV--MDEAPLRRGAPSAQTVWGNSAAILTGDVLVARASQLMAALG 59 Query: 134 PKTQL---KDNIR---SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 P+ + K R QL +L G D D +I QV KTG+ Sbjct: 60 PEAVMAHAKTFERLCMGQLHETLPRPAGT---------DPVDHYI---QVL---ADKTGS 104 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ + GA++ A + ++ + FGE +G+ FQLADD++D D Sbjct: 105 LIAVSARYGAMLTGAGTHTEQIVEEFGERIGVAFQLADDVIDLMSD 150 >gi|10801560|dbj|BAB16693.1| GGPP synthase 1 [Nicotiana tabacum] Length = 127 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 3/124 (2%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRGKPT H Y E A++AG+ LL +AFE I++ + + + L +IG +G+ Sbjct: 4 LRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIAAATAGVSPSRILAAIGELAKSIGTEGL 63 Query: 160 LGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 + GQ+ DI + + + I KT AL+ + GAI+ + E E+LR F Sbjct: 64 VAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTGEEVEKLRRFARC 123 Query: 217 LGII 220 +G++ Sbjct: 124 IGLL 127 >gi|11465411|ref|NP_045198.1| prenyl transferase [Cyanidium caldarium] gi|14195057|sp|Q9TLS1|PREA_CYACA RecName: Full=Prenyl transferase gi|6466314|gb|AAF12896.1|AF022186_18 unknown [Cyanidium caldarium] Length = 323 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 36/238 (15%) Query: 9 LQENSKRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 ++ NSK + ++ +DLL QT + + +N L +A ++ L+ KKIR +V A Sbjct: 1 MKVNSKTLQSVKEDLLNIEQTLNKLIKVNNPILSAAAKHLLIVESKKIRPAIVLLVAKAI 60 Query: 66 NVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + N + R+ E IH +L+HDD+ +D IRRG +V+ + A+ AG+ Sbjct: 61 DKNKKIKTSQQRLAEVTEIIHTATLLHDDV--VDESIIRRGTKSVNKTFGNKIAVFAGDF 118 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQV 177 L +S L+ +N+ + + + D+ Q Sbjct: 119 LFA-----------------QSSWYLANINNLEVVKAISKVITDLAEGELQQNLTQFNTY 161 Query: 178 FMIQKM------KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + I K KT +L+ +C+S +++ Q+ + +G+NLG+ FQ+ DD+LD Sbjct: 162 YSIIKYLEKSFNKTASLIAASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILD 219 >gi|289157786|gb|ADC84423.1| geranylgeranyl diphosphate synthase [Vibrio campbellii] Length = 287 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 26/233 (11%) Query: 7 SKLQENSKRIDTILD--DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 S+ + + KRI T D + LL S Q H + + GG +IR + + + Sbjct: 5 SRSKASQKRI-TYQDCEEFLLSVVSGNQPAH--------YHLMTGGSRIRMRVCLDMSLC 55 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 +N A+R+ +A+E +H SLIHDD+ D +RRG+ V +++ AI G+ L+ Sbjct: 56 LGLNDEDAMRLASAVELLHNASLIHDDI--QDGDSLRRGQSAVWVKFGTNVAICTGDYLI 113 Query: 125 TYAFEI---ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQVFMI 180 AF I ISSP N+ QL+ + + + + + GQ D+ E I I Sbjct: 114 ARAFGILANISSP------NVLPQLLEATQNAVSV--TVEGQNADLTAKEHISPQNYESI 165 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + K G L+ + E I + NE R +L I +Q+ DD+ D ED Sbjct: 166 AEKKAGPLLALSLELPLI-SSGRLNEIPTARHAASSLAIAYQILDDIKDSVED 217 >gi|322498420|emb|CBZ33493.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 742 Score = 65.9 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 19/194 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK RS ++ C + + + R A E +H SLI DD+ DN +RRG VH Sbjct: 446 GGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDI--QDNSVVRRGGKCVH 503 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++Y TAI AG+ F + + Q ++ + L ++ L G GQ LDI Sbjct: 504 VEYGVPTAINAGSACY---FMGPRAARIQDLPPEKASRIYQLYFDVLLAGH-AGQGLDIY 559 Query: 169 D---------EFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 E D + +F I KTG + C ++ A E + FG Sbjct: 560 RLDYLMPKVVESGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAPTVLSEAVERFGL 619 Query: 216 NLGIIFQLADDLLD 229 LG+ FQ+ DD L+ Sbjct: 620 ALGLAFQIVDDALN 633 >gi|148977829|ref|ZP_01814384.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3] gi|145962898|gb|EDK28169.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3] Length = 323 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLALLSARALGYQGEAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++++ + +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTTLGS-----LRILELMSEAVNVIAEGEVQ-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + KT L A + GAI+ +S + ++ +G+ LG FQL DD++ Sbjct: 155 NPDTTEESYMQVIYSKTARLFEAATQIGAILTESSPEIETAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTAD 219 >gi|45644728|gb|AAS73116.1| predicted geranylgeranyl pyrophosphate synthase [uncultured marine gamma proteobacterium EBAC20E09] Length = 314 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 98/180 (54%), Gaps = 10/180 (5%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GKKIRS L +S + + ++ + IE +H +L+HDD+ +DN RRG +V+ Sbjct: 40 GKKIRSRLNLIASS--SSKNSDRYKLASIIELLHTATLVHDDV--VDNASTRRGAISVNS 95 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + ++ G+ + + AF ++ K +I ++L T++I QG L Q+ I + Sbjct: 96 LWSNAHGVLIGDYIYSKAFMLMVEIG---KTDILAELA-DATNDIS-QGELI-QLDAISN 149 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I ++ I KTG L + ++GA++A A++N + + +N+GI+FQ+ DDLLD Sbjct: 150 IKISLNKLKKISYFKTGRLFEASAKTGAMLAGANKNFIKNISESAKNIGILFQIKDDLLD 209 >gi|296123158|ref|YP_003630936.1| hypothetical protein Plim_2915 [Planctomyces limnophilus DSM 3776] gi|296015498|gb|ADG68737.1| protein of unknown function DUF116 [Planctomyces limnophilus DSM 3776] Length = 634 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 27/203 (13%) Query: 49 GGKKIRSFL-------VTECASLFNVNHLTAL-------RVGAAIECIHCYSLIHDDLPS 94 GGK++R F+ +T A L + AL RV AIE H SLIHDD+ Sbjct: 304 GGKRLRPFITLAAYDALTGAAGLTADHQDQALEYPPAVNRVAMAIEAFHKASLIHDDI-- 361 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM--LSLTH 152 DN R GK T+H QY AI G+ L+ + ++S+ + +L + + ++ S H Sbjct: 362 QDNDQFRYGKETLHRQYGVGPAINLGDHLIGAGYRLVSASRKELGAEVAADILDAFSAAH 421 Query: 153 NIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 + GQ ++Q + + I +KT A +G MA + Sbjct: 422 ----MKLCEGQGAELQWSRSGRHDLTPAEAMKIYALKTSPAFEAALYAGIRMAGPVDDYA 477 Query: 208 ERLRCFGENLGIIFQLADDLLDC 230 E + F +LG+ FQ+ +DL D Sbjct: 478 EMITQFSRHLGVAFQILNDLSDW 500 >gi|224419075|ref|ZP_03657081.1| polyprenyl synthetase ) [Helicobacter canadensis MIT 98-5491] gi|253828013|ref|ZP_04870898.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491] gi|313142585|ref|ZP_07804778.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491] gi|253511419|gb|EES90078.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491] gi|313131616|gb|EFR49233.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491] Length = 306 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 12/156 (7%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A IE I SL+HDD+ +DN RR +P+++ + AI+ G+ L + AF Sbjct: 56 AIIEMIQNASLLHDDV--IDNATTRRSQPSINAIAGDKNAIMLGDVLYSKAF-------C 106 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKTGALMCFAC 193 +L D S M+ + + + G+M D++ +F +E + + + KT +L+ Sbjct: 107 ELSDFQESFPMIPRIVSNAVTLLAIGEMEDVELAKQFNANEAKYLKMIEHKTASLIESTA 166 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A +A +Q E + R +G NLGI FQ+ DD+LD Sbjct: 167 YAAAFLAGRNQEEAKDFRVYGRNLGIAFQIIDDVLD 202 >gi|242011677|ref|XP_002426574.1| Decaprenyl-diphosphate synthase subunit, putative [Pediculus humanus corporis] gi|212510711|gb|EEB13836.1| Decaprenyl-diphosphate synthase subunit, putative [Pediculus humanus corporis] Length = 262 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 86/158 (54%), Gaps = 14/158 (8%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V E IH SLIHDD+ +D RRGKP+V++ ++ +AG+ +L A +I+ Sbjct: 12 VAMIAEMIHSASLIHDDV--IDQSDFRRGKPSVNVLWNHKKVTMAGDFILAVASMMIA-- 67 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQVFMIQKM--KTGALMCF 191 +L+D+ ++LT + + ++ G+ + + E +E + K KT +L+ Sbjct: 68 --RLRDD-----KVTLTLSQVVTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIAN 120 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + ++ A++A A ++ E +G N+G+ FQL DDLLD Sbjct: 121 SAKAVAMLAGADESLSEVAFQYGRNIGLAFQLVDDLLD 158 >gi|298373963|ref|ZP_06983921.1| polyprenyl synthetase [Bacteroides sp. 3_1_19] gi|298268331|gb|EFI09986.1| polyprenyl synthetase [Bacteroides sp. 3_1_19] Length = 324 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 13/195 (6%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL SAI L GK +R LV A + + +E +H +LIHDD+ +D Sbjct: 32 RLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVTDNTINSAVLLELLHTATLIHDDV--ID 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 RRG P+++ +D +++ G+ +L+ A +I S +T ++R ++ + N+G Sbjct: 90 ETKQRRGVPSLNAIFDNRISVLVGDYVLSTA--LIRSIQT---GDLR---IVGIISNLGR 141 Query: 157 QGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G Q+ ++ +DE + K KT L+ E GAI + AS R FG Sbjct: 142 DLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGAISSGASAEVIALCREFG 201 Query: 215 ENLGIIFQLADDLLD 229 E LG FQ+ DD+ D Sbjct: 202 EYLGYCFQIKDDIFD 216 >gi|262383148|ref|ZP_06076285.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B] gi|301311752|ref|ZP_07217677.1| polyprenyl synthetase [Bacteroides sp. 20_3] gi|262296026|gb|EEY83957.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B] gi|300830312|gb|EFK60957.1| polyprenyl synthetase [Bacteroides sp. 20_3] Length = 324 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 13/195 (6%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL SAI L GK +R LV A + + +E +H +LIHDD+ +D Sbjct: 32 RLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVTDNTINSAVLLELLHTATLIHDDV--ID 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 RRG P+++ +D +++ G+ +L+ A +I S +T ++R ++ + N+G Sbjct: 90 ETKQRRGVPSLNAIFDNRISVLVGDYVLSTA--LIRSIQT---GDLR---IVGIISNLGR 141 Query: 157 QGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G Q+ ++ +DE + K KT L+ E GAI + AS R FG Sbjct: 142 DLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGAISSGASAEVIALCREFG 201 Query: 215 ENLGIIFQLADDLLD 229 E LG FQ+ DD+ D Sbjct: 202 EYLGYCFQIKDDIFD 216 >gi|239944197|ref|ZP_04696134.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] Length = 347 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 13/184 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV A + A+R A+E H ++L+HDD+ +D RR +PT Sbjct: 62 GKAIRPALVLAAARALGGDPERAIRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 119 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--I 167 + AII G+ +L A +++ ++L + + GQ D Sbjct: 120 VFGVPDAIITGDAMLALAQRLLAEDAHPAAAPAAARLSTCVIE------LCAGQQADCAF 173 Query: 168 QDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ DE + + KTGAL+ AC GA+ A A + FG G+ FQL Sbjct: 174 EERGPDEVTLDECLTMATAKTGALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLI 233 Query: 225 DDLL 228 DDL+ Sbjct: 234 DDLI 237 >gi|312065737|ref|XP_003135935.1| polyprenyl synthetase [Loa loa] gi|307768907|gb|EFO28141.1| polyprenyl synthetase [Loa loa] Length = 370 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 16/161 (9%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ E IH SL+HDD+ +D IRRG TV+ + A++ G+ +L A +++ S Sbjct: 116 KIAVISEMIHTASLVHDDV--IDKADIRRGSRTVNALWGNKMAVLVGDFILARATQVLCS 173 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVF---MIQKM-KTGAL 188 I ++S+ I ++ ++ G+ + + D ++ TQ F M + KT +L Sbjct: 174 --------IGRPSVISVMATI-IEDLVKGEFMQMNDGTDLNATQRFNKYMAKTYSKTASL 224 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +C+S A+++ S+ ++ +G++LGI FQ+ DDLLD Sbjct: 225 FANSCKSAAMLSDVSEADELSAYEYGKSLGIAFQMIDDLLD 265 >gi|255013149|ref|ZP_05285275.1| polyprenyl synthetase [Bacteroides sp. 2_1_7] Length = 345 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 13/195 (6%) Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 RL SAI L GK +R LV A + + +E +H +LIHDD+ +D Sbjct: 53 RLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVTDNTINSAVLLELLHTATLIHDDV--ID 110 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 RRG P+++ +D +++ G+ +L+ A +I S +T ++R ++ + N+G Sbjct: 111 ETKQRRGVPSLNAIFDNRISVLVGDYVLSTA--LIRSIQT---GDLR---IVGIISNLGR 162 Query: 157 QGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G Q+ ++ +DE + K KT L+ E GAI + AS R FG Sbjct: 163 DLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGAISSGASAEVIALCREFG 222 Query: 215 ENLGIIFQLADDLLD 229 E LG FQ+ DD+ D Sbjct: 223 EYLGYCFQIKDDIFD 237 >gi|159465717|ref|XP_001691069.1| geranyl diphosphate synthase [Chlamydomonas reinhardtii] gi|158279755|gb|EDP05515.1| geranyl diphosphate synthase [Chlamydomonas reinhardtii] Length = 410 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 8/156 (5%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG +++ TAI+AG+ LL A ++S Sbjct: 153 RLAEIAELIHVASLLHDDV--IDDAQTRRGVLSLNTSVGNKTAILAGDFLLARASVTLAS 210 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + + SQ+ L H + + M QM ++ +D KT +LM + Sbjct: 211 LRNSEIVELMSQV---LEHLVSGEIM---QMTATSEQLLDLEHYLAKTYCKTASLMANSS 264 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 S A++A A+ + +G +LGI FQ+ DDLLD Sbjct: 265 RSVAVLAGAAPEVCDMAWSYGRHLGIAFQVVDDLLD 300 >gi|281491887|ref|YP_003353867.1| Heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. lactis KF147] gi|281375598|gb|ADA65104.1| Heptaprenyl diphosphate synthase component II [Lactococcus lactis subsp. lactis KF147] Length = 319 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R + + ++ L + A++E +H +L+HDD+ +D+ RRG T+ Sbjct: 47 GGKMLRPAYLLLFSGFTVLSENERLALAASVEMMHIATLVHDDV--IDHADTRRGVATLS 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167 +Y A+ AG+ L F ++S +L + LT NIG ++ +LGG++ + Sbjct: 105 AKYGPEIAVYAGDYLFIAVFRLMSEHSLELSN---------LTKNIGSIERLLGGELGQL 155 Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 F + +T I+ + KTG L + +++ + K R G N+GI FQ+ Sbjct: 156 NHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNTLTK-RAYKIGMNIGISFQIM 214 Query: 225 DDLLD 229 DD LD Sbjct: 215 DDYLD 219 >gi|222152303|ref|YP_002561478.1| polyprenyl synthetase [Streptococcus uberis 0140J] gi|222113114|emb|CAR40511.1| polyprenyl synthetase [Streptococcus uberis 0140J] Length = 326 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 32/219 (14%) Query: 29 SHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCY 85 + +Q ++ + + I+ + GGK +R FL + ++ A++E +H Sbjct: 24 NRVQVRNTEIEKAIIQLSQAGGKYLRPAFFFLFSSFGPYQKERKEQLQKIAASLEILHMA 83 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 +L+HDD+ +D+ +RRG PT+ QY + A+ G+ L T FE+I Sbjct: 84 TLVHDDV--IDDSPLRRGNPTIQTQYGKDVAVYTGDFLFTVFFELI-------------- 127 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-----------KTGALMCFACE 194 L N + M I +D+ ++ QK KT L A + Sbjct: 128 --LESMSNTPYMAINAKSMKKILVGELDQMHLYFNQKQSIRDYLRAISGKTAELFKLASQ 185 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GA + A + G ++G+ FQ+ DD+LD D Sbjct: 186 EGAYFSGADETVVRLAGRIGYHIGMTFQILDDILDYTAD 224 >gi|150026116|ref|YP_001296942.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86] gi|149772657|emb|CAL44140.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86] Length = 325 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 18/202 (8%) Query: 39 LLSAIRYALLG--GKKIRSFLVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPS 94 LL+ I Y ++ GK++R V A + + + R IE IH +L+HDD+ Sbjct: 32 LLNRITYYVVNRKGKQMRPMFVFLTAKMISGGTVLERTYRGALVIELIHTATLVHDDV-- 89 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +D+ RRG +++ + A++ G+ LL+ ++S DN L+ ++ + Sbjct: 90 VDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLKIIS--V 140 Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 ++ M G++L I+ I E + I + KT L+ C GA + + E++R Sbjct: 141 AVREMSEGELLQIEKARRLDITEAIYYEIIRQKTATLIAACCALGAQSVSNDEVQVEKMR 200 Query: 212 CFGENLGIIFQLADDLLDCEED 233 FGE +G+ FQ+ DDL D ED Sbjct: 201 KFGELIGMAFQIKDDLFDYTED 222 >gi|327402252|ref|YP_004343090.1| trans-hexaprenyltranstransferase [Fluviicola taffensis DSM 16823] gi|327317760|gb|AEA42252.1| Trans-hexaprenyltranstransferase [Fluviicola taffensis DSM 16823] Length = 322 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 19/212 (8%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRS-FLVTECASLFNVNHLTALRVGAAIE 80 L + H + LL I + ++ GK++R FL L VN T + + +E Sbjct: 16 LFEVRFHESMKSKVPLLDKITHYIIRRKGKQMRPMFLFLTAKMLGEVNEKT-YQSASLVE 74 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H +L+HDD+ +D+ RRG +V+ + A++ G+ +L+ ++ S + D Sbjct: 75 LLHTATLVHDDV--VDDANERRGFFSVNALWKNKIAVLVGDYMLSRV--LLHSLEN---D 127 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGA 197 NIR+ +++ ++ M G++L I+ I E F + + KT +L+ CES A Sbjct: 128 NIRALQIVAR----AVREMSEGELLQIEKARKLDITEEVYFDVIRQKTASLIATVCESAA 183 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ +R+R FGE +G+ FQ+ DD+ D Sbjct: 184 ASVD-REDMADRMRNFGELVGLAFQVKDDIFD 214 >gi|291447668|ref|ZP_06587058.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] gi|291350615|gb|EFE77519.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] Length = 381 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 13/184 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV A + A+R A+E H ++L+HDD+ +D RR +PT Sbjct: 96 GKAIRPALVLAAARALGGDPERAIRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 153 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--I 167 + AII G+ +L A +++ ++L + + GQ D Sbjct: 154 VFGVPDAIITGDAMLALAQRLLAEDAHPAAAPAAARLSTCVIE------LCAGQQADCAF 207 Query: 168 QDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ DE + + KTGAL+ AC GA+ A A + FG G+ FQL Sbjct: 208 EERGPDEVTLDECLTMATAKTGALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLI 267 Query: 225 DDLL 228 DDL+ Sbjct: 268 DDLI 271 >gi|257871156|ref|ZP_05650809.1| trans-hexaprenyltranstransferase [Enterococcus gallinarum EG2] gi|257805320|gb|EEV34142.1| trans-hexaprenyltranstransferase [Enterococcus gallinarum EG2] Length = 328 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 9/162 (5%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+ + AAIE +H SLIHDD+ +D RR PT+ Q+ A+ AG+ L F+++ Sbjct: 70 AVALSAAIEMLHTASLIHDDI--VDQADTRRSLPTIRAQFGNDVAVYAGDYLFVCCFKLL 127 Query: 132 SSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 + LK I S+ M ++ L G LG QM D + KT L Sbjct: 128 ADYAGSLKSLQINSRSMETI-----LAGELG-QMSKRYDLNVTIEDYLENISGKTAELFA 181 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +C GA + AS + + G+++G+ FQ+ DD+LD + Sbjct: 182 LSCFIGAYESGASLRLANQAKTIGQSIGLAFQIMDDILDYSQ 223 >gi|307325382|ref|ZP_07604584.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306888851|gb|EFN19835.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 365 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+E +H +SL+HDDL MD RR + TV Sbjct: 72 GGKAVRPALALLSAEAAGAAPGAGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 129 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A EI+ T D R+ L+ + ++ GQ DI Sbjct: 130 KVHGPAQAILVGDALFALANEILLELGT--ADAGRATRRLT----AATRKLIDGQAQDIS 183 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V ++ KTGAL+ A GA++ A + L +G +LG+ FQ D Sbjct: 184 YEHRERVTVEECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVD 243 Query: 226 DLL 228 DLL Sbjct: 244 DLL 246 >gi|42522155|ref|NP_967535.1| octaprenyl diphosphate synthase [Bdellovibrio bacteriovorus HD100] gi|39574686|emb|CAE78528.1| octaprenyl diphosphate synthase [Bdellovibrio bacteriovorus HD100] Length = 318 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 17/188 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK R+ L+ ++ + T L + IE IH SL+HDDL +D ++RRGK Sbjct: 33 GGKGFRAKLIRMMSAHLGIEPKTELLLSQTIEFIHNASLLHDDL--IDRSHLRRGKTAAW 90 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-- 166 ++Y A++AG+ LL +S NI+ ++ T + + +L G+ L Sbjct: 91 LKYTPEYAVLAGDYLLARVMVNLSG-----HGNIK---LVQYTAEV-ISDLLEGEWLQDS 141 Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER--LRCFGENLGIIFQL 223 + D F+ Q+ I +KT +L + C +A +E+ L G LG +FQ Sbjct: 142 VVGDFFVTMEQLDRIHNLKTASLFKW-CIRAPFIAQERYDEELHNILSEMGTLLGQLFQR 200 Query: 224 ADDLLDCE 231 +DDLLD + Sbjct: 201 SDDLLDYD 208 >gi|308232443|ref|ZP_07664084.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu001] gi|308379494|ref|ZP_07486502.2| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu010] gi|308380676|ref|ZP_07669246.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu011] gi|308406139|ref|ZP_07669521.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu012] gi|308213955|gb|EFO73354.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu001] gi|308356823|gb|EFP45674.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu010] gi|308360773|gb|EFP49624.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu011] gi|308364378|gb|EFP53229.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu012] Length = 354 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 24/223 (10%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 + I+++ + L H+ + DR +A GK R+ LV A+ + A Sbjct: 41 RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 96 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+ L A I+ Sbjct: 97 PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRIL-- 152 Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 T L D IR M L IG +L GQ D+++ + KT Sbjct: 153 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 204 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 AL C GA++A+A L FG LG+ FQ DDL+ Sbjct: 205 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 247 >gi|149634722|ref|XP_001506831.1| PREDICTED: similar to PDSS1 protein [Ornithorhynchus anatinus] Length = 398 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 24/200 (12%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A NV+H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 116 GKAFRPIIVVLMARACNVHHDNSRDVQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 173 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++S+ + L+ ++ G Sbjct: 174 GKHTVNQIWGEKKAVLAGDFILSAASVALA--------RIGNTTIVSVLTQV-LEDLVRG 224 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +I+ E +G+N+GI Sbjct: 225 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPVVHEIAYQYGKNVGI 284 Query: 220 IFQLADDLLD---CEEDLPK 236 FQL DD+LD C + L K Sbjct: 285 AFQLIDDVLDFTACTDQLGK 304 >gi|269128599|ref|YP_003301969.1| trans-hexaprenyltranstransferase [Thermomonospora curvata DSM 43183] gi|268313557|gb|ACY99931.1| Trans-hexaprenyltranstransferase [Thermomonospora curvata DSM 43183] Length = 331 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 28/240 (11%) Query: 1 MNGGLP------SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKK 52 M+ G+P + L + + ++++LL+Q+ + +D LL+ L+ GGK+ Sbjct: 1 MSSGVPFDLSVDAALAADMRERLAVVEELLVQSVTS-----DDPLLAEASKHLVEAGGKR 55 Query: 53 IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112 R LV + + + +E H +L HDD+ MD +RRG+ + ++++ Sbjct: 56 FRPALVLLASHFGDPAAAGVVPAAVVVELTHLATLYHDDV--MDEATVRRGEESANVRWT 113 Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172 AI+ G+ L A ++++ Q +R Q ++ GQ+ + Sbjct: 114 NTVAILTGDYLFARASDLLADLGPQ---AVRIQAR-------AFARLVRGQIAETSGPAP 163 Query: 173 DETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 D + + KT +L+ + GA++A A Q E + E +G+ FQL+DD+LD Sbjct: 164 DADPLEHYLQVVADKTASLIAVSGHLGALLAGAPQQVVETITSACEKIGVAFQLSDDILD 223 >gi|86147820|ref|ZP_01066126.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222] gi|85834347|gb|EAQ52499.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222] Length = 323 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 110/224 (49%), Gaps = 12/224 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNVNH 69 K I T+ + + + +Q Q N L++ + + ++ GGK++R L A Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F+ Sbjct: 64 EAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQ 121 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++++ + +R ++S + N+ +G + Q+++ + E + KT L Sbjct: 122 MMTTLGS-----LRILELMSESVNVIAEGEVQ-QLMNCNNPDTTEESYMQVIYSKTARLF 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GAI+ ++ + ++ +G+ LG FQL DD++D D Sbjct: 176 EAATQIGAILTESTPEIETAMQNYGKYLGTAFQLIDDVMDYTAD 219 >gi|116074594|ref|ZP_01471855.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. RS9916] gi|116067816|gb|EAU73569.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. RS9916] Length = 323 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 11/184 (5%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGKKIR +V + +L LTA R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKKIRPGIVLLVSRALSPEGELTARHRRLAEITEMIHTASLVHDDV--VDEAATRRGVA 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +++ A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFRYDTG 161 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +++++ KT +L+ + + +++ + + + L FG LG+ FQ+ D Sbjct: 162 QSFETYLEKSYC------KTASLIANSARAAGVLSEQTPDRLDSLYRFGRQLGLAFQVVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|239990653|ref|ZP_04711317.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 11379] Length = 349 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 13/184 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV A + A+R A+E H ++L+HDD+ +D RR +PT Sbjct: 64 GKAIRPALVLAAARALGGDPERAIRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 121 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--I 167 + AII G+ +L A +++ ++L + + GQ D Sbjct: 122 VFGVPDAIITGDAMLALAQRLLAEDAHPAAAPAAARLSTCVIE------LCAGQQADCAF 175 Query: 168 QDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ DE + + KTGAL+ AC GA+ A A + FG G+ FQL Sbjct: 176 EERGPDEVTLDECLTMATAKTGALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLI 235 Query: 225 DDLL 228 DDL+ Sbjct: 236 DDLI 239 >gi|198284597|ref|YP_002220918.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665678|ref|YP_002427267.1| octaprenyl-diphosphate synthase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249118|gb|ACH84711.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517891|gb|ACK78477.1| octaprenyl-diphosphate synthase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 322 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A + + + A +E IH +L+HDD+ +D +RR T + Sbjct: 43 GGKRLRPIVLLLAARMGGERGPRPISLAAVVEFIHTATLLHDDV--VDGSELRRSNATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A++ G+ L +FE++ ++D ++R ++ ++ QG + Q+ + Sbjct: 101 QRWGNAAAVLVGDFLYARSFEMM------VQDGDMRILATMAEATSVIAQGEVA-QLENA 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D + F + + KT L A GA++ ++ L +G LGI FQL DD Sbjct: 154 NDPDLSPEAYFAVIEAKTAKLFEAAARIGALVNELDAAAEKALAQYGSLLGIAFQLMDDA 213 Query: 228 LD 229 LD Sbjct: 214 LD 215 >gi|167580495|ref|ZP_02373369.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis TXDOH] Length = 297 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 30 GGKRLRPALLLLVAGALGEHTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 88 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE + + + KT L A GA++A A + +G +G FQ+ DD L Sbjct: 142 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 201 Query: 229 D 229 D Sbjct: 202 D 202 >gi|320593030|gb|EFX05439.1| hexaprenyl pyrophosphate synthetase [Grosmannia clavigera kw1407] Length = 556 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 89/166 (53%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG P+ ++++ A++AG+ LL A ++ Sbjct: 298 RLAEITELIHTASLLHDDV--IDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALA- 354 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK--M 183 +L++ +L+ ++ N ++ G+ + +++ DET + +QK + Sbjct: 355 ---RLRNAEVVELLSTVIAN-----LVEGEFMQLKNTARDETNPVWSEATLQYYLQKTYL 406 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ +C + A++ A + +G+NLG+ FQL DD+LD Sbjct: 407 KTASLISKSCRAAALLGGADAQTVDAAYAYGKNLGLAFQLVDDMLD 452 >gi|227509263|ref|ZP_03939312.1| possible trans-hexaprenyltranstransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191261|gb|EEI71328.1| possible trans-hexaprenyltranstransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 325 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 18/191 (9%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK +R ++ +E + L A AAIE +H +LIHDD+ +D +RRG Sbjct: 45 GGKLLRPGFFYIYSEFGEKIPADKLRA--GAAAIELLHVATLIHDDV--IDQSPLRRGVQ 100 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+H QY + AI AG+ L T F+ + D R H +Q +L G++ Sbjct: 101 TIHTQYGQKNAIYAGDYLFTCYFDQVLKSTHDATDLQR--------HIEAMQTILNGELD 152 Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + + + + F KT L + E AI+ HA +N G +G +Q Sbjct: 153 QMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAILTHAPRNIVTLGGEIGLAIGQAYQ 212 Query: 223 LADDLLDCEED 233 + DD+LD D Sbjct: 213 IQDDILDYGGD 223 >gi|326921623|ref|XP_003207056.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Meleagris gallopavo] Length = 336 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 98/190 (51%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 54 GKAFRPMIVVLMARACNIHHSNSREVQASQRSVAIIAEMIHTASLVHDDV--IDDANSRR 111 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++S+ + ++ ++ G Sbjct: 112 GKMTVNQIWGERKAVLAGDFILSAASLALA--------RIGNTTIISVLTQV-IEDLVRG 162 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +I++ E +G+N+GI Sbjct: 163 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILSCPDPKVHEIAYQYGKNIGI 222 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 223 AFQLIDDVLD 232 >gi|184200190|ref|YP_001854397.1| putative polyprenyl diphosphate synthase [Kocuria rhizophila DC2201] gi|183580420|dbj|BAG28891.1| putative polyprenyl diphosphate synthase [Kocuria rhizophila DC2201] Length = 339 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 17/202 (8%) Query: 33 TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + +D+L + LL GGK++R L A + + + +E H SL HD Sbjct: 35 VRSSDQLADVTAHHLLAAGGKRVRPLLALLAAEVAGSVNEDVIEAAVVVELTHLASLYHD 94 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ MD+ +RRG T H + AI+ G+ + A ++S+ + LM+ Sbjct: 95 DV--MDSAPMRRGVETAHTVWGNTVAILTGDMIFARASAMVSALGQE-------SLMIQA 145 Query: 151 THNIGLQGMLGGQMLDIQD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEK 207 + + ++ GQ+ + E D + ++ + KTG+L+ + + GA++ A ++ Sbjct: 146 ST---FERLVIGQLRETTGPAEGQDPLEHYLEVIAGKTGSLIAASGQYGALLGGAPRSVV 202 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 + + +GE +G+ FQLADD++D Sbjct: 203 DLMVVYGEKVGLAFQLADDIID 224 >gi|170782926|ref|YP_001711260.1| geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis subsp. sepedonicus] gi|169157496|emb|CAQ02687.1| geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis subsp. sepedonicus] Length = 340 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 31/204 (15%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R +V L + A VGAA E +H ++HDD+ +D + RRG P V Sbjct: 36 GGKRFRPRMVMAAYDGLGGQDVQAAAHVGAAFEMLHTALIVHDDV--IDRDFTRRGGPNV 93 Query: 108 HIQYDEV-----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 Y ++ A+IAG+ L A+ +I + + ++D RS LM L Sbjct: 94 SGAYRDIATTQGLPQPLAEHRGMSAAVIAGDLALVNAYRLIDA--SGVRDLTRSHLMEIL 151 Query: 151 THNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFAC--ESGAIMAHASQ 204 + G+++D++ + ++ ++++KT A+ F ++GA++A A Sbjct: 152 DDAVFASA--AGELIDVEFSLTADVPSVDEILRMERLKT-AVYSFEAPLQAGAVLAGARP 208 Query: 205 NEKERLRCFGENLGIIFQLADDLL 228 L F ++GI +Q+ DD+L Sbjct: 209 EVVAALGDFDRDIGIAYQVVDDVL 232 >gi|18447424|gb|AAL68276.1| RE18374p [Drosophila melanogaster] Length = 245 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 12/150 (8%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +I+ ++ Sbjct: 2 VHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTI 59 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIM 199 + SQ++ L +Q LG + E +E + K KT +L+ A ++ A++ Sbjct: 60 VLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATAVI 111 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A A N E +G N+G+ FQL DD+LD Sbjct: 112 AQADDNVAEVAFQYGRNIGLAFQLVDDMLD 141 >gi|32473980|ref|NP_866974.1| polyprenyl synthetase [Rhodopirellula baltica SH 1] gi|32444517|emb|CAD74516.1| polyprenyl synthetase [Rhodopirellula baltica SH 1] Length = 659 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 27/246 (10%) Query: 2 NGGLPSKLQENSKRID------TILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIR 54 NG P+ E + ID TI D L + H + ++ Y A++GG Sbjct: 297 NGARPAVTPEQLEGIDPIAATETIALDFLARGGKHSRP-----FITLAAYDAMMGGDGTG 351 Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 + + + N R +IE H SL+HDD+ D R G+P VH ++ Sbjct: 352 A----DGEDVLNRVPDAVRRAALSIETFHKASLVHDDI--EDGDAFRYGQPAVHQRFGTA 405 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNI----RSQLMLSLTH-NIGLQGMLGGQML--DI 167 TAI G+ L+ + ++S + + D++ R L+ SL ++ L G ++L D Sbjct: 406 TAINVGDYLIGLGYRLLS--RNMMGDDVDAGTRVDLLDSLAAAHVRLSEGQGAELLWRDA 463 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D + I +KT A SG MA + + +R F NLG+ FQ+ +DL Sbjct: 464 KDRRLTPLDALKIYALKTSPAFEAALYSGVRMAGDASALIDPIRKFSRNLGVAFQIINDL 523 Query: 228 LDCEED 233 D D Sbjct: 524 NDWAGD 529 >gi|227876918|ref|ZP_03995014.1| trans-hexaprenyltranstransferase [Lactobacillus crispatus JV-V01] gi|256843741|ref|ZP_05549229.1| polyprenyl synthetase [Lactobacillus crispatus 125-2-CHN] gi|256850189|ref|ZP_05555619.1| polyprenyl synthetase [Lactobacillus crispatus MV-1A-US] gi|262047813|ref|ZP_06020763.1| polyprenyl synthetase [Lactobacillus crispatus MV-3A-US] gi|293379832|ref|ZP_06625954.1| polyprenyl synthetase [Lactobacillus crispatus 214-1] gi|312978109|ref|ZP_07789854.1| polyprenyl synthetase family protein [Lactobacillus crispatus CTV-05] gi|227863475|gb|EEJ70898.1| trans-hexaprenyltranstransferase [Lactobacillus crispatus JV-V01] gi|256615161|gb|EEU20362.1| polyprenyl synthetase [Lactobacillus crispatus 125-2-CHN] gi|256713161|gb|EEU28152.1| polyprenyl synthetase [Lactobacillus crispatus MV-1A-US] gi|260571870|gb|EEX28441.1| polyprenyl synthetase [Lactobacillus crispatus MV-3A-US] gi|290923604|gb|EFE00485.1| polyprenyl synthetase [Lactobacillus crispatus 214-1] gi|310895084|gb|EFQ44153.1| polyprenyl synthetase family protein [Lactobacillus crispatus CTV-05] Length = 329 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 109/205 (53%), Gaps = 16/205 (7%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSL 87 ++T ++D + + A GGK +R L+ A + + + +++ ++IE +H SL Sbjct: 28 IRTPYSDLQDALLEMASNGGKYLRPSLLILSAQIASKKETVSKQIIQLASSIEILHMASL 87 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ + RRGK ++ ++ + TA+ AG+ L T+ F++I + ++ I++ Sbjct: 88 IHDDIIDDSDE--RRGKISIQARFGKDTAVYAGDLLFTHFFDLILNAISEQDYMIKNAHT 145 Query: 148 LSLTHNIGLQGMLG--GQMLDIQDEFIDE-TQVFMIQKMKTGALMCFACESGAIMAHASQ 204 + H++ L G LG + ++ +F D T V K KT AL A E G+ + + Sbjct: 146 M---HHL-LAGELGQMAERFNLSQDFNDYLTNV----KGKTAALFRLAAEEGSHFGNGDE 197 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 + L FGENLGI FQ+ DD+LD Sbjct: 198 QTTQALASFGENLGIAFQIVDDILD 222 >gi|302674533|ref|XP_003026951.1| hypothetical protein SCHCODRAFT_61590 [Schizophyllum commune H4-8] gi|300100636|gb|EFI92048.1| hypothetical protein SCHCODRAFT_61590 [Schizophyllum commune H4-8] Length = 443 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 15/165 (9%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T +R+ +E IH SL+HDD+ +D +RRG + + A++ GN +L A Sbjct: 188 TQMRLAHVLEMIHAASLLHDDV--IDASPLRRGVASAPEAFGNNLAVLGGNFVLGRA--- 242 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGAL 188 S+ +L D L+ S+ N ++ G++L ++ + + +QK MKT +L Sbjct: 243 -SAALARLGDLEVVGLIASIISN-----LVEGEILQLKSQNPSDAWNLYLQKTYMKTASL 296 Query: 189 MCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDCE 231 M + + + E +E +G NLGI FQL DD+LD E Sbjct: 297 MAKGARAAVALGGCKEGEVWREVAYAYGRNLGIAFQLQDDILDYE 341 >gi|91077592|ref|XP_973319.1| PREDICTED: similar to AGAP000591-PA [Tribolium castaneum] Length = 446 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 21/209 (10%) Query: 32 QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN-------HLTALRVGAAI-ECI 82 ++ + D L Y G GK IR + A N + LT+ R A I E I Sbjct: 144 RSTYQDDLYEIATYYFDGHGKAIRPMVAILMARAINYHIYKEKSGLLTSQREVAMISEMI 203 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H SL+HDD+ +D RRGKP+V++ ++ +AG+ +L A +I+ K + Sbjct: 204 HTASLVHDDV--IDQSDFRRGKPSVNVMWNHKKVTMAGDFILAVASIMIARLKNNDVTLV 261 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMA 200 SQ++ L +Q LG + E +E + K KT +L+ + +S ++A Sbjct: 262 LSQVVSDLVQGEFMQ--LGSK------ETENERFAHYLTKTYRKTASLIANSVKSVTMLA 313 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229 A + + +G NLG+ FQL DDLLD Sbjct: 314 GADEQLSDISYQYGRNLGLAFQLVDDLLD 342 >gi|86607946|ref|YP_476708.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556488|gb|ABD01445.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 320 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 25/225 (11%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 +L++N R+ + +L A H L SA GGK IR +V A Sbjct: 14 RLRQNLTRLVSAKHPILAMAAEH--------LFSA------GGKGIRPAIVLLIARATTP 59 Query: 68 N-HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + +T R+ E IH SL+HDD+ +D +RRG TV+ +D A++AG+ L Sbjct: 60 DGEITPRHWRLAEITEMIHTASLVHDDV--IDAADVRRGIDTVNTLFDNRIAVLAGDYLF 117 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 A +++ DN+ +LS +G + Q L D + K Sbjct: 118 GQAAWYLAN-----LDNLEVVKLLSKVIMDLPEGEVR-QSLTRFDPDVSMEDYLAKSFYK 171 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T +LM + ++ +++ S+ +RL FG +LGI FQ+ DDLLD Sbjct: 172 TASLMSGSSKAAGLLSGVSEEVADRLFDFGRDLGIAFQIVDDLLD 216 >gi|1749738|dbj|BAA13926.1| unnamed protein product [Schizosaccharomyces pombe] Length = 356 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 10/161 (6%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 LR+ E IH SL+HDD+ +D+ +RRG P+ ++ + +I+AGN +L A +++ Sbjct: 120 LRLAQITEMIHIASLLHDDV--IDHANVRRGSPSSNVAFGNRRSILAGNFILARASTVMA 177 Query: 133 SPKTQLKDNIRSQLMLSLTHN--IGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGAL 188 + + + ++ L + L+ + L+I+ D + I+K +KT +L Sbjct: 178 RLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSLEIKQSNFD----YYIEKSFLKTASL 233 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + +C++ I+ S +G +G FQL DD+LD Sbjct: 234 ISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLD 274 >gi|119356815|ref|YP_911459.1| trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM 266] gi|119354164|gb|ABL65035.1| Trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM 266] Length = 324 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 44 RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 RY L GK+IR LV A + + + R +E +H +LIHDD+ +D +RR Sbjct: 37 RYVLKQQGKQIRPALVLLSAKMCGGVNDSTYRSAIMVELLHSATLIHDDV--VDGAEMRR 94 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G +++ + +++ G+ LL+ K +I S+ ++ M G Sbjct: 95 GLASINALWKNKISVLIGDYLLSKGLLYSLENKDYFSLHIVSE---------AVRRMSEG 145 Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 ++L IQ I E + KT +L+ +C GA A + +++ +GE LG+ Sbjct: 146 EILQIQKTRSLDISEEDYLSVISDKTASLIASSCAMGAASATEDEAAIAKMKNYGEYLGL 205 Query: 220 IFQLADDLLDCEEDLPK 236 FQ+ DDLLD D K Sbjct: 206 AFQIRDDLLDYTGDSNK 222 >gi|295693497|ref|YP_003602107.1| polyprenyl synthetase [Lactobacillus crispatus ST1] gi|295031603|emb|CBL51082.1| Polyprenyl synthetase [Lactobacillus crispatus ST1] Length = 329 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 109/205 (53%), Gaps = 16/205 (7%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSL 87 ++T ++D + + A GGK +R L+ A + + + +++ ++IE +H SL Sbjct: 28 IRTPYSDLQDALLEMASNGGKYLRPSLLILSAQIASKKETVSKQIIQLASSIEILHMASL 87 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ + RRGK ++ ++ + TA+ AG+ L T+ F++I + ++ I++ Sbjct: 88 IHDDIIDDSDE--RRGKISIQARFGKDTAVYAGDLLFTHFFDLILNAISEQDYMIKNAHT 145 Query: 148 LSLTHNIGLQGMLG--GQMLDIQDEFIDE-TQVFMIQKMKTGALMCFACESGAIMAHASQ 204 + H++ L G LG + ++ +F D T V K KT AL A E G+ + + Sbjct: 146 M---HHL-LAGELGQMAERFNLSQDFNDYLTNV----KGKTAALFRLAAEEGSHFGNGDE 197 Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229 + L FGENLGI FQ+ DD+LD Sbjct: 198 QTTQALASFGENLGIAFQIVDDILD 222 >gi|325567804|ref|ZP_08144387.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC 12755] gi|325158495|gb|EGC70643.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC 12755] Length = 339 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 8/186 (4%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R ++ + A + + A+ + A+IE +H SLIHDD+ +D+ RR PT+ Sbjct: 57 GGKLLRPAYQLLFSAYGSDKDREKAVALAASIEMLHTASLIHDDI--VDHADTRRKLPTI 114 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ AG+ L F++++ + +K S M S + L G LG QM Sbjct: 115 RSEFGNDVAVYAGDYLFVCCFKLMADYASSMK----SLQMNSRSMEKILAGELG-QMSKR 169 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D + + KT L +C GA + S + R GE +G+ FQ+ DD+ Sbjct: 170 YDLSVTVEDYLENIRGKTAELFALSCFIGAYESGTSLRFANQAREIGEAIGLAFQIMDDV 229 Query: 228 LDCEED 233 LD +D Sbjct: 230 LDYSQD 235 >gi|257868135|ref|ZP_05647788.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC30] gi|257874590|ref|ZP_05654243.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC10] gi|257802249|gb|EEV31121.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC30] gi|257808754|gb|EEV37576.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC10] Length = 323 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 8/186 (4%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R ++ + A + + A+ + A+IE +H SLIHDD+ +D+ RR PT+ Sbjct: 41 GGKLLRPAYQLLFSAYGSDKDREKAVALAASIEMLHTASLIHDDI--VDHADTRRKLPTI 98 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ AG+ L F++++ + +K S M S + L G LG QM Sbjct: 99 RSEFGNDVAVYAGDYLFVCCFKLMADYASSMK----SLQMNSRSMEKILAGELG-QMSKR 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D + + KT L +C GA + S + R GE +G+ FQ+ DD+ Sbjct: 154 YDLSVTVEDYLENIRGKTAELFALSCFIGAYESGTSLRFANQAREIGEAIGLAFQIMDDV 213 Query: 228 LDCEED 233 LD +D Sbjct: 214 LDYSQD 219 >gi|78212668|ref|YP_381447.1| trans-hexaprenyltranstransferase [Synechococcus sp. CC9605] gi|78197127|gb|ABB34892.1| Trans-hexaprenyltranstransferase [Synechococcus sp. CC9605] Length = 323 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 91/184 (49%), Gaps = 11/184 (5%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +V + +L L+ R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLLSRALSEQGELSPRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH ++D A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFDARVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLYRFDTA 161 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +++++ KT +L+ +C + +++ + + + L FG LG+ FQ+ D Sbjct: 162 QTFETYLEKSYC------KTASLIANSCRAAGVLSGCAPTQLDSLYQFGRQLGLAFQVVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|255020838|ref|ZP_05292894.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC 51756] gi|254969629|gb|EET27135.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC 51756] Length = 322 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 10/206 (4%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 H Q Q + A+ L+ GGK++R ++ A + + + A +E IH +L Sbjct: 22 HEQIQSGVPTIPAMGAYLINAGGKRLRPIILLLAARMGGERGPRPIPLAAVVEFIHSATL 81 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D +RR T + + A++ G+ L +FE++ ++R Sbjct: 82 LHDDV--VDGSELRRNHATANQLWGNAAAVLVGDFLYARSFEMMVE-----DGDMRIMAT 134 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 ++ ++ QG + Q+ + D +D F + KT L A GAI+ ++ Sbjct: 135 MAEATSVISQGEVA-QLENADDPDLDAEAYFAVIAAKTAKLFEAAARIGAIVNAMEPEQE 193 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 L +G +G+ FQL DD LD + + Sbjct: 194 LALARYGSLVGVAFQLMDDALDYQAE 219 >gi|12231184|dbj|BAB20976.1| putative GGPP synthase [Sonchus oleraceus] Length = 126 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 3/126 (2%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIG 155 N RRGKPT HI Y E A++AG+ LL+++FE I+ T+ + R + + L IG Sbjct: 1 NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHIAYMATKGVSSDRILRAIGELAKCIG 60 Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E D + I KT AL+ + GAIM S E E+L+ Sbjct: 61 SEGLVAGQVVDICSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLQNL 120 Query: 214 GENLGI 219 + LG Sbjct: 121 RDRLGF 126 >gi|254414461|ref|ZP_05028227.1| solanesyl diphosphate synthase [Microcoleus chthonoplastes PCC 7420] gi|196178691|gb|EDX73689.1| solanesyl diphosphate synthase [Microcoleus chthonoplastes PCC 7420] Length = 323 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 17/187 (9%) Query: 49 GGKKIRSFLV------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R +V T S H R+ E IH SL+HDD+ +D +RR Sbjct: 44 GGKRVRPAIVLLIARATVLDSDITPRHR---RLAEITEMIHTASLVHDDV--VDESSVRR 98 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 PTV+ ++ A++AG+ L + +++ + SQ++ + QG+ Sbjct: 99 NVPTVNSMFNNRVAVLAGDFLFGQSAWYLANLNNLEVVKLLSQVIKDMAEGEIQQGLTRF 158 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + D ++++T KT +L+ + +S +++ S E L +G +LG+ FQ Sbjct: 159 EASTTIDTYLEKTY------KKTASLIANSSKSAGLLSGVSAEVAENLYRYGNHLGLAFQ 212 Query: 223 LADDLLD 229 + DD+LD Sbjct: 213 IVDDILD 219 >gi|31794563|ref|NP_857056.1| polyprenyl synthetase IdsB [Mycobacterium bovis AF2122/97] gi|121639307|ref|YP_979531.1| putative polyprenyl synthetase idsB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148824590|ref|YP_001289344.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis F11] gi|215405406|ref|ZP_03417587.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 02_1987] gi|215428885|ref|ZP_03426804.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92] gi|215432351|ref|ZP_03430270.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054] gi|219559456|ref|ZP_03538532.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17] gi|224991804|ref|YP_002646493.1| putative polyprenyl synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800429|ref|YP_003033430.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 1435] gi|254365996|ref|ZP_04982041.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis str. Haarlem] gi|260188437|ref|ZP_05765911.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A] gi|260202541|ref|ZP_05770032.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46] gi|260206746|ref|ZP_05774237.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85] gi|289444961|ref|ZP_06434705.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46] gi|289449079|ref|ZP_06438823.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A] gi|289555659|ref|ZP_06444869.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 605] gi|289571618|ref|ZP_06451845.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17] gi|289576114|ref|ZP_06456341.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85] gi|289747205|ref|ZP_06506583.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis 02_1987] gi|289752097|ref|ZP_06511475.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92] gi|289755512|ref|ZP_06514890.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054] gi|297636043|ref|ZP_06953823.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 4207] gi|297733042|ref|ZP_06962160.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN R506] gi|306805203|ref|ZP_07441871.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu008] gi|306969495|ref|ZP_07482156.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu009] gi|313660374|ref|ZP_07817254.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN V2475] gi|31620159|emb|CAD95588.1| POSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE) (POLYPRENYL DIPHOSPHATE SYNTHASE) [Mycobacterium bovis AF2122/97] gi|121494955|emb|CAL73441.1| Possible polyprenyl synthetase idsB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151509|gb|EBA43554.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis str. Haarlem] gi|148723117|gb|ABR07742.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis F11] gi|224774919|dbj|BAH27725.1| putative polyprenyl synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321932|gb|ACT26535.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 1435] gi|289417880|gb|EFD15120.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46] gi|289422037|gb|EFD19238.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A] gi|289440291|gb|EFD22784.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 605] gi|289540545|gb|EFD45123.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85] gi|289545372|gb|EFD49020.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17] gi|289687733|gb|EFD55221.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis 02_1987] gi|289692684|gb|EFD60113.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92] gi|289696099|gb|EFD63528.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054] gi|308348256|gb|EFP37107.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu008] gi|308352981|gb|EFP41832.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu009] gi|328460161|gb|AEB05584.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 4207] Length = 350 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 24/223 (10%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 + I+++ + L H+ + DR +A GK R+ LV A+ + A Sbjct: 37 RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+ L A I+ Sbjct: 93 PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL-- 148 Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 T L D IR M L IG +L GQ D+++ + KT Sbjct: 149 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 200 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 AL C GA++A+A L FG LG+ FQ DDL+ Sbjct: 201 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 243 >gi|296119175|ref|ZP_06837745.1| trans-hexaprenyltranstransferase [Corynebacterium ammoniagenes DSM 20306] gi|295967801|gb|EFG81056.1| trans-hexaprenyltranstransferase [Corynebacterium ammoniagenes DSM 20306] Length = 366 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 15/184 (8%) Query: 49 GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+ R S L +E S + ++ +E +H +L HDD+ MD RRG Sbjct: 87 GGKRFRPIMSLLSSEFGSEPGSEKV--IKAATVVEMVHVATLYHDDV--MDEADRRRGVE 142 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + + +++ AI+AG+ LL +A ++S T + + +T ++ +G Sbjct: 143 SANSRWNNSVAILAGDALLAHASRLMSQLDTHTVEQFAATFEELVTGQ--MRETVGAGEA 200 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D ++ +IQ+ KT L+ A GA + A + E LR G +G++FQ+ D Sbjct: 201 NPIDHYMK-----VIQE-KTAVLIASAGYFGAYHSGAPKEHAEALRTIGGAIGMVFQIVD 254 Query: 226 DLLD 229 D++D Sbjct: 255 DIID 258 >gi|116203433|ref|XP_001227527.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88175728|gb|EAQ83196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 452 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 21/166 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG P+ ++++ A++AG+ LL A ++ Sbjct: 194 RLAEITELIHTASLLHDDV--IDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 250 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--------VFMIQK--M 183 +R ++ L + + ++ G+ + +++ DET + +QK + Sbjct: 251 -------RLRHAEVIELLATV-IANLVEGEFMQLKNTARDETNPQWSEDALTYYLQKTYL 302 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ +C + A++ A + +G NLG+ FQL DDLLD Sbjct: 303 KTASLISKSCRAAALLGGADAQTVDAAYSYGRNLGLAFQLVDDLLD 348 >gi|327543259|gb|EGF29692.1| polyprenyl synthetase [Rhodopirellula baltica WH47] Length = 616 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 27/246 (10%) Query: 2 NGGLPSKLQENSKRID------TILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIR 54 NG P+ E + ID TI D L + H + ++ Y A++GG Sbjct: 254 NGARPAVTPEQLEGIDPIAATETIALDFLARGGKHSRP-----FITLAAYDAMMGGDGTG 308 Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 + + + N R +IE H SL+HDD+ D R G+P VH ++ Sbjct: 309 A----DGEDVLNRVPDAVRRAALSIETFHKASLVHDDI--EDGDAFRYGQPAVHQRFGTA 362 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-----THNIGLQGMLGGQML--DI 167 TAI G+ L+ + ++S + + D++ ++ + L ++ L G ++L D Sbjct: 363 TAINVGDYLIGLGYRLLS--RNMMGDDVDAETRVDLLDSLAAAHVRLSEGQGAELLWRDA 420 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D + I +KT A SG MA + + +R F NLG+ FQ+ +DL Sbjct: 421 KDRRLTPLDALKIYALKTSPAFEAALYSGVRMAGDASALIDPIRKFSRNLGVAFQIINDL 480 Query: 228 LDCEED 233 D D Sbjct: 481 NDWAGD 486 >gi|227832180|ref|YP_002833887.1| putative polyprenyl diphosphate synthase [Corynebacterium aurimucosum ATCC 700975] gi|262183968|ref|ZP_06043389.1| putative polyprenyl diphosphate synthase [Corynebacterium aurimucosum ATCC 700975] gi|227453196|gb|ACP31949.1| putative polyprenyl diphosphate synthase [Corynebacterium aurimucosum ATCC 700975] Length = 334 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 17/192 (8%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRG 103 +L GGK+ R + AS F + V AA +E +H +L HDD+ MD RRG Sbjct: 52 SLAGGKRFRPMMAL-LASEFGERSQSPEVVKAATVVEMVHVATLYHDDV--MDEAERRRG 108 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + + ++ AI+AG+ LL +A ++S T ++ + ++ GQ Sbjct: 109 VDSANFRWTNSVAILAGDALLAHASRLMSQLDTHTVEHFAETF----------EELVTGQ 158 Query: 164 MLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 M + E + + KT L+ A GA A A + E LR G +G+IF Sbjct: 159 MRETIGAGEANAVEHYTAVIREKTAVLIASAGYLGAYHAGAGPEQCEALRQIGAAVGMIF 218 Query: 222 QLADDLLDCEED 233 Q+ DD++D D Sbjct: 219 QIVDDVIDIFSD 230 >gi|159903572|ref|YP_001550916.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9211] gi|159888748|gb|ABX08962.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9211] Length = 323 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 45/201 (22%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR +V + +V+ L++ R+ E IH SL+HDD+ +D RRG P Sbjct: 44 GGKRIRPGIVLLLSRALSVDGELSSRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +++ A++AG+ L A L+ +N+ + +L ++ Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQA-----------------SWHLANLNNLDVVKLLSRVIM 144 Query: 166 DIQDEFI-------DETQVFMIQKMKTGALMCFACESGAIMAHASQN-------EKERLR 211 D+ D I D Q F K+ C++ +++A++SQ KE+L Sbjct: 145 DLADGEIKQGLYRFDAGQSFSTYLEKS------YCKTASLIANSSQAVGVLNDLPKEKLN 198 Query: 212 C---FGENLGIIFQLADDLLD 229 FG+ LG+ FQ+ DD+LD Sbjct: 199 SLYHFGKQLGLAFQVVDDILD 219 >gi|332291133|ref|YP_004429742.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5] gi|332169219|gb|AEE18474.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 325 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 94/186 (50%), Gaps = 18/186 (9%) Query: 50 GKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R V A + N VN T R + IE IH SL+HDD+ +D+ IRRG + Sbjct: 45 GKQMRPMFVFLTAKMMNNGEVNDRT-YRGASVIELIHTASLVHDDV--VDDSNIRRGFFS 101 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ + A++ G+ L + ++S DN + L+ ++ + ++ + G++L Sbjct: 102 LNALWKNKIAVLVGDFLFSKGL-LLSI------DNGDTDLLQIIS--VAVREISEGELLQ 152 Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+ I E + I + KT L+ C GA HA E +R+ FGE +G+ FQ+ Sbjct: 153 IEKARKLDITEDLYYEIIRQKTATLIAACCAMGACAVHAKDKEVKRMHKFGELIGMAFQI 212 Query: 224 ADDLLD 229 DDL D Sbjct: 213 KDDLFD 218 >gi|299738690|ref|XP_001834728.2| decaprenyl-diphosphate synthase subunit 1 [Coprinopsis cinerea okayama7#130] gi|298403425|gb|EAU87176.2| decaprenyl-diphosphate synthase subunit 1 [Coprinopsis cinerea okayama7#130] Length = 505 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 26/176 (14%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T +R+ +E +H SL+HDD+ +D +RRG + + +++ GN +L A Sbjct: 194 TQVRLAQIVEMLHTASLLHDDV--IDESALRRGAASAPSAFGNKQSVLGGNFVLGRASAA 251 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-------- 182 +S +L D +QL+ + N ++ G++L +++ +D + Q+ Sbjct: 252 LS----RLGDPEVTQLIAGVLSN-----LVEGEILQLKEIQLDGSPETASQRRQDAWNIY 302 Query: 183 -----MKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDCE 231 +KT +LM S ++ + E KE +G NLGI FQL DD+LD E Sbjct: 303 LHKTYLKTASLMAKGARSAVVLGGCKEGEIWKEIAYAYGRNLGIAFQLVDDVLDYE 358 >gi|326336630|ref|ZP_08202798.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691100|gb|EGD33071.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 327 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 37/200 (18%) Query: 50 GKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R V A L + +N T R A IE IH +L+HDD+ +D+ RRG + Sbjct: 46 GKQMRPMFVFLVAKLISNGIINERT-YRGAAVIELIHTATLVHDDV--VDDSNKRRGFFS 102 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQ 157 ++ + A++ G+ LL+ L+LS+ +N + ++ Sbjct: 103 INALWKNKIAVLVGDYLLSKG------------------LLLSIDNNDFDLLKIISVAVR 144 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKERLRCF 213 M G++L ++ I E + I + KT L+ C GA +A + E++R F Sbjct: 145 EMSEGELLQMEKARRLDITEEVYYEIIRQKTATLIAACCAMGACSVAPENTTLIEKMRLF 204 Query: 214 GENLGIIFQLADDLLDCEED 233 GE +G+ FQ+ DDL D E+ Sbjct: 205 GECVGMAFQIKDDLFDYTEE 224 >gi|170587658|ref|XP_001898591.1| Polyprenyl synthetase family protein [Brugia malayi] gi|158593861|gb|EDP32455.1| Polyprenyl synthetase family protein [Brugia malayi] Length = 394 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 87/161 (54%), Gaps = 16/161 (9%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ E IH SL+HDD+ +D IRRG T++ + A++ G+ +L A +++ S Sbjct: 140 KIAVISEMIHTASLVHDDV--IDKADIRRGSRTINALWGNKMAVLVGDFILARATQVLCS 197 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVF---MIQKM-KTGAL 188 I ++S+ I ++ ++ G+ + + D ++ TQ F M + KT +L Sbjct: 198 --------IGRPSVISVMATI-IEDLVKGEFMQMNDGTDLNATQRFNKYMAKTYSKTASL 248 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +C+S A+++ S+ ++ +G++LGI FQ+ DDLLD Sbjct: 249 FANSCKSAAMLSDVSEADELSAYEYGKSLGIAFQMIDDLLD 289 >gi|294085837|ref|YP_003552597.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665412|gb|ADE40513.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum marinum IMCC1322] Length = 357 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 14/190 (7%) Query: 49 GGKKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R + A + + N + A+++ A+E IH +L+HDD+ +D +RRG+ Sbjct: 69 GGKRMRPLMTLAGARIASPNTTSCSVAAIKLATAVEFIHSATLLHDDV--IDESNMRRGQ 126 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 T + + +++ G+ L AFE+ + S + + S I + G Sbjct: 127 DTANALWGNDASVLVGDFLFARAFELMVESGNIDVLGTLSSASARITEAEIKQMTVAGNP 186 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 ++D ++D + + KT L A SGA ++ A + + + +G NLG+ FQ+ Sbjct: 187 DTRLED-YLD------VIEGKTAILFAAAAASGARISGADEQITQAMHMYGLNLGLAFQI 239 Query: 224 ADDLLDCEED 233 DD LD D Sbjct: 240 MDDALDYTAD 249 >gi|153951500|ref|YP_001398431.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. doylei 269.97] gi|152938946|gb|ABS43687.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp. doylei 269.97] Length = 297 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 24/216 (11%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +D+L+ Q + + +LS ++ GKK+RS L+ A + A ++ A I Sbjct: 4 IDELIKQFLQELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAVI 55 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D +RRG +V+ ++ A++ G+ L + AF +S + Sbjct: 56 ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFA 113 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197 S+ + ++ +G M +D+ ++F I++ + KT L+ + GA Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+A + + +G+NLG+ FQ+ DD+LD + D Sbjct: 165 ILAGLYEQD---FAEYGKNLGLAFQMIDDILDIKSD 197 >gi|238026152|ref|YP_002910383.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1] gi|237875346|gb|ACR27679.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1] Length = 332 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPALLLLVAGALGDGSSHRHTLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 111 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE++ + + KT L + GA++A A + + +G +G FQ+ DD L Sbjct: 165 DADVDESRYMQVIRYKTAKLFEASARLGAVLAGADASTEAAAAEYGRRIGTAFQIMDDWL 224 Query: 229 D 229 D Sbjct: 225 D 225 >gi|119490906|ref|ZP_01623189.1| solanesyl diphosphate synthase [Lyngbya sp. PCC 8106] gi|119453724|gb|EAW34883.1| solanesyl diphosphate synthase [Lyngbya sp. PCC 8106] Length = 323 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 8/156 (5%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D +RRG PTVH ++ A++AG+ L + +++ Sbjct: 72 RLAEITEMIHTASLVHDDV--VDESELRRGSPTVHSLFNNRIAVLAGDFLFAQSSWYLAN 129 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + S++++ L QG L+ D + KT +L+ + Sbjct: 130 LDNLEVVKLLSKVIMDLAEGEIQQG------LNRFDTGMSINAYLEKSYYKTASLVANSS 183 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ +++ S E L +G+NLG+ FQ+ DD+LD Sbjct: 184 KAAGLLSGVSAELAEDLYSYGQNLGLAFQIVDDILD 219 >gi|15842975|ref|NP_338012.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|254233984|ref|ZP_04927309.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis C] gi|308370246|ref|ZP_07666898.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu002] gi|308371326|ref|ZP_07667135.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu003] gi|308372523|ref|ZP_07667397.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu004] gi|308373727|ref|ZP_07667640.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu005] gi|308374857|ref|ZP_07667880.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu006] gi|308376100|ref|ZP_07668191.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu007] gi|13883314|gb|AAK47826.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|124599513|gb|EAY58617.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis C] gi|308324901|gb|EFP13752.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu002] gi|308329132|gb|EFP17983.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu003] gi|308332967|gb|EFP21818.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu004] gi|308336584|gb|EFP25435.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu005] gi|308340457|gb|EFP29308.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis SUMu006] gi|308344324|gb|EFP33175.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu007] Length = 354 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 24/223 (10%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 + I+++ + L H+ + DR +A GK R+ LV A+ + A Sbjct: 41 RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 96 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+ L A I+ Sbjct: 97 PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL-- 152 Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 T L D IR M L IG +L GQ D+++ + KT Sbjct: 153 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 204 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 AL C GA++A+A L FG LG+ FQ DDL+ Sbjct: 205 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 247 >gi|13383247|dbj|BAB39474.1| putative GGPP synthase 3 [Metaplexis japonica] Length = 127 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 3/127 (2%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRGKPT H Y E A++AG+ LL +AFE I + +++ L IG Sbjct: 1 NDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIVTATKGASSEQLVRVIEELAKCIGS 60 Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E I + + I KT AL+ + GAI+ A+ + +LR F Sbjct: 61 EGLVAGQVVDICSEGISDVGLEHLEFIHLHKTAALLEGSVVLGAILGGANDVQISKLRKF 120 Query: 214 GENLGII 220 +G++ Sbjct: 121 ARCIGLL 127 >gi|19112068|ref|NP_595276.1| decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces pombe 972h-] gi|20137618|sp|O43091|DPS1_SCHPO RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName: Full=All-trans-decaprenyl-diphosphate synthase subunit 1; AltName: Full=Decaprenyl pyrophosphate synthase subunit 1 gi|1845555|dbj|BAA12314.1| decaprenyl diphosphate synthase subunit 1 [Schizosaccharomyces pombe] gi|6714819|emb|CAB66154.1| decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces pombe] Length = 378 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 18/165 (10%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 LR+ E IH SL+HDD+ +D+ +RRG P+ ++ + +I+AGN +L A S Sbjct: 120 LRLAQITEMIHIASLLHDDV--IDHANVRRGSPSSNVAFGNRRSILAGNFILARA----S 173 Query: 133 SPKTQLKDNIRSQLMLSLTHNI------GLQGMLGGQMLDIQDEFIDETQVFMIQK--MK 184 + +L++ ++L+ ++ ++ L+ + L+I+ D + I+K +K Sbjct: 174 TAMARLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSLEIKQSNFD----YYIEKSFLK 229 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T +L+ +C++ I+ S +G +G FQL DD+LD Sbjct: 230 TASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLD 274 >gi|227488516|ref|ZP_03918832.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glucuronolyticum ATCC 51867] gi|227543121|ref|ZP_03973170.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091410|gb|EEI26722.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181109|gb|EEI62081.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glucuronolyticum ATCC 51866] Length = 358 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 32/210 (15%) Query: 45 YALLGGKKIRSFLVTE--CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 + + GGK++R + ++ R +++E I +LIHDD+ +D RR Sbjct: 44 FVVSGGKRVRPLYAWAGYVGGGGDESNTAVQRACSSLEFIQACALIHDDI--IDASDTRR 101 Query: 103 GKPTVH--------------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 G PTVH ++ AI+ G+ L +A ++ +L D + Sbjct: 102 GNPTVHRRMETYLRDYPGFSGPTERAAEFGTSVAILIGDLALVWAEDMFMESGVELSDLM 161 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGAL-MCFACESGAI 198 R++ N ++GGQ+LDI E + ET +++ KT + + + G + Sbjct: 162 RARPAW----NAMRAEVIGGQILDISAEAVGETSEDTARRVNIYKTASYTITRPLQIGGL 217 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLL 228 +A + E +G NLGI FQL DDLL Sbjct: 218 LAGVDDSTLEAFAGYGRNLGIAFQLRDDLL 247 >gi|126434936|ref|YP_001070627.1| polyprenyl synthetase [Mycobacterium sp. JLS] gi|126234736|gb|ABN98136.1| Polyprenyl synthetase [Mycobacterium sp. JLS] Length = 386 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%) Query: 45 YALLGGKKIRSFL-VTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 Y GGK +R L + C L L A L A +E H LIHDD+ D + RR Sbjct: 50 YPRRGGKALRPALSIAVCLGLGG--QLDAILPTAATLELYHNAFLIHDDI--EDESWWRR 105 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GKPT+HI + A+ G+ +L+ + + + ++ +++ ++ H + + G Sbjct: 106 GKPTMHIDHGIPIAVNVGDAMLSLSLQPLLDNVERIGLGPALRILRAVAHMT--RRTVEG 163 Query: 163 QMLDIQ-----DEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGEN 216 Q ++++ +D+ + ++KT ++GAI A N E L G + Sbjct: 164 QAIELEWVRSNAWRLDDADYLTMVELKTSWYSFITPLQAGAIAAGVDPNRLEPLESLGRH 223 Query: 217 LGIIFQLADDLLDCEED 233 LG FQ+ DDLL+ D Sbjct: 224 LGAAFQITDDLLNLRAD 240 >gi|319953718|ref|YP_004164985.1| trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237] gi|319422378|gb|ADV49487.1| Trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237] Length = 325 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 18/186 (9%) Query: 50 GKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R V + L N VN T R + IE IH +L+HDD+ +D RRG + Sbjct: 45 GKQMRPMFVFLTSKLINNGEVNERT-YRGASVIELIHTATLVHDDV--VDESNKRRGFFS 101 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ + A++ G+ LL+ ++S DN L+ ++ + ++ M G++L Sbjct: 102 INALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLKIIS--VAVREMSEGELLQ 152 Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+ I E + I + KT L+ C GA E E R FGE G+ FQ+ Sbjct: 153 IEKARRLDITEAIYYEIIRQKTATLIAACCSLGACSVKPDSEEVEVFRKFGEYCGMAFQI 212 Query: 224 ADDLLD 229 DDL D Sbjct: 213 KDDLFD 218 >gi|124023595|ref|YP_001017902.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9303] gi|123963881|gb|ABM78637.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9303] Length = 323 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 19/188 (10%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +V + + + L+A R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLISRALSADGDLSARHRRLAEITEMIHTASLVHDDV--VDEAATRRGVA 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +++ A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDNLAVVKLLSRVIMDLADGEVKQGLYR---- 157 Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D Q F ++K KT +LM + ++ +++ S ++ L FG LG+ F Sbjct: 158 ------YDTGQSFATYLEKSYCKTASLMANSVQAAGVLSGESVEHQKSLHHFGRQLGLAF 211 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 212 QVVDDILD 219 >gi|307175359|gb|EFN65378.1| Decaprenyl-diphosphate synthase subunit 1 [Camponotus floridanus] Length = 337 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 26/234 (11%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL 64 P +L E+ + + DD+ L+ ++ TQ + +S Y L G GK IR L A Sbjct: 16 PYRLAEDD--LKDMFDDIRLELITNT-TQEELQPIST--YYLDGQGKAIRPILTILMARA 70 Query: 65 FN-------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 N ++H + ++ E IH SL+HDD+ +D IRRGKP+V++ + + Sbjct: 71 INYHKGRNVLSH-SQRQIAMISEMIHSSSLLHDDV--IDQSDIRRGKPSVNVVWSQKKVA 127 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 +AG+ +L A ++S + SQ++ L +Q LG + E +E Sbjct: 128 MAGDYILAVACRMLSRLQNDEVTITISQIVTDLVQGEFMQ--LGSK------ETENERFA 179 Query: 178 FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + K KT +L+ ++ AI+A + E +G N+G+ FQL DDLLD Sbjct: 180 HYLTKTYRKTASLIANCSKAVAILAEVDDHMIEMAFQYGRNVGLAFQLVDDLLD 233 >gi|220932319|ref|YP_002509227.1| heptaprenyl diphosphate synthase component II [Halothermothrix orenii H 168] gi|219993629|gb|ACL70232.1| heptaprenyl diphosphate synthase component II [Halothermothrix orenii H 168] Length = 326 Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 18/190 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A L + + + +AIE +H +L+HDD+ +D IRRG+ + Sbjct: 47 GGKRLRPLLVVLSARLGDFDKEKIYHIASAIELLHMATLVHDDI--IDEARIRRGEISAQ 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ + A+ G+ +L+ AF+I + ++ + L +GL + G++ + Sbjct: 105 SKFGKDVAVFLGDFMLSRAFDIFTLYLSR-------HSLRKLNKVVGL--ICEGEIDQYE 155 Query: 169 DEFIDETQVFMIQ-----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D+F E +V + + + KT L + GA + + FG LG FQ+ Sbjct: 156 DKF--EYKVSIREYLRRIRRKTALLFGLSTYIGAYESGVRGRNLSNIYRFGLRLGTAFQI 213 Query: 224 ADDLLDCEED 233 DD+LD D Sbjct: 214 QDDILDFVAD 223 >gi|317420115|emb|CBN82151.1| Decaprenyl-diphosphate synthase subunit 1 [Dicentrarchus labrax] Length = 422 Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 19/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNH------LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRR 102 GK IR +V A N++ L R A I E IH SL+HDD+ +D RR Sbjct: 140 GKAIRPIIVILMARALNIHSNRAGDLLPGQRALAMISEMIHTASLVHDDV--IDGSDKRR 197 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK T++ + E AI+AG+ +L+ A +++ + SQ++ L +Q LG Sbjct: 198 GKRTINDMWGERKAILAGDLILSAASVLLARIGNNAVVKVMSQVIEDLVRGEFMQ--LGS 255 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +I+ + E +G+N+GI Sbjct: 256 K------ENENERFKHYLEKTFKKTASLIANSCKAVSILVTSDPEVHEIAYQYGKNVGIA 309 Query: 221 FQLADDLLD 229 FQL DD+LD Sbjct: 310 FQLVDDVLD 318 >gi|292493567|ref|YP_003529006.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4] gi|291582162|gb|ADE16619.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4] Length = 329 Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 77/180 (42%), Gaps = 5/180 (2%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R LV + AL AIECI SLIHDD +D IRR +P Sbjct: 44 GKRVRGCLVCLINNALGGKTEDALPRAIAIECIQAASLIHDDY--VDEDIIRRKRPATWT 101 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 A++ G+ + +A I S + +D ++ N G L QM + Sbjct: 102 VEGPRRAVLLGD--VIFATAIQSMVELGNEDGATVARAIATVAN-GAYQELSWQMDGGEA 158 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ I +KTGAL AC+ GAI A Q FG G +Q+ADDL D Sbjct: 159 NLLEAGIYDRIIYLKTGALFGAACQLGAIATGAPQETSASAYAFGTRTGEAYQIADDLQD 218 >gi|254552488|ref|ZP_05142935.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 247 Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 24/223 (10%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 + I+++ + L H+ + DR +A GK R+ LV A+ + A Sbjct: 4 RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 59 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+ L A I+ Sbjct: 60 PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL-- 115 Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 T L D IR M L IG +L GQ D+++ + KT Sbjct: 116 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 167 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 AL C GA++A+A L FG LG+ FQ DDL+ Sbjct: 168 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 210 >gi|33240492|ref|NP_875434.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238020|gb|AAQ00087.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 323 Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 17/191 (8%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L+++ S R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRIRPGIVLLISKALSAEGELSSKHRRLAEITEMIHTASLVHDDV--LDEASTRRGVD 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML---GG 162 TVH ++D A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHNRFDHKVAVLAGDFLFAQASWHLANLDNLDVVKLLSRVIMDLAEGEVKQGIYRFDPN 161 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q LD+ +++++ KT +L+ + ++ ++++ S + L FG+ LG+ FQ Sbjct: 162 QSLDV---YLEKSYC------KTASLIANSAQAVGVLSNESDYHLKCLYNFGKQLGLAFQ 212 Query: 223 LADDLLDCEED 233 + DD+LD D Sbjct: 213 VVDDILDFTSD 223 >gi|330815463|ref|YP_004359168.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3] gi|327367856|gb|AEA59212.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3] Length = 332 Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 80/155 (51%), Gaps = 8/155 (5%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +FE++ Sbjct: 79 LAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGV 136 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 +R +LS I +G + Q+L++ D +DE++ + + KT L + Sbjct: 137 G-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDESRYMQVIRYKTAKLFEASAR 190 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA++A A + + +G +G FQ+ DD LD Sbjct: 191 LGAVLAGADASTEAAAAEYGRRIGTAFQIMDDWLD 225 >gi|84394037|ref|ZP_00992774.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01] gi|84375323|gb|EAP92233.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01] Length = 323 Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 110/224 (49%), Gaps = 12/224 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNVNH 69 K I T+ + + + +Q Q N L++ + + ++ GGK++R L A Sbjct: 4 KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F+ Sbjct: 64 EAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQ 121 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++++ + ++ ++S N+ +G + Q+++ + E + KT L Sbjct: 122 MMTTLGS-----LKILELMSEAVNVIAEGEVQ-QLMNCNNPDTTEESYMQVIYSKTARLF 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GAI++ +S + ++ +G+ LG FQL DD++D D Sbjct: 176 EAATQIGAILSESSPEIETAMQNYGKYLGTAFQLIDDVMDYTAD 219 >gi|302536833|ref|ZP_07289175.1| polyprenyl synthetase [Streptomyces sp. C] gi|302445728|gb|EFL17544.1| polyprenyl synthetase [Streptomyces sp. C] Length = 290 Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 17/155 (10%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKT 136 E H ++L+HDD+ +D RRG+PT + AI+AG+ ++ A +++ P + Sbjct: 38 ELAHNFTLLHDDI--IDRDVRRRGRPTAWTVFGTPHAILAGDAMMALALRLLAEDPHPAS 95 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 + ++ L GQ D E + + + KTGAL+ AC Sbjct: 96 ARASARLAACVVELCE---------GQQADCAFEERAHVSLDECLTMAAAKTGALLGCAC 146 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA+ A A E E + FG G+ FQL DDL+ Sbjct: 147 ALGALYAGAGPEEVEAVDAFGREAGLAFQLIDDLI 181 >gi|118468511|ref|YP_888517.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155] gi|118169798|gb|ABK70694.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155] Length = 362 Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 31/209 (14%) Query: 45 YALLGGKKIR-SFLVTECASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGY 99 + L GGK++R +F S+ A LR+ +A+E + +LIHDD+ +D+ Sbjct: 47 FVLRGGKRVRPAFAYWGWRSVIEPADAVAGPDVLRLFSALELLQACALIHDDV--IDDSA 104 Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 RRG PTVH + E AI+AG+ L++A +I++ + + R Sbjct: 105 TRRGLPTVHRLFTEQHHERGWLGSERQFGLSAAILAGDLALSWADDIVAGADLPVDAHRR 164 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGAL-MCFACESGAIM 199 Q ++ +I + +LGGQ LDI E + V + KT + + + GA Sbjct: 165 VQ---TVWRHIRTE-VLGGQYLDIVTESSGDESVASALNVNTFKTASYTVARPLQLGAAA 220 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228 A + +E G +LG+ FQL DD+L Sbjct: 221 AADRPDVQELFHRIGNDLGVAFQLRDDVL 249 >gi|315186534|gb|EFU20293.1| Polyprenyl synthetase [Spirochaeta thermophila DSM 6578] Length = 327 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 17/164 (10%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +R+ AA+E +H +L+HDD+ +D+ RRG +H Y A++ G+ L A E+++ Sbjct: 69 VRLAAALEMLHMATLVHDDI--VDDAATRRGGAALHRAYGVKEAVLMGDLLFAKALELVA 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ------DEFIDETQVFMIQKMKTG 186 ++ S+ G++ +L G++ +++ E + KTG Sbjct: 127 EYASREHAVFLSR---------GVRHILDGEIEEVEVRRALGRESFSLRRYLRRILRKTG 177 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 L A GA A A + RLR G N+G+ FQ+ DD+LD Sbjct: 178 LLFVVAFHLGASEAGAEEEVVRRLRRIGYNVGMAFQVIDDVLDV 221 >gi|308275697|gb|ADO25596.1| Putative polyprenyldiphosphate synthase component [Corynebacterium pseudotuberculosis I19] Length = 339 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 17/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R AS + + ++ ++ +E H +L HDD+ MD RRG + Sbjct: 60 GGKRFRPMFAL-LASQYGDHPVSEDVIKAAVVVEMTHLATLYHDDV--MDEAAKRRGVES 116 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + +++ AI+AG+ LL + +++ T D +R + G ++ GQM + Sbjct: 117 ANARWNNSVAILAGDILLAHVSRLMADLGT---DTVRH-----FSETFG--DLVTGQMRE 166 Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 I D + +M + + KTG L+ A GA+ + A+ + E LR +G +G++FQ+ Sbjct: 167 TIGVGEGDPIEHYMAVIREKTGVLIASAGYLGALHSGATADHIEALRAYGAAIGMVFQIV 226 Query: 225 DDLLDCEED 233 DD++D D Sbjct: 227 DDIIDIFSD 235 >gi|37520322|ref|NP_923699.1| solanesyl diphosphate synthase [Gloeobacter violaceus PCC 7421] gi|35211315|dbj|BAC88694.1| solanesyl diphosphate synthase [Gloeobacter violaceus PCC 7421] Length = 325 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR LV+ + + R+ E IH SL+HDD+ +D +RRG Sbjct: 46 GGKRIRPALVLLVSRATAAYGEPTERHRRLAEITEMIHTASLVHDDV--IDTSAVRRGID 103 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TV+ ++ A++AG+ Y F + S+ +L +L+ + + G +G L L Sbjct: 104 TVNSRFGNRVAVLAGD----YLFGMASAYLARLGSLEVVELLGIVISHFG-EGELLQSTL 158 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + E Q KT +LM + A+++ + E L +G +LGI FQ+ D Sbjct: 159 QFDSDLTFE-QYIDKSFYKTASLMAGTSRAAAVLSESPAAVCEALYEYGRHLGIAFQVID 217 Query: 226 DLLD 229 DLLD Sbjct: 218 DLLD 221 >gi|223938575|ref|ZP_03630466.1| Polyprenyl synthetase [bacterium Ellin514] gi|223892694|gb|EEF59164.1| Polyprenyl synthetase [bacterium Ellin514] Length = 189 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 11/128 (8%) Query: 111 YDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + E A++AG+ LLT AFEI S P+ KD L+L + G ++ GQ+ D Sbjct: 1 FGEGIAVLAGDALLTQAFEIAALSPSWPRYTHKD-----LVLEIARASGSLQLIAGQVAD 55 Query: 167 IQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ E I Q+ I + KT AL+C + G + A+ + + + L FG N+G+ FQ+ Sbjct: 56 LEAEGKRISTAQLKYIHERKTSALLCCSVRLGGMSANCTPAQLKALTDFGYNVGLAFQII 115 Query: 225 DDLLDCEE 232 DD+LD + Sbjct: 116 DDILDVTQ 123 >gi|189464891|ref|ZP_03013676.1| hypothetical protein BACINT_01235 [Bacteroides intestinalis DSM 17393] gi|189437165|gb|EDV06150.1| hypothetical protein BACINT_01235 [Bacteroides intestinalis DSM 17393] Length = 324 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 83/161 (51%), Gaps = 16/161 (9%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L ++E +H SL+HDD+ +D RRG+ +V+ Y+ A++ G+ LL A ++ Sbjct: 68 LHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIYNNKVAVLVGDYLL--ATSLVQ 123 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFIDETQVFMIQKMKTGAL 188 KT + ++ + +G Q + G++L + + +F +E +I+K KT L Sbjct: 124 VGKTH------NYAIIEVVSRLG-QNLSEGELLQLSNVSSLQFSEEVYFDVIRK-KTAVL 175 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +SGA+ + + E R FGE +G+ FQ+ DD+ D Sbjct: 176 FAACTKSGALSVGVTDEQAEFARQFGEYIGLCFQIKDDIFD 216 >gi|313675096|ref|YP_004053092.1| polyprenyl synthetase [Marivirga tractuosa DSM 4126] gi|312941794|gb|ADR20984.1| Polyprenyl synthetase [Marivirga tractuosa DSM 4126] Length = 324 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 14/183 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R V A + + R A IE +H +L+HDD+ +D+ RRG +++ Sbjct: 46 GKQMRPMFVFLSAGVHGQINEATYRGAALIELLHTATLVHDDV--VDDANYRRGFFSINA 103 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + AI+ G+ LL+ ++S DN L+ ++ ++ M G++L I+ Sbjct: 104 LWKNKIAILVGDYLLSRGL-LLSI------DNEDFDLLKIVSE--AVREMSEGELLQIEK 154 Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 I E + I K KT +L+ C G+ + + E+++ FGE +G+ FQ+ DD Sbjct: 155 ARKLNITEDIYYDIIKQKTASLIASCCAVGSRSVNKDDDISEKMKLFGEKVGMAFQIKDD 214 Query: 227 LLD 229 L D Sbjct: 215 LFD 217 >gi|264676899|ref|YP_003276805.1| polyprenyl synthetase [Comamonas testosteroni CNB-2] gi|299529717|ref|ZP_07043154.1| Polyprenyl synthetase [Comamonas testosteroni S44] gi|262207411|gb|ACY31509.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2] gi|298722580|gb|EFI63500.1| Polyprenyl synthetase [Comamonas testosteroni S44] Length = 309 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 30 GGKRLRPALLLLIAGALGHQGKNKYILAAVVELIHTATLLHDDV--VDESTLRRGRATAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ + +R +LS N+ +G + Q+++ Sbjct: 88 ETFGNPASVLVGDFLHTRSFQMMVEVGS-----MRVLQILSDATNVIAEGEVQ-QLINTH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D ++E + + KT L + + A++A A+ ++ +G+ LG FQ+ DD+L Sbjct: 142 DASLNEAGYLHVIRSKTAQLFEASAQLAAVLAGATPEVEQACAAYGQALGTAFQIIDDVL 201 Query: 229 D 229 D Sbjct: 202 D 202 >gi|313205998|ref|YP_004045175.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868] gi|312445314|gb|ADQ81669.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868] gi|315022311|gb|EFT35339.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM] gi|325336561|gb|ADZ12835.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer RA-GD] Length = 325 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 16/184 (8%) Query: 50 GKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK++R CA L +VN T R + IE IH +L+HDD+ +D + RR +++ Sbjct: 46 GKQMRPMFAFLCAKLVGDVNEKT-YRGASMIELIHTATLVHDDV--VDESFKRRNFFSIN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ LL+ + ++S+ DN L+ ++ I + M G++L ++ Sbjct: 103 ALWKNKIAVLVGDYLLSKSV-LLST------DNKDFDLLSVISTTI--REMSEGELLQLE 153 Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 I E + I + KT L+ CE G + + +++R FG G+ FQ+ D Sbjct: 154 KARKLDITEEVYYEIIRQKTATLIAACCEIGVLSNGVDETMAKKMRDFGTYTGMAFQIKD 213 Query: 226 DLLD 229 DL D Sbjct: 214 DLFD 217 >gi|297623348|ref|YP_003704782.1| polyprenyl synthetase [Truepera radiovictrix DSM 17093] gi|297164528|gb|ADI14239.1| Polyprenyl synthetase [Truepera radiovictrix DSM 17093] Length = 338 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 29/242 (11%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 +L E + +D + L QT H LL Y GGK++R L+ + Sbjct: 3 ELSELQRALDEAIFRELPQTHPHPDVSAFYALLR--DYPARGGKRLRGTLLLLSTAAHGA 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L V AA+E + LIHDD+ D+ RRG+P +H A+ G+ L Y Sbjct: 61 PWERGLNVAAALELFQNWVLIHDDI--EDDSEDRRGRPALHRTAGVPVALNVGDALHIYM 118 Query: 128 FEII---------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEF-ID 173 + + ++P+T + + M+S T GQ LD+ + F I Sbjct: 119 WRTLLRELRGDARAAPETLPRLLEAFEWMISRTAE--------GQHLDLTWVAEGRFEIS 170 Query: 174 ETQVFMIQKMKTGALMCFA-CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 E + +KT E GA+ A A + RLR GE+LG+ FQ+ DD+L+ Sbjct: 171 EAAYLEMVTLKTAYYTVVGPLELGALCAGAEPD--PRLRRAGEDLGVAFQIRDDVLNLMA 228 Query: 233 DL 234 D+ Sbjct: 229 DV 230 >gi|183983202|ref|YP_001851493.1| polyprenyl synthetase IdsB_2 [Mycobacterium marinum M] gi|183176528|gb|ACC41638.1| polyprenyl synthetase IdsB_2 [Mycobacterium marinum M] Length = 345 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 10/157 (6%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H +SL+HDD+ MD RRG+ TV + E +AI+ G+ L +++ L Sbjct: 94 ELMHNFSLVHDDV--MDRDVTRRGRATVWTVWGETSAIMLGDALHVLCSRVLAE---MLA 148 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESG 196 + + +L + G+ GQ+ D E V +M KT LM ACE G Sbjct: 149 PEVAMTAIATLESS--FLGLRVGQVDDGDFETPKRVTVDGYLRMAAGKTAGLMGCACELG 206 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A+ A A +R FG +LG+ FQ+ DD++ D Sbjct: 207 ALTAGADPLTVSAMREFGYHLGLAFQILDDIVGIWGD 243 >gi|118085662|ref|XP_418592.2| PREDICTED: similar to PDSS1 protein [Gallus gallus] Length = 366 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 84 GKAFRPMIVVLMARACNIHHSNSREVQASQRSVAIIAEMIHTASLVHDDV--IDDANSRR 141 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++S+ + ++ ++ G Sbjct: 142 GKMTVNQIWGERKAVLAGDFILSAASLALA--------RIGNTTIISVLTQV-IEDLVRG 192 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +I+ E +G+N+GI Sbjct: 193 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPKVHEIAYQYGKNVGI 252 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 253 AFQLIDDVLD 262 >gi|300857719|ref|YP_003782702.1| geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis FRC41] gi|300685173|gb|ADK28095.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis FRC41] gi|302205461|gb|ADL09803.1| Putative polyprenyldiphosphate synthase component [Corynebacterium pseudotuberculosis C231] Length = 339 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 17/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R AS + + ++ ++ +E H +L HDD+ MD RRG + Sbjct: 60 GGKRFRPMFAL-LASQYGDHPVSEDVIKAAVVVEMTHLATLYHDDV--MDEAAKRRGVES 116 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + +++ AI+AG+ LL + +++ T D +R + G ++ GQM + Sbjct: 117 ANARWNNSVAILAGDILLAHVSRLMADLGT---DTVRH-----FSETFG--DLVTGQMRE 166 Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 I D + +M + + KTG L+ A GA+ + A+ + E LR +G +G++FQ+ Sbjct: 167 TIGVGEGDPIEHYMAVIREKTGVLIASAGYLGALHSGATADHIEALRAYGAAIGMVFQIV 226 Query: 225 DDLLDCEED 233 DD++D D Sbjct: 227 DDIIDIFSD 235 >gi|157866922|ref|XP_001682016.1| farnesyl synthetase [Leishmania major strain Friedlin] gi|68125467|emb|CAJ03328.1| putative solanesyl-diphosphate synthase [Leishmania major strain Friedlin] Length = 359 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 13/165 (7%) Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 L LR+ E IH SL+HDD+ +DN RRG+P +H YD A++AG+ +L A Sbjct: 107 LPFLRLAEVTELIHTASLLHDDV--IDNTDTRRGRPALHKVYDAKRAVLAGDYMLARASF 164 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 I++ + ++++ +T L+ + G+++ + D D + KT +L+ Sbjct: 165 YIATLQV-------PRIVILMT--TALEELTSGELMQM-DGCFDIPRYEQKSFCKTASLI 214 Query: 190 CFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + S A++A E+ FG++LGI FQ+ DD LD D Sbjct: 215 ANSLASTAVLAGPGNEALEQTAFDFGKHLGIAFQILDDCLDITGD 259 >gi|71897572|ref|ZP_00679817.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1] gi|71732475|gb|EAO34528.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1] Length = 333 Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L ++ A IE IH +L+HDD+ +D +RR T + Sbjct: 54 GGKRLRPMLTMLAGHAIGHTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSSSTAN 111 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +F+++ T+L + Q++ T+ I +L Q+L + Sbjct: 112 ALWGNAPSVLVGDFLYSRSFQLM----TELANLEVMQILAETTNRISEGEVL--QLLHVH 165 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + DET + + KT L A + GA+ +HA + R+ +G LG FQ+ DD+L Sbjct: 166 NPDTDETTYLSVIERKTAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVL 225 Query: 229 D 229 D Sbjct: 226 D 226 >gi|220928949|ref|YP_002505858.1| polyprenyl synthetase [Clostridium cellulolyticum H10] gi|219999277|gb|ACL75878.1| Polyprenyl synthetase [Clostridium cellulolyticum H10] Length = 318 Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 19/203 (9%) Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T N L+ AI + GGK++R +V + + +++ +AIE +H +LIHDD Sbjct: 24 TSKNKLLVKAIADTVGAGGKRLRPAMVIVSSYFGKIRQENLIQLASAIELLHTATLIHDD 83 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLS 149 + +DN RR TV+ +Y AI G+ L T A +++ P +L R+ Sbjct: 84 V--LDNSPYRRNNETVYKKYGTDMAIYCGDFLYTKALLMLADIVPANKLTIAARA----- 136 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALMCFACESGAIMAHASQNE 206 ++ + G++ +D+++ V K KT L +C GA+ A + Sbjct: 137 ------VKTICEGEVDQYRDKYVMNLSVPSYLKRISRKTAVLFSASCALGALCAKCNPRI 190 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 L G G++FQL DD D Sbjct: 191 TNSLSKLGFYYGVMFQLIDDFRD 213 >gi|227505153|ref|ZP_03935202.1| possible trans-hexaprenyltranstransferase [Corynebacterium striatum ATCC 6940] gi|227198266|gb|EEI78314.1| possible trans-hexaprenyltranstransferase [Corynebacterium striatum ATCC 6940] Length = 334 Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 17/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R + AS F + V AA +E +H +L HDD+ MD RRG + Sbjct: 55 GGKRFRPMMAL-LASEFGARPGSPEVVKAATVVEMVHVATLYHDDV--MDEAERRRGVES 111 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++ AI+AG+ LL +A ++S T ++ + ++ GQM + Sbjct: 112 ANFRWTNSVAILAGDVLLAHASRLMSQLDTHTVEHFSETF----------EELVTGQMRE 161 Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 I + + +M + + KT L+ A GA A A+ + LR G +G+IFQ+ Sbjct: 162 TIGAGEANAVEHYMAVIREKTAVLIASAGYLGAYHAGATPEQAAALRQIGGAIGMIFQIV 221 Query: 225 DDLLDCEED 233 DD++D D Sbjct: 222 DDIIDIFSD 230 >gi|11066676|gb|AAG28699.1|AF272737_2 CrtE [Streptomyces griseus subsp. griseus NBRC 13350] Length = 425 Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 31/207 (14%) Query: 45 YALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 + L GGK++R L S + ALR+G A+E I +LIHDD+ MD +RRG Sbjct: 79 FTLDGGKRVRPRLLWWGMRSCGAADTTAALRLGVALELIQSCALIHDDV--MDRSRLRRG 136 Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 KP VHI + A++AG+ L +A + ++ +T L ++ + + Sbjct: 137 KPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDLALAWADDTVA--ETALS-AVQRRRI 193 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL--MCFACESGAIMAHASQN 205 L + + M+ GQ LD++ + + V Q ++T L ++ E + A Sbjct: 194 GPLWRTMRTE-MVAGQYLDLRGQVRGGSSVE--QALRTACLKSASYSVERPLALGAALAG 250 Query: 206 EKER----LRCFGENLGIIFQLADDLL 228 E LR G GI FQL DDLL Sbjct: 251 ADEATTDALRSAGRCAGIAFQLRDDLL 277 >gi|311111182|ref|ZP_07712579.1| polyprenyl synthetase superfamily [Lactobacillus gasseri MV-22] gi|311066336|gb|EFQ46676.1| polyprenyl synthetase superfamily [Lactobacillus gasseri MV-22] Length = 341 Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 20/164 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ +IE +H +LIHDD+ +D +R G+P++ +Y + A+ AG+ L+ + ++S Sbjct: 82 KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLVALSLTLLS- 138 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190 +N +S L + +Q +L G+ + + I E + K KTG L Sbjct: 139 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFG 191 Query: 191 FAC-----ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AC ESG + ++ K + FGE LG FQL DD+LD Sbjct: 192 LACFIGAYESGTKVTKVTKALKA--KKFGEYLGQAFQLRDDILD 233 >gi|116070412|ref|ZP_01467681.1| Trans-hexaprenyltranstransferase [Synechococcus sp. BL107] gi|116065817|gb|EAU71574.1| Trans-hexaprenyltranstransferase [Synechococcus sp. BL107] Length = 323 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR +V + + LT R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRIRPGIVLLISRALAADGELTQRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH ++D A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFDARVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLY---RF 158 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D F ET F KT +L+ + + +++ + + + L FG LG+ FQ+ D Sbjct: 159 DTSQSF--ET-YFEKSYCKTASLIANSSRAAGVLSECNPQQLDSLYQFGRQLGLAFQVVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|194334004|ref|YP_002015864.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271] gi|194311822|gb|ACF46217.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271] Length = 324 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 14/190 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R LV A + + R +E +H +L+HDD+ +D +RRG +++ Sbjct: 44 GKQVRPLLVMLGAKVCGGVADASYRAAIMVELLHSATLVHDDV--VDGAEMRRGLASINA 101 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ +L+ K + RS M+S ++ M G++L IQ Sbjct: 102 VWKNKIAVLIGDYMLSKGLLYSLDHK-----DYRSLHMVS----DAVRRMSEGEILQIQK 152 Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 I E + KT +L+ +C G + + E LR +GE LG+ FQ+ DD Sbjct: 153 TRSLDISEEDYLKVISDKTASLLSTSCAMGGASVTDDEEKIEALRNYGEFLGLAFQIRDD 212 Query: 227 LLDCEEDLPK 236 LLD D K Sbjct: 213 LLDYTGDSNK 222 >gi|299115852|emb|CBN74415.1| geranyl-diphosphate synthase [Ectocarpus siliculosus] Length = 513 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 29/205 (14%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIH 89 + L GGKKIR +V + N N LR+ E IH SL H Sbjct: 218 FELDGGKKIRPTMVILMSQACNSNSQQVRPDVQPGTELVNPLQLRLAEITEMIHAASLFH 277 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RRG P+V+ + AI+AG+ LL + S +L+ +LM Sbjct: 278 DDV--IDEADTRRGVPSVNKVFGNKLAILAGDFLLARS----SMSLARLRSLESVELM-- 329 Query: 150 LTHNIGLQGMLGGQMLDIQD-EFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNE 206 + ++ ++ G++L ++ E + ++K KTG+LM +C++ A++ Sbjct: 330 ---SAAIEHLVKGEVLQMRPTEDGGGAFEYYVRKNYYKTGSLMANSCKASAVLGQHDLEV 386 Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231 +E +G+ +G+ FQL DD+LD E Sbjct: 387 QEVAFEYGKRVGLAFQLVDDILDFE 411 >gi|188995807|ref|YP_001930059.1| putative polyprenyl synthetase [Porphyromonas gingivalis ATCC 33277] gi|188595487|dbj|BAG34462.1| putative polyprenyl synthetase [Porphyromonas gingivalis ATCC 33277] Length = 324 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 13/183 (7%) Query: 50 GKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK +R L A++ + T L +E IH +LIHDD+ +D RRG PT++ Sbjct: 45 GKHVRPLLTGLVAAVCAGKTNSTTLEAAVLLEMIHTATLIHDDV--IDMASTRRGVPTLN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-QMLDI 167 +D A++ G+ +L+ A + ++IR ++++ +G + G + + Sbjct: 103 AFFDNRVAVLMGDFVLSSAL-----MRAIALNDIR---IITIISQLGRELSEGEIRQFET 154 Query: 168 QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D+ I + ++M + + KT L E GAI A E+++ GE LG FQ+ DD Sbjct: 155 ADKVIIDEDIYMGVIRQKTAMLFSACAEVGAITVQAPVEIVEKVKRVGELLGYAFQIRDD 214 Query: 227 LLD 229 + D Sbjct: 215 IFD 217 >gi|221068969|ref|ZP_03545074.1| Polyprenyl synthetase [Comamonas testosteroni KF-1] gi|220713992|gb|EED69360.1| Polyprenyl synthetase [Comamonas testosteroni KF-1] Length = 309 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 30 GGKRLRPALLLLIAGALGHQGKNKYILAAVVELIHTATLLHDDV--VDESTLRRGRATAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ + +R +LS N+ +G + Q+++ Sbjct: 88 ETFGNPASVLVGDFLHTRSFQMMVEVGS-----MRVLQILSDATNVIAEGEVQ-QLINTH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D ++E + + KT L + + A++A A+ ++ +G+ LG FQ+ DD+L Sbjct: 142 DASLNEAGYLHVIRSKTAQLFEASAQLAAVLAGATPEMEQACATYGQALGTAFQIIDDVL 201 Query: 229 D 229 D Sbjct: 202 D 202 >gi|332286668|ref|YP_004418579.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7] gi|330430621|gb|AEC21955.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7] Length = 308 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R ++ A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 30 GGKRMRPAMLLMMANALGYQGGNHHLLAAVVEFIHTATLLHDDV--VDESDLRRGRSTAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ + + + +LS + +G + Q+L++ Sbjct: 88 AVFGNAASVLVGDYLYSRSFEMMVQSGS-----MPAMSVLSAATTVIAEGEVL-QLLNVH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + + + KT L A + GAI+ A+ ++ +G ++G FQL DD+L Sbjct: 142 DPDVSLDRYLQVVRYKTAKLFEAATQVGAIIGGATTEQEAAAAAYGRHIGTAFQLIDDVL 201 Query: 229 D 229 D Sbjct: 202 D 202 >gi|139439484|ref|ZP_01772916.1| Hypothetical protein COLAER_01942 [Collinsella aerofaciens ATCC 25986] gi|133775037|gb|EBA38857.1| Hypothetical protein COLAER_01942 [Collinsella aerofaciens ATCC 25986] Length = 341 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 11/187 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK+ R + A+ + +A AAIE +LIHDD+ DNG +RRGKP +H Sbjct: 52 AGKRHRPLICMLAATAVGGSFESARSAAAAIEHFQSGALIHDDIA--DNGQLRRGKPCMH 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-- 166 + AI G+ LT + + T L+ +++ +++ LT I + GQ LD Sbjct: 110 LTEGTGLAINCGDLALTMVTKTVLDDPT-LESDVKLRVLHELTEMI--VRTIEGQALDLG 166 Query: 167 -IQDEFID-ETQVFMIQKMKTGALMCFACE--SGAIMAHASQNEKERLRCFGENLGIIFQ 222 ++D D ++ A A +GAI+ S + E LR FG + G+ FQ Sbjct: 167 WVRDGRFDISVDDYLDMATHKTAFYSGATPLAAGAIIGGGSDEQIEALRAFGLHTGLAFQ 226 Query: 223 LADDLLD 229 + DDLL+ Sbjct: 227 IQDDLLN 233 >gi|302330014|gb|ADL20208.1| Putative polyprenyldiphosphate synthase component [Corynebacterium pseudotuberculosis 1002] Length = 339 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 17/189 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R AS + + ++ ++ +E H +L HDD+ MD RRG + Sbjct: 60 GGKRFRPMFAL-LASQYGDHPVSEDVIKAAVVVEMTHLATLYHDDV--MDEAAKRRGVES 116 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + +++ AI+AG+ LL + +++ T D +R + G ++ GQM + Sbjct: 117 ANARWNNSVAILAGDILLAHVSRLMADLGT---DTVRH-----FSETFG--DLVTGQMRE 166 Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 I D + +M + + KTG L+ A GA+ + A+ + E LR +G +G++FQ+ Sbjct: 167 TIGVGEGDPIEHYMAVIREKTGVLIASAGYLGALHSGATADHIEALRAYGAAIGMVFQIV 226 Query: 225 DDLLDCEED 233 DD++D D Sbjct: 227 DDIIDIFSD 235 >gi|116512181|ref|YP_809397.1| geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp. cremoris SK11] gi|116107835|gb|ABJ72975.1| Geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp. cremoris SK11] Length = 319 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R + + +++ L + A++E +H +L+HDD+ +D+ RRG T+ Sbjct: 47 GGKMLRPAYLLLFSGFTDLSESERLALAASVEMMHTATLVHDDV--IDHADTRRGVATLS 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167 +Y A+ AG+ L ++S +L + LT NIG ++ +LGG++ + Sbjct: 105 AKYGPEIAVYAGDYLFIAVIRLMSEHSLELSN---------LTKNIGSIERLLGGELGQL 155 Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 F + +T I+ + KTG L + +++ + K R G N+GI FQ+ Sbjct: 156 NHYFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNALTK-RAYKIGMNIGISFQIM 214 Query: 225 DDLLD 229 DD LD Sbjct: 215 DDYLD 219 >gi|4732024|gb|AAD28559.1|AF118395_1 trans-prenyltransferase [Homo sapiens] Length = 376 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 19/194 (9%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDN 97 Y + GK R +V A N++H + V A+ E IH SL+HDD+ +D+ Sbjct: 89 YFDVKGKAFRPIIVVLMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDD 146 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ Sbjct: 147 ASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ 206 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGE 215 LG + E +E ++K KT +L+ +C++ +++ E +G+ Sbjct: 207 --LGSK------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGK 258 Query: 216 NLGIIFQLADDLLD 229 N+GI FQL DD+LD Sbjct: 259 NVGIAFQLIDDVLD 272 >gi|86606912|ref|YP_475675.1| solanesyl diphosphate synthase [Synechococcus sp. JA-3-3Ab] gi|86555454|gb|ABD00412.1| solanesyl diphosphate synthase [Synechococcus sp. JA-3-3Ab] Length = 323 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 25/225 (11%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 +L++N R+ + +L A H L SA GGK IR +V A Sbjct: 17 RLRQNLSRLVSAKHPILAMAAEH--------LFSA------GGKGIRPAIVLLIARATTP 62 Query: 68 N-HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + +T R+ E IH SL+HDD+ +D +RRG TV+ +D A++AG+ L Sbjct: 63 DGEITPQHWRLAEITEMIHTASLVHDDV--IDTADVRRGIDTVNTLFDNRVAVLAGDYLF 120 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 A +++ DN+ +LS +G + Q L D + + K Sbjct: 121 GQAAWYLAN-----LDNLEVVKLLSKVIMDLPEGEVR-QSLTRFDPDVSLEEYLAKSFYK 174 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T +L+ + ++ +++ S +RL FG +LGI FQ+ DDLLD Sbjct: 175 TASLISGSSKAAGLLSGVSPEVADRLFDFGRDLGIAFQIVDDLLD 219 >gi|290957483|ref|YP_003488665.1| polyprenyl diphosphate synthase [Streptomyces scabiei 87.22] gi|260647009|emb|CBG70108.1| putative polyprenyl diphosphate synthase [Streptomyces scabiei 87.22] Length = 409 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 11/183 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV A+R AA+E +H ++L+HDD+ MD RR + T Sbjct: 125 GKAIRPALVLAAVHALGGRESVAVRAAAAVELVHNFTLLHDDV--MDRDTTRRHRATAWT 182 Query: 110 QYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-L 165 + AI+AG+ + A +++ P + + ++ L L G+ L Sbjct: 183 VFGVPDAILAGDAMQALAQRLLAEDPHPASAAAAARLASCVVELCEGQHTDTELEGRPPL 242 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D+ +DE V + + KTGAL+ AC GA+ A A++ + E L FG G+ FQL D Sbjct: 243 DVT---LDE--VLTMAEAKTGALLGCACAIGALYAGAAEEDVEALDAFGREAGLAFQLID 297 Query: 226 DLL 228 D++ Sbjct: 298 DVI 300 >gi|254818358|ref|ZP_05223359.1| GrcC1 [Mycobacterium intracellulare ATCC 13950] Length = 338 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 24/231 (10%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61 + + +++ RI+ ++D L++A + T+ L A GGK+ R Sbjct: 15 DAAFAATVRDGVGRIEQLMD-TELRSADEIMTESLTHLFKA------GGKRFRPLFTVLS 67 Query: 62 ASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A L N + GA IE +H +L HDD+ MD +RRG PT ++++ AI+AG Sbjct: 68 AQLGPNPDAADVTIAGAVIELVHLATLYHDDV--MDEAEVRRGTPTANVRWGNNVAILAG 125 Query: 121 NGLLTYAFEIIS--SPKT-QLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQ 176 + L A ++S P+ +L +QL+ + GL G G D + Sbjct: 126 DYLFATASRLVSRLGPEAVRLIAETFAQLVTGQMRETRGLTGAAEGA---------DPIE 176 Query: 177 VFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++ + KT L+ A GA+ + A ++ ERL G +G FQ++DD Sbjct: 177 HYLKVVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDD 227 >gi|57242131|ref|ZP_00370071.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter upsaliensis RM3195] gi|57017323|gb|EAL54104.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter upsaliensis RM3195] Length = 297 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 96/187 (51%), Gaps = 22/187 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GKK+RS L+ A A + A IE IH SL+HDD+ +D +RRG +++ Sbjct: 30 GKKLRSKLLLSIAG----ESQKAYVLCAIIELIHLASLLHDDI--IDESELRRGARSINA 83 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 ++ A++ G+ L + AF +S + ++ SQ++ + + + G+++D+ Sbjct: 84 EFGAKNALMLGDILYSKAFYELSKQEAKI-----SQILSNAVCKLAI-----GELMDVNL 133 Query: 169 -DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 +F + + ++ KT L+ + GA++A ++N +G+NLG+ FQ+ DD Sbjct: 134 SKKFNPDKEAYLTMIYHKTAVLIEASARCGALLAKLNEN---AFAEYGKNLGLAFQIVDD 190 Query: 227 LLDCEED 233 +LD D Sbjct: 191 ILDITGD 197 >gi|320334064|ref|YP_004170775.1| trans-hexaprenyltranstransferase [Deinococcus maricopensis DSM 21211] gi|319755353|gb|ADV67110.1| Trans-hexaprenyltranstransferase [Deinococcus maricopensis DSM 21211] Length = 316 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 18/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R L ++ H V A+E +H SL+HDDL +D+ RRG PT Sbjct: 38 GGKRTRPALTYLAFRALGLDAHPQEHDVAVAVELLHSASLLHDDL--IDDADTRRGAPTA 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ V ++++G+ +L+ +++S L +R+ + H + G++L Sbjct: 96 FRRFGNVVSVMSGDYMLSKLLVLLASTTPGL---VRA-FGETAAH------VCEGEVLQF 145 Query: 168 Q----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 Q E+ E + +I KT AL+ A + A++ AS + L FG G+ FQ+ Sbjct: 146 QVAAYGEYSHEHYLNVIYG-KTAALVELAASAPALLVGASDAHQRALADFGREYGMAFQM 204 Query: 224 ADDLLD 229 DDLLD Sbjct: 205 QDDLLD 210 >gi|153807183|ref|ZP_01959851.1| hypothetical protein BACCAC_01461 [Bacteroides caccae ATCC 43185] gi|149130303|gb|EDM21513.1| hypothetical protein BACCAC_01461 [Bacteroides caccae ATCC 43185] Length = 324 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK +R LV A L+ V L ++E +H SL+HDD+ +D RRG+ +V+ Sbjct: 44 SGKMMRPILVLLVARLYGVVSPATLHAAVSLELLHNASLVHDDV--VDESTERRGQLSVN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165 ++ A++ G+ LL A ++ + T S ++ L ++G Q + G++L Sbjct: 102 AIFNNKVAVLTGDYLL--ATSLVHAELTN------SHQIIRLVSSLG-QDLADGELLQLS 152 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ + ET F + + KT AL + A S+ E + R GE +GI FQ+ D Sbjct: 153 NVSNHSFSETVYFDVIRKKTAALFAACTAAAAYSVGVSEEEVKLARLLGEYIGICFQIKD 212 Query: 226 DLLD 229 D+ D Sbjct: 213 DIFD 216 >gi|90416595|ref|ZP_01224526.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium HTCC2207] gi|90331794|gb|EAS47022.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium HTCC2207] Length = 331 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 19/196 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V A L + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 41 GGKRLRPVVVLLSALASGYQGKQHLTMAAVIEFIHTATLLHDDV--VDVSALRRGRETAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Q+ +++ G+ + + AF+++ + D ++ T N+ +G + QM + Sbjct: 99 NQWGNAPSVLVGDFIYSRAFQML----VDVGDMPIMGVIADAT-NLISEGEV-QQMGNAG 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN-----------EKERLRCFGENL 217 + IDE + + KT L A GA++A + + + +G++L Sbjct: 153 NSAIDEATYYEVIYRKTAKLFEAAARIGAMLAAEEADLFVGDSAILDARTDAMAAYGKHL 212 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ADD++D + D Sbjct: 213 GLAFQIADDVMDYQGD 228 >gi|154334614|ref|XP_001563554.1| farnesyl synthetase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134060575|emb|CAM42123.1| putative solanesyl-diphosphate synthase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 359 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 13/165 (7%) Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 L LR+ E IH SL+HDD+ +D+ +RRG+P +H YD A++AG+ +L A Sbjct: 107 LPFLRLAEVTELIHTASLVHDDV--IDSSDMRRGRPALHKVYDTKRAVLAGDYILARASF 164 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 I++ + ++++ +T L+ ++ G++L + D D + KT +L+ Sbjct: 165 YIATLQV-------PRIVILMT--TALEELMSGELLQM-DGCFDIPRYEQKSFCKTASLI 214 Query: 190 CFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + S A++ E+ FG +LGI FQ+ DD LD D Sbjct: 215 SNSLASTAVLVDPGNEALEQTAFDFGRHLGIAFQILDDCLDITGD 259 >gi|114705279|ref|ZP_01438187.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506] gi|114540064|gb|EAU43184.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506] Length = 338 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 9/182 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L A A +++ A++E +H +L+HDD+ +D +RRG+ T Sbjct: 56 GGKRLRPMLTIASALAHGYEEGDAHVKLAASVEFMHTATLLHDDV--VDESDLRRGRRTA 113 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + +++ G+ LL AF+++ + + + +LS + +G + Q+ Sbjct: 114 RTIWGNQASVLVGDYLLGQAFKMMVDVGS-----MAALAILSDASAVIAEGEVW-QLAAA 167 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + E + KT AL A E G ++A S E+E +R +G +LGI FQL DD+ Sbjct: 168 KRMTTSEADYLSVVDAKTAALFAAAAEVGPVIAGKSMREREAMRRYGRSLGISFQLIDDV 227 Query: 228 LD 229 LD Sbjct: 228 LD 229 >gi|153837920|ref|ZP_01990587.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810] gi|149748698|gb|EDM59549.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810] Length = 277 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 8/159 (5%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++ Sbjct: 23 AAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM--- 77 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 T+L QLM S N+ +G + Q+++ D E + KT L A + Sbjct: 78 -TELGSMKILQLM-SNAVNVIAEGEVQ-QLMNCNDPDTTEESYMQVIYSKTARLFESATQ 134 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAI+ A ++ + L+ +G+ LG FQL DD++D D Sbjct: 135 IGAILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSD 173 >gi|145511654|ref|XP_001441749.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409010|emb|CAK74352.1| unnamed protein product [Paramecium tetraurelia] Length = 346 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 95/231 (41%), Gaps = 17/231 (7%) Query: 11 ENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIR---YALL--GGKKIRSFLVTECASL 64 ENSK D IL L Q+ L +I Y L+ GGK+ R A L Sbjct: 12 ENSKSFDKILPKKFELSDPQFSQSDDVKTLSQSISDPIYDLIDRGGKRWRPAFCFLIADL 71 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F H V A +E IH +L+ DD+ D+ +RR VHI+Y A+ A N L Sbjct: 72 FKRAHEELYEVAALVELIHNATLVVDDIE--DDSSVRRNDKCVHIKYGLDVAVNAANYLY 129 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ------DEFIDETQVF 178 + D L +SL++ ++ + GQ DI D E Q Sbjct: 130 FAPLHYFLNSANYSNDQKMKMLEVSLSN---MKIVHFGQAWDIFWHKQVCDIIPTEEQYL 186 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + KTGAL A + I+ + + L F +GI FQ+ DD+L+ Sbjct: 187 KMASYKTGALARMAAQLSCIVLEKDEKIGKALAEFAVQIGIAFQIQDDILN 237 >gi|332524057|ref|ZP_08400309.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176] gi|332315321|gb|EGJ28306.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176] Length = 326 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%) Query: 29 SHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCY 85 +Q ++ D + I+ A GGK +R FL T + ++ A++E +H Sbjct: 24 KRVQVRNTDIQEAIIQLAQAGGKYLRPAFFFLFTSFGPKEKQDSEQLTKIAASLEILHMA 83 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 +LIHDD+ +D+ +RRG+ TV Q+ + A+ G+ L T FE+I + ++ Sbjct: 84 TLIHDDV--IDDSPLRRGQVTVQTQFGKDIAVYTGDFLFTIFFELIL-------ETMQDS 134 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHA 202 +S+ ++ +L G++ + F E + + KT L A GA A Sbjct: 135 PYMSINAK-AMKKILVGELDQMHLYFNQEQSIRDYLRSISGKTAELFRLASLEGAYFGGA 193 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 S + + G ++G+ FQ+ DD+LD E+D K Sbjct: 194 SPDVVSKAGRIGYHIGMTFQILDDILDYTAKEKDFNK 230 >gi|33862665|ref|NP_894225.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9313] gi|33634581|emb|CAE20567.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9313] Length = 323 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 19/188 (10%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +V + + + L+A R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLISRALSADGDLSARHRRLAEITEMIHTASLVHDDV--VDEAATRRGVA 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +++ A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDNLAVVKLLSRVIMDLADGEVKQGLYR---- 157 Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D Q F ++K KT +LM + ++ +++ S ++ L FG LG+ F Sbjct: 158 ------YDTGQSFATYLEKSYCKTASLMANSVQAAGVLSGESVEHQKLLHHFGRQLGLAF 211 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 212 QVVDDILD 219 >gi|22299300|ref|NP_682547.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1] gi|22295483|dbj|BAC09309.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1] Length = 323 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 8/156 (5%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL HDD+ +D +RRG PTV+ + AI AG+ L A ++ Sbjct: 72 RLAEITEMIHTASLFHDDV--VDQAQLRRGVPTVNSVFGNRVAIQAGDFLFAQASWYLAD 129 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 DN++ +LS +G + Q + D I + KT +L+ + Sbjct: 130 -----LDNLQVVKLLSQVIKDFAEGEIR-QGFNRFDTSITLDDYLLKTYYKTASLIANSA 183 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ A+++ A E + +G+NLG+ FQ+ DD+LD Sbjct: 184 KAAAVLSEAPPETIEAMYTYGKNLGLAFQIVDDILD 219 >gi|295394724|ref|ZP_06804939.1| polyprenyl synthetase [Brevibacterium mcbrellneri ATCC 49030] gi|294972320|gb|EFG48180.1| polyprenyl synthetase [Brevibacterium mcbrellneri ATCC 49030] Length = 354 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 36/216 (16%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 L IR +GGK+IR+ L H + A++E +H +LIHDD+ +DN Sbjct: 39 LTDPIRAFCVGGKRIRALATWWGYQLAGGTHPGIAHMAASVELLHAAALIHDDI--IDNS 96 Query: 99 YIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKD-N 141 +RRG P+ H + ++ AIIAG+ L + ++ ++ + D N Sbjct: 97 DMRRGNPSTHAFFSQMHGSAGFEGDARSFGINAAIIAGDVCLGLSEQLFNASGLNVTDPN 156 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQ--------DEFIDET-QVFMIQKMKTGALMCFA 192 +R+ TH+ + ++ GQ LDI+ + +D +V + K F Sbjct: 157 VRA------THDAFRRDVMMGQYLDIRIQAAPVPDSQIVDRAMEVLTYKSAKYSVEQPF- 209 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E GA +A A L F LG FQL DD L Sbjct: 210 -ELGARLAGAKPQFVHDLSAFTLPLGQAFQLRDDEL 244 >gi|29165656|gb|AAH49211.1| PDSS1 protein [Homo sapiens] Length = 414 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 132 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDASSRR 189 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++S+ + ++ ++ G Sbjct: 190 GKHTVNKIWGEKKAVLAGDLILSAASIALA--------RIGNTTVISILTQV-IEDLVRG 240 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 241 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 300 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 301 AFQLIDDVLD 310 >gi|57167586|ref|ZP_00366726.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter coli RM2228] gi|57020708|gb|EAL57372.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter coli RM2228] Length = 275 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 26/190 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GKK+RS L+ A + + ++ AAIE IH SL+HDD+ +D +RRG +V+ Sbjct: 7 SGKKLRSKLLLAIAG----ENANSYKICAAIELIHLASLLHDDI--IDESKLRRGAKSVN 60 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A++ G+ L + AF +S +I S ++ L G+++D+ Sbjct: 61 AEFGTKNALMLGDILYSKAFYELSQLDACFA-SIISDAVVKLAV---------GELMDV- 109 Query: 169 DEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 EF D+ + + KT L+ + GAI+A+ + + +G+NLG+ FQ+ Sbjct: 110 -EFSKSFNADKDKYLKMIYNKTAVLIEASARCGAILANLDE---KAFGEYGKNLGLAFQM 165 Query: 224 ADDLLDCEED 233 DD+LD + D Sbjct: 166 IDDILDIKGD 175 >gi|321470028|gb|EFX81006.1| hypothetical protein DAPPUDRAFT_303672 [Daphnia pulex] Length = 393 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 22/191 (11%) Query: 50 GKKIRSFLVTEC---ASLFNVNHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYI 100 GK IR ++T C A F+++ T ++ E IH SL+HDD+ +D Sbjct: 110 GKAIRP-VITMCMARAINFHLDQNTPYVLQKQKKIAQIAEMIHTASLVHDDV--IDVADS 166 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RR +P+V+I + + +IIAG+ +L A ++++ + + + SQ++ L +Q L Sbjct: 167 RRSRPSVNIVWGQRKSIIAGDFILAMASKMLARLQNKQVIILLSQVLADLVQGEFMQ--L 224 Query: 161 GGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 G + E DE +K KT +L+ ++C++ ++++ A + +G +G Sbjct: 225 GAR------ENKDERFAHYSEKTFKKTASLIAYSCQAVSVLSGADSTLQAVAFQYGRQIG 278 Query: 219 IIFQLADDLLD 229 + FQL DDLLD Sbjct: 279 MAFQLVDDLLD 289 >gi|114629763|ref|XP_507706.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Pan troglodytes] Length = 415 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 190 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++S+ + ++ ++ G Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAASIALA--------RIGNTTVISILTQV-IEDLVRG 241 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 242 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 301 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 302 AFQLIDDVLD 311 >gi|109088459|ref|XP_001102166.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1 isoform 1 [Macaca mulatta] Length = 415 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 190 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ LG Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 248 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 249 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 302 Query: 221 FQLADDLLD 229 FQL DD+LD Sbjct: 303 FQLIDDVLD 311 >gi|50659086|ref|NP_055132.2| decaprenyl-diphosphate synthase subunit 1 [Homo sapiens] gi|74744657|sp|Q5T2R2|DPS1_HUMAN RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName: Full=All-trans-decaprenyl-diphosphate synthase subunit 1; AltName: Full=Decaprenyl pyrophosphate synthase subunit 1; AltName: Full=Trans-prenyltransferase 1; Short=TPT 1 gi|55959523|emb|CAI17280.1| trans-prenyltransferase (TPT) [Homo sapiens] gi|81157931|dbj|BAE48216.1| subunit 1 of decaprenyl diphosphate synthase [Homo sapiens] gi|119606490|gb|EAW86084.1| prenyl (decaprenyl) diphosphate synthase, subunit 1, isoform CRA_a [Homo sapiens] Length = 415 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDASSRR 190 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ LG Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 248 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 249 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 302 Query: 221 FQLADDLLD 229 FQL DD+LD Sbjct: 303 FQLIDDVLD 311 >gi|254556045|ref|YP_003062462.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum JDM1] gi|254044972|gb|ACT61765.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum JDM1] Length = 330 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 18/201 (8%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 ND +L I GGK +R + + + + A++E +H +LIHDD+ + Sbjct: 40 NDAILEMIHG---GGKLLRPAYCLLFSQFTTTDRQRMVALAASLETLHTATLIHDDI--V 94 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154 D+ +RR T+ ++ + TA+ AG+ L F+I++ + K S+ N Sbjct: 95 DDAALRRHHVTIQERFGKDTAVYAGDYLFVVVFKILAHYSSSFK---------SIQMNSE 145 Query: 155 GLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLR 211 ++ +L G++ + +D T +Q++ KT L +C GA + S + +R R Sbjct: 146 NMEKILVGEVQQKNRHYHLDITMAEYLQQIQGKTAELFALSCFLGAYESGQSSHFAQRAR 205 Query: 212 CFGENLGIIFQLADDLLDCEE 232 G +G+ FQ+ DD+LD +E Sbjct: 206 KAGLAIGMAFQILDDILDYQE 226 >gi|15828220|ref|NP_302483.1| polyprenyl diphosphate synthase component [Mycobacterium leprae TN] gi|221230697|ref|YP_002504113.1| polyprenyl diphosphate synthase component [Mycobacterium leprae Br4923] gi|13093913|emb|CAC31793.1| polyprenyl diphosphate synthase component [Mycobacterium leprae] gi|219933804|emb|CAR72375.1| polyprenyl diphosphate synthase component [Mycobacterium leprae Br4923] Length = 330 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 27/231 (11%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61 + + +Q+ RI+ ++D L T + T+ L +A GGK+ R Sbjct: 10 DAAFAATVQDRVVRIEQLMDAELRDT-DEVMTESVLHLFAA------GGKRFRPLFTVLS 62 Query: 62 ASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + + + GA IE +H SL HDD+ MD +RRG P+ ++++ AI+AG Sbjct: 63 AQIGPRPDAPEVIIAGAVIELVHLASLYHDDV--MDEAEVRRGAPSANLRWSNSVAILAG 120 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQMLDIQ--DEFIDETQ 176 + L A ++S QL L I ++ GQM + + E D + Sbjct: 121 DYLFATASRLVS------------QLGLDAVRIIADTFAQLVTGQMRETRGVPEGADSIE 168 Query: 177 VFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++ + KTG L+ A G + A A + ERL G +G FQ++DD Sbjct: 169 QYLKVVYEKTGCLIGSAGRLGGLFAGAHAEQVERLSRLGSIVGTAFQISDD 219 >gi|195452852|ref|XP_002073528.1| GK13098 [Drosophila willistoni] gi|194169613|gb|EDW84514.1| GK13098 [Drosophila willistoni] Length = 449 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+HDD+ +D RRGKP+V+ ++ +AG+ +L+ A +I+ ++ Sbjct: 204 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 261 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + S+++ L +Q LG + E +E + K KT +L+ A ++ A Sbjct: 262 TIVLSKILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 313 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A A N E +G N+G+ FQL DD+LD Sbjct: 314 VIAQADDNVAELAFQYGRNIGLAFQLVDDMLD 345 >gi|119719035|ref|YP_919530.1| polyprenyl synthetase [Thermofilum pendens Hrk 5] gi|119524155|gb|ABL77527.1| Polyprenyl synthetase [Thermofilum pendens Hrk 5] Length = 302 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 17/190 (8%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 YAL GGK +R L AS+F L + A+E +H SL+HDD+ D RRG+ Sbjct: 39 YALFGGKMLRGTLSLLVASMFTAQVEKVLPIALAVELMHAASLVHDDIA--DASPTRRGR 96 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQ 163 P+ +Y AI + L+ A +++ + +K+++ + +L GQ Sbjct: 97 PSFWSKYGLEDAITVPHVLMPVAISLVADAGVEAVKESMNAWRRSAL-----------GQ 145 Query: 164 MLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + D + E V + + KT A+ +C + ++A ++ E R +G G+++ Sbjct: 146 LWDTRILRGREVPVGYEKLIEYKTAAVFEASC-TLPLIAIGRRDIVESGRVYGRFFGLLY 204 Query: 222 QLADDLLDCE 231 Q+ DD D E Sbjct: 205 QVLDDFSDAE 214 >gi|151946397|gb|EDN64619.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae YJM789] gi|190408825|gb|EDV12090.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae RM11-1a] gi|256273178|gb|EEU08127.1| Coq1p [Saccharomyces cerevisiae JAY291] gi|259144849|emb|CAY77788.1| Coq1p [Saccharomyces cerevisiae EC1118] gi|323334502|gb|EGA75876.1| Coq1p [Saccharomyces cerevisiae AWRI796] gi|323338819|gb|EGA80034.1| Coq1p [Saccharomyces cerevisiae Vin13] gi|323349821|gb|EGA84035.1| Coq1p [Saccharomyces cerevisiae Lalvin QA23] Length = 473 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 42/195 (21%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132 R+ +E IH SL+HDD+ +D+ RRG+P+ + + A++AG+ LL A IS Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNTAFTNKMAVLAGDFLLGRATVSISR 234 Query: 133 --SPKT-----------------QLKDN-----------------IRSQLMLSLTHNIGL 156 +P+ QLK+ + S+ + H+ + Sbjct: 235 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFRV 294 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G L D+ I+ + I K +KT AL+ +C AI++ AS + FG Sbjct: 295 PSRQQGLQLS-HDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFG 353 Query: 215 ENLGIIFQLADDLLD 229 NLGI FQL DD+LD Sbjct: 354 RNLGICFQLVDDMLD 368 >gi|28377861|ref|NP_784753.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum WCFS1] gi|300767848|ref|ZP_07077758.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180038|ref|YP_003924166.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270694|emb|CAD63600.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum WCFS1] gi|300494833|gb|EFK29991.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045529|gb|ADN98072.1| trans-hexaprenyltranstransferase, component II [Lactobacillus plantarum subsp. plantarum ST-III] Length = 330 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 18/201 (8%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 ND +L I GGK +R + + + + A++E +H +LIHDD+ + Sbjct: 40 NDAILEMIHG---GGKLLRPAYCLLFSQFTTTDRQRMVALAASLETLHTATLIHDDI--V 94 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154 D+ +RR T+ ++ + TA+ AG+ L F+I++ + K S+ N Sbjct: 95 DDAALRRHHVTIQERFGKDTAVYAGDYLFVVVFKILAHYSSSFK---------SIQMNSE 145 Query: 155 GLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLR 211 ++ +L G++ + +D T +Q++ KT L +C GA + S + +R R Sbjct: 146 NMEKILVGEVQQKDRHYHLDITMAEYLQQIQGKTAELFALSCFLGAYESGQSSHFAQRAR 205 Query: 212 CFGENLGIIFQLADDLLDCEE 232 G +G+ FQ+ DD+LD +E Sbjct: 206 KAGLAIGMAFQILDDILDYQE 226 >gi|322490435|emb|CBZ25694.1| putative polyprenyl synthase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 742 Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 23/196 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK RS + C + + + R A E +H SLI DD+ DN +RRG VH Sbjct: 446 GGKSWRSLIFVSCCNALSRQYFDCSRYIAVAELLHVGSLIIDDI--QDNSVVRRGGKCVH 503 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 ++Y TAI AG+ F + + Q ++ + L ++ L G GQ LDI Sbjct: 504 VEYGVATAINAGSACY---FMGPRAARIQDLPPEKASRIYKLYFDVLLAGH-AGQGLDIY 559 Query: 168 --------------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +D I KTGA + C ++ E + F Sbjct: 560 RLDYLMPKVVETGDTSTLVDALDA--IHTYKTGAAVGALCSMACVLCETPTVLSEAMERF 617 Query: 214 GENLGIIFQLADDLLD 229 G LG+ FQ+ DD L+ Sbjct: 618 GLTLGLAFQIVDDALN 633 >gi|152964618|ref|YP_001360402.1| polyprenyl synthetase [Kineococcus radiotolerans SRS30216] gi|151359135|gb|ABS02138.1| Polyprenyl synthetase [Kineococcus radiotolerans SRS30216] Length = 344 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 18/192 (9%) Query: 49 GGKKIRSFLVTECASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L A L L +E H SL HDD+ MD+ RRG Sbjct: 58 GGKRVRPMLTLLGAHLAGSAPEVPSAVLDAAVVVELTHLASLYHDDV--MDSAPTRRGAA 115 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGG 162 + Y AI+ G+ L A +++ P+ +L+ +L L H G G Sbjct: 116 AAQLVYGNNVAILTGDLLFARASNVVAGLGPEAVRLQAETFERLCLGQLHET--VGPKPG 173 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + D + ++D + KT +L+ A GA+ A S + +GE++G+ FQ Sbjct: 174 E--DPVEHYLD------VLSDKTASLIATAGRFGAMFAGGSGETVTAMVRYGEDVGVAFQ 225 Query: 223 LADDLLDCEEDL 234 LADD+LD D+ Sbjct: 226 LADDVLDLTSDV 237 >gi|325970901|ref|YP_004247092.1| trans-hexaprenyltranstransferase [Spirochaeta sp. Buddy] gi|324026139|gb|ADY12898.1| Trans-hexaprenyltranstransferase [Spirochaeta sp. Buddy] Length = 328 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+RVG+ +E IH SL+HDD+ +D+ RRGK TV + A++AG+ LL A + Sbjct: 68 AIRVGSILELIHLASLVHDDI--IDSAAKRRGKSTVFAKVGAKQAVLAGDFLLAKALMLT 125 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 S + + + S+ + L + Q G D FI KT +L Sbjct: 126 SGKERGMDSRVVSRALSRLCESELEQDAGQG------DFFISHHTYLRRIAGKTASLFAL 179 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +C +G + + + G +G+ FQ+ DD+LD Sbjct: 180 SCYAGVALQESEPTRQMLCHRIGYCMGMAFQIQDDILD 217 >gi|307719658|ref|YP_003875190.1| heptaprenyl diphosphate synthase component II [Spirochaeta thermophila DSM 6192] gi|306533383|gb|ADN02917.1| heptaprenyl diphosphate synthase component II [Spirochaeta thermophila DSM 6192] Length = 327 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 19/165 (11%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +R+ AA+E +H +L+HDD+ +D+ RRG +H Y A++ G+ L A E+++ Sbjct: 69 VRLAAALEMLHMATLVHDDI--VDDAATRRGGAALHRAYGVKEAVLMGDLLFAKALELVA 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-------DEFIDETQVFMIQKMKT 185 + +D+ ++ + G++ +L G++ +++ D F + KT Sbjct: 127 EYAS--RDH-------AVFLSRGVRHILDGEIEEVEVRRALGRDAF-SLRRYLRRILRKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 G L A GA A A + RLR G N+G+ FQ+ DD+LD Sbjct: 177 GLLFVVAFHLGASEAGAEEEVVRRLRRIGYNVGMAFQVIDDVLDV 221 >gi|301784328|ref|XP_002927569.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Ailuropoda melanoleuca] Length = 467 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 22/199 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 185 GKAFRPIIVVLMARACNIHHNNSRDVQASQRSIALIAEMIHTASLVHDDV--IDDASSRR 242 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ LG Sbjct: 243 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTAVISILTQVIEDLVRGEFLQ--LGS 300 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 301 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 354 Query: 221 FQLADDLLD---CEEDLPK 236 FQL DD+LD C +++ K Sbjct: 355 FQLIDDVLDFTSCSDEMGK 373 >gi|33861175|ref|NP_892736.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639907|emb|CAE19077.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 323 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 19/188 (10%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L+++ S R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLISKAISQDFTLTTKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +++ A++AG+ L A +++ DN++ +LS + + G++ Sbjct: 102 TVHSRFNTRVAVLAGDFLFAQASWHLANL-----DNVKVVKLLSRV----IMDLAEGEIK 152 Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + F D Q F I K KT +L+ + ++ ++ + ++ L FG+N+G+ F Sbjct: 153 QNLNRF-DSAQTFSKYINKSYCKTASLIANSTKAAGVLCNLEDDKLNHLYEFGKNIGLAF 211 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 212 QVVDDILD 219 >gi|262190890|ref|ZP_06049107.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae CT 5369-93] gi|262033217|gb|EEY51738.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae CT 5369-93] Length = 274 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 11/167 (6%) Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 +H TA A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T Sbjct: 15 AHHTTA---AAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTR 69 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 +F+++ T+L +++ ++S N+ +G + Q+++ D E + KT Sbjct: 70 SFQMM----TELG-SMKILKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTA 123 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + GAI+ AS + ++ +G+ LG FQL DD++D D Sbjct: 124 RLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 170 >gi|326776680|ref|ZP_08235945.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1] gi|326657013|gb|EGE41859.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1] Length = 347 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 80/184 (43%), Gaps = 13/184 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV AS + A+R A+E H ++L+HDD+ +D RR +PT Sbjct: 62 GKAIRPALVLAAASALGGDPERAVRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 119 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 + AII G+ +L A +++ ++L + + GQ D Sbjct: 120 VFGIPDAIITGDAMLALAQRLLAEDPHPAAARAVARLSSCIIE------LCAGQQADCAF 173 Query: 169 ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E I + + KTGAL+ AC GA+ A A + FG G+ FQL Sbjct: 174 EERGPEEITLDECLTMATAKTGALLGCACSLGALYAGAEDRAVRAMDGFGREAGLSFQLI 233 Query: 225 DDLL 228 DDL+ Sbjct: 234 DDLI 237 >gi|291570889|dbj|BAI93161.1| solanesyl diphosphate synthase [Arthrospira platensis NIES-39] Length = 323 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 8/156 (5%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D +RRG PTVH ++ A++AG+ L + +++ Sbjct: 72 RLAEITEMIHTASLVHDDV--VDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWYLAN 129 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + SQ+++ L QG L+ D + KT +L+ + Sbjct: 130 LDNLEVVKLLSQVIMDLAEGEIQQG------LNRFDTSLSIEAYLEKSYYKTASLIANSS 183 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ +++ S E L +G N+G+ FQ+ DD+LD Sbjct: 184 KAAGLLSGVSAELAEDLYKYGRNIGLAFQIVDDILD 219 >gi|194477144|ref|YP_002049323.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Paulinella chromatophora] gi|171192151|gb|ACB43113.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Paulinella chromatophora] Length = 323 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 19/226 (8%) Query: 9 LQENSKRIDTILDDLL-LQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECA-SLF 65 LQ ++T+L DL L A H Q + L SA GGK+IR +V + +L Sbjct: 8 LQPVESDLETLLSDLRNLIGADHPILQAAAEHLFSA------GGKRIRPGIVLLLSRALS 61 Query: 66 NVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L+ R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L Sbjct: 62 PTGDLSPRHRRLAEITEMIHTASLVHDDV--VDEAATRRGVATVHSRFNHRVAVLAGDFL 119 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 A +++ + S++++ L QG+ + +I+++ Sbjct: 120 FAQASWHLANLDNLEVVKLLSRVIMDLADGEVKQGLFRYNTRQSFETYIEKSYC------ 173 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + + ++A ++ +L FG LG+ FQ+ DD+LD Sbjct: 174 KTASLIANSARAAGVLADLNEEHLVQLYRFGRQLGLAFQVVDDILD 219 >gi|291279049|ref|YP_003495884.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1] gi|290753751|dbj|BAI80128.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1] Length = 327 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + L ++ + +E IH +L+HDD+ +D RRGK + Sbjct: 46 GGKRLRPVFLILSSKLSGYEGNRSIVISGVVEYIHTATLLHDDV--IDGAMYRRGKKAAN 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ G+ L + AF + +KD + Q++L+ +G + Q++ Sbjct: 104 RVFGNDITVLCGDFLYSRAFVNL------VKDGDPEVQMILANAAKTMSEGEVF-QLVKT 156 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + + I KT L CE GA+++ + ++++E LR +G +G+ FQ++DD+ Sbjct: 157 ANFDLTMEDYLKIIFSKTAILFSSCCEIGAVLSKSDKDKRENLREYGRLIGLAFQMSDDI 216 Query: 228 LD 229 LD Sbjct: 217 LD 218 >gi|254777239|ref|ZP_05218755.1| GAF domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 1804 Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 24/202 (11%) Query: 45 YALLGGKKIRSFL-VTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 Y L GGK +R L + C L HL A L A +E H LIHDD+ D + RR Sbjct: 1464 YPLRGGKALRPALSIATCLGLGG--HLEAILPTAATLELYHNAFLIHDDIE--DESWWRR 1519 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGM-- 159 GKPT+HI + A+ G+ +L+ + + L DN+ R L +L + M Sbjct: 1520 GKPTLHIDHGVPVAVNVGDAMLSLSLQ-------PLLDNVERVGLGPALRILRAVATMTR 1572 Query: 160 --LGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFA-CESGAIMAHASQNEKERLR 211 + GQ L++ +D+ + ++KT ++GA+ A A+ + L Sbjct: 1573 KTVDGQALELDWVHSNTWRLDDADYLEMVELKTSWYSFITPLQAGAVAAGATPDRMAPLE 1632 Query: 212 CFGENLGIIFQLADDLLDCEED 233 G +LG FQ+ DDLL+ D Sbjct: 1633 SLGRHLGAAFQITDDLLNLRAD 1654 >gi|149197624|ref|ZP_01874674.1| geranylgeranyl pyrophosphate synthetase [Lentisphaera araneosa HTCC2155] gi|149139194|gb|EDM27597.1| geranylgeranyl pyrophosphate synthetase [Lentisphaera araneosa HTCC2155] Length = 360 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 55/224 (24%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GGK++R L A+L + A V +A E H ++L+HDD+ +D RRG Sbjct: 42 YTKNGGKRLRPALCLWSAALVSDCPELATSVASAAEIFHTWTLVHDDI--IDRDATRRGL 99 Query: 105 PTVHIQYDEVT------------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 PT H + AI+ G+ +A ++S Q ++ S Sbjct: 100 PTSHTALADFARKEHGSEGDNADHFGLSMAILTGDLQQAWALRLVSE---QANKDLTSGT 156 Query: 147 MLS-----LTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMKTGALMCFACESG 196 L+ L+H + +LGG+ +D++ E I ++ + +MKT L+ F+ ++G Sbjct: 157 ALAVMDRLLSHVYPV--LLGGEAIDVEFEHREIDSISPEEILKMLEMKTACLLEFSAQAG 214 Query: 197 AIMA------------HASQNEKERLRCFGENLGIIFQLADDLL 228 ++ HA Q F N G+ FQL DD+L Sbjct: 215 VVVGLELDSFDHDLVHHAGQ--------FAYNAGLAFQLQDDIL 250 >gi|124008499|ref|ZP_01693192.1| polyprenyl synthetase [Microscilla marina ATCC 23134] gi|123986007|gb|EAY25857.1| polyprenyl synthetase [Microscilla marina ATCC 23134] Length = 324 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 12/182 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R V A + A R A IE +H +L+HDD+ +D+ RRG +++ Sbjct: 46 GKQMRPMFVFLSAGTGGEINEMAYRGAALIELLHTATLVHDDV--VDDSNYRRGFFSINA 103 Query: 110 QYDEVTAIIAGNGLLTYAF--EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + A++ G+ LL+ I + QLK I S + ++ LQ + + LDI Sbjct: 104 LWKNKIAVLVGDYLLSRGLLLSIDNEDFEQLK--IVSNAVREMSEGELLQ-IAKARRLDI 160 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +E + I + KT +L+ C GA A ++ + R FGE +G+ FQ+ DDL Sbjct: 161 TEEV-----YYDIIRQKTASLIASCCAVGASAAGLNKEQISMFREFGEKVGMAFQIKDDL 215 Query: 228 LD 229 D Sbjct: 216 FD 217 >gi|256082061|ref|XP_002577281.1| prenyl transferase; trans-prenyltransferase [Schistosoma mansoni] gi|238662587|emb|CAZ33518.1| prenyl transferase [Schistosoma mansoni] Length = 409 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 17/160 (10%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SLIHDDL +D+ +RRGK + + + A++ G+ +LT++ +++ Sbjct: 161 EMIHTASLIHDDL--IDSAAVRRGKTSAYKAFGHREAVLGGDFILTHSSRLLAQIGDTGV 218 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI----QKMKTGALMCFACES 195 + SQ++ L H G+M+ + D+ + F KT +L+ +C++ Sbjct: 219 IAVLSQVIEDLIH---------GEMMQLAPNSDDDDKRFQTYLTKTYRKTASLIANSCKA 269 Query: 196 GAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A++ SQ + + FGE+LG+ FQL DD+LD D Sbjct: 270 VAMLTVPTLSQWHIDNMYEFGEHLGMAFQLIDDVLDFVTD 309 >gi|6319475|ref|NP_009557.1| Coq1p [Saccharomyces cerevisiae S288c] gi|116929|sp|P18900|COQ1_YEAST RecName: Full=Hexaprenyl pyrophosphate synthase, mitochondrial; Short=HPS; Flags: Precursor gi|171704|gb|AAA34686.1| hexaprenyl pyrophosphate synthetase (COQ1) [Saccharomyces cerevisiae] gi|536190|emb|CAA84939.1| COQ1 [Saccharomyces cerevisiae] gi|45270088|gb|AAS56425.1| YBR003W [Saccharomyces cerevisiae] gi|285810339|tpg|DAA07124.1| TPA: Coq1p [Saccharomyces cerevisiae S288c] gi|323310186|gb|EGA63378.1| Coq1p [Saccharomyces cerevisiae FostersO] Length = 473 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 42/195 (21%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132 R+ +E IH SL+HDD+ +D+ RRG+P+ + + A++AG+ LL A IS Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRATVSISR 234 Query: 133 --SPKT-----------------QLKDN-----------------IRSQLMLSLTHNIGL 156 +P+ QLK+ + S+ + H+ + Sbjct: 235 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFRV 294 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G L D+ I+ + I K +KT AL+ +C AI++ AS + FG Sbjct: 295 PSRQQGLQLS-HDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFG 353 Query: 215 ENLGIIFQLADDLLD 229 NLGI FQL DD+LD Sbjct: 354 RNLGICFQLVDDMLD 368 >gi|14625006|dbj|BAB61883.1| farnesyl diphosphate synthase [Rhodovulum strictum] Length = 110 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 4/93 (4%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG PTVH+++DE TA++ G+ L T AFE+++ P +R L+ +L G+ GM Sbjct: 12 LRRGLPTVHLKWDEGTALLVGDALQTLAFEMLADPACHPDPAVRIDLVAALARASGIDGM 71 Query: 160 LGGQMLDIQDE----FIDETQVFMIQKMKTGAL 188 + GQ DI E + ++ + KTGAL Sbjct: 72 VLGQAQDISVETDGRALSLAEITELHANKTGAL 104 >gi|158604961|gb|ABW74777.1| bifunctional short chain isoprenyl diphosphate synthase [Campylobacter concisus 13826] Length = 297 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 92/168 (54%), Gaps = 24/168 (14%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA-FEI 130 +L++ A IE IH SL+HDD+ +D IRRGKP+++ + +++ G+ L + A FE+ Sbjct: 48 SLKLCAIIELIHLASLLHDDV--IDEANIRRGKPSINALFGSKNSVMLGDILYSKAYFEL 105 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM---KT 185 T+ +I + + +++ + G+M+D++ + F + Q ++ KM KT Sbjct: 106 -----TKFDPSIAAVISDAVSK------LSIGEMMDVKMAENFNENEQEYL--KMIYYKT 152 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ GA +A + E+ +G+NLG+ FQ+ DD+LD +D Sbjct: 153 AVLIEATAICGAKLAG---KDSEKFGLYGKNLGLAFQIVDDILDITQD 197 >gi|223040963|ref|ZP_03611224.1| prenyl transferase [Campylobacter rectus RM3267] gi|222877760|gb|EEF12880.1| prenyl transferase [Campylobacter rectus RM3267] Length = 297 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 28/170 (16%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 +L++ A IE IH SL+HDD+ +D+ RRG P+++ + A++ G+ L + F + Sbjct: 48 SLKICAIIELIHLASLLHDDV--IDDAGTRRGSPSINASFGAKNAVMLGDILYSKGFYEL 105 Query: 132 SSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDIQ-----DEFID--ETQVFMIQKM 183 S ++ I + LS+ G+M+D++ +E I ET ++ Sbjct: 106 SKFPHEIAGEISGAVSKLSV-----------GEMMDVELSAKFNENIAAYETMIYY---- 150 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT L+ A GA++ E + +G+NLG+ FQ+ DD+LD +D Sbjct: 151 KTAVLIEAAAAVGAMLVGL---ETRNFKIYGKNLGLAFQIIDDILDVTQD 197 >gi|305433092|ref|ZP_07402248.1| octaprenyl-diphosphate synthase [Campylobacter coli JV20] gi|304443793|gb|EFM36450.1| octaprenyl-diphosphate synthase [Campylobacter coli JV20] Length = 297 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 22/188 (11%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GKK+RS L+ A + + ++ AAIE IH SL+HDD+ +D +RRG +V+ Sbjct: 29 SGKKLRSKLLLAIAG----ENANSYKICAAIELIHLASLLHDDI--IDESKLRRGAKSVN 82 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ A++ G+ L + AF +S +I S ++ L G+++D++ Sbjct: 83 AEFGTKNALMLGDILYSKAFYELSQLDACFA-SIISDAVVKLAV---------GELMDVE 132 Query: 169 --DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 F D+ + + KT L+ + GAI+A+ + + +G+NLG+ FQ+ D Sbjct: 133 LSKSFNADKDKYLKMIYNKTAVLIEASARCGAILANLDE---KAFGEYGKNLGLAFQMID 189 Query: 226 DLLDCEED 233 D+LD + D Sbjct: 190 DILDIKGD 197 >gi|182436056|ref|YP_001823775.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464572|dbj|BAG19092.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 347 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 13/184 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV AS + A+R A+E H ++L+HDD+ +D RR +PT Sbjct: 62 GKAIRPALVLAAASALGGDPERAVRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 119 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + AII G+ +L A +++ ++L + + GQ D Sbjct: 120 VFGIPDAIITGDAMLALAQRLLAEDPHPAAARAVARLSSCIIE------LCAGQQADCAF 173 Query: 170 EFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E +V + + KTGAL+ AC GA+ A A + FG G+ FQL Sbjct: 174 EERGPEEVTLDECLTMATAKTGALLGCACSLGALYAGAEDRAVRAMDGFGREAGLSFQLI 233 Query: 225 DDLL 228 DDL+ Sbjct: 234 DDLI 237 >gi|73948851|ref|XP_849908.1| PREDICTED: similar to trans-prenyltransferase [Canis familiaris] Length = 365 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 83 GKAFRPIIVVLMARACNIHHSNSRDVQASQRSIALIAEMIHTASLVHDDV--IDDASSRR 140 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ LG Sbjct: 141 GKHTVNKIWGEKKAVLAGDLILSAASMALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 198 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 199 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 252 Query: 221 FQLADDLLD 229 FQL DD+LD Sbjct: 253 FQLIDDVLD 261 >gi|298710752|emb|CBJ32173.1| geranylgeranyl pyrophosphate synthase, chloroplast precursor [Ectocarpus siliculosus] Length = 254 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 1/90 (1%) Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 ++I Y+L+ GGK++R L +F + A+ + E IH SLIHDDLP+MD+ Sbjct: 143 ASIHYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDD 202 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +RRG PT H++Y E AI+AG+ LL+ +FE Sbjct: 203 LRRGMPTCHVKYGEDIAILAGDALLSKSFE 232 >gi|172039945|ref|YP_001799659.1| putative polyprenyl diphosphate synthase [Corynebacterium urealyticum DSM 7109] gi|171851249|emb|CAQ04225.1| putative polyprenyl diphosphate synthase [Corynebacterium urealyticum DSM 7109] Length = 336 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 20/194 (10%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA---IECIHCYSLIHDDLPSMDNGYIRR 102 AL GGK+ R A+ + N TA +V A +E H +L HDD+ MD RR Sbjct: 53 ALAGGKRFRVVFAL-LAAQYGKNP-TARKVRDAAVVVELTHLATLYHDDV--MDEADRRR 108 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G + + ++ AI+AG+ L A EI+S + + + G ++ G Sbjct: 109 GAESANARWGNSMAILAGDYLFAVASEILS--------GLGAHTVRHFADTFG--ELVTG 158 Query: 163 QMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 QM + E + K+ KTG L+ A GA+ + A Q + L FG ++G Sbjct: 159 QMRETVGAADGEDAIEHYMKVIQEKTGVLIASAGYLGALHSGAEQEHVDALAQFGRHMGQ 218 Query: 220 IFQLADDLLDCEED 233 IFQ+ DD++D D Sbjct: 219 IFQIVDDIIDIWAD 232 >gi|254394001|ref|ZP_05009090.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294810895|ref|ZP_06769538.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|326439472|ref|ZP_08214206.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|197707577|gb|EDY53389.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294323494|gb|EFG05137.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 368 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 36/210 (17%) Query: 45 YALLGGKKIRSFLVTECASLFNV-----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + L GGK++R L CA + + +RVGAA+E H ++L+HDDL MD Sbjct: 58 FVLRGGKRLRPLL---CACGWYAAGGTGDPTAVVRVGAALELFHAFALVHDDL--MDRSA 112 Query: 100 IRRGKPTVH--------IQYDEVT--------AIIAGNGLLTYAFEII-SSPKTQLKDNI 142 RRG+P VH D T AI+ G+ ++ E++ ++P T + + Sbjct: 113 TRRGRPAVHRALADRYRSTRDHATAERLGVGSAILLGDLACVWSCELLHTAPLTPRQFSA 172 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMC-FACESGAI 198 +L + H + + M GQ LD+ + D + + KT C +GA Sbjct: 173 ----LLPVVHAMRTEVMY-GQYLDLLATGEPTADVRGPLRVARYKTATYTCERPLHAGAA 227 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLL 228 +A + + + LG FQL DDLL Sbjct: 228 LAGGPEAVLDACTAYALPLGEAFQLRDDLL 257 >gi|323356280|gb|EGA88084.1| Coq1p [Saccharomyces cerevisiae VL3] Length = 371 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 42/195 (21%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132 R+ +E IH SL+HDD+ +D+ RRG+P+ + + A++AG+ LL A IS Sbjct: 75 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNTAFTNKMAVLAGDFLLGRATVSISR 132 Query: 133 --SPKT-----------------QLKDN-----------------IRSQLMLSLTHNIGL 156 +P+ QLK+ + S+ + H+ + Sbjct: 133 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFRV 192 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G L D+ I+ + I K +KT AL+ +C AI++ AS + FG Sbjct: 193 PSRQQGLQLS-HDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFG 251 Query: 215 ENLGIIFQLADDLLD 229 NLGI FQL DD+LD Sbjct: 252 RNLGICFQLVDDMLD 266 >gi|126341457|ref|XP_001376077.1| PREDICTED: similar to PDSS1 protein [Monodelphis domestica] Length = 412 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 24/200 (12%) Query: 50 GKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A NV+H + + E IH SL+HDD+ +D+ RR Sbjct: 130 GKAFRPIVVVLMARACNVHHNNCRDMQASQRSIALIAEMIHTASLVHDDI--IDDASSRR 187 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++S+ + ++ ++ G Sbjct: 188 GKHTVNQIWGEKKAVLAGDFILSAASVALA--------RIGNTTIVSVLTQV-IEDLVRG 238 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E I+K KT +L+ +C++ +I+ E +G+N+GI Sbjct: 239 EFLQLGSKENENERFAHYIEKTFKKTASLLANSCKAVSILGCPDPVVHEIAYQYGKNIGI 298 Query: 220 IFQLADDLLD---CEEDLPK 236 FQL DD+LD C + L K Sbjct: 299 AFQLIDDVLDFTSCTDQLGK 318 >gi|281342287|gb|EFB17871.1| hypothetical protein PANDA_017357 [Ailuropoda melanoleuca] Length = 363 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 22/199 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 81 GKAFRPIIVVLMARACNIHHNNSRDVQASQRSIALIAEMIHTASLVHDDV--IDDASSRR 138 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ LG Sbjct: 139 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTAVISILTQVIEDLVRGEFLQ--LGS 196 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 197 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 250 Query: 221 FQLADDLLD---CEEDLPK 236 FQL DD+LD C +++ K Sbjct: 251 FQLIDDVLDFTSCSDEMGK 269 >gi|116753666|ref|YP_842784.1| polyprenyl synthetase [Methanosaeta thermophila PT] gi|116665117|gb|ABK14144.1| Polyprenyl synthetase [Methanosaeta thermophila PT] Length = 289 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 20/189 (10%) Query: 43 IRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 I Y L+ GK++R ++ + F + AL A+E H SLIHDD+ +D G R Sbjct: 31 IEYVLMSPGKRVRPLILLFSSEAFGCDPRYALNAALAVELAHAASLIHDDI--LDCGVER 88 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQG 158 RG P+ ++ +++AG+ L++ + +ISS P +L + Sbjct: 89 RGAPSAFRRFGMEASLLAGDYLISMSIGLISSYGEPAIRL-------------FSKACMD 135 Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 M G+++D+ + + KT +L + G ++A A + ++ +G LG Sbjct: 136 MAEGEIIDLS-RIASPQEYYQCITKKTASLFAASARLGCMIAGADREDQILYERYGLELG 194 Query: 219 IIFQLADDL 227 + +Q+ DDL Sbjct: 195 LAYQIVDDL 203 >gi|159041083|ref|YP_001540335.1| polyprenyl synthetase [Caldivirga maquilingensis IC-167] gi|157919918|gb|ABW01345.1| Polyprenyl synthetase [Caldivirga maquilingensis IC-167] Length = 299 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 SA+ Y GK IR L N + A+ A+E +H +L+ DD+ +D + Sbjct: 38 SAMHYIHNKGKMIRPLLTLITTHTLGGNLMDAVNPAIAVELVHVATLLQDDI--IDGHLM 95 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQG 158 RRG T +Y I+A + L+ A E KT+ + + L L++ + L+ Sbjct: 96 RRGSETPFKRYGTEYTILASDLLIAKAIEYSLKSKTRRITMELTSAALRLAIGQSYELEY 155 Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 L G+ +D I + KT +L+ A G +A A N LR GE LG Sbjct: 156 KLNGK--------VDMNIYMRIIENKTASLISAAIVLGGYVADADSNTINLLRSLGEKLG 207 Query: 219 IIFQLADDLLD---CEEDLPK 236 +Q+ DD++D ++D PK Sbjct: 208 AAYQIRDDIIDYLNLDKDNPK 228 >gi|332240581|ref|XP_003269466.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Nomascus leucogenys] Length = 397 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 19/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 115 GKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 172 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ LG Sbjct: 173 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 230 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 231 K------ENESERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 284 Query: 221 FQLADDLLD 229 FQL DD+LD Sbjct: 285 FQLIDDVLD 293 >gi|302869226|ref|YP_003837863.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] gi|302572085|gb|ADL48287.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] Length = 355 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 33/212 (15%) Query: 41 SAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNG 98 +A+R+ L GGK++R F + V AA +E H ++LIHDD+ +D Sbjct: 42 TAVRWFVLAGGKRMRPLFCYWGWRGFGGPDAAPIVVAAASLELFHAFALIHDDI--VDRS 99 Query: 99 YIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLK 139 RRG PT+H + Y A++ G+ T++ ++ P +L+ Sbjct: 100 DRRRGAPTLHRFFAELHAASGWPGDPVAYGRQAAVLCGDLCATWSAQMFHGCGLPPERLR 159 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGAL-MCFACESG 196 R ++L+ + ++ G+ LD+ D + + ++KT + + G Sbjct: 160 ---RGHVLLARMRSE----VIAGEYLDVVGAAGDGSVANALTVVRLKTARYTVTRPVQIG 212 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A +A A+ E L FG+ LG FQL DDLL Sbjct: 213 AALAGAAPEEVAALAGFGDPLGDAFQLRDDLL 244 >gi|167461667|ref|ZP_02326756.1| heptaprenyl diphosphate synthasecomponent II (spore germination protein C3) [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382208|ref|ZP_08056122.1| heptaprenyl diphosphate synthase component II-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153825|gb|EFX46192.1| heptaprenyl diphosphate synthase component II-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 326 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 14/186 (7%) Query: 49 GGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R +V S F + L++ A E IH SLIHDD+ +D RR +P Sbjct: 45 GGKRLRPMMVI-VGSRFGPRPSPRKTLQLAAIAEFIHAASLIHDDI--IDRSDTRRNRPA 101 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H + TA+ N ++ E++S + ++ ++ T + G+ Sbjct: 102 LHTKVGIQTAVHTANYMMARVVELLSQYSKEHDRYVQDFSAITTTQ------LCIGEYQQ 155 Query: 167 IQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + F D T+ ++K KT LM + GA + AS ++L FGE L + FQ+ Sbjct: 156 LNHRFDFDVTEEVYLEKTGNKTAQLMATCLKVGAKSSDASDAVADKLYQFGECLVMSFQI 215 Query: 224 ADDLLD 229 DDLLD Sbjct: 216 RDDLLD 221 >gi|1220524|gb|AAA91949.1| geranylgeranyl pyrophosphate synthase [Streptomyces griseus] gi|1632833|emb|CAA64849.1| GGPP synthase [Streptomyces griseus] Length = 425 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 31/207 (14%) Query: 45 YALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 + L GGK++R L S ALR+G A+E I +LIHDD+ MD +RRG Sbjct: 78 FTLEGGKRMRPRLLWWGMRSCGAAETAAALRLGVALELIQSCALIHDDV--MDRSRLRRG 135 Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 KP +HI + A++AG+ L +A + ++ +T L R ++ Sbjct: 136 KPAMHIGLAERAGLSPDSERGSDFGASAAVLAGDLALVWADDTVA--ETVLSAAQRRRIG 193 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL--MCFACESGAIMAHASQN 205 +L + + M+ GQ LD++ + + V Q ++T L ++ E + A Sbjct: 194 -ALWRAMRTE-MVAGQYLDLRGQLSGGSSV--AQALRTACLKSASYSVERPLAIGAALAG 249 Query: 206 EKER----LRCFGENLGIIFQLADDLL 228 +R LR G GI FQL DDLL Sbjct: 250 ADDRTTDALRSAGRCAGIAFQLRDDLL 276 >gi|146082077|ref|XP_001464441.1| farnesyl synthetase [Leishmania infantum JPCM5] gi|134068533|emb|CAM66828.1| putative solanesyl-diphosphate synthase [Leishmania infantum JPCM5] gi|322497846|emb|CBZ32922.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 359 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 13/165 (7%) Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 L LR+ E IH SL+HDD+ +D+ RRG+P +H YD A++AG+ +L A Sbjct: 107 LPFLRLAEVTELIHTASLVHDDV--IDSTGTRRGRPALHKVYDAKRAVLAGDYMLARASF 164 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 I++ + ++++ +T L+ + G+++ + D D + KT +L+ Sbjct: 165 YIATLQV-------PRIVILMT--TALEELTAGELIQM-DGCFDIPRYEQKSFCKTASLI 214 Query: 190 CFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + S A++A E+ FG++LGI FQ+ DD LD D Sbjct: 215 ANSLASTAVLADPGNEALEQTAFDFGKHLGIAFQILDDCLDITGD 259 >gi|182440623|ref|YP_001828342.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178469139|dbj|BAG23659.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 425 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 31/207 (14%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 + L GGK++R L+ TA LR+G A+E I +LIHDD+ MD +RRG Sbjct: 79 FTLDGGKRVRPRLLWWGMRSCGAAETTAALRLGVALELIQSCALIHDDV--MDRSRLRRG 136 Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 KP VHI + A++AG+ L +A + ++ +T L ++ + + Sbjct: 137 KPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDLALAWADDTVA--ETALS-AVQRRRI 193 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL--MCFACESGAIMAHASQN 205 L + + M+ GQ LD++ + + V Q ++T L ++ E + A Sbjct: 194 GPLWRAMRTE-MVAGQYLDLRGQVRGGSSVE--QALRTACLKSASYSVERPLALGAALAG 250 Query: 206 EKER----LRCFGENLGIIFQLADDLL 228 E LR G GI FQL DDLL Sbjct: 251 ADEATTDALRSAGRCAGIAFQLRDDLL 277 >gi|218200608|gb|EEC83035.1| hypothetical protein OsI_28120 [Oryza sativa Indica Group] gi|222640053|gb|EEE68185.1| hypothetical protein OsJ_26326 [Oryza sativa Japonica Group] Length = 399 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 13/160 (8%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +R+ E IH SLIHDD+ +D+ RRG +++ + A++AG+ LL+ AF S Sbjct: 140 MRLAEITELIHVTSLIHDDV--LDDANTRRGMDSLNCVMGKKLAVLAGDFLLSKAF---S 194 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQK--MKTGALM 189 + L DN L+L+ N ++ G+ + ++ I + + +QK KT AL+ Sbjct: 195 TAAVSL-DNAEVILLLATAVN----NLVTGEFMQMRITPIQRCSMDYYLQKSYYKTAALI 249 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +C++ A++A + +G++LGI +QL DD+LD Sbjct: 250 SNSCKAVAVLAGQTAEVATLAYQYGKHLGIAYQLIDDILD 289 >gi|134294668|ref|YP_001118403.1| trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4] gi|134137825|gb|ABO53568.1| Trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4] Length = 331 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ A + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 52 GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ +R +LS I +G + Q+L++ Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +DE++ + + KT L + GA+++ A + +G +G FQ+ DD L Sbjct: 164 DADVDESRYMQVIRYKTAKLFEASARLGAVLSGADAPTEAAAAEYGRRIGTAFQIMDDWL 223 Query: 229 D 229 D Sbjct: 224 D 224 >gi|227503267|ref|ZP_03933316.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens ATCC 49725] gi|227075770|gb|EEI13733.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens ATCC 49725] Length = 359 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 43/214 (20%) Query: 45 YALLGGKKIRSFLVTE---CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 + L GGK++R A + + LR +++E I +LIHDD+ +D R Sbjct: 46 FVLDGGKRVRPMYAWAGYLAAGRGSESPEAMLRAASSLEFIQACALIHDDI--IDASNTR 103 Query: 102 RGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIIS----SPKT--QLK 139 RGKPTVH + + + AI+ G+ L YA ++ SP+ + + Sbjct: 104 RGKPTVHREAERLHRESDFLGDPEFFGTSVAILVGDFALVYAEDMFQDSGLSPEALQRAR 163 Query: 140 DNIRSQLMLSLTHNIGLQG-MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES--- 195 D R G++ +LGGQ+LDI E V + + + E Sbjct: 164 DPWR-----------GMRTEVLGGQLLDISLEAAGSESVALSNSVNRYKTAAYTIERPLH 212 Query: 196 -GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A AS R +G ++GI +QL DD L Sbjct: 213 LGAAIAGASDQLISAFRGYGHDIGIAYQLRDDQL 246 >gi|307194127|gb|EFN76575.1| Decaprenyl-diphosphate synthase subunit 1 [Harpegnathos saltator] Length = 337 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 14/186 (7%) Query: 50 GKKIRSFLVTECASLFN------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GK +R L A + N V + R+ E IH SL+HDD+ +D RRG Sbjct: 56 GKALRPMLSILMARVINYHKGSDVLSYSQRRIAMISEMIHVASLLHDDV--IDQSDSRRG 113 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 KP+V+I + + +AG+ +L A +++ + + +Q++ L +Q LG + Sbjct: 114 KPSVNIIWSQKKVAMAGDYILAVAGTMLARIQNDDVTIVINQIITDLVQGEFMQ--LGSK 171 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + ++E F +KT +LM ++ A +A E +G N+G+ FQL Sbjct: 172 --ETENERF--AHYFTKTYLKTASLMANCSKAVATLAEVDDRMVEMAYQYGRNVGLAFQL 227 Query: 224 ADDLLD 229 DD LD Sbjct: 228 VDDFLD 233 >gi|225009967|ref|ZP_03700439.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-3C] gi|225005446|gb|EEG43396.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-3C] Length = 325 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 18/198 (9%) Query: 39 LLSAIRYALLG--GKKIRSFLVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPS 94 LL+ I Y ++ GK++R V A + + + R + IE IH +L+HDD+ Sbjct: 32 LLNRITYYIVNRKGKQMRPMFVFLTAKMLSGGSVQERTYRGASVIELIHTATLVHDDV-- 89 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +D RRG +++ + A++ G+ LL+ + DN L+ ++ + Sbjct: 90 VDGSDKRRGFFSINALWKNKIAVLVGDYLLSKGLLLCI-------DNDDFDLLKIIS--V 140 Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 ++ M G++L I+ I E + I + KT L+ C GA E E++R Sbjct: 141 AVREMSEGELLQIEKARRLDITEEVYYHIIRQKTATLIAACCALGAASVSPGSEEVEKMR 200 Query: 212 CFGENLGIIFQLADDLLD 229 FG +G+ FQ+ DDL D Sbjct: 201 EFGSLIGMAFQIKDDLFD 218 >gi|222100092|ref|YP_002534660.1| Polyprenyl synthetase [Thermotoga neapolitana DSM 4359] gi|221572482|gb|ACM23294.1| Polyprenyl synthetase [Thermotoga neapolitana DSM 4359] Length = 267 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 16/158 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF+ + + Sbjct: 36 AALELVHLASLLHDDV--IDGARFRRGKETINSLYGDRAAVAAGDLVLVSAFQTVEELEN 93 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 D +R + N+ ++ M G++++ + I + + I + K+GAL A + Sbjct: 94 ---DTLRRAFL-----NV-IRKMSEGELIEQLKRYTPITKEEYLRIVEGKSGALFGLALQ 144 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A++ S E L G +G I+Q+ DD++D E Sbjct: 145 LPALLKGESGEE---LYKLGVTIGTIYQMLDDIMDFAE 179 >gi|62955289|ref|NP_001017656.1| decaprenyl-diphosphate synthase subunit 1 [Danio rerio] gi|62202649|gb|AAH93175.1| Prenyl (decaprenyl) diphosphate synthase, subunit 1 [Danio rerio] Length = 411 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 19/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNH------LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A NV+ L A R A I E IH SL+HDD+ +D+ RR Sbjct: 129 GKAFRPMIVILMARACNVHSNKEGVLLPAQRSIAMISEMIHTASLVHDDV--IDDSDKRR 186 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK T++ + E AI+AG+ +L+ A ++ ++ SQ++ L +Q LG Sbjct: 187 GKNTINNVWGERKAILAGDFILSAASMALARIGNTTVVSVLSQVIEDLVRGEFMQ--LGS 244 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +I+ ++ E +G N+GI Sbjct: 245 K------ENENERFKHYLEKTFKKTASLIANSCKAVSILVNSDPEVHEIAYQYGRNVGIA 298 Query: 221 FQLADDLLD 229 FQL DD+LD Sbjct: 299 FQLVDDILD 307 >gi|311745674|ref|ZP_07719459.1| octaprenyl-diphosphate synthase [Algoriphagus sp. PR1] gi|126575112|gb|EAZ79462.1| octaprenyl-diphosphate synthase [Algoriphagus sp. PR1] Length = 324 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 15/191 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R V A + + + R A IE +H +L+HDD+ +D+ RRG +V+ Sbjct: 46 GKQMRPMFVFLTAGVCGEINESTHRGAALIELLHTATLVHDDV--VDDANYRRGFFSVNA 103 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ LL+ ++S K +L + N ++ M G++L I Sbjct: 104 LWKNKIAVLVGDYLLSRGL-LLSVDNGDFK-------LLQIVSN-AVKEMSEGELLQIAK 154 Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 I E + I + KT +L+ C GA + +++ FGE +G+ FQ+ DD Sbjct: 155 ARKLDITEEVYYQIIRQKTASLIASCCAVGASSVEGNIEVVSKMQEFGEKVGMAFQIKDD 214 Query: 227 LLDC-EEDLPK 236 L D EE++ K Sbjct: 215 LFDYGEEEIGK 225 >gi|108799279|ref|YP_639476.1| polyprenyl synthetase [Mycobacterium sp. MCS] gi|119868395|ref|YP_938347.1| polyprenyl synthetase [Mycobacterium sp. KMS] gi|108769698|gb|ABG08420.1| Polyprenyl synthetase [Mycobacterium sp. MCS] gi|119694484|gb|ABL91557.1| Polyprenyl synthetase [Mycobacterium sp. KMS] Length = 386 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 14/197 (7%) Query: 45 YALLGGKKIRSFL-VTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 Y GGK +R L + C L L A L A +E H LIHDD+ D + RR Sbjct: 50 YPRRGGKALRPALSIAVCLGLGG--QLDAILPTAATLELYHNAFLIHDDI--EDESWWRR 105 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GKPT+HI + A+ G+ +L+ + + + ++ +++ ++ H + + G Sbjct: 106 GKPTMHIDHGIPIAVNVGDAMLSLSLQPLLDNVERIGLGPALRILRAVAHMT--RRTVEG 163 Query: 163 QMLDIQ-----DEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGEN 216 Q ++++ +D+ + ++KT ++GAI A + E L G + Sbjct: 164 QAIELEWVRSNAWRLDDADYLTMVELKTSWYSFITPLQAGAIAAGVDPDRLEPLESLGRH 223 Query: 217 LGIIFQLADDLLDCEED 233 LG FQ+ DDLL+ D Sbjct: 224 LGAAFQITDDLLNLRAD 240 >gi|72381895|ref|YP_291250.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. NATL2A] gi|72001745|gb|AAZ57547.1| trans-hexaprenyltranstransferase [Prochlorococcus marinus str. NATL2A] Length = 323 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 19/188 (10%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L++ + L ++ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLISRALTSEKELPLKHRKLAQITEMIHTASLVHDDV--VDEADTRRGVE 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH ++D A++AG+ L A +++ + + S++++ L QG+ Sbjct: 102 TVHSRFDPRIAVLAGDFLFAQASWHLANLENLEVVKLLSRVIMDLAEGEIKQGL------ 155 Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + F D +Q F ++K KT +L+ + ++ ++++ Q L FG LG+ F Sbjct: 156 ---NRF-DSSQSFESYLEKSYCKTASLIANSSKAIGVLSNVDQESLNSLYFFGRQLGLAF 211 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 212 QVVDDILD 219 >gi|255722599|ref|XP_002546234.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240136723|gb|EER36276.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 480 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 37/191 (19%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127 R+ +E IH SL+HDD+ + + RRG+P+ +I + A++AG+ LL A Sbjct: 188 RLAEIVEMIHTASLLHDDVIDLSDS--RRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 245 Query: 128 ------FEIISSPKTQLKDNIRSQLMLSLTHNIG---------------LQGMLGGQMLD 166 E++S+ L + QL ++ N G + ++ D Sbjct: 246 LRNPEVIELLSTTIANLVEGEFMQLKNTVIQNNNDDQIVNDGEVKEIPRPTGKVPTKLHD 305 Query: 167 IQDEFID-ETQV-----FMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 +D ET V + + K +KT +LM +C + A+++ A + E FG NLG Sbjct: 306 YSVRTVDHETNVDAAFEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDVIENCYSFGRNLG 365 Query: 219 IIFQLADDLLD 229 + FQ+ DD+LD Sbjct: 366 LCFQIVDDMLD 376 >gi|67906783|gb|AAY82846.1| predicted geranylgeranyl pyrophosphate synthase CrtE [uncultured bacterium MedeBAC46A06] Length = 344 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 7/180 (3%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R+ + A L V+ AL AAIE +H SLIHDD+ D +RRG+P V Sbjct: 59 GKMLRAKMALSAADLLKVDRPAALHWAAAIEVLHNASLIHDDI--CDGDRLRRGRPAVWS 116 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 Q+ A+ G+ L+ +FE+ + + + + L+ L ++ + + D+Q Sbjct: 117 QFGRDVALTLGDWLVALSFELAAEAAQRAQTPM---LVKILATHMKTTTLGEAREFDLQ- 172 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 D KT L+ E A MA CF LG +Q+ +D+L+ Sbjct: 173 PVTDWQHYLQGAGDKTAPLLTAPIEGVATMALHGGAAPTIGACF-RALGNAYQIGNDILN 231 >gi|47221152|emb|CAG05473.1| unnamed protein product [Tetraodon nigroviridis] Length = 418 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 37/198 (18%) Query: 50 GKKIRSFLVTECASLFNVNH------LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRR 102 GK IR +V A N++ L R A I E IH SL+HDD+ +D RR Sbjct: 136 GKAIRPMIVVLMARALNIHSNRSGDLLPGQRAIAMISEMIHTASLVHDDV--IDGSDQRR 193 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK T++ + E AI+AG+ +L+ A + L+ NI + +L Sbjct: 194 GKTTINEIWGERKAILAGDFILSAA-----------------SMALARIGNITVVKVLSQ 236 Query: 163 QMLD-IQDEFI------DETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLR 211 + D ++ EF+ +E + F ++K KT +L+ +C++ +I+ ++ E Sbjct: 237 VIEDLVRGEFMQLGSKENEKERFKHYLEKTFKKTASLIANSCKAVSILVNSDPEVHEIAF 296 Query: 212 CFGENLGIIFQLADDLLD 229 +G+N+GI FQL DD+LD Sbjct: 297 QYGKNVGIAFQLVDDVLD 314 >gi|87303352|ref|ZP_01086140.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. WH 5701] gi|87282000|gb|EAQ73962.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. WH 5701] Length = 323 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 19/226 (8%) Query: 9 LQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 LQ ++T+L DL L+ + + L SA GGK+IR +V + + Sbjct: 8 LQPVENDLETLLSDLRSLIGAGHPILQAAAEHLFSA------GGKRIRPGIVLLLSRALS 61 Query: 67 VN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + L++ R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L Sbjct: 62 PDGELSSRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNNRLAVLAGDFL 119 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 A +++ + S++++ L QG+ + ++D++ Sbjct: 120 FAQASWHLANLDDLAVVKLLSRVIMDLADGEVRQGLYRYDTGQSFETYLDKSYC------ 173 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + ++ +++ + + E L FG LG+ FQ+ DD+LD Sbjct: 174 KTASLIANSAKASGVLSGLADDRLEDLYRFGRQLGLAFQVVDDILD 219 >gi|307720825|ref|YP_003891965.1| Polyprenyl synthetase [Sulfurimonas autotrophica DSM 16294] gi|306978918|gb|ADN08953.1| Polyprenyl synthetase [Sulfurimonas autotrophica DSM 16294] Length = 295 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 22/190 (11%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK++R+ L+ + A H A + A +E IH SL+HDD+ +D+ RRG+ + Sbjct: 27 LQGGKRLRAKLILKIAP----EHKDAPLLAAIVELIHAASLLHDDV--IDDAMTRRGEAS 80 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 V+ TA++ G+ L + AF + + ++ I S + + G+M+D Sbjct: 81 VNATDGSKTAVMLGDILYSKAFTELVAFDKKVAQTIAS----------SVTALSKGEMMD 130 Query: 167 I---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + Q+ DE + + +KT L+ A ++ A + + ++ +G NLG+ FQ+ Sbjct: 131 VEMAQNFNADEERYLDMLYLKTATLIEAAAKA---SALLAGKDADKHALYGRNLGLSFQI 187 Query: 224 ADDLLDCEED 233 DD+LD D Sbjct: 188 IDDILDITAD 197 >gi|300770135|ref|ZP_07080014.1| possible trans-hexaprenyltranstransferase [Sphingobacterium spiritivorum ATCC 33861] gi|300762611|gb|EFK59428.1| possible trans-hexaprenyltranstransferase [Sphingobacterium spiritivorum ATCC 33861] Length = 323 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 14/177 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R V A L + + R + +E +H SL+HDD+ +DN RRG +V+ Sbjct: 45 GKQMRPMFVFFSAGLCGSINESTFRGASLVELLHTASLVHDDV--VDNANERRGFFSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ LL+ ++S DN L+ ++ ++ M G++L I+ Sbjct: 103 LWKNKVAVLVGDFLLSKGL-LLSV------DNNDFHLLKIVSE--AVEQMSEGELLQIEK 153 Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I+E+ F + + KT +L+ C GA + +++ FGE +GI FQ+ Sbjct: 154 ARKLDIEESVYFEVIRQKTASLIASCCACGAASTDVDEETVKKMHAFGEKVGIAFQI 210 >gi|149920952|ref|ZP_01909413.1| polyprenyl synthetase [Plesiocystis pacifica SIR-1] gi|149818224|gb|EDM77679.1| polyprenyl synthetase [Plesiocystis pacifica SIR-1] Length = 589 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 17/186 (9%) Query: 49 GGKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R L A AL + A +E +H SL+ DD+ +D +RRG+ Sbjct: 311 GGKRARPLLTLSAAEACGGADEAQRALGLAAGVEWLHQGSLLLDDI--VDAAELRRGRQA 368 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H T+ G+ T+ F + + IRS L+ S + G+ L+ Sbjct: 369 LHA----ATSPTFAAGVATFVFARVVRASQGMHPEIRSALVNSAAT------LAEGERLE 418 Query: 167 IQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 +Q + + T + I KT +L A E GA A + + L +G LG+ FQ+ Sbjct: 419 LQRTGEAELPRTDYYAIIAAKTASLFACAVEVGARAVGAPRGQVRALIRYGRELGLAFQI 478 Query: 224 ADDLLD 229 DD+LD Sbjct: 479 IDDVLD 484 >gi|149193697|ref|ZP_01870795.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2] gi|149135650|gb|EDM24128.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2] Length = 287 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 37/193 (19%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR ++T + N N A ++ A +E IH SL+HDD+ +D RRG +++ Sbjct: 23 GKGIRGKIIT----IINPN---AKKLAAIVEGIHLASLLHDDV--IDEADTRRGVKSINA 73 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML---------SLTHNIGLQGML 160 +Y + TA++ G+ + + F + ++ I + + L L+ NI L Sbjct: 74 KYGDFTAVMLGDIIYSTCFYDLVDFDKEVAKIISNAVRLLSEGELEDVKLSKNINLD--- 130 Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 +D+++ MI K KT +L+ +C++ A + S + E+ +G N+GI Sbjct: 131 -------KDKYMQ-----MIYK-KTASLIEASCKASAFL---SNYDVEKFGTYGRNIGIA 174 Query: 221 FQLADDLLDCEED 233 FQ+ DDLLD +D Sbjct: 175 FQIIDDLLDIIQD 187 >gi|282865630|ref|ZP_06274681.1| Polyprenyl synthetase [Streptomyces sp. ACTE] gi|282559674|gb|EFB65225.1| Polyprenyl synthetase [Streptomyces sp. ACTE] Length = 358 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 16/192 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A L ++A+ A+E +H +SL+HDD+ MD +RR +P V Sbjct: 68 GKGVRQALAVLGAELCGAPGVSAVPGAVAVELVHAFSLVHDDI--MDGDELRRQRPAVWK 125 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 Y A++AG+GLL A + ++ Q + +L L+ L ++ GQ D+ Sbjct: 126 SYGTGPAVLAGDGLLAAAVQTLA----QAPGALGGPAVLRLSGA--LTSLVRGQADDLLF 179 Query: 168 ------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 E + + + KTGAL+ A GA++ A L G +LG+ F Sbjct: 180 ADRPWTGPEAVRPDAYRSMAEHKTGALLGCAAALGALLGGAPDTTVTALDRAGRHLGVAF 239 Query: 222 QLADDLLDCEED 233 Q DDLL D Sbjct: 240 QAVDDLLGIWGD 251 >gi|126348010|emb|CAJ89730.1| putative farnesyl diphosphate synthase [Streptomyces ambofaciens ATCC 23877] Length = 347 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 11/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + A+ A+E +H ++L+HDD+ +D +RR +P Sbjct: 62 GGKAVRPALALLSAVAVGADPAAAVPGAVAVELVHDFTLLHDDV--IDGDALRRHQPAAW 119 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ LL A ++ + +L+ +L ++ GQ D+ Sbjct: 120 SLFGTPAAVLTGDALLVAALRALTQASPRRAGAAVQELVAALLE------LVEGQSHDVA 173 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + V + KTGAL+ AC G ++A A LR FG +LG+ FQ AD Sbjct: 174 FEKAHDVSVADYLTMAAGKTGALIGCACALGGVLAGADAVRVGGLREFGRHLGVAFQCAD 233 Query: 226 DLL 228 D+L Sbjct: 234 DIL 236 >gi|322489859|emb|CBZ25120.1| putative farnesyl synthetase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 359 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 13/165 (7%) Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 L LR+ E IH SL+HDD+ +D RRG+P +H YD A++AG+ +L A Sbjct: 107 LPFLRLAEVTELIHTASLVHDDV--IDKTDTRRGRPALHKVYDTKRAVLAGDYILARASF 164 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 I++ + ++++ +T L+ + G+++ + D D + KT +L+ Sbjct: 165 YIATLQV-------PRIVILMT--TALEELTSGELIQM-DGCFDIPRYEQKSFCKTASLI 214 Query: 190 CFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + S A++A E+ FG++LGI FQ+ DD LD D Sbjct: 215 ANSLASTAVLADPGNEALEQTAFDFGKHLGIAFQILDDCLDITGD 259 >gi|228473247|ref|ZP_04058002.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624] gi|228275397|gb|EEK14189.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624] Length = 327 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 21/192 (10%) Query: 50 GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R FLV + S V T R A IE IH +L+HDD+ +D+ RRG + Sbjct: 46 GKQMRPMFVFLVAKLVSEGLVQERT-YRGAAVIELIHTATLVHDDV--VDDSNKRRGFFS 102 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ + A++ G+ LL+ ++S DN L+ ++ + ++ M G++L Sbjct: 103 INALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLRIIS--VAVREMSEGELLQ 153 Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIF 221 ++ I E + I + KT L+ C GA + A +N + E++R FGE +G+ F Sbjct: 154 MEKARRLDITEEVYYEIIRQKTATLIAACCAMGAC-SVAPENSQVIEQMRLFGEYVGMAF 212 Query: 222 QLADDLLDCEED 233 Q+ DDL D E+ Sbjct: 213 QIKDDLFDYTEE 224 >gi|315427283|dbj|BAJ48895.1| octaprenyl-diphosphate synthase [Candidatus Caldiarchaeum subterraneum] Length = 312 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 22/193 (11%) Query: 43 IRYALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 I A+ GGK++R L+T +L ++ AL V A+E H SL+HDD+ D +R Sbjct: 38 IERAVRGGKRLRPILLLTVFKTLGGTDYTKALDVAVALELAHSASLVHDDIVDFDK--VR 95 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RGK ++ Q AII G+ ++ AF I+ ++ +++ + + +G+L Sbjct: 96 RGKVSLWYQIGAGKAIIQGHRIINLAFNIVLDIGEEM-----TRIFVE-AWDRASKGIL- 148 Query: 162 GQMLDIQDEFID-----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 DE ++ E ++ + KT +L A ++GA++A AS + +R +G Sbjct: 149 -------DEVVNKAALTERLYLLMIREKTASLFEAAAQAGAVLAGASPEMVQHMRRYGSE 201 Query: 217 LGIIFQLADDLLD 229 +G ++QLADDL + Sbjct: 202 VGTVYQLADDLTE 214 >gi|288818513|ref|YP_003432861.1| octoprenyl-diphosphate synthase [Hydrogenobacter thermophilus TK-6] gi|288787913|dbj|BAI69660.1| octoprenyl-diphosphate synthase [Hydrogenobacter thermophilus TK-6] gi|308752103|gb|ADO45586.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6] Length = 307 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 18/193 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + L + IE IH SL+HDD+ +D RRG+ + + Sbjct: 37 GGKRMRPVLSLLTCKALGGDERKVLPLAVGIEYIHVASLLHDDV--VDGADRRRGRLSAN 94 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + ++ G+ + A + S I S+ ++ + GQ+L+++ Sbjct: 95 LVFGNDLCVLTGDYMYAKALWLYSRYGDIKSIEIVSRAVMDMAQ---------GQVLELK 145 Query: 169 D--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + ID+ F I KTG L + GA+M A + + ER G +G FQL DD Sbjct: 146 SIGDIIDQETYFSIIDRKTGVLFGASMAVGALM--AGREDYERFYQMGLKVGRAFQLVDD 203 Query: 227 LLD---CEEDLPK 236 LD EE L K Sbjct: 204 ALDYSGSEEKLGK 216 >gi|254495951|ref|ZP_05108859.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii LLAP12] gi|254354829|gb|EET13456.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii LLAP12] Length = 322 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV ++ + + + A +E H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLASNACSYQGNAHIALAAMVEFFHTATLLHDDV--VDESTLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166 + +I+ G+ L T + E++ + +L L N L+ G Q+ + Sbjct: 101 NIWGSKASILVGDYLFTQSIELMVDSG--------NPAILKLFANTALEISCGEVKQLSN 152 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + + F + + KT L A G +++ AS+ ++ L +G +LG FQL DD Sbjct: 153 RHNPALTFEEYFDVIRAKTALLFAAAACIGPMLSDASKEVQDSLYAYGLHLGNAFQLIDD 212 Query: 227 LLD 229 LD Sbjct: 213 ALD 215 >gi|222823775|ref|YP_002575349.1| polyprenyl-diphosphate synthase [Campylobacter lari RM2100] gi|222538997|gb|ACM64098.1| polyprenyl-diphosphate synthase [Campylobacter lari RM2100] Length = 297 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 20/166 (12%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 + ++ A IE IH SL+HDD+ +D +RRG +++ Q+ AI+ G+ L + AF + Sbjct: 48 SYKICAIIELIHAASLLHDDV--IDEAKLRRGVKSINAQFGAKNAIMLGDILYSKAFYEL 105 Query: 132 SSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKTGA 187 S +L I + + MLS+ G+++D+ + F D+ + KT Sbjct: 106 SLIDLKLAKIISNAVVMLSV-----------GELMDVNLSETFNTDKNAYLQMIYNKTAV 154 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ + GA++A+ ++++ +G+NLG+ FQ+ DD+LD + D Sbjct: 155 LIEASARCGALLANLNEDD---FAEYGKNLGLAFQIVDDILDIKGD 197 >gi|224044763|ref|XP_002189942.1| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 1 [Taeniopygia guttata] Length = 677 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 395 GKAFRPMIVVLMARACNIHHNNSKEVQASQRSVAIIAEMIHTASLVHDDV--IDDANSRR 452 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK T++ + E A++AG+ +L+ A ++ I + ++S+ + ++ ++ G Sbjct: 453 GKRTLNQIWGERKAVLAGDFILSAASVALA--------RIGNTTIVSVLTQV-IEDLVRG 503 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +I+ E +G+N+GI Sbjct: 504 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPKVHEIAYQYGKNVGI 563 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 564 AFQLIDDVLD 573 >gi|118404002|ref|NP_001072229.1| prenyl (decaprenyl) diphosphate synthase, subunit 1 [Xenopus (Silurana) tropicalis] gi|110645682|gb|AAI18814.1| trans-prenyltransferase [Xenopus (Silurana) tropicalis] Length = 292 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 22/199 (11%) Query: 50 GKKIRSFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GK R LV A N++ H + + E IH SL+HDD+ +D RR Sbjct: 10 GKAFRPMLVVLMARACNIHYNNCREVHPSQRTIAEISEMIHTASLVHDDV--IDGSDSRR 67 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV + E A++AG+ +L+ A ++ + SQ+ + L LQ LG Sbjct: 68 GKQTVSGIWGERKAVLAGDLMLSVAAVAMARIGNTTVIALISQIAIDLVRGEFLQ--LGS 125 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E I+K KT +L+ +C++ +++A E +G+N+GI Sbjct: 126 K------ENENERFSHYIEKTFKKTASLIANSCKAVSVLACPDPAVHEIAYQYGKNIGIA 179 Query: 221 FQLADDLLD---CEEDLPK 236 FQL DD+LD C + L K Sbjct: 180 FQLIDDVLDFTSCADQLGK 198 >gi|332978343|gb|EGK15068.1| octylprenyl diphosphate synthase [Psychrobacter sp. 1501(2011)] Length = 343 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 22/192 (11%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + C+ L + A+ + A E +H +L+HDD+ +D +RRG PT Sbjct: 61 GGKRMRPLITLLCSRLCRDEQSEDAMHLAAITEMLHTATLVHDDV--IDESGLRRGHPTA 118 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + +D TA++ G+ L+ AF ++ +S +L L + G + G++L + Sbjct: 119 NATWDNPTAVLVGDYLIARAFNLLVG--------FQSLPLLKLFSD-GTCDIAEGEVLQL 169 Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC---FGENLGIIF 221 Q + E I KT L A AI+ Q++ E ++ FG++ G F Sbjct: 170 QHQHNPQATEDDYMRIIDGKTSRLFMMATCGVAIL----QDKPEFMQPFSDFGQHFGNAF 225 Query: 222 QLADDLLDCEED 233 Q+ DD+LD D Sbjct: 226 QIIDDVLDYTGD 237 >gi|227512276|ref|ZP_03942325.1| possible trans-hexaprenyltranstransferase [Lactobacillus buchneri ATCC 11577] gi|227084451|gb|EEI19763.1| possible trans-hexaprenyltranstransferase [Lactobacillus buchneri ATCC 11577] Length = 325 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 18/191 (9%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK +R ++ +E + L A AAIE +H +LIHDD+ +D +RRG Sbjct: 45 GGKLLRPGFFYIYSEFGENIPADKLRA--GAAAIELLHVATLIHDDV--IDQSPLRRGVQ 100 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+H QY + AI AG+ L T F+ + D R H +Q +L G++ Sbjct: 101 TIHTQYGQKNAIYAGDYLFTCYFDQVLKSTHDATDLQR--------HIEAMQTILNGELD 152 Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + + + + F KT L + E AI+ HA ++ G +G +Q Sbjct: 153 QMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAILTHAPRDIVTLGGEIGLAIGQAYQ 212 Query: 223 LADDLLDCEED 233 + DD+LD D Sbjct: 213 IQDDILDYGGD 223 >gi|162452480|ref|YP_001614847.1| geranyltranstransferase [Sorangium cellulosum 'So ce 56'] gi|161163062|emb|CAN94367.1| Geranyltranstransferase [Sorangium cellulosum 'So ce 56'] Length = 370 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 24/230 (10%) Query: 14 KRIDTILDDLLLQTASHMQT--QHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHL 70 R+D LD A+ +Q + + ++S R L GGK+ R+ L+ + Sbjct: 39 PRVDAALDQRWRDKAASVQRYGREVEAMVSEARSLTLRGGKRFRAGLLVAAYQGVAPDAP 98 Query: 71 --TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---------TAIIA 119 A+ G A+E + Y LI DD +D +RRG TVH+ E +AI+A Sbjct: 99 LGPAIDAGVALELLQTYLLIQDDW--IDGDTVRRGDRTVHVALTETLGDPHLGASSAILA 156 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ ++A ++ + + L+ H + ++ GQ LD+ D Q Sbjct: 157 GDLTWSFALSTLAGADAPPATTLAAVLLFCKMH----EDVVIGQHLDVVGRAEDVEQ--- 209 Query: 180 IQKMKTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + +KTG+ + GA +A A L F +G+ FQL DDLL Sbjct: 210 MHALKTGSYTVRGPLALGATLAGAPAETVAALERFAAPVGVAFQLRDDLL 259 >gi|90577181|ref|NP_062374.2| decaprenyl-diphosphate synthase subunit 1 [Mus musculus] gi|85700953|sp|Q33DR2|DPS1_MOUSE RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName: Full=All-trans-decaprenyl-diphosphate synthase subunit 1; AltName: Full=Decaprenyl pyrophosphate synthase subunit 1; AltName: Full=Solanesyl-diphosphate synthase subunit 1; AltName: Full=Trans-prenyltransferase 1; Short=TPT 1 gi|81157937|dbj|BAE48219.1| subunit 1 of solanesyl diphosphate synthase [Mus musculus] gi|220941795|emb|CAX15884.1| prenyl (solanesyl) diphosphate synthase subunit 1 [Mus musculus] Length = 409 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H A + A+ E IH +L+HDD+ +D+ RR Sbjct: 127 GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 184 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++S+ + ++ ++ G Sbjct: 185 GKHTVNKIWGEKKAVLAGDLILSAASVALA--------RIGNTAVVSMLAQV-IEDLVRG 235 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 236 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 295 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 296 AFQLIDDVLD 305 >gi|148676195|gb|EDL08142.1| prenyl (solanesyl) diphosphate synthase, subunit 1 [Mus musculus] Length = 407 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H A + A+ E IH +L+HDD+ +D+ RR Sbjct: 125 GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 182 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++S+ + ++ ++ G Sbjct: 183 GKHTVNKIWGEKKAVLAGDLILSAASVALA--------RIGNTAVVSMLAQV-IEDLVRG 233 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 234 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 293 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 294 AFQLIDDVLD 303 >gi|91070145|gb|ABE11067.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone HF10-11A3] Length = 327 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 19/221 (8%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-LTAL- 73 ++ LDDL+L+ + + H +A GGK++R +V + + LT+ Sbjct: 15 VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFCLTSKH 74 Query: 74 -RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L A ++ Sbjct: 75 KRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLA 132 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGAL 188 + DN+ +LS + + G++ + F D Q F I K KT +L Sbjct: 133 N-----LDNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFSKYINKSYCKTASL 182 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + ++ +++ + L FG+N+G+ FQ+ DD+LD Sbjct: 183 IANSSKAAGVLSGLNDEHLTSLYDFGKNIGLAFQVVDDILD 223 >gi|253568985|ref|ZP_04846395.1| octaprenyl-diphosphate synthase [Bacteroides sp. 1_1_6] gi|251841004|gb|EES69085.1| octaprenyl-diphosphate synthase [Bacteroides sp. 1_1_6] Length = 324 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 10/193 (5%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 D +++ IR GK +R LV A L+ L ++E +H SL+HDD+ +D Sbjct: 34 DSVITHIRKR--NGKMMRPILVLLVARLYGAVTPATLHAAVSLELLHTASLVHDDV--VD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 RRG+ +V+ ++ +++AG+ LL A ++ + +T + IR L+ SL + Sbjct: 90 ESTERRGQLSVNAVFNNKVSVLAGDYLL--ATSLVHAEQTNNYEIIR--LVSSLGQKLAE 145 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 +L Q+ ++ + E F + + KT AL E+ A+ + E R GE Sbjct: 146 GELL--QLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEY 203 Query: 217 LGIIFQLADDLLD 229 +GI FQ+ DD+ D Sbjct: 204 IGICFQIKDDIFD 216 >gi|227522361|ref|ZP_03952410.1| possible trans-hexaprenyltranstransferase [Lactobacillus hilgardii ATCC 8290] gi|227090499|gb|EEI25811.1| possible trans-hexaprenyltranstransferase [Lactobacillus hilgardii ATCC 8290] Length = 325 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 21/220 (9%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVG 76 L+ LL+ + + R+L+ ++ GGK +R ++ +E + L A Sbjct: 19 LEPYLLKAVTLSNQPVHSRILALLKS---GGKLLRPGFFYIYSEFGENIPADKLRA--GA 73 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AAIE +H +LIHDD+ +D +RRG T+H QY + AI AG+ L T F+ + Sbjct: 74 AAIELLHVATLIHDDV--IDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLKSTH 131 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFAC 193 D R H +Q +L G++ + + + + F KT L + Sbjct: 132 DATDLQR--------HIEAMQTILNGELDQMAFNYRQDMSQKDYFHEITGKTAELFKLSF 183 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 E AI+ HA ++ G +G +Q+ DD+LD D Sbjct: 184 EQSAILTHAPRDIVTLGGEIGLAIGQAYQIQDDILDYGGD 223 >gi|126663213|ref|ZP_01734211.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38] gi|126624871|gb|EAZ95561.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38] Length = 326 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 37/200 (18%) Query: 50 GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK++R FL + S +++ T R + IE IH +L+HDD+ +D+ RRG + Sbjct: 45 GKQMRPMFVFLTAKMVSGGSIDERT-YRGASVIELIHTATLVHDDV--VDDSNKRRGFFS 101 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQ 157 ++ + A++ G+ LL+ L+LS+ +N + ++ Sbjct: 102 INALWKNKIAVLVGDFLLSKG------------------LLLSIDNNDFDLLKIISVAVR 143 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKERLRCF 213 M G++L I+ I E + I + KT L+ C GA +A + E++R F Sbjct: 144 EMSEGELLQIEKARRLDITEDIYYEIIRQKTATLIAACCSLGACSVAPDDKAVVEKMRKF 203 Query: 214 GENLGIIFQLADDLLDCEED 233 GE +G+ FQ+ DDL D +D Sbjct: 204 GELIGMAFQIKDDLFDYTDD 223 >gi|323717965|gb|EGB27153.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CDC1551A] Length = 257 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 20/160 (12%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+ L A I+ T Sbjct: 3 AAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL----T 56 Query: 137 QLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 L D IR M L IG +L GQ D+++ + KT AL Sbjct: 57 GLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKTAAL 110 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 C GA++A+A L FG LG+ FQ DDL+ Sbjct: 111 TGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 150 >gi|133777358|gb|AAI07274.2| Pdss1 protein [Mus musculus] Length = 383 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H A + A+ E IH +L+HDD+ +D+ RR Sbjct: 101 GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 158 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++S+ + ++ ++ G Sbjct: 159 GKHTVNKIWGEKKAVLAGDLILSAASVALA--------RIGNTAVVSMLAQV-IEDLVRG 209 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 210 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 269 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 270 AFQLIDDVLD 279 >gi|282862498|ref|ZP_06271560.1| Polyprenyl synthetase [Streptomyces sp. ACTE] gi|282562837|gb|EFB68377.1| Polyprenyl synthetase [Streptomyces sp. ACTE] Length = 383 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 50/260 (19%) Query: 4 GLPSKLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVT 59 G PS + + + +D L L LQ A M + + + + L GGK++R+ V Sbjct: 19 GAPSTVGDATAAVDAFLASYLDDRLQEARQMDAVFAEEVAGRVAAFVLRGGKRLRTAFVW 78 Query: 60 ECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-- 114 C L + T +R+GAA+E + +L+HDD+ MD +RRG P VH + Sbjct: 79 -CGWLAAGRGGDPGTPVRIGAALELLQACALVHDDV--MDGSPVRRGAPAVHADFARAHR 135 Query: 115 --------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-- 158 A++AG+ L +A D++ ++ L+ H L Sbjct: 136 EAGLRGSAASYSATAAVLAGDLALAWA------------DDLLTETALAAPHGDRLHREW 183 Query: 159 ------MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKE 208 M+ GQ LD++ + + + + T + E GA+ A A Sbjct: 184 RAMRSEMVAGQYLDLRAQATGSSDGDEARTIATLKSALYTVERPLALGAVSAAADARATA 243 Query: 209 RLRCFGENLGIIFQLADDLL 228 LR G G+ FQL DDLL Sbjct: 244 ALRSAGRCAGLAFQLRDDLL 263 >gi|133777361|gb|AAI07275.2| Pdss1 protein [Mus musculus] Length = 385 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H A + A+ E IH +L+HDD+ +D+ RR Sbjct: 103 GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 160 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++S+ + ++ ++ G Sbjct: 161 GKHTVNKIWGEKKAVLAGDLILSAASVALA--------RIGNTAVVSMLAQV-IEDLVRG 211 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 212 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 271 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 272 AFQLIDDVLD 281 >gi|294817027|ref|ZP_06775669.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|326445912|ref|ZP_08220646.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|294321842|gb|EFG03977.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 297 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 83/183 (45%), Gaps = 28/183 (15%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------IQYDEV------TAII 118 AA+E H ++LIHDD+ MD+ RRG PTVH + D+ TAI+ Sbjct: 20 TAAALEMFHAFALIHDDI--MDDSATRRGSPTVHRALADRLGAALDPDQAGQLGVSTAIL 77 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDET 175 G+ LT++ E++ +P T R +L L + + + GQ LDI + D + Sbjct: 78 VGDLALTWSDELLYAPLTP----HRLAAVLPLVTAMRAE-TVHGQYLDITSARRPGTDTS 132 Query: 176 QVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 I + KT A M GA +A A L + G FQLADDLL D Sbjct: 133 LALRIARYKTAAYTMERPLHIGAALAGARPELLAGLSAYALPAGEAFQLADDLLGVFGD- 191 Query: 235 PKK 237 P++ Sbjct: 192 PRR 194 >gi|38233043|ref|NP_938810.1| putative polyprenyl diphosphate synthase component [Corynebacterium diphtheriae NCTC 13129] gi|38199302|emb|CAE48933.1| Putative polyprenyl diphosphate synthase component [Corynebacterium diphtheriae] Length = 330 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 13/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R AS + ++ ++ +E H +L HDD+ MD RRG + Sbjct: 51 GGKRFRPMFAL-LASQYGSQPMSENVIKAAVVVEMTHLATLYHDDV--MDEADKRRGVDS 107 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + +++ AI+AG+ LL + +++ + + +T ++ +G + D Sbjct: 108 ANFRWNNSVAILAGDILLAHVARLMADLGVETVAHFSETFAELVTGQ--MRETIGARDGD 165 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + +++ + KTG L+ A G++ A AS E LR +G +G++FQ+ DD Sbjct: 166 PIEHYLN------VINEKTGVLIASAGFLGSMHAGASAEHVEALRAYGRAIGMVFQIVDD 219 Query: 227 LLDCEED 233 ++D D Sbjct: 220 IIDIFSD 226 >gi|254421801|ref|ZP_05035519.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7335] gi|196189290|gb|EDX84254.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7335] Length = 323 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 11/184 (5%) Query: 49 GGKKIRSFLVTECASLFNVNH-LTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR +V A + +T R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRIRPAIVLLLARATQPDQGITGRHRRLAEITEMIHTASLVHDDV--VDESSTRRGVD 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH ++ A++AG+ L + +++ + S++++ L QG+ Sbjct: 102 TVHSRFGNKVAVLAGDFLFAQSSWYLANLDNLEVVKLLSRVIMDLAEGEIRQGLKHFDTT 161 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D +++++ KT L+ + ++ +++ S + E L FG +LG+ +Q+ D Sbjct: 162 LTIDAYLEKSY------YKTATLIANSAKAVGVLSEVSDHMAENLYQFGRSLGLAYQVVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|119717308|ref|YP_924273.1| polyprenyl synthetase [Nocardioides sp. JS614] gi|119537969|gb|ABL82586.1| Polyprenyl synthetase [Nocardioides sp. JS614] Length = 358 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 101/248 (40%), Gaps = 49/248 (19%) Query: 15 RIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFL--VTECASLFNVNHL 70 RI T +D + + A + D RL+ ++ GGK+ R+ A +V Sbjct: 16 RIQTAVDAFVDEQAGQLGPLGGDAARLVREAHTSVSGGKRFRAAFCYWGHRAVAADVPDE 75 Query: 71 TAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDE 113 TAL R A++E +H +L+HDDL MD RRG P H QY Sbjct: 76 TALVRACASLELLHASALVHDDL--MDASDTRRGHPATHRLFESEHRAAGWRGDPEQYGA 133 Query: 114 VTAIIAGNGLLTYAFEIIS---------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 AI+ G+ LL++A E++ +P ++ D R++ ++ GQ Sbjct: 134 AAAILLGDLLLSWADELLRRCGLPIAQVAPALEVFDRCRTE-------------VIAGQF 180 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGII 220 LD+ + V + ++ E GA +A A L FG LG Sbjct: 181 LDVSVQARGRADVETAMTVLRYKSAKYSIERPLHIGAALAGAGPETMAELSAFGLPLGEA 240 Query: 221 FQLADDLL 228 FQL DDLL Sbjct: 241 FQLRDDLL 248 >gi|159026272|emb|CAO88848.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 323 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R LV+ L R+ E IH SL+HDD+ +D +RR P Sbjct: 44 GGKRVRPAIVLLVSRATMLDRDITPRHRRLAEITEMIHTASLVHDDV--VDEAELRRSVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TV+ +D A++AG+ L + +++ DN+ +LS +G + Q + Sbjct: 102 TVNSLFDNRVAVLAGDFLFAQSSWYLAN-----LDNLEVVKLLSEVIRDFAEGEIQ-QGI 155 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D I KT +L+ + ++ +++ S L +G NLG+ FQ+ D Sbjct: 156 NRFDTSISLEAYLEKSYYKTASLIANSAKAAGVLSEQSAEVNHHLYNYGRNLGLAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|254381308|ref|ZP_04996673.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1] gi|194340218|gb|EDX21184.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1] Length = 404 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 35/212 (16%) Query: 49 GGKKIRS-FLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GG +IRS FL + + T ALRV AA+E I +LIHDD+ MD +RRGKP Sbjct: 75 GGSRIRSRFLWWALRACGGTDAHTPGALRVAAALELIQSCALIHDDV--MDQSAVRRGKP 132 Query: 106 TVHIQ------------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 + H Q + + A++AG+ L++A ++++ + L +R++ Sbjct: 133 SFHTQIALQYSRTTAARQPGLSPFPQAAAVLAGDLALSWADDLVA--EADLDPPVRTE-A 189 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC--FACE----SGAIMAH 201 L + + + M+ GQ LD+ + +Q ++T L + E GA +A Sbjct: 190 LRIWRAMRTE-MIAGQYLDLHGQATSSRSA--VQAIRTVCLKAARYTVEQPLALGAALAG 246 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A L G GI FQL DDLL +D Sbjct: 247 ADDANTRALTAAGRCAGIAFQLRDDLLGVFDD 278 >gi|297686215|ref|XP_002820655.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Pongo abelii] Length = 415 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 19/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 190 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I +Q++ L LQ LG Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVICILTQVIEDLVRGEFLQ--LGS 248 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 249 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 302 Query: 221 FQLADDLLD 229 FQL DD+LD Sbjct: 303 FQLIDDVLD 311 >gi|298387038|ref|ZP_06996592.1| polyprenyl synthetase [Bacteroides sp. 1_1_14] gi|298260188|gb|EFI03058.1| polyprenyl synthetase [Bacteroides sp. 1_1_14] Length = 324 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 10/193 (5%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 D +++ IR GK +R LV A L+ L ++E +H SL+HDD+ +D Sbjct: 34 DSVITHIRKR--NGKMMRPILVLLVARLYGAVTPATLHAAVSLELLHTASLVHDDV--VD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 RRG+ +V+ ++ +++AG+ LL A ++ + +T + IR L+ SL + Sbjct: 90 ESTERRGQLSVNAVFNNKVSVLAGDYLL--ATSLVHAEQTNNYEIIR--LVSSLGQKLAE 145 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 +L Q+ ++ + E F + + KT AL E+ A+ + E R GE Sbjct: 146 GELL--QLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEY 203 Query: 217 LGIIFQLADDLLD 229 +GI FQ+ DD+ D Sbjct: 204 IGICFQIKDDIFD 216 >gi|315504299|ref|YP_004083186.1| polyprenyl synthetase [Micromonospora sp. L5] gi|315410918|gb|ADU09035.1| Polyprenyl synthetase [Micromonospora sp. L5] Length = 355 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 33/212 (15%) Query: 41 SAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNG 98 +A+R+ L GGK++R F + + V AA +E H ++LIHDD+ +D Sbjct: 42 TAVRWFVLAGGKRMRPLFCYWGWRGFGGPDASPIVVAAASLELFHAFALIHDDI--VDRS 99 Query: 99 YIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLK 139 RRG PT+H Y A++ G+ T++ ++ P +L+ Sbjct: 100 DRRRGAPTLHRFFAELHAASGWPGDPAAYGRQAAVLCGDLCATWSAQMFHGCGLPPERLR 159 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGAL-MCFACESG 196 R ++L+ + ++ G+ LD+ D + + ++KT + + G Sbjct: 160 ---RGHVLLARMRSE----VIAGEYLDVVGAAGDGSVANALTVVRLKTARYTVTRPVQIG 212 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A +A A+ E L FG+ LG FQL DDLL Sbjct: 213 AALAGAAPEEVAALAGFGDPLGDAFQLRDDLL 244 >gi|296242804|ref|YP_003650291.1| polyprenyl synthetase [Thermosphaera aggregans DSM 11486] gi|296095388|gb|ADG91339.1| Polyprenyl synthetase [Thermosphaera aggregans DSM 11486] Length = 365 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 104/238 (43%), Gaps = 42/238 (17%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVG 76 D L + AS + + A Y L GGK+IR+FL ++ +V+ ++ L Sbjct: 24 DALEKEASEVSPHLSSIPYIARDYTLRGGKRIRAFLALVGYWSKAWGTGDVDRVSKLM-- 81 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE----------------VTAIIAG 120 A +E + Y L+HDD+ MD +RRG PTVH+ + E AI G Sbjct: 82 ATLELLQSYLLVHDDIMDMDE--LRRGGPTVHVWFKEECLKTRVSSNCAHYGVSQAITVG 139 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDET 175 + L A E ++ LK + L T++ GL+ + GQ LD+ + E Sbjct: 140 DYLEATAVENLA----MLKLPGEAFEKLITTYSRGLRKVAYGQYLDVLYSSLPLARVGEN 195 Query: 176 QVFMIQKMKTGALMC-FACESGAIMAHASQNEKER----LRCFGENLGIIFQLADDLL 228 + ++ K+KT + GAI AS +R L + GI FQL DD++ Sbjct: 196 DILVVHKLKTASYTVELPLHLGAI---ASLKYTDRLLNELSSYAIPAGIAFQLRDDII 250 >gi|108743210|dbj|BAE95384.1| hexaprenyl pyrophosphate synthetase [Saccharomyces bayanus] Length = 359 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 42/195 (21%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132 R+ +E IH SL+HDD+ +D RRG+PT + + A++AG+ LL A IS Sbjct: 148 RLAEIVEMIHTASLLHDDV--IDYSDKRRGRPTGNAAFTNKMAVLAGDFLLGRATVSISR 205 Query: 133 ------------------------------SPKTQLKDN------IRSQLMLSLTHNIGL 156 P T DN + S+ + H + Sbjct: 206 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDPDTDTIDNGHKLLPVPSKKLEVKEHEFRV 265 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G L D+ I+ + I K +KT AL+ +C AI++ ++ + FG Sbjct: 266 PSRQQGLQLS-HDQLIETAFEYYIHKTYLKTAALISKSCRCAAILSGSTPAVVDECYDFG 324 Query: 215 ENLGIIFQLADDLLD 229 NLGI FQL DD+LD Sbjct: 325 RNLGICFQLVDDMLD 339 >gi|124025385|ref|YP_001014501.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. NATL1A] gi|123960453|gb|ABM75236.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. NATL1A] Length = 323 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 19/188 (10%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L++ + L ++ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLISRALTSEKELPLKHRKLAQITEMIHTASLVHDDV--VDEADTRRGVE 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH ++D A++AG+ L A +++ + + S++++ L QG+ Sbjct: 102 TVHSRFDPRIAVLAGDFLFAQASWHLANLENLEVVKLLSRVIMDLAEGEIKQGL------ 155 Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + F D +Q F ++K KT +L+ + ++ +++ Q L FG LG+ F Sbjct: 156 ---NRF-DSSQSFESYLEKSYCKTASLIANSSKAIGVLSDVDQESLNSLYFFGRQLGLAF 211 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 212 QVVDDILD 219 >gi|270159180|ref|ZP_06187836.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968] gi|289165992|ref|YP_003456130.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] gi|269987519|gb|EEZ93774.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968] gi|288859165|emb|CBJ13094.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] Length = 322 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV ++ + + A +E H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLTSNACGYQGQDHIDLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEI---ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + +I+ G+ L T + E+ I++P+ LK R+ L +S Q+ Sbjct: 101 NIWGSKASILVGDYLFTQSIELMVDINNPEV-LKLFARTALEISCGE--------VKQLT 151 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + + + + F + + KT L A G I++++S+ + L +G +LG FQL D Sbjct: 152 NRHNPALTFEEYFDVIRAKTALLFAAAACIGPILSNSSKEMQNALYAYGLHLGNAFQLID 211 Query: 226 DLLD 229 D LD Sbjct: 212 DALD 215 >gi|253574559|ref|ZP_04851900.1| heptaprenyl diphosphate synthasecomponent II [Paenibacillus sp. oral taxon 786 str. D14] gi|251846264|gb|EES74271.1| heptaprenyl diphosphate synthasecomponent II [Paenibacillus sp. oral taxon 786 str. D14] Length = 326 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 24/198 (12%) Query: 49 GGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+IR +V S F + + R+ AA E IH SLIHDD+ +D+ +RRG+ Sbjct: 45 GGKRIRPLMVI-VGSRFGPDPDEKKVWRLAAAAEFIHAASLIHDDI--IDDSPMRRGQKA 101 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG----- 161 +HI+ A+ GN + E+IS + R + + L+ + LG Sbjct: 102 MHIKLGVSGALHVGNYMSARVIELISVYSAE-----REKFVYDLSSLATTKLCLGEYQQL 156 Query: 162 GQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 + D DE+++++ K KT LM + GA A A E L FGE LG Sbjct: 157 SHLFDYDVTIDEYLEKS------KNKTAQLMATCLQIGAKAAGADTETAELLYSFGEKLG 210 Query: 219 IIFQLADDLLDCEEDLPK 236 + FQ+ DD+LD + K Sbjct: 211 MSFQIRDDVLDYTQSAEK 228 >gi|218438214|ref|YP_002376543.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7424] gi|218170942|gb|ACK69675.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7424] Length = 323 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR LV++ L R+ E IH SL+HDD+ +D +RR P Sbjct: 44 GGKRIRPAIVLLVSKATMLDQEITSRHRRLAEITEMIHTASLVHDDV--VDEAELRRNVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TV+ +D A++AG+ L + +++ DN+ +LS +G + Q + Sbjct: 102 TVNSLFDNRIAVLAGDFLFAQSSWYLAN-----LDNLEVVKLLSEVIRDFAEGEIQ-QGI 155 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D I KT +LM + ++ ++++ ++ E L +G LG+ FQ+ D Sbjct: 156 NQFDTGITLDAYLEKSYYKTASLMANSAKAASVLSDVGRDITEHLYNYGRYLGLAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|218245257|ref|YP_002370628.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8801] gi|257058290|ref|YP_003136178.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8802] gi|218165735|gb|ACK64472.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8801] gi|256588456|gb|ACU99342.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8802] Length = 323 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR LV+ L R+ E IH SL+HDD+ +D +RR P Sbjct: 44 GGKRIRPAIVLLVSRATMLEREITPRHRRLAEITEMIHTASLVHDDV--VDEAELRRNVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TV+ +D A++AG+ L + +++ + S+++ LQG+ Sbjct: 102 TVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEILQGINRFDTT 161 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +++++ KT +L+ + ++ A+++ + + + L +G +LG+ FQ+ D Sbjct: 162 LTLEAYLEKSY------YKTASLIANSAKAAAVLSDSPREMIDHLYDYGRDLGLAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|294055567|ref|YP_003549225.1| Dimethylallyltranstransferase [Coraliomargarita akajimensis DSM 45221] gi|293614900|gb|ADE55055.1| Dimethylallyltranstransferase [Coraliomargarita akajimensis DSM 45221] Length = 344 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 22/226 (9%) Query: 16 IDTILDDL--LLQT-ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNV 67 + LDDL LQ+ + M+ + D +RY GK++R LV E +L Sbjct: 24 VKPYLDDLDVFLQSQVAEMEPEVQDH----VRYVFGHSGKRLRPMLVAYSGWEGPALTRA 79 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + L +++G+ IE +H +L+HDD+ +D R + T ++ A++ G+ L ++A Sbjct: 80 DDL--VKLGSVIELVHLATLVHDDI--LDEADTRHRQETAAKKFGPAAAVLIGDVLFSHA 135 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 ++ + T +Q + Q G+ ++ EF F + ++KT Sbjct: 136 LKLAAEFDTNEVCRTVAQATSRVCAGEIAQTYQRGE-VNYSREFY-----FRVIQLKTAE 189 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L +C GA +A + E FG +LGI +Q+ DDL+D D Sbjct: 190 LFEVSCRLGAKVAGYTDEFSEAAGLFGRHLGIAYQIFDDLVDLYAD 235 >gi|254508603|ref|ZP_05120719.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 16] gi|219548454|gb|EED25463.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 16] Length = 260 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 11/165 (6%) Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 H TA A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F Sbjct: 3 HTTA---AAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSF 57 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 +++ T+L +++ ++S N+ +G + Q+++ D E + KT L Sbjct: 58 QMM----TELG-SMKILKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEEIYMDVIYSKTARL 111 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GAI+ A ++ + L+ +G+ LG FQL DD++D D Sbjct: 112 FEAATQIGAILNDAPEDVETALQNYGKYLGTAFQLIDDVMDYTSD 156 >gi|332639921|pdb|3RMG|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Bacteroides Thetaiotaomicron gi|332639922|pdb|3RMG|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Bacteroides Thetaiotaomicron Length = 334 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 10/193 (5%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 D +++ IR GK +R LV A L+ L ++E +H SL+HDD+ +D Sbjct: 36 DSVITHIRKR--NGKMMRPILVLLVARLYGAVTPATLHAAVSLELLHTASLVHDDV--VD 91 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 RRG+ +V+ ++ +++AG+ LL A ++ + +T + IR L+ SL + Sbjct: 92 ESTERRGQLSVNAIFNNKVSVLAGDYLL--ATSLVHAEQTNNYEIIR--LVSSLGQKLAE 147 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 +L Q+ ++ + E F + + KT AL E+ A+ + E R GE Sbjct: 148 GELL--QLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEY 205 Query: 217 LGIIFQLADDLLD 229 +GI FQ+ DD+ D Sbjct: 206 IGICFQIKDDIFD 218 >gi|301091604|ref|XP_002895983.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262095707|gb|EEY53759.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 436 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 33/205 (16%) Query: 49 GGKKIRS---FLVTECASLFN--------------VNHLTALRVGAAIECIHCYSLIHDD 91 GGKK+R LV+ A H R+ E IH SL+HDD Sbjct: 143 GGKKVRPTMVLLVSRAAEAHRRATDTPLPETQSEEYMHAAQQRLAEITEMIHTASLMHDD 202 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D RRG+P+V+ + A++AG+ LL + +++ +L++ +LM Sbjct: 203 V--IDEADTRRGRPSVNKVFGGKMAVLAGDFLLARSSVLLA----RLRNLEAVELM---- 252 Query: 152 HNIGLQGMLGGQML-----DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + ++ ++ G+++ D +D+ KTG+LM +C++ + Q+ Sbjct: 253 -STSIEHLVKGEVMQMKNADARDDISPFEYYLRKNYYKTGSLMSNSCKAALALGKHDQHI 311 Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231 + FG ++G+ FQL DD+LD E Sbjct: 312 CDLGFAFGRHIGLAFQLIDDVLDYE 336 >gi|225020305|ref|ZP_03709497.1| hypothetical protein CORMATOL_00308 [Corynebacterium matruchotii ATCC 33806] gi|224947049|gb|EEG28258.1| hypothetical protein CORMATOL_00308 [Corynebacterium matruchotii ATCC 33806] Length = 343 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 17/185 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R + T AS + + + +E H +L HDD+ MD +RRG P+ Sbjct: 64 GGKRFRP-MFTLLASNYGPRPMCEDVFKAAVVVEMTHLATLYHDDV--MDEAQMRRGVPS 120 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++++ AI++G+ LL +A I+S + + G ++ GQM + Sbjct: 121 ANMRWSNSVAILSGDILLAHASRIMS--------ELGVDTVAHFAETFG--ALVTGQMRE 170 Query: 167 IQDEFI-DETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D + +M + KTG L+ A GA+ + A L+ G +G++FQ+ Sbjct: 171 TEGPGTGDPIEHYMKVINEKTGVLIAAAGYLGALHSGADMETAVCLQAVGTAVGMVFQIV 230 Query: 225 DDLLD 229 DD++D Sbjct: 231 DDIID 235 >gi|296168327|ref|ZP_06850251.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896758|gb|EFG76391.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 332 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 24/229 (10%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 G + +++ RI+ ++D L +A + T L A GGK+ R A Sbjct: 11 GFAATVRDGVGRIEQLMDTELC-SADEVMTDSLTHLFKA------GGKRFRPLFTVLSAQ 63 Query: 64 L-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + N + GA IE +H +L HDD+ MD +RRG PT ++++ AI+AG+ Sbjct: 64 IGPNPDAHEVTIAGAVIELVHLATLYHDDV--MDEAEVRRGAPTANVRWGNNVAILAGDY 121 Query: 123 LLTYAFEIIS--SPKT-QLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 L A ++S P+ +L +QL+ + GL G G D + + Sbjct: 122 LFATASRLVSLLGPEAVRLIAETFAQLVTGQMRETRGLTGAAEGA---------DPVEHY 172 Query: 179 M-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + KT L+ A GA+ + A + ERL G +G FQ++DD Sbjct: 173 LKVVYEKTACLIAAAGRFGAMFSGADAEQVERLSRLGGIVGTAFQISDD 221 >gi|284992911|ref|YP_003411465.1| trans-hexaprenyltranstransferase [Geodermatophilus obscurus DSM 43160] gi|284066156|gb|ADB77094.1| Trans-hexaprenyltranstransferase [Geodermatophilus obscurus DSM 43160] Length = 352 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 17/185 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R L A L + + E H +L HDD+ MD +RRG P+ + Sbjct: 73 GGKRFRPLLALLAAELGDPHGQGVTEAAVVCELTHLATLYHDDV--MDEAVVRRGAPSAN 130 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKT-QLKDNIRSQLMLS-LTHNIGLQGMLGGQM 164 ++ AI+ G+ L A ++++ P+ +++ +L+ + +G Q Sbjct: 131 SRWSNSIAILTGDFLFARASDLLADLGPEAVRIQARTFERLVTGQIRETVGAQ-----PG 185 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D D ++D + KTG+L+ + GA A L FGE +G+ FQL+ Sbjct: 186 DDPVDHYLD------VLADKTGSLVATSARFGASFAGVDAELVTALTAFGEEVGVAFQLS 239 Query: 225 DDLLD 229 DDLLD Sbjct: 240 DDLLD 244 >gi|78358229|ref|YP_389678.1| trans-hexaprenyltranstransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220634|gb|ABB39983.1| Trans-hexaprenyltranstransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 322 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 20/187 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + ++E +H +L+HDD+ +D+ +RRG P H Sbjct: 41 GGKRLRPLLAILFARALGRGGDDIYPLACSVELLHSATLLHDDI--IDDAALRRGLPAAH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + I+AG+ LL A I+S T+L + I ++ + T G++ +I Sbjct: 99 TLFGSTRTILAGDALLALANLIVSRYGDTRLTECIARAIIETAT----------GEIAEI 148 Query: 168 QDEFIDET-----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 E++ T I K KT ++ +C+ GAI A A+ +++ FG NLGI FQ Sbjct: 149 --EYLRSTGHPQETYIEIIKGKTAWMIQASCQLGAIAAGATAQQEQAACDFGMNLGIAFQ 206 Query: 223 LADDLLD 229 + DD LD Sbjct: 207 IVDDALD 213 >gi|289435279|ref|YP_003465151.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171523|emb|CBH28067.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 321 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 105/195 (53%), Gaps = 18/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L +R AIE IH S++HDD+ + +RRG+ T+ Sbjct: 44 GGKRIRPMFVCLSARLVPTADFEMVRDASVAIELIHMASIVHDDVVDDAD--LRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD + + MLS N+ ++ + G++ + Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKD-VAAHKMLS---NVTVE-LSTGEIEQL 152 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G I++ S+++ E+L FG +G+ FQ+ Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGIVSGQSESDYEKLYRFGYYVGMAFQIT 212 Query: 225 DDLLD---CEEDLPK 236 DD+LD E++L K Sbjct: 213 DDVLDFVGTEKELGK 227 >gi|29348670|ref|NP_812173.1| octaprenyl-diphosphate synthase [Bacteroides thetaiotaomicron VPI-5482] gi|29340575|gb|AAO78367.1| octaprenyl-diphosphate synthase [Bacteroides thetaiotaomicron VPI-5482] Length = 324 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 10/193 (5%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 D +++ IR GK +R LV A L+ L ++E +H SL+HDD+ +D Sbjct: 34 DSVITHIRKR--NGKMMRPILVLLVARLYGAVTPATLHAAVSLELLHTASLVHDDV--VD 89 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 RRG+ +V+ ++ +++AG+ LL A ++ + +T + IR L+ SL + Sbjct: 90 ESTERRGQLSVNAIFNNKVSVLAGDYLL--ATSLVHAEQTNNYEIIR--LVSSLGQKLAE 145 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 +L Q+ ++ + E F + + KT AL E+ A+ + E R GE Sbjct: 146 GELL--QLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEY 203 Query: 217 LGIIFQLADDLLD 229 +GI FQ+ DD+ D Sbjct: 204 IGICFQIKDDIFD 216 >gi|4580645|gb|AAD24462.1|AF118855_1 trans-prenyltransferase [Mus musculus] gi|20071107|gb|AAH26820.1| Pdss1 protein [Mus musculus] Length = 336 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H A + A+ E IH +L+HDD+ +D+ RR Sbjct: 54 GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 111 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++S+ + ++ ++ G Sbjct: 112 GKHTVNKIWGEKKAVLAGDLILSAASVALA--------RIGNTAVVSMLAQV-IEDLVRG 162 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 163 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 222 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 223 AFQLIDDVLD 232 >gi|305679797|ref|ZP_07402607.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266] gi|305660417|gb|EFM49914.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266] Length = 343 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 17/185 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R + T AS + + + +E H +L HDD+ MD +RRG P+ Sbjct: 64 GGKRFRP-MFTLLASNYGPRPMCEDVFKAAVVVEMTHLATLYHDDV--MDEAQMRRGVPS 120 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++++ AI++G+ LL +A I+S + + G ++ GQM + Sbjct: 121 ANMRWSNSVAILSGDILLAHASRIMS--------ELGVDTVAHFAETFG--ALVTGQMRE 170 Query: 167 IQDEFI-DETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D + +M + KTG L+ A GA+ + A L+ G +G++FQ+ Sbjct: 171 TEGPGTGDPIEHYMKVINEKTGVLIAAAGYLGALHSGADMETAVCLQAVGTAVGMVFQIV 230 Query: 225 DDLLD 229 DD++D Sbjct: 231 DDIID 235 >gi|251781555|ref|YP_002995856.1| hypothetical protein SDEG_0124 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390183|dbj|BAH80642.1| hypothetical protein SDEG_0124 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126348|gb|ADX23645.1| polyprenyl synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 326 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 12/189 (6%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK +R +L +E +V+ L++ ++E +H +LIHDD+ +D+ +RRG+ Sbjct: 44 GGKYLRPAFFYLFSEFGQEESVDEDKLLKIATSLEILHMATLIHDDI--IDDSPLRRGQE 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T+ Q+ + A+ G+ L T FE I+ S I ++ M + L G L Sbjct: 102 TIQSQFGKDVAVYTGDLLFTVFFELILESMANTPYMTINAKTMKKI-----LMGELNQMH 156 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 L E + + I KT L A + GA A G N+G+ FQ+ Sbjct: 157 LQFNQEQTIRSYLHSISG-KTAELFRLASKEGAYFGGADGKIVALAGRIGFNIGMAFQIL 215 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 216 DDILDYTAD 224 >gi|159898866|ref|YP_001545113.1| polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|159891905|gb|ABX04985.1| Polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 326 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 19/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R+ +V + L +L A+E IH SL+HDDL +D+ RRGK TVH Sbjct: 47 GGKRLRAMMVLLASQLGRYRLSDSLHAATAVELIHAASLVHDDL--VDDADRRRGKVTVH 104 Query: 109 IQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLML---SLTHNIGLQGMLGGQM 164 ++D+ A++ G+ L A E+ +P ++ +M S H + + + Sbjct: 105 AKWDQGVALMVGDYLFAVAAGEMALAPDPRVIQIFAESVMTISASELHPV-MATLPTATA 163 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 L+ Q + KT AL A +G + S E E +G ++G+ FQ+ Sbjct: 164 LE---------QYYAKIGGKTAALFEAAAAAGVVCGGGSPEEIEAAARYGYDIGLAFQIV 214 Query: 225 DDLLD---CEEDLPK 236 DD+LD EE L K Sbjct: 215 DDILDFVSTEETLGK 229 >gi|325967740|ref|YP_004243932.1| polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28] gi|323706943|gb|ADY00430.1| Polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28] Length = 343 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 33/210 (15%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + ++ AL A +E IH YSLI+DD+ +D +RR K TV Sbjct: 42 GGKRLRPLITLTATRACGSDYKVALPAAAIVELIHNYSLIYDDI--IDEALLRRNKLTVR 99 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +Y + AI+ G + E I + +D + + T ++ + G+ LDI Sbjct: 100 AKYGDNAAILIG----IWYREAIEEAILETRDPVSFARETART----IRAIDEGERLDIL 151 Query: 169 DEFIDETQVFMIQ----------------------KMKTGALMCFACESGAIMAHASQNE 206 E+ + ++ +KT AL+ + GA+ A+ Sbjct: 152 LEYSGRKDPYFVENRLGPRLLSNWESLYNTYIKMISLKTAALIRASSVFGAMSANTPHCV 211 Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236 K L +G LG+ FQ+ DD+LD D+ K Sbjct: 212 KA-LSDYGTYLGLAFQVLDDILDIFGDVKK 240 >gi|118593444|ref|ZP_01550824.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata IAM 12614] gi|118433923|gb|EAV40581.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata IAM 12614] Length = 338 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L CA +F + + A++E +H +L+HDD+ +D +RRGK Sbjct: 57 GGKRLRPMLTLACADMFGYQGDGHVTLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +LS + +G + Q+ + Sbjct: 115 KLWGNQASVLVGDYLLGQAFKMMVDVGS-----LEALRILSTASAVIAEGEVL-QLGAAK 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + KT AL A E G ++A S K R +G LG FQL DD L Sbjct: 169 NIATTEADYLRVIEAKTAALFAAAAEVGPVIAGQSAEMKRAARTYGMELGYAFQLVDDAL 228 Query: 229 D 229 D Sbjct: 229 D 229 >gi|113952964|ref|YP_730756.1| solanesyl diphosphate synthase [Synechococcus sp. CC9311] gi|113880315|gb|ABI45273.1| solanesyl diphosphate synthase [Synechococcus sp. CC9311] Length = 323 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 13/185 (7%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +V + + + L++ R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLISRALSADGELSSRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVE 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +++ A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFNYRVAVLAGDFLFAQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLF---RF 158 Query: 166 DIQDEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D F + ++ + KT +L+ + ++ +++ S+ + E L +G LG+ FQ+ Sbjct: 159 DTGQSF----ETYLEKSYCKTASLIANSAKAAGVLSGLSEPQLESLYHYGRQLGLAFQVV 214 Query: 225 DDLLD 229 DD+LD Sbjct: 215 DDILD 219 >gi|87124214|ref|ZP_01080063.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. RS9917] gi|86167786|gb|EAQ69044.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Synechococcus sp. RS9917] Length = 323 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 19/188 (10%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +V + +L LTA R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLISRALSPSGDLTARHRRLAEITEMIHTASLVHDDV--VDEAATRRGVA 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +++ A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFR---- 157 Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D Q F ++K KT +L+ + ++ +++ S + + L +G LG+ F Sbjct: 158 ------YDTGQTFATYLEKSYCKTASLIANSAKAAGVLSGESPDHLQALYHYGRQLGLAF 211 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 212 QVVDDILD 219 >gi|297192159|ref|ZP_06909557.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC 25486] gi|197720196|gb|EDY64104.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC 25486] Length = 345 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 13/184 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV + A+R AA+E H ++L+HDD+ +D RR +PT Sbjct: 61 GKAVRPALVLAACQALGGDPRQAVRAAAAVELAHNFTLLHDDV--IDEDPTRRHRPTAWS 118 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + AIIAG+ + A +++ + +L + + GQ D Sbjct: 119 VFGTADAIIAGDAMSALALRLLAEDRHPASGPAAVRLAACVIE------LCAGQQADCAF 172 Query: 170 EFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E +V + + KTGAL+ AC GA+ A A + + + FG G+ FQL Sbjct: 173 EERPPLEVTLEECLAMATAKTGALLGCACALGALYAGADEEQAAAMDAFGREAGLAFQLI 232 Query: 225 DDLL 228 DDL+ Sbjct: 233 DDLI 236 >gi|313632621|gb|EFR99606.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri FSL N1-067] Length = 324 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 105/195 (53%), Gaps = 18/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L +R AIE IH S++HDD+ + +RRG+ T+ Sbjct: 47 GGKRIRPMFVCLSARLVPTADFEMVRDASVAIELIHMASIVHDDVVDDAD--LRRGRETI 104 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD + + MLS N+ ++ + G++ + Sbjct: 105 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKD-VAAHKMLS---NVTVE-LSTGEIEQL 155 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G I++ S+++ E+L FG +G+ FQ+ Sbjct: 156 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGIVSGQSESDYEKLYRFGYYVGMAFQIT 215 Query: 225 DDLLD---CEEDLPK 236 DD+LD E++L K Sbjct: 216 DDVLDFVGTEKELGK 230 >gi|254389342|ref|ZP_05004570.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|197703057|gb|EDY48869.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 355 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 28/181 (15%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------IQYDEV------TAIIAG 120 AA+E H ++LIHDD+ MD+ RRG PTVH + D+ TAI+ G Sbjct: 80 AALEMFHAFALIHDDI--MDDSATRRGSPTVHRALADRLGAALDPDQAGQLGVSTAILVG 137 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQV 177 + LT++ E++ +P T R +L L + + + GQ LDI + D + Sbjct: 138 DLALTWSDELLYAPLTP----HRLAAVLPLVTAMRAE-TVHGQYLDITSARRPGTDTSLA 192 Query: 178 FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KT A M GA +A A L + G FQLADDLL D P+ Sbjct: 193 LRIARYKTAAYTMERPLHIGAALAGARPELLAGLSAYALPAGEAFQLADDLLGVFGD-PR 251 Query: 237 K 237 + Sbjct: 252 R 252 >gi|260203719|ref|ZP_05771210.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis K85] gi|289573154|ref|ZP_06453381.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis K85] gi|289537585|gb|EFD42163.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis K85] Length = 335 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 16/182 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A + + GA IE IH +L HDD+ MD +RRG P+ Sbjct: 55 GGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV--MDEAQVRRGAPSA 112 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + Q+ AI+AG+ LL A +++ + I + +T GQM + Sbjct: 113 NAQWGNNVAILAGDYLLATASRLVARLGPEAVRIIADTVAQLVT----------GQMRET 162 Query: 168 Q--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + E +D + ++ + + KTG+L+ A G + + A+ + ERL G +G FQ+A Sbjct: 163 RGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIA 222 Query: 225 DD 226 DD Sbjct: 223 DD 224 >gi|323127266|gb|ADX24563.1| geranylgeranyl pyrophosphate synthase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 332 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 10/162 (6%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L + AAIE H +LIHDD+ +D +RR +H Y AI AG+ LL+YA + + Sbjct: 70 LYLAAAIETFHLATLIHDDV--IDEAELRRNIKPLHQVYSNKIAIYAGDYLLSYAGRLAT 127 Query: 133 --SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ-KMKTGA 187 + +KDN L +++ ++ +L G++ + ++ + + ++ Q K KT Sbjct: 128 RGAQLLNIKDNWEDNG--PLPYHV-VERILAGELAQLMNQHNSQMTMKAYLKQIKGKTAF 184 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L AC+ G Q + G LG+ FQL+DDL+D Sbjct: 185 LFGLACQLGTWYPKIPQKTSKAAYQLGIFLGMAFQLSDDLID 226 >gi|322411728|gb|EFY02636.1| geranylgeranyl pyrophosphate synthase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 332 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 10/162 (6%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L + AAIE H +LIHDD+ +D +RR +H Y AI AG+ LL+YA + + Sbjct: 70 LYLAAAIETFHLATLIHDDV--IDEAELRRNIKPLHQVYSNKIAIYAGDYLLSYAGRLAT 127 Query: 133 SPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ-KMKTGA 187 +KDN L ++I ++ +L G++ + ++ + + ++ Q K KT Sbjct: 128 RGAQLLNIKDNWEDNG--PLPYHI-VERILAGELAQLMNQHNSQMTMKAYLKQIKGKTAF 184 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L AC+ G Q + G LG+ FQL+DDL+D Sbjct: 185 LFGLACQLGTWYPKIPQKTSKAAYQLGIFLGMAFQLSDDLID 226 >gi|319949926|ref|ZP_08023925.1| putative polyprenyl synthase [Dietzia cinnamea P4] gi|319436405|gb|EFV91526.1| putative polyprenyl synthase [Dietzia cinnamea P4] Length = 359 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 98/249 (39%), Gaps = 58/249 (23%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-------FLVT 59 + + E R+ +L D +L M+ R+AL G R +VT Sbjct: 32 AAIDERVDRLAGLLSDFVLDGGKRMRP----------RFALAGWAASRPDAGPAPEEVVT 81 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------- 108 CA+L E I +L+HDD+ +D RRG+PTVH Sbjct: 82 ACAAL---------------ELIQACALVHDDI--VDASDTRRGRPTVHRAIESAHRRDG 124 Query: 109 -----IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 +Y AI+ G+ L++A E+ T D L H + + +L GQ Sbjct: 125 WDGDAARYGVSQAILVGDLALSWADEMFV---TSGVDPAALGRALGPWHAMKTE-VLSGQ 180 Query: 164 MLDIQDEF---IDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGI 219 MLDI E DE + + KT A GA +A A+ LR FG +G Sbjct: 181 MLDILAEASGATDEQTPARVNRFKTAAYTVERPLHIGAELAGATDETVAALREFGVAVGQ 240 Query: 220 IFQLADDLL 228 FQL DDLL Sbjct: 241 AFQLRDDLL 249 >gi|90962003|ref|YP_535919.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / heptaprenyl diphosphate synthase component II [Lactobacillus salivarius UCC118] gi|90821197|gb|ABD99836.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase / Farnesyltransferase / Heptaprenyl diphosphate synthase component II [Lactobacillus salivarius UCC118] Length = 328 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 20/193 (10%) Query: 49 GGKKIRS-----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK +R F S V+ + + ++E +H +LIHDD+ +D+ RRG Sbjct: 45 GGKFLRPAFFLLFTKLTADSQNRVDDKKLIDIATSLEVLHMSTLIHDDI--IDDSPKRRG 102 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + +V Q+ + A+ AG+ L T F++I+ DN+ + ++ +L G+ Sbjct: 103 EVSVQSQFGKDIAVYAGDYLFTVFFDLIT-------DNVLDTPFFKINSRT-MKKILLGE 154 Query: 164 MLDIQDEFIDETQVFM--IQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + ++ + + Q F+ ++ + KT L A GA AS G+N+GI Sbjct: 155 LNQMKHRY-NTQQTFLNYLRNVNGKTAYLFRLASAEGAYFGGASSQTVSLATRIGQNIGI 213 Query: 220 IFQLADDLLDCEE 232 FQ+ DD+LD + Sbjct: 214 SFQILDDILDYSD 226 >gi|170077205|ref|YP_001733843.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7002] gi|169884874|gb|ACA98587.1| Solanesyl diphosphate synthase [Synechococcus sp. PCC 7002] Length = 323 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 17/187 (9%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +V + + LT R+ E IH SL+HDD+ +D +RR P Sbjct: 44 GGKRVRPAIVLLASRATLGDRPLTQRHRRLAEITEMIHTASLVHDDV--VDEAALRRSVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH---NIGLQGMLGG 162 TV+ +D A++AG+ L + +++ + S+++ GL G Sbjct: 102 TVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLTVVKLLSEVIKDFAEGEIQQGLNRFDTG 161 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 L+I +I+++ KT +L+ + ++ A+++ +RL +G NLG+ FQ Sbjct: 162 MNLEI---YIEKSY------YKTASLIGNSAKAAAVLSEVDPEIGDRLYDYGRNLGLAFQ 212 Query: 223 LADDLLD 229 + DD+LD Sbjct: 213 IVDDILD 219 >gi|291449974|ref|ZP_06589364.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291352923|gb|EFE79825.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 435 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 23/158 (14%) Query: 44 RYALLGGKKIRS----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 R+ LGG+++R + + CA ALRVGAA+E + +L+HDD+ MD+ Sbjct: 122 RFTSLGGRRLRPALLWWALRACALPDGDRARAALRVGAAVELLQTCALVHDDV--MDSSR 179 Query: 100 IRRGKPTVHI----QYDE--------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +RRG+P +H+ QY A++AG+ L +A + ++ +T+L D +R ++ Sbjct: 180 LRRGRPALHVSLADQYGAAGTDLFAGAAAVLAGDLALAWAEDTLA--ETELPDPVRRRVR 237 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMIQKMK 184 G M+ GQ LD+ + D + + ++ + Sbjct: 238 AVWRVMRGE--MVAGQYLDLHGQVTADRSALLALRTAR 273 >gi|227891019|ref|ZP_04008824.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / heptaprenyl diphosphate synthase component II [Lactobacillus salivarius ATCC 11741] gi|227867428|gb|EEJ74849.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / heptaprenyl diphosphate synthase component II [Lactobacillus salivarius ATCC 11741] gi|300214709|gb|ADJ79125.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase / Farnesyltransferase / Heptaprenyl diphosphate synthase component II [Lactobacillus salivarius CECT 5713] Length = 328 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 20/193 (10%) Query: 49 GGKKIRS-----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK +R F S V+ + + ++E +H +LIHDD+ +D+ RRG Sbjct: 45 GGKFLRPAFFLLFTKLTADSQNRVDDKKLIDIATSLEVLHMSTLIHDDI--IDDSPKRRG 102 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + +V Q+ + A+ AG+ L T F++I+ DN+ + ++ +L G+ Sbjct: 103 EVSVQSQFGKDIAVYAGDYLFTVFFDLIT-------DNVLDTPFFKINSRT-MKKILLGE 154 Query: 164 MLDIQDEFIDETQVFM--IQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + ++ + + Q F+ ++ + KT L A GA AS G+N+GI Sbjct: 155 LNQMKHRY-NTQQTFLNYLRNVNGKTAYLFRLASAEGAYFGGASSQTVSLATRIGQNIGI 213 Query: 220 IFQLADDLLDCEE 232 FQ+ DD+LD + Sbjct: 214 SFQILDDILDYSD 226 >gi|227548900|ref|ZP_03978949.1| geranylgeranyl pyrophosphate synthase [Corynebacterium lipophiloflavum DSM 44291] gi|227079028|gb|EEI16991.1| geranylgeranyl pyrophosphate synthase [Corynebacterium lipophiloflavum DSM 44291] Length = 380 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 41/215 (19%) Query: 45 YALLGGKKIRS-------FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + L GGK+IR F + + + LR +++E I +LIHDD+ +D Sbjct: 63 FILGGGKRIRPLYAWTGFFGARAAGGVGSEDPEAVLRAVSSLELIQACALIHDDI--IDA 120 Query: 98 GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 RRG PTVH Y AI+ G+ L +A ++ + + Sbjct: 121 SDTRRGNPTVHRAVEARHSKDDLFGDSADYGRNEAILIGDFALIWAEDM-------WRYS 173 Query: 142 IRSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES-- 195 S+ L+ +GM +GGQ+LDI E V M + + E Sbjct: 174 GLSEAALTRAAEP-WRGMRTEVIGGQLLDIALEAAANESVEMANNVNRYKTAAYTIERPL 232 Query: 196 --GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A + E R +G ++GI FQL DDLL Sbjct: 233 HLGAAIAGAPADTIEAFRGYGRDIGIAFQLRDDLL 267 >gi|326560787|gb|EGE11154.1| solanesyl diphosphate synthase [Moraxella catarrhalis 103P14B1] gi|326574419|gb|EGE24361.1| solanesyl diphosphate synthase [Moraxella catarrhalis 101P30B1] Length = 331 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A L + A+++ A E +H +L+HDD+ +D +RRGKPT Sbjct: 48 GGKRMRPLITLLTARMLHDEQSQQAMQLAAITEMLHTATLVHDDV--IDASGLRRGKPTA 105 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + +D TA++ G+ L+ +F ++ + L L + G + G++L + Sbjct: 106 NATWDNPTAVLVGDYLIARSFNLLVG---------FNHLPLLKLFSDGTCDIAEGEVLQL 156 Query: 168 QDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q + E+ I KT L A + GA + + + L F + G FQ+ Sbjct: 157 QHQHNPKTLESDYLQIIDGKTSRLFMMATK-GAALLQGREEFLDDLGAFAYHFGNAFQMI 215 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 216 DDVLDFSGD 224 >gi|221134021|ref|ZP_03560326.1| hypothetical protein GHTCC_03754 [Glaciecola sp. HTCC2999] Length = 292 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 20/208 (9%) Query: 35 HNDRLLSA-IRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 H+DRLLS I+Y G R+ + + ++ A+ + +E +H SLIHDD+ Sbjct: 29 HDDRLLSQMIQYHGTSQGNATRALISLYASDALHLRQQDAVAAASIVETLHTASLIHDDI 88 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLS 149 D RRGKP++ Q+ E A+ AG+ L+ A+ IS P TQ+ Q ++ Sbjct: 89 --QDREPHRRGKPSLWHQFGEGPALCAGDFYLSKAYSHCADISQP-TQI------QRLIQ 139 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L H + + GQ DI I T I K+G L+ A ++A +E Sbjct: 140 LVHQ-SITQTISGQTSDITSTDIRTTSQDYETIAINKSGPLLGLALRIPLLLAGYDDDET 198 Query: 208 ERL--RCFGENLGIIFQLADDLLDCEED 233 + +C E + +Q+ DDL D + D Sbjct: 199 QVWMKQCI-EPFALSYQIVDDLFDTQID 225 >gi|240103297|ref|YP_002959606.1| Polyprenyl synthetase [Thermococcus gammatolerans EJ3] gi|239910851|gb|ACS33742.1| Polyprenyl synthetase [Thermococcus gammatolerans EJ3] Length = 309 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 11/181 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + ++ AL + +AIE IH SL+HDD+ +D RR PTV Sbjct: 33 GGKRIRPRITLAVSKGLGLDENDALDLASAIELIHTASLVHDDV--IDLAEKRRNNPTVV 90 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +++ A+++G+ L A II+ K + D + + + I + + G LD+ Sbjct: 91 MRWGPELAVLSGDFLFVRALRIIAKKKAAMVDYVAKAVEDMVKGEILQEAVRGSVHLDLD 150 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I KTG L F + + L G +G FQ+ DD+L Sbjct: 151 -------TYYEIIDRKTGKL--FGAAFALPAYYLEKPYWMELDKAGTLVGRAFQIVDDVL 201 Query: 229 D 229 D Sbjct: 202 D 202 >gi|296117524|ref|ZP_06836108.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306] gi|295969255|gb|EFG82496.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306] Length = 366 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 37/213 (17%) Query: 44 RYALLGGKKIRSF-----LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 R+ L GGK+IR V L + + LR +++E I +LIHDD+ +D Sbjct: 50 RFILGGGKRIRPLYVWAGFVAADGLLGDEDPQAVLRAASSLEFIQSCALIHDDI--VDAS 107 Query: 99 YIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 RRG PTVH + AI+ G+ L +A ++ L D+ Sbjct: 108 DTRRGNPTVHRAVEAEHRKLGWTGDPEAFGRSAAILIGDMSLVWAEDM-------LLDSG 160 Query: 143 RSQLMLSLTHNIGLQ---GMLGGQMLDIQDEFIDETQVFM---IQKMKTGALMC-FACES 195 SQ L T ++GGQ+LD+ E V + + + KT A Sbjct: 161 LSQAALQRTREPWRAMRTEVIGGQLLDVSLEAAAIESVELSDSVNRFKTAAYTIERPLHL 220 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A Q + R +G ++GI FQL DD L Sbjct: 221 GAAIAGAPQKLIDAFRGYGRDIGIAFQLRDDQL 253 >gi|300776952|ref|ZP_07086810.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC 35910] gi|300502462|gb|EFK33602.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC 35910] Length = 325 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 8/180 (4%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R V CA L R + IE IH +L+HDD+ +D + RR +++ Sbjct: 46 GKQMRPMFVFLCAKLVGEVTEKTYRGASMIELIHTATLVHDDV--VDESFKRRNFFSINA 103 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ LL+ + + + K + S+ + ++ LQ + + LDI + Sbjct: 104 LWKNKIAVLVGDYLLSKSVLLSTDHKDYDLLGVISRTIREMSEGELLQ-LEKARKLDITE 162 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + E I + KT L+ CE G + +A + +++ FG G+ FQ+ DDL D Sbjct: 163 DVYYE-----IIRQKTATLIAACCEIGVLSNNADEALAKKMMDFGTFTGMAFQIKDDLFD 217 >gi|301300397|ref|ZP_07206599.1| polyprenyl synthetase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851999|gb|EFK79681.1| polyprenyl synthetase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 328 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 20/193 (10%) Query: 49 GGKKIRS-----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK +R F S V+ + + ++E +H +LIHDD+ +D+ RRG Sbjct: 45 GGKFLRPAFFLLFTKLTADSQNRVDDKKLIDIATSLEVLHMSTLIHDDI--IDDSPKRRG 102 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + +V Q+ + A+ AG+ L T F++I+ DN+ + ++ +L G+ Sbjct: 103 EVSVQSQFGKDIAVYAGDYLFTVFFDLIT-------DNVLDTPFFKINSRT-MKKILLGE 154 Query: 164 MLDIQDEFIDETQVFM--IQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + ++ + + Q F+ ++ + KT L A GA AS G+N+GI Sbjct: 155 LNQMKHRY-NTQQTFLNYLRNVNGKTAYLFRLASAEGAYFGGASSQTVSLATRIGQNIGI 213 Query: 220 IFQLADDLLDCEE 232 FQ+ DD+LD + Sbjct: 214 SFQILDDILDYSD 226 >gi|300932807|ref|ZP_07148063.1| putative polyprenyl diphosphate synthase [Corynebacterium resistens DSM 45100] Length = 340 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 18/193 (9%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 A+ GGK+ R + T A+L+ + + +E H +L HDD+ MD RRG Sbjct: 57 AIAGGKRFR-VVFTLLAALYGDKPTSQNVYKAAVVVELTHLATLYHDDV--MDEADRRRG 113 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + ++++ AI+AG+ L A ++++ + S + ++ GQ Sbjct: 114 ADSANMRWGNSIAILAGDYLFAVASDMLADLGAATVSHFASTF----------RELVTGQ 163 Query: 164 MLDIQD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 M + E D + +M + + KTG L+ A GA + A ++ L FG N+G + Sbjct: 164 MRETVGCAEGEDPIEHYMTVIQEKTGVLIAAAGFLGAEHSGAPAEVRDALHAFGRNMGQV 223 Query: 221 FQLADDLLDCEED 233 FQ+ DD++D D Sbjct: 224 FQIVDDIIDIWSD 236 >gi|326563527|gb|EGE13786.1| solanesyl diphosphate synthase [Moraxella catarrhalis 12P80B1] Length = 348 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A L + A+++ A E +H +L+HDD+ +D +RRGKPT Sbjct: 65 GGKRMRPLITLLTARMLHDEQSQQAMQLAAITEMLHTATLVHDDV--IDASGLRRGKPTA 122 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + +D TA++ G+ L+ +F ++ + L L + G + G++L + Sbjct: 123 NATWDNPTAVLVGDYLIARSFNLLVG---------FNHLPLLKLFSDGTCDIAEGEVLQL 173 Query: 168 QDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q + E+ I KT L A + GA + + + L F + G FQ+ Sbjct: 174 QHQHNPKTLESDYLQIIDGKTSRLFMMATK-GAALLQGREEFLDDLGAFAYHFGNAFQMI 232 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 233 DDVLDFSGD 241 >gi|87311122|ref|ZP_01093246.1| polyprenyl synthetase [Blastopirellula marina DSM 3645] gi|87286213|gb|EAQ78123.1| polyprenyl synthetase [Blastopirellula marina DSM 3645] Length = 616 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 9/195 (4%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+ AL GG+ + + TAL AIE H SL+HDD+ D+ Y R Sbjct: 303 AVYDALTGGEGTSAGGAARVGEYSDSVKRTAL----AIETFHKASLVHDDIED-DDAY-R 356 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGLQGML 160 G T+H +Y TAI G+ ++ + ++S QL +++ L ++ L Sbjct: 357 YGDVTIHRKYGVPTAINLGDYMIGLGYRLVSRDMAQLGGETAGRIIDCLADAHMRLSEGQ 416 Query: 161 GGQML--DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 G ++L D D+ + I +KT A + G +++ ++ +R F ++G Sbjct: 417 GAELLWRDAADKSLKPVDALKIYALKTSPAFEAALQCGVLLSGTEEDYSNSMRQFARHVG 476 Query: 219 IIFQLADDLLDCEED 233 + FQ+ +DL D D Sbjct: 477 VAFQILNDLKDWRGD 491 >gi|331701966|ref|YP_004398925.1| trans-hexaprenyltranstransferase [Lactobacillus buchneri NRRL B-30929] gi|329129309|gb|AEB73862.1| Trans-hexaprenyltranstransferase [Lactobacillus buchneri NRRL B-30929] Length = 325 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 20/192 (10%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK +R ++ +E + + A AA+E +H +LIHDD+ +D IRRG Sbjct: 45 GGKFLRPGFFYIYSEFGQEVDPAKIKA--GAAAVELLHVATLIHDDV--IDESPIRRGIE 100 Query: 106 TVHIQYDEVTAIIAGNGLLT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T+H +Y + AI AG+ L T Y +++ S TQ N++ H +Q +L G++ Sbjct: 101 TIHTEYGQKNAIYAGDYLFTCYFTQVLKS--TQDPANMKR-------HVDAMQTILAGEL 151 Query: 165 LDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 ++ F + E F KT L + A+++ AS + G +G + Sbjct: 152 DQMKYNFNQQMTEADYFHEITGKTAELFRLCFQQSALVSQASDQIFKLGGEIGLTIGQAY 211 Query: 222 QLADDLLDCEED 233 Q+ DD+LD D Sbjct: 212 QILDDILDYSGD 223 >gi|291277470|ref|YP_003517242.1| polyprenyl synthetase [Helicobacter mustelae 12198] gi|290964664|emb|CBG40519.1| polyprenyl synthetase [Helicobacter mustelae 12198] Length = 298 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 108/207 (52%), Gaps = 21/207 (10%) Query: 26 QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85 Q A +++ ++ +L ++ L GK +RS L+ A NH +++ A +E I Sbjct: 11 QIADYIKELESEEILDFCKH-LQNGKMLRSRLILAIAP----NHPDVIKLCAIVEMIQNA 65 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SL+HDD+ +D+ +RRG P+++ + +I+ G+ + AF + ++ +I S Sbjct: 66 SLLHDDV--IDDSLLRRGNPSINALFGNKNSIMLGDVFYSKAFFELLDLDKRITKSI-SD 122 Query: 146 LMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 ++ L+ +G + M+ Q +F+ + MI+ KT +L+ + S +I+A+ Sbjct: 123 CVVRLS-----RGEISDVMMSRAFQPDFL--KYLNMIED-KTASLVASSAMSASILANL- 173 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230 + ++ +G NLGI FQ+ DDLLD Sbjct: 174 --DVKKHYNYGLNLGIAFQIVDDLLDV 198 >gi|40882370|dbj|BAD07374.1| farnesyl diphosphate synthase [Actinoplanes sp. A40644] Length = 362 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 84/209 (40%), Gaps = 31/209 (14%) Query: 45 YALLGGKKIRSFL-----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + L GGK+IR + L + E +H LIHDD+ +D Sbjct: 47 FVLRGGKRIRPTFAWLGWIGAGGDPEGPGAEAVLSACSGFELLHAAGLIHDDI--IDASR 104 Query: 100 IRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 RRG P HI Y E TAI+ G+ L +A ++ + R Sbjct: 105 TRRGHPAAHITYAERHRASRFSGDSQIFGTGTAILIGDLALIWADVLVRGSRLPADAQAR 164 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMC-FACESGAIM 199 + S + ++ GQ+LD+ + D+ V + + KT + + GA + Sbjct: 165 VSPVWSAVRS----EVMYGQLLDLISQARDDEDVDAALRVNRYKTASYTVERPLQFGAAI 220 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228 A AS + R FG LGI FQL DDLL Sbjct: 221 AGASPDLITAYRSFGAGLGIAFQLRDDLL 249 >gi|332669463|ref|YP_004452471.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484] gi|332338501|gb|AEE45084.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484] Length = 334 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 15/188 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L + + + +E H +L HDD+ MD+ +RRG P+ H Sbjct: 51 GGKRLRPLLTLLTAELGDGSRREVVDAATVVELTHLATLYHDDV--MDSAPLRRGAPSAH 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ L A ++ D +R Q + + GQ+ + Sbjct: 109 EVWGNSVAILTGDLLFARASATVAGLG---PDAVRIQAAT-------FERLCLGQLHETV 158 Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E V + KT +L+ + GA+ A + + FGE LG+ FQLAD Sbjct: 159 GPRPGEDPVAHYLQVLADKTASLVATSARFGAMFAGCRPDVVRTVTGFGEKLGVAFQLAD 218 Query: 226 DLLDCEED 233 D++D D Sbjct: 219 DVIDLTSD 226 >gi|297570910|ref|YP_003696684.1| polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296931257|gb|ADH92065.1| Polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 338 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 33/229 (14%) Query: 11 ENSKRIDTILDDLLLQTA-SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FNVN 68 E R+ +DDL++ A SH+ A GGK++R L A L Sbjct: 27 EAQLRLAVQVDDLVVDEATSHL--------------AKAGGKRLRPALCLLTAQLGPRPA 72 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L +E H +L HDD+ MD +RRG P+ Y +AI+AG+ L A Sbjct: 73 SPDVLDSAVVVELTHLATLYHDDV--MDEAPLRRGVPSAQYVYGNSSAILAGDVLFARAS 130 Query: 129 EIIS--SPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 I++ P+ L + M L IG + + +D QV K Sbjct: 131 GIVAKLGPEAVLLHAETFERLCMGQLHETIGPR--------EGEDPIQHHIQVL---ADK 179 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TG+L+ + G + + E + FG+ +G+ FQ+ADD++D D Sbjct: 180 TGSLIAASGRYGVLYSGGDPALAEEIAQFGDKVGVAFQIADDVIDLVSD 228 >gi|315644722|ref|ZP_07897852.1| Polyprenyl synthetase [Paenibacillus vortex V453] gi|315279872|gb|EFU43172.1| Polyprenyl synthetase [Paenibacillus vortex V453] Length = 334 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 13/191 (6%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R +V S F V+ H +A ++ +E +H SL+HDD+ +D +RRG PT Sbjct: 45 GGKRLRPLMVM-LGSRFGVSGHESAVMKTAVLLEYLHMASLVHDDI--IDQSDMRRGMPT 101 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-----LQGMLG 161 +H D TA+ GN ++ A E + + D + + + + + Sbjct: 102 LHETTDVQTAVHIGNYMIARAIEWAAGHPGEESDGASEAVSEEDAYRLAELAALVTELCM 161 Query: 162 GQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 G+ + F + Q + KT LM ++GA A A E L FGE LG Sbjct: 162 GEYDQLHHRFNYDLTMEQYLEKTRCKTALLMAHCLKAGAEAAKADARTAELLFQFGEALG 221 Query: 219 IIFQLADDLLD 229 + FQ+ DDLLD Sbjct: 222 MAFQIRDDLLD 232 >gi|120404508|ref|YP_954337.1| polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1] gi|119957326|gb|ABM14331.1| geranylgeranyl-diphosphate synthase [Mycobacterium vanbaalenii PYR-1] Length = 359 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 32/208 (15%) Query: 45 YALLGGKKIR-SFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 + L GGK++R +F ++ ALR+ +A+E +H +L+HDD+ +D RR Sbjct: 47 FVLRGGKRLRPAFAYWGWRAVAGTEPGPEALRLFSALELLHACALVHDDV--IDASATRR 104 Query: 103 GKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 G PTVH Q+ AI+ G+ L +A +I++S + ++ + R Q Sbjct: 105 GLPTVHRIFAERHRSNNWLGSSEQFGLSAAILLGDVALVWADDIVASAEIGVEAHRRVQR 164 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHAS 203 + + +LGGQ LDI +E V + KT + + A A+ Sbjct: 165 VWAAIRT----EVLGGQYLDIVNEATGAETVASALTVNIYKTASYTI--SRPLQLGAAAA 218 Query: 204 QNEKERLRCF---GENLGIIFQLADDLL 228 + E L F G +LG+ FQL DD+L Sbjct: 219 ADCPEVLSAFHELGTSLGVAFQLRDDVL 246 >gi|306836504|ref|ZP_07469475.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726] gi|304567594|gb|EFM43188.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726] Length = 359 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 37/211 (17%) Query: 45 YALLGGKKIRSFLVTE---CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 + L GGK++R A + + LR +++E I +LIHDD+ +D R Sbjct: 46 FVLDGGKRVRPMYAWAGYLAAGRGSESPEAMLRAASSLEFIQACALIHDDI--IDASNTR 103 Query: 102 RGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 RGKPTVH + + + AI+ G+ L YA ++ +D+ S Sbjct: 104 RGKPTVHREAERLHRESDFLGDPEFFGTSVAILVGDFALVYAEDM-------FQDSGLSP 156 Query: 146 LMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GA 197 L +GM LGGQ+LDI E V + + + E GA Sbjct: 157 EALQRAREP-WRGMRTEVLGGQLLDISLEAAGSESVALSNSVNRYKTAAYTIERPLHLGA 215 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +A A + R +G ++GI +QL DD L Sbjct: 216 AIAGAREELISAFRGYGHDIGIAYQLRDDQL 246 >gi|78777056|ref|YP_393371.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251] gi|78497596|gb|ABB44136.1| Polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251] Length = 295 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 30/207 (14%) Query: 38 RLLSAIRY--------ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 RL+ I Y L GGK++R+ L+ + A TA +GA +E IH SL+H Sbjct: 10 RLIKEIDYDEVTNLFNKLQGGKRLRAGLILKIAPTCT----TAPLLGAIVELIHAASLLH 65 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D +RRG +++ TA++ G+ L + AF + + ++ I S Sbjct: 66 DDV--IDEATLRRGVASINATDGSKTAVMLGDILYSKAFSELVAFDKEIAKVISS----- 118 Query: 150 LTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + + G+M+D++ F DE + + +KT L+ A +Q + Sbjct: 119 -----SVTALSKGEMMDVKMASAFNSDEERYLEMLYLKTATLIEACA---HAAALLAQKD 170 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 +G+NLG+ FQ+ DD+LD D Sbjct: 171 ALSHSIYGKNLGLSFQIIDDILDITSD 197 >gi|15607702|ref|NP_215076.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv] gi|15839960|ref|NP_334997.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31791744|ref|NP_854237.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97] gi|121636480|ref|YP_976703.1| putative polyprenyl-diphosphate synthase grcC1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660331|ref|YP_001281854.1| putative polyprenyl-diphosphate synthase GrcC1 [Mycobacterium tuberculosis H37Ra] gi|148821763|ref|YP_001286517.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis F11] gi|167968365|ref|ZP_02550642.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis H37Ra] gi|215402328|ref|ZP_03414509.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis 02_1987] gi|215410099|ref|ZP_03418907.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis 94_M4241A] gi|215425797|ref|ZP_03423716.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T92] gi|215444672|ref|ZP_03431424.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T85] gi|218752200|ref|ZP_03530996.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis GM 1503] gi|219556398|ref|ZP_03535474.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T17] gi|224988952|ref|YP_002643639.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|253797494|ref|YP_003030495.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN 1435] gi|254230904|ref|ZP_04924231.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis C] gi|254363521|ref|ZP_04979567.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis str. Haarlem] gi|254549517|ref|ZP_05139964.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185436|ref|ZP_05762910.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis CPHL_A] gi|260199565|ref|ZP_05767056.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T46] gi|289441947|ref|ZP_06431691.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T46] gi|289446109|ref|ZP_06435853.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis CPHL_A] gi|289552814|ref|ZP_06442024.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN 605] gi|289568490|ref|ZP_06448717.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T17] gi|289744275|ref|ZP_06503653.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis 02_1987] gi|289749061|ref|ZP_06508439.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T92] gi|289756639|ref|ZP_06516017.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T85] gi|289760681|ref|ZP_06520059.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis GM 1503] gi|294996072|ref|ZP_06801763.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis 210] gi|297633052|ref|ZP_06950832.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN 4207] gi|297730029|ref|ZP_06959147.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN R506] gi|298524050|ref|ZP_07011459.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis 94_M4241A] gi|306774666|ref|ZP_07413003.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu001] gi|306779417|ref|ZP_07417754.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu002] gi|306783203|ref|ZP_07421525.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu003] gi|306787573|ref|ZP_07425895.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu004] gi|306792123|ref|ZP_07430425.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu005] gi|306796310|ref|ZP_07434612.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu006] gi|306802169|ref|ZP_07438837.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu008] gi|306806378|ref|ZP_07443046.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu007] gi|306966577|ref|ZP_07479238.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu009] gi|306970770|ref|ZP_07483431.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu010] gi|307078494|ref|ZP_07487664.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu011] gi|307083056|ref|ZP_07492169.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu012] gi|313657357|ref|ZP_07814237.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN V2475] gi|2114024|emb|CAB08957.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis H37Rv] gi|13880100|gb|AAK44811.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31617330|emb|CAD93439.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL PYROPHOSPHATE SYNTHETASE) [Mycobacterium bovis AF2122/97] gi|121492127|emb|CAL70592.1| Probable polyprenyl-diphosphate synthase grcC1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599963|gb|EAY58973.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis C] gi|134149035|gb|EBA41080.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis str. Haarlem] gi|148504483|gb|ABQ72292.1| putative polyprenyl-diphosphate synthase GrcC1 [Mycobacterium tuberculosis H37Ra] gi|148720290|gb|ABR04915.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis F11] gi|224772065|dbj|BAH24871.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|253318997|gb|ACT23600.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN 1435] gi|289414866|gb|EFD12106.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T46] gi|289419067|gb|EFD16268.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis CPHL_A] gi|289437446|gb|EFD19939.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN 605] gi|289542244|gb|EFD45892.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T17] gi|289684803|gb|EFD52291.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis 02_1987] gi|289689648|gb|EFD57077.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T92] gi|289708187|gb|EFD72203.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis GM 1503] gi|289712203|gb|EFD76215.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis T85] gi|298493844|gb|EFI29138.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis 94_M4241A] gi|308216772|gb|EFO76171.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu001] gi|308327631|gb|EFP16482.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu002] gi|308331986|gb|EFP20837.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu003] gi|308335773|gb|EFP24624.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu004] gi|308339379|gb|EFP28230.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu005] gi|308343255|gb|EFP32106.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu006] gi|308347147|gb|EFP35998.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu007] gi|308351062|gb|EFP39913.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu008] gi|308355721|gb|EFP44572.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu009] gi|308359676|gb|EFP48527.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu010] gi|308363581|gb|EFP52432.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu011] gi|308367217|gb|EFP56068.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis SUMu012] gi|323721036|gb|EGB30100.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis CDC1551A] gi|326902391|gb|EGE49324.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis W-148] gi|328457279|gb|AEB02702.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis KZN 4207] Length = 335 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 16/182 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A + + GA IE IH +L HDD+ MD +RRG P+ Sbjct: 55 GGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV--MDEAQVRRGAPSA 112 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + Q+ AI+AG+ LL A +++ + I +T GQM + Sbjct: 113 NAQWGNNVAILAGDYLLATASRLVARLGPEAVRIIADTFAQLVT----------GQMRET 162 Query: 168 Q--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + E +D + ++ + + KTG+L+ A G + + A+ + ERL G +G FQ+A Sbjct: 163 RGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIA 222 Query: 225 DD 226 DD Sbjct: 223 DD 224 >gi|311265743|ref|XP_003130800.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like isoform 1 [Sus scrofa] Length = 410 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + + A+ E IH SL+HDD+ +D+ RR Sbjct: 128 GKAFRPIIVVLMARACNIHHNNSRDMQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 185 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ LG Sbjct: 186 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 243 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 244 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIA 297 Query: 221 FQLADDLLD 229 FQL DD+LD Sbjct: 298 FQLIDDVLD 306 >gi|311265745|ref|XP_003130801.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like isoform 2 [Sus scrofa] Length = 421 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + + A+ E IH SL+HDD+ +D+ RR Sbjct: 139 GKAFRPIIVVLMARACNIHHNNSRDMQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 196 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ LG Sbjct: 197 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 254 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 255 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIA 308 Query: 221 FQLADDLLD 229 FQL DD+LD Sbjct: 309 FQLIDDVLD 317 >gi|325003710|ref|ZP_08124822.1| trans-hexaprenyltranstransferase [Pseudonocardia sp. P1] Length = 330 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 16/185 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A + + + A +E IH +L HDD+ MD +RRG + Sbjct: 48 GGKRFRPLFTLLAAQVGPHPERDGVITAAAVVELIHLATLYHDDV--MDEAAMRRGAESA 105 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++D AI+ G+ L +A +++ D +R +++ T ++ GQM + Sbjct: 106 NSRWDNSIAILTGDFLFAHASRLVADLG---PDAVR---IIAET----FAQLVTGQMRET 155 Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + V + KTG+L+ + G + + A E L FG+ +G FQ++ Sbjct: 156 RGPKPSDDPVEHYLRVVGEKTGSLIATSGRYGGMFSGAPTEHIEALHRFGDVIGTAFQIS 215 Query: 225 DDLLD 229 DD++D Sbjct: 216 DDIID 220 >gi|300779871|ref|ZP_07089727.1| possible trans-hexaprenyltranstransferase [Corynebacterium genitalium ATCC 33030] gi|300533981|gb|EFK55040.1| possible trans-hexaprenyltranstransferase [Corynebacterium genitalium ATCC 33030] Length = 386 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 11/225 (4%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 QE ++R+ LD + + + H+ A GGK+ R + + + Sbjct: 68 QELAERVAAGLDGVEKLMFERLSSGHDFLNEKVTHLAKAGGKRFRPMMAMLASEFGDQPQ 127 Query: 70 LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + GA I E +H +L HDD+ MD RRG + + ++ AI++G+ LL A Sbjct: 128 AENVVKGATIVEMVHLATLYHDDV--MDEAAKRRGVDSANARWTNTVAILSGDFLLAEAS 185 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 I+S T + +T ++ +G D + +++ + + KTG L Sbjct: 186 RIMSEIDTATVAHFADTFSDLVTGQ--MRETVGPGEGDPVEHYLN------VIREKTGVL 237 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + A GA + A + L+ GE +G+IFQ+ DD++D D Sbjct: 238 IASAAFLGATHSGAKDEDVRTLKELGEAVGMIFQIVDDVIDIFSD 282 >gi|315640276|ref|ZP_07895393.1| heptaprenyl diphosphate synthase [Enterococcus italicus DSM 15952] gi|315483938|gb|EFU74417.1| heptaprenyl diphosphate synthase [Enterococcus italicus DSM 15952] Length = 326 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 15/161 (9%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H +LIHDD+ +D +RRG ++ Q+ A+ AG+ L F+++++ + +K Sbjct: 78 EMLHTATLIHDDI--VDEAELRRGLSSIRSQFGNSVAVYAGDYLFVSCFKLMANYASSMK 135 Query: 140 DNIRSQLMLSLT-HNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACES 195 SL H+ ++ +L G++ + + F ID + ++ + KT L +C Sbjct: 136 ---------SLQMHSKSMESILNGELGQMDNRFNIDLSVADYLEAISGKTAELFALSCAI 186 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 GA + S+ E+ G +G+ FQ+ DD+LD +D K Sbjct: 187 GAYESGTSRKFAEQAGKIGLAIGMAFQIMDDILDYTQDQQK 227 >gi|50309433|ref|XP_454724.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643859|emb|CAG99811.1| KLLA0E17183p [Kluyveromyces lactis] Length = 477 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 44/197 (22%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN---GLLTYAFEI 130 R+ +E IH SL+HDD+ +D+ RRG+P+ +I + A++AG+ G T A Sbjct: 179 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNIAFTNKMAVLAGDFMLGRATVAISR 236 Query: 131 ISSPKT-----------------QLKDNI----------------RSQLMLSLT---HNI 154 + +P+ QLK+ LT + + Sbjct: 237 LRNPEVVELVSNSIANLVEGEFMQLKNTAIDADHTTFNNGTQHIPPPPTKFELTEHEYRV 296 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRC 212 G L D+ +D + + K +KT AL+ +C + A+++ E Sbjct: 297 PTSSTTNGTQLS-HDQLVDMAFDYYLHKTYLKTAALISKSCRAAAVLSGVRDPIIEECYE 355 Query: 213 FGENLGIIFQLADDLLD 229 FG+NLGI FQL DD+LD Sbjct: 356 FGKNLGICFQLVDDMLD 372 >gi|296113380|ref|YP_003627318.1| solanesyl diphosphate synthase [Moraxella catarrhalis RH4] gi|295921074|gb|ADG61425.1| solanesyl diphosphate synthase [Moraxella catarrhalis RH4] gi|326559225|gb|EGE09656.1| solanesyl diphosphate synthase [Moraxella catarrhalis 46P47B1] gi|326559864|gb|EGE10264.1| solanesyl diphosphate synthase [Moraxella catarrhalis 7169] gi|326569650|gb|EGE19702.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC1] gi|326570131|gb|EGE20176.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC8] gi|326570869|gb|EGE20893.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC7] gi|326575988|gb|EGE25911.1| solanesyl diphosphate synthase [Moraxella catarrhalis CO72] gi|326576400|gb|EGE26309.1| solanesyl diphosphate synthase [Moraxella catarrhalis O35E] Length = 348 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A L + A+++ A E +H +L+HDD+ +D +RRGKPT Sbjct: 65 GGKRMRPLITLLTARMLHDEQSQQAMQLAAITEMLHTATLVHDDV--IDASGLRRGKPTA 122 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + +D TA++ G+ L+ +F ++ + L L + G + G++L + Sbjct: 123 NATWDNPTAVLVGDYLIARSFNLLVG---------FNHLPLLKLFSDGTCDIAEGEVLQL 173 Query: 168 QDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 Q + E+ I KT L A + GA + + + L F + G FQ+ Sbjct: 174 QHQHNPKTLESDYLQIIDGKTSRLFMMATK-GAALLQGREEFLDDLGAFAYHFGNAFQMI 232 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 233 DDVLDFSGD 241 >gi|215413281|ref|ZP_03421970.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A] gi|298526862|ref|ZP_07014271.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A] gi|298496656|gb|EFI31950.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A] Length = 350 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 24/223 (10%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 + I+++ + L H+ + DR +A GK R+ LV A+ + A Sbjct: 37 RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ + L A I+ Sbjct: 93 PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLRDALHATAVRIL-- 148 Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 T L D IR M L IG +L GQ D+++ + KT Sbjct: 149 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 200 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 AL C GA++A+A L FG LG+ FQ DDL+ Sbjct: 201 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 243 >gi|320451263|ref|YP_004203359.1| octaprenyl-diphosphate synthase [Thermus scotoductus SA-01] gi|320151432|gb|ADW22810.1| octaprenyl-diphosphate synthase [Thermus scotoductus SA-01] Length = 314 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 18/217 (8%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74 R + L +L+ ++ H D L++A GGK+IR LV AS + Sbjct: 12 RFEEALSELIASDVLFVRLIHQD-LVTA------GGKRIRPRLVF-LASRAIGGAPFEME 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-S 133 + A+E +H +L+HDDL +D+ RRGK +Y ++++G+ LL+ +I+ + Sbjct: 64 LALAVELLHSATLLHDDL--IDDAETRRGKEAAFRRYGNAVSVLSGDFLLSRLLHVIAKT 121 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + +L + +Q+ +L+ LQ Q+ ++D ++ + I KT LM + Sbjct: 122 GRMELVERF-AQVAKTLSEGEVLQF----QVAALEDYSLENYE--RIITAKTAVLMELST 174 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 E A++ +E L FG G FQ+ DD LD Sbjct: 175 EGPALLKGVDGEVREALARFGLYYGQAFQMRDDYLDL 211 >gi|317509118|ref|ZP_07966745.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974] gi|316252589|gb|EFV12032.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974] Length = 338 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R L + + A A+E IH +L HDD+ MD +RRG P+ Sbjct: 54 GGKRFRPMFTVVAGQLGADERRGDVEIAASALELIHLATLYHDDV--MDEATMRRGVPSA 111 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ-MLD 166 ++Q+ AI+AG+ L A +I+ ++ +I +Q L LQ +LG Q D Sbjct: 112 NVQWGNQIAILAGDYLFARACGLIAKLGSE-ATSIVAQTFGELVTG-QLQEVLGAQGERD 169 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + ++ T +F KT +L+ + A + +++L GE +G+ FQ+ADD Sbjct: 170 KIEHYL--TVIFG----KTASLLGACGRLAGLAIRADRQVQDQLAVIGELVGMAFQIADD 223 Query: 227 LLD 229 ++D Sbjct: 224 IID 226 >gi|221195086|ref|ZP_03568142.1| bifunctional short chain isoprenyl diphosphate synthase [Atopobium rimae ATCC 49626] gi|221184989|gb|EEE17380.1| bifunctional short chain isoprenyl diphosphate synthase [Atopobium rimae ATCC 49626] Length = 365 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 14/202 (6%) Query: 36 NDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 N L +R ++ GGK++R LV + + AL V AIE +LIHDD+ Sbjct: 47 NTYLYQPLRGFSATGGKRVRPALVLLATQAVHGDVEAALPVACAIEDFQSAALIHDDI-- 104 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 D +RRG+P ++ + AI G+ L + I T + R +L+ +L I Sbjct: 105 ADKSELRRGEPCLYRRLGTGLAINVGDAALVHTIGRICHGNT-YDEATRLRLIDAL---I 160 Query: 155 GLQG-MLGGQMLDI---QDEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +Q L GQ LD+ Q+ D T +FM + GAI+ + ++ Sbjct: 161 SMQEHTLEGQALDLGWTQENRWDITPDEYLFMATSKTAYYSAAYPLLCGAIVGGGTAEQR 220 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 L+ FG G+ FQL DDLL+ Sbjct: 221 SALKAFGLKAGLAFQLQDDLLN 242 >gi|215429394|ref|ZP_03427313.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis EAS054] gi|289752601|ref|ZP_06511979.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis EAS054] gi|289693188|gb|EFD60617.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis EAS054] Length = 335 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 16/182 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A + + GA IE IH +L HDD+ MD +RRG P+ Sbjct: 55 GGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV--MDEAQVRRGAPSA 112 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + Q+ AI+AG+ LL A +++ + I +T GQM + Sbjct: 113 NAQWGNNVAILAGDYLLATASRLVARLGPEAVRIIADTFAQLVT----------GQMRET 162 Query: 168 Q--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + E +D + ++ + + KTG+L+ A G + + A+ + ERL G +G FQ+A Sbjct: 163 RGTSENVDSIKQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIA 222 Query: 225 DD 226 DD Sbjct: 223 DD 224 >gi|117164674|emb|CAJ88220.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces ambofaciens ATCC 23877] Length = 380 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 50/213 (23%) Query: 49 GGKKIRSFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R+ C A+ + + LRVGAA+E + +L+HDD+ MD RRG Sbjct: 65 GGKRLRTAFA--CCGWRAAGGSGDPAAVLRVGAALELLQACALVHDDV--MDGSLQRRGA 120 Query: 105 PTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 P +H++ + A++AG+ L +A D++ ++ L Sbjct: 121 PALHVELARGHWAAGMHGSAETFGTSAAVLAGDLALVWA------------DDLLTETAL 168 Query: 149 SLTHNIGLQG--------MLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFA--CES 195 H L M+ GQ LD+ + + V + +K+ AL A Sbjct: 169 GTPHGPRLHEEWRAMRTEMVAGQYLDLHAQAARSSGVDEALTVATLKS-ALYTVARPLAL 227 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A + E LR G G+ FQL DDLL Sbjct: 228 GASLAGADEGTVEALRMAGRCAGLAFQLRDDLL 260 >gi|165970696|gb|AAI58696.1| Unknown (protein for IMAGE:9025778) [Rattus norvegicus] Length = 407 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGA-------AIECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + + A E IH +L+HDD+ +D+ RR Sbjct: 125 GKAFRPIIVVLMARACNIHHNNSREMQARQRSVALVAEMIHTATLVHDDV--IDDASSRR 182 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++SL + ++ ++ G Sbjct: 183 GKHTVNKVWGEQKAVLAGDLILSAASIALA--------RIGNTAVVSLLAQV-IEDLVRG 233 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 234 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 293 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 294 AFQLIDDVLD 303 >gi|302308079|ref|NP_984864.2| AER004Wp [Ashbya gossypii ATCC 10895] gi|299789285|gb|AAS52688.2| AER004Wp [Ashbya gossypii ATCC 10895] Length = 475 Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 39/193 (20%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127 R+ +E IH SL+HDD+ +D+ RRGKP+ ++ + A++AG+ LL A Sbjct: 181 RLAEIVEMIHTASLLHDDV--IDHSGTRRGKPSGNVAFTNKMAVLAGDFLLGRATVSISR 238 Query: 128 ------FEIISSPKTQLKDNIRSQLMLSL------THNIGLQGMLGGQM---LDIQDEFI 172 E++S+ L + QL ++ T N G Q + L + D + Sbjct: 239 LRNPEVVELVSNCIANLVEGEFMQLKNTVVDGDLETINNGTQQIPPASKTIPLPVHDYRV 298 Query: 173 DET------QVFMIQK----------MKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 + T MI+ +KT AL+ +C + A+++ A + FG+N Sbjct: 299 NTTLASGISHEVMIETAFDYYLHKTYLKTAALISKSCRAAAVLSGARDPILDECYHFGKN 358 Query: 217 LGIIFQLADDLLD 229 LGI FQL DD+LD Sbjct: 359 LGICFQLVDDMLD 371 >gi|163781995|ref|ZP_02176994.1| octoprenyl-diphosphate synthase [Hydrogenivirga sp. 128-5-R1-1] gi|159882527|gb|EDP76032.1| octoprenyl-diphosphate synthase [Hydrogenivirga sp. 128-5-R1-1] Length = 308 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 15/183 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + AL +G +E IH SL+HDD+ +D RRG+ + + Sbjct: 33 GGKRLRPLITMLSCGMCGGEPEDALPLGVGLEYIHAASLLHDDV--VDGAKKRRGRESAN 90 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + A++ G+ + A + ++ T I S+ ++ + Q+L++ Sbjct: 91 LIFGNEVAVLTGDYMYAKALHLFATHGTIDMIRIVSRAVMDMAE---------AQVLELS 141 Query: 169 --DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E I E + F I KT A++ AC S +A +E+ RL G +G FQL DD Sbjct: 142 RVGELITEEEYFQIIDGKT-AVLFGACVSVGGLAGGC-DEEGRLYEVGLRMGRAFQLIDD 199 Query: 227 LLD 229 LLD Sbjct: 200 LLD 202 >gi|227500381|ref|ZP_03930443.1| possible trans-hexaprenyltranstransferase [Anaerococcus tetradius ATCC 35098] gi|227217444|gb|EEI82763.1| possible trans-hexaprenyltranstransferase [Anaerococcus tetradius ATCC 35098] Length = 330 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 29/227 (12%) Query: 17 DTILDDLLLQTASHMQT-----QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHL 70 + +++DL+++ ++ + + L I+ AL GK IR+ L+ C SL + Sbjct: 12 ENLIEDLVIEIHQEIKNILGDYKSSQNLYDIIKDALRSSGKMIRTKLLI-CISLMGEEEI 70 Query: 71 TALRVG--AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + AA+E H SLIHDD+ +D+ +RR + +Y + A+ AG+ ++ F Sbjct: 71 SDKIISQCAAVEITHLASLIHDDI--IDDSTLRRSHKSTQAKYGKDVAVFAGDYMIAKVF 128 Query: 129 EIISSPK-----TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQK 182 ++ + + D IR + N L +++ DE+ + Sbjct: 129 SYLAKKGYVEEISVIADTIRDMCNGEVGQN------LNKYKINVSTDEYFENIS------ 176 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT + C G+ + + E++ FG+NLG++FQL DDLLD Sbjct: 177 GKTASFFKTVCYFGSKNCGFDRKDTEKMVRFGQNLGLMFQLKDDLLD 223 >gi|302814167|ref|XP_002988768.1| hypothetical protein SELMODRAFT_13689 [Selaginella moellendorffii] gi|300143589|gb|EFJ10279.1| hypothetical protein SELMODRAFT_13689 [Selaginella moellendorffii] Length = 304 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 8/196 (4%) Query: 38 RLLSAIRY--ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +L AIRY A G+ + S + C L + AL + IE L DDLP M Sbjct: 54 QLHKAIRYCTADEEGRHLASLCIAAC-ELVGGDRHAALPMACTIEMWMAIILTTDDLPCM 112 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN R+G+ H+++D+ TAI+A L AF + D +L L ++ Sbjct: 113 DNARTRKGRAAAHVEFDDTTAILAAQALAALAFGTVVDSTLVSTDK---RLRLVKEFSLS 169 Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +Q ++ GQ D++ ET ++ KT + +GAI+ A + E E LR F Sbjct: 170 MQRLVYGQYDDVKKGESLETLEELNAKNTNKTSSFFELPLVAGAIVGGAGEEEIEGLRRF 229 Query: 214 GENLGIIFQLADDLLD 229 G G+++Q+ DDL D Sbjct: 230 GRYFGLMWQVNDDLSD 245 >gi|268317461|ref|YP_003291180.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252] gi|262334995|gb|ACY48792.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252] Length = 332 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 22/219 (10%) Query: 29 SHMQTQHNDRLLSAI-------RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 H Q D + +++ RY L GK+IR LV A L R A +E Sbjct: 26 KHFQRYFRDAMRTSVPLLDHVARYLLRQKGKRIRPLLVLLTAKLCGGITEATYRAAALVE 85 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H +L+HDD+ +D RRG +++ + A++ G+ F + D Sbjct: 86 LLHSATLVHDDV--VDGAEQRRGMFSINAIWKNKVAVLFGD------FLLSRG-LLLALD 136 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGA 197 + + +L+ + + M G++L I+ IDE F I KT +L+ +SGA Sbjct: 137 HRDYDTLHALSDAV--RRMSEGELLQIEKSRHLDIDEATYFRIISDKTASLIAACTKSGA 194 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + A + + GE LG+ FQ+ DDL D E+ K Sbjct: 195 LSATDDPRVIDEMYLMGEKLGLAFQIRDDLFDYGEEAGK 233 >gi|293342917|ref|XP_002725353.1| PREDICTED: rCG40823-like isoform 1 [Rattus norvegicus] gi|149028595|gb|EDL83936.1| rCG40823, isoform CRA_b [Rattus norvegicus] Length = 409 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGA-------AIECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + + A E IH +L+HDD+ +D+ RR Sbjct: 127 GKAFRPIIVVLMARACNIHHNNSREMQARQRSVALVAEMIHTATLVHDDV--IDDASSRR 184 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++SL + ++ ++ G Sbjct: 185 GKHTVNKVWGEQKAVLAGDLILSAASIALA--------RIGNTAVVSLLAQV-IEDLVRG 235 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 236 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 295 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 296 AFQLIDDVLD 305 >gi|194227087|ref|XP_001496103.2| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 1 [Equus caballus] Length = 379 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 19/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N +H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 97 GKAFRPIIVVLMARACNSHHDNSRDVQASQRSIALIAEMIHTASLVHDDV--IDDARSRR 154 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ LG Sbjct: 155 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 212 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 213 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 266 Query: 221 FQLADDLLD 229 FQL DD+LD Sbjct: 267 FQLIDDVLD 275 >gi|119094157|gb|ABL60987.1| geranylgeranyl pyrophosphate synthetase CrtE [uncultured marine bacterium HF10_19P19] Length = 338 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 17/186 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R + F V +L AA+E +H SL+HDD+ D +RRG P+V Sbjct: 55 GKQLRGRMALAAGDSFGVPRTASLPWAAAVEVLHNASLVHDDI--CDGDMVRRGAPSVWA 112 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSP----KTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 Y TA+ G+ L+ +FE+ + +T +I S+ M + T GQ L Sbjct: 113 FYGRDTALALGDWLIALSFELAAEAAYLGQTPQLVSILSRHMAATT---------AGQAL 163 Query: 166 DIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + + +M I KT L + E A +A ++ L F G +Q+A Sbjct: 164 EFEVRAYPDWSGYMDISTGKTAPLFIASVEGIAHLA-GRRDAIRPLNRFFSAAGGCYQIA 222 Query: 225 DDLLDC 230 +D+L+ Sbjct: 223 NDMLNV 228 >gi|83815330|ref|YP_445348.1| polyprenyl synthetase [Salinibacter ruber DSM 13855] gi|294507229|ref|YP_003571287.1| Octaprenyl-diphosphate synthase [Salinibacter ruber M8] gi|83756724|gb|ABC44837.1| polyprenyl synthetase [Salinibacter ruber DSM 13855] gi|294343557|emb|CBH24335.1| Octaprenyl-diphosphate synthase [Salinibacter ruber M8] Length = 355 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 23/188 (12%) Query: 50 GKKIRSFLVTECA-----SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GK+IR LV A + + H R A +E +H +L+HDD+ +D+ RRG Sbjct: 76 GKRIRPILVLLSAQACGGAATDQTH----RAAALVELLHTATLVHDDV--VDDAEERRGV 129 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 +++ + A++ G+ F + L + S L T + ++ M G++ Sbjct: 130 FSINALWKNKIAVLLGD------FLLSRGLLLSLDHDDYSVLH---TLSDAVRRMSEGEL 180 Query: 165 LDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 L I+ IDE F I KT +L+ +SGA+ + ER+ FGE LG+ F Sbjct: 181 LQIEKSRLLDIDEETYFRIISDKTASLISACTKSGAVSVTDDEALIERMDEFGETLGLAF 240 Query: 222 QLADDLLD 229 Q+ DDL D Sbjct: 241 QIRDDLFD 248 >gi|126666905|ref|ZP_01737881.1| putative polyprenyl diphosphate synthase [Marinobacter sp. ELB17] gi|126628621|gb|EAZ99242.1| putative polyprenyl diphosphate synthase [Marinobacter sp. ELB17] Length = 344 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 25/197 (12%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 G +R+ L F + A+ A E IH SL+HDDL +D +RRG+ TV Sbjct: 66 GSLLRARLALASCRSFECSQEYAVVAAACCELIHNASLVHDDL--LDGDQLRRGQATVWK 123 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 ++ A+ AG+ LL AF + + + + +Q + ++T + + GQ ++I Sbjct: 124 RHGRGVALCAGDLLLCTAFAVSAGLDDAQQSRLLTQYLAAMTGRV-----IVGQSIEIAP 178 Query: 170 ----------EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 +I+ Q KT L+ +GAI A A + + ++ F E +G+ Sbjct: 179 VEPGVQPRFRAYIEAAQA------KTVPLIQLPLMTGAIAAKAELSVLDSIKRFAEAVGL 232 Query: 220 IFQLADDLLDCEEDLPK 236 +Q+ DDL D E PK Sbjct: 233 AYQIIDDLDDLVE--PK 247 >gi|118475154|ref|YP_891862.1| polyprenyl synthetase [Campylobacter fetus subsp. fetus 82-40] gi|118414380|gb|ABK82800.1| polyprenyl synthetase [Campylobacter fetus subsp. fetus 82-40] Length = 294 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 40/228 (17%) Query: 14 KRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 +RID IL D L AS M +Q + GKK+RS L+ + A Sbjct: 2 ERIDDILKEFVDSLNYPLASEMFSQVS------------SGKKLRSKLILKIAGA----S 45 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + ++ + +E IH SL+HDD+ +D+ IRRGKP+++ + +I+ G+ L + F Sbjct: 46 EASFKLSSVVEIIHLASLLHDDV--IDDSLIRRGKPSINAIFGTKNSIMLGDILYSKGFN 103 Query: 130 IISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKT 185 I ++ D I + LS+ G+++D++ F D+ + + KT Sbjct: 104 EIVKFDMKIADIISDAVCKLSI-----------GELMDVELGSSFNADKEKYLKMIYFKT 152 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ A +S AI+A + ++ +G+NLG+ FQ+ DD+LD D Sbjct: 153 AVLIEAAAKSAAILAGFDE---QKYGDYGKNLGLAFQIVDDILDITSD 197 >gi|227833507|ref|YP_002835214.1| putative polyprenyl diphosphate synthase [Corynebacterium aurimucosum ATCC 700975] gi|262184496|ref|ZP_06043917.1| putative polyprenyl diphosphate synthase [Corynebacterium aurimucosum ATCC 700975] gi|227454523|gb|ACP33276.1| putative polyprenyl diphosphate synthase [Corynebacterium aurimucosum ATCC 700975] Length = 363 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 43/215 (20%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMDN 97 + L GGK+IR A L LR ++E I +LIHDD+ +D Sbjct: 48 FVLDGGKRIRPLYA--WAGFIGARGLEGTESPQAMLRAATSLEFIQACALIHDDI--VDA 103 Query: 98 GYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIIS----SPKTQ 137 RRG PTVH + + AI+ G+ L +A +++ SP+ Sbjct: 104 SDTRRGNPTVHRGVAARHRELGFHGDADFFGQSLAILVGDMALVWAEDMLQDSGLSPEAL 163 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMC-FAC 193 + + M + ++GGQMLDI + D T + + KT A Sbjct: 164 ARARAPWRAMR--------REVIGGQMLDICLEAEGSEDATLADSVNRFKTAAYTIERPL 215 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A + R +G+++G+ FQL DDLL Sbjct: 216 HLGAAIAGAPEKLVAAFRGYGQDIGVAFQLRDDLL 250 >gi|218755158|ref|ZP_03533954.1| polyprenyl synthetase [Mycobacterium tuberculosis GM 1503] gi|289763564|ref|ZP_06522942.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis GM 1503] gi|289711070|gb|EFD75086.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis GM 1503] Length = 350 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 24/223 (10%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 + I+++ + L H+ + DR +A GK R+ LV A+ + A Sbjct: 37 RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 V AA+E +H ++L+HDD+ MD RRG+ TV + AI+ G+ L A I+ Sbjct: 93 PVSAAVELVHNFTLLHDDV--MDGDATRRGRSTVWSVWGVGGAILLGDALHATAVRIL-- 148 Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 T L D IR M L IG +L GQ D+++ + KT Sbjct: 149 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 200 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 AL C GA++A+A L FG LG+ FQ DDL+ Sbjct: 201 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 243 >gi|145219780|ref|YP_001130489.1| dimethylallyltranstransferase [Prosthecochloris vibrioformis DSM 265] gi|145205944|gb|ABP36987.1| Dimethylallyltranstransferase [Chlorobium phaeovibrioides DSM 265] Length = 324 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 27/224 (12%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L Q + N + RY L GK+IR +V AS+ ++ R +E Sbjct: 16 LFRQKYRELLRNQNSLVDKVTRYVLRQQGKQIRPVMVLLSASVAGGIRESSYRGAIMVEL 75 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT----YAFEIISSPKTQ 137 +H +LIHDD+ +D +RRG +++ + +++ G+ LL+ Y+ E Sbjct: 76 LHSATLIHDDV--VDGAEMRRGIASINAIWKNKISVLIGDYLLSKGLLYSLES------- 126 Query: 138 LKDNIRSQLMLSLTHNI--GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 KD H + ++ M G++L IQ I E + KT +L+ + Sbjct: 127 -KD-------YGFLHIVSDAVRRMSEGEILQIQKTRSLDISEEDYIRVISDKTASLIASS 178 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 C GA A + + ++ +GE+LG+ FQ+ DD LD D K Sbjct: 179 CAMGAESATEDEVKIAAMKKYGESLGLAFQIRDDTLDYTGDSRK 222 >gi|318041258|ref|ZP_07973214.1| solanesyl diphosphate synthase [Synechococcus sp. CB0101] Length = 323 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 11/184 (5%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +V + + LTA R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLVSRALAADGELTARHRRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +++ A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFRYDTG 161 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +++++ KT +L+ + + +++ ++ + L FG LG+ FQ+ D Sbjct: 162 QSFETYLEKSYC------KTASLIANSARAAGVLSGLPAHQLDELYRFGRQLGLAFQVVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|254777013|ref|ZP_05218529.1| GrcC1 [Mycobacterium avium subsp. avium ATCC 25291] Length = 335 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 29/227 (12%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 + +++ RI+ ++D L++A + T+ L A GGK+ R A + Sbjct: 20 ATVRDGVGRIEQLMD-TELRSADDIMTELLTHLFKA------GGKRFRPLFTVLSAQIGP 72 Query: 67 VNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + + GA IE +H +L HDD+ MD +RRG PT ++++ AI+AG+ L Sbjct: 73 DPDAAEVTIAGAVIELVHLATLYHDDV--MDEAEVRRGTPTANVRWGNNVAILAGDYLFA 130 Query: 126 YAFEIIS--SPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM- 179 A ++S P+ QL +QL+ GQM + + E D + ++ Sbjct: 131 TASRLVSRLGPEAVQLIAETFAQLVT-------------GQMRETRGRKEGSDPIEHYLK 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + KT L+ A GA+ + A ++ ERL G +G FQ++DD Sbjct: 178 VVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDD 224 >gi|158301264|ref|XP_320978.4| AGAP002069-PA [Anopheles gambiae str. PEST] gi|157012386|gb|EAA01051.4| AGAP002069-PA [Anopheles gambiae str. PEST] Length = 249 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 14/153 (9%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D + RRGKP+V++ +++ AG+ Y ++S +L+ Sbjct: 4 EMIHTASLVHDDV--IDQSFARRGKPSVNVLWNQQQVAQAGD----YILAVVSMMLARLQ 57 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESG 196 N + ++ + L ++ G+++ + + + + F KT +L+ + ++ Sbjct: 58 HNDVTLILSEI-----LADLVQGELMQLDTKETENERFAHYFARSYRKTASLIANSLKAV 112 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ + E +G NLG+ FQL DDLLD Sbjct: 113 AVLTGVGERTAEISFQYGRNLGLAFQLVDDLLD 145 >gi|313240927|emb|CBY33211.1| unnamed protein product [Oikopleura dioica] Length = 344 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 18/188 (9%) Query: 49 GGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GK IR +V A + +V E IH SL+HDD+ +D RRGK Sbjct: 61 SGKSIRPLIVGRIAEALGGCIETNEKLQKVAMIAEMIHTGSLVHDDV--IDKSEERRGKA 118 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + + ++ A++AGN +++Y+ ++++S ++ I S++ ++ ++ G++ Sbjct: 119 SANSKWGVTKAVMAGNYIISYSSQLLASLESDEVTKIISRI---------IEDLIYGELC 169 Query: 166 DIQDEFIDETQVF--MIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 ++ + + I+K +KT +L+ + E+ A++ + ++ FG+ LGI F Sbjct: 170 QLESVNSNHEHRYKQYIKKTYLKTASLIANSAEAVAVLTDQPAHVQQAAFNFGKYLGIAF 229 Query: 222 QLADDLLD 229 Q+ DD LD Sbjct: 230 QIQDDRLD 237 >gi|226361079|ref|YP_002778857.1| polyprenyl diphosphate synthase [Rhodococcus opacus B4] gi|226239564|dbj|BAH49912.1| putative polyprenyl diphosphate synthase [Rhodococcus opacus B4] Length = 351 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 18/188 (9%) Query: 41 SAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +A+ A GGK+ R A L + + + +E +H +L HDD+ MD Sbjct: 63 AALHLAKAGGKRFRPLFTVLTAQLGPKASDPSVVTAATVVELVHLATLYHDDV--MDEAS 120 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQ--LKDNIRSQLMLSLTHNIG 155 +RRG P+ + ++ AI+AG+ L +A ++S+ P+ + + + + IG Sbjct: 121 MRRGAPSANARWGNSVAILAGDYLFAHASRLVSTLGPEAVRIIAETFAELVTGQMRETIG 180 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 L+G QD + KTG+L+ + G + A + +RL G+ Sbjct: 181 LRGE--------QDPV---EHYLKVVWEKTGSLIAASGRFGGTFSGADADHVKRLERLGD 229 Query: 216 NLGIIFQL 223 +G FQ+ Sbjct: 230 AVGTAFQI 237 >gi|293342919|ref|XP_002725354.1| PREDICTED: rCG40823-like isoform 2 [Rattus norvegicus] Length = 422 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 21/190 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGA-------AIECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + + A E IH +L+HDD+ +D+ RR Sbjct: 140 GKAFRPIIVVLMARACNIHHNNSREMQARQRSVALVAEMIHTATLVHDDV--IDDASSRR 197 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ I + ++SL + ++ ++ G Sbjct: 198 GKHTVNKVWGEQKAVLAGDLILSAASIALA--------RIGNTAVVSLLAQV-IEDLVRG 248 Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + L + E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 249 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 308 Query: 220 IFQLADDLLD 229 FQL DD+LD Sbjct: 309 AFQLIDDVLD 318 >gi|313231697|emb|CBY08810.1| unnamed protein product [Oikopleura dioica] Length = 344 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 18/188 (9%) Query: 49 GGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GK IR +V A + +V E IH SL+HDD+ +D RRGK Sbjct: 61 SGKSIRPLIVGRIAEALGGCIETNEKLQKVAMIAEMIHTGSLVHDDV--IDKSEERRGKA 118 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + + ++ A++AGN +++Y+ ++++S ++ I S++ ++ ++ G++ Sbjct: 119 SANSKWGVTKAVMAGNYIISYSSQLLASLESDEVTKIISRI---------IEDLIYGELC 169 Query: 166 DIQDEFIDETQVF--MIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 ++ + + I+K +KT +L+ + E+ A++ + ++ FG+ LGI F Sbjct: 170 QLESVNSNHEHRYKQYIKKTYLKTASLIANSAEAVAVLTDQPAHVQQAAFNFGKYLGIAF 229 Query: 222 QLADDLLD 229 Q+ DD LD Sbjct: 230 QIQDDRLD 237 >gi|193084129|gb|ACF09795.1| octaprenyl-diphosphate synthase [uncultured marine group III euryarchaeote SAT1000-53-B3] Length = 325 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 106/232 (45%), Gaps = 25/232 (10%) Query: 7 SKLQEN---SKRIDTILDDLLLQTASHMQ---TQHNDRLLSAIRYALLGGKKIRSFLVTE 60 ++L+EN S+ ++ ++ + HM+ ++ + L I + GK++R L Sbjct: 5 TRLKENLIISENLNDYYKEVRAEFQRHMKREISKESKDLAPLIEKGVGDGKQLRPVLCRL 64 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + + A G A+E IHC +LIHDD +D RR P + + TA++ Sbjct: 65 VSDSLGGDAHLAFECGMALELIHCGTLIHDDW--LDGDKFRREAPALWKELGPRTAVLVA 122 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQMLDIQDEFIDETQVF 178 + ++ ++ + L+ ++ + + G + D D+ V+ Sbjct: 123 DLMIATG-------------SLHGAISLATGKSLARCARNLTEGAIADFTDKENYSESVY 169 Query: 179 MIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + K KTGAL A E GA+++ + + + FGE +GII+Q+ DD LD Sbjct: 170 LHRIKKKTGALYSTAAELGALISPRT-DLALPMHKFGETVGIIYQITDDYLD 220 >gi|13383251|dbj|BAB39476.1| putative GGPP synthase 1 [Youngia japonica] Length = 126 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRGKPT HI Y E A++AG+ LL+++FE +++ + + + + L IG Sbjct: 1 NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHLATATKGVSSDRILRAIGELAKCIGS 60 Query: 157 QGMLGGQMLDIQDEFIDETQV-FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFG 214 +G++ GQ++DI F + + AL+ + GAIM S E E+LR F Sbjct: 61 EGLVAGQVVDICSRRRRCRIRPFGVYPFTQDAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120 Query: 215 ENLGII 220 ++G++ Sbjct: 121 RSIGLL 126 >gi|256394108|ref|YP_003115672.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928] gi|256360334|gb|ACU73831.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928] Length = 346 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 11/182 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR L A + A+ V A+E +H +SL+HDD+ MD RR +PT Sbjct: 62 GKAIRPALTLLTARAVGGSAEAAVPVAVAVELVHNFSLLHDDV--MDADLTRRHRPTAWS 119 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + AI+AG+ LL A +++ + D + + GQ D+ Sbjct: 120 VFGISQAILAGDALLAVANRLLAQEPAPVCDRGAEWIGTCCVE------LCAGQWSDMDF 173 Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 Q + ++V + KTGAL+ AC GA+ + RL FG LG+ FQ DD Sbjct: 174 EQRADVSVSEVLAMAAGKTGALLGCACALGALAGGGTPAAAGRLDAFGRKLGLAFQYVDD 233 Query: 227 LL 228 LL Sbjct: 234 LL 235 >gi|294631343|ref|ZP_06709903.1| polyprenyl synthetase [Streptomyces sp. e14] gi|292834676|gb|EFF93025.1| polyprenyl synthetase [Streptomyces sp. e14] Length = 383 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 13/154 (8%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H ++L+HDD+ MD RR +PTV + + AI+AG+ L A +++ Sbjct: 129 ELVHNFTLLHDDV--MDRDTTRRHRPTVWTVFGDADAILAGDALQALALRLLAEDPHPAA 186 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACE 194 ++L + + GQ D E T+V + + + KTGAL+ AC Sbjct: 187 PAAAARLAACVVE------LCAGQHADTALESRAPTEVTLAEVLAMAEAKTGALLGCACA 240 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 G + A A++ E L FG G+ FQL DD++ Sbjct: 241 VGGLYAGAAEEEVRALDAFGRQAGLAFQLIDDVI 274 >gi|154148638|ref|YP_001406457.1| bifunctional short chain isoprenyl diphosphate synthase [Campylobacter hominis ATCC BAA-381] gi|153804647|gb|ABS51654.1| bifunctional short chain isoprenyl diphosphate synthase [Campylobacter hominis ATCC BAA-381] Length = 297 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 20/169 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 +L++ A +E IH SL+HDD+ +D IRRG P+++ + A++ G+ + AF + Sbjct: 48 SLKLCAIVELIHAASLLHDDV--IDESDIRRGNPSINAVFGSKNAVMLGDIFYSKAFFEL 105 Query: 132 SSPKTQLKDNIRSQLM-LSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ-KMKTGA 187 S + I + + LS+ G+++D++ + F + ++ KT Sbjct: 106 CSFNDFISKTISNAVFKLSI-----------GELMDVKMSENFNKNRENYLTMIYYKTAG 154 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ + GA +A++ + E+ +G+NLG+ FQ+ DD+LD +D K Sbjct: 155 LIESVAKIGAFLANS---DCEKFAEYGKNLGLAFQIIDDILDITQDSKK 200 >gi|62391012|ref|YP_226414.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] gi|41326351|emb|CAF20513.1| PUTATIVE GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Corynebacterium glutamicum ATCC 13032] Length = 366 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 40/214 (18%) Query: 45 YALLGGKKIRS------FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 + L GGK+IR FL + + + L A++E I +LIHDD+ +D+ Sbjct: 50 FVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALIHDDI--IDSS 107 Query: 99 YIRRGKPTVH--IQYDE--------------VTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 RRG PTVH ++ D +I+AG+ L +A ++ L+D+ Sbjct: 108 DTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDM-------LQDSG 160 Query: 143 RSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFM---IQKMKTGAL-MCFACE 194 S L+ T + +GM +GGQ+LDI E V + + + KT A + Sbjct: 161 LSAEALARTRD-AWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLH 219 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A S + L +G ++GI FQL DDLL Sbjct: 220 LGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLL 253 >gi|118463064|ref|YP_883710.1| polyprenyl synthetase [Mycobacterium avium 104] gi|118164351|gb|ABK65248.1| polyprenyl synthetase [Mycobacterium avium 104] Length = 325 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 29/227 (12%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 + +++ RI+ ++D L++A + T+ L A GGK+ R A + Sbjct: 10 ATVRDGVGRIEQLMD-TELRSADDIMTELLTHLFKA------GGKRFRPLFTVLSAQIGP 62 Query: 67 VNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + + GA IE +H +L HDD+ MD +RRG PT ++++ AI+AG+ L Sbjct: 63 DPDAAEVTIAGAVIELVHLATLYHDDV--MDEAEVRRGTPTANVRWGNNVAILAGDYLFA 120 Query: 126 YAFEIIS--SPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM- 179 A ++S P+ QL +QL+ GQM + + E D + ++ Sbjct: 121 TASRLVSRLGPEAVQLIAETFAQLVT-------------GQMRETRGRKEGSDPIEHYLK 167 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + KT L+ A GA+ + A ++ ERL G +G FQ++DD Sbjct: 168 VVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDD 214 >gi|332294868|ref|YP_004436791.1| Trans-hexaprenyltranstransferase [Thermodesulfobium narugense DSM 14796] gi|332177971|gb|AEE13660.1| Trans-hexaprenyltranstransferase [Thermodesulfobium narugense DSM 14796] Length = 314 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 16/190 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV A N + ++ A +E IH +LIHDD+ +D +RRG +V+ Sbjct: 43 GGKRIRPTLVFLSALCVNQDIEKVIKYAAVVEGIHLATLIHDDV--IDESNVRRGILSVN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +Y AI++G+ +L +S + + + +++++ + G+++ + Sbjct: 101 GKYGFKVAILSGDFILAKITHFLSLLENKEPVRLMAEVIMRMAE---------GEVMQQE 151 Query: 169 DEF-IDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D F I + ++I+ KT L+ + G+I +N FG NLGI FQ+ DD Sbjct: 152 DLFKIVSIERYIIRCTNKTARLISSSAFLGSIDVLDKRN---IFAEFGLNLGIAFQIIDD 208 Query: 227 LLDCEEDLPK 236 +LD ++ K Sbjct: 209 ILDFTGEVKK 218 >gi|323359581|ref|YP_004225977.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum StLB037] gi|323275952|dbj|BAJ76097.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum StLB037] Length = 355 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 36/224 (16%) Query: 34 QHND---RLLSAIRYALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSL 87 QH D L SAIR A GGK+ R LV + + +V AA E +H + Sbjct: 31 QHGDGARALASAIRRAAEGGKRFRPLLVVSAFDTLDGPDIARPALYQVAAAFELLHTAFV 90 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDE-----------------VTAIIAGNGLLTYAFEI 130 +HDD+ +D+ RRG P V ++ I+AG+ LL A + Sbjct: 91 VHDDV--IDHDVERRGMPNVGGEFRSRGTERGADAAGAALLGDAAGILAGDLLLHEAARL 148 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTG 186 ++ ++ ++R +L+L + + + G++ D+++ ID + KT Sbjct: 149 VA--MAEIPTDLRRELLLLVEDAVLVSA--AGELADVENAVSAGDIDADTILRTTHDKT- 203 Query: 187 ALMCFAC--ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A+ F+ E+GA++A A + L+ FG+ LG+ +QL DDL+ Sbjct: 204 AVYSFSAPLEAGAVLAGAEAPVRHALQRFGQRLGLAYQLVDDLI 247 >gi|302560949|ref|ZP_07313291.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000] gi|302478567|gb|EFL41660.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000] Length = 354 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 17/188 (9%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 A GGK++R LV A + + E +H SL HDD+ +D +R G Sbjct: 71 AATGGKRMRPLLVLLAAEFGDPGSEGVAQAAVVAELVHLASLYHDDV--VDRAAVRHGAA 128 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML-SLTHNIGLQGMLGGQM 164 + + + A GN LL + + D + L L + T N ++ GQ+ Sbjct: 129 SANALWGNRAAAQGGNWLLARGARLSA-------DLVPDALALNARTANR----IVEGQL 177 Query: 165 LDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 L++ V F + KT AL+ + GA A A + + L +GE LG+ F Sbjct: 178 LELVGPEPGADPVAHYFRVAAGKTAALLAMSLGVGAFQAGAPRAAADALVEYGEQLGLAF 237 Query: 222 QLADDLLD 229 Q+ADDLLD Sbjct: 238 QIADDLLD 245 >gi|148239374|ref|YP_001224761.1| prenyl transferase [Synechococcus sp. WH 7803] gi|147847913|emb|CAK23464.1| Prenyl transferase [Synechococcus sp. WH 7803] Length = 323 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R LV+ S R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLVSRALSPEGELSPRHRRLAEITEMIHTASLVHDDV--VDEAGTRRGVE 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +++ A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLFRYDTG 161 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +++++ KT +L+ + + +++ ++ + E L +G LG+ FQ+ D Sbjct: 162 QTFETYLEKSYC------KTASLVANSARAAGVLSGCTEPQLESLYHYGRQLGLAFQVVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|332637102|ref|ZP_08415965.1| trans-hexaprenyltranstransferase, component II [Weissella cibaria KACC 11862] Length = 329 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 13/188 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R F L + A +E +H SL+HDD+ +D+ RR +V Sbjct: 51 GGKLLRPAFTILIGRFFPAEREPLLNLAATVEMLHTASLVHDDI--IDDSPKRRHAESVQ 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ + A G+ L F L DN ++ + L+ +L G++ Sbjct: 109 SRFGKDVAAYTGDYLFAVTFRT-------LADNTNDINVVRMATRY-LERILSGELTQRT 160 Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + + + + + KT AL A G +HA ++ + F N+G+ FQ+ D Sbjct: 161 NHYKRDMTIANYEDQIAGKTAALFVLAANLGIAASHAPKDFADLATDFAYNVGMAFQILD 220 Query: 226 DLLDCEED 233 DLLD D Sbjct: 221 DLLDYSAD 228 >gi|217077572|ref|YP_002335290.1| geranylgeranyl diphosphate synthase [Thermosipho africanus TCF52B] gi|217037427|gb|ACJ75949.1| geranylgeranyl diphosphate synthase [Thermosipho africanus TCF52B] Length = 338 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 37/239 (15%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---NVNHL 70 K+++ ++ ++L+ + Q + + I Y L GK+IR L A+ + +++ Sbjct: 12 KKVEEYIEKVILENKVNPPKQIESLIRTLIEYCLRPGKRIRPLLFLLGATSYAKKELDYE 71 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ-YDEVT------------AI 117 R+ A IE +HC+ LIHDD+ MD +RRG P++H+ Y+E A+ Sbjct: 72 KLYRIAAVIEIMHCFLLIHDDI--MDRSALRRGLPSLHVVFYEEFKEKNNNEKIGEDLAL 129 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH---NIGLQGMLGGQMLDIQDEF--- 171 + G+ L A +S K N+ S+ + ++ N G GQ LD+ Sbjct: 130 VFGDILFFIAIRQLS------KLNLSSKFLEEFSNCYINTGY-----GQTLDVLYSLGKY 178 Query: 172 -IDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE ++ + I ++KT F ++ +K+++ GI FQ+ DD++ Sbjct: 179 KPDEDKISVEIARLKTAYYTFFYPFYLGVLLSNENIDKKKIEDAIIPAGIAFQIRDDII 237 >gi|297563839|ref|YP_003682812.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848288|gb|ADH70306.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 768 Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 25/208 (12%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ +R+ G G+ RS++ LF V+ + AA E +H SLI DD+ D Sbjct: 451 LVGPVRHTTAGLGRSWRSYVSMAAIELFGVDSEPYRPLVAAAELLHTGSLIVDDVE--DR 508 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+P H+ + E A+ AG F + L D+ +L + + L+ Sbjct: 509 SPLRRGRPAAHVVFGEAVAVNAGTAAY---FALDRVLNRVLPDDAALRLRVYQVYLRVLR 565 Query: 158 GMLGGQMLDI------QDEFIDETQVFMIQK-------MKTGALMCFACESGAIMAHASQ 204 GGQ +DI DE ++ + + +KT A + E GA++A A + Sbjct: 566 AGHGGQAIDIAGHRAAMDEAVETGDAEALLRRVRSGHWLKTAAPVRGLAEIGALVAGARE 625 Query: 205 NEKERLRCFGE---NLGIIFQLADDLLD 229 E+ R GE +G+ +Q++DD++D Sbjct: 626 ---EQFRALGEYFDAVGLAYQISDDVMD 650 >gi|300711739|ref|YP_003737553.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3] gi|299125422|gb|ADJ15761.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3] Length = 354 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 23/207 (11%) Query: 38 RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 R LS + LL GGK+ R+ + F + L E +H ++I DD+ Sbjct: 47 RALSDPIWDLLDRGGKRWRAVVCLLLLDGFGADPRAYLPYACIPEVLHNGTIIVDDV--E 104 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS------PKTQLKDNIRSQLMLS 149 D IRRG+P +H ++ A+ AGN + ++I P+TQL L+ Sbjct: 105 DGAEIRRGEPALHHRFGPDIALNAGNAMYFLPLKVIGKNPADLDPETQLATYEMLMDELN 164 Query: 150 LTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 TH GQ +DI +D + E + + KTG L AI+ Sbjct: 165 RTHL--------GQGMDIYWHRNRDATVAEAEYLEMCACKTGCLGRIVARLAAIITDQPP 216 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231 + + + E++ I FQ+ DD+LD E Sbjct: 217 EVEREVAAYAEDMSIAFQIGDDILDVE 243 >gi|23308904|ref|NP_601376.2| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] gi|21324942|dbj|BAB99565.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] Length = 371 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 40/214 (18%) Query: 45 YALLGGKKIRS------FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 + L GGK+IR FL + + + L A++E I +LIHDD+ +D+ Sbjct: 55 FVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALIHDDI--IDSS 112 Query: 99 YIRRGKPTVH--IQYDE--------------VTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 RRG PTVH ++ D +I+AG+ L +A ++ L+D+ Sbjct: 113 DTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDM-------LQDSG 165 Query: 143 RSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFM---IQKMKTGAL-MCFACE 194 S L+ T + +GM +GGQ+LDI E V + + + KT A + Sbjct: 166 LSAEALARTRD-AWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLH 224 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A S + L +G ++GI FQL DDLL Sbjct: 225 LGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLL 258 >gi|86739265|ref|YP_479665.1| polyprenyl synthetase [Frankia sp. CcI3] gi|86566127|gb|ABD09936.1| Polyprenyl synthetase [Frankia sp. CcI3] Length = 338 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 24/220 (10%) Query: 20 LDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76 ++DLL +++ S T+ + L+ A GGK+ R +V A + + + Sbjct: 28 VEDLLRESVRSESAFVTETSRHLVDA------GGKRFRPIVVLLAAQFADPEAVGVVPAA 81 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H +L HDD+ MD RRG + + ++ AI+ G+ L A +I + Sbjct: 82 VAIELTHLSTLYHDDV--MDEAPRRRGAASANTRWTNTVAILTGDYLFARASDITA---- 135 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFAC 193 ++ + L I + GQ+ + + V + KT +L+ + Sbjct: 136 ----DLGPEATRILARTIAT--LCEGQIRETVGPAPGQDPVEHYLRVITDKTASLIATSG 189 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GA++A A + L FGE G+ FQL+DD++D D Sbjct: 190 RLGAMLAGADPITVDTLATFGELFGVAFQLSDDIIDVASD 229 >gi|239978074|ref|ZP_04700598.1| polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 390 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 22/152 (14%) Query: 44 RYALLGGKKIRS----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 R+ LGG+++R + + CA ALRVGAA+E + +L+HDD+ MD+ Sbjct: 77 RFTSLGGRRLRPALLWWALRACALPDGDRARAALRVGAAVELLQTCALVHDDV--MDSSR 134 Query: 100 IRRGKPTVHI----QYDE--------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +RRG+P +H+ QY A++AG+ L +A + ++ +T+L D +R ++ Sbjct: 135 LRRGRPALHVSLADQYGAAGTDLFAGAAAVLAGDLALAWAEDTLA--ETELPDPVRRRVR 192 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G M+ GQ LD+ + + + Sbjct: 193 AVWRVMRGE--MVAGQYLDLHGQVTADRSALL 222 >gi|297153619|gb|ADI03331.1| hypothetical protein SBI_00210 [Streptomyces bingchenggensis BCW-1] Length = 466 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 14/147 (9%) Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +D+ +RRG+ T + +Y + A++ G+ LL + +S + + M+S+ Sbjct: 2 IDDAQVRRGRSTTNAKYGDAIALLTGDYLLARCMQAAAS--------LGASPMMSMAET- 52 Query: 155 GLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 L + GQML+ + D E KT LM A GA+ +AS + ++ L Sbjct: 53 -LIDVCVGQMLESSQLFDPLRTEEDYLTAVSGKTARLMRTATTMGALQCNASNDVQDALE 111 Query: 212 CFGENLGIIFQLADDLLD-CEEDLPKK 237 FG NLG+ FQ+ DD+LD C E+ K+ Sbjct: 112 SFGHNLGMAFQIWDDILDICSEETGKQ 138 >gi|242052439|ref|XP_002455365.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor] gi|241927340|gb|EES00485.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor] Length = 364 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 6/197 (3%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L ++RY++L GGK++R L L A+ V A+E +H SLIHDD+P MD+ Sbjct: 98 LRESMRYSVLAGGKRLRPALAIAACELVGGPAAAAVPVACAVEMMHTASLIHDDMPCMDD 157 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIG 155 +RRG+P+ H+ + E TA+++G+ LL AFE + +S + + + +L L G Sbjct: 158 DPLRRGRPSNHVAFGEPTALLSGDALLALAFEHVARASAGAGVPADRALRAVLELGSAAG 217 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRC 212 + G+ GQ+ D+ + + ++ + KT L+ A SGA++ E ER+R Sbjct: 218 VGGIAAGQVADMASQGASSGSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRR 277 Query: 213 FGENLGIIFQLADDLLD 229 + LG++ Q+ DD+LD Sbjct: 278 YAHFLGLLLQVVDDVLD 294 >gi|239928074|ref|ZP_04685027.1| putative polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC 14672] Length = 341 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 19/186 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + + E +H SL HDD+ +D+ IR G + + Sbjct: 61 GGKRLRPLLVLLGAEFGDPEGEGVVDAAVLAELVHVSSLYHDDV--IDDAGIRHGADSAN 118 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ A+ AG+ LL A ++ + P+ + + + ++ GQ L+ Sbjct: 119 ARWGNRRAVFAGDWLLAQAAQLSCALGPRAVRLNAVTADRLVR------------GQALE 166 Query: 167 IQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + + + K+ +L+ + + GA+ A A + + L +GE LG+ FQ+ Sbjct: 167 LLGPGPGTAPLDHYLRVTAGKSASLIVLSLQLGALQAGAPEAYADVLAEYGEQLGLAFQM 226 Query: 224 ADDLLD 229 +DD+LD Sbjct: 227 SDDILD 232 >gi|255325357|ref|ZP_05366463.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141] gi|255297922|gb|EET77233.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141] Length = 359 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 37/211 (17%) Query: 45 YALLGGKKIRSFLVTE---CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 + L GGK++R A + + LR A++E I +LIHDD+ +D R Sbjct: 46 FVLDGGKRVRPTYAWAGYLAAGRGEEDPVAMLRAAASLEFIQACALIHDDI--IDASNTR 103 Query: 102 RGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 RG PTVH +++ AI+ G+ L YA ++ +D+ S Sbjct: 104 RGNPTVHRGVEKLHRESEYLGDPEFFGTSVAILVGDLALVYAEDM-------FQDSGLSA 156 Query: 146 LMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GA 197 L + +GM +GGQ+LDI E V + + + E GA Sbjct: 157 AALHRARSP-WRGMRTEVIGGQLLDISLEAAGSESVELANSVNRYKTAAYTIERPLHLGA 215 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A AS+ R +G ++GI +QL DD L Sbjct: 216 ATAGASEELIAAFRGYGHDIGIAYQLRDDQL 246 >gi|332708306|ref|ZP_08428286.1| solanesyl diphosphate synthase [Lyngbya majuscula 3L] gi|332352910|gb|EGJ32470.1| solanesyl diphosphate synthase [Lyngbya majuscula 3L] Length = 323 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 19/188 (10%) Query: 49 GGKKIRS--FLVTECASLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK++R L+ A++ N + +T R+ E IH SL+HDD+ +D +RR Sbjct: 44 GGKRLRPAIVLLVSRATITN-SKITPRHRRLAEITEMIHTASLVHDDV--IDESDVRRTV 100 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 PTV+ ++ A++AG+ L + +++ DN+ +LS ++ M G++ Sbjct: 101 PTVNSLFNNRIAVLAGDFLFGQSAWYLAN-----LDNLEVVKLLSEV----IKDMAEGEI 151 Query: 165 LDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 F T + ++ + KT +LM + ++ ++ S E L +G NLG+ F Sbjct: 152 QQGLSRFDTTTTIEGYLAKTYNKTASLMANSAKAAGCLSGVSDQVAENLYHYGRNLGLAF 211 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 212 QIVDDILD 219 >gi|209879225|ref|XP_002141053.1| hexaprenyl pyrophosphate synthetase [Cryptosporidium muris RN66] gi|209556659|gb|EEA06704.1| hexaprenyl pyrophosphate synthetase, putative [Cryptosporidium muris RN66] Length = 505 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 49/190 (25%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SL+HDD+ +D IRRGK + H+++ AI+ G+ L + A ++ Sbjct: 213 ALEMIHIASLLHDDI--VDESDIRRGKTSTHLKFGNKIAILTGDFLFSRACHSVA----- 265 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE---------------TQVFMI 180 +NI + +SL ++G++ G++L D EF+DE TQ+ + Sbjct: 266 FLENINAMKHVSLI----VEGLVRGELLQYNDLREFLDEIKENLDEMKNQNSTTTQIDIF 321 Query: 181 QKMKTGALMCFACESGAIMAHA------------SQN---------EKERLRCFGENLGI 219 K L ++ ++M+H S N +K+ + G N GI Sbjct: 322 NKYMKNYLSKIYYKTASLMSHGVSACVEVNGMQQSSNLIGNELFNIKKKTIFNIGLNFGI 381 Query: 220 IFQLADDLLD 229 FQL DDLLD Sbjct: 382 AFQLLDDLLD 391 >gi|297158616|gb|ADI08328.1| putative polyprenyl diphosphate synthase [Streptomyces bingchenggensis BCW-1] Length = 379 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 26/197 (13%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A TA+ A+E IH +SL+HDD+ MD RR + +V Sbjct: 83 GKGVRQALAVLGAEAAGAPGTTAVAGAVAVELIHAFSLLHDDI--MDGDETRRRRASVWK 140 Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLG----GQM 164 Y A++AG+ L A + ++ SP IR L G LG GQ Sbjct: 141 AYGTGPAVLAGDALFALAVQTLAESPGPHGGAAIRQ-----------LSGALGDLVRGQA 189 Query: 165 LDI--------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 D+ + + + + + KTGAL+ A GA +A A + L G + Sbjct: 190 EDLLFESRPWTGPDAVRTAEYRAMAEGKTGALLGCAAALGAQLAGAPEPVVAALDRAGRH 249 Query: 217 LGIIFQLADDLLDCEED 233 +G+ FQ DDLL D Sbjct: 250 VGVAFQAVDDLLGIWGD 266 >gi|312881852|ref|ZP_07741623.1| hypothetical protein VIBC2010_06329 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370498|gb|EFP97979.1| hypothetical protein VIBC2010_06329 [Vibrio caribbenthicus ATCC BAA-2122] Length = 297 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 10/181 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GG K R+ L + A FN +H TAL + ++E +H SLIHDD+ D RR + + Sbjct: 49 GGSKRRALLCYDTARSFNHSHQTALLLACSVELLHNASLIHDDI--QDQDMTRRDQAALW 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ AI G+ L+ A+ + QL I ++ ++ L ++ + + GQM DI Sbjct: 107 VKSSVAEAICVGDSLIAAAYMALG----QLA--IFNEKLIPLV-SLRVMQTIKGQMSDIG 159 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + K K L+ + E +++A++S E+L E I +Q DD+ Sbjct: 160 QGQFSRSSYTDVAKEKAAPLLRLSVELPSLLANSSII-GEKLAEAAELFAIAYQFNDDIS 218 Query: 229 D 229 D Sbjct: 219 D 219 >gi|291436410|ref|ZP_06575800.1| trans-hexaprenyltranstransferase [Streptomyces ghanaensis ATCC 14672] gi|291339305|gb|EFE66261.1| trans-hexaprenyltranstransferase [Streptomyces ghanaensis ATCC 14672] Length = 338 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 19/186 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + + E +H SL HDD+ +D+ IR G + + Sbjct: 58 GGKRLRPLLVLLGAEFGDPEGEGVVDAAVLAELVHVSSLYHDDV--IDDAGIRHGADSAN 115 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 ++ A+ AG+ LL A ++ + P+ + + + ++ GQ L+ Sbjct: 116 ARWGNRRAVFAGDWLLAQAAQLSCALGPRAVRLNAVTADRLVR------------GQALE 163 Query: 167 IQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + + + K+ +L+ + + GA+ A A + + L +GE LG+ FQ+ Sbjct: 164 LLGPGPGTAPLDHYLRVTAGKSASLIVLSLQLGALQAGAPEAYADVLAEYGEQLGLAFQM 223 Query: 224 ADDLLD 229 +DD+LD Sbjct: 224 SDDILD 229 >gi|145296134|ref|YP_001138955.1| hypothetical protein cgR_2054 [Corynebacterium glutamicum R] gi|140846054|dbj|BAF55053.1| hypothetical protein [Corynebacterium glutamicum R] Length = 366 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 40/214 (18%) Query: 45 YALLGGKKIRS------FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 + L GGK+IR FL + + + L A++E I +LIHDD+ +D+ Sbjct: 50 FVLNGGKRIRPLYAWAGFLAAQGLKNSSERLESVLDAAASLEFIQACALIHDDI--IDSS 107 Query: 99 YIRRGKPTVH--IQYDE--------------VTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 RRG PTVH ++ D +I+AG+ L +A ++ L+D+ Sbjct: 108 DTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDM-------LQDSG 160 Query: 143 RSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFM---IQKMKTGAL-MCFACE 194 S L+ T + +GM +GGQ+LDI E V + + + KT A + Sbjct: 161 LSAEALARTRD-AWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLH 219 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A S + L +G ++GI FQL DDLL Sbjct: 220 LGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLL 253 >gi|223996715|ref|XP_002288031.1| geranylgeranyl diphosphate synthase [Thalassiosira pseudonana CCMP1335] gi|220977147|gb|EED95474.1| geranylgeranyl diphosphate synthase [Thalassiosira pseudonana CCMP1335] Length = 320 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 86/167 (51%), Gaps = 20/167 (11%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL HDD+ +D RRG+P H + AI+AG+ LL A ++ Sbjct: 62 RLAEITEMIHTASLFHDDV--IDEADTRRGQPAAHRAFGNKMAILAGDYLLARASICLA- 118 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM-KTGALMC 190 +L++ + M ++ ++ ++ G++L I+D + + + ++ + KT +LM Sbjct: 119 ---RLRNVDVVECMSTV-----IEHLVRGEVLQIKDNRTGVPDMEGYLRKNFYKTASLMA 170 Query: 191 FACESGAIMAHASQNEK------ERLRCFGENLGIIFQLADDLLDCE 231 +C+S A++ ++ E +G+++G+ FQL DD LD E Sbjct: 171 NSCKSAALLGASANGSGISPVVVEAAYLYGKHIGVAFQLIDDALDFE 217 >gi|62898389|dbj|BAD97134.1| trans-prenyltransferase variant [Homo sapiens] Length = 415 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDVSSRR 190 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E A++AG+ +L+ A ++ +I +Q++ L LQ LG Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 248 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E +E ++K KT +L+ +C++ +++ E +G+++GI Sbjct: 249 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKDVGIA 302 Query: 221 FQLADDLLD 229 FQL DD+LD Sbjct: 303 FQLIDDVLD 311 >gi|259047925|ref|ZP_05738326.1| polyprenyl synthetase [Granulicatella adiacens ATCC 49175] gi|259035422|gb|EEW36677.1| polyprenyl synthetase [Granulicatella adiacens ATCC 49175] Length = 325 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 21/201 (10%) Query: 42 AIRYALL-----GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 AI+ A+L GGK +R ++L+ N N L + AA+E +H +L HDD+ + Sbjct: 35 AIKDAILSVLDSGGKMVRPAYLILFSMWNDNRNKEEVLAIAAALELLHVATLFHDDV--I 92 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D +RRG+ T+ + AI AG+ LLT ++++SS KD + Q+ S G Sbjct: 93 DESSVRRGQETISAKLGNRVAIYAGDYLLTVCYQLLSSYS---KDLVNIQIPTS-----G 144 Query: 156 LQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRC 212 + ++ G++ +++ + +D T ++++ KT L +C G + E+ R R Sbjct: 145 MMQVIQGELSQMEERYRLDVTVQDYLKRIEGKTAQLFMLSCVMGE--QFSVLKEEARARQ 202 Query: 213 FGENLGIIFQLADDLLDCEED 233 G +G+ FQ+ DD+LD E D Sbjct: 203 IGHAIGMSFQILDDILDYEID 223 >gi|284928810|ref|YP_003421332.1| solanesyl diphosphate synthase [cyanobacterium UCYN-A] gi|284809269|gb|ADB94974.1| solanesyl diphosphate synthase [cyanobacterium UCYN-A] Length = 323 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 21/189 (11%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK IR LV++ L R+ E IH SL+HDD+ +D +RR P Sbjct: 44 GGKHIRPAIVLLVSKATMLEGDITPHHRRLAEITEMIHTASLVHDDI--VDEAVLRRNVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQ 163 TV+ +D A++AG+ L + +++ DN++ +LS +G + G Sbjct: 102 TVNSLFDNRIAVLAGDFLFAQSSWYLAN-----LDNLQVVKLLSEVIRDFAEGEISQGIN 156 Query: 164 MLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 D D ++D++ KT +L+ + +S I++++S + + +G LG+ Sbjct: 157 RFDTSLTLDSYLDKSY------YKTASLIANSAKSATILSNSSLDIINSIYTYGRCLGLA 210 Query: 221 FQLADDLLD 229 FQ+ DD+LD Sbjct: 211 FQIVDDILD 219 >gi|255324689|ref|ZP_05365803.1| bifunctional short chain isoprenyl diphosphate synthase [Corynebacterium tuberculostearicum SK141] gi|255298164|gb|EET77467.1| bifunctional short chain isoprenyl diphosphate synthase [Corynebacterium tuberculostearicum SK141] Length = 334 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 32/200 (16%) Query: 49 GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+ R + L +E + ++ +E +H +L HDD+ MD RRG Sbjct: 55 GGKRFRPMMALLASEYGPRPGCKEV--VKAATVVEMVHVATLYHDDV--MDEADRRRGVE 110 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIG-----LQGM 159 + + +++ AI+AG+ LL +A S+LM L TH +G + + Sbjct: 111 SANSRWNNSVAILAGDALLAHA----------------SRLMSELDTHTVGHFADTFEEL 154 Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 + GQM + E + + KT L+ A GA + AS L G + Sbjct: 155 VTGQMRETIGAGEANAVEHYTAVIREKTAVLIASAGYLGAYHSGASAEHAAALHRIGGAI 214 Query: 218 GIIFQLADDLLDCEEDLPKK 237 G+IFQ+ DD++D D PK+ Sbjct: 215 GMIFQIVDDVIDIFSD-PKE 233 >gi|213420464|ref|ZP_03353530.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 244 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 8/148 (5%) Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 +L+HDD+ +D +RRGK T + + +++ G+ + T AF++++S + ++ Sbjct: 1 TLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVL 53 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 ++S N+ +G + Q++++ D I E + KT L A + I+A + Sbjct: 54 EVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPE 112 Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233 +++ L+ +G LG FQL DDLLD D Sbjct: 113 QEKGLQDYGRYLGTAFQLIDDLLDYSAD 140 >gi|50285865|ref|XP_445361.1| hypothetical protein [Candida glabrata CBS 138] gi|49524665|emb|CAG58267.1| unnamed protein product [Candida glabrata] Length = 471 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 40/194 (20%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL---TYAFEI 130 R+ +E IH SL+HDD+ +D RRG+P+ ++ + A++AG+ LL T A Sbjct: 175 RLAEIVEMIHTASLLHDDV--IDYSDTRRGRPSGNVAFSNKMAVLAGDFLLGRATVAISR 232 Query: 131 ISSPK-TQLKDN-----IRSQLMLSLTHNIGLQGMLGGQMLDI----------------- 167 + +P+ +L N + + M + Q ++G + I Sbjct: 233 LKNPEVVELMSNSIANLVEGEFMQLKNMAVEDQPLVGSKNDKILPPPSKKLELKEHDYRV 292 Query: 168 ----------QDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 +E I+ + + K +KT AL+ + + AI++ A E FG Sbjct: 293 ATPEATGSFSHEEVINIAFEYYLHKTYLKTAALISKSSRAAAILSGARDPVIEECYSFGR 352 Query: 216 NLGIIFQLADDLLD 229 N+GI FQL DDLLD Sbjct: 353 NIGICFQLVDDLLD 366 >gi|311739255|ref|ZP_07713092.1| trans-hexaprenyltranstransferase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305681|gb|EFQ81747.1| trans-hexaprenyltranstransferase [Corynebacterium pseudogenitalium ATCC 33035] Length = 334 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 32/200 (16%) Query: 49 GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+ R + L +E + ++ +E +H +L HDD+ MD RRG Sbjct: 55 GGKRFRPMMALLASEYGPRPGCEEV--VKAATVVEMVHVATLYHDDV--MDEADRRRGVE 110 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIG-----LQGM 159 + + +++ AI+AG+ LL +A S+LM L TH +G + + Sbjct: 111 SANSRWNNSVAILAGDALLAHA----------------SRLMSELDTHTVGHFADTFEEL 154 Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 + GQM + E + + KT L+ A GA + AS L G + Sbjct: 155 VTGQMRETIGAGEANAVEHYTAVIREKTAVLIASAGYLGAYHSGASAEHAAALHRIGGAI 214 Query: 218 GIIFQLADDLLDCEEDLPKK 237 G+IFQ+ DD++D D PK+ Sbjct: 215 GMIFQIVDDVIDIFSD-PKE 233 >gi|90994460|ref|YP_536950.1| prenyl transferase [Porphyra yezoensis] gi|122194707|sp|Q1XDL8|PREA_PORYE RecName: Full=Prenyl transferase gi|90819024|dbj|BAE92393.1| prenyl transferase [Porphyra yezoensis] Length = 323 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R FLV + S + R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRVRPALVFLVAKATSEKQDINTGQKRLAEITEIIHTASLVHDDI--IDECTTRRGVK 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH ++ A++AG+ L + +++ + S+++ QG++ Sbjct: 102 TVHNLFNTKIAVLAGDFLFAQSSWYLANIENLAVVKAISKVITDFAEGEIRQGLVHFDPS 161 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D +I+++ KT +L+ +C A++ ++ L +G+++G+ FQ+ D Sbjct: 162 ISIDAYIEKSF------YKTASLIAASCRGAAMLNGSNHQINNDLYLYGKHMGLAFQIMD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DVLD 219 >gi|229891676|sp|P0C9E2|TPRT_ASFK5 RecName: Full=Trans-prenyltransferase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; AltName: Full=Polyprenyl-diphosphate synthase Length = 318 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 40/244 (16%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 P + S+ +TIL++ + +L YAL GGK IR ++ E Sbjct: 46 PKNYKTFSEEFETILNNAI------EDGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99 Query: 66 NVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + H + A+E H SLI DD+PS DN RR K TV ++ A ++ Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159 Query: 121 NGLLTYAFEIISSPKTQLKDN---------IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171 L F+ I +K+N + + L ++H++ G GQ++D ++ Sbjct: 160 LALTMQGFQNICRQVDWIKENCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPEKT 217 Query: 172 IDETQVFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I ++ I + TG + + GAI A CFG FQLADD+ D Sbjct: 218 IPFFKIAFIMGWVLGTGTIE----DIGAIERAA--------HCFGN----AFQLADDIKD 261 Query: 230 CEED 233 + D Sbjct: 262 HDTD 265 >gi|118595231|ref|ZP_01552578.1| trans-hexaprenyltranstransferase [Methylophilales bacterium HTCC2181] gi|118441009|gb|EAV47636.1| trans-hexaprenyltranstransferase [Methylophilales bacterium HTCC2181] Length = 321 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 14/184 (7%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L + N +H + A IE IH +L+HDD+ +D RR K Sbjct: 42 GGKRMRPSIHLLFAKLTGEINTSHHA---MAAIIEFIHTATLLHDDV--VDQSTQRRSKK 96 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T + + ++++ G+ + + +F+++ T++ + +++ T+ I +L Q+L Sbjct: 97 TANALFGNSSSVLVGDFIYSRSFQMM----TKINNMEVMEILADATNAISEGEIL--QLL 150 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + ++ + E F + KT L ++ Q +++ L G GI+FQL D Sbjct: 151 NTKNPDLSENDYFQVIGFKTAKLFESCGSLAGVLNEVDQEKQKDLAKLGNIFGIMFQLTD 210 Query: 226 DLLD 229 D+LD Sbjct: 211 DILD 214 >gi|9628182|ref|NP_042768.1| prenyltransferase [African swine fever virus] gi|82051504|sp|Q65164|TPRT_ASFB7 RecName: Full=Trans-prenyltransferase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; AltName: Full=Polyprenyl-diphosphate synthase gi|780444|gb|AAA65304.1| prenyltransferase [African swine fever virus] gi|162849284|emb|CAN10174.1| Prenyltransferase [African swine fever virus Benin 97/1] gi|162849457|emb|CAN10424.1| Prenyltransferase [African swine fever virus OURT 88/3] gi|291289519|emb|CBH29176.1| BA71V-B318L [African swine fever virus E75] gi|1097465|prf||2113434CC prenyltransferase Length = 318 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 97/242 (40%), Gaps = 36/242 (14%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 P + SK +TIL++ + +L YAL GGK IR ++ E Sbjct: 46 PKNYKTFSKEFETILNNAI------EDGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99 Query: 66 NVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + H + A+E H SLI DD+PS DN RR K TV ++ A ++ Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159 Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171 L F+ I P+ + + + L ++H++ G GQ++D ++ Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPEKT 217 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I F I + L E ++ A+ CFG FQLADD+ D + Sbjct: 218 I---PFFKIAFIMGWVLGTGTIEDIGMIERAAH-------CFGH----AFQLADDIKDHD 263 Query: 232 ED 233 D Sbjct: 264 TD 265 >gi|25028623|ref|NP_738677.1| putative polyprenyl synthase [Corynebacterium efficiens YS-314] gi|259507682|ref|ZP_05750582.1| polyprenyl synthetase [Corynebacterium efficiens YS-314] gi|23493909|dbj|BAC18877.1| putative polyprenyl synthase [Corynebacterium efficiens YS-314] gi|259164729|gb|EEW49283.1| polyprenyl synthetase [Corynebacterium efficiens YS-314] Length = 366 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 35/217 (16%) Query: 40 LSAIR-YALLGGKKIR------SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 LS +R + L GGK+IR F+ + + + L A++E I +LIHDD+ Sbjct: 44 LSYLRDFVLNGGKRIRPLYVWAGFVAAQGPGRSSEDINAVLDAAASLEFIQACALIHDDI 103 Query: 93 PSMDNGYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKT 136 +D+ RRG PTVH + E AI+AG+ L +A +++ Sbjct: 104 --IDSSDTRRGAPTVHRAVESMHGAVGLEGDAAHFGESVAILAGDMALVWAEDMLQDSGL 161 Query: 137 QLKDNIRSQLMLSLTHNIGLQG-MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195 L + G++ ++GGQ+LDI E V + + + E Sbjct: 162 SAA-----ALARARDAWRGMRTEVIGGQLLDIYLEAQASESVELANSVNRFKTAAYTIER 216 Query: 196 ----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A + + LR +G ++GI FQL DDLL Sbjct: 217 PLHLGASLAGGAPELIDALRNYGRDIGIAFQLRDDLL 253 >gi|257784150|ref|YP_003179367.1| Polyprenyl synthetase [Atopobium parvulum DSM 20469] gi|257472657|gb|ACV50776.1| Polyprenyl synthetase [Atopobium parvulum DSM 20469] Length = 347 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 102/239 (42%), Gaps = 35/239 (14%) Query: 4 GLP----SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59 GLP S +S+R L+ L Q +H ++ GGK++R L Sbjct: 21 GLPAASTSPANASSERTHADLNTYLYQPLAH--------------FSAGGGKRVRPVLCC 66 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + AL VG AIE +LIHDD+ D +RRG+ ++ AI Sbjct: 67 LGAEAVGGSAEAALPVGCAIEDFQSAALIHDDIA--DKSELRRGEKCLYKTLGTGLAINV 124 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQL---MLSLTHNIGLQGMLGGQMLDI---QDEFID 173 G+ L ++ L D I+ ++ +LS+ + L GQ LD+ Q+E D Sbjct: 125 GDSALVNVVRRVTVAD-HLSDQIKVRVIDALLSMEEHT-----LEGQALDLGWAQNERWD 178 Query: 174 ETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T +FM + GA++ A Q + L+ FG +G+ FQL DDLL+ Sbjct: 179 VTSDQYLFMALSKTAYYSAAYPLVLGALIGGADQKTLDALKDFGLKVGLAFQLQDDLLN 237 >gi|240168232|ref|ZP_04746891.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium kansasii ATCC 12478] Length = 352 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 37/212 (17%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMDN 97 +AL GGK++R + + + +T L++ +A+E +H ++LIHDD+ +D Sbjct: 37 FALRGGKRLRPVF-----AYWGWHAVTTEEPGPEILQLFSALELLHAWALIHDDV--IDA 89 Query: 98 GYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISS-PKTQLKD 140 RRG+PT H+ Q+ AI+ G+ +A +I+S +T L Sbjct: 90 SSTRRGRPTAHVHFAALHRERNWLGPAHQFGISAAILLGDVAQAWADDIVSEVGQTSLPP 149 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 + ++ + + I + +LGGQ LDI E + + + T C+ + Sbjct: 150 DA-ARRVRRVWSGIRTE-VLGGQYLDIVAEASAASSIASAMTVATFKTACYTVSRPLQLG 207 Query: 201 HASQNEKERLRC----FGENLGIIFQLADDLL 228 A+ ++ + FG +LG+ FQL DD+L Sbjct: 208 VAAAADRPDVAAAFHQFGTDLGVAFQLRDDVL 239 >gi|229490670|ref|ZP_04384508.1| bifunctional short chain isoprenyl diphosphate synthase [Rhodococcus erythropolis SK121] gi|229322490|gb|EEN88273.1| bifunctional short chain isoprenyl diphosphate synthase [Rhodococcus erythropolis SK121] Length = 359 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 16/187 (8%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +A+ A GGK+ R A L V N + + E +H +L HDD+ MD Sbjct: 71 AALHLARAGGKRFRPLFTILTAQLGPVPNDPSIITAATVTELVHLATLYHDDV--MDEAS 128 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG P+ + ++ AI+AG+ L +A ++S T + +R +++ T + Sbjct: 129 MRRGAPSANARWGNSVAILAGDYLFAHASRLVS---TLGPEAVR---IIAET----FAEL 178 Query: 160 LGGQM---LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 + GQM + ++ E + KTG+L+ + G + A ERL G+ Sbjct: 179 VTGQMRETIGVKKEQDPVEHYLKVVWEKTGSLIAASGRFGGTFSGADAAHIERLERLGDA 238 Query: 217 LGIIFQL 223 +G FQ+ Sbjct: 239 VGTAFQI 245 >gi|320103110|ref|YP_004178701.1| polyprenyl synthetase [Isosphaera pallida ATCC 43644] gi|319750392|gb|ADV62152.1| Polyprenyl synthetase [Isosphaera pallida ATCC 43644] Length = 364 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 34/251 (13%) Query: 11 ENSKRIDTILDDLLLQTASHM--QTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---- 64 E+ RID L + QT Q + A+++ L GGK+IR L + Sbjct: 21 EDRARIDARLTRVFDQTRRRYACNPQVAPLVEEALKFTLEGGKRIRPRLCLAAYRILTQR 80 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE---VTA----- 116 F V +E +H + L+HDDL MD RR +PT+H +Y E V+A Sbjct: 81 FEPPPAPVWNVAVVLEALHAFMLVHDDL--MDQSLTRRDRPTLHERYREGLNVSARTAGD 138 Query: 117 --IIAGNGLLTYAFEIISSPK---TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-- 169 I+AG+ + A ++ T+L +R ++ + GL GQ LD+ Sbjct: 139 LGIVAGDWMFALAIRMLGRAGLQGTRLARVVR--IIAEMLIETGL-----GQSLDLLHDG 191 Query: 170 ---EFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E I E + + + KT + GA +A+A + L FG+ LG +Q+ + Sbjct: 192 RSLESITEEDITTLYRWKTARYTVSGPLVLGAALANAPAATRRCLNRFGDLLGFGYQICN 251 Query: 226 DLLDCEEDLPK 236 DL E+DL + Sbjct: 252 DLESLEDDLER 262 >gi|311741515|ref|ZP_07715339.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303685|gb|EFQ79764.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035] Length = 359 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 37/211 (17%) Query: 45 YALLGGKKIRSFLVTE---CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 + L GGK++R A + LR A++E I +LIHDD+ +D R Sbjct: 46 FVLDGGKRVRPTYAWAGYLAAGRGEEDPAAMLRAAASLEFIQACALIHDDI--IDASNTR 103 Query: 102 RGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 RG PTVH +++ AI+ G+ L YA ++ +D+ S Sbjct: 104 RGNPTVHRGVEKLHRESEYLGDPEFFGTSVAILVGDLALVYAEDM-------FQDSGLSA 156 Query: 146 LMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GA 197 L + +GM +GGQ+LDI E V + + + E GA Sbjct: 157 AALHRARSP-WRGMRTEVIGGQLLDISLEAAGSESVELANSVNRYKTAAYTIERPLHLGA 215 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +A AS+ R +G ++GI +QL DD L Sbjct: 216 AIAGASEELIAAFRGYGHDIGIAYQLRDDQL 246 >gi|226305198|ref|YP_002765156.1| polyprenyl diphosphate synthase [Rhodococcus erythropolis PR4] gi|226184313|dbj|BAH32417.1| putative polyprenyl diphosphate synthase [Rhodococcus erythropolis PR4] Length = 349 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 16/187 (8%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +A+ A GGK+ R A L V N + + E +H +L HDD+ MD Sbjct: 61 AALHLARAGGKRFRPLFTILTAQLGPVPNDPSIITAATVTELVHLATLYHDDV--MDEAS 118 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG P+ + ++ AI+AG+ L +A ++S T + +R +++ T + Sbjct: 119 MRRGAPSANARWGNSVAILAGDYLFAHASRLVS---TLGPEAVR---IIAET----FAEL 168 Query: 160 LGGQM---LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 + GQM + ++ E + KTG+L+ + G + A ERL G+ Sbjct: 169 VTGQMRETIGVKKEQDPVEHYLKVVWEKTGSLIAASGRFGGTFSGADAAHIERLERLGDA 228 Query: 217 LGIIFQL 223 +G FQ+ Sbjct: 229 VGTAFQI 235 >gi|225158893|ref|ZP_03725207.1| polyprenyl synthetase [Opitutaceae bacterium TAV2] gi|224802511|gb|EEG20769.1| polyprenyl synthetase [Opitutaceae bacterium TAV2] Length = 429 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 11/158 (6%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +R A +E +H +L+HDD+ MD +RR +PT +Y A++ G+ LL +A + S Sbjct: 172 VRAAAVVELVHLATLVHDDI--MDEADVRRNRPTAARKYGSEAAVLLGDALLAHAVYLAS 229 Query: 133 S-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 P T++ + SQ + +Q + G DI D + +KT L Sbjct: 230 QFPTTEVCAAV-SQSTRKVCAGEIVQTLRRGTT-DISRADYDR-----VIDLKTAELFRV 282 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +C GA ++ + FG +LGI +Q+ DDL D Sbjct: 283 SCHLGARLS-GHPDFAPAASTFGRHLGIAYQIYDDLAD 319 >gi|240169241|ref|ZP_04747900.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium kansasii ATCC 12478] Length = 335 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 16/182 (8%) Query: 49 GGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A + + + GA +E IH +L HDD+ MD +RRG P+ Sbjct: 55 GGKRFRPLFTVLSAQVGPDPEAEEVIIAGAVVELIHLATLYHDDV--MDEAEVRRGAPSA 112 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ LL A ++S + +T GQM + Sbjct: 113 NARWGNNVAILAGDYLLATASRLVSRLGPAAVRIVADTFAALVT----------GQMRET 162 Query: 168 Q--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + E D + ++ + KTG+L+ A GA+ + A ++ ERL G +G FQ+A Sbjct: 163 RGAPEGADLIEQYLTVVHEKTGSLIGAAGRFGAMFSGADGDQVERLSRLGGIVGTAFQIA 222 Query: 225 DD 226 DD Sbjct: 223 DD 224 >gi|166362742|ref|YP_001655015.1| solanesyl diphosphate synthase [Microcystis aeruginosa NIES-843] gi|166085115|dbj|BAF99822.1| solanesyl diphosphate synthase [Microcystis aeruginosa NIES-843] Length = 323 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 11/184 (5%) Query: 49 GGKKIRS--FLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L+ A++ + + R A I E IH SL+HDD+ +D +RR P Sbjct: 44 GGKRVRPAIVLLVSRATMLDRDITPRHRRLAEITEMIHTASLVHDDV--VDEAELRRRVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TV+ +D A++AG+ L + +++ DN+ +LS +G + Q + Sbjct: 102 TVNSLFDNRVAVLAGDFLFAQSSWYLAN-----LDNLEVVKLLSEVIRDFAEGEIQ-QGI 155 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D I KT +L+ + ++ +++ S L +G +LG+ FQ+ D Sbjct: 156 NRFDTSISLAAYLEKSYYKTASLIANSAKAAGVLSEQSAEVNHHLYNYGRDLGLAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|88808408|ref|ZP_01123918.1| Trans-hexaprenyltranstransferase [Synechococcus sp. WH 7805] gi|88787396|gb|EAR18553.1| Trans-hexaprenyltranstransferase [Synechococcus sp. WH 7805] Length = 323 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R LV+ S R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLVSRGLSPEGELSPRHRRLAEITEMIHTASLVHDDV--VDEAGTRRGVE 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +++ A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLFRYDTG 161 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +++++ KT +L+ + + +++ ++ + E L +G LG+ FQ+ D Sbjct: 162 QTFETYLEKSYC------KTASLIANSARAAGVLSGCTEPQLESLYHYGRQLGLAFQVVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|296415815|ref|XP_002837581.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633454|emb|CAZ81772.1| unnamed protein product [Tuber melanosporum] Length = 343 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 11/168 (6%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T R+ +E IH +L+HDD+ +D RRG P+ + +I+AG+ +L A Sbjct: 74 TQRRLAEIVELIHTATLLHDDV--LDQAETRRGNPSANSLSGNKLSILAGDYMLGRASVY 131 Query: 131 ISSPKTQLKDNIRSQLMLSLTHN--IGLQGMLGGQMLDIQDEFIDETQV-----FMIQK- 182 ++ + + ++++ L + LQ G D + E + + ++K Sbjct: 132 LARLRNPEVIELLAEVIAELVKGELLQLQNTATGTTADFTSKSSREAHLRDSLEYYLEKT 191 Query: 183 -MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +K+ +L+ +C + A++ A+++ + +G +LG+ FQL DD+LD Sbjct: 192 YLKSASLISKSCRATAVLGGATEDVAAKAYSYGRHLGLAFQLVDDVLD 239 >gi|154249013|ref|YP_001409838.1| polyprenyl synthetase [Fervidobacterium nodosum Rt17-B1] gi|154152949|gb|ABS60181.1| Polyprenyl synthetase [Fervidobacterium nodosum Rt17-B1] Length = 341 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 30/206 (14%) Query: 44 RYALLGGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 + L GK++R L+ + + ++ A+ AAIE +H + L+HDD+ +DN +RR Sbjct: 38 EFTLRPGKRVRPLLLLLSYNGYKGKNMDDAITFAAAIEIMHSFLLVHDDI--IDNADLRR 95 Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH- 152 GKPT+H Y++ AI+ G+ + Y F I+S K ++ +++ + + Sbjct: 96 GKPTLHKTYEKSYNSSKLGTDLAIVVGDIVAFYIFGILSELKVS--ESTLKKIVKNFSKC 153 Query: 153 --NIGLQGMLGGQMLD------IQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHAS 203 N G GQ+LD I D+ ++E I ++KT + G ++ + Sbjct: 154 YVNTGF-----GQLLDILYAGRIDDKIVNEDIPEKISELKTAYYTFVYPMLFGYYLSENN 208 Query: 204 QNEKERLRCF-GENLGIIFQLADDLL 228 ++E G+N GI FQ DD++ Sbjct: 209 IEKEEEKILIVGKNAGIAFQYRDDII 234 >gi|183983198|ref|YP_001851489.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium marinum M] gi|183176524|gb|ACC41634.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium marinum M] Length = 340 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 47/178 (26%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTY 126 H ++LIHDD+ +D RRG+PT H+ Q+ AI+ G+ + Sbjct: 65 HAWALIHDDV--IDASSTRRGRPTAHMHFAALHRDRNWLGPAQQFGISAAILIGDVAQAW 122 Query: 127 AFEIIS-------SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174 A +IIS SP Q + +IR+++ LGGQ LDI E Sbjct: 123 ADDIISRVSQSSLSPDAQRRVQRVWSDIRTEV-------------LGGQYLDIVAEASAA 169 Query: 175 TQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + T C+ GA A + +E FG +LG+ FQL DD+L Sbjct: 170 DSITSAMTVATFKTACYTVSRPLQLGAAAAADRPDVQEAFHQFGTDLGVAFQLRDDVL 227 >gi|306835165|ref|ZP_07468202.1| trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC 49726] gi|304568954|gb|EFM44482.1| trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC 49726] Length = 334 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 32/199 (16%) Query: 49 GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+ R + L +E + + ++ +E +H +L HDD+ MD RRG Sbjct: 55 GGKRFRPMMALLASEYGAKPGCEEV--IKSATVVEMVHVATLYHDDV--MDEADRRRGVE 110 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIG-----LQGM 159 + + +++ AI+AG+ LL +A S+LM L TH +G + + Sbjct: 111 SANSRWNNSVAILAGDALLAHA----------------SRLMSQLDTHTVGHFADTFEEL 154 Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 + GQM + E + + KT L+ A GA + AS + L G + Sbjct: 155 VTGQMRETIGAGEANPVDHYMAVIQEKTAVLIASAGYLGAYHSGASADHAAALYRIGGAI 214 Query: 218 GIIFQLADDLLDCEEDLPK 236 G+IFQ+ DD++D D PK Sbjct: 215 GMIFQIVDDVIDIFSD-PK 232 >gi|261884869|ref|ZP_06008908.1| polyprenyl synthetase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 243 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 40/228 (17%) Query: 14 KRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 +RID IL D L AS M +Q + GKK+RS L+ + A Sbjct: 2 ERIDDILKEFVDSLNYPLASEMFSQVS------------SGKKLRSKLILKIAGASE--- 46 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + ++ + +E IH S++HDD+ +D+ IRRGKP+++ + +I+ G+ L + F Sbjct: 47 -ASFKLSSVVEIIHLASVLHDDV--IDDSLIRRGKPSINAIFGTKNSIMLGDILYSKGFN 103 Query: 130 IISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKT 185 I ++ D I + LS+ G+++D++ F D+ + + KT Sbjct: 104 EIVKFDMKIADIISDAVCKLSI-----------GELMDVELGSSFNADKEKYLKMIYFKT 152 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ A +S A + ++++ +G+NLG+ FQ+ DD+LD D Sbjct: 153 AVLIEAAAKS---AAILAGFDEQKYGDYGKNLGLAFQIVDDILDITSD 197 >gi|163841244|ref|YP_001625649.1| dimethylallyltransferase [Renibacterium salmoninarum ATCC 33209] gi|162954720|gb|ABY24235.1| dimethylallyltransferase [Renibacterium salmoninarum ATCC 33209] Length = 362 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 90/218 (41%), Gaps = 36/218 (16%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSM 95 L+ I + GGK++R+ L N T+ + GAA+E +LIHDD+ + Sbjct: 42 LIDTISGLVTGGKRMRALLCYWGWRGAGGNPETSSPITTAGAALELFQAAALIHDDI--I 99 Query: 96 DNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLK 139 D IRRG P+VH Q+ ++ AI+AG+ L+++ E+ SS Sbjct: 100 DRSDIRRGAPSVHRQFSQLHQRQRWALDPERFGHAAAILAGDLCLSFSEEVFSSINVPAP 159 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCFACE 194 RS N ++ GQ LDI +E E V Q + ++ E Sbjct: 160 QKARS------VFNTMRAEVMAGQYLDILEEVAGPSRGPENAVERAQSIIRYKSAKYSSE 213 Query: 195 S----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 G +A A N F LG FQL DD+L Sbjct: 214 HPLVLGGALAGADANLLSGYSAFALPLGEAFQLRDDML 251 >gi|257053117|ref|YP_003130950.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940] gi|256691880|gb|ACV12217.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940] Length = 346 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 30/213 (14%) Query: 38 RLLSAIRYAL-LGGKKIR-SFLVTECASLFNV--------------NHLTALRVGAAIEC 81 +L A RY L GGK++R + L+ S+ +V + + +IE Sbjct: 36 KLYEASRYLLDAGGKRLRPTILLLVAESIADVLPRSEPYREFPAAEGPIDMMSAAVSIEI 95 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 I ++LIH MD+ +RRG P VH ++D TAI+AG+ L AFE + + + Sbjct: 96 IQSFTLIH--DDIMDDDDMRRGVPAVHREFDLSTAILAGDTLYAKAFENMLETGSTGDRS 153 Query: 142 IR--SQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESG 196 +R S+L + T + GQ +DI+ DE + + ++KT L A Sbjct: 154 VRALSELATTCTQ------ICEGQSMDIEFETDETVTTEDYLEMVELKTAVLYAAAASIP 207 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I+ + + L +G N+G FQ+ DDLLD Sbjct: 208 PIL-MGEDDYVDPLYQYGLNIGRGFQIQDDLLD 239 >gi|89075549|ref|ZP_01161954.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34] gi|89048689|gb|EAR54261.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34] Length = 323 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPMLAVLAARALGYDGDKHTTAAAFIEFIHTATLLHDDV--VDESNMRRGKETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L + + AI+A A + L+ +G LG FQL DD+L Sbjct: 155 DPNTTEDSYMQVIYSKTARLFEASTQIAAIIAQAPAEIELALQEYGRYLGTAFQLIDDVL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|290790227|pdb|3LK5|A Chain A, Crystal Structure Of Putative Geranylgeranyl Pyrophosphate Synthase From Corynebacterium Glutamicum gi|325054159|pdb|3QQV|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Corynebacterium Glutamicum Complexed With Isoprenyl Diphosphate And Magnesium Length = 380 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 40/214 (18%) Query: 45 YALLGGKKIRS------FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 + L GGK+IR FL + + + L A++E I +LIHDD+ +D+ Sbjct: 57 FVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALIHDDI--IDSS 114 Query: 99 YIRRGKPTVH--IQYDE--------------VTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 RRG PTVH ++ D +I+AG+ L +A + L+D+ Sbjct: 115 DTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDXALVWA-------EDXLQDSG 167 Query: 143 RSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQVFM---IQKMKTGAL-MCFACE 194 S L+ T + +G ++GGQ+LDI E V + + + KT A + Sbjct: 168 LSAEALARTRD-AWRGXRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLH 226 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A S + L +G ++GI FQL DDLL Sbjct: 227 LGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLL 260 >gi|227502598|ref|ZP_03932647.1| possible trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC 49725] gi|227076638|gb|EEI14601.1| possible trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC 49725] Length = 334 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 32/199 (16%) Query: 49 GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+ R + L +E + + ++ +E +H +L HDD+ MD RRG Sbjct: 55 GGKRFRPMMALLASEYGAKPGCEKV--IKSATVVEMVHVATLYHDDV--MDEADRRRGVE 110 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIG-----LQGM 159 + + +++ AI+AG+ LL +A S+LM L TH +G + + Sbjct: 111 SANSRWNNSVAILAGDALLAHA----------------SRLMSQLDTHTVGHFADTFEEL 154 Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 + GQM + E + + KT L+ A GA + AS + L G + Sbjct: 155 VTGQMRETIGAGEANPVDHYMAVIQEKTAVLIASAGYLGAYHSGASADHAAALYRIGGAI 214 Query: 218 GIIFQLADDLLDCEEDLPK 236 G+IFQ+ DD++D D PK Sbjct: 215 GMIFQIVDDVIDIFSD-PK 232 >gi|162451281|ref|YP_001613648.1| trans-octaprenyltranstransferase [Sorangium cellulosum 'So ce 56'] gi|161161863|emb|CAN93168.1| Trans-octaprenyltranstransferase [Sorangium cellulosum 'So ce 56'] Length = 336 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%) Query: 26 QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85 +T +H +H LL L GK++R V + + + + A A+E +H Sbjct: 40 ETPAHRSARH---LLG------LNGKRLRPICVALASHIGSGFNDAARTFAVAVELVHNA 90 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 +L+HDD+ +D G RRG + Y +I G+ LL A I + ++ + Sbjct: 91 TLLHDDV--VDLGDRRRGADAARVIYGNAASIFGGDYLLLDALSKIQAVGMT---DVLER 145 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 ++L + + + + Q+ ++ F I KT +L +A +GA ++ Sbjct: 146 VLLVIKEMVVAEAL---QLASRGRVRTSTSEYFQIVDGKTASLFRWAMFAGARAGGVNEP 202 Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233 + L FG +LG+ FQL DD+LD D Sbjct: 203 LCKALESFGTSLGVAFQLVDDVLDFAGD 230 >gi|189346622|ref|YP_001943151.1| Polyprenyl synthetase [Chlorobium limicola DSM 245] gi|189340769|gb|ACD90172.1| Polyprenyl synthetase [Chlorobium limicola DSM 245] Length = 324 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 33/206 (16%) Query: 44 RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 RY L GK+IR LV A + R +E +H +LIHDD+ +D +RR Sbjct: 37 RYVLRQQGKQIRPALVLLSAKICGGVTEVTYRAAIMVELLHSATLIHDDV--VDGAEMRR 94 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH---------N 153 G +++ + +++ G+ LL+ L+ SL H + Sbjct: 95 GLASINALWKNKISVLIGDYLLSKG------------------LLYSLDHKDYASLHTVS 136 Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 ++ M G++L IQ I E + KT +L+ +C GA A + Sbjct: 137 DAVRRMSEGEILQIQKTRSLDISEEDYISVISDKTASLIASSCAMGAASATDDDTMIAGM 196 Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236 + +GE LG+ FQ+ DDLLD D K Sbjct: 197 KRYGEYLGLAFQIRDDLLDYTGDSKK 222 >gi|118616467|ref|YP_904799.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans Agy99] gi|183980932|ref|YP_001849223.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M] gi|118568577|gb|ABL03328.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans Agy99] gi|183174258|gb|ACC39368.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M] Length = 335 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 16/184 (8%) Query: 47 LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 L GGK+ R A + N + GA IE IH +L HDD+ MD +RRG P Sbjct: 53 LAGGKRFRPLFTVLSAQVGPNPGADEVVIAGAVIEMIHLATLYHDDV--MDEAQVRRGAP 110 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + + ++ AI+AG+ LL A ++S D +R + + Q ++ GQM Sbjct: 111 SANARWGNNVAILAGDYLLATASRLVSRLG---PDAVR------IVADTFAQ-LVTGQMR 160 Query: 166 DIQ--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + + E +D + ++ + KTG L+ A G + + A + ERL G +G FQ Sbjct: 161 ETRGAPEGVDMIEQYLKVVHEKTGCLIGAAGRFGGMFSGADGEQVERLNRLGGIVGTAFQ 220 Query: 223 LADD 226 +ADD Sbjct: 221 IADD 224 >gi|325000136|ref|ZP_08121248.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1] Length = 382 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 101/260 (38%), Gaps = 38/260 (14%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI---------------RYALLG 49 +PS E + T LDD L Q + + DR + + + L G Sbjct: 10 VPSGRAEVTPAGATPLDDALPQHVERVLAGYLDRRRTDVLGVDPAVAQAADALAGFVLGG 69 Query: 50 GKKIRSFLVTE----CASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GK++R +H A L A++E I +L+HDDL MD RRG+ Sbjct: 70 GKRLRPTFAWWGWRGAGGDPGSDHAQAVLTAVASLELIQACALVHDDL--MDASSTRRGR 127 Query: 105 PTVHIQYDEVTAIIAGNGL---LTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQG- 158 PTVH+++ A +G A I+ Q+ D S + H + Sbjct: 128 PTVHVEFARTHAANDWSGPPARFGAAVAILVGDLAQVWADDMFHSAALPDGAHGRAAEPW 187 Query: 159 ------MLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKE 208 +L GQ LD+ + E+ I + KT A GA +A A Sbjct: 188 RAMRTEVLAGQYLDVLAQASGDTAESTALQIDRFKTAAYTVERPLHLGAAIAGAEPQVVN 247 Query: 209 RLRCFGENLGIIFQLADDLL 228 R +G ++G+ FQL DDLL Sbjct: 248 AYRRYGADIGVAFQLRDDLL 267 >gi|213409778|ref|XP_002175659.1| decaprenyl-diphosphate synthase subunit 1 [Schizosaccharomyces japonicus yFS275] gi|212003706|gb|EEB09366.1| decaprenyl-diphosphate synthase subunit 1 [Schizosaccharomyces japonicus yFS275] Length = 381 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 39/216 (18%) Query: 45 YALLGGKKIRS---FLVTECASLFN-VNHLTA----------------------LRVGAA 78 Y L GK++R LV+ SL N +N A LR+ Sbjct: 69 YTLAQGKQLRPSLVLLVSRAVSLLNGINRSVASERYILDCNPALLLDGDVLPSQLRLAQI 128 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 E IH SL+HDD+ +D RRG+ + +I + A+ AG+ +L A S+ +L Sbjct: 129 TEMIHVASLLHDDV--IDLATHRRGQVSGNIAFGNQQAVFAGDFILARA----STAMARL 182 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQK--MKTGALMCFAC 193 ++ ++L+ ++ ++ L Q+ ++ ++ D Q + ++K +KT +L+ +C Sbjct: 183 RNTRVTELLATVIADLIRGEFL--QLRNVDEKGGDALQASFDYYLEKSYLKTASLISKSC 240 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A++ A + + + FG LGI FQL DD LD Sbjct: 241 MAAAVLGKAVPSIVQAIGEFGRCLGIAFQLVDDALD 276 >gi|54027096|ref|YP_121338.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM 10152] gi|54018604|dbj|BAD59974.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM 10152] Length = 345 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 16/187 (8%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGY 99 +A+ A GGK+ R L AL G +E +H +L HDD+ MD Sbjct: 57 AALHLAKAGGKRFRPLFTILTGQLGPRPTDPALITAGTVVELVHLATLYHDDV--MDEAT 114 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG P+V+ ++ AI+AG+ L +A + S T D +R +++ T + Sbjct: 115 MRRGAPSVNSRWGNNIAILAGDYLFAHASRLTS---TLGPDAVR---IIAET----FAEL 164 Query: 160 LGGQMLDIQD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 + GQM + E D + ++ + KTG+L+ A G + A ERL G+ Sbjct: 165 VTGQMRETMGARESQDPVEHYLRVVWEKTGSLIAAAGRFGGTFSGADTAHIERLARLGDA 224 Query: 217 LGIIFQL 223 +G FQ+ Sbjct: 225 VGTAFQI 231 >gi|257076714|ref|ZP_05571075.1| geranylgeranyl pyrophosphate synthase [Ferroplasma acidarmanus fer1] Length = 352 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 117/249 (46%), Gaps = 36/249 (14%) Query: 7 SKLQENSKR-IDTILDDLLLQTASHMQ--------TQHNDRLLSAIRYALLGGKKIRSFL 57 S +++N K+ +D + D + Q ++ T+ D ++ + L GGK++R L Sbjct: 2 SNIEDNYKKTLDGLKDKINAQLEAYFNFKLNECDDTRIKDIIIKLRDFTLNGGKRLRPIL 61 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----- 112 + ++F+ ++ +IE + LIHDD+ MD +RRGKP+ H + Sbjct: 62 MIMGYNMFSGQDERIIKASISIELAQSFLLIHDDI--MDQSDMRRGKPSFHKAVEGSLDG 119 Query: 113 -------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 E AI AG+ + T++ E + +L++ + + S ++ GQ+L Sbjct: 120 NDATRIAENLAISAGDLIDTFSHEALLRSGFELENLLDADFEFSRI----IEDTGKGQIL 175 Query: 166 DIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEK--ERLRCFGENLGI 219 DI + E ++ + +KT + + +M A+ S N+K + ++ FG+ GI Sbjct: 176 DIYSSIENLYSEERLTKLHFLKTAR---YTVQGPLLMGAYLSGNKKYIQEIKDFGKYAGI 232 Query: 220 IFQLADDLL 228 FQL DD+L Sbjct: 233 AFQLYDDML 241 >gi|332019800|gb|EGI60261.1| Decaprenyl-diphosphate synthase subunit 1 [Acromyrmex echinatior] Length = 337 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 18/188 (9%) Query: 50 GKKIRSFLVTECASLFNVNH-----LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRG 103 GK +R A N + L + R A I E IH SL+HDD+ +D RRG Sbjct: 56 GKAVRPMFTILMARAINYHKGRNDLLYSQRQIAMISEMIHNASLLHDDV--IDQSDFRRG 113 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 KP+V++ + + +AGN +L+ A ++S + SQL+ L +Q LG + Sbjct: 114 KPSVNVLWSQKKVAMAGNYILSIACMMLSEIHSDDVTISISQLISDLVQGEFMQ--LGSK 171 Query: 164 MLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 E +E + K KT +L+ + AI+++ + E +G N+G+ F Sbjct: 172 ------ETENERFAHYLTKTYRKTASLIANCMKGVAILSNVDERTIEMAFQYGRNVGLAF 225 Query: 222 QLADDLLD 229 QL DDLLD Sbjct: 226 QLVDDLLD 233 >gi|76802911|ref|YP_331006.1| multifunctional short/ long-chain (E)-prenyl diphosphate synthase [Natronomonas pharaonis DSM 2160] gi|76558776|emb|CAI50369.1| probable multifunctional short/ long-chain (E)-prenyl diphosphate synthase [Natronomonas pharaonis DSM 2160] Length = 353 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 10/188 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R+ L + + L A E +H ++I DD+ D RRG P +H Sbjct: 60 GGKRWRAVLFLLLVEALDDDPDAYLEYAAIPEILHNGTIIVDDVE--DGATHRRGDPALH 117 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 + A+ AGN + +II+ L + R L + + + GQ +DI Sbjct: 118 HTHGTDIALNAGNAMYFLPLKIITHNPADLDADTRLAAYEMLMYELNRTHL--GQGMDIH 175 Query: 168 ----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 Q+ I E Q + KTG L AI+ + E + L + E + I FQ+ Sbjct: 176 WHNQQEIDITEDQYLEMCACKTGCLARIVARLAAIVTNNEAAESD-LAAYAEEMAIAFQI 234 Query: 224 ADDLLDCE 231 ADD+LD E Sbjct: 235 ADDVLDVE 242 >gi|309792042|ref|ZP_07686518.1| Polyprenyl synthetase [Oscillochloris trichoides DG6] gi|308225935|gb|EFO79687.1| Polyprenyl synthetase [Oscillochloris trichoides DG6] Length = 347 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 14/186 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV + A+ + A I+ +H ++LIHDD+ D+ +RRG+PT+ Sbjct: 55 GKLIRPQLVLLACQAAGGDPALAMPLAAGIQLLHDFTLIHDDIE--DDSDMRRGRPTLWH 112 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIG--LQGMLGGQMLD 166 + I AG+G+ A I QL D + ++ +L + + + GQ LD Sbjct: 113 LWGLAQGINAGDGMFVIAHLAIH----QLSDLGVPAERVLPILRRFDEVILHVCEGQFLD 168 Query: 167 IQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 I E E + MI + KT L+ + GA++A A L FG +LG+ FQ Sbjct: 169 ISFEGNLGISTEDYLAMIGR-KTAILIDGSAALGAMVAGADAATVAALSTFGRSLGLAFQ 227 Query: 223 LADDLL 228 + DD+L Sbjct: 228 IEDDIL 233 >gi|156974446|ref|YP_001445353.1| hypothetical protein VIBHAR_02161 [Vibrio harveyi ATCC BAA-1116] gi|156526040|gb|ABU71126.1| hypothetical protein VIBHAR_02161 [Vibrio harveyi ATCC BAA-1116] Length = 236 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 15/173 (8%) Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 +N A+R+ +A+E +H SLIHDD+ D +RRG+ V +++ AI G+ L+ Sbjct: 5 LGLNDEDAMRLASAVELLHNASLIHDDI--QDGDSLRRGQSAVWVKFGTNVAICTGDYLI 62 Query: 125 TYAFEI---ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQVFMI 180 AF I ISSP N+ QL+ + + + + + GQ D+ E I I Sbjct: 63 ARAFGILANISSP------NVLPQLLEATQNAVSV--TVEGQNADLTAKEHISPQNYESI 114 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + K G L+ + E I + NE R +L I +Q+ DD+ D ED Sbjct: 115 AEKKAGPLLALSLELPLI-SSGRLNEIPTARHAASSLAIAYQILDDIKDSVED 166 >gi|90580809|ref|ZP_01236612.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14] gi|90438077|gb|EAS63265.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14] Length = 323 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPMLAVLAARALGYDGDKHTTAAAFIEFIHTATLLHDDV--VDESNMRRGKETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L + + AI+A A + + +G LG FQL DD+L Sbjct: 155 DPNTTEDSYMQVIYSKTARLFEASTQIAAIIADAPAEIELAFQEYGRYLGTAFQLIDDVL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|315506436|ref|YP_004085323.1| polyprenyl synthetase [Micromonospora sp. L5] gi|315413055|gb|ADU11172.1| Polyprenyl synthetase [Micromonospora sp. L5] Length = 347 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 10/198 (5%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GK +R+ L F L +E H LIHDD+ D RRG Sbjct: 46 YPRRWGKGLRAALCLATCRAFGGGDAVGLNAAVTVELFHNAFLIHDDI--QDESEQRRGG 103 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM----LSLTHNIGLQGML 160 T+H +Y A+ GN A +++ + L I +L L + H++ Q + Sbjct: 104 RTLHAEYGVGVALNVGNMTNLLALRRLAANRAALGSGIAWRLFTETELMMRHSLEGQAIE 163 Query: 161 GGQMLD-IQDEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLG 218 G + D + D +D + + KT C + C +G ++A +N + L +G LG Sbjct: 164 IGWIRDNVCD--LDADDYYRMCLKKTSWYTCIYPCRTGILVATGRENAVDVLDRYGWYLG 221 Query: 219 IIFQLADDLLDCEEDLPK 236 FQ+ DD L+ D + Sbjct: 222 AAFQIQDDALNLTGDYAR 239 >gi|237752690|ref|ZP_04583170.1| polyprenyl synthetase [Helicobacter winghamensis ATCC BAA-430] gi|229376179|gb|EEO26270.1| polyprenyl synthetase [Helicobacter winghamensis ATCC BAA-430] Length = 306 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 22/189 (11%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GK +RS L A ++R+ A IE I SL+HDD+ +D RR KP+ Sbjct: 30 LQSGKMLRSKLALSIAG----ESEESVRLCAIIEMIQNASLLHDDV--IDKATTRRNKPS 83 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIIS-----SPK-TQLKDNIRSQLMLSLTHNIGLQGML 160 V+ + + AI+ G+ L + AF ++ P+ ++ N + L + ++ L G Sbjct: 84 VNALFGDKNAIMLGDVLYSKAFSELTCFAKDYPQIPRIVANAVTTLAIGEIEDVALSGAF 143 Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 DE + + + KT AL+ + A +A + + + +G NLG+ Sbjct: 144 NA----------DEAKYLAMIEHKTAALIEATAYAAAFLAGKDEKDARGFQIYGRNLGVA 193 Query: 221 FQLADDLLD 229 FQ+ DD+LD Sbjct: 194 FQIIDDVLD 202 >gi|300741252|ref|ZP_07071273.1| polyprenyl synthetase [Rothia dentocariosa M567] gi|300380437|gb|EFJ76999.1| polyprenyl synthetase [Rothia dentocariosa M567] Length = 380 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 62/275 (22%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLGGKKIRSFLV 58 ++ G+ S+ + + ++ + + Q + + +D L L AI GGK++R+ L Sbjct: 10 LSDGVKSEQEAYLRAVEATMSEFFAQQRTLLTAISHDALPLLEAIESLSSGGKRLRALLS 69 Query: 59 ------TECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111 S+ + T + R GAA+E +LIHDD+ +D RRGKP+VH ++ Sbjct: 70 YWGWRGAGGESILERSAPTPIIRAGAALELFQSAALIHDDI--IDRSDTRRGKPSVHKKF 127 Query: 112 DE----------------VTAIIAGNGLLTYAFEIISS------PKTQLK---DNIRSQL 146 + IIAG+ L+++ ++ SS T+ + D +R+++ Sbjct: 128 ETQHIQNSWVGDTFNYGLTGGIIAGDLCLSWSEQMFSSIGEGALSGTEARNIFDTMRTEV 187 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACE-----SGA 197 M GQ LD+ E I E + ++ ++CE GA Sbjct: 188 M-------------AGQYLDVLSEVIPAETPENALARAHRVIQYKSAKYSCEHPLVLGGA 234 Query: 198 I----MAHASQNEKERLRCFGENLGIIFQLADDLL 228 + +AH E+ R FG LG FQL DD L Sbjct: 235 LALTAIAHQDHPILEKYRAFGLPLGEGFQLRDDEL 269 >gi|156540259|ref|XP_001602352.1| PREDICTED: similar to CG31005-PA [Nasonia vitripennis] Length = 426 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 20/206 (9%) Query: 33 TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-----LTALRVGAAI-ECIHCYS 86 T H + A Y GK +R + A N + L + R A I E IH S Sbjct: 128 TSHEELRTIATYYFGGQGKALRPMVAILMARAINYDKDQSGLLASQRQVAMISEMIHNAS 187 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+HDD+ +D RRGKP+V+ + + +AG+ +L A +I+ + Q D Sbjct: 188 LVHDDV--VDQSDFRRGKPSVNALWSQKKVTMAGDFILAVASMMIA--RLQNDD------ 237 Query: 147 MLSLTHNIGLQGMLGGQMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHAS 203 ++LT + + ++ G+ + + E +E + K KT +L+ + ++ A++ A Sbjct: 238 -VTLTLSQVITDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANSAKAVAMLGGAD 296 Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229 + E +G N+G+ FQL DDLLD Sbjct: 297 ERLAELAFQYGRNIGLAFQLVDDLLD 322 >gi|309812865|ref|ZP_07706597.1| polyprenyl synthetase [Dermacoccus sp. Ellin185] gi|308433143|gb|EFP57043.1| polyprenyl synthetase [Dermacoccus sp. Ellin185] Length = 364 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 35/222 (15%) Query: 35 HNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 D +L A+ L GGK++R SFL + + +R A++E +L+HDD+ Sbjct: 35 QTDLMLDAVATLLRGGKRVRASFLYWGYRAAGGADSDALVRCAASMELFQAAALLHDDV- 93 Query: 94 SMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 MD RRG P H ++ E AI+AG+ LT+A E+ ++ Sbjct: 94 -MDASDTRRGMPAAHRAMAAAHRSRGLDGDADRFGEAGAILAGDLCLTWADEMYATSGLP 152 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES-- 195 + R + + L ++GGQ LD+ + + ++++ AL +S Sbjct: 153 ADEVARGRAVFDLMRTQ----LMGGQFLDVLEASTPWATMGTPERIER-ALRVIRFKSAK 207 Query: 196 ---------GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA A AS + + L +G LG +QL DDLL Sbjct: 208 YTMEHPLLIGAASAGASPHVTQALSQYGLALGEAYQLRDDLL 249 >gi|256395788|ref|YP_003117352.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928] gi|256362014|gb|ACU75511.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928] Length = 338 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 43/199 (21%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R + + + A+E +H +SL+HDD+ MDN +RR +P Sbjct: 53 GGKALRPAMALLSGRAAGADMARVVPAAVAVEFVHAFSLLHDDV--MDNDRMRRHRPA-- 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG---------- 158 A+ + P L + L + + G G Sbjct: 109 ------------------AWTVFGVPAAILAGDALLALAEEVLLDRGTTGAHRAARHIAA 150 Query: 159 ----MLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 ++ GQ LD+ D +DE V + K T AL +C GA++A A Sbjct: 151 TTRKLIAGQALDLGFETRTDVSLDECTVMSMDK--TAALFACSCSIGAVLAEAPNRLALA 208 Query: 210 LRCFGENLGIIFQLADDLL 228 L FGE+LG+ FQL DDLL Sbjct: 209 LSGFGEDLGLAFQLVDDLL 227 >gi|288220|emb|CAA79955.1| geranylgeranyl pyrophosphate synthetase [Myxococcus xanthus] Length = 361 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 25/238 (10%) Query: 7 SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 + LQ ++T L +L L + + + L A Y L K++R LV L Sbjct: 20 AWLQLVQTEVETSLAELFELPDEAGLDVRWTQALTQARAYTLRPAKRLRPALVMAGHCLA 79 Query: 66 NVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----QYDEVTAI 117 + + R A +E +H + LIHDD+ D +RRG P +H + E A+ Sbjct: 80 RGSAVVPSGLWRFAAGLELLHTFLLIHDDV--ADQAELRRGAPPLHRMLAPGRAGEDLAV 137 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-MLGGQMLDIQDEFIDETQ 176 + G+ L A E++ + + + +G+ G GQ LD+ + Sbjct: 138 VVGDHLFARALEVMLGSGLTCVAGV-------VQYYLGVSGHTAAGQYLDLDLGRAPLAE 190 Query: 177 VFMIQKMKTGAL------MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 V + Q ++ L C A++ AS E L G ++G+ +QL DDLL Sbjct: 191 VTLFQTLRVAHLKTARYGFCAPLVCAAMLGGASSGLVEELERVGRHVGLAYQLRDDLL 248 >gi|302336784|ref|YP_003801990.1| polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293] gi|301633969|gb|ADK79396.1| Polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293] Length = 356 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 27/200 (13%) Query: 50 GKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK IR LV+ A L AL +GAA+E LIHDD+ MD +RRG+ TVH Sbjct: 48 GKMIRGSLVSLGAGLVAGEAPPAALPLGAAMELFQSALLIHDDI--MDRDTMRRGQSTVH 105 Query: 109 IQY---------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 Y E I AG+ + AF +++ + L +L+ + Sbjct: 106 HYYALEAAKYGTDDAAHLGESLGICAGDVAIFLAFSLVN--EAGLIAGNHHELVGLFSRE 163 Query: 154 IGLQGMLGGQMLDI--QDEFIDE--TQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKE 208 + + G QM D+ D + D +V + + KTG +GA++A A + ++ Sbjct: 164 MSIVGT--AQMSDVAWSDGWGDPNLAEVISLYRYKTGRYTFSLPLSAGALIAGADRRFRD 221 Query: 209 RLRCFGENLGIIFQLADDLL 228 L +GE LGI+FQ+ DD L Sbjct: 222 LLEEYGELLGILFQIRDDEL 241 >gi|15790986|ref|NP_280810.1| putative isopentenyl pyrophosphate isomerase [Halobacterium sp. NRC-1] gi|169236734|ref|YP_001689934.1| multifunctional long-chain (E)-prenyl diphosphate synthase [Halobacterium salinarum R1] gi|10581569|gb|AAG20290.1| putative isopentenyl pyrophosphate isomerase [Halobacterium sp. NRC-1] gi|167727800|emb|CAP14588.1| putative multifunctional long-chain (E)-prenyl diphosphate synthase [Halobacterium salinarum R1] Length = 300 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 35/208 (16%) Query: 47 LLGGKKIRSFLV------------TECASLFNVNHLTALRVGA--------AIECIHCYS 86 L GGK++R L T A V AL G +E +H S Sbjct: 36 LAGGKRVRPTLTVLVCEAAGGAVWTGAAEAAAVRENAALSAGGEDALDYAVGVELVHNAS 95 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQ 145 L+ DD+ +D +RRG + +Y I+A +GLL AF + S P+ Sbjct: 96 LVVDDI--IDRSELRRGSASAWAEYGYGPGIVASDGLLGEAFALFSRDPRA--------- 144 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 M +T ++ G G+ +++ E + + + KTGAL A E GAI A A Sbjct: 145 -MECVTDSLVELGE--GEAIELVARPETEREYMELARRKTGALFRAAAELGAIAADADGR 201 Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233 ER + E +G+ FQ+ DD+LD D Sbjct: 202 AVERFGEYAERVGVAFQIRDDVLDATAD 229 >gi|315108190|gb|EFT80166.1| polyprenyl synthetase [Propionibacterium acnes HL030PA2] Length = 365 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 44/223 (19%) Query: 39 LLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +L A R GGK++R + A+ + L+ A++E +H +L+HDDL M Sbjct: 43 VLDAARDYTAGGKRLRPAFCYWGHAAAADQPIEPTGLLQAAASLEFLHVSALVHDDL--M 100 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNG----------------LLTYAFEIISSPK---- 135 D+ RRG P+VH +++ I G+G LL ++ ++ +S Sbjct: 101 DHSDTRRGLPSVHRRFEAAHGIAHGDGPAEQFGCDIAILLGDLLLMWSSQMFTSAPVKAD 160 Query: 136 -----TQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 T L D +R+++ +L +T G+ G LD+ V + + K Sbjct: 161 RLAAATPLLDAMRTEVTCGQVLDVTSQSGMAGSDSESALDL---------VGRVVEYKCA 211 Query: 187 ALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + C+ G +A S ++ + FG +G FQ DDLL Sbjct: 212 SYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRDDLL 254 >gi|257052502|ref|YP_003130335.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940] gi|256691265|gb|ACV11602.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940] Length = 280 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 19/187 (10%) Query: 47 LLGGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 L GGK++R S LV E A+ +E +H SL+ DD+ +D RR Sbjct: 36 LAGGKRVRPTVSLLVCEA---VGAEPEDAVDFAVGVELVHNASLVVDDI--IDESDRRRD 90 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 P+ + A+IA +GL+ AF + S+ + ++ S+ M+ L + Sbjct: 91 SPSAWSAFGHGPALIASDGLIGEAFALFSTDERAMR--AVSEAMVELGEG---EATELAA 145 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 M D +D + + + KTGAL A E GAI A A E + E +GI FQ+ Sbjct: 146 MPDSEDAY------RQLARRKTGALFRAAAELGAIAADADARTVEAFGQYAEQVGIAFQI 199 Query: 224 ADDLLDC 230 DD+LD Sbjct: 200 RDDVLDA 206 >gi|302867155|ref|YP_003835792.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] gi|302570014|gb|ADL46216.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] Length = 347 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 10/198 (5%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GK +R+ L F L +E H LIHDD+ D RRG Sbjct: 46 YPRRWGKGLRAALCLATCRAFGGGDAVGLNAAVTVELFHNAFLIHDDI--QDESEQRRGG 103 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM----LSLTHNIGLQGML 160 T+H +Y A+ GN A +++ + L I +L L + H++ Q + Sbjct: 104 RTLHAEYGVGVALNVGNMTNLLALRRLAANRAALGSGIAWRLFTETELMMRHSLEGQAIE 163 Query: 161 GGQMLD-IQDEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLG 218 G + D + D +D + + KT C + C +G ++A +N + L +G LG Sbjct: 164 IGWIRDNVCD--LDADDYYRMCLKKTSWYTCIYPCRTGILVATGRENAVDVLDRYGWYLG 221 Query: 219 IIFQLADDLLDCEEDLPK 236 FQ+ DD L+ D + Sbjct: 222 AAFQIQDDALNLTGDYAR 239 >gi|289426213|ref|ZP_06427959.1| polyprenyl synthetase [Propionibacterium acnes SK187] gi|289426856|ref|ZP_06428582.1| polyprenyl synthetase [Propionibacterium acnes J165] gi|295130308|ref|YP_003580971.1| polyprenyl synthetase [Propionibacterium acnes SK137] gi|289153378|gb|EFD02093.1| polyprenyl synthetase [Propionibacterium acnes SK187] gi|289159945|gb|EFD08123.1| polyprenyl synthetase [Propionibacterium acnes J165] gi|291376896|gb|ADE00751.1| polyprenyl synthetase [Propionibacterium acnes SK137] gi|313764760|gb|EFS36124.1| polyprenyl synthetase [Propionibacterium acnes HL013PA1] gi|313772490|gb|EFS38456.1| polyprenyl synthetase [Propionibacterium acnes HL074PA1] gi|313791810|gb|EFS39921.1| polyprenyl synthetase [Propionibacterium acnes HL110PA1] gi|313802103|gb|EFS43335.1| polyprenyl synthetase [Propionibacterium acnes HL110PA2] gi|313807220|gb|EFS45707.1| polyprenyl synthetase [Propionibacterium acnes HL087PA2] gi|313809725|gb|EFS47446.1| polyprenyl synthetase [Propionibacterium acnes HL083PA1] gi|313813232|gb|EFS50946.1| polyprenyl synthetase [Propionibacterium acnes HL025PA1] gi|313815825|gb|EFS53539.1| polyprenyl synthetase [Propionibacterium acnes HL059PA1] gi|313818266|gb|EFS55980.1| polyprenyl synthetase [Propionibacterium acnes HL046PA2] gi|313820028|gb|EFS57742.1| polyprenyl synthetase [Propionibacterium acnes HL036PA1] gi|313823163|gb|EFS60877.1| polyprenyl synthetase [Propionibacterium acnes HL036PA2] gi|313825560|gb|EFS63274.1| polyprenyl synthetase [Propionibacterium acnes HL063PA1] gi|313827798|gb|EFS65512.1| polyprenyl synthetase [Propionibacterium acnes HL063PA2] gi|313830635|gb|EFS68349.1| polyprenyl synthetase [Propionibacterium acnes HL007PA1] gi|313833855|gb|EFS71569.1| polyprenyl synthetase [Propionibacterium acnes HL056PA1] gi|313838435|gb|EFS76149.1| polyprenyl synthetase [Propionibacterium acnes HL086PA1] gi|314915252|gb|EFS79083.1| polyprenyl synthetase [Propionibacterium acnes HL005PA4] gi|314918519|gb|EFS82350.1| polyprenyl synthetase [Propionibacterium acnes HL050PA1] gi|314919783|gb|EFS83614.1| polyprenyl synthetase [Propionibacterium acnes HL050PA3] gi|314925515|gb|EFS89346.1| polyprenyl synthetase [Propionibacterium acnes HL036PA3] gi|314931797|gb|EFS95628.1| polyprenyl synthetase [Propionibacterium acnes HL067PA1] gi|314956056|gb|EFT00454.1| polyprenyl synthetase [Propionibacterium acnes HL027PA1] gi|314958462|gb|EFT02565.1| polyprenyl synthetase [Propionibacterium acnes HL002PA1] gi|314960299|gb|EFT04401.1| polyprenyl synthetase [Propionibacterium acnes HL002PA2] gi|314963108|gb|EFT07208.1| polyprenyl synthetase [Propionibacterium acnes HL082PA1] gi|314968056|gb|EFT12155.1| polyprenyl synthetase [Propionibacterium acnes HL037PA1] gi|314973637|gb|EFT17733.1| polyprenyl synthetase [Propionibacterium acnes HL053PA1] gi|314976230|gb|EFT20325.1| polyprenyl synthetase [Propionibacterium acnes HL045PA1] gi|314978163|gb|EFT22257.1| polyprenyl synthetase [Propionibacterium acnes HL072PA2] gi|314983561|gb|EFT27653.1| polyprenyl synthetase [Propionibacterium acnes HL005PA1] gi|314987750|gb|EFT31841.1| polyprenyl synthetase [Propionibacterium acnes HL005PA2] gi|314990228|gb|EFT34319.1| polyprenyl synthetase [Propionibacterium acnes HL005PA3] gi|315077572|gb|EFT49630.1| polyprenyl synthetase [Propionibacterium acnes HL053PA2] gi|315080356|gb|EFT52332.1| polyprenyl synthetase [Propionibacterium acnes HL078PA1] gi|315084615|gb|EFT56591.1| polyprenyl synthetase [Propionibacterium acnes HL027PA2] gi|315085951|gb|EFT57927.1| polyprenyl synthetase [Propionibacterium acnes HL002PA3] gi|315088631|gb|EFT60607.1| polyprenyl synthetase [Propionibacterium acnes HL072PA1] gi|315096382|gb|EFT68358.1| polyprenyl synthetase [Propionibacterium acnes HL038PA1] gi|315098240|gb|EFT70216.1| polyprenyl synthetase [Propionibacterium acnes HL059PA2] gi|315101070|gb|EFT73046.1| polyprenyl synthetase [Propionibacterium acnes HL046PA1] gi|327325893|gb|EGE67683.1| putative polyprenyl synthetase [Propionibacterium acnes HL096PA2] gi|327330588|gb|EGE72334.1| putative polyprenyl synthetase [Propionibacterium acnes HL097PA1] gi|327332234|gb|EGE73971.1| putative polyprenyl synthetase [Propionibacterium acnes HL096PA3] gi|327442612|gb|EGE89266.1| polyprenyl synthetase [Propionibacterium acnes HL013PA2] gi|327445334|gb|EGE91988.1| polyprenyl synthetase [Propionibacterium acnes HL043PA2] gi|327447790|gb|EGE94444.1| polyprenyl synthetase [Propionibacterium acnes HL043PA1] gi|327451078|gb|EGE97732.1| polyprenyl synthetase [Propionibacterium acnes HL087PA3] gi|327452840|gb|EGE99494.1| polyprenyl synthetase [Propionibacterium acnes HL092PA1] gi|327453567|gb|EGF00222.1| polyprenyl synthetase [Propionibacterium acnes HL083PA2] gi|328753112|gb|EGF66728.1| polyprenyl synthetase [Propionibacterium acnes HL087PA1] gi|328753766|gb|EGF67382.1| polyprenyl synthetase [Propionibacterium acnes HL020PA1] gi|328759144|gb|EGF72760.1| polyprenyl synthetase [Propionibacterium acnes HL025PA2] gi|328760374|gb|EGF73943.1| putative polyprenyl synthetase [Propionibacterium acnes HL099PA1] gi|332675150|gb|AEE71966.1| bifunctional short chain isoprenyl diphosphate synthase [Propionibacterium acnes 266] Length = 365 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 44/223 (19%) Query: 39 LLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +L A R GGK++R + A+ + L+ A++E +H +L+HDDL M Sbjct: 43 VLDAARDYTAGGKRLRPAFCYWGHAAAADQPIEPTGLLQAAASLEFLHVSALVHDDL--M 100 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNG----------------LLTYAFEIISSPK---- 135 D+ RRG P+VH +++ I G+G LL ++ ++ +S Sbjct: 101 DHSDTRRGLPSVHRRFEAAHGIAHGDGPAEQFGCDIAILLGDLLLMWSSQMFTSAPVKAD 160 Query: 136 -----TQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 T L D +R+++ +L +T G+ G LD+ V + + K Sbjct: 161 RLAAATPLLDAMRTEVTCGQVLDVTSQSGMAGSDSESALDL---------VGRVVEYKCA 211 Query: 187 ALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + C+ G +A S ++ + FG +G FQ DDLL Sbjct: 212 SYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRDDLL 254 >gi|111018984|ref|YP_701956.1| polyprenyl synthetase [Rhodococcus jostii RHA1] gi|110818514|gb|ABG93798.1| polyprenyl synthetase [Rhodococcus jostii RHA1] Length = 346 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 18/188 (9%) Query: 41 SAIRYALLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +A+ A GGK+ R A L + + + +E +H +L HDD+ MD Sbjct: 58 AALHLAKAGGKRFRPLFTVLTAQLGPKASDPSVVTAATVVELVHLATLYHDDV--MDEAS 115 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQ--LKDNIRSQLMLSLTHNIG 155 +RRG P+ + ++ AI+AG+ L +A ++S+ P+ + + + + IG Sbjct: 116 MRRGAPSANSRWGNSVAILAGDYLFAHASRLVSTLGPEAVRIIAETFAELVTGQMRETIG 175 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 L+G QD + KTG+L+ G + A + +RL G+ Sbjct: 176 LRGE--------QDPV---EHYLKVVWEKTGSLIAACGRFGGTFSGADADHVKRLERLGD 224 Query: 216 NLGIIFQL 223 +G FQ+ Sbjct: 225 AVGTAFQI 232 >gi|229891678|sp|P0C9E1|TPRT_ASFWA RecName: Full=Trans-prenyltransferase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; AltName: Full=Polyprenyl-diphosphate synthase Length = 318 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 36/242 (14%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 P + S+ +TIL++ + +L YAL GGK IR ++ E Sbjct: 46 PKNYKTFSEEFETILNNAI------EDGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99 Query: 66 NVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + H + A+E H SLI DD+PS DN RR K TV ++ A ++ Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159 Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171 L F+ I P+ + + + L ++H++ G GQ++D ++ Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPEKT 217 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I F I + L + E ++ A+ CFG FQLADD+ D + Sbjct: 218 I---PFFKIAFIMGWVLGTGSVEDIGMIERAAH-------CFGN----AFQLADDIKDHD 263 Query: 232 ED 233 D Sbjct: 264 TD 265 >gi|113474063|ref|YP_720124.1| trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101] gi|110165111|gb|ABG49651.1| Trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101] Length = 323 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%) Query: 48 LGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 + GK+IR L++ L R+ E IH SL+HDD+ +D IRRG Sbjct: 43 VKGKRIRPAIVLLISRTTMLTQEITPKHRRLAEITEMIHTASLVHDDI--VDESEIRRGV 100 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 PTVH + A++AG+ L + +++ + S++++ L QG+ Sbjct: 101 PTVHSLFTNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSKVIMDLAEGEIQQGLHRFNT 160 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D+ E E + KT +L+ + ++ AI++ + + +G +G+ FQ+ Sbjct: 161 -DLSIEAYLEKSYY-----KTSSLIANSSKAAAIISDVPPEIVQDMYYYGRYIGLAFQIV 214 Query: 225 DDLLD 229 DD+LD Sbjct: 215 DDILD 219 >gi|237786435|ref|YP_002907140.1| putative polyprenyl diphosphate synthase [Corynebacterium kroppenstedtii DSM 44385] gi|237759347|gb|ACR18597.1| putative polyprenyl diphosphate synthase [Corynebacterium kroppenstedtii DSM 44385] Length = 355 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 19/193 (9%) Query: 46 ALLGGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 AL GGK++R + L + + + ++ +E H +L HDD+ MD RR Sbjct: 73 ALAGGKRVRPMFALLASRYGERPGCDDV--IKAAIVVEMTHLATLYHDDV--MDEAEKRR 128 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G + + +++ AI+AG+ +L+ A +++S + + ++ G Sbjct: 129 GADSANFRWNNSVAILAGDFILSAASRLMASLGVKTVKHFSE----------AFGDLVTG 178 Query: 163 QMLD-IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 QM + I DE + ++ + KT L+ A GA+ A ++ L FGE+LG++ Sbjct: 179 QMRETIGATSGDEIEHYLNVIHEKTAVLIRSAGFLGAMHAGTPAPIQQALATFGEHLGMV 238 Query: 221 FQLADDLLDCEED 233 FQ+ DD++D D Sbjct: 239 FQIVDDMIDIFSD 251 >gi|290955133|ref|YP_003486315.1| geranylgeranyl pyrophosphate synthase [Streptomyces scabiei 87.22] gi|260644659|emb|CBG67744.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces scabiei 87.22] Length = 452 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 31/210 (14%) Query: 44 RYALLGGKKIRS----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 R+AL GGK +R + + C ALRVGAA+E I +L+HDD+ MD Sbjct: 108 RFALDGGKLMRPRFVWWALRACGG-GAAETEAALRVGAALELIQTCALVHDDV--MDASR 164 Query: 100 IRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 +RRG+ +H ++ E AI+AG+ L +A +I+++ T + Sbjct: 165 LRRGRLALHADIAAQYAGGTAPADGARFGEAAAILAGDLALAWADDIVAATLTTPDTDRA 224 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMA 200 + + S+ M+ GQ LDIQ + + +K+ + Sbjct: 225 VRELWSVMRTE----MVAGQYLDIQGQATSSRSLARAIRAACLKSALYSVERPLALGAAL 280 Query: 201 HASQNEKERLRC-FGENLGIIFQLADDLLD 229 + + R C G +GI FQL DDL D Sbjct: 281 AGADAARTRALCSAGRCVGIAFQLRDDLGD 310 >gi|260942339|ref|XP_002615468.1| hypothetical protein CLUG_04350 [Clavispora lusitaniae ATCC 42720] gi|238850758|gb|EEQ40222.1| hypothetical protein CLUG_04350 [Clavispora lusitaniae ATCC 42720] Length = 535 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 44/198 (22%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132 R+ +E IH SL+HDD+ +D RRG+P+ +I + A++AG+ LL A IS Sbjct: 236 RLAEIVEMIHTASLLHDDV--IDLSDARRGRPSGNIAFTNKMAVLAGDFLLGRASVAISR 293 Query: 133 --SPKT-----------------QLKDNIRS-----------QLMLSLT---------HN 153 +P+ QLK+ + + +++ + T ++ Sbjct: 294 LRNPEVVELISTSIANLVEGEFMQLKNTVLTDDKTVNNDGDEKVVPTPTGKVPVEQHEYS 353 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLR 211 + G G D +D + + K +KT +LM + S A+++ A N + Sbjct: 354 VASPGQSGENGQVSHDTNVDAAFEYYLHKTYLKTASLMSKSARSAAVLSGARDNVVDSCY 413 Query: 212 CFGENLGIIFQLADDLLD 229 FG NLG+ FQ+ DD+LD Sbjct: 414 DFGRNLGLCFQIVDDMLD 431 >gi|317969726|ref|ZP_07971116.1| solanesyl diphosphate synthase [Synechococcus sp. CB0205] Length = 323 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 11/184 (5%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +V + +L LT+ R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLISRALAPQGELTSRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +++ A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDNLEVVKLLSRVIMDLADGEVKQGLYRYDTG 161 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +++++ KT +L+ + + +++ +++ + L FG LG+ FQ+ D Sbjct: 162 QSFETYLEKSYC------KTASLIANSARAAGVLSGLPEDQLDCLYRFGRQLGLAFQVVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|121603663|ref|YP_980992.1| trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans CJ2] gi|120592632|gb|ABM36071.1| Trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans CJ2] Length = 327 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 92/186 (49%), Gaps = 8/186 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 48 GGKRLRPALVLLMCGALDYRGAQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRSTAN 105 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ ++ D Q + T+ I +L Q++++ Sbjct: 106 EIFGNPASVLVGDFLYSRAFQMM----VEVGDMRIMQTLAEATNVIAEGEVL--QLMNMH 159 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + KT L + A++A +S ++ +G+ LG FQ+ DD+L Sbjct: 160 DAGLTEAGYLRVIRSKTAKLFEASARLAALLAQSSPAVEQHCAEYGQALGTAFQVIDDVL 219 Query: 229 DCEEDL 234 D + ++ Sbjct: 220 DYDGEV 225 >gi|81997099|sp|Q8V9T7|TPRT_ASFM2 RecName: Full=Trans-prenyltransferase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; AltName: Full=Polyprenyl-diphosphate synthase gi|16905412|gb|AAL31326.1|L00966_9 polyprenyl synthetase [African swine fever virus] Length = 318 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 36/242 (14%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 P + S+ +TIL++ + +L YAL GGK IR ++ E Sbjct: 46 PKNYKTFSEEFETILNNAI------EDGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99 Query: 66 NVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + H + A+E H SLI DD+PS DN RR K TV ++ A ++ Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159 Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171 L F+ I P+ + + + L ++H++ G GQ++D ++ Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPEKT 217 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I F I + L E ++ A+ CFG FQLADD+ D + Sbjct: 218 I---PFFKIAFIMGWVLGTGTIEDIGVIERAAH-------CFGN----AFQLADDIKDHD 263 Query: 232 ED 233 D Sbjct: 264 TD 265 >gi|269926570|ref|YP_003323193.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269790230|gb|ACZ42371.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 345 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H ++L+HDD+ D+ RR +P++ A+ AG+G+ + ++ S L+ Sbjct: 91 LHNFTLVHDDIE--DHSPSRRHRPSLWKLIGVPLALNAGDGMFVISHMVLQS---MLELG 145 Query: 142 IRSQLMLSLTHNIGLQGMLG---GQMLDIQDEFIDETQV----FMIQKMKTGALMCFACE 194 + +Q +L+ Q L GQ +D+ E +E + MI + KTGALM +C Sbjct: 146 VPAQTVLAAIDKFD-QAALSVCEGQHMDLMFEAREEVSLQEYLAMISR-KTGALMGLSCY 203 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 GA++A + E+ R FGENLG+ +Q+ DD+ Sbjct: 204 LGALVAGKDECVLEQYRHFGENLGLAYQIRDDI 236 >gi|254520331|ref|ZP_05132387.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. 7_2_43FAA] gi|226914080|gb|EEH99281.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. 7_2_43FAA] Length = 321 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 16/187 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R V S F N ++ A IE +H +L+HDD+ +D+ +RRG+ T+ Sbjct: 44 GGKLLRPAFVL-IGSKFGTNDTEKSIPTAAVIEMLHMATLVHDDV--IDDSKLRRGRETI 100 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--- 164 +Y + A+ G+ L F+I+++ + + S+ M + +G L + Sbjct: 101 QSKYGKDYAVYIGDYLFCVCFKILATSASLQAIKVDSRAMSKIC--MGEVNQLNSRFSMK 158 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 L ++D +++ KT L + GA +A + L G NLG+ FQ+ Sbjct: 159 LSVKD-YLNRIS------GKTAELFSISLYLGAAECNADDKVSKELGKIGHNLGMAFQII 211 Query: 225 DDLLDCE 231 DD+LD E Sbjct: 212 DDILDYE 218 >gi|119094186|gb|ABL61008.1| geranylgeranyl pyrophosphate synthase CrtE [uncultured marine bacterium HF10_25F10] Length = 341 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 5/120 (4%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72 SK I+ D +L+ M +A+ + GK +R+ + A L V+ A Sbjct: 22 SKSTSEIIHDFILE---RMPAPGQTLADAAMHHFAAPGKMLRAKMALRAADLLKVDRPAA 78 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L AAIE +H SL+HDD+ D +RRG+P V ++ A+ G+ L+ +FE+ + Sbjct: 79 LHWAAAIEVLHNASLVHDDI--CDGDQLRRGRPAVWSKFGRDVALTLGDWLIALSFELAA 136 >gi|298707167|emb|CBJ29940.1| solanesyl diphosphate synthase-like protein [Ectocarpus siliculosus] Length = 479 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 16/161 (9%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++G E IH SLIHDD+ +D +RRG VH Y A++AG+ LL A +++ Sbjct: 226 QLGQITEMIHVASLIHDDV--LDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLA- 282 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMC 190 +L D ++M + L ++ G+++ ++ ++ +D + KT +L+ Sbjct: 283 ---RLGDVQVVEIMAT-----ALDSLVQGEIMQLKMDPEKLLDISLYLRKSYYKTASLIT 334 Query: 191 FACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLD 229 AC+S AI+ + +G ++G+ FQ+ DD+LD Sbjct: 335 NACKSCAILGGHEFDSDVATAAEEYGYHMGLAFQIVDDILD 375 >gi|212276250|ref|NP_001130771.1| hypothetical protein LOC100191875 [Zea mays] gi|194690074|gb|ACF79121.1| unknown [Zea mays] gi|238009334|gb|ACR35702.1| unknown [Zea mays] Length = 245 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 14/151 (9%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH SLIHDD+ +D+ +RRGK T+H Y A++AG+ + + ++ N Sbjct: 2 IHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------N 51 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI 198 + + ++ L + ++ G++ F I + KT +L+ + +S +I Sbjct: 52 LENIEVIKLISQV-IKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTKSASI 110 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + S E++ +G NLG+ FQ+ DD+LD Sbjct: 111 FSGVSTTICEKMYAYGRNLGLSFQVVDDILD 141 >gi|297171910|gb|ADI22897.1| geranylgeranyl pyrophosphate synthase [uncultured Rhizobium sp. HF0500_35F13] Length = 563 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 11/200 (5%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 A+ AL GG+ + T A L + TA+ +IE H SL+HDD D+ R Sbjct: 251 AVYDALTGGQATMAEGATFLAELPDSIRRTAM----SIETFHKASLVHDD--IEDDDDFR 304 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--MLSLTHNIGLQGM 159 G PT+H ++ TAI G+ L+ + +S+ QL + + ML+ H +G Sbjct: 305 YGDPTMHRRFGIPTAINVGDYLIGMGYRFVSNEAPQLGAAAAADILDMLARAHTRLSEGQ 364 Query: 160 LGGQML--DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 G +++ D D+ + I +KT A +G +A +E +R F NL Sbjct: 365 -GAELMWRDALDKRLAPIDALKIYALKTAPAFEAAVLAGVRLARTVAEIEEPVRGFARNL 423 Query: 218 GIIFQLADDLLDCEEDLPKK 237 G+ FQ+ +DL D + D K Sbjct: 424 GVAFQILNDLGDWKGDADNK 443 >gi|54023707|ref|YP_117949.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152] gi|54015215|dbj|BAD56585.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica IFM 10152] Length = 383 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 37/212 (17%) Query: 45 YALLGGKKIR-SFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + L GGK+ R +F T S L AA+E + +L+HDD+ +D+ Sbjct: 68 FVLRGGKRTRPAFAWTGWLGAGGSPTAPEADAVLTACAALELVQACALVHDDI--IDSSR 125 Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 RR PTVH+ +++ AI+ G+ L +A +++ + R Sbjct: 126 TRRRFPTVHVDFEQRHRERGWTGDPAHFGVSVAILIGDLALAWADDMVHASGLDAAAIGR 185 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACES----G 196 + +L +LGGQ+LDI E + V I + KT A + E G Sbjct: 186 FAPVWALMRT----EVLGGQLLDINGEAGRDDSVEAALRINRYKTAA---YTVERPLHLG 238 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A +A A R FG ++G+ FQL DDLL Sbjct: 239 AAIADADAELVAAYRTFGTDIGVAFQLRDDLL 270 >gi|255718931|ref|XP_002555746.1| KLTH0G16368p [Lachancea thermotolerans] gi|238937130|emb|CAR25309.1| KLTH0G16368p [Lachancea thermotolerans] Length = 470 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 43/195 (22%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL---TYAFEI 130 R+ +E IH SL+HDD+ +D+ RRG+ + ++ + A++AG+ LL T + Sbjct: 175 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRASGNVAFTNKMAVLAGDFLLGRATVSISR 232 Query: 131 ISSPKT-----------------QLKDNI-----------------RSQLMLSLTHNIGL 156 + +P+ QLK+ S + + TH+ + Sbjct: 233 LRNPEVVELISNSIANLVEGEFMQLKNTAVDSDLTTVANGTQKIPPPSPKLTNPTHDYRV 292 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G Q+ ID + + K +KT +L+ +C + AI++ A + + FG Sbjct: 293 PVERGAVF--SQEIVIDTAFDYYLHKTYLKTASLISKSCRAAAILSGAQETVVDECYNFG 350 Query: 215 ENLGIIFQLADDLLD 229 +NLGI FQL DD+LD Sbjct: 351 KNLGICFQLVDDMLD 365 >gi|41410156|ref|NP_962992.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398989|gb|AAS06608.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 335 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 + +++ RI+ ++D L++A + T+ L A GGK+ R A + Sbjct: 20 ATVRDGVGRIEQLMD-TELRSADDIMTESLTHLFKA------GGKRFRPLFTVLSAQIGP 72 Query: 67 VNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + + GA IE +H +L HDD+ MD +RRG PT ++++ AI+AG+ L Sbjct: 73 DPDAAEVTIAGAVIELVHLATLYHDDV--MDEAEVRRGTPTANVRWGNNVAILAGDYLFA 130 Query: 126 YAFEIIS--SPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM- 179 A ++S P+ +L +QL+ GQM + + + D + ++ Sbjct: 131 TASRLVSRLGPEAVRLIAETFAQLVT-------------GQMRETRGRKQGSDPIEHYLK 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + KT L+ A GA+ + A ++ ERL G +G FQ++DD Sbjct: 178 VVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDD 224 >gi|300113550|ref|YP_003760125.1| polyprenyl synthetase [Nitrosococcus watsonii C-113] gi|299539487|gb|ADJ27804.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113] Length = 339 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 78/188 (41%), Gaps = 18/188 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IR LV +L AIECI SLIHDD +D IRR +P Sbjct: 51 GKRIRGCLVFLMNQTQEGKPEDSLPRAVAIECIQAASLIHDDY--LDEDVIRRKRPATWT 108 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 A++ G+ + +A I S + +D ++ H I Q L Q Sbjct: 109 IEGPRRAVLLGD--IMFATAIQSMAELSKEDGA------TVAHAIATVANGAYQELFWQT 160 Query: 170 EFIDETQVFMIQK--------MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + +++K +KTGAL AC+ GAI A A Q FG G + Sbjct: 161 KTGKSRAHKLLEKDLYEHIIYLKTGALFGAACQLGAIAAGAHQEVSALAYAFGARTGEAY 220 Query: 222 QLADDLLD 229 Q+ADDL D Sbjct: 221 QIADDLED 228 >gi|330448814|ref|ZP_08312461.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328493005|dbj|GAA06958.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 323 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + A +E IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPMLAVLAARALGYDGEKHTTAAAFVEFIHTATLLHDDV--VDESDMRRGKETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L + + AI+A A + + +G LG FQL DD+L Sbjct: 155 DPDTTEDSYMQVIYSKTARLFEASTQIAAIIADAPAEIELAFQEYGRYLGTAFQLIDDVL 214 Query: 229 D 229 D Sbjct: 215 D 215 >gi|326203183|ref|ZP_08193049.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] gi|325986829|gb|EGD47659.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] Length = 318 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 15/201 (7%) Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T N L+ AI + GGK++R +V + + +++ +AIE +H +L+HDD Sbjct: 24 TSKNQLLVKAIADTVGAGGKRLRPAMVIASSYFGKIRQDRLIKLASAIELLHTATLVHDD 83 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D RR + TV+ +Y AI G+ L T A +++ +I L++ Sbjct: 84 V--LDYSPFRRNRETVYKKYGTDMAIYCGDFLYTKALLMLA--------DIVPAKHLTIA 133 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALMCFACESGAIMAHASQNEKE 208 ++ + G++ +D+++ V K KT L +C GA+ A + + Sbjct: 134 AK-AVKTICEGEVDQYRDKYVMNLSVPSYLKRISRKTAVLFGASCALGALCAKCNHSITN 192 Query: 209 RLRCFGENLGIIFQLADDLLD 229 L G G++FQ+ DD D Sbjct: 193 SLSKLGFYYGVMFQMIDDYRD 213 >gi|16801110|ref|NP_471378.1| hypothetical protein lin2044 [Listeria innocua Clip11262] gi|16414545|emb|CAC97274.1| lin2044 [Listeria innocua Clip11262] Length = 321 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ G AIE IH S++HDD+ + +RRG+ T+ Sbjct: 44 GGKRIRPMFVCLSARLSPDADFEAVKNAGVAIELIHMASIVHDDVVDDAD--LRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYKKLYRFGYYVGMAFQIT 212 Query: 225 DDLLD 229 DD+LD Sbjct: 213 DDVLD 217 >gi|313623140|gb|EFR93406.1| heptaprenyl diphosphate synthase component II [Listeria innocua FSL J1-023] Length = 321 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ G AIE IH S++HDD+ + +RRG+ T+ Sbjct: 44 GGKRIRPMFVCLSARLSPNADFEAVKNAGVAIELIHMASIVHDDVVDDAD--LRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYKKLYRFGYYVGMAFQIT 212 Query: 225 DDLLD 229 DD+LD Sbjct: 213 DDVLD 217 >gi|311900885|dbj|BAJ33293.1| putative polyprenyl diphosphate synthase [Kitasatospora setae KM-6054] Length = 351 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 21/201 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L+ E A+L + L A ++E +H + L+HDDL +D+ +RRG P+ Sbjct: 62 GGKRLRVALLHEAAALVTAGPVPGLDAAALSVELLHTHGLVHDDL--IDDAPLRRGGPST 119 Query: 108 HIQY--------DEVTA--IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 + Y D A ++AG+ A ++ P + + + Sbjct: 120 YYAYLAEFPDRPDTARALTVLAGDLAAFLAVRVLLGPGGPPPERALAMAAVVADAGAAAV 179 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM----KTGALMCFACESGAIMAHASQNEKER-LRC 212 G Q+LD++ +F + ++ TG + G + A A +R LR Sbjct: 180 GG---QLLDLERDFPPLPDTAFLHEVTAYKSTGYSVLAPLRLGLLAAGADPAPYDRELRG 236 Query: 213 FGENLGIIFQLADDLLDCEED 233 + E +G+ Q+ DDLLD D Sbjct: 237 YAEAVGVANQIHDDLLDLFGD 257 >gi|313618146|gb|EFR90238.1| heptaprenyl diphosphate synthase component II [Listeria innocua FSL S4-378] Length = 321 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ G AIE IH S++HDD+ + +RRG+ T+ Sbjct: 44 GGKRIRPMFVCLSARLSPDADFEAVKNAGVAIELIHMASIVHDDVVDDAD--LRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYKKLYRFGYYVGMAFQIT 212 Query: 225 DDLLD 229 DD+LD Sbjct: 213 DDVLD 217 >gi|224372814|ref|YP_002607186.1| prenyl transferase [Nautilia profundicola AmH] gi|223589295|gb|ACM93031.1| prenyl transferase [Nautilia profundicola AmH] Length = 287 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 21/185 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR L+T + + N A ++ A +E IH SL+HDD+ +D RRG +++ Sbjct: 23 GKGIRGKLIT----IIDPN---AQKLAAVVESIHLASLLHDDV--IDEADTRRGAASINA 73 Query: 110 QYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 +Y + TA++ G+ + + AF E+I K K + +LS QG L L Sbjct: 74 KYGDHTAVMLGDIVYSRAFYELIDFGKDIAKTVSNAVYLLS-------QGELEDVKLSNS 126 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + MI K KT +L+ AC +GAI A +N + +G+N+GI FQ+ DDLL Sbjct: 127 INLDKDKYMQMIYK-KTASLIEAACAAGAISAGLDRN---KFATYGKNIGIAFQIIDDLL 182 Query: 229 DCEED 233 D +D Sbjct: 183 DITQD 187 >gi|210631749|ref|ZP_03296991.1| hypothetical protein COLSTE_00876 [Collinsella stercoris DSM 13279] gi|210159869|gb|EEA90840.1| hypothetical protein COLSTE_00876 [Collinsella stercoris DSM 13279] Length = 346 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A AL G AIE +LIHDD+ D +RRG+P ++ Sbjct: 60 GGKRVRPVLALLGAEAVGGCAEQALSSGVAIELFQSAALIHDDI--ADASELRRGEPCLY 117 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQML 165 + E AI AG+ LT FE++ + + D + +L+ H + Q + G Sbjct: 118 RTHGEGLAINAGDLALTRVFEVVLNDASLPGDRRLRVLDELVRMERHTLEGQALDLGWAR 177 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + + ++MI+ + GA+ A A+ L G G+ FQL D Sbjct: 178 DGRWDVTSSDYLYMIEGKTAWYTVASPLRIGALAAGAADEAACELVELGRPAGLAFQLQD 237 Query: 226 DLLD 229 DLL+ Sbjct: 238 DLLN 241 >gi|146417731|ref|XP_001484833.1| hypothetical protein PGUG_02562 [Meyerozyma guilliermondii ATCC 6260] Length = 475 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 38/192 (19%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF----- 128 R+ +E IH SL+HDD+ M + RRG+P+ ++ + A++AG+ LL A Sbjct: 182 RLAEIVEMIHTASLLHDDVIDMSDA--RRGRPSGNVAFTNKMAVLAGDFLLGRASVAIAR 239 Query: 129 ----EIISSPKTQLKDNIRSQLM------LSLTHNIGLQGMLG------GQMLDIQDEF- 171 E+I T + + + + M L+ + +I G L G++ Q E+ Sbjct: 240 LRNPEVIELLSTTIANLVEGEFMQLKNTVLNQSSDINNGGELKPVPTPTGKVPTKQHEYS 299 Query: 172 ------ID-ETQV-----FMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 +D ET V + + K +KT +LM + A+++ A + + FG NL Sbjct: 300 VQTPADVDHETNVNAAFEYYLHKTYLKTASLMSKLARAAAVLSGAQDDVVQNCYDFGRNL 359 Query: 218 GIIFQLADDLLD 229 G+ FQ+ DD+LD Sbjct: 360 GLCFQIVDDMLD 371 >gi|227892929|ref|ZP_04010734.1| trans-hexaprenyltranstransferase [Lactobacillus ultunensis DSM 16047] gi|227865267|gb|EEJ72688.1| trans-hexaprenyltranstransferase [Lactobacillus ultunensis DSM 16047] Length = 326 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 19/229 (8%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 SK EN I L+++ ++T H + ++ A GGK +R L+ A Sbjct: 4 SKPWENYPLIANELEEVNDFIQKTIKTPHKSLQAALLQMADNGGKYLRPSLLLLAAHAVG 63 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + +++ ++IE +H +LIHDD+ + RRG ++ + + A+ G+ L T Sbjct: 64 KTNERTIKLASSIEILHMATLIHDDIIDDSDE--RRGNVSIQAAFGKDVAVYTGDLLFTD 121 Query: 127 AFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLG--GQMLDIQ---DEFIDETQVFMI 180 F+++ + + +R +Q M + L G LG + +++ D+++ + Sbjct: 122 FFDLMLDAIDEHEYLVRNAQTMRKI-----LNGELGQMAERFNLKQTLDDYLRDV----- 171 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K KT AL A E GA A A+ + + L FGENLGI FQ+ DD+LD Sbjct: 172 -KGKTAALFRLAAEEGAHFAGANSMQSDALAQFGENLGIAFQMVDDILD 219 >gi|268679951|ref|YP_003304382.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268617982|gb|ACZ12347.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 298 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 99/195 (50%), Gaps = 44/195 (22%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R+ L+ + A + +L++ A +E IH SL+HDD+ +D+ + RRG+ +++ Sbjct: 31 GKRLRAKLILKIAGVSE----ASLKLAAIVELIHAASLLHDDV--IDDAFTRRGESSINA 84 Query: 110 QYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + TAI+ G+ L + F E+ P+ ++ ++++ + L + G++LD+ Sbjct: 85 LFGNKTAIMLGDILYSKGFSELTHMPQ---------EVAFTISNAVALLSV--GELLDVD 133 Query: 169 -----DEFIDETQVFMIQKMKTGALM--------CFACESGAIMAHASQNEKERLRCFGE 215 +E ET F + KT +L+ + ++G I A +G+ Sbjct: 134 LSHGFNE--SETLYFDMIYKKTASLIEASAKAAALLSGKNGDIYA-----------LYGK 180 Query: 216 NLGIIFQLADDLLDC 230 NLG+ FQ+ DD+LD Sbjct: 181 NLGLAFQIIDDILDI 195 >gi|308197999|ref|XP_001386769.2| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS) [Scheffersomyces stipitis CBS 6054] gi|149388806|gb|EAZ62746.2| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS) [Pichia stipitis CBS 6054] Length = 465 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 41/194 (21%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL---TYAFEI 130 R+ +E IH SL+HDD+ + + RRG+P+ +I + A++AG+ LL + A Sbjct: 171 RLAEIVEMIHTASLLHDDVIDLSDS--RRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 228 Query: 131 ISSPKT-----------------QLKDNIRSQLMLSLTHNIGLQGMLG---GQMLDIQDE 170 + +P+ QLK+ + S S+ N G + ++ G++ Q E Sbjct: 229 LRNPEVIELLSTTIANLVEGEFMQLKNTVMSNDSQSIV-NDGEKKVIPEPTGKVPTKQHE 287 Query: 171 F-------------IDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + +D + + K +KT +LM + + A+++ A + E FG Sbjct: 288 YSVSTPAEVDHITNVDAAFEYYLHKTYLKTASLMSKSSRAAAVLSGAHDDIIENCYEFGR 347 Query: 216 NLGIIFQLADDLLD 229 NLG+ FQ+ DD+LD Sbjct: 348 NLGLCFQIVDDMLD 361 >gi|118618810|ref|YP_907142.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium ulcerans Agy99] gi|118570920|gb|ABL05671.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium ulcerans Agy99] Length = 340 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 47/178 (26%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTY 126 H ++LIHDD+ +D RRG+P HI Q+ AI+ G+ + Sbjct: 65 HAWALIHDDV--IDASSTRRGRPMAHIHFAALHRDRNWLGPAQQFGISAAILIGDVAQAW 122 Query: 127 AFEIIS-------SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174 A +IIS SP Q + +IR+++ LGGQ LDI E Sbjct: 123 ADDIISRVSQSSLSPDAQRRVQRVWSDIRTEV-------------LGGQYLDIVAEASAA 169 Query: 175 TQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + T C+ GA A + +E FG +LG+ FQL DD+L Sbjct: 170 DSITSAMTVATFKTACYTVSRPLQLGAAAAADRPDVQEAFHQFGTDLGVAFQLRDDVL 227 >gi|302525469|ref|ZP_07277811.1| geranylgeranyl pyrophosphate synthase [Streptomyces sp. AA4] gi|302434364|gb|EFL06180.1| geranylgeranyl pyrophosphate synthase [Streptomyces sp. AA4] Length = 375 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 31/209 (14%) Query: 45 YALLGGKKIR---SFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + L GGK+IR ++ A L AL+ A++E I +LIHDDL +D+ Sbjct: 58 FVLGGGKRIRPTFAWWGWRGAGGAASGPLAEGALQAVASLELIQACALIHDDL--IDSSD 115 Query: 100 IRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 RRG+PTVH+ +++ +A++ G+ L +A ++ + + Sbjct: 116 SRRGRPTVHVAAEKLHAGRGWLGSPSVFGLASAVLVGDLALAWADDMFAEAPLPAETIAA 175 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMC-FACESGAIM 199 ++ +L GQ LD++ + + + I ++KT A GA + Sbjct: 176 ARPAWRAMRTE----VLAGQYLDVRTQAVGDASPEAALRIDRLKTAAYTVQRPLHLGASL 231 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228 A A + L FG ++G+ FQL DDLL Sbjct: 232 AGADEQLIATLLEFGGDVGVAFQLRDDLL 260 >gi|49259554|pdb|1VG2|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima A76y Mutant Length = 299 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H YSL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLYSLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N +L + + IG M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|108797750|ref|YP_637947.1| trans-hexaprenyltranstransferase [Mycobacterium sp. MCS] gi|108768169|gb|ABG06891.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. MCS] Length = 335 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 16/182 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A L + V GA IE +H +L HDD+ MD +RRG P+ Sbjct: 55 GGKRFRPLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSA 112 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ L A ++S + I +T GQM + Sbjct: 113 NARWGNNIAILAGDYLFATASRLVSRLGPEAVRIIADTFAQLVT----------GQMRET 162 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + E +DE + ++ + KT L+ + GA + A + + ERL G +G FQ++ Sbjct: 163 RGAVEGVDEIEHYLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQIS 222 Query: 225 DD 226 DD Sbjct: 223 DD 224 >gi|225436206|ref|XP_002268229.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 321 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 8/150 (5%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG +++I A++AG+ LL+ A ++S K Sbjct: 70 EMIHVASLLHDDV--LDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALASLKNT-- 125 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + S L + H + + M QM ++ + KT +L+ +C++ A++ Sbjct: 126 -EVVSLLATVVEHLVTGETM---QMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIALL 181 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + +G+NLG+ FQL DD+LD Sbjct: 182 AGQTAEVSMLAFEYGKNLGLAFQLIDDVLD 211 >gi|126433376|ref|YP_001069067.1| trans-hexaprenyltranstransferase [Mycobacterium sp. JLS] gi|126233176|gb|ABN96576.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. JLS] Length = 325 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 16/182 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A L + V GA IE +H +L HDD+ MD +RRG P+ Sbjct: 45 GGKRFRPLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSA 102 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ L A ++S + I +T GQM + Sbjct: 103 NARWGNNIAILAGDYLFATASRLVSRLGPEAVRIIADTFAQLVT----------GQMRET 152 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + E +DE + ++ + KT L+ + GA + A + + ERL G +G FQ++ Sbjct: 153 RGAVEGVDEIEHYLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQIS 212 Query: 225 DD 226 DD Sbjct: 213 DD 214 >gi|119866839|ref|YP_936791.1| trans-hexaprenyltranstransferase [Mycobacterium sp. KMS] gi|119692928|gb|ABL90001.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. KMS] Length = 342 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 16/182 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A L + V GA IE +H +L HDD+ MD +RRG P+ Sbjct: 62 GGKRFRPLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSA 119 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ L A ++S + I +T GQM + Sbjct: 120 NARWGNNIAILAGDYLFATASRLVSRLGPEAVRIIADTFAQLVT----------GQMRET 169 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + E +DE + ++ + KT L+ + GA + A + + ERL G +G FQ++ Sbjct: 170 RGAVEGVDEIEHYLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQIS 229 Query: 225 DD 226 DD Sbjct: 230 DD 231 >gi|25011822|ref|NP_736217.1| polyprenyl synthetase family protein [Streptococcus agalactiae NEM316] gi|77413688|ref|ZP_00789872.1| polyprenyl synthetase family protein [Streptococcus agalactiae 515] gi|24413363|emb|CAD47442.1| Unknown [Streptococcus agalactiae NEM316] gi|77160288|gb|EAO71415.1| polyprenyl synthetase family protein [Streptococcus agalactiae 515] Length = 326 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 32/199 (16%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +L ++ + N + ++ A++E +H +LIHDD+ +D+ +RRG Sbjct: 44 GGKQLRPAFFYLFSQLGNKENQDTQQLKKIAASLEILHVATLIHDDV--IDDSPLRRGNM 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII-----SSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 T+ ++ + A+ G+ L T F++I +P ++ N +S ++ +L Sbjct: 102 TIQSKFGKDIAVYTGDLLFTVFFDLILESMADTPFMRI--NAKS-----------MRKIL 148 Query: 161 GGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGE-- 215 G++ + + + + + KT L A + GA A EKE +R G Sbjct: 149 MGELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGGA---EKEVVRLAGHIG 205 Query: 216 -NLGIIFQLADDLLDCEED 233 N+G+ FQ+ DD+LD D Sbjct: 206 FNIGMTFQILDDILDYTAD 224 >gi|291449814|ref|ZP_06589204.1| LOW QUALITY PROTEIN: polyprenyl diphosphate synthase [Streptomyces albus J1074] gi|291352763|gb|EFE79665.1| LOW QUALITY PROTEIN: polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 209 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 10/128 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + TAL A+E +H +SL+HDD+ MD +RR +P V Sbjct: 82 GGKGLRQALAVLSAEAVGASGTTALPAAVAVELVHTFSLLHDDI--MDGDPLRRRRPAVW 139 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 Y A++AG+ L A + ++ +P + +R LS T L ++ GQ D+ Sbjct: 140 RAYGVGPAVLAGDALHALAVQTLAEAPGERAPAAVRH---LSRT----LTALVRGQADDL 192 Query: 168 QDEFIDET 175 + E + T Sbjct: 193 RFEELPWT 200 >gi|229891677|sp|P0C9E0|TPRT_ASFP4 RecName: Full=Trans-prenyltransferase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; AltName: Full=Polyprenyl-diphosphate synthase Length = 318 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 36/242 (14%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 P + S+ +TIL++ + +L YAL GGK IR ++ E Sbjct: 46 PKNYKTFSEEFETILNNAI------EDGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99 Query: 66 NVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + H + A+E H SLI DD+PS DN RR K TV ++ A ++ Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159 Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171 L F+ I P+ + + + L ++H++ G GQ++D ++ Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPEKT 217 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I F I + L E ++ A+ CFG FQLADD+ D + Sbjct: 218 I---PFFKIAFIMGWVLGTGTIEDIGMIERAAH-------CFGN----AFQLADDIKDHD 263 Query: 232 ED 233 D Sbjct: 264 TD 265 >gi|114049915|emb|CAK50932.1| putative polyprenyl synthetase [Streptomyces ambofaciens] gi|114050137|emb|CAK51170.1| putative polyprenyl synthetase [Streptomyces ambofaciens] Length = 362 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 29/247 (11%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-----AIRYALLGGKKIRSFLVT 59 +P + + ++R +T + + A + R +L GGK++R ++ Sbjct: 11 IPERFADCARRFNTRFEQYFRELADSFDAPPSSRFTPECLDLLRDLSLRGGKRLRVAMLY 70 Query: 60 ECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---- 114 E A L + + L A +E + + L+HDD+ +D+G +RRG P+ + Y E Sbjct: 71 EAARLVTPDPVPGLEEAALGVELLQTHGLVHDDI--IDDGPVRRGGPSTYYAYREQFPDR 128 Query: 115 ------TAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 A++AG+ L + + + SP + R ++ L + M+ GQ+ DI Sbjct: 129 PQDALGLAVLAGDLALVLSLRVLLDSPAPP---SARHAMVGVL--SAAASAMIAGQITDI 183 Query: 168 QDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQ 222 + +F E + + KT A ++A + LR + +GI Sbjct: 184 ERDFTHLPSEELLHAVSDYKTAHYSILAPVQLGLLAAGEDPARFDAELRRYARLVGIYET 243 Query: 223 LADDLLD 229 + DD LD Sbjct: 244 MRDDYLD 250 >gi|239977900|ref|ZP_04700424.1| putative polyprenyl diphosphate synthase [Streptomyces albus J1074] Length = 312 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 10/128 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + TAL A+E +H +SL+HDD+ MD +RR +P V Sbjct: 82 GGKGLRQALAVLSAEAVGASGTTALPAAVAVELVHTFSLLHDDI--MDGDPLRRRRPAVW 139 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 Y A++AG+ L A + ++ +P + +R LS T L ++ GQ D+ Sbjct: 140 RAYGVGPAVLAGDALHALAVQTLAEAPGERAPAAVR---HLSRT----LTALVRGQADDL 192 Query: 168 QDEFIDET 175 + E + T Sbjct: 193 RFEELPWT 200 >gi|284037886|ref|YP_003387816.1| trans-hexaprenyltranstransferase [Spirosoma linguale DSM 74] gi|283817179|gb|ADB39017.1| Trans-hexaprenyltranstransferase [Spirosoma linguale DSM 74] Length = 324 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 12/182 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R V A + R + IE +H +L+HDD+ +D RRG +++ Sbjct: 46 GKQLRPMFVFLMAGVCGSITEATYRGASLIELLHTATLVHDDV--VDESNYRRGFFSINA 103 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDI 167 + A++ G+ LL+ ++ S D +R S + L+ LQ + + LDI Sbjct: 104 LWKNKVAVLVGDYLLSRG--LLLSVDNNDFDLLRIVSTAVRELSEGELLQ-LYKARRLDI 160 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 ++ E I + KT +L+ C GA A E+ FGE +GI FQ+ DDL Sbjct: 161 TEDIYYE-----IIRQKTASLIAACCAVGARSAGIDPQVVEKAHAFGEKVGIAFQIKDDL 215 Query: 228 LD 229 D Sbjct: 216 FD 217 >gi|11465734|ref|NP_053878.1| prenyl transferase [Porphyra purpurea] gi|1709766|sp|P51268|PREA_PORPU RecName: Full=Prenyl transferase gi|1276734|gb|AAC08154.1| prenyl transferase [Porphyra purpurea] Length = 323 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 21/210 (10%) Query: 33 TQHNDRLLSAIRYALL----------GGKKIRS---FLVTECASLFNVNHLTALRVGAAI 79 +HN + ++ R+ +L GGK++R LV + S R+ Sbjct: 18 VEHNLKSVAGTRHPILYAAAKHLFEAGGKRLRPAIVLLVAKSTSEQQEIKPGQRRLAEIT 77 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D RRG+ TVH ++ A++AG+ L + +++ Sbjct: 78 EIIHTASLVHDDV--IDECSTRRGEKTVHKLFNTKIAVLAGDFLFAQSSWYLANIGNLEV 135 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + ++++ QG++ D++I+++ KT +L+ +C A++ Sbjct: 136 VKVITKVITDFAEGEIRQGLVHFDPSISIDDYIEKSF------YKTASLVAASCRGAAML 189 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 + L +G+++G+ FQ+ DD+LD Sbjct: 190 NDLNSQMHNDLYLYGKHMGLAFQIMDDVLD 219 >gi|156086492|ref|XP_001610655.1| polyprenyl synthetase superfamily protein [Babesia bovis T2Bo] gi|154797908|gb|EDO07087.1| polyprenyl synthetase superfamily protein [Babesia bovis] Length = 457 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 22/167 (13%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 LR+ + E +H SL+HDD+ +D+ +RR P VH++ A++ G+ +LT A + Sbjct: 194 VLRLLQSYEIVHIGSLMHDDV--LDSANLRRRMPAVHVKAGVKIAVLVGDLMLTRACSTV 251 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK-----TG 186 + N+ SQ+ L++ + L+ ++ G++ + E D + M +K T Sbjct: 252 A--------NLGSQV-LTVRMSKALENLIKGEITTV--EGTDNVESMMCNYLKKTFLKTA 300 Query: 187 ALMCFACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLDCE 231 +L+ C S I + Q+E +C+ G ++G+ FQ+ DDLLD E Sbjct: 301 SLIAECCAS--IASLLRQDEITCHKCYLLGLHVGMAFQIYDDLLDYE 345 >gi|145346108|ref|XP_001417536.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577763|gb|ABO95829.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 332 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 8/156 (5%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RRG ++++ AI+AG+ LL A ++S Sbjct: 75 RLAEIAEMIHVASLLHDDV--LDNAATRRGLRALNLEVGNKLAILAGDFLLARASVTLAS 132 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + + S+++ L +Q + L D ++ +T KT +L+ + Sbjct: 133 LRNTEVIELLSRVLEHLVAGEVMQMTAKPESLSSMDHYVKKTY------YKTASLIANSS 186 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ A++ + + +G+NLG+ FQ DD+LD Sbjct: 187 KAIALLGGHGEESAQLAYDYGKNLGLAFQFQDDVLD 222 >gi|255535323|ref|YP_003095694.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium 3519-10] gi|255341519|gb|ACU07632.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium 3519-10] Length = 325 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 16/211 (7%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L + + Q N LL + ++ GK++R V CA L R + IE Sbjct: 18 LFEQKFYESMQSNVPLLDKVTRFIVTTKGKQMRPMFVFLCAKLVGSVTDKTFRGASMIEL 77 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH +L+HDD+ +D + RR +++ + A++ G+ LL+ A ++S+ D+ Sbjct: 78 IHTATLVHDDV--VDESFKRRNFFSINALWKNKIAVLVGDYLLSKAV-LLST------DH 128 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI 198 L+ ++ I + M G++L ++ I E + I + KT L+ CE G Sbjct: 129 KDYDLLAVISRTI--REMAEGELLQLEKARKLDITEEVYYEIIRQKTATLIAACCEIGVR 186 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + ++ FG G+ FQ+ DDL D Sbjct: 187 SNSDDEVLAAKMMEFGTLTGMAFQIKDDLFD 217 >gi|156839045|ref|XP_001643218.1| hypothetical protein Kpol_457p11 [Vanderwaltozyma polyspora DSM 70294] gi|156113818|gb|EDO15360.1| hypothetical protein Kpol_457p11 [Vanderwaltozyma polyspora DSM 70294] Length = 332 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 28/223 (12%) Query: 24 LLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82 L++ + + D + S Y A GK RS LV + ++ L + + + Sbjct: 7 LVEGKPIWSSDYEDIVQSPYNYLAQQPGKNFRSLLVKTFNQFYGLDEEQILLIDKLVGIL 66 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDN 141 H SL+ DD+ DN IRRG T H++Y I + N + A E++ K +KD+ Sbjct: 67 HTASLLIDDIE--DNSVIRRGMETAHLKYGIPMTINSANYMYFKAMEVLQDISKLHIKDS 124 Query: 142 IRSQLMLSLTHNIGLQGML-----------GGQMLDI--QDEF----IDETQVFMIQKMK 184 + + HN+ L+ ++ GQ LDI +D F DE F + K Sbjct: 125 PQ------IDHNVLLKELMIIFNEELINLHRGQALDIYWRDTFPEIIPDEDMYFNMVMNK 178 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 TG L A + S++ K L LGI++Q+ DDL Sbjct: 179 TGGLFRLAVRIMETLNGNSKDSKS-LVPLANLLGILYQVRDDL 220 >gi|22537877|ref|NP_688728.1| polyprenyl synthetase family protein [Streptococcus agalactiae 2603V/R] gi|76799379|ref|ZP_00781535.1| polyprenyl synthetase family protein [Streptococcus agalactiae 18RS21] gi|77408798|ref|ZP_00785527.1| polyprenyl synthetase family protein [Streptococcus agalactiae COH1] gi|22534773|gb|AAN00601.1|AE014270_19 polyprenyl synthetase family protein [Streptococcus agalactiae 2603V/R] gi|76585273|gb|EAO61875.1| polyprenyl synthetase family protein [Streptococcus agalactiae 18RS21] gi|77172579|gb|EAO75719.1| polyprenyl synthetase family protein [Streptococcus agalactiae COH1] Length = 326 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 28/197 (14%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +L ++ + N + ++ A++E +H +LIHDD+ +D+ +RRG Sbjct: 44 GGKQLRPAFFYLFSQLGNKENQDTQQLKKIAASLEILHVATLIHDDV--IDDSPLRRGNM 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGG 162 T+ ++ + A+ G+ L T F++I S T ++ N +S ++ +L G Sbjct: 102 TIQSKFGKDIAVYTGDLLFTVFFDLILESMADTPFMRINAKS-----------MRKILMG 150 Query: 163 QMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGE---N 216 ++ + + + + + KT L A + GA A EKE +R G N Sbjct: 151 ELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGGA---EKEVVRLAGHIGFN 207 Query: 217 LGIIFQLADDLLDCEED 233 +G+ FQ+ DD+LD D Sbjct: 208 IGMTFQILDDILDYTAD 224 >gi|168700708|ref|ZP_02732985.1| polyprenyl synthetase [Gemmata obscuriglobus UQM 2246] Length = 599 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 22/210 (10%) Query: 42 AIRYALL--GGKKIRSFLVTEC--------ASLFN-----VNHLTALRVGAAIECIHCYS 86 AI Y L GGK+ R F+ A+L + +H+ R AIE H S Sbjct: 272 AIAYDFLARGGKRSRPFITLAAYDALKGAPATLADSGWELPDHVK--RAAVAIEAFHKAS 329 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+HDD+ D+ Y R G T+H Y TAI G+ L+ ++ +S + L + + + Sbjct: 330 LVHDDIED-DDAY-RYGAETLHRTYGVGTAINVGDYLIGVGYKCVSRDRKALGAEVAADV 387 Query: 147 MLSLTH-NIGLQGMLGGQML--DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 + L +I L G ++L + +D+ + I +KT A +G +A + Sbjct: 388 LDKLADAHIKLSEGQGAELLWREAKDKSLTTLDALKIYALKTSPAFEAALYTGVRLAGEA 447 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ + F N+G+ FQ+ +D+ D D Sbjct: 448 TAYEKLIADFSRNVGVAFQILNDIKDWTGD 477 >gi|77405958|ref|ZP_00783037.1| polyprenyl synthetase family protein [Streptococcus agalactiae H36B] gi|77411623|ref|ZP_00787964.1| polyprenyl synthetase family protein [Streptococcus agalactiae CJB111] gi|77162340|gb|EAO73310.1| polyprenyl synthetase family protein [Streptococcus agalactiae CJB111] gi|77175410|gb|EAO78200.1| polyprenyl synthetase family protein [Streptococcus agalactiae H36B] Length = 326 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 22/194 (11%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +L ++ + N + ++ A++E +H +LIHDD+ +D+ +RRG Sbjct: 44 GGKQLRPAFFYLFSQLGNKENQDTQQLKKIAASLEILHVATLIHDDV--IDDSPLRRGNM 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++ + A+ G+ L T F++I L+ + M + ++ +L G++ Sbjct: 102 TIQSKFGKDIAVYTGDLLFTVFFDLI------LESMADTPFMT--INAKSMRKILMGELD 153 Query: 166 DIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGI 219 + + + + + KT L A + GA A EKE +R G N+G+ Sbjct: 154 QMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGGA---EKEVVRLAGHIGFNIGM 210 Query: 220 IFQLADDLLDCEED 233 FQ+ DD+LD D Sbjct: 211 TFQILDDILDYTAD 224 >gi|58699102|ref|ZP_00373935.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534385|gb|EAL58551.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila ananassae] Length = 120 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 GGQ LDI +F ++ I MKT L +CE GAI+ A+ ++ L FG NLG+I Sbjct: 1 GGQALDIDTDF---NKIKEIHLMKTAKLFAASCEIGAIIGGATDEQRRALYNFGINLGLI 57 Query: 221 FQLADDLLDCEED 233 FQ DD+ D E+D Sbjct: 58 FQAKDDIEDYEQD 70 >gi|296090181|emb|CBI40000.3| unnamed protein product [Vitis vinifera] Length = 422 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 8/150 (5%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG +++I A++AG+ LL+ A ++S K Sbjct: 171 EMIHVASLLHDDV--LDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALASLKNT-- 226 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + S L + H + + M QM ++ + KT +L+ +C++ A++ Sbjct: 227 -EVVSLLATVVEHLVTGETM---QMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIALL 282 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + +G+NLG+ FQL DD+LD Sbjct: 283 AGQTAEVSMLAFEYGKNLGLAFQLIDDVLD 312 >gi|254430804|ref|ZP_05044507.1| solanesyl diphosphate synthase [Cyanobium sp. PCC 7001] gi|197625257|gb|EDY37816.1| solanesyl diphosphate synthase [Cyanobium sp. PCC 7001] Length = 323 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 19/188 (10%) Query: 49 GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +V + + LT R+ E IH SL+HDD+ +D RRG Sbjct: 44 GGKRLRPGIVLLLSRAVAPDGELTPRHRRLAEITEMIHTASLVHDDV--VDEAATRRGVD 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TVH +++ A++AG+ L A +++ + S++++ L QG+ Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLFR---- 157 Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 D TQ F ++K KT +L+ + + +++ + L FG LG+ F Sbjct: 158 ------YDTTQSFETYLEKSYCKTASLIANSARAAGVLSGLPAPRLDDLYRFGRQLGLAF 211 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 212 QVVDDILD 219 >gi|190346389|gb|EDK38464.2| hypothetical protein PGUG_02562 [Meyerozyma guilliermondii ATCC 6260] Length = 475 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 38/192 (19%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF----- 128 R+ +E IH SL+HDD+ M + RRG+P+ ++ + A++AG+ LL A Sbjct: 182 RLAEIVEMIHTASLLHDDVIDMSDA--RRGRPSGNVAFTNKMAVLAGDFLLGRASVAIAR 239 Query: 129 ----EIISSPKTQLKDNIRSQLM------LSLTHNIGLQG------MLGGQMLDIQDEF- 171 E+I T + + + + M L+ + +I G G++ Q E+ Sbjct: 240 LRNPEVIELLSTTIANLVEGEFMQLKNTVLNQSSDINNGGESKPVPTPTGKVPTKQHEYS 299 Query: 172 ------ID-ETQV-----FMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 +D ET V + + K +KT +LM + + A+++ A + + FG NL Sbjct: 300 VQTPADVDHETNVNAAFEYYLHKTYLKTASLMSKSARAAAVLSGAQDDVVQNCYDFGRNL 359 Query: 218 GIIFQLADDLLD 229 G+ FQ+ DD+LD Sbjct: 360 GLCFQIVDDMLD 371 >gi|164690689|dbj|BAF98639.1| geranylgeranyl diphosphate synthase [Streptomyces argenteolus] Length = 360 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 42/250 (16%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRS---FLVTEC 61 L+E + ++ +L + + Q + + + + A+R + L GGK+IR+ + Sbjct: 12 LEEVRQPVNAVLREFIEQQQNSIPPDVD--IGPAVRALGDFVLHGGKRIRAALCYWGWRG 69 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------- 110 A + + +A R AA+E HC+ LIHDD+ +D RRG+P++H Q Sbjct: 70 AGGGDEDLTSAYRAAAALEVCHCFGLIHDDI--IDGTATRRGRPSLHCQLASLHEQAGWH 127 Query: 111 -----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + +A++ G+ L +A E++++ ++ + + + L ++ + GQML Sbjct: 128 GDAAAFGRSSALLMGDLCLFWADELLTTACSEER-----LVEVRLEYSGMRVAEVCGQML 182 Query: 166 DI---QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLG 218 ++ D + + KT +A E G +A +S ++ FG LG Sbjct: 183 EMIVQASRDFDVSSGMTVAHYKTAK---YATERPLQIGGRLAGSSAELRKSYAAFGLPLG 239 Query: 219 IIFQLADDLL 228 FQL DD+L Sbjct: 240 EAFQLRDDIL 249 >gi|91786742|ref|YP_547694.1| trans-hexaprenyltranstransferase [Polaromonas sp. JS666] gi|91695967|gb|ABE42796.1| Trans-hexaprenyltranstransferase [Polaromonas sp. JS666] Length = 327 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 90/186 (48%), Gaps = 8/186 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 48 GGKRLRPALLLLMCGALGYRGDQRYNLAAVVEFIHTATLLHDDV--VDESTLRRGRATAN 105 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ ++R L+ N+ +G + Q++++ Sbjct: 106 EAFGNPASVLVGDFLYSRAFQMMVE-----AGDMRVMQTLAEATNVIAEGEVL-QLMNMH 159 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + + KT L + A++A + ++ +G+ LG FQ+ DD+L Sbjct: 160 DATLSEDGYLRVIRSKTAKLFEASARLAALLAQSPPPVEQSCADYGQALGTAFQVIDDVL 219 Query: 229 DCEEDL 234 D + D+ Sbjct: 220 DYDGDV 225 >gi|189500392|ref|YP_001959862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1] gi|189495833|gb|ACE04381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1] Length = 324 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 19/200 (9%) Query: 43 IRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 +RY L GK+IR LV A + R E +H +LIHDD+ +D +R Sbjct: 36 VRYILKQQGKQIRPLLVMLGAKVCGGVEEKTYRAAIMAELLHSATLIHDDV--VDGAEMR 93 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYA--FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RG +++ + +++ G+ +L+ F + DN + L L + + ++ M Sbjct: 94 RGIASINAVWKNKISVLIGDYMLSKGLLFSL---------DN-KDYLFLHMV-STAVRRM 142 Query: 160 LGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 G++L IQ I E + KT +L+ + GA + + L+ +GE Sbjct: 143 SEGEILQIQKTRSLDITEEDYLRVISDKTASLLSTSSAMGAASVTDDEVKINALKSYGEY 202 Query: 217 LGIIFQLADDLLDCEEDLPK 236 LG+ FQ+ DDLLD D K Sbjct: 203 LGLAFQIRDDLLDYTGDSKK 222 >gi|158338022|ref|YP_001519198.1| trans-octaprenyltranstransferase [Acaryochloris marina MBIC11017] gi|158308263|gb|ABW29880.1| trans-octaprenyltranstransferase [Acaryochloris marina MBIC11017] Length = 323 Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 11/184 (5%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +V + +L LT R+ E IH SL+HDD+ +D+ +RRG P Sbjct: 44 GGKRMRPAIVLLLSRALLPDQDLTPRHRRLAEITEMIHTASLLHDDV--VDDSGVRRGVP 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 +VH + AI AG+ L A +++ DN+ +LS +G + Q + Sbjct: 102 SVHSLFGNRIAIQAGDFLFAQASWYLAN-----LDNLEVVKLLSEVIKDFAEGEIQ-QGI 155 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + D + KT +LM + ++ +++ S + L +G +G+ FQ+ D Sbjct: 156 NCFDTSLTLEAYLEKSYYKTASLMANSAKAAGVLSGTSLQVNQDLYAYGRCVGLAFQIVD 215 Query: 226 DLLD 229 D+LD Sbjct: 216 DILD 219 >gi|325474098|gb|EGC77286.1| polyprenyl synthetase [Treponema denticola F0402] Length = 344 Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 11/189 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R L L + A + IE H SL+HDD+ D RRG P H Sbjct: 58 GGKRWRPLLCVLSCELAEGDPEKAYPLTPLIEFCHTASLVHDDI--EDKSDTRRGAPAAH 115 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 I+Y TA+ + + L A + + + +++R+++ + N L+ + GQ +DI Sbjct: 116 IKYGLDTALNSASWLYFEALNPLIN--YEASESVRAEIYSLYSQN--LRRLHLGQSMDIG 171 Query: 168 ----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D + + +KTG+L A E G I A NE ++GI FQ+ Sbjct: 172 WHSNPDIIPSVDEYITMISLKTGSLAKLAGELGFIAAGKPINEVLEYGKLMTDMGIGFQI 231 Query: 224 ADDLLDCEE 232 DD+ + E Sbjct: 232 LDDVKNITE 240 >gi|182433853|ref|YP_001821572.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|182440870|ref|YP_001828589.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462369|dbj|BAG16889.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178469386|dbj|BAG23906.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 402 Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 29/206 (14%) Query: 45 YALLGGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 +AL GGK++R L+ + ALR+G A+E I +LI DD+ MD + RRG Sbjct: 77 FALRGGKRMRPLLLWWAMRACSGAESEAALRLGVALELIQTCALIQDDV--MDRSHTRRG 134 Query: 104 KPTVHIQYDEVTAIIAGNG----------------LLTYAFEIISSPKTQLKDNIRSQLM 147 +P VHI E + AG+G L +A + + +T L R Q+ Sbjct: 135 RPAVHIALAEQRGLAAGSGPGAAFGASAAVLAGDLALVWADDTVG--ETFLPPGRRRQVR 192 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 G M+ GQ LD++ + + +K+ AL A A Sbjct: 193 ALWRSMRGE--MIAGQYLDLRGQIGGGASAARALRTAHLKS-ALYSVERPVALGAALAGA 249 Query: 205 NE--KERLRCFGENLGIIFQLADDLL 228 +E + LR G+ FQL DDLL Sbjct: 250 DEWTTDALRSASRYAGMAFQLRDDLL 275 >gi|332297374|ref|YP_004439296.1| Polyprenyl synthetase [Treponema brennaborense DSM 12168] gi|332180477|gb|AEE16165.1| Polyprenyl synthetase [Treponema brennaborense DSM 12168] Length = 348 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 13/164 (7%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + +E +H SLIHDD+ D RRG P HI + TAI AG+ L A + Sbjct: 85 AYEITPLVEFVHTASLIHDDI--EDCADTRRGMPAAHITWGIDTAINAGSWLYFTAAACL 142 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ------KMKT 185 T + +L L + L+ + GQ +DI D T + +Q +MKT Sbjct: 143 ----TNVPLPAERKLALYRLYAEELRRLHLGQAMDIA-WHKDNTALPSVQEYEAMVRMKT 197 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 G L A ++G ++ + ++ + ++G+ FQ+ DD+L+ Sbjct: 198 GTLAALAAKAGTLVGGGTAEQESVMGNAAADIGVGFQILDDVLN 241 >gi|254293445|ref|YP_003059468.1| trans-hexaprenyltranstransferase [Hirschia baltica ATCC 49814] gi|254041976|gb|ACT58771.1| Trans-hexaprenyltranstransferase [Hirschia baltica ATCC 49814] Length = 340 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 11/185 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + A L + AA+E IH +L+HDD+ +D +RRGK Sbjct: 58 GGKRLRPLITLAAAYAAGGKGSAPLHSLAAAVEYIHTATLLHDDV--VDESDLRRGKKAA 115 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + + +I+ G+ L AF ++ ++ ++ D + + + + +G L Sbjct: 116 KMLWGNSASILVGDFLFARAFTLMVETRSLRILDILSNASCVIAEGEVKQLAAIGKADLP 175 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 I+D ++D I + KT AL A +GA+ A E + L +G LG FQL DD Sbjct: 176 IED-YMD------IVEAKTAALFEAAARAGALTVVAEGKESDGLAEYGRRLGRAFQLVDD 228 Query: 227 LLDCE 231 LD + Sbjct: 229 ALDYD 233 >gi|300709739|ref|YP_003735553.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3] gi|299123422|gb|ADJ13761.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3] Length = 280 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 15/189 (7%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 AL GGK++R + A+ G IE +H SL+ DD+ +D +RRG Sbjct: 35 ALSGGKRVRPTVTVLVCEAVGGEPDDAVGFGVGIELVHNASLVIDDI--IDRSAMRRGVE 92 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + +Y AI+ + L AF + SS P+ ++ M+ L G+ Sbjct: 93 SAWTRYGYGPAIVGSDAQLGEAFALFSSDPRAT---QAVTEAMVELGE---------GEA 140 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ E + + + KTGAL A E GAI A A E + + E +GI FQ+ Sbjct: 141 TELVARPETEAEYMELARRKTGALFRAAAELGAIAADADAVTVEAVGEYAERVGIAFQIR 200 Query: 225 DDLLDCEED 233 DD+LD D Sbjct: 201 DDVLDATAD 209 >gi|217419927|ref|ZP_03451433.1| polyprenyl synthetase [Burkholderia pseudomallei 576] gi|217397231|gb|EEC37247.1| polyprenyl synthetase [Burkholderia pseudomallei 576] Length = 363 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 25/195 (12%) Query: 50 GKKIRSFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GKKIR L+ ASLF + + A+ ++E +H +LIHDD+ +D +RR Sbjct: 60 GKKIRPLLLLLAASLFRADGARRAPLPVKAIMGAVSLEMLHVATLIHDDI--IDAAPLRR 117 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G +V AI+ G+ A + + + D ++ L ++G G Sbjct: 118 GIASVVGARGIDMAILVGDLQFIQAIRVFA----RHVDTQADMALVRLVLDVGFSLCCG- 172 Query: 163 QMLDIQDEFIDETQ--------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +I + +D + F + KT L ACE GA ++ A++ E L +G Sbjct: 173 ---EIDERSVDRRESIGFLRNHYFKVADRKTAVLFGLACEIGAALSGATKREIRALSQYG 229 Query: 215 ENLGIIFQLADDLLD 229 +LGI FQ+ DD+ D Sbjct: 230 RDLGIAFQIMDDVFD 244 >gi|291060049|gb|ADD72784.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum str. Chicago] Length = 377 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 113/263 (42%), Gaps = 48/263 (18%) Query: 2 NGGLPSKLQENSKRIDTILDDLLL--QTASHMQTQ------HNDRLLSAIRYALL--GGK 51 NG + L + + I+ L D L T S M T+ + R+L + A + GGK Sbjct: 11 NGTMKRALAQRLRNIERALADALPAQPTRSWMGTRLRVLASEDTRVLRTVCNACVSCGGK 70 Query: 52 KIRSFLVTECASLFN-----------------VNHLTALRVGAAIECIHCYSLIHDDLPS 94 + R L+ A L + ++ + A +E IH SL+HDD+ Sbjct: 71 RWRPLLLILSAELAHACVQCTHRKLQGHKRKKISEREWYTLSAVVELIHTASLLHDDIE- 129 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTH 152 D+ RRGKP +++Y + A + L +A +I S + LK + S +S T Sbjct: 130 -DHSSTRRGKPCAYLRYGTDCVLNAASWLYFHAHALIDTLSIEPALKAALFSA-TISATR 187 Query: 153 NIGLQGMLGGQMLDI----QDEFI-DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 + + GQ LDI E I Q + +KTGAL+ + E G + A S E Sbjct: 188 ALHM-----GQALDIAWHRSPELIPSRAQYLRMVALKTGALIALSGELGFLCAGYSAREA 242 Query: 208 ERLRCFGEN---LGIIFQLADDL 227 R FG +GI FQ+ DD+ Sbjct: 243 ---RSFGAQVMPIGIGFQILDDV 262 >gi|219848508|ref|YP_002462941.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485] gi|219542767|gb|ACL24505.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485] Length = 343 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 12/185 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV + + AL + A I+ +H +SLIHDD+ D+ +RRG+ T+ Sbjct: 52 GKLIRPQLVLLACTAAGGDPQQALPLAAGIQLLHDFSLIHDDI--EDDSAMRRGRRTLWH 109 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIG--LQGMLGGQMLD 166 + I AG+ + A I +L D + ++ +L++ + + GQ LD Sbjct: 110 IWGLAHGINAGDAMFVIAHLAIH----RLADVGVPAERVLAILRRFDEVILRICEGQYLD 165 Query: 167 IQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + D I + KT AL+ A E GA +A A + L FG LG+ FQ+ Sbjct: 166 LSFEGDLSITPDDYLTMIGGKTAALIAGAAELGARVAGAPEATVTALAEFGRALGLGFQI 225 Query: 224 ADDLL 228 DD+L Sbjct: 226 EDDIL 230 >gi|291518883|emb|CBK74104.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens 16/4] Length = 306 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 8/161 (4%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+ +A+E +H +L+HDD+ MD+ RRG T+ + + TA+I G+ LL A + Sbjct: 65 AVIFASAVEILHLATLVHDDI--MDDADTRRGLITLQKKAGKRTAVICGDYLLAAAINEL 122 Query: 132 SSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 S T D + S +I L + Q ++ ++ + + I KT AL Sbjct: 123 SKVVT---DEKYKKFNFSRYVESIALGEL--RQNINNRNFRLKTFRYLSIIDGKTAALFE 177 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A +GA+ A + + + R G GIIFQL DD +D E Sbjct: 178 AAYHAGALAGDADEQQIKLFRKLGRYTGIIFQLTDDCIDFE 218 >gi|134279621|ref|ZP_01766333.1| IS element protein [Burkholderia pseudomallei 305] gi|167901285|ref|ZP_02488490.1| heptaprenyl diphosphate synthase component II [Burkholderia pseudomallei NCTC 13177] gi|254181827|ref|ZP_04888424.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655] gi|134248821|gb|EBA48903.1| IS element protein [Burkholderia pseudomallei 305] gi|184212365|gb|EDU09408.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655] Length = 363 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 25/195 (12%) Query: 50 GKKIRSFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GKKIR L+ ASLF + + A+ ++E +H +LIHDD+ +D +RR Sbjct: 60 GKKIRPLLLLLAASLFRADGARRAPLPVKAIMGAVSLEMLHVATLIHDDI--IDAAPLRR 117 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G +V AI+ G+ A + + + D ++ L ++G G Sbjct: 118 GIASVVGARGIDMAILVGDLQFIQAIRVFA----RHVDTQADMALVRLVLDVGFSLCCG- 172 Query: 163 QMLDIQDEFIDETQ--------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +I + +D + F + KT L ACE GA ++ A++ E L +G Sbjct: 173 ---EIDERSVDRRESIGFLRNHYFKVADRKTAVLFGLACEIGAALSGATKREIRALSQYG 229 Query: 215 ENLGIIFQLADDLLD 229 +LGI FQ+ DD+ D Sbjct: 230 RDLGIAFQIMDDVFD 244 >gi|50842220|ref|YP_055447.1| geranylgeranyl pyrophosphate synthase [Propionibacterium acnes KPA171202] gi|282854286|ref|ZP_06263623.1| polyprenyl synthetase [Propionibacterium acnes J139] gi|50839822|gb|AAT82489.1| geranylgeranyl pyrophosphate synthase [Propionibacterium acnes KPA171202] gi|282583739|gb|EFB89119.1| polyprenyl synthetase [Propionibacterium acnes J139] gi|314923275|gb|EFS87106.1| polyprenyl synthetase [Propionibacterium acnes HL001PA1] gi|314966417|gb|EFT10516.1| polyprenyl synthetase [Propionibacterium acnes HL082PA2] gi|314980998|gb|EFT25092.1| polyprenyl synthetase [Propionibacterium acnes HL110PA3] gi|315091657|gb|EFT63633.1| polyprenyl synthetase [Propionibacterium acnes HL110PA4] gi|315093037|gb|EFT65013.1| polyprenyl synthetase [Propionibacterium acnes HL060PA1] gi|315103189|gb|EFT75165.1| polyprenyl synthetase [Propionibacterium acnes HL050PA2] gi|315107050|gb|EFT79026.1| polyprenyl synthetase [Propionibacterium acnes HL030PA1] gi|327327861|gb|EGE69637.1| putative polyprenyl synthetase [Propionibacterium acnes HL103PA1] Length = 365 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 44/223 (19%) Query: 39 LLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +L A R GGK++R + A+ L+ A++E +H +L+HDDL M Sbjct: 43 VLDAARDYTAGGKRLRPAFCYWGHAAAADQPTEPAGLLQAAASLEFLHVSALVHDDL--M 100 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNG----------------LLTYAFEIISSPK---- 135 D+ RRG P+VH ++ I G+G LL ++ ++ +S Sbjct: 101 DHSDTRRGLPSVHRHFEAAHGIAHGDGPAEQFGFDIAILLGDLLLMWSSQMFTSAPVKAD 160 Query: 136 -----TQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 T L D +R+++ +L +T G+ G LD+ V + + K Sbjct: 161 RLAAATPLLDAMRTEVTCGQVLDVTSQSGMAGSDSESALDL---------VGRVVEYKCA 211 Query: 187 ALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + C+ G +A S ++ + FG +G FQ DDLL Sbjct: 212 SYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRDDLL 254 >gi|167892795|ref|ZP_02480197.1| heptaprenyl diphosphate synthase component II [Burkholderia pseudomallei 7894] Length = 363 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 25/195 (12%) Query: 50 GKKIRSFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GKKIR L+ ASLF + + A+ ++E +H +LIHDD+ +D +RR Sbjct: 60 GKKIRPLLLLLAASLFRADGARRAPLPVKAIMGAVSLEMLHVATLIHDDI--IDAAPLRR 117 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G +V AI+ G+ A + + + D ++ L ++G G Sbjct: 118 GIASVVGARGIDMAILVGDLQFIQAIRVFA----RHVDTQADMALVRLVLDVGFSLCCG- 172 Query: 163 QMLDIQDEFIDETQ--------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +I + +D + F + KT L ACE GA ++ A++ E L +G Sbjct: 173 ---EIDERSVDRRESIGFLRNHYFKVADRKTAVLFGLACEIGAALSGATKREIRALSQYG 229 Query: 215 ENLGIIFQLADDLLD 229 +LGI FQ+ DD+ D Sbjct: 230 RDLGIAFQIMDDVFD 244 >gi|146166126|ref|XP_001015938.2| Polyprenyl synthetase family protein [Tetrahymena thermophila] gi|146145326|gb|EAR95693.2| Polyprenyl synthetase family protein [Tetrahymena thermophila SB210] Length = 424 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 21/232 (9%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVG 76 IL D LL T + + +S + LL GGK+ R L A FN+ + Sbjct: 98 ILSDNLLYTKNQNDLVSLTKAISEPVWDLLDRGGKRWRPILCIILAEAFNLGQEDVKEIA 157 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 + E +H +L+ DD+ DN +RR K VH+ Y +I AGN + I+ Sbjct: 158 SLCEIVHNGTLVVDDIE--DNSTVRRDKKCVHLIYGVDISINAGNMMYFAPLHIL----- 210 Query: 137 QLKDNI---RSQLMLSLTHNIGLQGMLGGQMLDI--------QDEFIDETQVFMIQKMKT 185 LK N + +L + + + + GQ DI + E Q + KT Sbjct: 211 -LKSNKYTDQQKLRFAKIYAEEMTQLHLGQGWDILWHNTDKLEGRIPTEQQYLQMTAHKT 269 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 G L + + S ++ + F E +G+ FQ+ DD+L+ E + KK Sbjct: 270 GVLARLSSRLICAAVNTSVEDEMTISRFSERIGVAFQIQDDILNLEGEEYKK 321 >gi|308178200|ref|YP_003917606.1| trans-hexaprenyltranstransferase [Arthrobacter arilaitensis Re117] gi|307745663|emb|CBT76635.1| trans-hexaprenyltranstransferase [Arthrobacter arilaitensis Re117] Length = 365 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 20/201 (9%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++D L+ A L+ GGK++R LV + L + ++ A +E H +L HDD+ Sbjct: 68 NSDPLIDASSRHLVEAGGKRVRPLLVLLTSLLGEGVNDDVIKAAAVVELTHLATLYHDDV 127 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEIISSPKTQL-KDNIRSQLMLS 149 MD+ +RRG PT H + AI+AG+ + A F P+ + + +L L Sbjct: 128 --MDSAPMRRGAPTAHEVWGNSVAILAGDLIFARASVFGSELGPEAVMWQSRTFERLCLG 185 Query: 150 LTH-NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 H +IG + + + + E + +I KT +L+ + GA AS+ + Sbjct: 186 QLHESIGPR----------EGDDVIEHHIQVISD-KTASLLSTSGAFGARFGGASEF-ID 233 Query: 209 RLRCFGENLGIIFQLADDLLD 229 LR +GE +G+ FQ+ADD++D Sbjct: 234 VLREYGEKVGVAFQVADDVID 254 >gi|146321614|ref|YP_001201325.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33] gi|145692420|gb|ABP92925.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33] Length = 235 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 9/212 (4%) Query: 29 SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSL 87 S M H + Y GK +R+ L A + + L A +E +H +L Sbjct: 25 SEMMVLHPAVTAKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKLYFAAHLEVLHLATL 84 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D RRG H Q+ AI G+ LL Y+ + L+ S+ Sbjct: 85 IHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLFGKGLRLLE---VSRDD 139 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQ 204 L L ++ ++ +L G++ + ++F + T ++++ KT L AC+ G+ + S+ Sbjct: 140 LDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQLGSFVPGQSR 199 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + G+ LG+ FQL DDL+D + D+ + Sbjct: 200 KDSSMAFRSGQALGMAFQLRDDLIDYQLDVAE 231 >gi|300934189|ref|ZP_07149445.1| putative polyprenyl diphosphate synthase [Corynebacterium resistens DSM 45100] Length = 389 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 30/174 (17%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE----------------VTAIIAG 120 +A E I +LIHDD+ +D RRG PTVH +++ AI+ G Sbjct: 114 SAFEFIQACALIHDDI--VDQSDTRRGHPTVHREFERHHRDRKWLGSSEHYGISQAILIG 171 Query: 121 NGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177 + L +A +++ S TQ R T ++GGQ+LDI E V Sbjct: 172 DLALAWADDLLLDSGLSTQRLHQCRHAWRAMRTE------VIGGQILDIAVEASGTENVD 225 Query: 178 --FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + K KT + + GA +A AS+ E LR GE++G+ FQL DD L Sbjct: 226 HAWDVIKYKTASYTVARPLHVGAALAGASEELIEFLRTIGEDIGVAFQLRDDQL 279 >gi|315303877|ref|ZP_07874357.1| heptaprenyl diphosphate synthase component II [Listeria ivanovii FSL F6-596] gi|313627753|gb|EFR96406.1| heptaprenyl diphosphate synthase component II [Listeria ivanovii FSL F6-596] Length = 324 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 18/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L +R AIE IH S++HDD+ + +RRG+ T+ Sbjct: 47 GGKRIRPMFVCLSARLSPNADFEMVRDASVAIELIHMASIVHDDVVDDAD--LRRGRETI 104 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 105 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDIAAHKMLSRVTVELST-----GEIEQL 155 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G I++ SQ + ++L FG +G+ FQ+ Sbjct: 156 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGIVSGQSQADYQKLYRFGYYVGMAFQIT 215 Query: 225 DDLLD---CEEDLPK 236 DD+LD E++L K Sbjct: 216 DDVLDFVGTEKELGK 230 >gi|307325750|ref|ZP_07604950.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306888538|gb|EFN19524.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 766 Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 18/193 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 G+ R ++ L + + A E +H +L+ DD+ DN RRG+P+VH Sbjct: 454 GRSWRPYVAAAVLCLLGADPEPYRPLTAVTELLHVSALVIDDI--QDNSPTRRGRPSVHE 511 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + AI AG L Y F+ + Q D + L + + L+ GQ LD+ Sbjct: 512 IFGTAPAITAGT-LGYYTFDALIQRVPQADDG--TMLRIYRLYLRDLRAAHAGQALDLAG 568 Query: 170 EF--IDET-----------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 D+ Q+ ++KTG L+ E AI+ A + + + + + E Sbjct: 569 HHTAFDQAVATGDARPLLDQIRAAHRLKTGMLVRSTAEVSAILGGADETQLDAICAYFEA 628 Query: 217 LGIIFQLADDLLD 229 +GI +Q+ DD+ D Sbjct: 629 VGIAYQITDDVFD 641 >gi|38018123|gb|AAR08151.1| geranyl diphosphate synthase [Vitis vinifera] Length = 321 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 8/150 (5%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG +++I A++AG+ LL+ A ++S K Sbjct: 70 EMIHVASLLHDDV--LDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALASLKNT-- 125 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + S L + H + + M QM ++ + KT +L+ +C++ A++ Sbjct: 126 -EVVSLLATVVEHLVTGETM---QMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIALL 181 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + +G+NLG+ FQL DD LD Sbjct: 182 AGQTAEVSMLAFEYGKNLGLAFQLIDDXLD 211 >gi|256372659|ref|YP_003110483.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331] gi|256009243|gb|ACU54810.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331] Length = 338 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 19/204 (9%) Query: 33 TQHNDRLLSAIRYALLGGKKIRSFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLI 88 T D +A+ + GGK++R + + +R A+E +H SL Sbjct: 29 TTDPDITAAALHLIMAGGKRVRPLIALATALALGEVAPSPDDPVVRGAVAVELVHLASLY 88 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ MD RRG + + ++ + A++ G+ LL A I + +L + + + L Sbjct: 89 HDDV--MDEASERRGVSSANARFGNLIAVVTGDFLLARAAGIAA----RLGEEVAAALAD 142 Query: 149 SLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQN 205 +L M GQ+L++ D + T+ ++ KT +LM A AI+ Q Sbjct: 143 TLAA------MCEGQILEVADAHQLTRTTERYLATIAGKTASLMGTAARIPAIVLGRDQA 196 Query: 206 EKERLRCFGENLGIIFQLADDLLD 229 + L G LG++FQL DD+LD Sbjct: 197 MLDALSAAGTALGMLFQLRDDVLD 220 >gi|241957890|ref|XP_002421664.1| hexaprenyl pyrophosphate synthetase, putative [Candida dubliniensis CD36] gi|223645009|emb|CAX39602.1| hexaprenyl pyrophosphate synthetase, putative [Candida dubliniensis CD36] Length = 498 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 44/198 (22%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127 R+ +E IH SL+HDD+ +D RRG+P+ +I + A++AG+ LL A Sbjct: 199 RLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 256 Query: 128 ------FEIISS-------------PKTQLKDNIRSQL---------------MLSLTHN 153 E++S+ T L++N ++ + + H Sbjct: 257 LRNPEVIELLSTTIANLVEGEFMQLKNTVLQNNNNDEIFNDGDVKSIPQPTGKVPTKLHQ 316 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLR 211 +Q GG + + ++ + + K +KT +LM +C + A+++ + + E Sbjct: 317 YSVQQKNGGDAVVDHNINVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGSQDDIIENCY 376 Query: 212 CFGENLGIIFQLADDLLD 229 FG NLG+ FQ+ DD+LD Sbjct: 377 QFGRNLGLCFQIVDDMLD 394 >gi|94502254|ref|ZP_01308739.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833697|ref|YP_001597893.1| polyprenyl synthetase [Candidatus Sulcia muelleri GWSS] gi|293977807|ref|YP_003543237.1| geranylgeranyl pyrophosphate synthase [Candidatus Sulcia muelleri DMIN] gi|94451192|gb|EAT14132.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206187|gb|ABS30497.1| polyprenyl synthetase [Candidatus Sulcia muelleri GWSS] gi|292667738|gb|ADE35373.1| Geranylgeranyl pyrophosphate synthase [Candidatus Sulcia muelleri DMIN] Length = 326 Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 30/195 (15%) Query: 48 LGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 + GK IR FL+T+ N++ T + IE IH SLIHDD+ N RRG Sbjct: 45 IKGKYIRPIFVFLITKMLG--NISKKTY-DLAILIELIHTASLIHDDVIDFSNT--RRGF 99 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQ 163 +++ + TA+I G+ + + S +K+N L ++S T ++ M G+ Sbjct: 100 LSINAIWQNKTAVIFGDYIFS------KSLNIAIKNNYIDYLNLISKT----IEQMSEGE 149 Query: 164 MLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL----RCFGEN 216 +L ++ + FI E +I KT L+ CE A S N+K+++ + FGE Sbjct: 150 ILQMKYFNNFFIKEYIYNIIIFKKTAILISACCEGCA----KSLNKKKKIVLNIKKFGEL 205 Query: 217 LGIIFQLADDLLDCE 231 G+ FQ+ DDLLD + Sbjct: 206 AGMAFQIKDDLLDYK 220 >gi|120402007|ref|YP_951836.1| trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1] gi|119954825|gb|ABM11830.1| Trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1] Length = 329 Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 16/182 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A L + V GA IE +H +L HDD+ MD +RRG P+ Sbjct: 49 GGKRFRPLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSA 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ L A ++S I L +T GQM + Sbjct: 107 NARWSNNIAILAGDYLFATASRLVSRLGPDAVRIIADTFALLVT----------GQMRET 156 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + +DE ++ + KT L+ + GA + A + ERL G +G FQ++ Sbjct: 157 RGAADHVDEVDHYLKVVYEKTACLIAASGRFGATFSGADDEQIERLARLGGIVGTAFQIS 216 Query: 225 DD 226 DD Sbjct: 217 DD 218 >gi|303398760|emb|CBW46741.1| B318L [African swine fever virus Georgia 2007/1] Length = 318 Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 36/242 (14%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 P + S+ +TIL++ + +L YAL GGK IR ++ E Sbjct: 46 PKNYKTFSEEFETILNNAI------EDGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99 Query: 66 NVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + H + A E H SLI DD+PS DN RR K TV ++ A ++ Sbjct: 100 QLQHSFGAPIYPAEAALAAEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159 Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171 L F+ I P+ + + + L ++H++ G GQ++D ++ Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPEKT 217 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I F I + L + E ++ A+ CFG FQLADD+ D + Sbjct: 218 I---PFFKIAFIMGWVLGTGSVEDIGMIERAAH-------CFGH----AFQLADDIKDHD 263 Query: 232 ED 233 D Sbjct: 264 TD 265 >gi|290955089|ref|YP_003486271.1| polyprenyl synthatase [Streptomyces scabiei 87.22] gi|260644615|emb|CBG67700.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22] Length = 345 Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 18/193 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L A + + A+E +H +SL+HDD+ MD RR +PTV Sbjct: 62 GGKGVRQALAVLGAEVVGAPARAGVPAAVAVELVHVFSLLHDDI--MDGDVERRRRPTVW 119 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 Y A++AG+ L A E +++ + + + +L+ +G ++ GQ D+ Sbjct: 120 KAYGTGPAVLAGDALFALAVETLATAEPG------ASALRTLSAALGE--LVRGQADDLL 171 Query: 168 -------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 E + + + + KTGAL+ A GA++ L G LG+ Sbjct: 172 FAARPWAGPERVRPAEYRAMAERKTGALLGCAAALGALLGGGPPAAVAALDRAGRRLGLA 231 Query: 221 FQLADDLLDCEED 233 FQ+ DD+L D Sbjct: 232 FQIVDDVLGIWGD 244 >gi|253752432|ref|YP_003025573.1| polyprenyl synthetase [Streptococcus suis SC84] gi|253754258|ref|YP_003027399.1| polyprenyl synthetase [Streptococcus suis P1/7] gi|253756192|ref|YP_003029332.1| polyprenyl synthetase [Streptococcus suis BM407] gi|251816721|emb|CAZ52363.1| polyprenyl synthetase [Streptococcus suis SC84] gi|251818656|emb|CAZ56491.1| polyprenyl synthetase [Streptococcus suis BM407] gi|251820504|emb|CAR47259.1| polyprenyl synthetase [Streptococcus suis P1/7] gi|292559037|gb|ADE32038.1| Polyprenyl synthetase [Streptococcus suis GZ1] gi|319758838|gb|ADV70780.1| polyprenyl synthetase [Streptococcus suis JS14] Length = 329 Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 9/212 (4%) Query: 29 SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSL 87 S M H + Y GK +R+ L A + + L A +E +H +L Sbjct: 25 SEMMVLHPAVTAKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKLYFAAHLEVLHLATL 84 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 IHDD+ +D RRG H Q+ AI G+ LL Y+ + L+ S+ Sbjct: 85 IHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLFGKGLRLLE---VSRDD 139 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQ 204 L L ++ ++ +L G++ + ++F + T ++++ KT L AC+ G+ + S+ Sbjct: 140 LDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQLGSFVPGQSR 199 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + G+ LG+ FQL DDL+D + D+ + Sbjct: 200 KDSSMAFRSGQALGMAFQLRDDLIDYQLDVAE 231 >gi|308177142|ref|YP_003916548.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117] gi|307744605|emb|CBT75577.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117] Length = 369 Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 26/243 (10%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 P++ Q+ S R++ I + Q S + L S I +L GK +R LV F Sbjct: 28 PTR-QKISDRLEEIA--IQAQRRSAAYSAQTALLWSRISKSLATGKLMRPSLVMLGYRAF 84 Query: 66 NV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-DEVTA------- 116 N A+ +G A E +H LIHDD+ +D ++RRGK T+ Y D+ +A Sbjct: 85 GGGNEARAIDLGCAFELLHAALLIHDDV--VDRDFMRRGKATISALYRDQASASGRSLAD 142 Query: 117 ---------IIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLD 166 IIAG+ L++ A ++ + Q G G L + Sbjct: 143 AEHAGNSVGIIAGDLLISEAIKLAARAAAGSDSEAGVEQAFFEAIEQAG-AGELEDLLYS 201 Query: 167 IQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +QV +++MKT A ++GA++A A + E + G LG+ +Q+ D Sbjct: 202 LGSAAATTSQVLRMEQMKTAAYSFQLPLQAGALLAGAHPGQAEAIGAVGCQLGVAYQIID 261 Query: 226 DLL 228 D+L Sbjct: 262 DVL 264 >gi|298529963|ref|ZP_07017365.1| Trans-hexaprenyltranstransferase [Desulfonatronospira thiodismutans ASO3-1] gi|298509337|gb|EFI33241.1| Trans-hexaprenyltranstransferase [Desulfonatronospira thiodismutans ASO3-1] Length = 322 Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 10/188 (5%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GGK++R L A + ++E +H +LIHDD+ +D+ RRG+ Sbjct: 39 LSGGKRLRPMLTILTARCLGYQDQDIYPLACSLEFLHSATLIHDDI--LDSADTRRGQTA 96 Query: 107 VHIQYD-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 H+ + T + L + + + +M + T + ++ Sbjct: 97 CHLAFGLHRTVLAGDALLALANLIVARYDIPAMNYCVAQAIMRTATGEVE-------EIA 149 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 I+ D T I + KT L+ AC GA++A A Q + FG N+G+ FQL D Sbjct: 150 QIRSPRPDRTAYLEIIQGKTADLIRAACSCGAMLARADQERLDHADSFGFNVGMAFQLVD 209 Query: 226 DLLDCEED 233 D LD D Sbjct: 210 DALDYAAD 217 >gi|225351338|ref|ZP_03742361.1| hypothetical protein BIFPSEUDO_02931 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157682|gb|EEG70965.1| hypothetical protein BIFPSEUDO_02931 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 364 Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 36/209 (17%) Query: 49 GGKKIRSFLVTECASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++RS L + F + L + A+E +L+HDD+ +D+ +RR Sbjct: 51 GGKRLRSLLTLDSFRAFASEDVRERDFDALLDLACAVEVFQTGALVHDDI--IDDSDLRR 108 Query: 103 GKPTVHIQYDEVTAIIA-GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML- 160 GKP+ H + T A G+GL +++++ + D S+L TH + L Sbjct: 109 GKPSAHRAFSTGTHSEAIGHGLGIMLGDMLATASVDIADKAASKL----THGSDVVAALL 164 Query: 161 -------GGQMLDIQ---------DEFIDET-QVFMIQKMKTGALMCFA-CESGAIMAHA 202 GQ+LD+ DE ++ + VF + KT + A E G + A Sbjct: 165 NMHREVEVGQVLDLAVELNPLDDPDELVEASLNVF---RWKTASYTTIAPLEFGMLAAGI 221 Query: 203 SQNE-KERLRCFGENLGIIFQLADDLLDC 230 +++ +++ G LG+ FQLADDLLD Sbjct: 222 GKDDARKQALAVGLPLGLAFQLADDLLDV 250 >gi|30468171|ref|NP_849058.1| prenyl transferase [Cyanidioschyzon merolae strain 10D] gi|30409271|dbj|BAC76220.1| prenyl transferase [Cyanidioschyzon merolae strain 10D] Length = 315 Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 22/196 (11%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR +F++ +L ++ + R+ E IH SL+HDD+ +D RRG TV Sbjct: 37 GGKRIRPTFVLLVSQALGGISQ-SQQRLAEITEMIHTASLLHDDV--VDEASKRRGIDTV 93 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ A++AG+ L + +++ S+L+ L G+M Sbjct: 94 NTRFSNRIAVLAGDFLFAQSSWYLANLNNLEVVKFISKLISDLAE---------GEMRQT 144 Query: 168 QDEFIDETQVF-MIQK--MKTGALMCFACESGAIMA----HASQNEKERLRCFGENLGII 220 +F + +++ ++K KT +L FAC + A H + + + G++LGI Sbjct: 145 STQFSTQFELWAYLEKSFYKTASL--FACSAKATCMLSNDHEDNHHHKNMYLLGQHLGIA 202 Query: 221 FQLADDLLDCEEDLPK 236 FQ+ DD+LD D+ + Sbjct: 203 FQIMDDVLDISGDISQ 218 >gi|302024379|ref|ZP_07249590.1| polyprenyl synthetase [Streptococcus suis 05HAS68] Length = 235 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 8/169 (4%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + L A +E +H +LIHDD+ +D RRG H Q+ AI G+ LL Y+ + Sbjct: 68 SKLYFAAHLEVLHLATLIHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRL 125 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGA 187 L+ S+ L L ++ ++ +L G++ + ++F + T ++++ KT Sbjct: 126 FGKGLRLLE---VSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAF 182 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L AC+ G+ + S+ + G+ LG+ FQL DDL+D + D+ + Sbjct: 183 LFGLACQLGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAE 231 >gi|315271298|gb|ACO46812.2| putative octaprenyl-diphosphate synthase [Deinococcus deserti VCD115] Length = 324 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 18/189 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK+ R + A V ++ + +G +E +H SL+HDDL +D+ RRG Sbjct: 40 GGKRTRPMITLLAAQALGVGPGSSQWPEVIDLGVCVELLHSASLLHDDL--IDDADTRRG 97 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + ++ V ++++G+ +L +++ + S L+ + G+ Sbjct: 98 QQAAFRRFGNVVSVMSGDFMLARLLTLLA--------GMPSGTALTRAFGETASQICEGE 149 Query: 164 MLDIQ-DEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 +L Q + D I KT AL A + A++ +S+ ++E L FG G+ Sbjct: 150 VLQFQVAAYADYGLEHYLNIIHGKTAALTELAACAPAMLLGSSEAQREALATFGREYGLA 209 Query: 221 FQLADDLLD 229 FQ+ DDLLD Sbjct: 210 FQMQDDLLD 218 >gi|218294793|ref|ZP_03495647.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23] gi|218244701|gb|EED11225.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23] Length = 315 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 36/235 (15%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 P L+ + L +L+ ++ H D L++A GGK+IR LV Sbjct: 4 PLPLEAKLAAFEEALSELVRSEVLFVRLIHQD-LVTA------GGKRIRPRLV------- 49 Query: 66 NVNHLTALRVGAA---------IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 L + VG A +E +H +L+HDDL +D +RRGK + +Y + Sbjct: 50 ---FLASGAVGGAPFELELALAVELLHSATLLHDDL--IDEAELRRGKEAAYRRYGNAVS 104 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-MLGGQMLDIQDEFIDET 175 +++G+ LL+ +++ KT + + + + T + +G +L Q+ ++D ++ Sbjct: 105 VLSGDFLLSRLLHVVA--KTGSLELVEA---FAETARVLAEGEVLQFQVAALEDYSLENY 159 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + I KT ALM A E A++ +E LR FG G FQ+ DD LD Sbjct: 160 E--RIITAKTAALMALATEGPALLKGLKGAWREALRRFGLLYGQAFQMRDDYLDL 212 >gi|332797814|ref|YP_004459314.1| polyprenyl synthetase [Acidianus hospitalis W1] gi|332695549|gb|AEE95016.1| polyprenyl synthetase [Acidianus hospitalis W1] Length = 282 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 25/232 (10%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 L E +R I+D L+ + ++ ++ +Y + GK+ R LV Sbjct: 3 LIEFWERSKVIIDSLVTKFVDDVKDWE---IMEMSKYIMKDGKRFRGTLVFLFNDALGGE 59 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A + A E +H SL DD+ +D RRG + Y I N L+ A Sbjct: 60 EKNAYQGALATEILHSASLALDDI--VDYDLTRRGMASAWAVYTNRRVIFVSNFLIPTAL 117 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 +IISS + NI ++ + ++D + D+ + F ++KT +L Sbjct: 118 KIISSYGKE-------------ALNISIELWKDTAIGALKDMYGDKREYFKTIELKTASL 164 Query: 189 MCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLPKK 237 A++A S +KE +L G LG+I+QL DD +DC + P+K Sbjct: 165 FKLP----AMLASFSSGKKELVDKLLEAGRVLGVIYQLIDDYVDCVKLEPEK 212 >gi|308233677|ref|ZP_07664414.1| Polyprenyl synthetase [Atopobium vaginae DSM 15829] gi|328943611|ref|ZP_08241076.1| putative geranyltranstransferase [Atopobium vaginae DSM 15829] gi|327491580|gb|EGF23354.1| putative geranyltranstransferase [Atopobium vaginae DSM 15829] Length = 366 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 13/173 (7%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T L++ A E +LIHDD+ D +RRGKP ++ + A G+ L +A E Sbjct: 97 TLLQISCAFEHFQAAALIHDDIA--DESLLRRGKPCLYRVHGTGLATNMGDSALVHALEC 154 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQG-MLGGQMLDI--QDEFIDETQVFMIQKMKTGA 187 I+S + + D +R +L+ I ++ + GQ LD+ +E + + M T Sbjct: 155 INS-LSGISDELRVRLIQEF---ITMEKHTIEGQALDVGWSNENRWDISLDDYLYMATSK 210 Query: 188 LMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++ + GA+ A ASQ E LR +G G+ FQL DD L+ D K Sbjct: 211 TAYYSASTPLVIGALFAGASQKRSEALRAYGLQAGLAFQLKDDELNLFGDANK 263 >gi|226356826|ref|YP_002786566.1| octaprenyl-diphosphate synthase [Deinococcus deserti VCD115] Length = 318 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 18/189 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA-----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK+ R + A V ++ + +G +E +H SL+HDDL +D+ RRG Sbjct: 34 GGKRTRPMITLLAAQALGVGPGSSQWPEVIDLGVCVELLHSASLLHDDL--IDDADTRRG 91 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + ++ V ++++G+ +L +++ + S L+ + G+ Sbjct: 92 QQAAFRRFGNVVSVMSGDFMLARLLTLLA--------GMPSGTALTRAFGETASQICEGE 143 Query: 164 MLDIQ-DEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 +L Q + D I KT AL A + A++ +S+ ++E L FG G+ Sbjct: 144 VLQFQVAAYADYGLEHYLNIIHGKTAALTELAACAPAMLLGSSEAQREALATFGREYGLA 203 Query: 221 FQLADDLLD 229 FQ+ DDLLD Sbjct: 204 FQMQDDLLD 212 >gi|294654995|ref|XP_457083.2| DEHA2B02640p [Debaryomyces hansenii CBS767] gi|199429612|emb|CAG85071.2| DEHA2B02640p [Debaryomyces hansenii] Length = 483 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 40/194 (20%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127 R+ +E IH SL+HDD+ +D RRG+P+ +I + A++AG+ LL A Sbjct: 188 RLAEIVEMIHTASLLHDDV--IDLSDTRRGRPSGNIAFSNKMAVLAGDFLLGRASVAIAR 245 Query: 128 ------FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-----------GQMLDIQDE 170 E++S+ L + QL ++ N G + G++ ++ E Sbjct: 246 LRNPEVIELLSTTIANLVEGEFMQLKNTVMSNEGPDSITNDGDIKNIPKATGKVPTVEHE 305 Query: 171 F-------ID-ETQV-----FMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + +D T V + + K +KT +LM + + +++ + N E FG Sbjct: 306 YSVTAPGEVDHNTNVSAAFEYYLHKTYLKTASLMSKSSRAAGVLSGSQDNIIENCYDFGR 365 Query: 216 NLGIIFQLADDLLD 229 NLG+ FQ+ DD+LD Sbjct: 366 NLGLCFQIVDDMLD 379 >gi|42527045|ref|NP_972143.1| polyprenyl synthetase family protein [Treponema denticola ATCC 35405] gi|41817469|gb|AAS12054.1| polyprenyl synthetase family protein [Treponema denticola ATCC 35405] Length = 350 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 11/189 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R L L + A + IE H SL+HDD+ D RRG P H Sbjct: 64 GGKRWRPLLCVLSCELAEGDPEKAYPLTPLIEFCHTASLVHDDIE--DKSDTRRGAPAAH 121 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 I+Y TA+ + + L A + + ++ +++R+ + + N L+ + GQ +DI Sbjct: 122 IKYGLDTALNSASWLYFEALNPLIN--YEVSESVRAVIYSLYSQN--LRRLHLGQSMDIG 177 Query: 168 ----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D + + +KTG+L A E G I A NE ++GI FQ+ Sbjct: 178 WHSNSDIIPSVDEYITMISLKTGSLAKLAGELGFIAAGKPINEVLEYGKLMTDMGIGFQI 237 Query: 224 ADDLLDCEE 232 DD+ + E Sbjct: 238 LDDVKNITE 246 >gi|270158512|ref|ZP_06187169.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968] gi|289166652|ref|YP_003456790.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] gi|269990537|gb|EEZ96791.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968] gi|288859825|emb|CBJ13806.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] Length = 322 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + + + A IE H +L+HDD+ +D+ +RRG+ T + Sbjct: 43 GGKRLRCLLVLLASRACGYEGKEHIMLAAMIEFFHTATLLHDDV--IDDSTLRRGRDTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG---LQGMLGGQML 165 + +I+ G+ L T E++ ++ D QL++ + +G +Q Sbjct: 101 KIWGNKASILVGDYLFTKYLELM----VEVGDIDIIQLLIGIAPQMGCGEIQQFSNRHNA 156 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D+ E + F + + KT L + GA+++ + ++ + +G +LG FQL D Sbjct: 157 DLSVE-----EYFDMIRAKTALLFAASSAIGALISKSEHQIQKAMYSYGLHLGNAFQLID 211 Query: 226 DLLD 229 D LD Sbjct: 212 DALD 215 >gi|223933610|ref|ZP_03625590.1| Polyprenyl synthetase [Streptococcus suis 89/1591] gi|330833373|ref|YP_004402198.1| polyprenyl synthetase [Streptococcus suis ST3] gi|223897736|gb|EEF64117.1| Polyprenyl synthetase [Streptococcus suis 89/1591] gi|329307596|gb|AEB82012.1| Polyprenyl synthetase [Streptococcus suis ST3] Length = 329 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 8/169 (4%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + L A +E +H +LIHDD+ +D RRG H Q+ AI G+ LL Y+ + Sbjct: 68 SKLYFAAHLEVLHLATLIHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRL 125 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGA 187 L+ S+ L L ++ ++ +L G++ + ++F + T ++++ KT Sbjct: 126 FGKGLRLLE---VSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAF 182 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L AC+ G+ + S+ + G+ LG+ FQL DDL+D + D+ + Sbjct: 183 LFGLACQLGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAE 231 >gi|298245028|ref|ZP_06968834.1| Polyprenyl synthetase [Ktedonobacter racemifer DSM 44963] gi|297552509|gb|EFH86374.1| Polyprenyl synthetase [Ktedonobacter racemifer DSM 44963] Length = 367 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 8/154 (5%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA-FEIISSPKTQ 137 +E H ++LIHDD+ +D RR +PT+ + I +G+G+ + + Sbjct: 101 VELTHNFTLIHDDI--VDGDTERRHRPTLWTVWGMPNGINSGDGMFALSRLALWGVLDEG 158 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACE 194 ++ +I ++L L + + GQ LD+ E + V M M KT LM + E Sbjct: 159 VEADIAARLGACLDKACLV--VAEGQYLDMSFEGRQDISVAMYIDMIRRKTAELMACSAE 216 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA + RLR FGE +GI FQ+ DDLL Sbjct: 217 MGARLGTRDAEAIARLRSFGEAIGIAFQVRDDLL 250 >gi|297562507|ref|YP_003681481.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846955|gb|ADH68975.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 380 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 37/216 (17%) Query: 41 SAIRYALLGGKKIRSFL-----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + +R+ L GGK++R L + + A + AA+E + +L+HDD+ M Sbjct: 61 TTVRFTLGGGKRMRPLLAWWGWLAGGGAPSGETARAARQACAAVELVQTCALVHDDV--M 118 Query: 96 DNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 D RRG+P+VH +Y E A++ G+ L +A ++++ + Sbjct: 119 DGSPTRRGRPSVHAAHALEHERDGHVGDSRRYGEALAVLVGDLALVWADDMLNEALPGVP 178 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACES- 195 + +R++ ++ ++ + ++ GQ LD++ + E + +KT ++ E Sbjct: 179 EPVRAR---AVWRDLRTE-IMAGQFLDVRAQARRERSEEAALRVDLLKT---ASYSVERP 231 Query: 196 ---GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA MA A LR +G ++GI FQL DDLL Sbjct: 232 LHLGAAMAGADPAAVGALRGYGRDVGIAFQLRDDLL 267 >gi|269794596|ref|YP_003314051.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM 10542] gi|269096781|gb|ACZ21217.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM 10542] Length = 361 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 39/241 (16%) Query: 16 IDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECAS-LFNVNHLTA 72 +D++LDD + +D +L ++++ A GGK++R L+T L + A Sbjct: 22 VDSVLDDFFAEAIDRSDAYGSDYTQLWTSLQSASQGGKRLRPLLLTGVYDQLGGTDTALA 81 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------DE-------VT 115 +GAA+E +H ++HDD+ +D+ +RRG+ V + DE Sbjct: 82 ATIGAAVELLHTAFVVHDDV--IDHDVVRRGRLNVSGTFAQRARAEGADDERAENLGAAA 139 Query: 116 AIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF- 171 I+AG+ LT A +++ +P + +D L+ H + + G++ D++ Sbjct: 140 GILAGDLALTGAHRLVAFSDAPASTRRD-----LVHLFDHAVYVTA--AGELSDVRYSLD 192 Query: 172 ---IDETQVFMIQKMKTGALMCF--ACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + + KT A+ F ++GA++A A E L G +G FQL DD Sbjct: 193 LAPVGLADIVAMAAHKT-AVYSFELPLQAGAVLAGADPRTVEWLSHVGRLVGTAFQLLDD 251 Query: 227 L 227 + Sbjct: 252 I 252 >gi|323699172|ref|ZP_08111084.1| Polyprenyl synthetase [Desulfovibrio sp. ND132] gi|323459104|gb|EGB14969.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132] Length = 322 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 18/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR A L + A+E +H +L+HDD +D+ +RRG+ H Sbjct: 41 GGKRIRPLFTLLFARALGYAKDDYLAIACALELLHSATLLHDDY--LDDAELRRGRAASH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + I+AG+ LL A E+ + N R +L+ G+ G++ +I Sbjct: 99 LVFGRTETILAGDALLALANEMGAR-----YGNPRLSWLLA----KGIMETATGEIEEI- 148 Query: 169 DEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 EF ++ I KT L+ AC GA +A A+ +++ FG N+GI FQL Sbjct: 149 -EFSRAPSLNRETYMRIIVGKTARLIECACRCGAALAGATPEQEDAAGEFGLNVGIAFQL 207 Query: 224 ADDLLD 229 DD LD Sbjct: 208 VDDALD 213 >gi|257056769|ref|YP_003134601.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] gi|256586641|gb|ACU97774.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis DSM 43017] Length = 361 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 34/180 (18%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVTA 116 LR A++E I +LIHDD+ +D+ RRG PTVH+ + + A Sbjct: 77 LRAVASLELIQACALIHDDV--IDSSDSRRGSPTVHVAFAARHTRERWLGSAEAFGQAAA 134 Query: 117 IIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172 ++ G+ L +A ++ + P T + M + +L GQ LD+ + Sbjct: 135 VLIGDLALAWAEDMFAECGLPPATIAAARPAWRAMRT--------EVLAGQYLDVHTQAT 186 Query: 173 DETQV---FMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +T V + ++KT A GA +A A + L FG LG+ FQL DDLL Sbjct: 187 GDTSVEAALRVDRLKTAAYTVQRPLHLGAALAGADDELIDALLDFGGELGVAFQLRDDLL 246 >gi|256395056|ref|YP_003116620.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928] gi|256361282|gb|ACU74779.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928] Length = 340 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 18/149 (12%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H ++L+HDD+ +D RR +PT + AI+AG+ +L A ++ Sbjct: 95 HNFTLLHDDV--IDRDQTRRHRPTAWTVFGAENAILAGDAMLALALRLVGGEAA------ 146 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIM 199 S+L + + GQ D E D+ + + KTGAL+ AC G + Sbjct: 147 -SRLAECVIE------ICDGQYEDCAFELRDDVTLDECLAMAGKKTGALLGCACALGGLA 199 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228 A L FG LG+ FQL DDLL Sbjct: 200 VRADPLTVAALDLFGRELGMAFQLTDDLL 228 >gi|256392496|ref|YP_003114060.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928] gi|256358722|gb|ACU72219.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928] Length = 347 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 29/235 (12%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRS-FLVTECASLFNVNH 69 RIDT L + + ++ D LL+ + R A+ GK+IR+ F + + Sbjct: 10 RIDTELRAFVREETGLLEA--VDPLLAPVGAQLRAAVADGKRIRAAFCYWGWRAAGQGDT 67 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-------------A 116 +R AA+E +H +L+HDDL +D+ +RRG PT H+ E T A Sbjct: 68 PAMVRAAAAMELVHAAALVHDDL--IDDSLLRRGVPTPHVALREATAKAPDPDGAARSLA 125 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDE 174 ++ G+ L+ +A ++ + R++ M S+ + ++ G+ L++ D Sbjct: 126 LLVGDLLMAWAGQLFTGSGLPAVYLARARPMWSVLA----RELIAGECLEVLRTGTETDP 181 Query: 175 TQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I + KT + G + AS +G LG FQL DDLL Sbjct: 182 QESLTIIRYKTAKYTVEHPLQIGGRLGGASARTLGVFSDYGLPLGEAFQLRDDLL 236 >gi|37912978|gb|AAR05310.1| predicted geranylgeranyl pyrophosphate synthase [uncultured marine gamma proteobacterium EB000-45B06] gi|40063209|gb|AAR38046.1| polyprenyl synthetase family protein [uncultured marine bacterium 562] Length = 316 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 94/180 (52%), Gaps = 8/180 (4%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R+ L +S L++ A IE +H +L+HDD+ +D RRG +V+ Sbjct: 40 GKQLRARLSLIASSADRRQGKKRLKLAAIIELLHNATLVHDDV--VDESPTRRGVKSVNN 97 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + ++ G+ + + AF ++ +L ++ + + + T++I ++ Q+ I + Sbjct: 98 IWTNAHGVLIGDYIYSKAFMLM----VELGNSKILEELSNATNDISKGELI--QLDAIAN 151 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I +++ I KTG L + + GA++ ++ ++ + +NLGI+FQ+ DDLLD Sbjct: 152 TGISLSELEDISYFKTGRLFEASAKCGALLCNSKKSYVNSISECAKNLGIVFQIKDDLLD 211 >gi|145223562|ref|YP_001134240.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK] gi|315443909|ref|YP_004076788.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] gi|145216048|gb|ABP45452.1| geranylgeranyl-diphosphate synthase [Mycobacterium gilvum PYR-GCK] gi|315262212|gb|ADT98953.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] Length = 359 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 36/215 (16%) Query: 45 YALLGGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 + L GGK++R A H+ +R+ +A+E +H +L+HDDL +D Sbjct: 47 FVLRGGKRLRPAFAYWGFRAVAGTEPEPHI--MRLFSALELLHACALVHDDL--IDASAT 102 Query: 101 RRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 RRG PTVH + E AI+ G+ L +A +II+ + R Sbjct: 103 RRGLPTVHRIFSERHRSNNWLGSSDQFGLSAAILLGDLSLVWADDIIAEAPIDDAAHRRV 162 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAH 201 Q + + +LGGQ LDI +E V + KT + + A Sbjct: 163 QRVWAAIRT----EVLGGQYLDIVNEASGSETVASALTVNIYKTASYTI--SRPLQLGAA 216 Query: 202 ASQNEKERLRCF---GENLGIIFQLADDLLDCEED 233 A+ + E L F G +LG+ FQL DD+L D Sbjct: 217 AAGDRPEILEAFHELGTSLGVAFQLRDDVLGVYGD 251 >gi|302348187|ref|YP_003815825.1| Geranylgeranyl pyrophosphate synthetase, putative [Acidilobus saccharovorans 345-15] gi|302328599|gb|ADL18794.1| Geranylgeranyl pyrophosphate synthetase, putative [Acidilobus saccharovorans 345-15] Length = 310 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 16/187 (8%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y + GGK R F+ A N A A+E + SL DD+ +D RRG Sbjct: 46 YIVKGGKMFRGFMTMLFAEAAGGNLDRAKDAAIAVELVQGASLALDDI--IDKDAERRGG 103 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQ 163 P+ + Y + +A L+ A +++ L+L+++I + M+ G+ Sbjct: 104 PSAWVLYGIGKSAMASLLLVPTALKLVEQYGP-----------LALSYSITAWESMVRGE 152 Query: 164 MLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 ++D ++ + + +KTG+L A G I A+ + ER +G +G +Q Sbjct: 153 IMDAYSSLNLEPVEYLQLASLKTGSLFSLASTLGVIAAN-HEEYAERAWNYGNIVGTAYQ 211 Query: 223 LADDLLD 229 LADD+ D Sbjct: 212 LADDITD 218 >gi|86740094|ref|YP_480494.1| polyprenyl synthetase [Frankia sp. CcI3] gi|86566956|gb|ABD10765.1| Polyprenyl synthetase [Frankia sp. CcI3] Length = 634 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 30/176 (17%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAG 120 AAIE +H +LIHDD+ MD RRG+P H ++ V AI+ G Sbjct: 320 AAIELLHACALIHDDV--MDASDTRRGRPAAHRRFSRVHRTAGWRGDPADFGRSAAILLG 377 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEF-----ID 173 + L +A E++++ + + +R+ + ++ GQ LD+ Q E +D Sbjct: 378 DLFLAWADELLAASRMPPEALVRAWPTYGRMRSE----LMAGQYLDLVGQAEAGPHGGLD 433 Query: 174 ETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I + KT G + + G ++A A + FG LG FQL DDLL Sbjct: 434 PGRAVRIARYKTAGYTVVRPLQLGGLLAGAPPDLLAAYAAFGLPLGEAFQLRDDLL 489 >gi|15920702|ref|NP_376371.1| isoprenyl diphosphate synthase [Sulfolobus tokodaii str. 7] gi|15621485|dbj|BAB65480.1| 283aa long hypothetical isoprenyl diphosphate synthase [Sulfolobus tokodaii str. 7] Length = 283 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 29/229 (12%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR---SFLVTEC 61 L S +++ + ID ++DD L+ +LL +Y L GK+ R +FL TE Sbjct: 3 LLSYWKKSKEIIDKLVDDYLVDIKDW-------QLLEVSKYILKDGKRFRGTLTFLFTEA 55 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 N + A + A E +H SL DD+ +D IRRG + Y I N Sbjct: 56 ---LNGDIKNAYKAALASEILHSASLALDDI--VDYDIIRRGGSSAWAIYTNRKVIFITN 110 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L+ A IIS T ++ ++ + L +G ++D F ++ Sbjct: 111 YLIPSALNIIS---TYGEEALKISIQLWKDTAVGA----------LKDIFGSPSEYLSTI 157 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++KT +L + + +H +E L G+ +GI +QL DD +DC Sbjct: 158 ELKTSSLFKLSTMLASFASHREDLVEETLDI-GKYIGIAYQLVDDYIDC 205 >gi|220910193|ref|YP_002485504.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7425] gi|219866804|gb|ACL47143.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7425] Length = 323 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 11/183 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK+IR +V A + + + R+ E IH SL HDD+ +D +RRG PT Sbjct: 45 GKRIRPAIVLLLARAISPSQEISSRHRRLAEITEMIHTASLFHDDV--VDQSDLRRGLPT 102 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 VH + AI AG+ L A ++ + SQ++ QG Sbjct: 103 VHSLFGNRIAIQAGDFLFAQASWYLADLDNLTVVKLLSQVIKDFAEGEIQQGFNRFDTSL 162 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++D+T KT +L+ + ++ +++ S + L +G ++G+ FQ+ DD Sbjct: 163 TMAAYLDKTY------YKTASLIANSSKAVGVLSGISAQSSQSLYEYGRHVGLAFQIVDD 216 Query: 227 LLD 229 +LD Sbjct: 217 ILD 219 >gi|255030470|ref|ZP_05302421.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes LO28] Length = 292 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 18/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD+ + +RRG+ T+ Sbjct: 32 GGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 89 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 90 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 140 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 141 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 200 Query: 225 DDLLD---CEEDLPK 236 DD+LD E++L K Sbjct: 201 DDVLDFVGTEKELGK 215 >gi|108862467|gb|ABA97399.2| Prenyl transferase, putative, expressed [Oryza sativa Japonica Group] gi|222630738|gb|EEE62870.1| hypothetical protein OsJ_17673 [Oryza sativa Japonica Group] Length = 245 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 14/151 (9%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH SLIHDD+ +D+ +RRGK T+H Y A++AG+ + + ++ N Sbjct: 2 IHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------N 51 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI 198 + + ++ L + ++ G++ F I + KT +L+ + S AI Sbjct: 52 LENIEVIKLISQV-IKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAI 110 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + S E++ +G NLG+ FQ+ DD+LD Sbjct: 111 FSGVSTAICEQMYEYGRNLGLSFQVVDDILD 141 >gi|16803969|ref|NP_465454.1| hypothetical protein lmo1930 [Listeria monocytogenes EGD-e] gi|224501271|ref|ZP_03669578.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes FSL R2-561] gi|254827185|ref|ZP_05231872.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL N3-165] gi|254831469|ref|ZP_05236124.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes 10403S] gi|254899373|ref|ZP_05259297.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes J0161] gi|254912488|ref|ZP_05262500.1| heptaprenyl diphosphate syntase component II [Listeria monocytogenes J2818] gi|254936815|ref|ZP_05268512.1| heptaprenyl diphosphate synthase [Listeria monocytogenes F6900] gi|255025694|ref|ZP_05297680.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes FSL J2-003] gi|16411383|emb|CAD00008.1| lmo1930 [Listeria monocytogenes EGD-e] gi|258599568|gb|EEW12893.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL N3-165] gi|258609410|gb|EEW22018.1| heptaprenyl diphosphate synthase [Listeria monocytogenes F6900] gi|293590470|gb|EFF98804.1| heptaprenyl diphosphate syntase component II [Listeria monocytogenes J2818] Length = 321 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD+ + +RRG+ T+ Sbjct: 44 GGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 212 Query: 225 DDLLD 229 DD+LD Sbjct: 213 DDVLD 217 >gi|183601372|ref|ZP_02962742.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium animalis subsp. lactis HN019] gi|219683427|ref|YP_002469810.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium animalis subsp. lactis AD011] gi|241191129|ref|YP_002968523.1| bifunctional short chain isoprenyl diphosphatesynthase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196535|ref|YP_002970090.1| bifunctional short chain isoprenyl diphosphatesynthase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218978|gb|EDT89619.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium animalis subsp. lactis HN019] gi|219621077|gb|ACL29234.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium animalis subsp. lactis AD011] gi|240249521|gb|ACS46461.1| bifunctional short chain isoprenyl diphosphatesynthase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251089|gb|ACS48028.1| bifunctional short chain isoprenyl diphosphatesynthase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794118|gb|ADG33653.1| bifunctional short chain isoprenyl diphosphatesynthase [Bifidobacterium animalis subsp. lactis V9] Length = 366 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 35/210 (16%) Query: 49 GGKKIRSFLVTEC----ASLFNVNHLTALRV-----GAAIECIHCYSLIHDDLPSMDNGY 99 GGK++R+ L + A + ++R AIE +L+HDDL +D+ Sbjct: 52 GGKRLRALLTLDAYDVLAGAPDSTQSRSVRTKVLDFACAIEVFQTAALVHDDL--IDDSD 109 Query: 100 IRRGKPTVHIQYDEVTA---------IIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLS 149 +RRGKP+ H ++ G+ L T I+ T + ++ R + LS Sbjct: 110 LRRGKPSAHCALTSFAGARSIGRGLGLMLGDMLATACTLIMEDASTGMVEHRRLVEAFLS 169 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFACESGAIMAHA 202 + H++ + GQ+LD+ E +D+ Q + + KT + A A +A Sbjct: 170 MQHDVEV-----GQVLDLAIERMPLDDPQALAEASLDVFRWKTASYTTIAPLMLAFLASG 224 Query: 203 SQNEKERLRC--FGENLGIIFQLADDLLDC 230 +E L C G LG FQLADDLLD Sbjct: 225 MTSEAANLHCHAIGLPLGQAFQLADDLLDV 254 >gi|325182786|emb|CCA17241.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 452 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 27/202 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHLT-----------------ALRVGAAIECIHCYSLIHDD 91 GGKK+R +V + VN L+ R+ E IH SL+HDD Sbjct: 159 GGKKVRPTMVLLMSQAAEVNRLSNELPLPSSQSKEFTMAAQQRLAEITEMIHTASLLHDD 218 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +D +RRG +V+ + + +I+AG+ LL + ++ +L++ +LM ++ Sbjct: 219 V--IDEAEMRRGIQSVNRVFGDKLSILAGDFLLARSSVCLA----RLRNVKVVELMSTII 272 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKER 209 ++ ++G + QM ++Q+ + ++K KT +LM +C++ + + E Sbjct: 273 EHL-VKGEVM-QMRNVQNRSNISLLEYYLRKNYYKTASLMANSCKAALTLGQHTDYVCEM 330 Query: 210 LRCFGENLGIIFQLADDLLDCE 231 +G +LG+ FQL DD+LD E Sbjct: 331 GFAYGRHLGLAFQLIDDVLDYE 352 >gi|68164585|gb|AAY87314.1| predicted geranylgeranyl diphosphate synthase [uncultured bacterium BAC17H8] Length = 341 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 11/182 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R+ + A NV+ AL AAIE +H SLIHDD+ D +RR +P V Sbjct: 56 GKMLRAKMALRAADHLNVDRYAALHWAAAIEVLHNASLIHDDI--CDGDRLRRERPAVWS 113 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDI 167 Y A+ G+ L+ +FE+ + + + + +++ TH ++ G+ D+ Sbjct: 114 VYGRDVALTLGDWLVALSFELAAEAAQRAQTPMLVKIL--ATH---MKTTTDGEAREFDV 168 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 Q D KT L+ E A MA + CF LG +Q+A+D+ Sbjct: 169 Q-PVRDWDHYLKGAGDKTAPLLTAPLEGVAAMALHGGSAPIIGDCF-RALGNAYQIANDI 226 Query: 228 LD 229 L+ Sbjct: 227 LN 228 >gi|163847417|ref|YP_001635461.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl] gi|222525266|ref|YP_002569737.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl] gi|163668706|gb|ABY35072.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl] gi|222449145|gb|ACM53411.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl] Length = 345 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 6/182 (3%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR LV + + AL + A I+ +H +SLIHDD+ D+ +RRG+ T+ Sbjct: 54 GKLIRPQLVLLACAAAGGDPQQALPLAAGIQLLHDFSLIHDDIE--DDSAMRRGRRTLWH 111 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 + I AG+ + A I + R +L I L+ + GQ LD+ Sbjct: 112 IWGLAHGINAGDAMFVIAHLAIHRLSERGLPAERVLSILRRFDEIILR-ICEGQYLDLSF 170 Query: 169 --DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D I + KT AL+ A E GA A A L FG +G+ FQ+ DD Sbjct: 171 EGDLSITPADYLTMIGGKTAALIAGAAELGARAAGADGETVAALADFGRAVGLAFQIEDD 230 Query: 227 LL 228 +L Sbjct: 231 IL 232 >gi|71664964|ref|XP_819457.1| polyprenyl synthase [Trypanosoma cruzi strain CL Brener] gi|70884759|gb|EAN97606.1| polyprenyl synthase, putative [Trypanosoma cruzi] Length = 747 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 12/202 (5%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L +R+ + GGK R+F + C++ + ++ R E H SLI DD+ Sbjct: 438 DTLFLPVRFLIDRGGKCWRTFFLFACSNALSRDYADTSRCVIITELGHVGSLIIDDIE-- 495 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNG--LLTYAFEIISS-PKTQLKD--NIRSQLMLSL 150 D +RRG H+++ TAI AG ++ F +SS P + K + ++M + Sbjct: 496 DGSSVRRGGKAAHVEFGTPTAINAGTACFFMSVPFADVSSLPAEKAKRFYELYFEMMKAA 555 Query: 151 THNIGLQ----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 GL G L ++ + E + I KTGA+ C ++ S+ Sbjct: 556 HAGQGLDIRGLGYLMPDVVRTGETKALEDALKAIHTCKTGAICGAICSFACVLTDTSEEV 615 Query: 207 KERLRCFGENLGIIFQLADDLL 228 + FG+ +G+ +Q+ DD+L Sbjct: 616 TLAMEEFGKAIGLAYQIIDDVL 637 >gi|115739673|ref|XP_781598.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115924911|ref|XP_001192439.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 300 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 29/175 (16%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY---AFEI 130 ++ E IH SL+HDD+ +D RRGK +++ + + +I+AG+ +L+ A Sbjct: 49 KIAMITEMIHTASLMHDDV--IDAADTRRGKTSINELFGQRKSILAGDFVLSISSQALAR 106 Query: 131 ISSP------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 I P T ++D ++ + M LG + D ++E + M K Sbjct: 107 IGDPDVVIVLSTVIEDLVKGEFM-----------QLGSK--DNENERF--SHYLMKTYKK 151 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 T +LM +C + A++A S E +G N+G+ FQL DD+LD C++ + K Sbjct: 152 TASLMAHSCRAVAMLADCSPEVCEIAYQYGRNIGMAFQLVDDILDFVSCDDAMGK 206 >gi|315282959|ref|ZP_07871252.1| heptaprenyl diphosphate synthase component II [Listeria marthii FSL S4-120] gi|313613406|gb|EFR87257.1| heptaprenyl diphosphate synthase component II [Listeria marthii FSL S4-120] Length = 324 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD+ + +RRG+ T+ Sbjct: 47 GGKRIRPMFVCLSARLAAEADFDAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 104 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 105 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 155 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 156 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|308234849|ref|ZP_07665586.1| polyprenyl synthetase [Gardnerella vaginalis ATCC 14018] Length = 360 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 36/212 (16%) Query: 49 GGKKIRSFLVTEC--ASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R++L E A N + TA L V A+E +L+HDD+ +D +RR Sbjct: 51 GGKRLRAYLALEAFDAVRGNCSKDTAYCAMLDVACALEVFQTAALVHDDI--IDESALRR 108 Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--MLSLT 151 G+P+ + + ++ G+ L T +F+I T L+ N + L ++ Sbjct: 109 GRPSAYCALSKACNSKHIGIGLGLMLGDILATQSFDITRKACTNLR-NPQEVLGEFANMQ 167 Query: 152 HNIGLQGMLGGQMLDIQDEFID--------ETQVFMIQKMKTGALMCFACES-GAIMAHA 202 N+G+ GQ+LD+ E + E+ + + + KT + A + G + A Sbjct: 168 RNVGI-----GQVLDLSIEMMSLKNPKKLAESSINVF-RWKTASYTTIAPLALGFLSAGL 221 Query: 203 SQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 ++N +L GE LGI FQ+ADDL+D D Sbjct: 222 NKNYAIKLANDIGEPLGIAFQIADDLIDIVSD 253 >gi|307128579|ref|YP_003880609.1| polyprenyl synthetase [Candidatus Sulcia muelleri CARI] gi|306483041|gb|ADM89911.1| polyprenyl synthetase [Candidatus Sulcia muelleri CARI] Length = 326 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 40/200 (20%) Query: 48 LGGKKIRS---FLVTE-----CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + GK IR FL+T+ C +++ +L +E +H SLIHDD+ +D Sbjct: 45 IKGKYIRPIFIFLITKMLGNICKKTYDLAYL--------VELMHTASLIHDDV--IDFST 94 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQG 158 RRG +++ + TA+I G+ + + S +K+N + L ++S T ++ Sbjct: 95 TRRGVLSINAIWQNKTAVIFGDYIFS------KSLNIAIKNNYKDYLNIISKT----IEK 144 Query: 159 MLGGQMLDIQ-------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 M G++ I+ +++I E +F KT ++ CE GA + + ++ Sbjct: 145 MSEGEIFQIEYFHKMNINKYIYEKIIFK----KTAIMIGACCEGGARSINKKKKIILEIK 200 Query: 212 CFGENLGIIFQLADDLLDCE 231 FGE G+ FQ+ DDLLD E Sbjct: 201 KFGELAGMAFQIKDDLLDYE 220 >gi|311114488|ref|YP_003985709.1| putative bifunctional short chain isoprenyl diphosphate synthase [Gardnerella vaginalis ATCC 14019] gi|310945982|gb|ADP38686.1| probably bifunctional short chain isoprenyl diphosphate synthase [Gardnerella vaginalis ATCC 14019] Length = 366 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 36/212 (16%) Query: 49 GGKKIRSFLVTEC--ASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R++L E A N + TA L V A+E +L+HDD+ +D +RR Sbjct: 57 GGKRLRAYLALEAFDAVRGNCSKDTAYCAMLDVACALEVFQTAALVHDDI--IDESALRR 114 Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--MLSLT 151 G+P+ + + ++ G+ L T +F+I T L+ N + L ++ Sbjct: 115 GRPSAYCALSKACNSKHIGIGLGLMLGDILATQSFDITRKACTNLR-NPQEVLGEFANMQ 173 Query: 152 HNIGLQGMLGGQMLDIQDEFID--------ETQVFMIQKMKTGALMCFACES-GAIMAHA 202 N+G+ GQ+LD+ E + E+ + + + KT + A + G + A Sbjct: 174 RNVGI-----GQVLDLSIEMMSLKNPKKLAESSINVF-RWKTASYTTIAPLALGFLSAGL 227 Query: 203 SQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 ++N +L GE LGI FQ+ADDL+D D Sbjct: 228 NKNYAIKLANDIGEPLGIAFQIADDLIDIVSD 259 >gi|156093832|ref|XP_001612954.1| prenyl transferase [Plasmodium vivax SaI-1] gi|148801828|gb|EDL43227.1| prenyl transferase, putative [Plasmodium vivax] Length = 522 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 23/168 (13%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ AA E IH SL+HDD+ +D+ RRG P +H +Y +I++G+ LL A + + Sbjct: 251 KIIAASEIIHMGSLLHDDV--IDDSNNRRGAPALHKKYGNKISILSGDFLLARASSVFAG 308 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKM-KTGALM 189 Q+ + + + ++ G++L +F D + + I+ KT +L Sbjct: 309 TGC-------PQICRRFAYVV--ESLIKGELLQTNLKFNNIEDALKTYFIKTYHKTASLF 359 Query: 190 C--FACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLDCEED 233 FAC I + +NEK CF G ++G+ FQL DD LD + D Sbjct: 360 SHLFAC----IAILSFKNEKVIELCFNLGLHIGMAFQLYDDYLDYKPD 403 >gi|145500940|ref|XP_001436453.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124403592|emb|CAK69056.1| unnamed protein product [Paramecium tetraurelia] Length = 366 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 85/184 (46%), Gaps = 10/184 (5%) Query: 50 GKKIRSFLVTECASLF--NVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GK IR L A+ N H R+ AA IE +H SL+HDD+ +D RRG P+ Sbjct: 81 GKLIRPMLNLLYANHIEKNSQHTEQQRIWAAVIEILHVASLVHDDI--LDASDTRRGIPS 138 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 H + + A + N L+ A IS I SQ+M +LT+ LQ M + Sbjct: 139 SHTIFGKHRATFSANYLIGRAGRKISELDDIRMFQIYSQIMDNLTNGEYLQAMKQKSFHN 198 Query: 167 IQDEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 F Q +MI+ KT AL+ + + + + E+ G +LG+ FQ+ D Sbjct: 199 ----FEITLQNYMIKTYYKTAALIANSLQGVCQLTNIKDEICEKSFNIGLHLGVAFQIID 254 Query: 226 DLLD 229 D+LD Sbjct: 255 DVLD 258 >gi|302338112|ref|YP_003803318.1| polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293] gi|301635297|gb|ADK80724.1| Polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293] Length = 322 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GK +R + A + A + AAIE +H +LIHDD+ +D+ RRG P Sbjct: 42 LAQGKMLRPSFLLLTARCGKFSKKKAYDIAAAIEMLHIATLIHDDV--IDDADTRRGVPA 99 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 VH + AI+ G+ L + F I + T +N RS L+ +G Sbjct: 100 VHTKIGIRKAILMGDYLFSRCFSIAAQYAT--IENGRS-----LSTAVGFICQSEIDQST 152 Query: 167 IQDEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +F + ++ + KT AL + +GA + ++ + R G +G+ FQ+ D Sbjct: 153 KEYDFAISRRTYLRRIAGKTAALFLLSFHAGASQSKMNKTQVMWARRAGYAIGMAFQIID 212 Query: 226 DLLD 229 D+LD Sbjct: 213 DILD 216 >gi|116873372|ref|YP_850153.1| heptaprenyl diphosphate synthase component II [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742250|emb|CAK21374.1| heptaprenyl diphosphate synthase component II [Listeria welshimeri serovar 6b str. SLCC5334] Length = 321 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD+ + +RRG+ T+ Sbjct: 44 GGKRIRPMFVCLSARLSPDADFGAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G I++ S+ + ++L FG +G+ FQ+ Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGIVSGQSEADYQKLYRFGYYVGMAFQIT 212 Query: 225 DDLLD 229 DD+LD Sbjct: 213 DDVLD 217 >gi|319440242|ref|ZP_07989398.1| putative polyprenyl diphosphate synthase [Corynebacterium variabile DSM 44702] Length = 373 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 26/176 (14%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVTA 116 LR ++E I +LIHDD+ +D+ RRG+PT H + Y E A Sbjct: 91 LRAVGSLEFIQACALIHDDI--IDHSDTRRGRPTTHRRFEASHRGNGWSGDAVGYGESQA 148 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176 I+ G+ +A +++ R++ ++ GQMLDI E Sbjct: 149 ILVGDLAFAWADDMLVDSGVDAASLARAREPWRKMRTE----VIAGQMLDIALENSGSED 204 Query: 177 VFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 M +K+ T + E GA + A + LR G +GI FQL DD L Sbjct: 205 PAMSEKVNTYKTAAYTVERPLHLGAALGDADARTVDLLRTAGREIGIAFQLEDDHL 260 >gi|289178875|gb|ADC86121.1| Dimethylallyltransferase [Bifidobacterium animalis subsp. lactis BB-12] Length = 376 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 35/209 (16%) Query: 49 GGKKIRSFLVTEC----ASLFNVNHLTALRV-----GAAIECIHCYSLIHDDLPSMDNGY 99 GGK++R+ L + A + ++R AIE +L+HDDL +D+ Sbjct: 62 GGKRLRALLTLDAYDVLAGAPDSTQSRSVRTKVLDFACAIEVFQTAALVHDDL--IDDSD 119 Query: 100 IRRGKPTVHIQYDEVTA---------IIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLS 149 +RRGKP+ H ++ G+ L T I+ T + ++ R + LS Sbjct: 120 LRRGKPSAHCALTSFAGARSIGRGLGLMLGDMLATACTLIMEDASTGMVEHRRLVEAFLS 179 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFACESGAIMAHA 202 + H++ + GQ+LD+ E +D+ Q + + KT + A A +A Sbjct: 180 MQHDVEV-----GQVLDLAIERMPLDDPQALAEASLDVFRWKTASYTTIAPLMLAFLASG 234 Query: 203 SQNEKERLRC--FGENLGIIFQLADDLLD 229 +E L C G LG FQLADDLLD Sbjct: 235 MTSEAANLHCHAIGLPLGQAFQLADDLLD 263 >gi|84496184|ref|ZP_00995038.1| putative polyprenyl synthase / dimethylallyltranstransferase [Janibacter sp. HTCC2649] gi|84382952|gb|EAP98833.1| putative polyprenyl synthase / dimethylallyltranstransferase [Janibacter sp. HTCC2649] Length = 366 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 43/222 (19%) Query: 39 LLSAIRYALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL + L GGK++R+ FL + + +R+ A+E +LIHDD+ MD+ Sbjct: 44 LLDRVGSLLAGGKRLRAAFLYWGHRAAGRADSDELVRLATAMEFFQAAALIHDDV--MDD 101 Query: 98 GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 RRG P H ++ AI+AGN LT+ E++++ ++D Sbjct: 102 SDTRRGMPAAHRALAAVHTERGWGGDDARFGVAGAILAGNLCLTWTDELVATSGLGVEDL 161 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQD-----------EFIDETQVFMIQKMKTGALMC 190 R +++ ++ GQ LD+ D E I+ Q + K Sbjct: 162 ARGRVVFDRMRTQ----LMAGQFLDVVDSVRPWDGLPASERIERAQRVIRYKSAK----- 212 Query: 191 FACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E GA + + L +G +LG FQL DDLL Sbjct: 213 YTVEHPLLIGATAGGLGEADLAHLSSYGLDLGHAFQLRDDLL 254 >gi|307719391|ref|YP_003874923.1| polyprenyl synthetase [Spirochaeta thermophila DSM 6192] gi|306533116|gb|ADN02650.1| putative polyprenyl synthetase [Spirochaeta thermophila DSM 6192] Length = 376 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 30/211 (14%) Query: 50 GKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK +R LV A + RVGAA+E L+HDD+ MD +RRG P++ Sbjct: 73 GKLVRGALVWAGAGVCGGAPEEWCARVGAALELFQSGLLVHDDV--MDRDRVRRGGPSMF 130 Query: 109 IQYD---------------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 QY+ E A+ G+ F +++ + +R L+ + Sbjct: 131 AQYEGRAGEEGVREARRVGEALAVCVGDVAFFLGFGLLAG--VGRGEAMRDALLRCVAEE 188 Query: 154 IGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKE 208 G+ QM D+ E + V + + KTG GA++A A + + Sbjct: 189 YARVGVA--QMDDVWYGAAGEGVRLEDVLRVYRYKTGRYTFSVPLSLGALLAGADEGVRG 246 Query: 209 RLRCFGENLGIIFQLADD---LLDCEEDLPK 236 L GE LG++FQ+ DD L EE++ K Sbjct: 247 ALEEVGELLGVVFQIRDDELGLFGSEEEIGK 277 >gi|38234187|ref|NP_939954.1| putative geranylgeranyl pyrophosphate synthase [Corynebacterium diphtheriae NCTC 13129] gi|38200449|emb|CAE50137.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium diphtheriae] Length = 374 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 40/216 (18%) Query: 43 IRYALLGGKKIR------SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 + Y L GGK+IR F+ + + + L ++E I +LIHDD+ +D Sbjct: 55 VEYVLGGGKRIRPTYAWAGFVASGGLTNKTEDPGAVLTAIGSLELIQACALIHDDI--ID 112 Query: 97 NGYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 RRG PTVH ++ E AI+ G+ + +A ++ + Sbjct: 113 ASDTRRGNPTVHRVAERTHAESHRLGDSARFGESIAILVGDLAMVWADDM-------FHN 165 Query: 141 NIRSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES- 195 + S + N +GM +GGQ+LDI E + + + + + E Sbjct: 166 SGLSDAAIRRASN-AWRGMRTEVIGGQLLDIYIESTGSESIELAETVNRFKTAAYTIERP 224 Query: 196 ---GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A LR +G ++G+ FQL DDLL Sbjct: 225 LHIGAALAGADDQTVHCLRNYGRDIGLAFQLRDDLL 260 >gi|71422877|ref|XP_812265.1| polyprenyl synthase [Trypanosoma cruzi strain CL Brener] gi|70877026|gb|EAN90414.1| polyprenyl synthase, putative [Trypanosoma cruzi] Length = 747 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 12/202 (5%) Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D L +R+ + GGK R+F C++ + ++ + E H SLI DD+ Sbjct: 438 DTLFLPVRFLIDRGGKYWRTFFFFACSNALSRDYADTSKCIIITELGHVGSLIIDDIE-- 495 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNG--LLTYAFEIISS-PKTQLKD--NIRSQLMLSL 150 D +RRG H+++ TAI AG ++ F ++S P + K + ++M + Sbjct: 496 DGSSVRRGGKAAHVEFGTPTAINAGTACFFMSVPFAGVNSLPAEKAKRFYELYFEMMKAA 555 Query: 151 THNIGLQ----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 GL G L ++ + E V I KTGA+ C ++ S+ Sbjct: 556 HAGQGLDIRGLGYLMPDVVRTGETKALEDAVKAIHTCKTGAICGAICSFACVLTDTSEEV 615 Query: 207 KERLRCFGENLGIIFQLADDLL 228 + + FG+ +G+ +Q+ DD+L Sbjct: 616 TQAMEEFGKAIGLAYQIIDDVL 637 >gi|298709043|emb|CBJ30993.1| Geranylgeranyl pyrophosphate synthetase, chloroplast precursor [Ectocarpus siliculosus] Length = 142 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 44/66 (66%) Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 L+ +D+ + ++ I + KTGAL+ AC +GA++ AS + + + F E++G+ FQ+A Sbjct: 9 LECEDKDVGLEELRWIHRHKTGALLKVACTAGALLGGASDKDVKNMEVFSESIGLAFQVA 68 Query: 225 DDLLDC 230 DD+LDC Sbjct: 69 DDILDC 74 >gi|212715644|ref|ZP_03323772.1| hypothetical protein BIFCAT_00544 [Bifidobacterium catenulatum DSM 16992] gi|212661011|gb|EEB21586.1| hypothetical protein BIFCAT_00544 [Bifidobacterium catenulatum DSM 16992] Length = 394 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 28/205 (13%) Query: 49 GGKKIRSFLVTECASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L + F + L + A+E +L+HDD+ +D+ +RR Sbjct: 83 GGKRLRALLTLDSFRAFASEDVLERDFDALLDLACAVEVFQTGALVHDDI--IDDSDLRR 140 Query: 103 GKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 GKP+ H + T + G+GL +++++ + D S+L L M Sbjct: 141 GKPSAHRAFSTDTHSETIGHGLGIMLGDMLATASVDIADKAASKLTYGSNVVAALLNMHR 200 Query: 162 ----GQMLDIQ---------DEFIDET-QVFMIQKMKTGALMCFA-CESGAIMAHASQNE 206 GQ+LD+ +E ++ + VF + KT + A E G + A S+++ Sbjct: 201 EVEVGQVLDLAVELNPLNDPNELVEASLNVF---RWKTASYTTIAPLEFGMLAAGLSKDD 257 Query: 207 KER-LRCFGENLGIIFQLADDLLDC 230 R G LG+ FQLADDLLD Sbjct: 258 ARRHALAVGLPLGLAFQLADDLLDV 282 >gi|322379568|ref|ZP_08053905.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS1] gi|321147962|gb|EFX42525.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS1] Length = 301 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 18/181 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +RS L+ S NH + A IE I SL+HDD+ +D+ RRG P+++ Sbjct: 35 GKMLRSQLILAICS----NHPQIVDFCAIIEMIQSASLLHDDV--IDHAQTRRGNPSLNA 88 Query: 110 QYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ + AF E+ + K ++ +S + LS +QG L Sbjct: 89 TFGNTNAIMLGDVFYSKAFCELANFSKEIVQLIAQSVVELSRGEIKDVQGCLA------- 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 F +++ A + A GA + E + R FG + G+ FQ+ DDLL Sbjct: 142 --FNPNKAIYLDTIEDKSASLIAASSCGAALLQGL--EPSKYRDFGRHFGMAFQMVDDLL 197 Query: 229 D 229 D Sbjct: 198 D 198 >gi|284995517|ref|YP_003417285.1| hypothetical protein LM5923_2082 [Listeria monocytogenes 08-5923] gi|284060984|gb|ADB71923.1| hypothetical protein LM5923_2082 [Listeria monocytogenes 08-5923] Length = 321 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD+ + +RRG+ T+ Sbjct: 44 GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 212 Query: 225 DDLLD 229 DD+LD Sbjct: 213 DDVLD 217 >gi|224498620|ref|ZP_03666969.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes Finland 1988] Length = 274 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 18/195 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD+ + +RRG+ T+ Sbjct: 47 GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 104 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 105 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 155 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 156 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 215 Query: 225 DDLLD---CEEDLPK 236 DD+LD E++L K Sbjct: 216 DDVLDFVGTEKELGK 230 >gi|254434422|ref|ZP_05047930.1| polyprenyl synthetase family [Nitrosococcus oceani AFC27] gi|207090755|gb|EDZ68026.1| polyprenyl synthetase family [Nitrosococcus oceani AFC27] Length = 346 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 79/188 (42%), Gaps = 18/188 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GK+IR LV F +N AL AIECI SLIHDD +D IRR Sbjct: 59 GKRIRGCLV------FLMNQTQEGKLEDALPRAVAIECIQAASLIHDDY--LDEDVIRRK 110 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 +P A++ G+ + +A I S + D ++ N Q + Sbjct: 111 RPATWTVEGPRRAVLLGD--IMFATAIQSMAELSKDDGATVARAIATVANGAYQELFWQT 168 Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + + +++ I +KTGAL AC+ GAI A A + FG G + Sbjct: 169 KTRERRLHKLLEKNLYDHIIYLKTGALFGAACQLGAIAAGALREIPTLAYAFGARTGEAY 228 Query: 222 QLADDLLD 229 Q+ADDL D Sbjct: 229 QIADDLED 236 >gi|308803076|ref|XP_003078851.1| geranyl diphosphat synthase (ISS) [Ostreococcus tauri] gi|116057304|emb|CAL51731.1| geranyl diphosphat synthase (ISS) [Ostreococcus tauri] Length = 298 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 8/156 (5%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +DN RRG ++++ AI+AG+ LL A ++S Sbjct: 41 RLAEIAEMIHVASLLHDDV--LDNAATRRGLRALNLEVGNKLAILAGDFLLARASVTLAS 98 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + + S+++ L +Q + L + ++ +T KT +L+ + Sbjct: 99 LRNTEVIELLSRVLEHLVAGEVMQMTAKPESLSSMEHYVKKTY------YKTASLIANSS 152 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ A++ + + +G+NLG+ FQ DD+LD Sbjct: 153 KAIALLGGHGEKSADLAYDYGKNLGLAFQFQDDVLD 188 >gi|315453024|ref|YP_004073294.1| Polyprenyl synthetase family [Helicobacter felis ATCC 49179] gi|315132076|emb|CBY82704.1| Polyprenyl synthetase family [Helicobacter felis ATCC 49179] Length = 295 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 25/195 (12%) Query: 47 LLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 LLG GK +RS L+ H + A IE I SL+HDD+ +DN RR Sbjct: 27 LLGQGKMLRSKLILAICP----EHPQLIDFCAIIEMIQSASLLHDDV--IDNAQTRRAHD 80 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 +++ + AI+ G+ AF ++ T++ + +M + G++ Sbjct: 81 SINHIFGNQNAIMLGDVFYAKAFLELTKLDTEIAQLVAHSVM----------ELSRGEIK 130 Query: 166 DIQ--DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D++ D F D T+ I + K+ +LM +C A++ + + R FG N GI FQ Sbjct: 131 DVRASDTFHTDITRYIDIIQDKSASLMVASCAGAALLGGL---DSQAYRTFGLNFGIAFQ 187 Query: 223 LADDLLDCEEDLPKK 237 + DDLLD + PK+ Sbjct: 188 IMDDLLDITQ--PKE 200 >gi|77165696|ref|YP_344221.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707] gi|76884010|gb|ABA58691.1| Polyprenyl synthetase [Nitrosococcus oceani ATCC 19707] Length = 341 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 79/188 (42%), Gaps = 18/188 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GK+IR LV F +N AL AIECI SLIHDD +D IRR Sbjct: 54 GKRIRGCLV------FLMNQTQEGKLEDALPRAVAIECIQAASLIHDDY--LDEDVIRRK 105 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 +P A++ G+ + +A I S + D ++ N Q + Sbjct: 106 RPATWTVEGPRRAVLLGD--IMFATAIQSMAELSKDDGATVARAIATVANGAYQELFWQT 163 Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + + +++ I +KTGAL AC+ GAI A A + FG G + Sbjct: 164 KTRERRLHKLLEKNLYDHIIYLKTGALFGAACQLGAIAAGALREIPTLAYAFGARTGEAY 223 Query: 222 QLADDLLD 229 Q+ADDL D Sbjct: 224 QIADDLED 231 >gi|284802375|ref|YP_003414240.1| hypothetical protein LM5578_2131 [Listeria monocytogenes 08-5578] gi|284057937|gb|ADB68878.1| hypothetical protein LM5578_2131 [Listeria monocytogenes 08-5578] Length = 321 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD+ + +RRG+ T+ Sbjct: 44 GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 212 Query: 225 DDLLD 229 DD+LD Sbjct: 213 DDVLD 217 >gi|322379645|ref|ZP_08053966.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS5] gi|321147939|gb|EFX42518.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS5] Length = 301 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 18/181 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +RS L+ S NH + A IE I SL+HDD+ +D+ RRG P+++ Sbjct: 35 GKMLRSQLILAICS----NHPQIVDFCAIIEMIQSASLLHDDV--IDHAQTRRGNPSLNA 88 Query: 110 QYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + AI+ G+ + AF E+ + K ++ +S + LS +QG L Sbjct: 89 TFGNTNAIMLGDVFYSKAFCELANFSKEIVQLIAQSVVELSRGEIKDVQGCLA------- 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 F +++ A + A GA + E + R FG + G+ FQ+ DDLL Sbjct: 142 --FNPNKAIYLDTIEDKSASLIAASSCGAALLQGL--EPSKYRDFGRHFGMAFQMVDDLL 197 Query: 229 D 229 D Sbjct: 198 D 198 >gi|302539632|ref|ZP_07291974.1| putative mucin-2 [Streptomyces hygroscopicus ATCC 53653] gi|302457250|gb|EFL20343.1| putative mucin-2 [Streptomyces himastatinicus ATCC 53653] Length = 468 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 30/199 (15%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 G+ R ++ L + + + A E +H +L+ DD+ D+ RRG+P+VH Sbjct: 150 GRSWRPYVAAAVLCLLDADPEPYRPLTAVTELLHLSALVIDDI--QDDSPTRRGRPSVHE 207 Query: 110 QYDEVTAIIAGNGLLTYAFEII------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + AI AG L Y F+ + ++P+T L+ +L L L+ GQ Sbjct: 208 VFGTAPAITAGT-LGYYTFDALIQRVPQAAPETMLRIY---RLYLR-----DLRAAHAGQ 258 Query: 164 MLDIQ------DEFIDE-------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 LDI DE + +V ++KTG L+ E A++ A + + + + Sbjct: 259 ALDIAGHHAAFDEAVTSGDARPLLDEVRTAHRLKTGMLVRSTAEVSALLGGADERQLDAI 318 Query: 211 RCFGENLGIIFQLADDLLD 229 + E +G +Q+ DD+ D Sbjct: 319 CRYFEAVGTAYQITDDVAD 337 >gi|315425225|dbj|BAJ46894.1| polyprenyl synthetase [Candidatus Caldiarchaeum subterraneum] Length = 353 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 76/187 (40%), Gaps = 13/187 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R L + A E IH +LI DD+ D +RRG+P +H Sbjct: 66 GGKRWRPALTVIVYEALGGGDPGIYILAAVPEIIHNATLIVDDVE--DGSLMRRGEPCIH 123 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y AI AGN Y + +L N+ + + + + GQ +DI Sbjct: 124 RIYGIDIAINAGNA---YYYIPAYLAAKKLPKNMATLFLEKYVETMTRLSL--GQTMDIV 178 Query: 169 DEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I E + KTGAL FA E AI A + E L FGE +G FQ+ Sbjct: 179 WHRGLVTDITEEHYLQMAAFKTGALSRFAVELAAIYA-GRGDLLEELGRFGEAVGTAFQI 237 Query: 224 ADDLLDC 230 DD L+ Sbjct: 238 QDDYLNI 244 >gi|117928903|ref|YP_873454.1| polyprenyl synthetase [Acidothermus cellulolyticus 11B] gi|117649366|gb|ABK53468.1| Polyprenyl synthetase [Acidothermus cellulolyticus 11B] Length = 339 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 13/183 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +RS L A + A+E +H +SL+HDD+ MD RR +PT Sbjct: 53 GGKAVRSALAVLSAQAAGAPAAVGIPGAVAVELVHNFSLLHDDV--MDGDEERRHRPTAW 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++AG+ LL AF+++ + + + + S T Q ++ GQ D+ Sbjct: 111 TVFGRSAALLAGDALLGLAFDVLLDAE---HGDAAQRCLGSAT-----QELIAGQFDDLD 162 Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E + + + KT ALM A GA +A A L FG +LG+ FQL D Sbjct: 163 FETRLDVSLDECVSMAGAKTAALMACASSIGARLAGADPALVNALDDFGRHLGLAFQLVD 222 Query: 226 DLL 228 DLL Sbjct: 223 DLL 225 >gi|168001212|ref|XP_001753309.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695595|gb|EDQ81938.1| predicted protein [Physcomitrella patens subsp. patens] Length = 317 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 18/161 (11%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG +++ A++AG+ LL A ++S Sbjct: 60 RIAEITEMIHVASLLHDDV--LDHADTRRGISSLNHVMGNKLAVLAGDFLLARASVALAS 117 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMC 190 + + SQ+ L+ ++ G+++ + E D + + + +QK KT +LM Sbjct: 118 LRNTEVVELLSQV---------LEHLVTGEIMQLSVEDKDMSNMDYYMQKTFYKTASLMA 168 Query: 191 FACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLD 229 +C++ A++A Q E L F G +LG+ +QL DD LD Sbjct: 169 NSCKAIAVLA--GQPEDVALLAFNYGRHLGLAYQLVDDALD 207 >gi|21955862|emb|CAD42868.1| solanesyl pyrophosphate synthase [Mucor circinelloides f. lusitanicus] Length = 471 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 19/168 (11%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-- 128 T R+ E IH SL+HDD+ +D RR P+ + + A++ G+ LL A Sbjct: 210 TQRRLAEISEMIHTASLLHDDV--IDASMTRRNLPSANASFGNKMAVLGGDFLLARASLA 267 Query: 129 -------EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 E I T + + + + M G G + + L D ++++T Sbjct: 268 LARLRNAECIELMATCIANLVEGEFMQLRNTKEGESGKV--KKLSTFDHYMEKTY----- 320 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 MKTG+L+ +C++ A++ +++ FG+NLG+ FQL DD+LD Sbjct: 321 -MKTGSLIAQSCKASAVLGGSTKEVANIAYDFGKNLGLAFQLVDDMLD 367 >gi|321473148|gb|EFX84116.1| hypothetical protein DAPPUDRAFT_47316 [Daphnia pulex] Length = 302 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 16/160 (10%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +V E +H L HDD+ +D+ RR KPT++ + +I AG+ +L A E IS Sbjct: 50 KVAQVAEMVHGTCLYHDDV--IDDAIKRRAKPTINFLCGQKKSIWAGDFVLGRALETIS- 106 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGML----GGQMLDIQDEFIDETQVFMIQKMKTGALM 189 Q+ +N L+ + N+ ++ G + ++ID+T KT ++ Sbjct: 107 ---QISNNKVCILLTRMIQNVVTGELMQLDAGATEEERFSQYIDKT------FKKTASVF 157 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + C++ ++A A + FG LGI +QL D + D Sbjct: 158 AYPCQAVLVLAGADATLQTTAFEFGRQLGIAYQLVDGITD 197 >gi|108759001|ref|YP_629155.1| putative farnesyltranstransferase [Myxococcus xanthus DK 1622] gi|108462881|gb|ABF88066.1| putative farnesyltranstransferase [Myxococcus xanthus DK 1622] Length = 361 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 23/237 (9%) Query: 7 SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 + LQ ++T L +L L + + + L A Y L K++R LV L Sbjct: 20 AWLQLVQTEVETSLAELFELPDEAGLDVRWTQALTQARAYTLRPAKRLRPALVMAGHCLA 79 Query: 66 NVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----QYDEVTAI 117 + + R A +E +H + LIHDD+ D +RRG +H + E A+ Sbjct: 80 RGSAVVPSGLWRFAAGLELLHTFLLIHDDV--ADQAELRRGAAPLHRMLAPGRAGEDLAV 137 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 + G+ L A E++ + + H GQ LD+ +V Sbjct: 138 VVGDHLFARALEVMLGSGLTCVAGVVQYYLGVCRHTAA------GQYLDLDLGRAPLAEV 191 Query: 178 FMIQKMKTGAL------MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + Q ++ L C GA++ AS E L G ++G+ +QL DDLL Sbjct: 192 TLFQTLRVAHLKTARYGFCAPLVCGAMLGGASSGLVEELERVGRHVGLAYQLRDDLL 248 >gi|149924019|ref|ZP_01912402.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1] gi|149815102|gb|EDM74655.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1] Length = 366 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 19/187 (10%) Query: 49 GGKKIRSF--LVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GGK+ R L+ A+ + + L + AA E +H +L+HDD+ +D G RRG+ Sbjct: 84 GGKRFRPMATLLAAQAAGYTCDEAWNDTLTIAAAGELLHTATLLHDDV--IDEGEFRRGR 141 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 P + Y +++ G+ A + +S K ++ + L I Q Sbjct: 142 PAARLPYGNGLSVLTGDYCFARALQSVSRLGKAAATSSMADAVTLMAEGEI-------AQ 194 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQ 222 + + +D + ++ + KT AL+ + C + +AH + L +G +G FQ Sbjct: 195 LYAAGEWEVDLERYTLVIERKTAALIAW-CTA---VAHLVEPDAAAALARYGREVGFAFQ 250 Query: 223 LADDLLD 229 +ADD++D Sbjct: 251 IADDIID 257 >gi|258651230|ref|YP_003200386.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233] gi|258554455|gb|ACV77397.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233] Length = 326 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 17/190 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A + + + A +E IH +L HDD+ MD IRRG + Sbjct: 49 GGKRFRPLFTLVAAGVGPRPDAEEVVVASAVVELIHLATLYHDDV--MDEAQIRRGAKSA 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++D AI+ G+ L +A +++S +D +R +++ T ++ GQ + Sbjct: 107 NARWDNSIAILTGDFLFAHASRLVASLG---EDAVR---IIAET----FAELVTGQTRET 156 Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 DE + + KT +L+ I + A + LR +G +G+ FQ++ Sbjct: 157 VGPGPDEDPIDHHLRVLDEKTASLIDTCARYAGIFSGAPEEHVLALRRYGRAVGVAFQIS 216 Query: 225 DDLLD-CEED 233 DD+LD C D Sbjct: 217 DDILDICSTD 226 >gi|256826840|ref|YP_003150799.1| geranylgeranyl pyrophosphate synthase [Cryptobacterium curtum DSM 15641] gi|256582983|gb|ACU94117.1| geranylgeranyl pyrophosphate synthase [Cryptobacterium curtum DSM 15641] Length = 354 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 5/190 (2%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 +RY+ GGK+ R + + AL AAIE H +LIHDD+ D +RR Sbjct: 59 LRYSRNGGKRHRPLICFAACRAVGGDLDRALSAAAAIEHFHTAALIHDDI--ADEAELRR 116 Query: 103 GKPTVHIQYDEVTAIIAGN-GLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGM 159 G+P +H+ AI AG+ GL ++ +R S+L+ I Q + Sbjct: 117 GEPCLHLTEGLGLAINAGDLGLSLVNGTVMEDDALDDATKVRVVSELITMTRRTIEGQAL 176 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 G D + + E + M GAI+ ++ E E LR +G + G+ Sbjct: 177 DIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAIVGGGTEGEIEGLRNYGLDTGL 236 Query: 220 IFQLADDLLD 229 FQ+ DDLL+ Sbjct: 237 AFQIQDDLLN 246 >gi|321473072|gb|EFX84040.1| hypothetical protein DAPPUDRAFT_223125 [Daphnia pulex] Length = 378 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 16/160 (10%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 RV +E IH L HDD+ +DN RR +P+++ + +I+AG+ +L + II+ Sbjct: 127 RVCQVLEMIHAAGLYHDDV--IDNAESRRSRPSINNVWGVKKSILAGDFVLGRSMRIIA- 183 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALM 189 ++ + S L+ ++ +I + ++ ++E ++D+T KT +L+ Sbjct: 184 ---EINNEDVSILLNTMIDHIVIGEIMQLSAGATEEERFAHYVDKT------FKKTASLL 234 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +C++ +++A A + + G LG+ FQL DD+LD Sbjct: 235 AHSCQAVSVLAGADSDVQAMGFTLGRQLGMAFQLVDDILD 274 >gi|228470131|ref|ZP_04055040.1| polyprenyl synthetase [Porphyromonas uenonis 60-3] gi|228308269|gb|EEK17124.1| polyprenyl synthetase [Porphyromonas uenonis 60-3] Length = 87 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 40/57 (70%), Gaps = 2/57 (3%) Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 A+E H ++L+HDD+ MDN +RRGKP+V+ +Y AI++G+ +L A+++++ Sbjct: 24 AVALEVFHNFTLLHDDV--MDNSPVRRGKPSVYAKYGLTPAILSGDAMLILAYQMLT 78 >gi|255583629|ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223527725|gb|EEF29831.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 308 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 9/155 (5%) Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS- 144 + H+++P D +P H + ++ G+G++ +AFE+++ +DN Sbjct: 120 AFTHENIPLTDRPR-PSARPMFHHTFGPNIELLTGDGMIPFAFELLAQLNNPAQDNSDRI 178 Query: 145 -QLMLSLTHNIGLQGMLGGQMLDIQ------DEFIDETQVFMIQKMKTGALMCFACESGA 197 ++M+ ++ +G QGM+ GQ + Q DE + + K K GA A GA Sbjct: 179 LRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHVAWLRDVCKKKEGASHACAGACGA 238 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I+ ++ E E+LR +G +G I + + + EE Sbjct: 239 ILGGGNEEEIEKLRRYGLYVGTIQGIYNKVEGNEE 273 >gi|261415263|ref|YP_003248946.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371719|gb|ACX74464.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 334 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 23/214 (10%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV---TEC-ASLFNVNHLTALRVGAA 78 +++Q A + +DRL++ GK+IRS L+ C A +++ + AA Sbjct: 29 VIMQVAKNAPAGISDRLVTLFSRK---GKRIRSTLLCLLANCGAQKPDIDRVA--HACAA 83 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E +H SL+HDD+ +D +RRG+ T H ++ A++ G+ +L+ + + + + Sbjct: 84 VELLHLASLVHDDI--IDGTDVRRGQKTAHREWGTQVAVLIGDYVLSQSMRCVIDEQAR- 140 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACES 195 NI +++S + ++ G+++++ D + I KT AL+ A Sbjct: 141 --NI--PVIISDAAD----KLIIGEIMELDHCGDMSLSRKSYNEIIDGKTAALIDAAARI 192 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 G I+A Q + G + GI FQ+ DDLLD Sbjct: 193 GGILAGFDQPMVDECAKMGTHFGIAFQIIDDLLD 226 >gi|309812764|ref|ZP_07706503.1| polyprenyl synthetase [Dermacoccus sp. Ellin185] gi|308433281|gb|EFP57174.1| polyprenyl synthetase [Dermacoccus sp. Ellin185] Length = 402 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 100/256 (39%), Gaps = 63/256 (24%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT- 59 + GLPS + ++T++ DLL GGK +R LV Sbjct: 74 VTAGLPSSALVEASSLETLVRDLLAA----------------------GGKLVRPRLVRL 111 Query: 60 ------ECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111 EC + + T +RV AA E +H + L+ DD+ MD RRG PT H Q Sbjct: 112 GYLAARECTNPDDDPATTDAVVRVAAAFELLHLFGLLQDDV--MDASDTRRGTPTAHHQV 169 Query: 112 ---------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + A++AG+ A ++ + + D + ++ +T Sbjct: 170 RAAAAQPDGPDAARLGDSVAVLAGDLAFALANRLVRALPEHVADAWDAAVVELVT----- 224 Query: 157 QGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRC 212 GQ LD+ + +DE + K+GA E GA++A S L Sbjct: 225 -----GQRLDLVFAAEARLDEVSTRRVAHAKSGAYTVQRPLEIGALLAGESAPPTW-LSR 278 Query: 213 FGENLGIIFQLADDLL 228 FG LG F LADD++ Sbjct: 279 FGAALGEAFALADDII 294 >gi|170290882|ref|YP_001737698.1| polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174962|gb|ACB08015.1| Polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 289 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 29/220 (13%) Query: 22 DLLLQTA--SHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVG 76 DL L A ++M+ D L+ ++ GGK+IR FL+ E L A Sbjct: 34 DLALMEALRNNMENPFADPLIEFMK----GGKRIRPAILFLINEACGGGGSPELAA---- 85 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E IH SLIHDD+ + RRG P+ HI++ AI+ + +L+ EI+S Sbjct: 86 AAVELIHTASLIHDDIIDDSD--SRRGIPSFHIKHGTEMAILIADFILSIVLEIVS---- 139 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFA 192 + +D +L+ T + + G+M+++ + + I + K KT +L A Sbjct: 140 KYEDKRIGRLLSEATKLMSI-----GEMMEVILLRRGDPISVEDYLNVLKYKTASLFQTA 194 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 GA++A + E + +G LG+ +Q+ DDLLD E Sbjct: 195 SSLGALIA-GRDDLYEEMGLYGLYLGLSYQIRDDLLDWGE 233 >gi|313607945|gb|EFR84079.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes FSL F2-208] Length = 324 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD+ + +RRG+ T+ Sbjct: 47 GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 104 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 105 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 155 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 156 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQIT 215 Query: 225 DDLLD 229 DD+LD Sbjct: 216 DDVLD 220 >gi|217963918|ref|YP_002349596.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes HCC23] gi|217333188|gb|ACK38982.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes HCC23] gi|307571512|emb|CAR84691.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes L99] Length = 321 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD +D+ +RRG+ T+ Sbjct: 44 GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDD--VVDDADLRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQIT 212 Query: 225 DDLLD 229 DD+LD Sbjct: 213 DDVLD 217 >gi|294085694|ref|YP_003552454.1| polyprenyl synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665269|gb|ADE40370.1| Polyprenyl synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 340 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R+ + A L ++ AL +IE +H SLIHDD+ D +RRG+ V Sbjct: 56 GKMLRAKMALSAAKLLKIDQAAALHWSTSIEVLHNASLIHDDI--CDGDKMRRGRVAVWA 113 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 +Y A+ G+ L+ +FE+ + + + L+ L ++ IQ Sbjct: 114 KYGRDVALTLGDWLIALSFELAAEAAQRANTPM---LVKILAKHMATTTAGEAAEFSIQS 170 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLL 228 + I KT L+ E A MA H + + + +LG +Q+A+D+L Sbjct: 171 SY-SWDHYLRIAGDKTAPLLTAPLEGIAAMALHG--DAAGAIGSYFRHLGEAYQIANDIL 227 Query: 229 ---------DCEEDLPKK 237 DC DL ++ Sbjct: 228 NFRAGDGAADCGSDLARR 245 >gi|290892090|ref|ZP_06555086.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL J2-071] gi|290558213|gb|EFD91731.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL J2-071] Length = 321 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+IR V A L A++ AIE IH S++HDD +D+ +RRG+ T+ Sbjct: 44 GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDD--VVDDADLRRGRETI 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ A+ G+ L + E + T++KD +++ +T + G++ + Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152 Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D++ D++ ++ K KT L+ +C G +++ S+ + ++L FG +G+ FQ+ Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQIT 212 Query: 225 DDLLD 229 DD+LD Sbjct: 213 DDVLD 217 >gi|49259555|pdb|1VG3|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima A76yS77F MUTANT Length = 299 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H Y L+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLYFLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N +L + + IG M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|296206331|ref|XP_002750182.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like, partial [Callithrix jacchus] Length = 308 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 37/197 (18%) Query: 51 KKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRRG 103 K R +V A N++H + V A+ E IH SL+HDD+ +D+ RRG Sbjct: 27 KAFRPIIVALMARACNIHHNNSQHVQASQRTIALIAEMIHTASLVHDDV--IDDASSRRG 84 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYA---------FEIISSPKTQLKDNIRSQLMLSLTHNI 154 K TV + E A++AG+ +L+ A +IS ++D++RS+ + Sbjct: 85 KHTVDKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDSVRSEFL------- 137 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRC 212 LG + E +E ++K KT +L+ + ++ +++ E Sbjct: 138 ----QLGSK------ENENERFAHYLEKPFKKTASLIANSYKAVSVLGCPDPVVHEIAYQ 187 Query: 213 FGENLGIIFQLADDLLD 229 +G+N+GI FQL DD+LD Sbjct: 188 YGKNIGIAFQLIDDVLD 204 >gi|271965184|ref|YP_003339380.1| geranylgeranyl pyrophosphate synthase-like protein [Streptosporangium roseum DSM 43021] gi|270508359|gb|ACZ86637.1| Geranylgeranyl pyrophosphate synthase-like protein [Streptosporangium roseum DSM 43021] Length = 350 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 70/157 (44%), Gaps = 23/157 (14%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN-GLLTYAFEIISSPKTQLKDN 141 H +SL+HDD+ MD RR +P + AI+AG+ L + SP ++ Sbjct: 105 HDFSLLHDDI--MDGDLTRRHRPAAWSVFGVGEAILAGDVLLTLALDLLAGSPGLRV--- 159 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACESG 196 L SL + GQ D+ F T V + Q KTGAL+ ACE G Sbjct: 160 ----LTGSLLR------LCSGQSADLA--FETRTDVTLAQCVEMAAGKTGALLGCACEIG 207 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A+ A Q+ FG +LG+ FQL DDLL D Sbjct: 208 ALAGGAGQDRAGLFGRFGHHLGLAFQLTDDLLGIWGD 244 >gi|326774821|ref|ZP_08234086.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1] gi|326655154|gb|EGE40000.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1] Length = 349 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 26/169 (15%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKT 136 A+E IH +SLIHDD+ MD RR +PT+ Y A++AG+ L A ++ +P Sbjct: 88 AVELIHTFSLIHDDI--MDGDETRRRRPTLWKAYGTGPAVLAGDALFALAVSTLAEAPGP 145 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLG----GQMLDIQDEFIDET--------QVFMIQKMK 184 +R L G LG GQ D+ E T + + K Sbjct: 146 GGAAAVRQ-----------LAGALGDLVHGQAQDLLFESRPWTGPGAVLPHEYRSMATHK 194 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TG+L+ A GA++A A + E L G ++G+ FQ DDLL D Sbjct: 195 TGSLLGCAAALGAVLAGAPASTVEALDLAGRHVGVAFQAVDDLLGIWGD 243 >gi|118594190|ref|ZP_01551537.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Methylophilales bacterium HTCC2181] gi|118439968|gb|EAV46595.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Methylophilales bacterium HTCC2181] Length = 322 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 9/180 (5%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR+ L SL ++ T ++ E IH SL+HDD+ D RRG+ TV Sbjct: 51 GKWIRAKLALATGSLLGLSSETYIKWAVVCELIHSASLLHDDV--CDKDLYRRGRLTVWK 108 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 ++ AI G+ L+ +F+ I T++ ++L L + ++ ++ GQ +D+ Sbjct: 109 EFGIPAAICTGDYLIAESFKKI----TEISQGWHQTILLKLLSS-SVKDIVFGQSVDVSV 163 Query: 170 E--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + +D I KTG L+ +E L+ ENLG+ +Q +D+ Sbjct: 164 DSVLLDWANYQKIAIKKTGPLIMLPIMGMFKCKEFDGDECIALKEISENLGLAYQWVNDI 223 >gi|302325898|gb|ADL25099.1| polyprenyl synthetase family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 317 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 29/217 (13%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV---TECAS----LFNVNHLTALRV 75 +++Q A + +DRL++ GK+IRS L+ C + + V H A Sbjct: 12 VIMQVAKNAPAGISDRLVTLFSRK---GKRIRSTLLCLLANCGAQKPDIDRVAHACA--- 65 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E +H SL+HDD+ +D +RRG+ T H ++ A++ G+ +L+ + + + Sbjct: 66 --AVELLHLASLVHDDI--IDGTDVRRGQKTAHREWGTQVAVLIGDYVLSQSMRCVIDEQ 121 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFA 192 + NI +++S + ++ G+++++ D + I KT AL+ A Sbjct: 122 AR---NI--PVIISDAAD----KLIIGEIMELDHCGDMSLSRKSYNEIIDGKTAALIDAA 172 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 G I+A Q + G + GI FQ+ DDLLD Sbjct: 173 ARIGGILAGFDQPMVDECAKMGTHFGIAFQIIDDLLD 209 >gi|313606489|gb|EFR83338.1| polyprenyl synthetase [Listeria monocytogenes FSL F2-208] Length = 206 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 86/162 (53%), Gaps = 18/162 (11%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +Y A+ G+ L F+I+S+ + + +NI ++ ++ +L G++ + Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155 Query: 168 QDEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQ 204 + + +T V + + + KT L +C SGA + A++ Sbjct: 156 RTSY--KTNVTVREYLTRISGKTAQLFALSCYSGATGSKATR 195 >gi|256832658|ref|YP_003161385.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603] gi|256686189|gb|ACV09082.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603] Length = 368 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 47/225 (20%) Query: 39 LLSAIRYALLGGKKIRSFLVTEC-----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 L++A R GGK++R+ L+ + ++ VGAA+E +L HDD+ Sbjct: 45 LMTAWRSLTSGGKRVRALLMYHVFRGIESGRSGLSDEDLYGVGAALELFQAAALFHDDV- 103 Query: 94 SMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYA---FEIISSP 134 MD RRG+PTVH Y + AI+ G+ L + F ++P Sbjct: 104 -MDRSDTRRGEPTVHRVFAQRHRTSQWVGDPDLYGQSAAILLGDLSLVASEQLFRSATAP 162 Query: 135 ---KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--------ETQVFMIQKM 183 +++ +D+ + M+ GQ +D + + + + +I Sbjct: 163 GQHRSRARDHFDAMRMIVTV----------GQFMDTHAQVVPLSDDDDAMQRALDVIATK 212 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 T + GA +A A E+LR FG+ LG FQL DD L Sbjct: 213 TTHYSVVAPLLIGAALAGAPTRVDEQLRAFGQPLGTAFQLIDDDL 257 >gi|217039783|gb|ACJ76979.1| geranyl diphosphate synthase [Linum usitatissimum] Length = 209 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 8/156 (5%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG ++++ A++AG+ LL+ A ++S Sbjct: 56 RIAEITEMIHVASLLHDDV--LDDADTRRGIKSLNLVMGNKVAVLAGDFLLSRACVALAS 113 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + + S L + H + + M QM ++ KT +L+ +C Sbjct: 114 LR---NTEVVSLLATVVEHLVTGETM---QMTTTSEQRCSMEYYMQKTYYKTASLISNSC 167 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ A++A + +G NLG+ FQL DD+LD Sbjct: 168 KAVALLAGQTTEVATLAFEYGRNLGLAFQLIDDVLD 203 >gi|291236349|ref|XP_002738102.1| PREDICTED: PDSS1 protein-like [Saccoglossus kowalevskii] Length = 403 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 12/157 (7%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V E IH SLIHDD+ +D RRGK V+ + + AI+ G+ +L+ + +++ Sbjct: 153 VAMIAEMIHTASLIHDDV--IDAADTRRGKAAVNEIWGQKNAILVGDFILSKSSALLARI 210 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFA 192 + + SQ + L +Q LG + +DE +E +QK KT +L+ + Sbjct: 211 GNKEVVIVISQAIDDLVRGEFMQ--LGSK----EDE--NERFAHYLQKTYKKTASLIANS 262 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 C++ +I++ + E +G N+GI FQL DD+LD Sbjct: 263 CKAVSILSGCNPAIVEITYQYGRNMGIAFQLVDDMLD 299 >gi|229915238|gb|ACQ90681.1| geranyl diphosphate synthase small subunit [Humulus lupulus] Length = 279 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 11/157 (7%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+ +A+ +H + H+ LP D+ P +H YD ++ + +L FE++ Sbjct: 76 AIAAASALRLLHAANFTHEHLPLTDSP---SPSPVIHNSYDPSIQLLMPDAILPLGFELL 132 Query: 132 SSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQM------LDIQDEFIDETQVFMIQKM 183 + ++N ++++ G +G+L GQ + DE + +V + Sbjct: 133 AQSYNPAQNNSDRVLRVIVEFARAFGSKGILDGQYRQRVVSISNGDEVDNAERVDCSGRE 192 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 K G + A GAI+ A++ E E+LR FG +G+I Sbjct: 193 KEGKMHACAAACGAILGDANEEETEKLRTFGLYVGMI 229 >gi|15639670|ref|NP_219120.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum str. Nichols] gi|189025908|ref|YP_001933680.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum SS14] gi|2072008|gb|AAB53642.1| octaprenyl-diphosphate synthase [Treponema pallidum] gi|3322980|gb|AAC65646.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum str. Nichols] gi|189018483|gb|ACD71101.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum SS14] Length = 364 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 21/163 (12%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-- 132 + A +E IH SL+HDD+ D+ RRGKP +++Y + A + L +A +I Sbjct: 98 LSAVVELIHTASLLHDDIE--DHSSTRRGKPCAYLRYGTDCVLNAASWLYFHAHALIDTL 155 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFI-DETQVFMIQKMKTGA 187 S + LK + S +S T + + GQ LDI E I Q + +KTGA Sbjct: 156 SIEPALKAALFSA-TISATRALHM-----GQALDIAWHRSPELIPSRAQYLRMVALKTGA 209 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGEN---LGIIFQLADDL 227 L+ + E G + A S E R FG +GI FQ+ DD+ Sbjct: 210 LIALSGELGFLCAGYSAREA---RSFGAQVMPIGIGFQILDDV 249 >gi|313672526|ref|YP_004050637.1| polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312939282|gb|ADR18474.1| Polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 323 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 10/182 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + L + + +E IH +L+HDD+ +D RRG+P+ + Sbjct: 43 GGKRLRPIFMFLSSGLGGYTGNRDVILSGVVEYIHTATLLHDDV--IDGAKFRRGRPSAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ G+ L + AF + +KD + + Q++L+ +G + Q++ Sbjct: 101 QAFGNDITVLCGDFLYSRAFVNL------VKDGDPKVQMILANAAKTMSEGEVF-QLVKT 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + + + I KT L CE GA++A + + FG+ +G+ FQ++DD+ Sbjct: 154 ANFNLSFEEYNKIIFSKTAVLFSACCEIGAMLAGFDGERVKMMAEFGKIVGLSFQMSDDI 213 Query: 228 LD 229 LD Sbjct: 214 LD 215 >gi|317152516|ref|YP_004120564.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316942767|gb|ADU61818.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 322 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 14/184 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L A + + ++E +H +L+HDD +D+ +RRG+ H Sbjct: 41 GGKRIRPMLTLLFARAMGYDRDDYHAIACSLELLHSATLLHDDY--LDDAELRRGRSAAH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 + + I+AG+ LL A E+ + N R +L+ G+ G++ +I Sbjct: 99 LVFGRTETILAGDALLALANEMGAR-----YGNARLCWLLAR----GIMETAVGEIEEIR 149 Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +D I KT L+ AC GA +A A+ +++ +G NLGI FQL D Sbjct: 150 FSKHPTLDREAYMNIIIGKTARLIECACRCGAALAGATPEQEDAAGEYGLNLGIAFQLVD 209 Query: 226 DLLD 229 D LD Sbjct: 210 DALD 213 >gi|256370650|ref|YP_003108475.1| putative polyprenyl synthetase [Candidatus Sulcia muelleri SMDSEM] gi|256009442|gb|ACU52802.1| putative polyprenyl synthetase [Candidatus Sulcia muelleri SMDSEM] Length = 317 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 19/190 (10%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 + L GK +R L+ + ++ + IE IH S+IHDD+ +DN RRG Sbjct: 36 FFLKKGKYVRPLLIFLITKMLGTISKKTYKLASIIELIHTASIIHDDV--IDNSSFRRGF 93 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 T++ ++ A+I G+ + + + + + + +N+ S L+L ++ +G L Q+ Sbjct: 94 LTINSLWNNKIAVIFGDYIFSKSLNLALNHNSNHYNNLFSNLILKMS-----EGEL-YQI 147 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACE-SGAIMAHASQNEKERLRCFGENLGII--- 220 I++ E I KT L+ CE SG ++ +K+ F + +GI+ Sbjct: 148 DFIKNHKFSEKNYKKIIFNKTALLISTCCEQSGKLL------QKKHTLFFLKKIGILIGL 201 Query: 221 -FQLADDLLD 229 FQ+ DDLLD Sbjct: 202 SFQIKDDLLD 211 >gi|182434309|ref|YP_001822028.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462825|dbj|BAG17345.1| putative polyprenyl diphosphate synthase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 349 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 26/169 (15%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKT 136 A+E IH +SLIHDD+ MD RR +PT+ Y A++AG+ L A ++ +P Sbjct: 88 AVELIHTFSLIHDDI--MDGDETRRRRPTLWKAYGTGPAVLAGDALFALAVSTLAEAPGP 145 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLG----GQMLDIQDEFIDET--------QVFMIQKMK 184 +R L G LG GQ D+ E T + + K Sbjct: 146 GGAAAVRQ-----------LAGALGDLVHGQAQDLLFESRPWTGPGAVLPHEYRSMATHK 194 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TG+L+ A GA++A A + E L G ++G+ FQ DDLL D Sbjct: 195 TGSLLGCAAALGAVLAGAPASTVEALDLAGRHVGVAFQAVDDLLGIWGD 243 >gi|296393493|ref|YP_003658377.1| polyprenyl synthetase [Segniliparus rotundus DSM 44985] gi|296180640|gb|ADG97546.1| Polyprenyl synthetase [Segniliparus rotundus DSM 44985] Length = 378 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 30/178 (16%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------EVTAI 117 RV AA+E + L+HDD+ +D +RRG+P++H +++ E AI Sbjct: 98 RVCAALELLQAGLLVHDDI--IDQSDLRRGEPSLHRRFEAEHSREGWSGDAARHGEALAI 155 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRS---QLMLSLTHNIGLQGMLGGQMLDI----QDE 170 +AG +A ++ + + R+ ++ ++ + +GGQ LD+ D+ Sbjct: 156 LAGELAFVWADDLAAEGLDAVAGADRTAFRKVWSAMRAEV-----IGGQCLDVLAQAGDD 210 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +E +I+ + E G ++A A+++ R FG+++G+ FQL DDLL Sbjct: 211 ESEEAATRVIRWKTASYTVARPLELGGVLACANESLLTFYRSFGDDVGVAFQLHDDLL 268 >gi|254470016|ref|ZP_05083420.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062] gi|211960327|gb|EEA95523.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062] Length = 337 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A +F + + A++E +H +L+HDD+ +D +RRGK Sbjct: 56 GGKRLRPMLTLAFAQMFGYEGEGHVILAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ ++ I S+ + LQ LG Q Sbjct: 114 KLWGNQASVLVGDYLLGQAFKMMVDVRSLEALRILSEASAIIAEGEVLQ--LGAA----Q 167 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + KT AL ACE +A + R FG LG FQL DD L Sbjct: 168 DTTTTYDMYLRVIEAKTAALFAAACEVSPEIADKGDEMRAAARKFGLELGYAFQLVDDAL 227 Query: 229 D 229 D Sbjct: 228 D 228 >gi|282865685|ref|ZP_06274735.1| Polyprenyl synthetase [Streptomyces sp. ACTE] gi|282559329|gb|EFB64881.1| Polyprenyl synthetase [Streptomyces sp. ACTE] Length = 363 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 23/205 (11%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104 ++ GGK++R L+ E A L + L A +IE +H + L+HDDL +D+ RRG Sbjct: 57 SMRGGKRMRVVLLHEAAGLVSAEPAEGLDAAALSIELLHTHGLVHDDL--IDDSPTRRGG 114 Query: 105 PTVHIQYDEV----------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 P+ + Y E ++AG+ L + ++ + +L +R + + T Sbjct: 115 PSTYYAYRERFPRLPQAALGLTVLAGDLALGLSLRVLL--EARLPVALRQAMAEAQTRAA 172 Query: 155 GLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--E 208 GQ++D++ +F E + + K+ A ++A Q E + Sbjct: 173 A--DTFVGQIVDLERDFTGAVPGEDVLHSVADFKSARYSVLAPMRLGLLAAGGQPEAFDQ 230 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 LR + +GI Q+ DD LD D Sbjct: 231 ELRRYARLVGICGQMRDDYLDLYGD 255 >gi|262195439|ref|YP_003266648.1| polyprenyl synthetase [Haliangium ochraceum DSM 14365] gi|262078786|gb|ACY14755.1| Polyprenyl synthetase [Haliangium ochraceum DSM 14365] Length = 348 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 22/229 (9%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLL--SAIRYALLGGKKIRSFLVTECASLFNVN 68 E S R+ +LD+ + S + +R L A + GK+ R+ LV C L + Sbjct: 18 EASARLLALLDESFAEIDSGLPPHLWERALLGPAREFLRRPGKQFRARLVEVCWRLAGGD 77 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + +E +H SLI DD+ D RRG P +H Y A+ GN + + Sbjct: 78 SAMPIELPLVVELLHAGSLIVDDIE--DGSSTRRGGPALHHLYGTSIALNTGNWMYFWPL 135 Query: 129 EIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ------VF 178 +I S + + + R++ L L H GQ LD+ + + Q V Sbjct: 136 TLIDRLDQSSERSAEMHRRTRQTLVLCHQ--------GQALDLALKVTELEQSEVPHVVR 187 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + KT ALM A GAI A A + + FG LG+ Q+ DDL Sbjct: 188 ATTRSKTSALMSLAAALGAIAAGAESRVLDAVTRFGTELGVGLQMLDDL 236 >gi|170781757|ref|YP_001710089.1| putative polyprenyl synthetase [Clavibacter michiganensis subsp. sepedonicus] gi|169156325|emb|CAQ01473.1| putative polyprenyl synthetase [Clavibacter michiganensis subsp. sepedonicus] Length = 373 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 105/260 (40%), Gaps = 55/260 (21%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYA---LLGGKKIRS-FLVTECASLFNVNHLT 71 + T LDD L A+ ++ D L+ ++ L GGK+ R+ F S+ ++ Sbjct: 11 VQTRLDDFLTAQAAGLREISPD-LVPIQEFSSDLLRGGKRFRAQFCYWGWRSVIDLEPSP 69 Query: 72 ALR--------------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----- 112 A R V A +E H +LIHDD+ +D RRG+P H +++ Sbjct: 70 AGRPQGEERPGYRAVVGVAAGLEIFHAAALIHDDI--IDRSDTRRGRPAAHRRFEALHAA 127 Query: 113 -----------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 E A + G+ LL ++ E++ L D ++ + + Q LG Sbjct: 128 SGWGGSSAGFGEAGATLLGDLLLGWSDELLIDSLLALADGSAARATRAELATMRTQVTLG 187 Query: 162 GQMLDIQDEFIDETQ-------------VFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 Q LD+ +E T V+ K A + GA +A A+ + Sbjct: 188 -QYLDVLEEVAWPTVPEDDTLARAHNVIVYKSAKYSIEAPLVV----GASLAGATPEQVA 242 Query: 209 RLRCFGENLGIIFQLADDLL 228 LR G LGI FQL DD+L Sbjct: 243 ALRAVGLPLGIAFQLRDDVL 262 >gi|290975757|ref|XP_002670608.1| predicted protein [Naegleria gruberi] gi|284084169|gb|EFC37864.1| predicted protein [Naegleria gruberi] Length = 437 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 14/167 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ E IH SLIHDD+ +D+ RRG P ++ A++AG+ LL A ++ Sbjct: 185 KLAETTELIHVASLIHDDI--VDDADTRRGIPALNKNVGNKVAVLAGDFLLGRASINLAR 242 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 ++ S ++ L + LQ M G LD ++ +T F KT +L+ +C Sbjct: 243 IGNIESIDLISTVIEHLAYGEVLQ-MAGKGKLDF--DYYMKTIFF-----KTSSLIANSC 294 Query: 194 ESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 ++ A+++ ++ E + FG+++GI +QL DD LD + DL K Sbjct: 295 KASAVLSGSTNRELIDAAYTFGKHVGIAYQLTDDSLDFTQSQNDLGK 341 >gi|294816499|ref|ZP_06775142.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|294329098|gb|EFG10741.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 397 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 56/257 (21%) Query: 9 LQENSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---S 63 L N + ++T L+ L+ Q A+ + + + + GGK++R L C Sbjct: 49 LLANRRAVETCLEGFLVGKQRAAAEHCMPAEVVQTLRNFVFAGGKRLRPLLCI-CGWYAG 107 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH---------IQYDEV 114 + ++ A++E H ++LIHDDL MD+ RRGKPTVH ++ E Sbjct: 108 GGAGDMAAVVQAAASLEMFHAFALIHDDL--MDHSDTRRGKPTVHRSLAAHHSALRGQEA 165 Query: 115 T-------AIIAGNGLLTYAFEIISSPK---------TQLKDNIRSQLMLSLTHNIGLQG 158 AI+ G+ L ++ E++ + + D +R+++M Sbjct: 166 ASHLGTGGAILVGDLALAWSDELLHTAGLTPDRLAAVLPVIDGMRTEVMY---------- 215 Query: 159 MLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLR 211 GQ LD+ D +D + + KT + CE GA +A A E Sbjct: 216 ---GQYLDLCAAGDPTLDLDAALTVARYKTAK---YTCERPLHIGASLAGAGLAVLEACT 269 Query: 212 CFGENLGIIFQLADDLL 228 + LG FQL DDLL Sbjct: 270 AYALPLGEAFQLRDDLL 286 >gi|240171992|ref|ZP_04750651.1| polyprenyl synthase [Mycobacterium kansasii ATCC 12478] Length = 385 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 17/194 (8%) Query: 50 GKKIRSFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GK+IR+ L C S V+ A+ + AIE H SLIHDD+ D +RRG Sbjct: 101 GKRIRAGLGLACFRLQPSAATVSPAEAIDLACAIEMFHESSLIHDDI--CDGSLLRRGAR 158 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN----IRSQLMLSLTHNIGLQGMLG 161 +V + A AG L A +I++ + DN R ++T+ L + Sbjct: 159 SVPAAFGVRIAARAGFHLAGTALQILAR---VVADNPAVFARVGEDPAITYLDQLSELSF 215 Query: 162 GQMLDIQDEFIDETQVFM----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ+++ ID++ + + KTG L AC G + L + + L Sbjct: 216 GQLIETLPPAIDDSVLRRHYERVAGAKTGTLFRLACSYGGTAGGVDADGLRALMRYADQL 275 Query: 218 GIIFQLADDLLDCE 231 + FQ+ DD+ D E Sbjct: 276 ALAFQIMDDVCDVE 289 >gi|293376156|ref|ZP_06622402.1| polyprenyl synthetase [Turicibacter sanguinis PC909] gi|325845300|ref|ZP_08168603.1| putative heptaprenyl pyrophosphate synthase component 2 [Turicibacter sp. HGF1] gi|292645229|gb|EFF63293.1| polyprenyl synthetase [Turicibacter sanguinis PC909] gi|325488661|gb|EGC91067.1| putative heptaprenyl pyrophosphate synthase component 2 [Turicibacter sp. HGF1] Length = 321 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 18/193 (9%) Query: 49 GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGKKIR L ++ HL L A +E +H +L+HDD+ +D+ RRG+ T Sbjct: 44 GGKKIRPGLCIIGGEFGDKDIKHLYHL--SAVLEMLHMATLVHDDI--IDDSVQRRGQLT 99 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +Y + A+ G+ + T FEI++ ++ M L+ + M G++ Sbjct: 100 TQQKYGKDYAVYTGDYIFTKCFEILA-------EHYELHHMKELSKTVSRVCM--GEIDQ 150 Query: 167 IQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 F T V K+ KT AL+ + GA + + ++L G ++G FQ+ Sbjct: 151 FDGRFKSHTSVKKYLKVIGAKTSALLAVSLSVGAYESGCDEKFCKKLGKIGLHIGNAFQI 210 Query: 224 ADDLLDCEEDLPK 236 DD+LD D + Sbjct: 211 IDDILDYVGDASR 223 >gi|148270387|ref|YP_001244847.1| polyprenyl synthetase [Thermotoga petrophila RKU-1] gi|147735931|gb|ABQ47271.1| Polyprenyl synthetase [Thermotoga petrophila RKU-1] Length = 298 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 67 AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFYTVEEIGN 124 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 D +R + N+ ++ M ++++ + I + + +I + K+GAL A + Sbjct: 125 ---DRLRRTFL-----NV-IRRMSEAELIEQLSRYKPITKEEYLLIVEGKSGALFGLALQ 175 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A+ E L G +G I+Q+ DD++D Sbjct: 176 LPALFEGEL---GEDLYNLGVTIGTIYQMFDDIMD 207 >gi|218887577|ref|YP_002436898.1| polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758531|gb|ACL09430.1| Polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 331 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 28/162 (17%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKT 136 ++E +H +L+HDD+ +D +RRG P H + + ++AG+ LL A I++ Sbjct: 79 SVELLHSATLLHDDI--LDGADLRRGLPAAHTMFGQTETVLAGDALLALANRIVARYGDA 136 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---------QDEFIDETQVFMIQKMKTGA 187 +L + I ++ + T G++++I D +ID I KT Sbjct: 137 RLTETIAEAIVQTAT----------GEIVEIAHQRSTDHGHDTYID------IITGKTAW 180 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ +CE GA+ A A + FG NLGI FQ+ DD LD Sbjct: 181 MLRASCELGALAAQAPDEAVQAAAGFGLNLGIAFQIVDDALD 222 >gi|307105639|gb|EFN53887.1| hypothetical protein CHLNCDRAFT_58364 [Chlorella variabilis] Length = 634 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 83/159 (52%), Gaps = 14/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D RRGK +++ + AI+AG+ LL A +++ Sbjct: 194 RIAEITELIHVASLLHDDV--IDAAGTRRGKKSLNALFGNKVAILAGDFLLARASVSLAA 251 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQKM-KTGALMC 190 + N + L++S + L+ ++ G++L + + + + +M + KT +LM Sbjct: 252 LR-----NPEAILLMSQS----LEHLVAGEILQLTADVEEAASMDHYMRKTYCKTASLMA 302 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +C + A++ + +G ++G+ FQL DD++D Sbjct: 303 NSCRAVAVLGGHGAGDCGAAAEYGRHVGLAFQLVDDVMD 341 >gi|21219102|ref|NP_624881.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)] gi|14716951|emb|CAC44181.1| putative polyprenyl synthetase [Streptomyces coelicolor A3(2)] Length = 357 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 23/201 (11%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104 +L GGK++R L+ E A L + L A +IE + + L+HDDL +D+ RRG Sbjct: 51 SLRGGKRMRVVLLHEAARLVTAEPVDGLDAAALSIELLQTHGLVHDDL--IDDSATRRGG 108 Query: 105 PTVHIQYDEV----------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 PT + Y E ++AG+ L + ++ + +L +R Q M+ + Sbjct: 109 PTTYYAYRERFPGRPRAALGLTVLAGDLALALSLRVLL--EAELPVAVR-QAMVEVQTRA 165 Query: 155 GLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQN--EKE 208 + GQ+ D++ +F D + + KT A ++A ++ ++ Sbjct: 166 ATDTFV-GQIADLERDFTAAVPDAEMLHDVADHKTARYSVLAPMRLGLLAAGAEPGAHED 224 Query: 209 RLRCFGENLGIIFQLADDLLD 229 LR + +GI Q+ DD LD Sbjct: 225 ELRRYARLVGICGQMRDDWLD 245 >gi|120402584|ref|YP_952413.1| polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1] gi|119955402|gb|ABM12407.1| Polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1] Length = 1155 Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 50/214 (23%) Query: 47 LLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 L GGK +RS +L C + ALR A++E +H ++LI DD+ MD+ +RR Sbjct: 849 LDGGKYVRSTYMYLGWLCGEREDT---AALRASASLELLHTFALIQDDV--MDSSPMRRA 903 Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLK-------- 139 +P+ H+ ++ E AI+ G+ L +A E++ Sbjct: 904 RPSAHVALGRWHRDRALSGSASRFGESAAILLGDLCLVWAEEMLRRSGVDADALARVWPR 963 Query: 140 -DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF-ACE 194 D +R++L + GQ+ D+ + F +V + + K+G E Sbjct: 964 YDAMRTELAI-------------GQLSDLLNSCQTFPTLPEVLDVLRRKSGNYTVRRPLE 1010 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA MA S + + L +G +G FQL DD+L Sbjct: 1011 LGAAMAGCSADVADALSGYGAAIGEAFQLRDDIL 1044 >gi|254392179|ref|ZP_05007366.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|326444821|ref|ZP_08219555.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|197705853|gb|EDY51665.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 362 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 56/257 (21%) Query: 9 LQENSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---S 63 L N + ++T L+ L+ Q A+ + + + + GGK++R L C Sbjct: 14 LLANRRAVETCLEGFLVGKQRAAAEHCMPAEVVQTLRNFVFAGGKRLRPLLCI-CGWYAG 72 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH---------IQYDEV 114 + ++ A++E H ++LIHDDL MD+ RRGKPTVH ++ E Sbjct: 73 GGAGDMAAVVQAAASLEMFHAFALIHDDL--MDHSDTRRGKPTVHRSLAAHHSALRGQEA 130 Query: 115 T-------AIIAGNGLLTYAFEIISSPK---------TQLKDNIRSQLMLSLTHNIGLQG 158 AI+ G+ L ++ E++ + + D +R+++M Sbjct: 131 ASHLGTGGAILVGDLALAWSDELLHTAGLTPDRLAAVLPVIDGMRTEVMY---------- 180 Query: 159 MLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLR 211 GQ LD+ D +D + + KT + CE GA +A A E Sbjct: 181 ---GQYLDLCAAGDPTLDLDAALTVARYKTAK---YTCERPLHIGASLAGAGLAVLEACT 234 Query: 212 CFGENLGIIFQLADDLL 228 + LG FQL DDLL Sbjct: 235 AYALPLGEAFQLRDDLL 251 >gi|296166038|ref|ZP_06848487.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898603|gb|EFG78160.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 349 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 26/166 (15%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTY 126 H +L+HDD+ +D+ RRG+PT H+++ ++ AI+ G+ L++ Sbjct: 77 HACALVHDDV--IDDSATRRGRPTTHVRFADLHRARRWRGSPERFGMSAAILLGDLALSW 134 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 A +I+ + R Q + + +LGGQ LDI E + + T Sbjct: 135 ADDIVFRAELSPGAARRVQRVWAEIRT----EVLGGQYLDIVAEASGAESIASAMNVDTY 190 Query: 187 ALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 C+ GA A + ++ FG ++G+ FQL DD+L Sbjct: 191 KTACYTVSRPLQLGAAAAADRPDVQDVFGRFGTDIGVAFQLRDDVL 236 >gi|156937132|ref|YP_001434928.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I] gi|156566116|gb|ABU81521.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I] Length = 271 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 26/222 (11%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75 ID L++L+ T + +R+++ +Y + GGK++R LV N AL Sbjct: 15 IDKELEELIKNT-------YEERVINVAKYIVNGGKRLRGALVMLVNEALGGNPEDALPA 67 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134 A+E +H SL DD+ +D ++RRG+P+ + ++ N L+ +A ++ Sbjct: 68 ALALELVHASSLSIDDIIDLD--FVRRGRPSAWVAKGVANTVMVSNLLIPHAIMLVKRYG 125 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 K + + +S + G G+ ++ + I+ KT ++ + Sbjct: 126 KRAIDKVVEVWWEVSKGEVWDVHGPPEGKGVEAYEAIIE---------AKTASMFALSAY 176 Query: 195 SGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEED 233 G + A E+ERL +G LG +Q+ADDL D E D Sbjct: 177 LGGLAA----GEEERLEGLWRYGFLLGKAYQIADDLKDVEGD 214 >gi|297159283|gb|ADI08995.1| putative polyprenyl diphosphate synthase [Streptomyces bingchenggensis BCW-1] Length = 380 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 23/191 (12%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 G K++R LV A + + + +E H +L HDD+ +D+ RR P Sbjct: 53 GAKRLRPLLVLLAARFGDPDAPGVVPSAVVVELTHLATLYHDDV--LDDADARRRTPATD 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQM 164 +D A++ G+ L A +++ P+ D R Q+ GQ+ Sbjct: 111 ANWDNSVAVLTGDFLFARASHLLADLGPEAVRIQADAFRQQVT--------------GQI 156 Query: 165 LDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 L+ D + + + G+L+ + GA+ + A + L +GE LG+ Sbjct: 157 LETAGPSGDRDPIEHYLEVLAGRAGSLIAVSGRLGALASGAGREVAGVLARYGERLGVAC 216 Query: 222 QLADDLLDCEE 232 +LA+D+LD E Sbjct: 217 RLAEDVLDIAE 227 >gi|168020145|ref|XP_001762604.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686337|gb|EDQ72727.1| predicted protein [Physcomitrella patens subsp. patens] Length = 340 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 18/160 (11%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV-HIQYDEVTAIIAGNGLLTYAFEIIS 132 R+ IE IH SL+HDD+ +D+ RRG ++ H ++V A I LL A +S Sbjct: 85 RIAEIIEMIHVASLLHDDV--LDHADTRRGISSLNHAMGNKVCAAI---FLLARASVTLS 139 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALM 189 S + + SQ+ L+ ++ G+++ + E+ + + +I KT +LM Sbjct: 140 SLRNTQVVELLSQV---------LEHLVTGEIMQLSSEYKNMSNFDVISWKTFYKTASLM 190 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +C+S A++A + R +G +LG+ +QL DD L+ Sbjct: 191 ANSCKSIAVLAGQPEEVANRAFDYGRHLGLAYQLVDDALN 230 >gi|281412693|ref|YP_003346772.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10] gi|281373796|gb|ADA67358.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10] Length = 299 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFYTVEEIGN 125 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 D +R + N+ ++ M ++++ + I + + +I + K+GAL A + Sbjct: 126 ---DRLRRTFL-----NV-IRRMSEAELIEQLSRYKPITKEEYLLIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A+ E L G +G I+Q+ DD++D Sbjct: 177 LPALFEGEL---GEDLYNLGVTIGTIYQMFDDIMD 208 >gi|311113328|ref|YP_003984550.1| geranylgeranyl pyrophosphate synthase [Rothia dentocariosa ATCC 17931] gi|310944822|gb|ADP41116.1| geranylgeranyl pyrophosphate synthase [Rothia dentocariosa ATCC 17931] Length = 380 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 62/275 (22%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLGGKKIR---S 55 ++ G+ S+ + + ++ + + Q + + +D L L AI GGK++R S Sbjct: 10 LSDGVKSEQEAYLRAVEATMSEFFAQQRTLLTAISHDALPLLEAIESLSSGGKRLRALLS 69 Query: 56 FLVTECASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111 + A ++ +A +R GAA+E +LIHDD+ +D RRGKP+VH ++ Sbjct: 70 YWGWRGAGGDSILEGSAPAPIIRAGAALELFQSAALIHDDI--IDRSDTRRGKPSVHKKF 127 Query: 112 DE----------------VTAIIAGNGLLTYAFEIISS------PKTQLK---DNIRSQL 146 + IIAG+ L+++ ++ SS T+ + D +R+++ Sbjct: 128 ETQHIQNSWVGDTFNYGLTGGIIAGDLCLSWSEQMFSSIGEGALSGTEARNIFDTMRTEV 187 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACE-----SGA 197 M GQ LD+ E I E + ++ ++CE GA Sbjct: 188 M-------------AGQYLDVLSEVIPAETPENALARAHRVIQYKSAKYSCEHPLVLGGA 234 Query: 198 I----MAHASQNEKERLRCFGENLGIIFQLADDLL 228 + +AH + R FG LG FQL DD L Sbjct: 235 LALTAIAHQDHPILGKYRAFGLPLGEGFQLRDDEL 269 >gi|290891441|ref|ZP_06554500.1| hypothetical protein AWRIB429_1890 [Oenococcus oeni AWRIB429] gi|290478883|gb|EFD87548.1| hypothetical protein AWRIB429_1890 [Oenococcus oeni AWRIB429] Length = 335 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 43/223 (19%) Query: 26 QTASHMQTQHNDRLLSAI------RYALLGGKKIRS----FLVTECASLFNVNHLTALRV 75 Q + + Q+N +++ A+ RY L +K F + +CA Sbjct: 33 QEKTEVLIQNNGKMIRALITILFGRYTLTVNQKNYDQETIFSIDQCA------------- 79 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AAIE +H +L+HDD+ +DN RRG T+ + I G+ L T F +++S Sbjct: 80 -AAIELLHLATLVHDDV--IDNAEKRRGLTTLQNFFGNKNTIYLGDILFTKYFYLLTS-- 134 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192 + H+ ++ +L G+++ +F +T + + K KT L + Sbjct: 135 ------LAPSKEFIAYHSSAMEKVLTGELIQDALKFHKQTTLAEYYQAIKGKTATLFSLS 188 Query: 193 CESGAIMAHASQN------EKERLRCFGENLGIIFQLADDLLD 229 SG + ++ E + FG NLG+ FQ+ DDL D Sbjct: 189 AVSGVWLGKKNKQFDEDNLEFKNAFNFGYNLGMAFQMLDDLKD 231 >gi|227487152|ref|ZP_03917468.1| possible trans-hexaprenyltranstransferase [Corynebacterium glucuronolyticum ATCC 51867] gi|227541680|ref|ZP_03971729.1| possible trans-hexaprenyltranstransferase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092810|gb|EEI28122.1| possible trans-hexaprenyltranstransferase [Corynebacterium glucuronolyticum ATCC 51867] gi|227182648|gb|EEI63620.1| possible trans-hexaprenyltranstransferase [Corynebacterium glucuronolyticum ATCC 51866] Length = 340 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 18/213 (8%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FNVNHLTALRVGAA 78 +++LL + +H + N+++ I A GGK+ R + L + ++ Sbjct: 35 VEELLQKELNHGEDFVNEKV---IHLAAAGGKRFRPMFAVLASQLGTRASCEDVIKAATV 91 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E H +L HDD+ MD RRG + + ++ AI+AG+ LL +A ++L Sbjct: 92 VEMTHLATLYHDDV--MDEADRRRGVESANARWGNSVAILAGDILLAHA--------SRL 141 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQVFM-IQKMKTGALMCFACESG 196 + + + G ++ GQM + + D+ + ++ + KTG L+ A G Sbjct: 142 MATLGTDTVAHFAQTFG--DLVTGQMRETVGPGDGDKIEHYLNVVHEKTGVLISSAGYLG 199 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A+ S L+ FG +G IFQ+ DD++D Sbjct: 200 ALHGGCSPEITRALQQFGVYIGTIFQIVDDIID 232 >gi|54298645|ref|YP_125014.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris] gi|53752430|emb|CAH13862.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris] Length = 322 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V ++ + + A +E H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166 + +++ G+ L T + ++ + +K+ +L+L N Q G Q+ + Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMV--EVGIKE------ILNLLANTSHQITCGEVKQLAN 152 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + F + + KT L A G I+ +A ++ L +G +LG FQL DD Sbjct: 153 RHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIEIRDSLYNYGLHLGNAFQLIDD 212 Query: 227 LLD 229 LD Sbjct: 213 ALD 215 >gi|255513726|gb|EET89991.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 383 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 16/189 (8%) Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113 R L+ A +++ L + AA++ + LIHDD+ D +RRG PT+H Y Sbjct: 88 RPMLLMLTALMYDNQDPATLLLAAAVQLSQEWILIHDDIE--DKSEMRRGMPTLHKLYGS 145 Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL---MLSLTHNIG------LQGMLGGQM 164 A+ G+ L + + + IR +L + + ++ L M G Sbjct: 146 SAALHIGDVLHSVMWNMFIDYLGVANPEIRERLYNKFIEVAYSTASGQFQELNFMYGKDG 205 Query: 165 LDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 L E+ F I KT + M + GAI A +N E+L GEN GI FQ+ Sbjct: 206 L----RSAKESTYFEIASGKTSSYSMRGPLQLGAISAGQDENIVEKLGAIGENAGIAFQI 261 Query: 224 ADDLLDCEE 232 DD++D ++ Sbjct: 262 NDDIIDMQK 270 >gi|237785329|ref|YP_002906034.1| putative polyprenyl diphosphate synthase [Corynebacterium kroppenstedtii DSM 44385] gi|237758241|gb|ACR17491.1| putative polyprenyl diphosphate synthase [Corynebacterium kroppenstedtii DSM 44385] Length = 361 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 45/260 (17%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIR-YALLGGKKIR------- 54 +P + + + + L++ ++ S M+ + D ++A+ + + GGK+IR Sbjct: 1 MPRSVDDVPRCVVAHLNEFFMERQSAMKAISPVADEAMAALTDFTINGGKRIRPTFAWLG 60 Query: 55 ---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ- 110 S +T + + + + +++E + +LIHDD+ +D+ RRG PTVH Sbjct: 61 WMGSLQLTFSDAAEHPDADAVMHAASSLELLQSCALIHDDI--IDSSATRRGMPTVHEHF 118 Query: 111 ---------------YDEVTAIIAGNGLLTYA---FEIISSPKTQLKDNIRSQLMLSLTH 152 Y AI+ G+ L++A F + P Q +D T Sbjct: 119 KQSHSAQAWHGRGESYGNAVAILIGDLALSWADDMFMEAALPPAQ-RDRAWQPWQDMRTE 177 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKE 208 ++ GQ++D+ E + + +++ + E GA +A A Q+ Sbjct: 178 ------VVCGQIMDVTAEAQGDGSLRTAERVNRYKTAAYTVERPLHIGAALAGAPQDTVT 231 Query: 209 RLRCFGENLGIIFQLADDLL 228 LR FG ++G+ FQL DD L Sbjct: 232 ALRTFGRDIGVAFQLRDDQL 251 >gi|296108301|ref|YP_003620002.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila 2300/99 Alcoy] gi|295650203|gb|ADG26050.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila 2300/99 Alcoy] Length = 322 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V ++ + + A +E H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166 + +++ G+ L T + ++ + +K+ +L+L N Q G Q+ + Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMV--EVGIKE------ILNLLANTSHQITCGEVKQLAN 152 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + F + + KT L A G I+ +A ++ L +G +LG FQL DD Sbjct: 153 RHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIEIRDSLYNYGLHLGNAFQLIDD 212 Query: 227 LLD 229 LD Sbjct: 213 ALD 215 >gi|255530459|ref|YP_003090831.1| trans-hexaprenyltranstransferase [Pedobacter heparinus DSM 2366] gi|255343443|gb|ACU02769.1| Trans-hexaprenyltranstransferase [Pedobacter heparinus DSM 2366] Length = 323 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 14/177 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R V A L + R A +E +H +L+HDD+ +DN Y RRG +++ Sbjct: 45 GKQVRPMFVFFAAKLCGGIIESTHRGAALVELLHTATLVHDDV--VDNAYERRGFFSINA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ LL ++S ++ + +L + ++ M G++L I+ Sbjct: 103 LWKNKIAVLVGDYLLAKGL-LLSVHNSEFR-------LLQIVSE-AVKQMSEGELLQIEK 153 Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I E F + + KT +L+ C GA A A + E++R FGE +GI FQ+ Sbjct: 154 VRRMDISEELYFDVIRQKTASLIASCCACGAASAGADEATIEKMRLFGEKVGIAFQI 210 >gi|296395152|ref|YP_003660036.1| trans-hexaprenyltranstransferase [Segniliparus rotundus DSM 44985] gi|296182299|gb|ADG99205.1| Trans-hexaprenyltranstransferase [Segniliparus rotundus DSM 44985] Length = 352 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 18/154 (11%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH +L HDD+ MD +RRG P ++++ AI+AG+ L A +I+ Sbjct: 99 IHLATLYHDDV--MDEATMRRGVPAANVRWGNQVAILAGDYLFARACGLIA--------Q 148 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACES 195 + S+ + H ++ GQ D+ D+ I+ KT +L+ Sbjct: 149 LGSEATAIVAHT--FAELVTGQFRDVVGAGADQGNAAKIEHYLATIHGKTASLIGACGRL 206 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A Q+ ++RL G G+ FQ+ADD++D Sbjct: 207 AGLAVRADQDVQDRLASIGVLTGMAFQIADDIID 240 >gi|76788536|ref|YP_330346.1| polyprenyl synthetase family protein [Streptococcus agalactiae A909] gi|76563593|gb|ABA46177.1| polyprenyl synthetase family protein [Streptococcus agalactiae A909] Length = 326 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 22/194 (11%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +L ++ + N + ++ A++E +H +LIHDD+ +D+ +RRG Sbjct: 44 GGKQLRPAFFYLFSQLGNKENQDTQQLKKIAASLEILHVATLIHDDV--IDDSPLRRGNM 101 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T+ ++ + A+ + L T F++I L+ + M + ++ +L G++ Sbjct: 102 TIQSKFGKDIAVYTRDLLFTVFFDLI------LESMADTPFMT--INAKSMRKILMGELD 153 Query: 166 DIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGI 219 + + + + + KT L A + GA A EKE +R G N+G+ Sbjct: 154 QMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGGA---EKEVVRLAGHIGFNIGM 210 Query: 220 IFQLADDLLDCEED 233 FQ+ DD+LD D Sbjct: 211 TFQILDDILDYTAD 224 >gi|325830170|ref|ZP_08163627.1| polyprenyl synthetase [Eggerthella sp. HGA1] gi|325487637|gb|EGC90075.1| polyprenyl synthetase [Eggerthella sp. HGA1] Length = 349 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 11/193 (5%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 I Y+ GGK+ R + + A AAIE H +LIHDD+ D +RR Sbjct: 54 ISYSQNGGKRHRPLICFAACRAVGGDMARATSAAAAIEHFHTAALIHDDIA--DEAELRR 111 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G+P +H+ AI AG+ L+ + S K+ L D + +++ L + + G Sbjct: 112 GEPCMHLTEGMGLAINAGDLALSLVNGTVVSDKS-LDDATKVRVITELIDMT--RRTIEG 168 Query: 163 QMLDI---QDEFIDET-QVFMIQKMKTGALMCFACE--SGAIMAHASQNEKERLRCFGEN 216 Q LDI +D D T + +++ A A GAI+ ++ E E LR +G + Sbjct: 169 QALDIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAIIGGGTEIEIEALRNYGLD 228 Query: 217 LGIIFQLADDLLD 229 G+ FQ+ DDLL+ Sbjct: 229 TGLAFQIQDDLLN 241 >gi|318059311|ref|ZP_07978034.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces sp. SA3_actG] Length = 370 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 34/211 (16%) Query: 49 GGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GG+++RS V C + AL VGAA+E + +L+ DD+ MDN +RRG Sbjct: 59 GGRRLRSAFVWWGLRVACPAPPPGTVAAALTVGAAVELLQSCALVQDDV--MDNSPVRRG 116 Query: 104 KPTVHI---------------QYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146 +P +H+ + + A++AG+ + +A + + P ++ +R Sbjct: 117 QPALHVLLGSTRPAAAGPGALGFGQSAAVLAGDLAMVWAEDTFADAHPPPEVAAPVRRLW 176 Query: 147 MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 + T M+ GQ LD+ D T +K+G + A+ Sbjct: 177 SVLRTE------MIAGQYLDLAGQADASHSATHALRTAVLKSGRYSVARPLELGALLAAA 230 Query: 204 QNEKER-LRCFGENLGIIFQLADDLLDCEED 233 E R LR G G+ FQL DDLL D Sbjct: 231 PPEVCRVLRAAGGAAGLAFQLRDDLLAVWGD 261 >gi|114769799|ref|ZP_01447409.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [alpha proteobacterium HTCC2255] gi|114549504|gb|EAU52386.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [alpha proteobacterium HTCC2255] Length = 335 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 2/83 (2%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R+ + + ASL ++ T+L AA+E +H SLIHDD+ D RRG+ ++ + Sbjct: 56 GKMLRAKMAIQSASLAEIDISTSLLWAAAVEVLHNASLIHDDI--CDGDKQRRGRESIWV 113 Query: 110 QYDEVTAIIAGNGLLTYAFEIIS 132 ++ TA+ G+ L+ +FE+ S Sbjct: 114 KFGRDTALTLGDWLIALSFELAS 136 >gi|118587470|ref|ZP_01544895.1| heptaprenyl diphosphate synthase, component II [Oenococcus oeni ATCC BAA-1163] gi|118432120|gb|EAV38861.1| heptaprenyl diphosphate synthase, component II [Oenococcus oeni ATCC BAA-1163] Length = 335 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 19/163 (11%) Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AAIE +H +L+HDD+ +DN RRG T+ + I G+ L T F +++S Sbjct: 79 AAAIELLHLATLVHDDV--IDNAEKRRGLTTLQNFFGNKNTIYLGDILFTKYFYLLTS-- 134 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192 + H+ ++ +L G+++ +F +T + + K KT L + Sbjct: 135 ------LAPSKEFIAYHSSAMEKVLTGELIQDALKFHKQTTLAEYYQAIKGKTATLFSLS 188 Query: 193 CESGAIMAHASQN------EKERLRCFGENLGIIFQLADDLLD 229 SG + ++ E + FG NLG+ FQ+ DDL D Sbjct: 189 AVSGVWLGKKNKQFDEDNLEFKNAFNFGYNLGMAFQMLDDLKD 231 >gi|46199593|ref|YP_005260.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB27] gi|46197219|gb|AAS81633.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB27] Length = 312 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 18/225 (8%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 + L+ +R + L +L+ ++ H D L++A GGK+IR LV + Sbjct: 2 TDLEAPLRRFEEALSELVQSDVLFIRLIHQD-LVTA------GGKRIRPRLVFLASRALG 54 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A+E +H +L+HDDL +D+ RRGK +Y ++++G+ LL+ Sbjct: 55 GAPFELE-LALAVELLHSATLLHDDL--IDDAETRRGKEAAFRKYGNAVSVLSGDFLLSR 111 Query: 127 AFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 +I+ + + +L + +++ +L+ LQ Q+ ++D ++ + I KT Sbjct: 112 LLHVIAKTGRMELVERF-AEVAKTLSEGEVLQF----QVAALEDYSLENYE--RIITAKT 164 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 LM A E A++ A +E L +G G FQ+ DD LD Sbjct: 165 AVLMALATEGPALLLGAESRVREALYRYGLLYGQAFQMRDDYLDL 209 >gi|256789881|ref|ZP_05528312.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|289773764|ref|ZP_06533142.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|289703963|gb|EFD71392.1| polyprenyl synthetase [Streptomyces lividans TK24] Length = 357 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 23/201 (11%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104 +L GGK++R L+ E A L + L A +IE + + L+HDDL +D+ RRG Sbjct: 51 SLRGGKRMRVVLLHEAARLVTAEPVDGLDAAALSIELLQTHGLVHDDL--IDDSATRRGG 108 Query: 105 PTVHIQYDEV----------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 PT + Y E ++AG+ L + ++ +L +R Q M+ + Sbjct: 109 PTTYYAYRERFPGRPRAALGLTVLAGDLALALSLRVLLD--AELPVAVR-QAMVEVQTRA 165 Query: 155 GLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQN--EKE 208 + GQ+ D++ +F D + + KT A ++A ++ ++ Sbjct: 166 ATDTFV-GQIADLERDFTAAVPDAEMLHDVADHKTARYSVLAPMRLGLLAAGAEPGAHED 224 Query: 209 RLRCFGENLGIIFQLADDLLD 229 LR + +GI Q+ DD LD Sbjct: 225 ELRRYARLVGICGQMRDDWLD 245 >gi|300780819|ref|ZP_07090673.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030] gi|300532526|gb|EFK53587.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030] Length = 368 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 91/218 (41%), Gaps = 48/218 (22%) Query: 45 YALLGGKKIRS------FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 + L GGK+IR F+ + L +++E I +LIHDD+ +D Sbjct: 52 FVLGGGKRIRPTFGWVGFVGANGLENTEEDPAAVLCAVSSLEFIQACALIHDDI--IDAS 109 Query: 99 YIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 RRG PTVH+ ++ E AI+ G+ L +A D++ Sbjct: 110 ATRRGNPTVHVAAAHSHREHNWLGDSDKFGESLAILVGDLALVWA------------DDM 157 Query: 143 RSQLMLS----LTHNIGLQGM----LGGQMLDIQDEFI---DETQVFMIQKMKTGALMC- 190 LS L + +GM +GGQ+LDI E E + + KT A Sbjct: 158 WHHSGLSHAALLRASEPWRGMRTEVIGGQILDISLEAAGCESEELANAVNRFKTAAYTIE 217 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A + LR +G ++GI FQL DD+L Sbjct: 218 RPLHLGAAIAGADDDTIAALRRYGHDIGIAFQLRDDIL 255 >gi|15644283|ref|NP_229335.1| octoprenyl-diphosphate synthase, putative [Thermotoga maritima MSB8] gi|170288987|ref|YP_001739225.1| polyprenyl synthetase [Thermotoga sp. RQ2] gi|46015919|pdb|1V4E|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima gi|46015920|pdb|1V4E|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima gi|4982102|gb|AAD36602.1|AE001800_12 octoprenyl-diphosphate synthase, putative [Thermotoga maritima MSB8] gi|170176490|gb|ACB09542.1| Polyprenyl synthetase [Thermotoga sp. RQ2] Length = 299 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N +L + + IG M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|255326216|ref|ZP_05367302.1| polyprenyl synthase [Rothia mucilaginosa ATCC 25296] gi|255296670|gb|EET76001.1| polyprenyl synthase [Rothia mucilaginosa ATCC 25296] Length = 410 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 93/248 (37%), Gaps = 78/248 (31%) Query: 39 LLSAIRYALLGGKKIRSFL------------VTECASLFNVNHLTALRVGAAIECIHCYS 86 LL AI GGK++R+ L VTE N + ++ G A+E + Sbjct: 72 LLEAIESLSTGGKRLRALLSYWGWRGAGGAPVTE-----NRTSWSIVKAGMAVELFQTSA 126 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEI 130 LIHDD+ +D RRG P+VH +++ I+AG+ + ++ E+ Sbjct: 127 LIHDDI--IDRSDTRRGAPSVHKRFEAAHEQNSWRGDAFNYGLTGGILAGDLTMAWSAEV 184 Query: 131 ISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET------ 175 +S P + D +R+++ L GQ LD+ E ++ Sbjct: 185 FASLGEGAIYGAPARTIFDRMRTEV-------------LAGQYLDVYSEVLETEDAQAAL 231 Query: 176 -QVFMIQKMKTG--------------ALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + + + K+ AL ESGA R FG LG Sbjct: 232 QRALNVIRFKSAKYSCEHPFTIGGALALQAAVLESGASAVSEQHPVLAGYRAFGLPLGEG 291 Query: 221 FQLADDLL 228 FQL DD L Sbjct: 292 FQLRDDEL 299 >gi|46015921|pdb|1V4H|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F52a Mutant Length = 299 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N +L + + IG M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|156405854|ref|XP_001640946.1| predicted protein [Nematostella vectensis] gi|156228083|gb|EDO48883.1| predicted protein [Nematostella vectensis] Length = 427 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 32/162 (19%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SLIHDD+ +D RRGK +++ Y + I+AG+ +L+ Sbjct: 182 EMIHTASLIHDDV--IDRADTRRGKVAINLMYGDKNCILAGDYILS-------------- 225 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFI--------DETQVFMIQKM--KTGA 187 R L ++ N+ +L +++D ++ EF+ DE ++K KT + Sbjct: 226 ---RVSLAIARFGNVEAVKLLA-EIVDELVRGEFMQLGSKENPDERFTHYLKKTYKKTAS 281 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ C++ ++ + + ++ +G N+GI FQL DD+LD Sbjct: 282 LIACCCKTAVLLGDSPPDIQDIAFQYGRNVGIAFQLVDDVLD 323 >gi|71041841|pdb|1WKZ|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima K41a Mutant gi|71041842|pdb|1WKZ|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima K41a Mutant Length = 299 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N +L + + IG M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGEL---GEDLYNLGVTIGTIYQMFDDIMD 208 >gi|227495997|ref|ZP_03926308.1| geranylgeranyl pyrophosphate synthase [Actinomyces urogenitalis DSM 15434] gi|226834485|gb|EEH66868.1| geranylgeranyl pyrophosphate synthase [Actinomyces urogenitalis DSM 15434] Length = 405 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 70/270 (25%), Positives = 110/270 (40%), Gaps = 50/270 (18%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHND------RLLSAIRYALLGGKKIRSFLVTE 60 S L + ++ + +D L Q + ++ D LL A L GGK++R+ L Sbjct: 24 SDLSDTARLVRAGVDARLAQVLQERRARYEDLGEAATELLDAAEVLLKGGKRMRALLAGL 83 Query: 61 CASLFNVNHL-TAL-------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112 +L + TAL GAA+E +L+HDD+ +D RRG+P H + Sbjct: 84 GIALDSHGPARTALLSSPLVASAGAALELYQASALVHDDV--IDAALTRRGEPAAHRRLA 141 Query: 113 EV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 +V AI+ G+ LL+ E + T++ + + + Sbjct: 142 QVHRDHGWLTEPLTFGTSGAILLGDLLLSACGEEMGHAVTEVGVSPAAATAARQAFDRMT 201 Query: 157 QGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCFACES-----------GAIMA 200 + GQ LD++ E + +E V Q M AL +S GA++A Sbjct: 202 SEVAVGQYLDLRSEVVPLPGPEENPVEAGQTMHRNALGVVRRKSARYSVMYPLLIGALLA 261 Query: 201 HASQN--EKERLRCFGENLGIIFQLADDLL 228 + RL FGE +GI FQL DDLL Sbjct: 262 GVDPDCALAARLAQFGEEVGIAFQLRDDLL 291 >gi|55981624|ref|YP_144921.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB8] gi|55773037|dbj|BAD71478.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB8] Length = 312 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 18/225 (8%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 + L+ +R + L +L+ ++ H D L++A GGK+IR LV + Sbjct: 2 TDLEAPLRRFEEALSELVQSDVLFIRLIHQD-LVTA------GGKRIRPRLVFLASRALG 54 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A+E +H +L+HDDL +D+ RRGK +Y ++++G+ LL+ Sbjct: 55 GAPFELE-LALAVELLHSATLLHDDL--IDDAETRRGKEAAFRKYGNAVSVLSGDFLLSR 111 Query: 127 AFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 +I+ + + +L + +++ +L+ LQ Q+ ++D ++ + I KT Sbjct: 112 LLHVIAKTGRMELVERF-AEVAKTLSEGEVLQF----QVAALEDYSLENYE--RIITAKT 164 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 LM A E A++ A +E L +G G FQ+ DD LD Sbjct: 165 AVLMALATEGPALLLGAESGVREALYRYGLLYGQAFQMRDDYLDL 209 >gi|116491791|ref|YP_811335.1| geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1] gi|116092516|gb|ABJ57670.1| Geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1] Length = 335 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 19/163 (11%) Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AAIE +H +L+HDD+ +DN RRG T+ + I G+ L T F +++S Sbjct: 79 AAAIELLHLATLVHDDV--IDNAEKRRGLTTLQNFFGNKNTIYLGDILFTKYFYLLTS-- 134 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192 + H+ ++ +L G+++ +F +T + + K KT L + Sbjct: 135 ------LAPSKEFIAYHSSAMEKVLTGELIQDALKFHKQTTLAEYYQAIKGKTATLFSLS 188 Query: 193 CESGAIMAHASQN------EKERLRCFGENLGIIFQLADDLLD 229 SG + ++ E + FG NLG+ FQ+ DDL D Sbjct: 189 AVSGVWLGKKNKQFDEDNLEFKNAFNFGYNLGMAFQMLDDLKD 231 >gi|254551210|ref|ZP_05141657.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 352 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 61/243 (25%) Query: 26 QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--------VGA 77 + A+HM + ++ + + L GGK++R + H A R + + Sbjct: 18 RAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFA------YWGWHTVASREPDPDVLLLFS 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGN 121 A+E +H ++L+HDDL +D RRG+PT ++Y + AI+ G+ Sbjct: 72 ALELLHAWALVHDDL--IDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGD 129 Query: 122 GLLTYAFEIIS-------SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 +A +I+S +P Q + +IR+++ LGGQ LDI Sbjct: 130 LAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEV-------------LGGQYLDIVA 176 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLAD 225 E + + T C+ + A+ ++ + FG +LG+ FQL D Sbjct: 177 EASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRD 236 Query: 226 DLL 228 D+L Sbjct: 237 DVL 239 >gi|260205469|ref|ZP_05772960.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis K85] gi|289574857|ref|ZP_06455084.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis K85] gi|289539288|gb|EFD43866.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis K85] Length = 352 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 61/243 (25%) Query: 26 QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--------VGA 77 + A+HM + ++ + + L GGK++R + H A R + + Sbjct: 18 RAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFA------YWGWHAVASREPDPDVLLLFS 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGN 121 A+E +H ++L+HDDL +D RRG+PT ++Y + AI+ G+ Sbjct: 72 ALELLHAWALVHDDL--IDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGD 129 Query: 122 GLLTYAFEIIS-------SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 +A +I+S +P Q + +IR+++ LGGQ LDI Sbjct: 130 LAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEV-------------LGGQYLDIVA 176 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLAD 225 E + + T C+ + A+ ++ + FG +LG+ FQL D Sbjct: 177 EASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRD 236 Query: 226 DLL 228 D+L Sbjct: 237 DVL 239 >gi|172040899|ref|YP_001800613.1| putative polyprenyl diphosphate synthase [Corynebacterium urealyticum DSM 7109] gi|171852203|emb|CAQ05179.1| putative polyprenyl diphosphate synthase [Corynebacterium urealyticum DSM 7109] Length = 394 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 51/264 (19%) Query: 5 LPSKLQENSKRIDTILDDLLLQTA---SHMQTQHNDRLLSAIRYALLGGKKIRSFLV--- 58 L + L++ +D LD +A S + + ND + + + GGK++R Sbjct: 27 LRAPLKDVPAAVDRALDAYFDHSAAEFSAIAPEFNDAMAVLRGFVMGGGKRVRPTFAWAG 86 Query: 59 ---------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 + +S+ +V+ + L +A+E + +LIHDD+ +D RRG PT H Sbjct: 87 FRAGLEGGGADGSSIQDVDPASVLLALSALEFVQACALIHDDI--IDESDTRRGNPTTHR 144 Query: 110 QYDE----------------VTAIIAGNGLLTYAFEIISSP--KTQLKDNIRSQLMLSLT 151 ++ AI+AG+ L++A +++++ + D +R T Sbjct: 145 VFESQHRERGWFGSSEHYGISQAILAGDLALSWADDLLATAGLSPSIVDRVRGPWRAMRT 204 Query: 152 HNIGLQGMLGGQMLDI------QDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQ 204 +L GQ LDI + D QV KT + + GA +A A + Sbjct: 205 E------VLAGQQLDIALENNGSESIADAMQVI---NFKTASYTVARPLHIGAALAGADE 255 Query: 205 NEKERLRCFGENLGIIFQLADDLL 228 E L +G +G FQL DD L Sbjct: 256 RTIELLLEYGTLVGQAFQLRDDQL 279 >gi|71041843|pdb|1WL0|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima R44a Mutant gi|71041844|pdb|1WL0|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima R44a Mutant Length = 299 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N +L + + IG M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|305681416|ref|ZP_07404223.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266] gi|305659621|gb|EFM49121.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266] Length = 362 Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 40/214 (18%) Query: 45 YALLGGKKIRSFLV----TECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNG 98 Y L GGK+IR V L N A LR +A+E I +LIHDD+ +D+ Sbjct: 49 YVLTGGKRIRPCYVWAGFVAGGGLRNRGEDPAAVLRAASALELIQACALIHDDI--IDSS 106 Query: 99 YIRRGKPTVH----IQYDE------------VTAIIAGNGLLTYAFEIISSPKTQLK--D 140 RRG PTVH +++E AI+ G+ +A +++ + D Sbjct: 107 DTRRGNPTVHRSAQRRHEEGRWHGDADHFGCSVAILVGDLAFAWADDMVRAAGLSHAALD 166 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMC-FACE 194 I+ T ++GGQ+LDI DE I QV + + KT A Sbjct: 167 RIQPAWRGMRTE------VIGGQLLDIIHEASGDEDIATAQV--VNRFKTAAYTIERPLH 218 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A LR +G ++G+ FQL DD L Sbjct: 219 LGAALAGADAATIAALRAYGTDIGVAFQLRDDQL 252 >gi|325969747|ref|YP_004245939.1| polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28] gi|323708950|gb|ADY02437.1| Polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28] Length = 296 Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 16/199 (8%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLT-ALRVGAAIECIHCYSLIHDDLP 93 DRLL A + + GK IR LV A +L N + A+ A++E IH SL+ DD+ Sbjct: 39 DRLLKATYHYIRNRGKLIRPTLVLLMAYALGNGTGIERAILPAASVELIHTASLLQDDI- 97 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEIISSPKTQLKDNIRSQLMLSLT 151 MD IRRG T + Y TA++A + ++ A F I S + + + S + L++ Sbjct: 98 -MDQQRIRRGVETPYSIYGSHTAMLASDLIIAKAVEFAIRSGDNDIVFELLNSSIKLAVG 156 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERL 210 + L+ L G+ D+++ + KT +L+ + GA + NE R+ Sbjct: 157 QS--LESELSGRDNTTIDDYLK------LIYYKTASLIESSMIVGAYSVNVKDNEVISRI 208 Query: 211 RCFGENLGIIFQLADDLLD 229 R G +GI FQ+ DD++D Sbjct: 209 RDIGRFVGIAFQVRDDVID 227 >gi|52842862|ref|YP_096661.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629973|gb|AAU28714.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 322 Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V ++ + + A +E H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166 + +++ G+ L T + ++ + +K+ +L+L N Q G Q+ + Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMV--EVGIKE------ILNLLANTSHQITCGEVKQLAN 152 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + F + + KT L A G I+ +A + L +G +LG FQL DD Sbjct: 153 RHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIELRNSLYNYGLHLGNAFQLIDD 212 Query: 227 LLD 229 LD Sbjct: 213 ALD 215 >gi|163849265|ref|YP_001637309.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl] gi|222527256|ref|YP_002571727.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl] gi|163670554|gb|ABY36920.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl] gi|222451135|gb|ACM55401.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl] Length = 361 Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 16/148 (10%) Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRS 144 SL+HDDL +D RRG+ TVH ++D A++ G+ A E+ SP ++ Sbjct: 120 SLVHDDL--VDQANRRRGQITVHARWDNDVALMVGDYFFALAAAEMARSPDPRII----- 172 Query: 145 QLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMAH 201 + +Q + G++ + + + F + ++ + KT L AC++G + Sbjct: 173 -----TFYAEAVQTICEGELSPVTVAEPFDKALRQYLYKTGAKTAVLFEAACKAGMVAGG 227 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229 S E L +G +LG+ FQ+ DD+LD Sbjct: 228 GSDEEIAALGSYGYDLGMAFQIIDDVLD 255 >gi|332671664|ref|YP_004454672.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484] gi|332340702|gb|AEE47285.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484] Length = 367 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 27/238 (11%) Query: 11 ENSKRIDT-ILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV 67 E++ R+ T L DLL++ A +H D R+L + LGGK +R L Sbjct: 24 EDATRLATSTLQDLLVERAVR-AGRHADAARVLWEDLASTLGGKLMRPRLTAAAYLGLGG 82 Query: 68 NHLTALR-VGAAIECIHCYSLIHDDLPSMD---------NGYIRR-----GKPTVHIQYD 112 L A+ V AA E +H L+HDD+ D +G RR G P V Sbjct: 83 TDLGAVAPVAAAQEVLHVAMLVHDDVLDHDDVRRGRLNVSGAARRRGLTRGLPAVDADAQ 142 Query: 113 EVTA-IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171 + A I+AG+ L AF +++ +T + ++R +L L G++ + G++LD+ E Sbjct: 143 ALAAGILAGDLALASAFRLVA--RTPVPGDVRERLTDLLAD--GVETAVAGELLDVASET 198 Query: 172 IDETQV--FMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + V ++ +KT C SGA++A A ++ RL LG+ FQL DD Sbjct: 199 LAPADVDALLVAALKTAEYSCRVPLASGAVLAGADEDVLRRLDDVAAALGLAFQLTDD 256 >gi|52550292|gb|AAU84141.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon GZfos37B2] Length = 361 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 28/183 (15%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVH-----------------IQYDEVTAIIAGNG 122 E H ++L+HDD+ +D +RRG TVH Y AI+AG+ Sbjct: 79 EVFHTWTLVHDDV--IDRDCMRRGGYTVHEEFRRRGVDLGYDGDKAAHYGTSLAILAGDV 136 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-----EFIDETQV 177 ++ ++S + D ++ + + +L GQ+ D+Q E + E ++ Sbjct: 137 QQGWSVSLLSELAERGVDPAVVLHLIRMMETDVVIMLLSGQIFDVQYSKAPIESLSEAKI 196 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN-EKERLRC---FGENLGIIFQLADDLLDCEED 233 + KTGAL FA +GA++ ++ N E E +R F G FQL DD+L D Sbjct: 197 LGMLWRKTGALYEFAGAAGAMIGLSTTNRENELVRSISQFTGRCGTAFQLQDDILGVVGD 256 Query: 234 LPK 236 K Sbjct: 257 TKK 259 >gi|15609310|ref|NP_216689.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis H37Rv] gi|15841663|ref|NP_336700.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31793351|ref|NP_855844.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis AF2122/97] gi|121638053|ref|YP_978277.1| putative geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661989|ref|YP_001283512.1| putative geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium tuberculosis H37Ra] gi|148823380|ref|YP_001288134.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis F11] gi|167967239|ref|ZP_02549516.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis H37Ra] gi|215403561|ref|ZP_03415742.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis 02_1987] gi|215411897|ref|ZP_03420671.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis 94_M4241A] gi|215427549|ref|ZP_03425468.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T92] gi|215431104|ref|ZP_03429023.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis EAS054] gi|215446402|ref|ZP_03433154.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T85] gi|218753894|ref|ZP_03532690.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis GM 1503] gi|219558151|ref|ZP_03537227.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T17] gi|224990547|ref|YP_002645234.1| putative geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253798764|ref|YP_003031765.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN 1435] gi|254232327|ref|ZP_04925654.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis C] gi|254364972|ref|ZP_04981018.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis str. Haarlem] gi|260187169|ref|ZP_05764643.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis CPHL_A] gi|260201290|ref|ZP_05768781.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T46] gi|289443678|ref|ZP_06433422.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T46] gi|289447799|ref|ZP_06437543.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis CPHL_A] gi|289554042|ref|ZP_06443252.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN 605] gi|289570287|ref|ZP_06450514.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T17] gi|289745445|ref|ZP_06504823.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis 02_1987] gi|289750767|ref|ZP_06510145.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T92] gi|289754281|ref|ZP_06513659.1| polyprenyl synthetase [Mycobacterium tuberculosis EAS054] gi|289758293|ref|ZP_06517671.1| polyprenyl synthetase [Mycobacterium tuberculosis T85] gi|289762332|ref|ZP_06521710.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis GM 1503] gi|294993558|ref|ZP_06799249.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis 210] gi|297634761|ref|ZP_06952541.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN 4207] gi|297731752|ref|ZP_06960870.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN R506] gi|298525665|ref|ZP_07013074.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis 94_M4241A] gi|306776423|ref|ZP_07414760.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu001] gi|306780200|ref|ZP_07418537.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu002] gi|306784947|ref|ZP_07423269.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu003] gi|306789314|ref|ZP_07427636.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu004] gi|306793640|ref|ZP_07431942.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu005] gi|306798031|ref|ZP_07436333.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu006] gi|306803911|ref|ZP_07440579.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu008] gi|306808482|ref|ZP_07445150.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu007] gi|306968308|ref|ZP_07480969.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu009] gi|306972535|ref|ZP_07485196.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu010] gi|307080242|ref|ZP_07489412.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu011] gi|307084831|ref|ZP_07493944.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu012] gi|313659086|ref|ZP_07815966.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN V2475] gi|2911093|emb|CAA17477.1| PROBABLE GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA2 (GGPPSASE) (GGPP SYNTHETASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE) [Mycobacterium tuberculosis H37Rv] gi|13881916|gb|AAK46514.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|31618943|emb|CAD97048.1| PROBABLE GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA2 (GGPPSASE) (GGPP SYNTHETASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE) [Mycobacterium bovis AF2122/97] gi|121493701|emb|CAL72176.1| Probable geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601386|gb|EAY60396.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis C] gi|134150486|gb|EBA42531.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis str. Haarlem] gi|148506141|gb|ABQ73950.1| putative geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium tuberculosis H37Ra] gi|148721907|gb|ABR06532.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis F11] gi|224773660|dbj|BAH26466.1| putative geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|253320267|gb|ACT24870.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN 1435] gi|289416597|gb|EFD13837.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T46] gi|289420757|gb|EFD17958.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis CPHL_A] gi|289438674|gb|EFD21167.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN 605] gi|289544041|gb|EFD47689.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T17] gi|289685973|gb|EFD53461.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis 02_1987] gi|289691354|gb|EFD58783.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis T92] gi|289694868|gb|EFD62297.1| polyprenyl synthetase [Mycobacterium tuberculosis EAS054] gi|289709838|gb|EFD73854.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis GM 1503] gi|289713857|gb|EFD77869.1| polyprenyl synthetase [Mycobacterium tuberculosis T85] gi|298495459|gb|EFI30753.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis 94_M4241A] gi|308215160|gb|EFO74559.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu001] gi|308326915|gb|EFP15766.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu002] gi|308330351|gb|EFP19202.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu003] gi|308334184|gb|EFP23035.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu004] gi|308337984|gb|EFP26835.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu005] gi|308341669|gb|EFP30520.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu006] gi|308345161|gb|EFP34012.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu007] gi|308349463|gb|EFP38314.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu008] gi|308354094|gb|EFP42945.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu009] gi|308358037|gb|EFP46888.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu010] gi|308361973|gb|EFP50824.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu011] gi|308365602|gb|EFP54453.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis SUMu012] gi|323719268|gb|EGB28412.1| geranylgeranyl pyrophosphate synthetase id [Mycobacterium tuberculosis CDC1551A] gi|326903788|gb|EGE50721.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis W-148] gi|328458527|gb|AEB03950.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium tuberculosis KZN 4207] Length = 352 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 61/243 (25%) Query: 26 QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--------VGA 77 + A+HM + ++ + + L GGK++R + H A R + + Sbjct: 18 RAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFA------YWGWHAVASREPDPDVLLLFS 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGN 121 A+E +H ++L+HDDL +D RRG+PT ++Y + AI+ G+ Sbjct: 72 ALELLHAWALVHDDL--IDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGD 129 Query: 122 GLLTYAFEIIS-------SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 +A +I+S +P Q + +IR+++ LGGQ LDI Sbjct: 130 LAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEV-------------LGGQYLDIVA 176 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLAD 225 E + + T C+ + A+ ++ + FG +LG+ FQL D Sbjct: 177 EASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRD 236 Query: 226 DLL 228 D+L Sbjct: 237 DVL 239 >gi|307611532|emb|CBX01209.1| hypothetical protein LPW_29081 [Legionella pneumophila 130b] Length = 322 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V ++ + + A +E H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166 + +++ G+ L T + ++ + +K+ +L+L N Q G Q+ + Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMV--EVGIKE------ILNLLANTSHQITCGEVKQLAN 152 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + F + + KT L A G I+ +A + L +G +LG FQL DD Sbjct: 153 RHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIEIRNSLYNYGLHLGNAFQLIDD 212 Query: 227 LLD 229 LD Sbjct: 213 ALD 215 >gi|54295495|ref|YP_127910.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens] gi|148358609|ref|YP_001249816.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str. Corby] gi|53755327|emb|CAH16823.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens] gi|148280382|gb|ABQ54470.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str. Corby] Length = 322 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 12/183 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R +V ++ + + A +E H +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166 + +++ G+ L T + ++ + +K+ +L+L N Q G Q+ + Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMV--EVGIKE------ILNLLANTSHQITCGEVKQLAN 152 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + + F + + KT L A G I+ +A + L +G +LG FQL DD Sbjct: 153 RHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIEIRNSLYNYGLHLGNAFQLIDD 212 Query: 227 LLD 229 LD Sbjct: 213 ALD 215 >gi|325001247|ref|ZP_08122359.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1] Length = 383 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 49/244 (20%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRV 75 D + + + + A H+ + L+ + +G GK +RS + AL Sbjct: 41 DRVEETVRRRCAEHVHSMEGAEFLAGVLTDFVGRGKYLRSMFGYLGWRAAAPDSPAALDA 100 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIA 119 A +E +H ++L+ DD+ MD +RRG+PTVH+Q + E A++ Sbjct: 101 VAGLELLHAFALLQDDV--MDGSLLRRGRPTVHVQLAAWHRGQGMSGCPDRFGESGAVLL 158 Query: 120 GNGLLTYAFEIISS---PKTQLK------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170 G+ L +A + + P+ L D +RS+L + GQ D+ +E Sbjct: 159 GDLCLVWAEQAMRESGLPRDALDRGWPRYDAMRSELAV-------------GQFADLLNE 205 Query: 171 F-----IDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +DE V + + K+G E GA MA + L +G +G FQ+ Sbjct: 206 ARRVPTLDE--VMDVLRRKSGNYTVRRPLELGAAMAGGGDDLVALLGDYGTMVGEAFQMR 263 Query: 225 DDLL 228 DD+L Sbjct: 264 DDVL 267 >gi|255322657|ref|ZP_05363801.1| prenyl transferase [Campylobacter showae RM3277] gi|255300218|gb|EET79491.1| prenyl transferase [Campylobacter showae RM3277] Length = 297 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 22/167 (13%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 +L++ A IE IH SL+HDD+ +D+ RRG P+++ + A++ G+ L + F + Sbjct: 48 SLKICAIIELIHLASLLHDDV--IDDADTRRGSPSINASFGTKNAVMLGDILYSKGFYEL 105 Query: 132 SSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVF--MIQKMKTG 186 S ++ I + LS+ G+M+D+ +F D+ + MI KT Sbjct: 106 SKFPYEIAGEISGAVSKLSV-----------GEMMDVDLSAKFNDDKSAYETMIY-YKTA 153 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ A GA++A + + +G+NLG+ FQ+ DD+LD +D Sbjct: 154 VLIEAAAAVGAMLAGL---DASNFKIYGKNLGLAFQIIDDILDVTQD 197 >gi|294633680|ref|ZP_06712238.1| polyprenyl synthetase [Streptomyces sp. e14] gi|292830322|gb|EFF88673.1| polyprenyl synthetase [Streptomyces sp. e14] Length = 304 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 26/206 (12%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104 +L GGK++R L+ E A L + + L A +IE + + LIHDD+ +D+ +RRG Sbjct: 53 SLRGGKRLRVALLYEAARLVTSDAVAGLEEAALSIELLQTHGLIHDDI--VDDSPVRRGA 110 Query: 105 PTVHIQYDEV----------TAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHN 153 +V+ Y E A++AG+ + + +++P + ++R Q M ++ Sbjct: 111 ASVYYAYRERFADRPQTALGLAVLAGDLAAFLSVRVLLTAP---VPRDLR-QAMAAVQAT 166 Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA-CESGAIMAHA--SQNEK 207 G ++ GQ+LD++ +F D + ++ + K+ A + G + A A + +EK Sbjct: 167 AGADTVV-GQILDLERDFGPLPDRATLDLVSEYKSARYSVLAPLQLGLLAAGADPAAHEK 225 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 E R + +GI Q+ DD LD D Sbjct: 226 ELAR-YATLVGISGQMCDDYLDLFAD 250 >gi|241895189|ref|ZP_04782485.1| possible trans-hexaprenyltranstransferase [Weissella paramesenteroides ATCC 33313] gi|241871495|gb|EER75246.1| possible trans-hexaprenyltranstransferase [Weissella paramesenteroides ATCC 33313] Length = 342 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 21/206 (10%) Query: 34 QHNDRLLSAIRYALL-----GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 Q ND+ + ALL GGK +R + N + AA+E +H +LI Sbjct: 47 QANDK---EVEQALLDMFRAGGKMLRPAFAIIIGQFYPGNTSNLKHIAAAVEMLHTATLI 103 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D+ RR P++ ++ + A AG+ L F+ ++ + +R L Sbjct: 104 HDDI--IDDSPERRHAPSIQSKFGKDIAAYAGDYLFAATFKTLAYHTDDMT-LVRQATKL 160 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQN 205 L+ +L G++ + + + ++ KT AL + + GA A Sbjct: 161 -------LEDILTGELTQRTNHYDRHMTLADYKEQIAGKTAALFVLSAQLGAANGDAPDE 213 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 + + F N+G+ FQ+ DD+LD + Sbjct: 214 FVDLVTEFAFNVGMAFQILDDILDYQ 239 >gi|291294415|ref|YP_003505813.1| Polyprenyl synthetase [Meiothermus ruber DSM 1279] gi|290469374|gb|ADD26793.1| Polyprenyl synthetase [Meiothermus ruber DSM 1279] Length = 336 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 27/221 (12%) Query: 26 QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85 + A+ ++ R+L Y GGK +R L+ + + L V AA+E + Sbjct: 26 EAATRLELAQFARMLR--DYPERGGKMLRGTLLVYTGLAYGASLEGVLPVAAALELFQNW 83 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNI 142 +LIHDD+ D RRGKP +H Y A+ AG+ L + ++ + + L + + Sbjct: 84 ALIHDDI--EDASDERRGKPALHKLYGVPLALNAGDALHARQWALLVEAGASRAVLLEFV 141 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQD----EFIDETQVF--MIQKMKTGALMCFACESG 196 R + ++ + M GQ D+ + E + + + + ++ GAL E Sbjct: 142 RMVEQTAQGQHLEMSWM-EGQRFDLGEPDYLEMVGQKAAYYTAVAPLRLGALAA-GAEPP 199 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 AI + A G LGI FQ+ DD+L+ D P K Sbjct: 200 AIFSEA-----------GLKLGIGFQIVDDVLNLMGD-PAK 228 >gi|302557424|ref|ZP_07309766.1| polyprenyl diphosphate synthase [Streptomyces griseoflavus Tu4000] gi|302475042|gb|EFL38135.1| polyprenyl diphosphate synthase [Streptomyces griseoflavus Tu4000] Length = 391 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 46/211 (21%) Query: 49 GGKKIRS-FLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R+ F + TA LR GAA+E + +L+HDD+ MD RRG P Sbjct: 76 GGKRLRAAFAFCGWRAAGGTGDATAVLRTGAALELLQACALVHDDV--MDGSLRRRGGPA 133 Query: 107 VHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 +H++ + +A++AG+ L +A D++ ++ L Sbjct: 134 LHVELARGHWAAGMHGSAEAFGTSSAVLAGDLALAWA------------DDLLTETALGT 181 Query: 151 THNIGLQG--------MLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFA--CESGA 197 H L M+ GQ D+ + + V I +K+ AL A G Sbjct: 182 PHGGRLHEEWRAMRTEMVAGQYRDLHAQAARSSGVDEALDIATLKS-ALYTVARPLALGG 240 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +A A + LR G G+ FQL DDLL Sbjct: 241 SLAGAGDRTLDALRAAGRCAGLAFQLRDDLL 271 >gi|255521547|ref|ZP_05388784.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL J1-175] Length = 126 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 25/51 (49%), Positives = 33/51 (64%) Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD+LD Sbjct: 8 IHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDV 58 >gi|317506600|ref|ZP_07964392.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974] gi|316255109|gb|EFV14387.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974] Length = 378 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 31/229 (13%) Query: 26 QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIE 80 + A+ + Q D + + L GK+IR + + RV AA+E Sbjct: 45 EEAARIGPQFADVVAELSTFVLGSGKRIRPAFAWLGWLGAGGDAAGASAVPVQRVCAALE 104 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------EVTAIIAGNGLL 124 + L HDD+ +D +RRG+P++H +++ E AI+AG Sbjct: 105 LLQAGLLAHDDI--IDQSDLRRGEPSLHRRFEAEHSRERWAGRSERHGEALAILAGELAF 162 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFM 179 +A ++ + + + R + ++GGQ LD+ DE +E + Sbjct: 163 VWADDLAAEGLDAVTEADRPAFRRAWAAM--RSEVIGGQCLDVLAQAGGDE-SEEAAARV 219 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 I+ + E G ++A A + R FGE++G FQL DDLL Sbjct: 220 IRWKTASYTVARPLELGGVLARADEALLTFYRGFGEDVGAAFQLQDDLL 268 >gi|164605006|dbj|BAF98299.1| geranyl-diphosphate synthase [Hevea brasiliensis] Length = 328 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 27/210 (12%) Query: 38 RLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHLTALRVGAAI--------------- 79 +L SA Y + GK++R ++ A+ NV H+ VG + Sbjct: 102 KLASAAEYFFKMGVEGKRLRPTVLLLMATALNV-HIPEQIVGDTLAAELRTRQQCIAEIT 160 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RR +++ A++AG+ LL+ A ++S K Sbjct: 161 EMIHVASLLHDDV--LDDAETRRSISSLNFVMGNKVAVLAGDFLLSRACVAVASLK---N 215 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + S L +++ H + + M QM ++ KT +L+ +C++ A++ Sbjct: 216 TEVVSLLAIAVEHLVTGETM---QMTCTSEQRCSMEYYMKKTYYKTASLISNSCKAIALL 272 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + +G+NLG+ FQL DD+LD Sbjct: 273 AGQTTEVATLAFEYGKNLGLAFQLIDDVLD 302 >gi|317125086|ref|YP_004099198.1| polyprenyl synthetase [Intrasporangium calvum DSM 43043] gi|315589174|gb|ADU48471.1| Polyprenyl synthetase [Intrasporangium calvum DSM 43043] Length = 368 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 39/220 (17%) Query: 39 LLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L+ ++ L GGK +R SFL + + +R+ A++E +L+HDD+ MD Sbjct: 39 LVDSVSRLLSGGKGLRASFLYWGYRAAGAADSDALVRLSASMEFFQAAALLHDDV--MDR 96 Query: 98 GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISS---PKTQL 138 RRG P+ H ++ E AI+AG+ LT+ E+ S+ P L Sbjct: 97 SDTRRGMPSAHRAVADLHRSRGWAGDDARFGEGAAILAGDLCLTWCDELFSTCGLPAEDL 156 Query: 139 K------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 D +R+QLM ++ L+ G LD++ V + K + Sbjct: 157 ARGRGAFDLMRTQLMGGQFLDL-LESARGWDGLDLEARIASARNVIRYKSAK------YT 209 Query: 193 CES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E GA + A + L +G LG FQL DDLL Sbjct: 210 IEHPLLIGARVGGAPEAALGDLSAYGLALGEAFQLRDDLL 249 >gi|149176626|ref|ZP_01855238.1| polyprenyl synthetase [Planctomyces maris DSM 8797] gi|148844505|gb|EDL58856.1| polyprenyl synthetase [Planctomyces maris DSM 8797] Length = 611 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 22/235 (9%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF-------- 65 D IL L +T + +T AI Y L GGK+ R F+ Sbjct: 264 FDQILPPLRTKTEAAARTPLGK--TEAISYDWLKHGGKRFRPFITLAAYDALIKAQQADD 321 Query: 66 ---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + AIE H SLIHDD+ D+ R G+ T+H Q+ AI G+ Sbjct: 322 TAETTYPLGVQKAAMAIEVFHKASLIHDDI--EDDDQYRYGRETLHRQHGTGMAINIGDY 379 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178 L+ + +++ + + S L+ +S H +G G +M + E + Sbjct: 380 LIGVGYRLLNEARADIGAEAASDLIEKMSAAHIRLCEGQ-GAEMAWQESETFELAPLDAL 438 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I +KT A +G M + +E + F ++G+ FQ+ +DL D + D Sbjct: 439 QIYALKTSPAFEAALYAGIRMTGSVGEYEELISSFSRHIGVGFQILNDLKDWQGD 493 >gi|167045407|gb|ABZ10062.1| hypothetical protein ALOHA_HF4000APKG10F15ctg4g8 [uncultured marine crenarchaeote HF4000_APKG10F15] Length = 100 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 17/102 (16%) Query: 14 KRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNH 69 K+I+ +LD +L L T S + ++YAL GGK+IR L +EC + N Sbjct: 10 KKINNVLDSELELYTESEFK--------EPLKYALGGGKRIRPIILLLASECVGEIDDNT 61 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111 A AIE +H S+IHDD+ +DN IRR K HI+Y Sbjct: 62 FAA---ACAIEFLHTESVIHDDI--IDNETIRRQKDPFHIKY 98 >gi|149924264|ref|ZP_01912637.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1] gi|149814889|gb|EDM74454.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1] Length = 394 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/247 (21%), Positives = 103/247 (41%), Gaps = 29/247 (11%) Query: 5 LPSKLQENSKRIDTILDDLLLQ---TASHMQTQHNDRLLS----------AIRYALLGGK 51 +P+ L+ + R+ +L++L+ + + ++ + RL + Y L K Sbjct: 1 MPAYLEGSRARVVAVLEELIAEQRRRSPGIEDRTEGRLEGDPYGPVLYDLMLDYPLREAK 60 Query: 52 KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111 +R L N AL + +E H L+HDD+ D ++RRG PT+H + Sbjct: 61 GLRPALCIATCRALGGNLEAALPTASVLELYHNAFLVHDDV--EDRSHVRRGGPTLHAAH 118 Query: 112 DEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQ 168 + A+ G+G+L + + + L +R + M ++ + GQ +++ Sbjct: 119 GQAIAVNVGDGMLALTLRPLLANIERVGLGPALRILEAMAEMSERT-----VEGQAMELD 173 Query: 169 ------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 E D+ + M+ + GA+ A + E+L F +L + FQ Sbjct: 174 WIRRNTWELSDDDYIEMVVRKTGWYSFIIPTRCGALCARSDPKVCEQLERFARDLSVAFQ 233 Query: 223 LADDLLD 229 + DD+L+ Sbjct: 234 IQDDVLN 240 >gi|224068584|ref|XP_002326151.1| predicted protein [Populus trichocarpa] gi|222833344|gb|EEE71821.1| predicted protein [Populus trichocarpa] Length = 321 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 28/212 (13%) Query: 38 RLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHL------------TALR-----VGA 77 +L SA Y + GK+ R ++ A+ NV L T LR + Sbjct: 8 KLASAAEYFFKMGVQGKRFRPTVLLLMATALNVRILETETGSEGDALTTELRKRQQSIAE 67 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 E IH SL+HDD+ +D+ RRG ++++ A++AG+ LL+ A ++S K Sbjct: 68 ITEMIHVASLLHDDV--LDDADTRRGIGSLNLVMGNKVAVLAGDFLLSRACVALASLKNT 125 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 + + L ++ H + + M QM ++ KT +L+ +C++ A Sbjct: 126 ---EVVTLLATAVEHLVNGETM---QMTSTSEQRCSMEYYMQKTYYKTASLISNSCKAIA 179 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A + +G+NLG+ +QL DD+LD Sbjct: 180 LLAGQTTEVAMLAFEYGKNLGLAYQLIDDVLD 211 >gi|221134874|ref|ZP_03561177.1| Geranylgeranyl pyrophosphate synthase [Glaciecola sp. HTCC2999] Length = 188 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 8/150 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRLRPLLCVLSAQALGITNQQHHHLAAIIEFIHTATLLHDDV--VDESLLRRGRETAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ DN++ +LS N QG + Q++++ Sbjct: 105 ALFGNQASVLVGDFLYSRAFQMMVEL-----DNMKVMRILSDATNRIAQGEV-MQLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAI 198 D E F + KT L A + A+ Sbjct: 159 DPNTTEQSYFDVIYSKTARLFEAATQLAAV 188 >gi|49259556|pdb|1VG4|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F132aL128A MUTANT gi|49259557|pdb|1VG4|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F132aL128A MUTANT Length = 299 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N + L++ M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNNKARRAALNVIGK-----MSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|297565930|ref|YP_003684902.1| Dimethylallyltranstransferase [Meiothermus silvanus DSM 9946] gi|296850379|gb|ADH63394.1| Dimethylallyltranstransferase [Meiothermus silvanus DSM 9946] Length = 319 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 21/187 (11%) Query: 49 GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R +FL + +L V + + + A+E +H +L+HDDL +D+ RRG Sbjct: 43 GGKRVRPQLAFLASR--ALGGVPY--EMELALAVELLHSTTLLHDDL--VDDAETRRGHV 96 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 +Y +++AG+ + +I ++ L + + + ++L Sbjct: 97 AAFRKYGNAVSVLAGD---------YLLSRLLYLLSITGRMELVYMFSEVARELAESEVL 147 Query: 166 DIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q + + +++ KT +LM ACE A++ +A ++ L FG G FQ Sbjct: 148 QFQIAALGDYSFEAYERIITGKTASLMRLACEGAAVLGNAPSEWRQALADFGLFYGQAFQ 207 Query: 223 LADDLLD 229 + DD LD Sbjct: 208 MRDDYLD 214 >gi|300858828|ref|YP_003783811.1| geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis FRC41] gi|300686282|gb|ADK29204.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis FRC41] gi|302331089|gb|ADL21283.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis 1002] gi|308276777|gb|ADO26676.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis I19] Length = 393 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 43/215 (20%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDN 97 + L GGK+IR A N L L +++E I +LIHDD+ +D Sbjct: 77 FVLGGGKRIRPSYA--WAGFLAGNGLEGTEDPEAVLASISSLELIQACALIHDDI--IDA 132 Query: 98 GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 RRG+PTVH + E AI+ G+ +A ++ + + Sbjct: 133 SDSRRGQPTVHRSAEACHRDNSWNGDSAHFGESIAILLGDLAFAWADDM-------FRTS 185 Query: 142 IRSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES-- 195 S ++ T N +GM +GGQ+LD+ E + + + + + E Sbjct: 186 GLSDAAIARTSN-AWRGMRTEVIGGQLLDVFLESAGSESIELAENVNRFKTAAYTIERPL 244 Query: 196 --GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A + LR +G ++G+ +QL DDLL Sbjct: 245 HIGAAIAGADERIVHALRDYGRDIGVAYQLRDDLL 279 >gi|254574320|ref|XP_002494269.1| Hexaprenyl pyrophosphate synthetase [Pichia pastoris GS115] gi|238034068|emb|CAY72090.1| Hexaprenyl pyrophosphate synthetase [Pichia pastoris GS115] gi|328353910|emb|CCA40307.1| hexaprenyl pyrophosphate synthetase,mitochondrial precursor [Pichia pastoris CBS 7435] Length = 489 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 46/198 (23%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF----- 128 R+ +E IH SL+HDD+ +D RRG+P+ ++ + AI+AG+ LL A Sbjct: 192 RLAEVVEMIHTASLLHDDV--IDFSDSRRGRPSGNVAFTNKMAILAGDFLLGRASVELGR 249 Query: 129 ----EIISSPKTQLKDNIRSQLMLSLTHNIGLQ--------------------------- 157 E++ T + + + + M N LQ Sbjct: 250 LRNSEVVELMSTSIANLVEGEFMQ--LKNTVLQPDITMVEGNPTPIPEATGKVPTEISEY 307 Query: 158 ----GMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLR 211 ++ G+ + +E ++ + + K +KT AL+ + S AI+A + Sbjct: 308 SVPGAIVDGKRIITHEENVNAAFDYYLHKTYLKTAALISKSSRSTAILAGCQEEVINNCY 367 Query: 212 CFGENLGIIFQLADDLLD 229 FG NLG+ FQ+ DD+LD Sbjct: 368 RFGRNLGLCFQIVDDMLD 385 >gi|328543228|ref|YP_004303337.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase [polymorphum gilvum SL003B-26A1] gi|326412974|gb|ADZ70037.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase [Polymorphum gilvum SL003B-26A1] Length = 336 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A +F + + A++E +H +L+HDD+ +D +RRGK Sbjct: 55 GGKRLRPMLTLALADMFGYQGSGHVTLSASVEFMHTATLLHDDV--VDESDMRRGKLAAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +G + Q+ + Sbjct: 113 KLWGNQASVLVGDYLLGQAFKMMVDVGS-----LEALRVLAEASAVIAEGEVM-QLGAAK 166 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + KT AL A E G I+A S R +G LG+ FQL DD L Sbjct: 167 NLATSEASYMKVIEAKTAALFAAAAEVGPIIAGQSAETCAAARRYGMELGLAFQLVDDAL 226 Query: 229 D 229 D Sbjct: 227 D 227 >gi|318081668|ref|ZP_07988981.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces sp. SA3_actF] Length = 258 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 34/206 (16%) Query: 49 GGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GG+++RS V C + AL VGAA+E + +L+ DD+ MDN +RRG Sbjct: 59 GGRRLRSAFVWWGLRVACPAPPPGTVAAALTVGAAVELLQSCALVQDDV--MDNSPVRRG 116 Query: 104 KPTVHI---------------QYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146 +P +H+ + + A++AG+ + +A + + P ++ +R Sbjct: 117 QPALHVLLGSTRPAAAGPGALGFGQSAAVLAGDLAMVWAEDTFADAHPPPEVAAPVRRLW 176 Query: 147 MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 + T M+ GQ LD+ D T +K+G + A+ Sbjct: 177 SVLRTE------MIAGQYLDLAGQADASHSATHALRTAVLKSGRYSVARPLELGALLAAA 230 Query: 204 QNEKER-LRCFGENLGIIFQLADDLL 228 E R LR G G+ FQL DDLL Sbjct: 231 PPEVCRVLRAAGGAAGLAFQLRDDLL 256 >gi|239933102|ref|ZP_04690055.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces ghanaensis ATCC 14672] Length = 463 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%) Query: 44 RYALLGGKKIRS----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 R+ GGK++R + + C + ALR+GAA+E + +L+HDD+ MD Sbjct: 101 RFTRTGGKRVRPRFVWWTLRACGGGDGPSVAAALRIGAALELLQTCALVHDDV--MDGST 158 Query: 100 IRRGKPTVHI----QY------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 +RR +P +H+ QY AI+AG+ L +A ++++ +T L Sbjct: 159 LRRARPALHVDVAAQYGGAAPSARAERLGGAAAILAGDLALAWADDLLA--ETPLAPRS- 215 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE----SGAIM 199 ++ + L ++ + M+ GQ LD+ + + ++ E GA + Sbjct: 216 ARAVRRLWADMRTE-MVAGQYLDVHGQATGSRSLPRALHAACLKSALYSVERPIALGAAL 274 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A A +E L G G+ FQL DDL D Sbjct: 275 ADADDATREALGSAGRCAGLAFQLRDDLDD 304 >gi|317127634|ref|YP_004093916.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522] gi|315472582|gb|ADU29185.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522] Length = 326 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 19/153 (12%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLK 139 H SL+HDD+ +D+ R T+H + AI +G+ L +F+I++ S L Sbjct: 81 HMASLVHDDV--IDDADTRHNHATIHTMHGNKFAIYSGDYLFCISFQILAQHASSLAHLD 138 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196 N R G++ +L G++ + F V + ++ KT L +C SG Sbjct: 139 FNTR-----------GMEKILAGELDQLNSRFKPSLSVKSYLSRVAGKTAQLFAISCYSG 187 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A+ A++ + G +G+ FQ+ DD+LD Sbjct: 188 AMEGGATRKQAMNAWNMGHYIGMTFQIMDDILD 220 >gi|328713339|ref|XP_001947197.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Acyrthosiphon pisum] Length = 338 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 12/157 (7%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V E IH SLIHDD+ +D RRGKP+V+ + +AG+ +L +I+ Sbjct: 155 VAMIAEMIHSASLIHDDV--IDQSDFRRGKPSVNALWSHKKVAMAGDYILAVTSMMIARL 212 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFA 192 SQ++ L +Q LG + E +E + K KT +L+ + Sbjct: 213 NHNDVTITLSQIITDLVQGEFMQ--LGSK------ETENERFAHYLTKTYRKTASLIANS 264 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ A++A A + +G N+G+ FQL DDLLD Sbjct: 265 VKAEAMLAGADDQLVDVSFEYGRNIGLAFQLVDDLLD 301 >gi|302206535|gb|ADL10877.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium pseudotuberculosis C231] Length = 372 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 43/215 (20%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDN 97 + L GGK+IR A N L L +++E I +LIHDD+ +D Sbjct: 56 FVLGGGKRIRPSYA--WAGFLAGNGLEGTEDPEAVLASISSLELIQACALIHDDI--IDA 111 Query: 98 GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 RRG+PTVH + E AI+ G+ +A ++ + Sbjct: 112 SDSRRGQPTVHRSAEACHRDNSWNGDSAHFGESIAILLGDLAFAWADDMFRTSGL----- 166 Query: 142 IRSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES-- 195 S ++ T N +GM +GGQ+LD+ E + + + + + E Sbjct: 167 --SDAAIARTSN-AWRGMRTEVIGGQLLDVFLESAGSESIELAENVNRFKTAAYTIERPL 223 Query: 196 --GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A + LR +G ++G+ +QL DDLL Sbjct: 224 HIGAAIAGADERIVHALRDYGRDIGVAYQLRDDLL 258 >gi|221053263|ref|XP_002258006.1| polyprenyl synthetase [Plasmodium knowlesi strain H] gi|193807838|emb|CAQ38543.1| polyprenyl synthetase, putative [Plasmodium knowlesi strain H] Length = 522 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 23/168 (13%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ AA E IH SL+HDD+ +D+ RRG +H +Y +I++G+ LL A + +S Sbjct: 251 RIIAASEIIHMGSLLHDDV--IDDSNNRRGALALHKKYGNKISILSGDFLLARASSVFAS 308 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKM-KTGALM 189 Q+ + ++ ++ G++L +F D + + I+ KT +L Sbjct: 309 IGC-------PQICKRFAY--VVESLIKGELLQTNLKFNNIEDALKTYFIKTYHKTASLF 359 Query: 190 C--FACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLDCEED 233 FAC AI++ +NEK CF G ++G+ FQL DD LD + D Sbjct: 360 SHLFAC--MAILSF--KNEKIINLCFNLGLHIGMAFQLYDDYLDYKPD 403 >gi|294811347|ref|ZP_06769990.1| Putative geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|326439921|ref|ZP_08214655.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|294323946|gb|EFG05589.1| Putative geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 395 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 41/209 (19%) Query: 49 GGKKIRSFL--VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R L V A+ + + L V A++E + LIHDD+ +D+ +RRG+P Sbjct: 92 GGKRLRPLLCVVGWHAAGGDEDPAAVLPVAASLELYQTFVLIHDDI--IDDSALRRGRPA 149 Query: 107 VH-------IQYDEVT------AIIAGNGLLTYAFEII-----SSPKT----QLKDNIRS 144 VH + +D A++AGN L + E++ +P+ ++ D + + Sbjct: 150 VHRALAARHVGHDSAARLGAGEALLAGNLALIWCQELLHTAELDTPRRAAVHRVNDTMLA 209 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHAS 203 ++M + +LG + LD D+ + + I + KT A + A Sbjct: 210 EVMFGQYRD-----LLGTERLD------DDIEAALGIIRYKTAAGTIQRPLQLGVAAGGG 258 Query: 204 QNEKERLRC--FGENLGIIFQLADDLLDC 230 E R C FG LG FQL DDLLD Sbjct: 259 DEETHRF-CTEFGVPLGEAFQLRDDLLDV 286 >gi|149280267|ref|ZP_01886389.1| octaprenyl-diphosphate synthase [Pedobacter sp. BAL39] gi|149228956|gb|EDM34353.1| octaprenyl-diphosphate synthase [Pedobacter sp. BAL39] Length = 323 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 14/177 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IR V A L + R A +E +H +L+HDD+ +DN Y RRG +++ Sbjct: 45 GKQIRPMFVFFAAKLCGGILESTHRGAALVELLHTATLVHDDV--VDNAYERRGFFSINA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ LL ++S + + +L + ++ M G++L I+ Sbjct: 103 LWKNKIAVLVGDYLLAKGL-LLSVNNGEFR-------LLQIVSE-AVKQMSEGELLQIEK 153 Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 I E F + + KT +L+ C GA A A E++R FGE +GI FQ+ Sbjct: 154 VRRMDISEDLYFDVIRQKTASLIASCCACGAASAGADDETIEKMRLFGEKVGIAFQI 210 >gi|327179707|gb|AEA30255.1| putative isoprenyl diphosphate synthase [Streptomyces sp. Acta 2897] Length = 347 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 17/188 (9%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 A+ GGK++R LV A + E +H SL HDD+ MD +R G P Sbjct: 57 AVSGGKRMRPLLVLLGAEFGEEWRDGVVDAAVIAELVHISSLYHDDV--MDGAALRHGVP 114 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-MLGGQM 164 + + ++ E A+ G+ LL A + ++ D +R N + G ++ GQ+ Sbjct: 115 SANARWGERLAVAGGDWLLARAARLAAALG---PDMVR--------FNADVAGDLVEGQL 163 Query: 165 LDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 L++ E V F + KT AL+ A +GA+ A A + L +G LGI F Sbjct: 164 LEMTGPAEGEDPVQHFFRVTSGKTAALLAMALGAGALQAGAPAGQGRSLMEYGHQLGIAF 223 Query: 222 QLADDLLD 229 Q++DDLLD Sbjct: 224 QISDDLLD 231 >gi|198419107|ref|XP_002123764.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase, subunit 1 [Ciona intestinalis] Length = 400 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 12/156 (7%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ E IH SLIHDD+ N +RRGK +V+ + A++ GN ++ A +++SS Sbjct: 153 KISLIAEMIHVGSLIHDDVVDFSN--VRRGKRSVNALCGDHNAVMVGNYVVANASKLLSS 210 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 N +++S + ++G Q D +D+F KT +L+ C Sbjct: 211 I-----GNPEITIIISQIIDDIVRGEFMQQ--DNKDQF---KHYLKKTYKKTASLIANCC 260 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ A ++ + E +G N+G+ FQL DDLLD Sbjct: 261 KAVACLSSNNNEVIEAAYQYGSNIGMAFQLVDDLLD 296 >gi|88856502|ref|ZP_01131159.1| geranylgeranyl pyrophosphate synthase [marine actinobacterium PHSC20C1] gi|88814156|gb|EAR24021.1| geranylgeranyl pyrophosphate synthase [marine actinobacterium PHSC20C1] Length = 372 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 35/181 (19%) Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG-LLTY---AFEII 131 +A+E H +L+HDD+ MD RRG P+ H +++++ A G TY A ++ Sbjct: 88 ASALELFHAAALVHDDI--MDRSDTRRGSPSAHRRFEQMHRDGAWTGNAETYGQSAALLL 145 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQG----------MLGGQMLDIQDE----------F 171 D + + + L L ++ GQ LDI DE Sbjct: 146 GDLLLGWSDELLGRGLAMLPRPAALAARREFMTMRTEVMAGQYLDIHDESAWASYPESEA 205 Query: 172 IDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D Q +I K ++ E+ GA + ++ + LR FG LG+ FQL DD+ Sbjct: 206 LDRAQRVLIYKSAK-----YSVEAPLAVGASLGAGTEEQIAALRAFGLPLGVAFQLRDDV 260 Query: 228 L 228 L Sbjct: 261 L 261 >gi|46015922|pdb|1V4I|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F132a Mutant Length = 299 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N +L + + IG M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNN---KLRRAALNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|291441451|ref|ZP_06580841.1| geranylgeranyl pyrophosphase synthase [Streptomyces ghanaensis ATCC 14672] gi|291344346|gb|EFE71302.1| geranylgeranyl pyrophosphase synthase [Streptomyces ghanaensis ATCC 14672] Length = 453 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 30/211 (14%) Query: 44 RYALLGGKKIRS----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 R+ GGK++R + + C + ALR+GAA+E + +L+HDD+ MD Sbjct: 91 RFTRTGGKRVRPRFVWWTLRACGGGDGPSVAAALRIGAALELLQTCALVHDDV--MDGST 148 Query: 100 IRRGKPTVHI----QY------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 +RR +P +H+ QY AI+AG+ L +A ++++ +T L Sbjct: 149 LRRARPALHVDVAAQYGGAAPSARAERLGGAAAILAGDLALAWADDLLA--ETPLAPRS- 205 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE----SGAIM 199 ++ + L ++ + M+ GQ LD+ + + ++ E GA + Sbjct: 206 ARAVRRLWADMRTE-MVAGQYLDVHGQATGSRSLPRALHAACLKSALYSVERPIALGAAL 264 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A A +E L G G+ FQL DDL D Sbjct: 265 ADADDATREALGSAGRCAGLAFQLRDDLDDV 295 >gi|110638671|ref|YP_678880.1| octaprenyl-diphosphate synthase [Cytophaga hutchinsonii ATCC 33406] gi|110281352|gb|ABG59538.1| octaprenyl-diphosphate synthase [Cytophaga hutchinsonii ATCC 33406] Length = 326 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 36/208 (17%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 D+++S I GK++R V A L NVN T R A IE +H +L+HDD+ Sbjct: 36 DKIMSYI--VKRNGKQMRPMFVFLSAHLAGNVNDSTQ-RGAALIELLHTATLVHDDVVDD 92 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH--- 152 + RRG +++ + A++ G+ LL+ L+LS+ H Sbjct: 93 SD--YRRGMFSINALWKNKIAVLVGDYLLSKG------------------LLLSINHGDF 132 Query: 153 ------NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 + ++ M G++L I+ I+E F I + KT +L+ C G A Sbjct: 133 HLLKIVSNAVREMSEGELLQIEKARNLNINEEIYFEIIRQKTASLIASCCAVGVSSTGAD 192 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE 231 + ER + FGE +G+ FQ+ DDL D E Sbjct: 193 EALVERAKMFGEKIGMAFQVKDDLFDYE 220 >gi|332670673|ref|YP_004453681.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484] gi|332339711|gb|AEE46294.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484] Length = 372 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 52/260 (20%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLGGKKIRS-FLVTECASLF 65 L++ ++D +L D + + ++ +D L + A+ L GGK++R+ F + Sbjct: 10 LEDVRTQVDAVLADHVERLRRELEPTGDDTLPLVDAVARMLSGGKRLRAAFCWWSWRAHG 69 Query: 66 NVNHL----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV------- 114 V T +RVGAA+E +L HDD+ MD RRG P+ H ++ + Sbjct: 70 GVPGTPEAGTVVRVGAALELFQAAALFHDDV--MDESDTRRGMPSAHRAFEAMHVERGLS 127 Query: 115 ---------TAIIAGNGLLT-----YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 AI+ G+ L +A + +P ++ + RS+ + L + Sbjct: 128 GDVRQFGMSAAILLGDLALVASEQEFASALADAPTSRAR---RSRAVYDLMRTE----VT 180 Query: 161 GGQMLDI--------QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKE 208 GQ LD+ D DE++ + + K+ ++ E GA +A A Sbjct: 181 VGQYLDVLAQSLPWGDDPDADESRARAVIRAKSA---RYSVEHPLTLGAALADADDESLA 237 Query: 209 RLRCFGENLGIIFQLADDLL 228 R G LG FQL DDLL Sbjct: 238 ACRQVGLPLGEAFQLRDDLL 257 >gi|297171036|gb|ADI22050.1| geranylgeranyl pyrophosphate synthase [uncultured myxobacterium HF0200_05J13] Length = 339 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 15/186 (8%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GK++R V A A++ + A E +H +L+HDD+ +D G RRG Sbjct: 56 LPGKRVRPLCVVLAARAGGAPFNEAVKQLAIACELVHSATLLHDDV--LDEGSERRGAVA 113 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-- 164 + Y +++ G+ LL A + + S LM + GM+ ++ Sbjct: 114 ARLAYGNSASVLGGDYLLVDALRRVYKTGEH---GLLSDLMDVI------DGMVKAEVAQ 164 Query: 165 LDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 L+ + +F + ++ I KT A+ + +G I S+ + L +G +G+ FQ+ Sbjct: 165 LERRGKFDADRDAYLEIIYGKTAAIFEWGLRAGGIAGGLSEEAAQGLGKYGAAIGMAFQV 224 Query: 224 ADDLLD 229 DD+LD Sbjct: 225 VDDILD 230 >gi|321261930|ref|XP_003195684.1| trans-hexaprenyltranstransferase [Cryptococcus gattii WM276] gi|317462158|gb|ADV23897.1| trans-hexaprenyltranstransferase, putative [Cryptococcus gattii WM276] Length = 483 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 17/169 (10%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T R+ + E IH SL+HDD+ +D +RRG P+ + +I++G+ LL A Sbjct: 217 TQRRLASITEMIHVASLLHDDV--IDASSLRRGTPSAPSTFGNKLSILSGDFLLGRASVA 274 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQK--MKTG 186 ++ +L +L+ ++ N+ ++G + + E T+ F ++K +KT Sbjct: 275 LA----RLGSREVVELLATVIANL-VEGEVMQLRATSEPEKAPTTKGFEDYMRKTYLKTA 329 Query: 187 ALMCFACESGAIMAH-ASQNE-----KERLRCFGENLGIIFQLADDLLD 229 +LM + + ++ S NE K+ +G NLGI FQL DD LD Sbjct: 330 SLMAKSARAAVVLGGCGSVNEEGAWVKDVAYGYGRNLGIAFQLIDDALD 378 >gi|189026971|emb|CAQ55981.1| polyprenyl synthetase [Aphanomyces euteiches] Length = 335 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 83/161 (51%), Gaps = 16/161 (9%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D RRG +V+ + +I+AG+ LL + ++ Sbjct: 121 RLAEITEMIHTASLLHDDV--IDEADTRRGMQSVNKVFGSKMSILAGDFLLARSSICLA- 177 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKM-KTGAL 188 +RS + L + ++ ++ G+++ + ++ I + ++ + KTG+L Sbjct: 178 -------RLRSLEAVELM-STAIEHLVKGEVMQMRHADKNGAISPFEYYLRKNYYKTGSL 229 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 M +C++ I+ S+ E +G +LG+ FQL DD+LD Sbjct: 230 MANSCKASLILGEHSERVCELGFAYGRHLGLAFQLIDDVLD 270 >gi|145225827|ref|YP_001136505.1| trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK] gi|145218313|gb|ABP47717.1| Trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK] Length = 335 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 16/182 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A L + V GA IE +H +L HDD+ MD +RRG P+ Sbjct: 55 GGKRFRPLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSA 112 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ L A + S + I L +T GQM + Sbjct: 113 NARWGNNIAILAGDYLFATASRLTSRLGPEAVRIIADTFALLVT----------GQMRET 162 Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D+ + KT L+ + GA + + + + ERL G +G FQ++ Sbjct: 163 RGAADQVDSVDHYLKVVYEKTACLISASGRFGATFSGSDEAQIERLAKLGGIVGTAFQIS 222 Query: 225 DD 226 DD Sbjct: 223 DD 224 >gi|225021908|ref|ZP_03711100.1| hypothetical protein CORMATOL_01940 [Corynebacterium matruchotii ATCC 33806] gi|224945295|gb|EEG26504.1| hypothetical protein CORMATOL_01940 [Corynebacterium matruchotii ATCC 33806] Length = 368 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 93/216 (43%), Gaps = 44/216 (20%) Query: 45 YALLGGKKIRSFLV----TECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNG 98 Y L GGK+IR V L N A LR +A+E I +LIHDD+ +D+ Sbjct: 49 YVLTGGKRIRPCYVWAGFVAGGGLRNRGEDPAAVLRAASALELIQACALIHDDI--IDSS 106 Query: 99 YIRRGKPTVH----IQYDE------------VTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 RRG PTVH +++E AI+ G+ +A +++ + Sbjct: 107 DTRRGNPTVHRSAQRRHEEGRWHGDADHFGCSVAILVGDLAFAWADDMVRAAGLSHAALD 166 Query: 143 RSQLMLSLTHNIGLQGM----LGGQMLDI-----QDEFIDETQVFMIQKMKTGALMC-FA 192 R Q +GM +GGQ+LDI DE I QV + + KT A Sbjct: 167 RMQPA--------WRGMRTEVIGGQLLDIIHEASGDEDIATAQV--VNRFKTAAYTIERP 216 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A LR +G ++G+ FQL DD L Sbjct: 217 LHLGAALAGADAATIAALRAYGTDIGVAFQLRDDQL 252 >gi|315442465|ref|YP_004075344.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] gi|315260768|gb|ADT97509.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] Length = 329 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 16/182 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A L + V GA IE +H +L HDD+ MD +RRG P+ Sbjct: 49 GGKRFRPLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSA 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ L A + S + I L +T GQM + Sbjct: 107 NARWGNNIAILAGDYLFATASRLTSRLGPEAVRIIADTFALLVT----------GQMRET 156 Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + D+ + KT L+ + GA + + + + ERL G +G FQ++ Sbjct: 157 RGAADQVDSVDHYLKVVYEKTACLISASGRFGATFSGSDEAQIERLAKLGGIVGTAFQIS 216 Query: 225 DD 226 DD Sbjct: 217 DD 218 >gi|108800235|ref|YP_640432.1| polyprenyl synthetase [Mycobacterium sp. MCS] gi|119869363|ref|YP_939315.1| polyprenyl synthetase [Mycobacterium sp. KMS] gi|126435858|ref|YP_001071549.1| polyprenyl synthetase [Mycobacterium sp. JLS] gi|108770654|gb|ABG09376.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. MCS] gi|119695452|gb|ABL92525.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. KMS] gi|126235658|gb|ABN99058.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. JLS] Length = 359 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 26/166 (15%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTY 126 H +L+HDD+ +D RRG PTVH Q+ AI+AG+ L + Sbjct: 87 HACALVHDDV--IDASATRRGLPTVHRLFADRHADRGWHGSSEQFGLSAAILAGDLSLVW 144 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 A +I++S L + R Q + + +I + +LGGQ LDI E V + T Sbjct: 145 ADDIVASVDLPLDAHRRVQRVWA---DIRTE-VLGGQFLDIAAEASGAQTVASAMTVNTY 200 Query: 187 ALMCFACESG-AIMAHASQNEKERLRCF---GENLGIIFQLADDLL 228 + + A A+ + E L F G ++G+ FQL DD+L Sbjct: 201 KTASYTVSRPLQLGAAAAADRPEVLEIFHQLGTDIGVAFQLRDDVL 246 >gi|254467778|ref|ZP_05081184.1| polyprenyl synthetase superfamily protein [beta proteobacterium KB13] gi|207086588|gb|EDZ63871.1| polyprenyl synthetase superfamily protein [beta proteobacterium KB13] Length = 303 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 15/182 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR+ L L N+ T ++ A E IH SLIHDD+ D RRG T+ Sbjct: 52 GKFIRAQLALASGELLNLPKDTVIKWSVACELIHTASLIHDDICDQDEK--RRGLTTIWK 109 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 +Y AI G+ ++ AF+ +S +T I L+ SL+ + ++ ++ GQ+ D+ Sbjct: 110 KYGVPAAICLGDFIIAQAFQKLSEIETGWHQTI---LLNSLS--LSMKKIIVGQVSDVG- 163 Query: 170 EFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D ++ M I KTG L+ + ++E L ++G+ +Q+ Sbjct: 164 --VDIKKISMKDYEQIAYEKTGPLLMTPLDGMFRCKELPESELNGLNKLMNSIGLAYQMI 221 Query: 225 DD 226 +D Sbjct: 222 ND 223 >gi|307324885|ref|ZP_07604090.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306889383|gb|EFN20364.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 355 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 29/203 (14%) Query: 46 ALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 A+ GK++R+ F ++ + +R A++E +H +++HDDL +D+ +R G+ Sbjct: 51 AVADGKRLRAAFCYWGWRAVGQPDSDALVRAAASMELVHAAAVVHDDL--IDDSPLRHGR 108 Query: 105 PTVHIQYDEVT-------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 PT HI A++ G+ L++ A ++ ++ R++ + SL Sbjct: 109 PTAHIALRAAVRRRPRAVAAARSLAMLVGDLLMSLAGQMFATSGLPAAYLARARPLWSLL 168 Query: 152 HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQN 205 + ++ G+ L+I D T + + KT + E G +A A Q Sbjct: 169 A----RELIAGECLEILRTGADPDTTASLKVIRYKTAK---YTVEQPLLIGGALAGAGQR 221 Query: 206 EKERLRCFGENLGIIFQLADDLL 228 +E +G LG FQL DDLL Sbjct: 222 LREGYSAYGLPLGEAFQLRDDLL 244 >gi|261209912|ref|ZP_05924212.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC341] gi|260840977|gb|EEX67509.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC341] Length = 243 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 77/147 (52%), Gaps = 8/147 (5%) Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 ++HDD+ +D +RRGK T + + +++ G+ + T +F+++ T+L +++ Sbjct: 1 MLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILK 53 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 ++S N+ +G + Q+++ D E + KT L A + GAI+ AS Sbjct: 54 LMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEV 112 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G+ LG FQL DD++D D Sbjct: 113 ELAMQNYGKYLGTAFQLIDDVMDYTSD 139 >gi|326790007|ref|YP_004307828.1| trans-hexaprenyltranstransferase [Clostridium lentocellum DSM 5427] gi|326540771|gb|ADZ82630.1| Trans-hexaprenyltranstransferase [Clostridium lentocellum DSM 5427] Length = 321 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 14/187 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR A + A +E H +L+HDD+ +D+ +RRGK TV Sbjct: 45 GKMIRPGFSIIAAKFGEYEEERTRVLAAVMEFFHMATLVHDDV--IDDAKLRRGKETVQS 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 +Y + A+ G+ L F++++S + I S+ M + G++ + Sbjct: 103 KYGKDYAVYIGDYLFCICFKLLASTASLQSIQIDSKAMSRICL---------GEVEQLNS 153 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF---GENLGIIFQLADD 226 F V K +G S I A S +K+ R F G N+G+ FQ+ DD Sbjct: 154 RFDKNVSVKNYLKRVSGKTAELFSLSLYIGAAESNCDKKLSRLFWNIGHNIGMAFQIIDD 213 Query: 227 LLDCEED 233 +LD D Sbjct: 214 ILDYVSD 220 >gi|325282325|ref|YP_004254866.1| Geranyltranstransferase [Deinococcus proteolyticus MRP] gi|324314134|gb|ADY25249.1| Geranyltranstransferase [Deinococcus proteolyticus MRP] Length = 343 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 28/205 (13%) Query: 49 GGKKIRSFLVTECASLFNV--------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 GGK++R + A V +H AL + IE +H SL+HDDL +D+ Sbjct: 57 GGKRLRPLVTLLSAQALQVGAPEDAGGHHGDALALAICIELLHSASLLHDDL--IDDADT 114 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG+ +Y V ++++G+ +L ++S +L R LT G + Sbjct: 115 RRGQEAAFRRYGNVVSVMSGDFMLARLLMLLS----ELPAAAR------LTRAFGEVASV 164 Query: 161 --GGQMLDIQ-DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 G++L Q + + T Q I KT AL+ A + A++ AS +++ LR +G Sbjct: 165 ICEGEVLQFQVAAYGNPTPEQYSRIIYGKTAALLELAAAAPALLLGASAAQEQALRQYGR 224 Query: 216 NLGIIFQLADDLLDC---EEDLPKK 237 LG+ FQ+ DDLLD EEDL K Sbjct: 225 ELGMAFQIRDDLLDLLGREEDLGKP 249 >gi|289804959|ref|ZP_06535588.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 235 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 6/134 (4%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRGK T + + +++ G+ + T AF++++S +++ ++S N+ +G Sbjct: 4 MRRGKATANAAFGNAASVLVGDFIYTRAFQMMTS-----LGSLKVLEVMSEAVNVIAEGE 58 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + Q++++ D I E + KT L A + I+A + +++ L+ +G LG Sbjct: 59 VL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGT 117 Query: 220 IFQLADDLLDCEED 233 FQL DDLLD D Sbjct: 118 AFQLIDDLLDYSAD 131 >gi|333022534|ref|ZP_08450598.1| putative geranylgeranyl pyrophosphase synthase [Streptomyces sp. Tu6071] gi|332742386|gb|EGJ72827.1| putative geranylgeranyl pyrophosphase synthase [Streptomyces sp. Tu6071] Length = 467 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 34/211 (16%) Query: 49 GGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GG+++RS V C + AL VGAA+E + +L+ DD+ MDN +RRG Sbjct: 72 GGRRLRSAFVWWGLRVACPAPPPGTVAAALTVGAAVELLQSCALVQDDV--MDNSPVRRG 129 Query: 104 KPTVHI---------------QYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146 +P +H+ + + A++AG+ + +A + + P ++ +R Sbjct: 130 QPALHVLLGSTRAAAAGPGALGFGQSAAVLAGDLAMVWAEDTFADAHPPPEVAAPVRRLW 189 Query: 147 MLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 + T M+ GQ LD+ D T +K+G + A+ Sbjct: 190 SVLRTE------MIAGQYLDLAGQADASHSATHALRTAVLKSGRYSVARPLELGALLAAA 243 Query: 204 QNEKER-LRCFGENLGIIFQLADDLLDCEED 233 E R LR G G+ FQL DDLL D Sbjct: 244 PPEVCRVLRAAGGAAGLAFQLRDDLLAVWGD 274 >gi|254577169|ref|XP_002494571.1| ZYRO0A04620p [Zygosaccharomyces rouxii] gi|238937460|emb|CAR25638.1| ZYRO0A04620p [Zygosaccharomyces rouxii] Length = 468 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 38/192 (19%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL---TYAFEI 130 R+ +E IH SL+HDD+ +D+ RRG+ + ++ + A++AG+ LL T A Sbjct: 174 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRASGNVAFTNKMAVLAGDFLLGRATVAISR 231 Query: 131 ISSPKT-----------------QLKDNIRSQLMLSLTHNIGLQGM---LGGQMLDIQ-- 168 + +P+ QLK+ + + N L L ++ D + Sbjct: 232 LRNPEVVELMSNSIANLVEGEFMQLKNTAVEDISIINQGNKPLPAASKKLNNEVHDYRVP 291 Query: 169 ---------DEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 D+ I+ + + K +KT AL+ + + AI++ + ++ FG+++ Sbjct: 292 RAVGEGISHDQMIETAFDYYLHKTYLKTAALISKSSRAAAILSGVDRTVVDQCYEFGKDI 351 Query: 218 GIIFQLADDLLD 229 GI FQL DD+LD Sbjct: 352 GICFQLVDDMLD 363 >gi|257067655|ref|YP_003153910.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM 4810] gi|256558473|gb|ACU84320.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM 4810] Length = 382 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 26/216 (12%) Query: 35 HNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLP 93 H D L A A GGK+ R L+ F H A++VGAA+E +H +I DD+ Sbjct: 32 HGD-LWQAFARATEGGKRARPVLLLAAHEAFGGGRHEAAVQVGAALELLHTSFVIQDDV- 89 Query: 94 SMDNGYIRRGKP----TVHIQYDEVTAIIAGN-------GLLTYAFEIISSPKTQLKDNI 142 +D RRG P +V + E A AG+ G+L ++++ + + + Sbjct: 90 -IDGDETRRGAPNLPGSVAAEAREQGASPAGSRRLGVAAGILAGDLGLVAALRAVARCDA 148 Query: 143 RSQL---MLSLTHNIGLQGMLGGQMLDIQDEFIDETQ------VFMIQKMKTGAL-MCFA 192 + +L L + L G++ D++ + Q + ++KT A Sbjct: 149 PGPVVDRLLDLFEST-LHTSAAGELADVRLQLTPAEQPAALRDALAVAELKTAAYSFQLP 207 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +GA++A A + L G LGI FQL DDLL Sbjct: 208 LHAGALLAGARPAQLTALDEVGALLGIGFQLIDDLL 243 >gi|67527046|gb|AAY68315.1| putative geranylgeranyl pyrophosphate synthetase [uncultured marine bacterium 66A03] Length = 338 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 9/179 (5%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R+ + F + L +A+E +H SLIHDD+ D IRR +V Sbjct: 55 GKQLRAKIALSAGEKFGADDAACLHWASAVELLHNASLIHDDI--CDGDTIRRNNASVWA 112 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 +Y A+ G+ ++ AF+ ++ + ++ L+ L++++ + + GQ L+ + Sbjct: 113 KYGRDIALALGDWMIAEAFQ-QAAKAAHVSNSF--NLVTKLSNHV--KSTIAGQALEFDN 167 Query: 170 E-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + D + I KT L A E A +A S+ E + + +GI +Q A+D+ Sbjct: 168 ALYPDIDKYLEISAGKTAPLFVAAIEGIAEIAGRSE-LIEEINHYFVTMGICYQFANDI 225 >gi|291449452|ref|ZP_06588842.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] gi|291352399|gb|EFE79303.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] Length = 348 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 26/197 (13%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A + + A+E IH +SLIHDD+ MD RR +PT+ Sbjct: 59 GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 116 Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLG----GQM 164 Y A++AG+ L A ++ +P +R L G LG GQ Sbjct: 117 AYGTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQ-----------LAGALGDLVHGQA 165 Query: 165 LDIQDEFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 D+ E + + + KTG+L+ A GA +A A + E L G + Sbjct: 166 QDLLFESRPWSGPGAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRH 225 Query: 217 LGIIFQLADDLLDCEED 233 +G+ FQ DDLL D Sbjct: 226 VGVAFQAVDDLLGIWGD 242 >gi|119504024|ref|ZP_01626105.1| IdsA [marine gamma proteobacterium HTCC2080] gi|119460027|gb|EAW41121.1| IdsA [marine gamma proteobacterium HTCC2080] Length = 346 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 12/192 (6%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y + GG+ R L A +F + + +IE +H LIHDD+ D RRGK Sbjct: 46 YPMRGGRMFRPSLCIATAKVFGASLEQVIPAAVSIELLHNALLIHDDIE--DESDERRGK 103 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 PT+H + A+ AG+ L + II + D+I L + Q GQ Sbjct: 104 PTLHKKIGTPLALNAGDSLAFLSLRPIIRGSASMGSDSIVRILE---EFDQMAQQTAEGQ 160 Query: 164 MLDI------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 LD+ E + + M+ K F GA++ + + L F L Sbjct: 161 ALDLGWRRDNHIELCEADYLKMVLKKTCWLTTLFPIRLGALIGSGGRANLDSLFNFAFFL 220 Query: 218 GIIFQLADDLLD 229 G FQ+ DD+L+ Sbjct: 221 GAAFQIQDDVLN 232 >gi|320582142|gb|EFW96360.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS) [Pichia angusta DL-1] Length = 469 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 41/194 (21%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF----- 128 R+ E IH SL+HDD+ +D RRG+ + ++ + AI+AG+ LL A Sbjct: 175 RLAEITEMIHTASLLHDDV--IDFSDSRRGRDSGNVAFSNKMAILAGDFLLGRASVSLGR 232 Query: 129 ----EIISSPKTQLKDNIRSQLM----LSLTHNIGLQGMLGGQMLDI------------- 167 E++ T + + + + M + NIG Q GG + I Sbjct: 233 LRNSEVVELMSTAIANLVEGEFMQLKNTVMQPNIG-QIEDGGVVKQIPEPTGKVPVEVHE 291 Query: 168 ----------QDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 +E ++ + + K +KT +LM + S AI+A +++ E FG Sbjct: 292 YSVKTPETISHEENVEAAFQYYLHKTYLKTASLMSKSSRSAAILAGCNEDVIENCYQFGR 351 Query: 216 NLGIIFQLADDLLD 229 NLG+ FQ+ DD+LD Sbjct: 352 NLGLCFQIVDDMLD 365 >gi|119713545|gb|ABL97597.1| crtE geranylgeranyl diphosphate synthase [uncultured marine bacterium EB0_39F01] gi|161170296|gb|ABX59266.1| short chain isoprenyl diphosphate synthase IdsA [uncultured marine bacterium EB000_55B11] gi|297183824|gb|ADI19947.1| hypothetical protein [uncultured marine bacterium EB000_55B11] Length = 335 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 2/83 (2%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R+ + + ASL ++ T+L A+E +H SLIHDD+ D RRG+ ++ + Sbjct: 56 GKMLRAKMAIQSASLAEIDISTSLLWAGAVEVLHNASLIHDDI--CDGDKQRRGRESIWV 113 Query: 110 QYDEVTAIIAGNGLLTYAFEIIS 132 ++ TA+ G+ L+ +FE+ S Sbjct: 114 KFGRDTALTLGDWLIALSFELAS 136 >gi|313681119|ref|YP_004058858.1| polyprenyl synthetase [Oceanithermus profundus DSM 14977] gi|313153834|gb|ADR37685.1| Polyprenyl synthetase [Oceanithermus profundus DSM 14977] Length = 329 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 13/192 (6%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GGK +R LV A + + AL V AA+E + L+HDD+ D+ RRG+ Sbjct: 37 YPERGGKMLRGRLVVLTARAYG-DDTAALGVAAALELFQNWVLVHDDI--EDDSDERRGR 93 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT---HNIGLQGMLG 161 P +H A+ AG+ L + +++ + K + ++ T ++ L L Sbjct: 94 PALHRLVPMPLALNAGDALHAAMWRLLAEAGARRKVLLEFAELVETTASGQHLDLSWTLE 153 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 G+ D++++ M+++ GA++A + G LG+ F Sbjct: 154 GRFDLTPDDYLE-----MVRRKAAYYTAVAPLRLGALVAGRMPDPA--FARAGLELGVAF 206 Query: 222 QLADDLLDCEED 233 Q+ DD+L+ E D Sbjct: 207 QIVDDVLNLEGD 218 >gi|315186189|gb|EFU19951.1| Polyprenyl synthetase [Spirochaeta thermophila DSM 6578] Length = 357 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 34/224 (15%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RL +R GK +R LV A + RVGAA+E L+HDD+ M Sbjct: 45 ERLFGFVRR----GKLVRGALVWAGARVCGGAPEEWCARVGAALELFQSGLLVHDDV--M 98 Query: 96 DNGYIRRGKPTVHIQYD---------------EVTAIIAGNGLLTYAFEIISSPKTQLKD 140 D +RRG P++ QY+ E A+ G+ F +++ Sbjct: 99 DRDRVRRGGPSMFAQYEGRADEEGVREARRVGEALAVCVGDVAFFLGFGLLAGVGRGAA- 157 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGAL-MCFACES 195 +R L+ + G+ QM D+ + V + + KTG Sbjct: 158 -MRDALLRCVAEEYARVGVA--QMDDVWYGATGGGVSLDDVLRVYRYKTGRYTFSVPLSL 214 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADD---LLDCEEDLPK 236 GA++A A + + L GE LG++FQ+ DD L EE++ K Sbjct: 215 GALLAGADEGVRGALEEVGELLGVVFQIRDDELGLFGSEEEIGK 258 >gi|148273051|ref|YP_001222612.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830981|emb|CAN01926.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 373 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 55/260 (21%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYA---LLGGKKIRS-FLVTECASLFNVNHLT 71 + T LDD L A+ ++ D L+ ++ L GGK+ R+ F S+ ++ Sbjct: 11 VQTRLDDFLAAQAAGLREISPD-LVPIQEFSSDLLRGGKRFRAQFCYWGWRSVIDLEPSP 69 Query: 72 ALR--------------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----- 112 A R V A +E H +L+HDD+ +D RRG+P H +++ Sbjct: 70 AGRPQGEERPGYRAVVGVAAGLEIFHAAALVHDDI--IDRSDTRRGRPAAHRRFEALHAA 127 Query: 113 -----------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 E A + G+ LL ++ E++ L D ++ + + Q LG Sbjct: 128 SGWGGSSASFGEAGATLLGDLLLGWSDELLIDSLLALADGSAARATRAELAMMRTQVTLG 187 Query: 162 GQMLDIQDEFIDETQ-------------VFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 Q LD+ +E T V+ K A + GA +A A+ + Sbjct: 188 -QYLDVLEEVAWPTVPEEDTLARAHNVIVYKSAKYSIEAPLVV----GANLAGATPEQVT 242 Query: 209 RLRCFGENLGIIFQLADDLL 228 LR G LGI FQL DD+L Sbjct: 243 ALRAVGLPLGIAFQLRDDVL 262 >gi|46015923|pdb|1V4J|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima V73y Mutant gi|46015924|pdb|1V4J|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima V73y Mutant Length = 299 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELYHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N +L + + IG M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|255578548|ref|XP_002530137.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis] gi|223530362|gb|EEF32253.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis] Length = 417 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG +++ A++AG+ LL+ A ++S K Sbjct: 166 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVAVLAGDFLLSRACVALASLKNT-- 221 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + S L + H + + M QM ++ KT +L+ +C++ A++ Sbjct: 222 -EVVSLLATVVEHLVTGETM---QMTSTSEQRCSMEYYMQKTYYKTASLISNSCKAIALL 277 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + +G+NLG+ FQL DD+LD Sbjct: 278 AGQTAEVAMLAFEYGKNLGLAFQLIDDVLD 307 >gi|300784232|ref|YP_003764523.1| geranylgeranyl pyrophosphate synthase [Amycolatopsis mediterranei U32] gi|299793746|gb|ADJ44121.1| geranylgeranyl pyrophosphate synthase [Amycolatopsis mediterranei U32] Length = 363 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 90/218 (41%), Gaps = 38/218 (17%) Query: 40 LSAIR-YALLGGKKIRSFLVT-----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + A+R + L GGK++R + L+ A++E I +LIHDDL Sbjct: 40 IDALRGFVLGGGKRLRPTFAWWGWRGAGGDPAGPDAEGVLQAVASLELIQACALIHDDL- 98 Query: 94 SMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISS---P 134 +D+ RRG PTVHI + TA++ G+ L +A ++ + P Sbjct: 99 -IDSSDSRRGNPTVHIAGAKLHADRGWLGSPATFGLATAVLVGDLALAWADDMFADADLP 157 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMC- 190 L R T +L GQ LD++ + + V I ++KT A Sbjct: 158 AETLA-AARPAWRAMRTE------VLAGQYLDVRTQATGDASVEAALKIDRLKTAAYTVQ 210 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA + A+ L FG +G+ FQL DDLL Sbjct: 211 RPLHLGAALGGAAPELIATLLEFGGEVGVAFQLRDDLL 248 >gi|302688307|ref|XP_003033833.1| hypothetical protein SCHCODRAFT_233425 [Schizophyllum commune H4-8] gi|300107528|gb|EFI98930.1| hypothetical protein SCHCODRAFT_233425 [Schizophyllum commune H4-8] Length = 382 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 27/198 (13%) Query: 52 KIRSFLVTECASLFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + R L+T A +V AL R+ +E IH SL+HDD+ +D RRG + Sbjct: 91 RPRLILLTALAVNASVGERDALPQQVRLAEVVEMIHVVSLLHDDV--IDESDTRRGDMSA 148 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQG------- 158 +Y +I+AG+ +L A +I++ D +R + ++ +L +Q Sbjct: 149 PARYGNKNSILAGDFVLGRAMSLIAT--LGHFDAMREIAGVVTTLVEGEIIQAEDSIALS 206 Query: 159 --MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC--FG 214 GQ D +++ ++F +KTG+L A S A+++ +++ L +G Sbjct: 207 DKARAGQAADQWGSYME--RIF----LKTGSLFARALRSTAMLSGLPSDDERVLAVGDYG 260 Query: 215 ENLGIIFQLADDLLDCEE 232 LG+ FQ+ DD LD +E Sbjct: 261 TELGLAFQIIDDALDFKE 278 >gi|82659078|gb|ABB88703.1| geranyl pyrophosphate synthase [Solanum lycopersicum] Length = 415 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 8/150 (5%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG +++ A++AG+ LL+ A ++S K Sbjct: 164 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNT-- 219 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + L + H + + M QM DE KT +L+ +C++ A++ Sbjct: 220 -EVVCLLATVVEHLVTGETM---QMTTSSDERCSMEYYMQKTYYKTASLISNSCKAIALL 275 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A S +G+NLG+ FQL DD+LD Sbjct: 276 AGHSAEVSVLAFDYGKNLGLAFQLIDDVLD 305 >gi|239946000|ref|ZP_04697937.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 15998] Length = 323 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 26/197 (13%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A + + A+E IH +SLIHDD+ MD RR +PT+ Sbjct: 34 GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 91 Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLG----GQM 164 Y A++AG+ L A ++ +P +R L G LG GQ Sbjct: 92 AYGTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQ-----------LAGALGDLVHGQA 140 Query: 165 LDIQDEFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 D+ E + + + KTG+L+ A GA +A A + E L G + Sbjct: 141 QDLLFESRPWSGPGAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRH 200 Query: 217 LGIIFQLADDLLDCEED 233 +G+ FQ DDLL D Sbjct: 201 VGVAFQAVDDLLGIWGD 217 >gi|170117033|ref|XP_001889705.1| predicted protein [Laccaria bicolor S238N-H82] gi|164635285|gb|EDQ99594.1| predicted protein [Laccaria bicolor S238N-H82] Length = 325 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 20/226 (8%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73 + DTILD L Q+ +L + GK+IR L+ + NV T L Sbjct: 3 KYDTILDTL--SAKPTWSAQNESAILEPFTFITSNPGKEIRGKLIEAFNTWLNVPTDTLL 60 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-- 131 + + +H SL+ DD+ D+ +RRGKP H Y I N + A++ + Sbjct: 61 VITKVVNMLHAASLMVDDIE--DDSQLRRGKPVAHKIYGIPQTINTANYVYFLAYQELFA 118 Query: 132 ------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 +SP + D + ++ +LSL GL+ +L L E E + M+ KT Sbjct: 119 LRNNPTTSPPRKDLDALVTEELLSLHRGQGLE-ILWRDSLQCPSE---EEYISMVNN-KT 173 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 G L+ + +MA + N +G+ FQ+ DDL++ + Sbjct: 174 GGLLRMGVK--IMMACGTTNIGVDYVPLVNLIGVFFQIRDDLMNLQ 217 >gi|328954813|ref|YP_004372146.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase [Coriobacterium glomerans PW2] gi|328455137|gb|AEB06331.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Coriobacterium glomerans PW2] Length = 363 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 85/195 (43%), Gaps = 17/195 (8%) Query: 44 RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 R++ GGK+ R + A + AL V AIE +LIHDD+ D G RRG Sbjct: 70 RFSRNGGKRHRPLICMLAARAVGGDAAAALDVATAIEHFQSAALIHDDIA--DRGNTRRG 127 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIG--LQGML 160 P +H+ E AI G+ E+IS L D N+ +L + L + + + Sbjct: 128 APCLHVTEGEGIAINCGD------LELISMTAAVLDDANLGDELKIRLLRELVEMTRRTI 181 Query: 161 GGQMLDI---QDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GQ LD+ +D D E + M + GAI + + E LR FG Sbjct: 182 EGQALDLGWARDARYDLTVEDYLDMATRKTAWYSGAVPLACGAIAGGGCEVQVEGLRSFG 241 Query: 215 ENLGIIFQLADDLLD 229 G+ FQ+ DDL++ Sbjct: 242 LACGLAFQIQDDLIN 256 >gi|49259559|pdb|1VG7|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F132aL128AI123AD62A MUTANT Length = 299 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 + +N + L++ M ++++ + I + + I + K+GAL A + Sbjct: 122 EAGNNKARRAALNVIGK-----MSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALL---EGELGEDLYNLGVTIGTIYQMFDDIMD 208 >gi|239992468|ref|ZP_04713132.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL 11379] Length = 349 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 26/197 (13%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A + + A+E IH +SLIHDD+ MD RR +PT+ Sbjct: 60 GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 117 Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLG----GQM 164 Y A++AG+ L A ++ +P +R L G LG GQ Sbjct: 118 AYGTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQ-----------LAGALGDLVHGQA 166 Query: 165 LDIQDEFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 D+ E + + + KTG+L+ A GA +A A + E L G + Sbjct: 167 QDLLFESRPWSGPGAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRH 226 Query: 217 LGIIFQLADDLLDCEED 233 +G+ FQ DDLL D Sbjct: 227 VGVAFQAVDDLLGIWGD 243 >gi|118586922|ref|ZP_01544355.1| trans-hexaprenyltranstransferase, component II [Oenococcus oeni ATCC BAA-1163] gi|118432649|gb|EAV39382.1| trans-hexaprenyltranstransferase, component II [Oenococcus oeni ATCC BAA-1163] Length = 325 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 17/156 (10%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H +LIHDD+ +D RRG ++ Q+ + TA+ +G+ L F +++ + + Sbjct: 80 HMATLIHDDV--IDESPTRRGMSSIQKQFGQSTAVYSGDYLFVVCFNLLA----EYASDF 133 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC-----ESGA 197 R N L G + QM++ D I Q F KTG L A ESG Sbjct: 134 RGIQQYGHHMNAILNGEMT-QMVERYDLNISIDQYFKQISGKTGQLFSLATFLGAYESGN 192 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + A EK G N+G+ FQL DD+LD ++ Sbjct: 193 KIKFAKNAEK-----IGLNIGVSFQLMDDILDYTDN 223 >gi|283458392|ref|YP_003363016.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18] gi|283134431|dbj|BAI65196.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18] Length = 410 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 95/248 (38%), Gaps = 78/248 (31%) Query: 39 LLSAIRYALLGGKKIRSFL------------VTECASLFNVNHLTALRVGAAIECIHCYS 86 LL AI GGK++R+ L VTE + +++ ++ G A+E + Sbjct: 72 LLEAIESLSTGGKRLRALLSYWGWRGAGGAPVTENRASWSI-----VKAGMAVELFQTSA 126 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEI 130 LIHDD+ +D RRG P+VH +++ I+AG+ L ++ E+ Sbjct: 127 LIHDDI--IDRSDTRRGAPSVHKRFEAAHEQNSWRGDAFNYGLTGGILAGDLTLAWSAEV 184 Query: 131 ISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET------ 175 +S P + D +R++ +L GQ LD+ E ++ Sbjct: 185 FASLGEGAIYGAPARTIFDRMRTE-------------VLAGQYLDVYSEVLETEDAQAAL 231 Query: 176 -QVFMIQKMKTG--------------ALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + + + K+ AL A E+G R FG LG Sbjct: 232 QRALNVIRFKSAKYSCEHPFTIGGALALQATALENGTGAVSEQHPVLAGYRAFGLPLGEG 291 Query: 221 FQLADDLL 228 FQL DD L Sbjct: 292 FQLRDDEL 299 >gi|111221595|ref|YP_712389.1| geranylgeranyl pyrophosphate synthase [Frankia alni ACN14a] gi|111149127|emb|CAJ60810.1| Geranylgeranyl pyrophosphate synthase (Farnesyl diphosphate synthase, Bifunctional short chain isoprenyl diphosphate synthase) [Frankia alni ACN14a] Length = 358 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 37/213 (17%) Query: 47 LLGGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 L GGK++R +F + + AA+E +H +L+HDD+ MD +RRG P Sbjct: 42 LSGGKQVRPAFCYWGWRGAGGPDCDEIVTAAAALEVLHACALVHDDV--MDGSQLRRGAP 99 Query: 106 T-------VHIQ---------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 + VH + + AI+ G+ LT+A +++ + + L ++ + Sbjct: 100 SAQRRLTLVHRRARLGGDPDTFGRSAAILLGDLFLTWADDLLMA--SGLTPGALARAWPT 157 Query: 150 LTHNIGLQGMLGGQMLDIQDEF-------------IDETQVFMIQKMKT-GALMCFACES 195 G ++ GQ LD+ + +D +V I + KT G + + Sbjct: 158 YARMRGE--LVAGQYLDLASQVGPGASQGGAGGGQVDPARVARIARYKTAGYTVVRPLQL 215 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA++A + E FG LG FQL DD+L Sbjct: 216 GALLAGSRPGLLETYAAFGHPLGEAFQLRDDVL 248 >gi|283783163|ref|YP_003373917.1| polyprenyl synthetase [Gardnerella vaginalis 409-05] gi|298253930|ref|ZP_06977517.1| geranylgeranyl pyrophosphate synthase [Gardnerella vaginalis 5-1] gi|283441784|gb|ADB14250.1| polyprenyl synthetase [Gardnerella vaginalis 409-05] gi|297532073|gb|EFH71048.1| geranylgeranyl pyrophosphate synthase [Gardnerella vaginalis 5-1] Length = 368 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 39/214 (18%) Query: 49 GGKKIRSFLVTEC-------ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 GGK++R+ L ++ ++ + + A+E +LIHDD+ +D Y+R Sbjct: 55 GGKRLRALLTISAFYAASKETNIQKIHEQSVFDIACALEVFQTAALIHDDI--IDESYLR 112 Query: 102 RGKPTVHIQYDEV---------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML---- 148 RGKP+ + +V ++ G+ L T +F+I + + K+ + +L Sbjct: 113 RGKPSAYCALSKVCNNKHIGTGLGLMLGDLLATESFDI---ARNRAKNFTYGEELLAAFA 169 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACES-GAIMA 200 S+ N+G+ GQ+LD+ E + + + KT + A + G + A Sbjct: 170 SMQRNVGI-----GQVLDLSIEMMQLDNPIQLAESSLNVFRWKTASYTTVAPLTLGFLAA 224 Query: 201 HASQNEKERL-RCFGENLGIIFQLADDLLDCEED 233 + E L G +LG+ FQ+ADDLLD D Sbjct: 225 NMQPTEAYNLANSIGNSLGVAFQIADDLLDIVSD 258 >gi|116491107|ref|YP_810651.1| geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1] gi|290890612|ref|ZP_06553683.1| hypothetical protein AWRIB429_1073 [Oenococcus oeni AWRIB429] gi|116091832|gb|ABJ56986.1| Geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1] gi|290479740|gb|EFD88393.1| hypothetical protein AWRIB429_1073 [Oenococcus oeni AWRIB429] Length = 325 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 17/156 (10%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H +LIHDD+ +D RRG ++ Q+ + TA+ +G+ L F +++ + + Sbjct: 80 HMATLIHDDV--IDESPTRRGMSSIQKQFGQSTAVYSGDYLFVVCFNLLA----EYASDF 133 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC-----ESGA 197 R N L G + QM++ D I Q F KTG L A ESG Sbjct: 134 RGIQQYGHHMNAILNGEMT-QMVERYDLNISIDQYFKQISGKTGQLFSLATFLGAYESGN 192 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + A EK G N+G+ FQL DD+LD ++ Sbjct: 193 KIKFAKNAEK-----IGLNIGVSFQLMDDILDYTDN 223 >gi|153799412|gb|ABS50482.1| NapT7 [Streptomyces sp. CNQ525] Length = 357 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 41/207 (19%) Query: 49 GGKKIR-SFLVT-ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R +F +T A+ + + A +E +H +LIHDD+ +DN RRGKPT Sbjct: 66 GGKRVRPTFCITGYLAAGGDPRDPGIVAAAAGLEMLHVSALIHDDI--LDNSAQRRGKPT 123 Query: 107 VHIQY----------------DEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLS 149 +H Y E I+ GN L Y+ E++ +P L + R L Sbjct: 124 IHTLYGDLHDSHGWRGESRRFGEGIGILIGNLALVYSQELVCQAPPAVLAEWHR----LC 179 Query: 150 LTHNIGLQGMLGGQMLDI--QDEFIDETQVF-MIQKMKTGALMCFACESGAIMAHASQNE 206 NI GQ LD+ EF + Q+ ++ +K+G + +M + + Sbjct: 180 SEVNI-------GQCLDVCAAAEFSADPQLSRLVALIKSGR---YTIHRPLVMGANAASR 229 Query: 207 KERLRC---FGENLGIIFQLADDLLDC 230 + +GE +G FQL DDLLD Sbjct: 230 PDLAAAYVEYGEAVGEAFQLRDDLLDA 256 >gi|126180126|ref|YP_001048091.1| polyprenyl synthetase [Methanoculleus marisnigri JR1] gi|125862920|gb|ABN58109.1| Polyprenyl synthetase [Methanoculleus marisnigri JR1] Length = 295 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 24/228 (10%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN 66 +E ++I ++D + +TA + SA+ L GK++R+ L+ A L Sbjct: 3 PFREFLEKIRPVVDRRIAETAGG-----EGEIDSAVLALLSKGKRMRAGLLLYIHAGLAR 57 Query: 67 VNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 T AL + A+E H SLI DD+ +D RRG P++H+ E A++ G+L Sbjct: 58 TAAPTRQALDLACAVELAHAASLILDDM--LDGDTARRGVPSLHLTRGEGRAVLDAVGIL 115 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + +++P + + + + + MLGG L E D I K Sbjct: 116 ALPYA-LAAPYGAGYVTMLASAQRKMARGVAWE-MLGGPDLPAA-ELYDA-----IVARK 167 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLD 229 TG L A GA++ + E + FGE G Q+ADD+ D Sbjct: 168 TGCLFSLAAAWGAMV---TGKEDAVVAAFGEFGLAAGKAMQVADDIAD 212 >gi|49259558|pdb|1VG6|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F132aL128AI123A Mutant Length = 299 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 + +N + L++ M ++++ + I + + I + K+GAL A + Sbjct: 122 EAGNNKARRAALNVIGK-----MSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|323454000|gb|EGB09871.1| hypothetical protein AURANDRAFT_36976 [Aureococcus anophagefferens] Length = 439 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 25/189 (13%) Query: 50 GKKIRSFLVTECASLFNVNHL---------TALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 GK+ R +V A V H R+G E IH SLIHDD+ +D+ Sbjct: 150 GKRFRPTIVALMAKALPVVHARDDAETCKAKQDRLGQITEMIHVASLIHDDV--LDDADT 207 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RRG +H Y A+++G+ LL A +++ + + + ++ + SL G Q Sbjct: 208 RRGGDAIHKMYSNKVAVLSGDYLLARASVLLARLQHKQVVEVMAKALDSLLGKDGKQ--- 264 Query: 161 GGQMLDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMA-----HASQNEKERLRCFG 214 + +I E ++++ + KT +L+C A +S A++A A+ E +G Sbjct: 265 --KKSEIAARDAKEMELYLRKSYYKTASLICDASKSCALLAGHDFDSATARAAEE---YG 319 Query: 215 ENLGIIFQL 223 +LG+ FQ+ Sbjct: 320 YHLGLAFQI 328 >gi|29420495|dbj|BAC66492.1| farnesyl diphosphate synthase [Streptomyces argenteolus] Length = 346 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 92/191 (48%), Gaps = 17/191 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK IR LV A AL A+E H +SL+HDD+ MD RR +PT Sbjct: 61 GGKAIRPALVLLAAEAVGGAADAALPAAVAVELAHNFSLLHDDV--MDGDRTRRHRPTAW 118 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + AI+AG+ LL AF+++++ P I +Q +L GQ Sbjct: 119 TVFGVSPAILAGDALLALAFDVLATAGHPAAPEATRI---------FGAAIQELLEGQNA 169 Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D+ E ++ + ++ KTGAL+ AC GA++ + + E LR FG +LG+ FQ Sbjct: 170 DMAFERRQDVELAECLVMAAGKTGALLGCACALGALLGGGAPEQVEHLRAFGRDLGLAFQ 229 Query: 223 LADDLLDCEED 233 L DDLL D Sbjct: 230 LVDDLLGIWGD 240 >gi|328884962|emb|CCA58201.1| Octaprenyl-diphosphate synthase or Dimethylallyltransferase or Geranyltranstransferase (farnesyldiphosphate synthase) or Geranylgeranyl pyrophosphate synthetase [Streptomyces venezuelae ATCC 10712] Length = 349 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 9/149 (6%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLK 139 H ++L+HDD+ +D RR + T + A+IAG+ + A +++ P + Sbjct: 97 HNFTLLHDDI--VDEDVTRRHRATAWTVFGVPDALIAGDAMSALALRMLAEDPHPASAAA 154 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + ++ L G Q + ++ +DE + KTGAL+ +C GA+ Sbjct: 155 SARLAACIIELC--AGQQADCAFEQRGPREVSLDE--CLAMATAKTGALLGASCAIGALY 210 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228 A A + E + FG G+ FQL DDL+ Sbjct: 211 AGAGEEEVAAMDAFGREAGLAFQLIDDLI 239 >gi|68474524|ref|XP_718635.1| hypothetical protein CaO19.7478 [Candida albicans SC5314] gi|46440414|gb|EAK99720.1| hypothetical protein CaO19.7478 [Candida albicans SC5314] Length = 510 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 56/210 (26%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN---GLLTYAFEI 130 R+ +E IH SL+HDD+ +D RRG+P+ +I + A++AG+ G + A Sbjct: 199 RLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 256 Query: 131 ISSPKT-----------------QLKDNI--------------------RSQLMLSLTHN 153 + +P+ QLK+ + + + + H Sbjct: 257 LRNPEVIELLSTTIANLVEGEFMQLKNTVLQNNNNDEIFNDGDVKSIPQPTGKVPTKLHQ 316 Query: 154 IGLQ-------GMLGGQMLD---IQDEFIDETQVF--MIQK--MKTGALMCFACESGAIM 199 +Q G GG D + D I+ F + K +KT +LM +C + A++ Sbjct: 317 YSVQQQQRTTNGGNGGDSADAAVVVDHEINVEAAFEYYLHKTYLKTASLMSKSCRAAAVL 376 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A + E FG NLG+ FQ+ DD+LD Sbjct: 377 SGAQDDIIENCYQFGRNLGLCFQIVDDMLD 406 >gi|308177871|ref|YP_003917277.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117] gi|307745334|emb|CBT76306.1| putative farnesyltranstransferase [Arthrobacter arilaitensis Re117] Length = 368 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 52/190 (27%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE----------------VTA 116 +R+G A+E +LIHDD+ +DN RRG+P+VH +++ +A Sbjct: 86 VRLGVALELFQAAALIHDDI--IDNSDTRRGQPSVHKRFEAQHQELELAGSARNYGMASA 143 Query: 117 IIAGNGLLTYAFEI---ISSPKTQLK---DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170 I+ G+ L+ + E+ ISS Q + + +R+Q+M GQ LD+ +E Sbjct: 144 ILTGDLCLSLSEEVFSEISSLTAQARTIFNQMRTQVM-------------AGQYLDVLEE 190 Query: 171 FIDET--------QVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLG 218 + I + K+ ++ E+ G +A AS++ E F LG Sbjct: 191 SAGPAYDPKEAVKRARTIVRFKSAK---YSTENPFLLGGALAGASESLMEHYSAFALPLG 247 Query: 219 IIFQLADDLL 228 FQL DD+L Sbjct: 248 EAFQLRDDVL 257 >gi|303282127|ref|XP_003060355.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457826|gb|EEH55124.1| predicted protein [Micromonas pusilla CCMP1545] Length = 311 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 14/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG ++++ AI+AG+ LL A ++S Sbjct: 54 RLAEITELIHVASLLHDDV--LDHAATRRGLRALNLEVGNKLAILAGDFLLARASVTLAS 111 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMC 190 +R+ +++L + L+ ++ G QM D F KT +L+ Sbjct: 112 --------LRNTEVIALLSRV-LEHLVTGEVMQMTAKADRLTSFDHYFQKTYFKTASLIA 162 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + ++ ++ E +G +LG+ FQ DD+LD Sbjct: 163 NSAKAIVLLGGHDVTTAESAYQYGRHLGLAFQFQDDVLD 201 >gi|255023840|ref|ZP_05295826.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-208] Length = 145 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 55/93 (59%), Gaps = 3/93 (3%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R +F + + + + A+ + AA+E +H +LIHDD+ +D+ +RRG PT+ Sbjct: 46 GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 H +Y A+ G+ L F+I+S+ + +++ Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSVEN 136 >gi|330469543|ref|YP_004407286.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] gi|328812514|gb|AEB46686.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] Length = 355 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 26/205 (12%) Query: 44 RYALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 R+ L GGK++R F + + + AA+E H ++LIHDD+ +D RR Sbjct: 46 RFVLAGGKRLRPLFCYWGWRAAGGPDSTPIVTAAAALELFHAFALIHDDI--LDGSDRRR 103 Query: 103 GKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 G+P+VH Y TA++ G+ ++ ++ + R Sbjct: 104 GEPSVHRIFADLHTRSSWRGDPEAYGRNTALLCGDLCAAWSDQMFHECGLDAESVHRGYA 163 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGAL-MCFACESGAIMAHAS 203 + SL ++ G+ LD+ + + +MK + + GA +A AS Sbjct: 164 VFSLMRT----EVIAGEYLDLVSGVGGGSVASALTVIRMKAARYTVTRPLQIGATLAGAS 219 Query: 204 QNEKERLRCFGENLGIIFQLADDLL 228 + L FG+ LG FQL DD+L Sbjct: 220 SELVDALAEFGDPLGDAFQLRDDVL 244 >gi|302689483|ref|XP_003034421.1| hypothetical protein SCHCODRAFT_106878 [Schizophyllum commune H4-8] gi|300108116|gb|EFI99518.1| hypothetical protein SCHCODRAFT_106878 [Schizophyllum commune H4-8] Length = 382 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 27/198 (13%) Query: 52 KIRSFLVTECASLFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + R L+T A +V AL R+ +E IH SL+HDD+ +D RRG + Sbjct: 91 RPRLILLTALAVNASVGERDALPQQVRLAEIVEMIHVVSLLHDDV--IDESDTRRGDLSA 148 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQG----MLG 161 ++ +I+AG+ +L A +I++ + D +R + ++ +L +Q LG Sbjct: 149 PSKFGNKNSILAGDFVLGRAMSLIAA--LENFDAMREIAGVVTTLVEGEIIQAEDSIALG 206 Query: 162 -----GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC--FG 214 GQ D +++ ++F +KTG+L A S A+++ +++ L +G Sbjct: 207 EKAKVGQAADQWGSYME--RIF----LKTGSLFARALRSTAMLSGLPSDDERVLAVGDYG 260 Query: 215 ENLGIIFQLADDLLDCEE 232 LG+ FQ+ DD LD +E Sbjct: 261 TELGLAFQIIDDALDFKE 278 >gi|187736086|ref|YP_001878198.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835] gi|187426138|gb|ACD05417.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 336 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 8/180 (4%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R LV A +R+GA +E +H SL+HDD+ +D RR + T + Sbjct: 53 GKMLRPALVLLVAGATGGIKPAHIRLGALLEMVHLASLVHDDV--IDEADKRRDEATANA 110 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ L ++A + T+ + + + N+ QG + Q + D Sbjct: 111 LWGNSLAVLLGDVLFSHAMVL----GTEFGSTEFCRRLANTVRNV-CQGEVA-QSSRLYD 164 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + F I + KT +L A ++ + +E L G+ LG+ +Q+ DD LD Sbjct: 165 LSMTREEYFEIIRKKTASLFSAATGGAGWISGVTPEVEESLYQLGDLLGVAYQIYDDCLD 224 >gi|158979015|gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Mentha x piperita] Length = 313 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 12/144 (8%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SP 134 I +H + +H+ LP D G KP + +Y ++ G+G++ + FE+++ Sbjct: 116 IHLVHAAAYVHEHLPLTD-GSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPA 174 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQ---KMKTGALMC 190 +T D I ++++ ++ G +GM+ G L ++E +D T + I+ K K G + Sbjct: 175 RTDDPDRIL-RVIIEISRAGGPEGMISG--LHREEEIVDGNTSLDFIEYVCKKKYGEMHA 231 Query: 191 FACESGAIMAHASQNEKERLRCFG 214 GAI+ A++ E ++LR FG Sbjct: 232 CGAACGAILGGAAEEEIQKLRNFG 255 >gi|148887805|gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Mentha haplocalyx var. piperascens] Length = 313 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 12/144 (8%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SP 134 I +H + +H+ LP D G KP + +Y ++ G+G++ + FE+++ Sbjct: 116 IHLVHAAAYVHEHLPLTD-GSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPA 174 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQ---KMKTGALMC 190 +T D I ++++ ++ G +GM+ G L ++E +D T + I+ K K G + Sbjct: 175 RTDDPDRIL-RVIIEISRAGGPEGMISG--LHREEEIVDGNTSLDFIEYVCKKKYGEMHA 231 Query: 191 FACESGAIMAHASQNEKERLRCFG 214 GAI+ A++ E ++LR FG Sbjct: 232 CGAACGAILGGAAEEEIQKLRNFG 255 >gi|296454314|ref|YP_003661457.1| polyprenyl synthetase [Bifidobacterium longum subsp. longum JDM301] gi|296183745|gb|ADH00627.1| Polyprenyl synthetase [Bifidobacterium longum subsp. longum JDM301] Length = 360 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 33/206 (16%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L + + +T R A AIE +L+HDD+ +D +RR Sbjct: 52 GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 108 Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152 GKP+ H ++ AI G GL+ T EI ++L + N ++ L++ Sbjct: 109 GKPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTNALNEAFLTMQR 168 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFACESGAIMAHASQN 205 + + GQ+LD+ E + + + + + KT + A A++A Sbjct: 169 EVEI-----GQILDLAVEMTPLSDPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 223 Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229 ++ R G LG+ FQLADDLLD Sbjct: 224 DQARHCALAVGRPLGLAFQLADDLLD 249 >gi|54024172|ref|YP_118414.1| polyprenyl synthase [Nocardia farcinica IFM 10152] gi|54015680|dbj|BAD57050.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152] Length = 385 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 23/197 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GK++R+ L CA L AL + E H SL+HDD+ D +RR P Sbjct: 101 GKRVRAGLALACAQLIPSPDAAPVHDALDIACVWEMFHESSLVHDDI--CDGSPLRRDAP 158 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLG 161 +V + A AG L A ++++ + DN + +T+ L + Sbjct: 159 SVPAAFGVRRAARAGFHLAGKALQVLAR---VIADNPAAFGTVGTAAGVTYLDRLSDLSL 215 Query: 162 GQMLDIQDEFIDETQV----FMIQKMKTGALMCFACESGAIMAHASQNEKERLR---CFG 214 GQ+++ +D + + KTG L AC G A E +RLR + Sbjct: 216 GQLVETIPPTVDHRALRGHYARVAAAKTGTLFRLACAYGGT---AGALEHDRLRDLMDYA 272 Query: 215 ENLGIIFQLADDLLDCE 231 E L FQ+ DD+ D + Sbjct: 273 ERLAFAFQVMDDVRDVD 289 >gi|152967171|ref|YP_001362955.1| polyprenyl synthetase [Kineococcus radiotolerans SRS30216] gi|151361688|gb|ABS04691.1| Polyprenyl synthetase [Kineococcus radiotolerans SRS30216] Length = 365 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 41/255 (16%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLV----- 58 P + + + +LD+ L AS ++ D +L AI L GGK++R Sbjct: 9 PVATSDLRRAVSDVLDEFLRDQASVLREVSEDCAPVLDAISALLSGGKRLRPAFCYWGFH 68 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---- 114 L + +TA A++E +LIHDD+ MD+ RRG+P H +++ + Sbjct: 69 GTGGELPDEGIVTA---AASLELFQAAALIHDDV--MDDSDTRRGQPAAHRRFEALHARS 123 Query: 115 ------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 A++AG+ L ++ E+ S + R + + N+ ++GG Sbjct: 124 GWDGSRERFGLAGAVLAGDLCLGWSDELFSRARLAPDALDRGRRIF----NVMRTQLMGG 179 Query: 163 QMLDI-----QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCF 213 Q LD+ D+ + V +++ T ++ E G +A AS + F Sbjct: 180 QYLDMLEQASSDQRGTDGAVDRARRVVTFKSAKYSIEHPLLLGGSLAGASTDLLADYSRF 239 Query: 214 GENLGIIFQLADDLL 228 G LG FQL DD+L Sbjct: 240 GLALGEAFQLRDDVL 254 >gi|51598574|ref|YP_072762.1| octaprenyl-diphosphate synthase [Borrelia garinii PBi] gi|51573145|gb|AAU07170.1| octaprenyl-diphosphate synthase [Borrelia garinii PBi] Length = 347 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 14/193 (7%) Query: 49 GGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GG +IR L+ A L N ++ +E H SLI DD+ DN RRG+ Sbjct: 57 GGDRIRPMLMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIE--DNSLKRRGRS 114 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 +H+ Y +I AGN L Y ++ LK+N +L++ + L + GQ + Sbjct: 115 AIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENYFTTLSNLHLGQGI 170 Query: 166 DIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 DI+ + +I + ++ + ++KT +L A AI+ + K+ F + LG+ F Sbjct: 171 DIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKLYSTFLK-LGVYF 229 Query: 222 QLADDLLDCEEDL 234 Q+ DD+ + + + Sbjct: 230 QIIDDIKNIKNKI 242 >gi|282162809|ref|YP_003355194.1| polyprenyl synthetase [Methanocella paludicola SANAE] gi|282155123|dbj|BAI60211.1| polyprenyl synthetase [Methanocella paludicola SANAE] Length = 342 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 13/185 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +RS + + + AL AA+E +H +SLIHDD+ D RR + T+ Sbjct: 56 GKSLRSTMCLLACEAISGDSNKALPAAAAVELLHNFSLIHDDIE--DGDVKRRHRDTLWK 113 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLD 166 + AI G+ A +I ++ L + +M+ + N + + GQ LD Sbjct: 114 LWGVPQAINTGD-----AMDIAANLSLLDLDGTVEPGMMVDIIRIFNQTVIELCEGQYLD 168 Query: 167 IQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + + + V M KT AL+ + GA++A ++ R FG +GI FQ+ Sbjct: 169 MDFQGRSDVSVGEYITMVSGKTAALIEASTAIGAMVATGDRDVISRFGTFGRKIGIAFQI 228 Query: 224 ADDLL 228 DD+L Sbjct: 229 RDDIL 233 >gi|111115139|ref|YP_709757.1| octaprenyl-diphosphate synthase [Borrelia afzelii PKo] gi|216263882|ref|ZP_03435876.1| octaprenyl-diphosphate synthase [Borrelia afzelii ACA-1] gi|110890413|gb|ABH01581.1| octaprenyl-diphosphate synthase [Borrelia afzelii PKo] gi|215979926|gb|EEC20748.1| octaprenyl-diphosphate synthase [Borrelia afzelii ACA-1] Length = 347 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 14/193 (7%) Query: 49 GGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR ++ A L N+ ++ +E H SLI DD+ DN RRG Sbjct: 57 GGKRIRPMIMILLAYALGLKEKNNKLIYKLSLLLELPHSGSLIIDDIE--DNSLKRRGAS 114 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 +H+ Y +I AGN L Y ++ LK+N +L++ L + GQ + Sbjct: 115 AIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTLSNLHLGQGI 170 Query: 166 DIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 DI+ + +I + ++ + ++KT +L A AI+ + K+ F + LG+ F Sbjct: 171 DIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFLK-LGVYF 229 Query: 222 QLADDLLDCEEDL 234 Q+ DD+ + + + Sbjct: 230 QIIDDIKNIKNKI 242 >gi|315586238|gb|ADU40619.1| polyprenyl synthetase [Helicobacter pylori 35A] Length = 307 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 AL + A +E I SL+HDD+ +D +RR P+++ + A+I G+ + AF + Sbjct: 59 ALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVILGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S +L+ N L+ G +I+D F+ D+ + + I + KT Sbjct: 117 SK---------MGELIAKALSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|219684533|ref|ZP_03539476.1| octaprenyl-diphosphate synthase [Borrelia garinii PBr] gi|219671895|gb|EED28949.1| octaprenyl-diphosphate synthase [Borrelia garinii PBr] Length = 347 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 14/202 (6%) Query: 40 LSAIRYALLGGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L AI GGK+IR ++ A L N ++ +E H SLI DD+ D Sbjct: 48 LPAIEIINRGGKRIRPMIMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIE--D 105 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRG +H+ Y +I AGN L Y ++ LK+N +L++ L Sbjct: 106 NSLKRRGGSAIHLIYGTDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTL 161 Query: 157 QGMLGGQMLDIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 + GQ +DI+ + +I + ++ + ++KT +L A AI+ + K+ Sbjct: 162 SNLHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKIYST 221 Query: 213 FGENLGIIFQLADDLLDCEEDL 234 F + LG+ FQ+ DD+ + + + Sbjct: 222 FLK-LGVYFQIIDDIKNIKNKI 242 >gi|6449050|gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita] gi|10637873|emb|CAC10560.1| gpp synthase small subunit [Mentha x piperita] Length = 313 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 12/144 (8%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SP 134 I +H + +H+ LP + +G KP + +Y ++ G+G++ + FE+++ Sbjct: 116 IHLVHAAAYVHEHLP-LTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPA 174 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQ---KMKTGALMC 190 +T D I ++++ ++ G +GM+ G L ++E +D T + I+ K K G + Sbjct: 175 RTDDPDRIL-RVIIEISRAGGPEGMISG--LHREEEIVDGNTSLDFIEYVCKKKYGEMHA 231 Query: 191 FACESGAIMAHASQNEKERLRCFG 214 GAI+ A++ E ++LR FG Sbjct: 232 CGAACGAILGGAAEEEIQKLRNFG 255 >gi|58271024|ref|XP_572668.1| trans-hexaprenyltranstransferase [Cryptococcus neoformans var. neoformans JEC21] gi|134114824|ref|XP_773710.1| hypothetical protein CNBH1650 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256338|gb|EAL19063.1| hypothetical protein CNBH1650 [Cryptococcus neoformans var. neoformans B-3501A] gi|57228927|gb|AAW45361.1| trans-hexaprenyltranstransferase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 483 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 25/173 (14%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T R+ + E IH SL+HDD+ +D+ +RRG P+ + +I++G+ LL A Sbjct: 217 TQRRLASITEMIHVASLLHDDV--IDSSSLRRGTPSAPSTFGNKLSILSGDFLLGRASVA 274 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVF--MIQK-- 182 ++ +L +L+ ++ N ++ G+M+ + + E + F ++K Sbjct: 275 LA----RLGSREVVELLATVIAN-----LVEGEMMQLRATSEPEKAPTAKGFEDYMRKTY 325 Query: 183 MKTGALMCFACESGAIMAH-ASQNE-----KERLRCFGENLGIIFQLADDLLD 229 +KT +LM + + I+ S +E K+ +G NLGI FQL DD LD Sbjct: 326 LKTASLMAKSARAAVILGGCGSVSEEGAWVKDVAYGYGRNLGIAFQLIDDALD 378 >gi|328862405|gb|EGG11506.1| hypothetical protein MELLADRAFT_102532 [Melampsora larici-populina 98AG31] Length = 429 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 39/176 (22%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127 R+ E IH SL+HDD+ +D RR P+ ++ +I+AG+ LL A Sbjct: 166 RLAEISEMIHVASLLHDDV--IDKASSRRSIPSAPHEFGNKLSILAGDFLLARASIGLAR 223 Query: 128 ------FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 E+ISS + N+ ++ L N G I +E+++++ Sbjct: 224 LGSLEVVELISS----IISNLVEGELMQLNSN-------GKSNHQIWNEYLEKSY----- 267 Query: 182 KMKTGALMCFACESGAIMA----HASQNEKERLR----CFGENLGIIFQLADDLLD 229 +KT +LM ++ H E E+++ FG++LGI FQ+ DD+LD Sbjct: 268 -LKTASLMAKTARCATVLGGCGIHQGWEEGEKIKDGVYQFGKHLGIAFQIIDDVLD 322 >gi|289526778|pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium gi|289526779|pdb|3KRA|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium gi|289526782|pdb|3KRC|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ipp gi|289526783|pdb|3KRC|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ipp gi|289526786|pdb|3KRF|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (I) gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (I) gi|289526790|pdb|3KRO|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (Ii) gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (Ii) gi|289526794|pdb|3KRP|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp Length = 274 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 12/144 (8%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SP 134 I +H + +H+ LP D G KP + +Y ++ G+G++ + FE+++ Sbjct: 69 IHLVHAAAYVHEHLPLTD-GSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPA 127 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQ---KMKTGALMC 190 +T D I ++++ ++ G +GM+ G L ++E +D T + I+ K K G + Sbjct: 128 RTDDPDRIL-RVIIEISRAGGPEGMISG--LHREEEIVDGNTSLDFIEYVCKKKYGEMHA 184 Query: 191 FACESGAIMAHASQNEKERLRCFG 214 GAI+ A++ E ++LR FG Sbjct: 185 CGAACGAILGGAAEEEIQKLRNFG 208 >gi|208434187|ref|YP_002265853.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori G27] gi|208432116|gb|ACI26987.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori G27] Length = 307 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D IRR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATIRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + I S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIA-QILSNAVLRLSRG------------EIEDVFVGESFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLNFGMAFQIIDDLLDITQD 208 >gi|46015925|pdb|1V4K|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima S77f Mutant Length = 299 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H L+HDD+ +D RRGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLAFLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N +L + + IG M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|239918588|ref|YP_002958146.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] gi|281415197|ref|ZP_06246939.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] gi|239839795|gb|ACS31592.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] Length = 358 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 29/217 (13%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL------RVGAAIECIHCYSLIHDDL 92 LL ++ + GK IR LV L + + R+GAA E +H L+HDD+ Sbjct: 39 LLDSLHVHVGAGKLIRPRLVELGWRLATADPVPPSGRAAVDRLGAAFELLHTALLVHDDV 98 Query: 93 PSMDNGYIRRGKPTVHIQYDE-----------------VTAIIAGNGLLTYAFEIISSPK 135 +D +RRG+P VH A+IAG+ LLT AF + ++ Sbjct: 99 --IDRDVLRRGQPAVHASARHRLEARGVPAADAAHAGVAVALIAGDVLLTQAFRLAATCA 156 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFA 192 + ++ + G L +L + E D ++ +Q++KT A Sbjct: 157 ADTARAAEAAAVVFDAAAVTAAGELEDVLLGLSRHTGEEPDPDRILAMQRLKTAHYTVGA 216 Query: 193 -CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +GA++A A + + G +LG +Q+ DD+L Sbjct: 217 PLRAGALLAGADPDLARAMGEAGADLGAAYQVIDDVL 253 >gi|256825427|ref|YP_003149387.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM 20547] gi|256688820|gb|ACV06622.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM 20547] Length = 362 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 41/223 (18%) Query: 37 DRLLSAIRYALLGGKKIRSFLVT--ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 D L AI + GGK++R +T A+ + + T L+ A+E +L+HDD+ Sbjct: 37 DELAQAIESLMQGGKRLRPGFLTWGHVAAGGSADEAT-LQAATAMEFFQAAALLHDDV-- 93 Query: 95 MDNGYIRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISSPKTQL 138 MD+ RRG P H + + AI+AG+ L +A + + Sbjct: 94 MDDSDTRRGTPAAHRVWAQRHREHAFEGSPEDHGIAGAILAGDLCLVWADAAFTGCGWEP 153 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-----EFID----ETQVFMIQKMKTGALM 189 + +R++ T N+ ++ GQ LDI + E +D +V + + K+ Sbjct: 154 EQMLRARP----TWNLMRTQLMAGQFLDILNAARPWETLDTDARHERVRRVMQYKSAK-- 207 Query: 190 CFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 ++ E GA A ++ L +G +LG+ FQL DD+L Sbjct: 208 -YSIEHPLLIGADAAGVDPTTRQHLSDYGLHLGLAFQLRDDVL 249 >gi|254819742|ref|ZP_05224743.1| polyprenyl synthetase [Mycobacterium intracellulare ATCC 13950] Length = 349 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 44/175 (25%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTY 126 H +L+HDD+ +D+ RRG+PT H+Q+ + AI+ G+ L + Sbjct: 77 HACALVHDDV--IDDSSTRRGRPTTHVQFATLHRDRGWQGSPERFGASAAILLGDLALAW 134 Query: 127 AFEIIS----SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 A +I+ +P+ Q + NIR++ +LGGQ LDI E + Sbjct: 135 ADDIVFGIDLTPQAQRRIRRVWANIRTE-------------VLGGQYLDIVAEASAAASI 181 Query: 178 FMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + T C+ G A + + FG +LG+ FQL DD+L Sbjct: 182 ASAMNVDTFKTACYTVSRPLQLGVAAAADRPDVHDIFSQFGTDLGVAFQLRDDVL 236 >gi|153799383|gb|ABS50454.1| NapT7 [Streptomyces aculeolatus] Length = 357 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 41/207 (19%) Query: 49 GGKKIR-SFLVT-ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R +F +T A+ + + A +E +H +LIHDD+ +DN RRGKPT Sbjct: 66 GGKRVRPTFCITGYLAAGGDAGDPGIVAAAAGLEMLHVSALIHDDI--LDNSAQRRGKPT 123 Query: 107 VHIQY----------------DEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLS 149 +H Y E I+ GN L Y+ E++ +P L + R L Sbjct: 124 IHTLYGDLHDSHGWRGESRRFGEGIGILIGNLALVYSQELVCQAPPAVLAEWHR----LC 179 Query: 150 LTHNIGLQGMLGGQMLDI--QDEFIDETQVF-MIQKMKTGALMCFACESGAIMAHASQNE 206 NI GQ LD+ EF + ++ ++ +K+G + +M + + Sbjct: 180 SEVNI-------GQCLDVCAAAEFSADPELSRLVALIKSGR---YTIHRPLVMGANAASR 229 Query: 207 KERLRC---FGENLGIIFQLADDLLDC 230 + +GE +G FQL DDLLD Sbjct: 230 PDLAAAYVEYGEAVGEAFQLRDDLLDA 256 >gi|237749809|ref|ZP_04580289.1| octaprenyl-diphosphate synthase [Helicobacter bilis ATCC 43879] gi|229374559|gb|EEO24950.1| octaprenyl-diphosphate synthase [Helicobacter bilis ATCC 43879] Length = 421 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 8/91 (8%) Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 L GK +RS LV L V+ A R+ A IE I SL+HDD+ +D+ +RRGKP+ Sbjct: 29 LESGKMLRSKLV-----LSVVDSDEAYRLCAVIELIQSASLLHDDV--IDSSDLRRGKPS 81 Query: 107 VHIQYDEVTAIIAGNGLLTYA-FEIISSPKT 136 ++ Q+ AI+ G+ L + A FE+ PK+ Sbjct: 82 LNAQFGNKNAIMLGDILYSRAFFELSHFPKS 112 >gi|257790345|ref|YP_003180951.1| Polyprenyl synthetase [Eggerthella lenta DSM 2243] gi|317489792|ref|ZP_07948291.1| polyprenyl synthetase [Eggerthella sp. 1_3_56FAA] gi|257474242|gb|ACV54562.1| Polyprenyl synthetase [Eggerthella lenta DSM 2243] gi|316911138|gb|EFV32748.1| polyprenyl synthetase [Eggerthella sp. 1_3_56FAA] Length = 349 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 11/191 (5%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y+ GGK+ R + + A AAIE H +LIHDD+ D +RRG+ Sbjct: 56 YSQNGGKRHRPLICFAACRAVGGDMARATSAAAAIEHFHTAALIHDDIA--DEAELRRGE 113 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 P +H+ AI AG+ L+ + S + L D + +++ L + + GQ Sbjct: 114 PCMHLTEGMGLAINAGDLALSLVNGTVVSDE-NLDDATKVRVITELIDMT--RRTIEGQA 170 Query: 165 LDI---QDEFIDET-QVFMIQKMKTGALMCFACE--SGAIMAHASQNEKERLRCFGENLG 218 LDI +D D T + +++ A A GAI+ ++ E E LR +G + G Sbjct: 171 LDIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAIIGGGTEVEVEALRNYGLDTG 230 Query: 219 IIFQLADDLLD 229 + FQ+ DDLL+ Sbjct: 231 LAFQIQDDLLN 241 >gi|317008891|gb|ADU79471.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori India7] Length = 307 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + I S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGEAIA-QILSNAVLRLSRG------------EIEDVFVGESFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 M + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFMEASLKSMAILL----NKDTKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|313885281|ref|ZP_07819032.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8] gi|312619387|gb|EFR30825.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8] Length = 321 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 77/185 (41%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 GK R+ LV A L N T L + A IE H +LIHDD+ +D RRG Sbjct: 45 SGKFARAGLVLMFARL---NQKTISQEKLNIAAGIELFHLATLIHDDV--IDEADQRRGI 99 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 H+ AI AG+ LL YA + I + T + L G L Q+ Sbjct: 100 QAFHLAESNRIAIYAGDYLLAYAMRFLYQSGLNDFSGIEQK-----TIELILNGELN-QL 153 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ D + + K KT L A G S+ + ++ GE +G+ FQL Sbjct: 154 KNVADPTMTIYRYLRQIKGKTALLFGLATVGGYQTESISRRQLKQAYYAGEEIGMAFQLI 213 Query: 225 DDLLD 229 DD LD Sbjct: 214 DDQLD 218 >gi|284050730|ref|ZP_06380940.1| trans-hexaprenyltranstransferase [Arthrospira platensis str. Paraca] Length = 211 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 8/148 (5%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D +RRG PTVH ++ A++AG+ L + +++ Sbjct: 72 RLAEITEMIHTASLVHDDV--VDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWYLAN 129 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + SQ+++ L QG L+ D + KT +L+ + Sbjct: 130 LDNLEVVKLLSQVIMDLAEGEIQQG------LNRFDTSLSIEAYLEKSYYKTASLIANSS 183 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIF 221 ++ +++ S E L +G N+G+ F Sbjct: 184 KAAGLLSGVSAELAEDLYKYGRNIGLAF 211 >gi|122890375|emb|CAL34101.1| putative trans-polyprenyl diphosphate synthetase [Streptomyces cinnamonensis] Length = 352 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 43/239 (17%) Query: 24 LLQTASHMQTQHNDRLLSAIRY----ALLGGKKIRSF--LVTECASLFNVNHLTALRVGA 77 L+ + + N+R + A+ GGK+IR + A+ + + + A Sbjct: 32 FLRAEHELWAEVNERAVGAVAALTDLVAAGGKRIRPAFCIAGYLAAGGDPDDTAVVAAAA 91 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGN 121 A+E +H +LIHDD+ +D RRG+PTVH +Y E AI+ G+ Sbjct: 92 ALEMLHASALIHDDV--IDASSHRRGRPTVHARHSALHDRNAWQGESRRYGEGVAILVGD 149 Query: 122 GLLTYAFEII-SSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEF-IDET 175 L Y+ +++ ++P L +RS+LM+ GQ +D+ EF +D Sbjct: 150 LALVYSEQLMAAAPPAVLPVWGTLRSELMI-------------GQYMDMTAAAEFLVDPR 196 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 I K+G A + +GE +G FQL DDLLD D Sbjct: 197 LSRWIALAKSGHYTIHRPLVVGASAAGRADLAPAFAKYGEAVGEAFQLRDDLLDAFGDF 255 >gi|15594659|ref|NP_212448.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi B31] gi|2688215|gb|AAC66696.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi B31] Length = 347 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%) Query: 42 AIRYALLGGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 AI GGK+IR ++ A L N ++ +E H SLI DD+ DN Sbjct: 50 AIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 RRG +H+ Y +I AGN L Y K+ LK+N +L++ L Sbjct: 108 LKRRGASAIHLIYGIDNSINAGN--LIYFLPAKLIEKSNLKEN--QKLLIYENFFTTLSN 163 Query: 159 MLGGQMLDIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ +DI+ + +I + ++ + ++KT +L A AI+ + K+ F Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223 Query: 215 ENLGIIFQLADDLLDCEEDL 234 + LG+ FQ+ DD+ + + + Sbjct: 224 K-LGVYFQIIDDIKNIKNKI 242 >gi|320333936|ref|YP_004170647.1| Geranyltranstransferase [Deinococcus maricopensis DSM 21211] gi|319755225|gb|ADV66982.1| Geranyltranstransferase [Deinococcus maricopensis DSM 21211] Length = 329 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 38/207 (18%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGY 99 Y GGK IR+ L+ A V T AL + A +E + LIHDD+ D+ Sbjct: 32 YPARGGKGIRAELLLASARAHGVREGTPAWEQALWLAATVELFQNWVLIHDDI--EDDSE 89 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--MLSLTH----- 152 RRG+P +H + A+ AG+ L Y + ++ + N+ +L + H Sbjct: 90 ERRGQPALHRTHGVPLALNAGDALHAYMWAAVA------RANVPGAFEEVLQMIHRTAEG 143 Query: 153 -NIGLQGMLGGQMLDIQDEFID----ETQVF-MIQKMKTGALMCFACESGAIMAHASQNE 206 ++ L + G+ +++D +T + ++ ++ GAL A S A A Sbjct: 144 QHVDLAWVEHGRWDLTPADYLDMVRLKTAYYTVVVPLRLGALAAGATPSAAFEA------ 197 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 G LG FQ+ DD+L+ D Sbjct: 198 ------AGVALGAAFQIRDDVLNLTAD 218 >gi|117164792|emb|CAJ88341.1| putative polyprenyl synthetase [Streptomyces ambofaciens ATCC 23877] Length = 357 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 23/201 (11%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104 +L GGK++R L+ E A L + L A +IE + + L+HDDL +D+ RRG Sbjct: 51 SLRGGKRMRVVLLHEAARLVRDEPVDGLDAAALSIELLQTHGLVHDDL--IDDSATRRGG 108 Query: 105 PTVHIQYDEV----------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 PT + Y E ++AG+ L + ++ +L +R Q M+ + Sbjct: 109 PTTYHAYRERFPRHPQAALGLTVLAGDLALALSLRVLLD--AELPVEVR-QAMVEVQTRA 165 Query: 155 GLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KE 208 +G Q+ D++ +F D+ + + K+ A ++A Q +E Sbjct: 166 ATDTFVG-QIADLERDFAPAVPDDDVLHDVADHKSARYSVLAPLYLGLLAAGEQPAAFEE 224 Query: 209 RLRCFGENLGIIFQLADDLLD 229 LR + +GI Q+ DD LD Sbjct: 225 ELRRYARLVGICGQMRDDYLD 245 >gi|319443462|pdb|3AQ0|A Chain A, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443463|pdb|3AQ0|B Chain B, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443464|pdb|3AQ0|C Chain C, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443465|pdb|3AQ0|D Chain D, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443466|pdb|3AQ0|E Chain E, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443467|pdb|3AQ0|F Chain F, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443468|pdb|3AQ0|G Chain G, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) gi|319443469|pdb|3AQ0|H Chain H, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase (Surface Polar Residue Mutant) Length = 348 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 14/153 (9%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG ++++ +++AG+ LL+ A +++ K Sbjct: 97 EMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT-- 152 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196 + + L ++ H ++ G+ ++I + + +QK KT +L+ +C++ Sbjct: 153 -EVVALLATAVEH------LVTGETMEITSSTAARYSMDYYMQKTYYKTASLISNSCKAV 205 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ + +G NLG+ FQL DD+LD Sbjct: 206 AVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 238 >gi|76800954|ref|YP_325962.1| multifunctional long-chain (E)-prenyl diphosphate synthase [Natronomonas pharaonis DSM 2160] gi|76556819|emb|CAI48393.1| probable multifunctional long-chain (E)-prenyl diphosphate synthase [Natronomonas pharaonis DSM 2160] Length = 291 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 24/199 (12%) Query: 46 ALLGGKKIR---SFLVTECASLFNVNH--------LTALRVGAAIECIHCYSLIHDDLPS 94 +L GGK++R + L E A V A+ IE +H SL+ DD+ Sbjct: 35 SLSGGKRVRPMVALLAFEAAGGELVGEDGRGSEPSRNAIDFAVGIELVHNASLVVDDI-- 92 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +D +RRG + + AI +GLL AF + S+ ++ ++ M+ L Sbjct: 93 IDESELRRGVDSAWAAFGYGPAITTSDGLLGEAFSLFSADPRAMR--TVAEAMVELGE-- 148 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 G+ ++ + E + + KTGAL A E GAI A A + + Sbjct: 149 -------GEATELVERPDSEAAYMELARRKTGALFRAAAELGAIAADADTYAVDAFGQYA 201 Query: 215 ENLGIIFQLADDLLDCEED 233 E +GI FQ+ DD+LD D Sbjct: 202 ERVGIAFQIRDDVLDATAD 220 >gi|302336334|ref|YP_003801541.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Olsenella uli DSM 7084] gi|301320174|gb|ADK68661.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Olsenella uli DSM 7084] Length = 355 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 11/192 (5%) Query: 44 RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 R+ GGK+ R LV + AL A IE +LIHDD+ D G +RRG Sbjct: 59 RFVASGGKRTRPALVLLGCEAVGGDVERALSSAAGIEHFQSAALIHDDI--ADEGELRRG 116 Query: 104 KPTVHIQYDEVTAIIAGN-GLLTYAFEIISS----PKTQLKDNIRSQLMLSLTHNIGLQG 158 +P ++ AI G+ G++ +++ P T+L+ + ++L + Q Sbjct: 117 EPCTYLTEGLGVAINTGDLGIVRTFADVLEDDALDPTTKLR--VLAELAQMEQRTVEGQA 174 Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES-GAIMAHASQNEKERLRCFGENL 217 + G + D + + + + + + KT + S GAI S + L FG + Sbjct: 175 LDLGWVRDGRWD-VSTSDYLRMARHKTAFYSASSPLSIGAICGGGSSGQVGALGSFGMDA 233 Query: 218 GIIFQLADDLLD 229 G+ FQL DDLL+ Sbjct: 234 GLAFQLQDDLLN 245 >gi|302786728|ref|XP_002975135.1| geranyl diphosphate synthase [Selaginella moellendorffii] gi|300157294|gb|EFJ23920.1| geranyl diphosphate synthase [Selaginella moellendorffii] Length = 342 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 8/150 (5%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG +++ A++AG+ LL A +S+ + Sbjct: 75 EMIHVASLLHDDV--LDHADTRRGIASLNFIMGNKLAVLAGDFLLARAAFSLSTLQNDEV 132 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + S+++ L +Q + + D ++ +T KT +L+ +C+ AI+ Sbjct: 133 VGLMSKVLEHLVAGEVMQWTVDAEKSSSMDYYLQKTF------YKTASLIANSCKCIAIL 186 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + +G +LG+ +QL DDLLD Sbjct: 187 AGHPKEVAALAFDYGRHLGLAYQLVDDLLD 216 >gi|229816079|ref|ZP_04446400.1| hypothetical protein COLINT_03135 [Collinsella intestinalis DSM 13280] gi|229808393|gb|EEP44174.1| hypothetical protein COLINT_03135 [Collinsella intestinalis DSM 13280] Length = 355 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 7/202 (3%) Query: 33 TQHNDRLLSA--IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 T+ DR L A + GGK++R L A AL G AIE +LIHD Sbjct: 42 TEDLDRYLYAPLAHFTAGGGKRVRPVLALLGAEAVGGCADQALSCGVAIELFQSAALIHD 101 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLM 147 D+ D +RRG+P ++ AI AG+ LT FEI+ S + + + +L+ Sbjct: 102 DIA--DASELRRGEPCLYRTEGLGLAINAGDLALTRVFEIVLADGSLPAERRVRVLEELV 159 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 H + Q + G D + + + ++MI + +GA+ A A + Sbjct: 160 RMERHTLEGQALDLGWARDGRWDVTSDDYLYMIDGKTAWYTVASPLYAGALAAGAEPDAV 219 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 L G G+ FQL DDLL+ Sbjct: 220 RGLIEVGLPAGLAFQLQDDLLN 241 >gi|254384667|ref|ZP_05000006.1| polyprenyl synthetase [Streptomyces sp. Mg1] gi|194343551|gb|EDX24517.1| polyprenyl synthetase [Streptomyces sp. Mg1] Length = 357 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 11/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E H ++L+HDD+ +D RRG+ T + AII G+ +L A +++ Sbjct: 105 ELAHNFTLLHDDV--IDKDVRRRGRATAWTVFGTPDAIITGDAMLALALRLLAQDGHPAS 162 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESG 196 ++L + + GQ D Q + + + KTGAL+ AC G Sbjct: 163 AAASARLATCIIE------LCAGQQADCAFEQRPDVSLDECLTMAMAKTGALLGCACALG 216 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A+ A A +E + + FG G+ FQL DDL+ Sbjct: 217 ALYAGAGPDEVDAMDAFGREAGLAFQLIDDLI 248 >gi|302791545|ref|XP_002977539.1| hypothetical protein SELMODRAFT_271252 [Selaginella moellendorffii] gi|300154909|gb|EFJ21543.1| hypothetical protein SELMODRAFT_271252 [Selaginella moellendorffii] Length = 402 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 8/150 (5%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG +++ A++AG+ LL A +S+ + Sbjct: 151 EMIHVASLLHDDV--LDHADTRRGIASLNFIMGNKLAVLAGDFLLARAAFSLSTLQNDEV 208 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + S+++ L +Q + + D ++ +T KT +L+ +C+ AI+ Sbjct: 209 VGLMSKVLEHLVAGEVMQWTVDAEKSSSMDYYLQKTF------YKTASLIANSCKCIAIL 262 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + +G +LG+ +QL DDLLD Sbjct: 263 AGHPKEVAALAFDYGRHLGLAYQLVDDLLD 292 >gi|45190485|ref|NP_984739.1| AEL122Wp [Ashbya gossypii ATCC 10895] gi|44983427|gb|AAS52563.1| AEL122Wp [Ashbya gossypii ATCC 10895] Length = 351 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 33/218 (15%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTE-------CASLFNVNHLTALRV---GAAIECIHCYS 86 D ++ Y GGK R V + C S ++ RV G +E + Y Sbjct: 36 DWYEKSLNYNTPGGKLNRGLSVVDTYVILKNCKSPLDLPVDEYRRVALLGWCVELLQAYF 95 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+ DD+ MD RRG+P + + +EV G+ + AF + ++ LK N R Q Sbjct: 96 LVADDM--MDKSITRRGQPCWY-RVEEV-----GDMAINDAFMLEAAIYCLLKRNFRDQP 147 Query: 147 ----MLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQK------MKTGALMCFACE 194 +L L H++ Q +G Q+LD+ EFI + F +Q+ KT + Sbjct: 148 YYVDLLELLHDVTFQTEVG-QLLDLMTAPEFIVDLNKFSLQRHSYIVIFKTAYYSFYLPV 206 Query: 195 SGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230 + A+ A +E++ + R LG FQ+ DD LDC Sbjct: 207 ALAMYAAGVNDERDFAQAREVLLPLGEYFQIQDDYLDC 244 >gi|302688755|ref|XP_003034057.1| hypothetical protein SCHCODRAFT_15088 [Schizophyllum commune H4-8] gi|300107752|gb|EFI99154.1| hypothetical protein SCHCODRAFT_15088 [Schizophyllum commune H4-8] Length = 320 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 18/223 (8%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 R D IL L + S ++ +L Y L GK+ R+ L+ V T Sbjct: 3 RYDNILARL--SSESRWTPENEKAVLEPYEYLLSTPGKEFRTQLIDAFNKWLAVPGDTLQ 60 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE---I 130 + + +H SL+ DD+ D+ +RRGKP H Y I GN + A+ + Sbjct: 61 IIAKIVNMLHSASLMVDDIE--DDSQLRRGKPVTHKIYGVPQTINTGNYVYFLAYRELLL 118 Query: 131 ISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTGAL 188 + P + + + + +LSL GL+ + + +DE+ID M+ KTG L Sbjct: 119 LREPAKGIDVEKLVTDELLSLHRGQGLELLWRDSLQCPTEDEYID-----MVNN-KTGGL 172 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + +MA ++QN +G+ FQ+ DDL++ + Sbjct: 173 LRIGIR--LMMACSTQNRDMNYIPLVNLIGVFFQIRDDLMNLQ 213 >gi|134101716|ref|YP_001107377.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] gi|291003113|ref|ZP_06561086.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] gi|133914339|emb|CAM04452.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea NRRL 2338] Length = 368 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 47/256 (18%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 ++ L + L E +R D ++ D ++ TQ ++R L GGK+IR Sbjct: 21 VDAALGNFLDEQEERFDDLISDPQSRSQWRAATQ-------SLRGFLAGGKRIRPAFCYW 73 Query: 61 CASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---- 114 +GAA +E +H ++L+HDD+ +D RRG P++H Q+ E+ Sbjct: 74 GWRGAGGGADDEGVIGAAAALELLHSFALVHDDI--IDASDTRRGAPSLHRQHAELHRRS 131 Query: 115 ------------TAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGM 159 A++ G+ L + +++++ P ++++ R + SLT + Sbjct: 132 GGRGSSELFGTSIALLLGDLCLAWFHDMLATSGLPAERIRE-ARPLVAHSLTE------L 184 Query: 160 LGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACES----GAIMAHASQNEKERLRC 212 + GQ LD+ ++ V + + KT + E G ++A AS Sbjct: 185 VLGQYLDVAEQACSRHSVSRSYTVIHYKTAK---YTIERPLHLGGVLAGASPALLGSYTA 241 Query: 213 FGENLGIIFQLADDLL 228 + LG FQL DD+L Sbjct: 242 YAMPLGEAFQLRDDVL 257 >gi|325676958|ref|ZP_08156630.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707] gi|325552258|gb|EGD21948.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707] Length = 389 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 39/213 (18%) Query: 45 YALLGGKKIRSFLVT-----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + L GGK++R V ALR +A+E + +L+HDD+ +D Sbjct: 74 FVLRGGKRVRPMFVWTGWLGAGGDATGPEAPAALRAASALELVQACALVHDDI--IDAST 131 Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIIS----SPKTQLK 139 RRG PTVH+++ + AI+ G+ L +A ++I SP Q + Sbjct: 132 TRRGFPTVHVEFADQHSAHHWSGGSAEFGRAVAILLGDLALAWADDMIREAGLSPDAQAR 191 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DET--QVFMIQKMKTGALMC-FACES 195 +S + +LGGQ LDI E DET + + KT A Sbjct: 192 --------ISPVWSAMRTEVLGGQFLDISSEVRGDETVEAALRVDRYKTAAYTIERPLHL 243 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A R FG ++GI FQL DDLL Sbjct: 244 GAALAGADDALVAAYRTFGTDIGIAFQLRDDLL 276 >gi|225552210|ref|ZP_03773150.1| octaprenyl-diphosphate synthase [Borrelia sp. SV1] gi|225371208|gb|EEH00638.1| octaprenyl-diphosphate synthase [Borrelia sp. SV1] Length = 347 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%) Query: 42 AIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 AI GGK+IR L+ L N ++ +E H SLI DD+ DN Sbjct: 50 AIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 RRG+ +H+ Y +I AGN L Y ++ LK+N +L++ L Sbjct: 108 LKRRGESAIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTLSN 163 Query: 159 MLGGQMLDIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ +DI+ + +I + ++ + ++KT +L A AI+ + K+ F Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223 Query: 215 ENLGIIFQLADDLLDCEEDL 234 + LG+ FQ+ DD+ + + + Sbjct: 224 K-LGVYFQIIDDIKNIKNKI 242 >gi|145616288|ref|XP_360889.2| hypothetical protein MGG_03432 [Magnaporthe oryzae 70-15] gi|145010025|gb|EDJ94681.1| hypothetical protein MGG_03432 [Magnaporthe oryzae 70-15] Length = 711 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 34/204 (16%) Query: 41 SAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + IRY + K RS LV + +V + + I C+H SLI DD+ DN Sbjct: 415 APIRYIQSMPSKGFRSALVDCYSRWLDVPAREMESIKSVINCLHDSSLILDDIE--DNSR 472 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRG P H+ Y AI + L A I+S DN ++M L LQ + Sbjct: 473 LRRGFPATHVVYGAGPAINSATYLYVQAVAAINS-----LDN--REMMDVLLRQ--LQNL 523 Query: 160 LGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 GQ LD+ +DE++ M+ + KTGA + E ++A ++ N E+ Sbjct: 524 FLGQSLDLHWTANRQCPTRDEYLG-----MVGQ-KTGAFISMVAE--LMIAASNVNSPEK 575 Query: 210 LR----CFGENLGIIFQLADDLLD 229 R F G+ +Q+ DD L+ Sbjct: 576 TRAAFAAFSHLSGLYYQVRDDYLN 599 >gi|271969419|ref|YP_003343615.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM 43021] gi|270512594|gb|ACZ90872.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM 43021] Length = 326 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 31/161 (19%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA----FEIIS 132 A +E IH SL+HDDL MD RRG T++ + + A++ G+ +L A ++S Sbjct: 80 ACVELIHAGSLVHDDL--MDKAAERRGVRTLNAELGDARALVVGDFMLARAGLAALSVVS 137 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGAL 188 P + ++ +L GQ ++ + F E + I KT AL Sbjct: 138 KPVARTLASVVVELA-------------EGQFQEVAELFDPGRTPEDALRSITG-KTAAL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +C ++AH + + +GE G++FQ+ DDLLD Sbjct: 184 FRASC----LVAHP---DGRSMAEYGERFGVLFQILDDLLD 217 >gi|257068597|ref|YP_003154852.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM 4810] gi|256559415|gb|ACU85262.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM 4810] Length = 377 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 48/193 (24%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAI 117 R G AIE + +L+HDD+ +D+ +RRG+P +H+Q Y AI Sbjct: 90 RYGTAIELVQAAALMHDDV--IDHSPVRRGRPALHVQAERRHRAEELAGSAEDYGVAVAI 147 Query: 118 IAGNGLLTYAFEIIS----SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + G+ L++A +I S SP D +R+++M GQ LDI Sbjct: 148 VLGDLALSWAEQIASGVEGSPGAVAAAHREFDALRTEVM-------------SGQFLDIL 194 Query: 169 DEF--------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + ++ + +I+ + GA + A E L + +G Sbjct: 195 HQAGGFSSAPDAEQAALSVIRWKTVPYTVLRPVRIGAALLGADHTALETLSAWAIEVGTA 254 Query: 221 FQLADDLLDCEED 233 FQL DDLL D Sbjct: 255 FQLRDDLLSVVGD 267 >gi|89074633|ref|ZP_01161098.1| Dimethylallyltransferase; Geranyltranstransferase [Photobacterium sp. SKA34] gi|89049571|gb|EAR55131.1| Dimethylallyltransferase; Geranyltranstransferase [Photobacterium sp. SKA34] Length = 298 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 11/196 (5%) Query: 40 LSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 LS +RY GG + R+ + A +N TA + +E +H SLIHDD+ D Sbjct: 39 LSYLRYHQQSGGSQRRAKICYITAVSLGLNTNTAKLLAVTVELLHNASLIHDDVQDKDRQ 98 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 RRG+ + ++ AI G+ L+ A+ +S T ++++ + + I Sbjct: 99 --RRGQDALWVKASVEEAICLGDTLIIAAYHALSKINTPANSHLQATVCRRVMETI---- 152 Query: 159 MLGGQMLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQM D+ + + E +I K L+ + E A++A K L + Sbjct: 153 --RGQMEDLSPQLPLTEQSYTLIATNKAAPLLSLSVELPALLAGEPSLAKA-LSNAASSF 209 Query: 218 GIIFQLADDLLDCEED 233 + +Q DDL D +D Sbjct: 210 ALAYQFYDDLCDQAQD 225 >gi|126136094|ref|XP_001384571.1| arnesyl diphosphate synthetase (FPP synthetase) [Scheffersomyces stipitis CBS 6054] gi|126091769|gb|ABN66542.1| arnesyl diphosphate synthetase (FPP synthetase) [Scheffersomyces stipitis CBS 6054] Length = 350 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 34/225 (15%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAAIE 80 +M + D + + Y GGK R V + + N L +G AIE Sbjct: 29 NMPQEAVDWFVKNLDYNTPGGKLNRGLSVVDTYCILNKTTAVELDDEKYAKVALLGWAIE 88 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 + Y L+ DD+ MD RRG+P ++ A GN + +F + + LK Sbjct: 89 LLQAYFLVADDM--MDQSKTRRGQPCWYL------AEGVGNIAINDSFMLEGAIYVLLKK 140 Query: 141 NIRSQL----MLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQK------MKTGAL 188 + R+ +L L H + + LG Q+LD+ DE++ + F + K KT A Sbjct: 141 HFRNDSYYVDLLDLFHEVTFKTELG-QLLDLVTADEYVVDLDKFSLDKHSFIVIFKT-AY 198 Query: 189 MCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDC 230 F M + N E L+ + LG FQ+ DD LDC Sbjct: 199 YSFYLPVALAMYMSGINSAEDLKQVQDILIPLGEYFQIQDDFLDC 243 >gi|94985718|ref|YP_605082.1| polyprenyl synthetase [Deinococcus geothermalis DSM 11300] gi|94555999|gb|ABF45913.1| Polyprenyl synthetase [Deinococcus geothermalis DSM 11300] Length = 329 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 81/214 (37%), Gaps = 46/214 (21%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGY 99 Y GGK IRS L+ A T AL + A +E + LIHDD+ D+ Sbjct: 32 YPERGGKGIRSELLLASARAHGALPSTSAWEGALWLAAGLELFQNWVLIHDDI--EDDSE 89 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRG+P +H Y AI G+ L M + H G+ G Sbjct: 90 ERRGRPALHRLYGVPVAINVGDALHAS--------------------MWAAVHRAGVPGG 129 Query: 160 L-----------GGQMLDI-----QDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHA 202 L GQ LD+ + + E + ++KT + GA+ A Sbjct: 130 LEEFLNMVWRTAEGQHLDLTWVQERSWNLGEADYLAMVRLKTALYTVVVPLRLGALAAGV 189 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + ER GE LG FQ+ DD+L+ D K Sbjct: 190 LPD--ERFTAAGEALGAAFQIRDDVLNLAGDPAK 221 >gi|82540178|ref|XP_724427.1| polyprenyl synthetase [Plasmodium yoelii yoelii str. 17XNL] gi|23479061|gb|EAA15992.1| Polyprenyl synthetase, putative [Plasmodium yoelii yoelii] Length = 540 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 23/164 (14%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA---FEI 130 ++ AA E IH SL+HDD+ +D RRG ++H +Y +I++G+ LL A F Sbjct: 269 KIIAASEIIHMGSLLHDDV--IDESEKRRGSLSLHKKYGNKVSILSGDFLLARACSVFAS 326 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-KTGALM 189 I P+ + S ++ SL LQ L ++ D + ++I+ KT +L Sbjct: 327 IGYPEICKR---FSYVIESLIKGEFLQTNLNYNNIE------DALKTYLIKSYHKTASLF 377 Query: 190 C--FACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLD 229 FAC I + QN+K CF G ++G+ FQL DD LD Sbjct: 378 SHLFAC----IAIISFQNDKITELCFNLGLHIGMAFQLYDDYLD 417 >gi|312140160|ref|YP_004007496.1| polyprenyl synthase [Rhodococcus equi 103S] gi|311889499|emb|CBH48816.1| putative polyprenyl synthase [Rhodococcus equi 103S] Length = 373 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 39/213 (18%) Query: 45 YALLGGKKIRSFLVT-----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 + L GGK++R V ALR +A+E + +L+HDD+ +D Sbjct: 58 FVLRGGKRVRPMFVWTGWLGAGGDATGPEAPAALRAASALELVQACALVHDDI--IDAST 115 Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIIS----SPKTQLK 139 RRG PTVH+++ + AI+ G+ L +A ++I SP Q + Sbjct: 116 TRRGFPTVHVEFADQHSAHHWSGGSAEFGRAVAILLGDLALAWADDMIREAGLSPDAQAR 175 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DET--QVFMIQKMKTGALMC-FACES 195 +S + +LGGQ LDI E DET + + KT A Sbjct: 176 --------ISPVWSAMRTEVLGGQFLDISSEVRGDETVEAALRVDRYKTAAYTIERPLHL 227 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A R FG ++GI FQL DDLL Sbjct: 228 GAALAGADDALVAAYRTFGTDIGIAFQLRDDLL 260 >gi|294628908|ref|ZP_06707468.1| farnesyltranstransferase [Streptomyces sp. e14] gi|292832241|gb|EFF90590.1| farnesyltranstransferase [Streptomyces sp. e14] Length = 291 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 6/107 (5%) Query: 6 PSKLQENSKR--IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT--EC 61 P+ ++R ID +L D L + + + L+ + ++GGK+IR L Sbjct: 26 PATPDTTAERQAIDDVLKDFLEKRRKNCEPSQMGGLIELLADFMVGGKRIRPILTMLGWQ 85 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 A T ++V A++E H ++LIHDD+ MD+ RRG+PT+H Sbjct: 86 AVTGEAAGDTVVQVAASLEMFHAFALIHDDI--MDDSDTRRGRPTIH 130 >gi|71041847|pdb|1WL2|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima R90a Mutant Length = 299 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RGK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLASLLHDDV--IDGARFARGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N +L + + IG M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|71041848|pdb|1WL3|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima R91a Mutant gi|71041849|pdb|1WL3|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima R91a Mutant Length = 299 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D R GK T++ Y + A+ AG+ +L AF + Sbjct: 68 AALELVHLASLLHDDV--IDGARFRAGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N +L + + IG M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|119026031|ref|YP_909876.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium adolescentis ATCC 15703] gi|154488796|ref|ZP_02029645.1| hypothetical protein BIFADO_02103 [Bifidobacterium adolescentis L2-32] gi|118765615|dbj|BAF39794.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium adolescentis ATCC 15703] gi|154082933|gb|EDN81978.1| hypothetical protein BIFADO_02103 [Bifidobacterium adolescentis L2-32] Length = 362 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 32/207 (15%) Query: 49 GGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L + F + L + AIE +L+HDD+ +D+ +RR Sbjct: 51 GGKRLRALLTLDAFRAFAPQDVAERDMDAVLDLACAIEVFQTGALVHDDI--IDDSDLRR 108 Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTH 152 GKP+ H T I+ G+ L T + +I + +L L++ Sbjct: 109 GKPSAHRALATDTHSDAIGHGLGIMLGDMLATASVDIANKAACRLGSGSSVVSAFLNMHR 168 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFA-CESGAIMAHASQ 204 + + GQ+LD+ E +D+ + + + KT + A E G + A + Sbjct: 169 EVEI-----GQVLDLAVELNTLDDPEELASASLNVFRWKTASYTTIAPLEFGMLAAGLAP 223 Query: 205 NEKERLR-CFGENLGIIFQLADDLLDC 230 + RL G LG+ FQLADDLLD Sbjct: 224 ADARRLALAIGLPLGLAFQLADDLLDV 250 >gi|168203177|gb|ACA21459.1| geranyl diphosphate synthase 3 [Picea abies] Length = 427 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 14/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG +++ A++AG+ LL+ A ++S Sbjct: 170 RIAEITEMIHVASLLHDDV--LDDADTRRGVGSLNFVMGNKLAVLAGDFLLSRASVALAS 227 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQK--MKTGALMC 190 LK+ +L+ + L+ ++ G+++ + + + + +QK KT +LM Sbjct: 228 ----LKNTEVVELLSKV-----LEHLVTGEIMQMTNTNEQRCSMEYYMQKTFYKTASLMA 278 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +C++ A++A +G NLG+ +QL DD+LD Sbjct: 279 NSCKAIALIAGQPAEVCMLAYDYGRNLGLAYQLLDDVLD 317 >gi|284051507|ref|ZP_06381717.1| polyprenyl synthetase [Arthrospira platensis str. Paraca] Length = 537 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 80/204 (39%), Gaps = 20/204 (9%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GGK +R + A AL AA+E H LIHDD+ D RRGK Sbjct: 218 YPFRGGKMLRPTMCISAARAMGGMGQVALSTAAALELYHNAFLIHDDI--EDGSESRRGK 275 Query: 105 PTVH--------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 T+H I + T ++A GLL I KT N+ ++ ++ Sbjct: 276 GTLHHNIGIPRAINVGDATNVLA-VGLLLENLSAIGVTKTL---NVLHEIEFMARQSVEG 331 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC---- 212 Q M + + D M K C G I+ ++S N ++ + Sbjct: 332 QAMELDWVAENTQNLSDRDYFKMCVKKTCWYSFMTPCRIGLIVGNSSANPQDLVEPLAGV 391 Query: 213 --FGENLGIIFQLADDLLDCEEDL 234 FG LGI FQ+ DDLL+ D+ Sbjct: 392 TRFGMILGIAFQIQDDLLNLVGDM 415 >gi|30686146|ref|NP_850234.1| geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative [Arabidopsis thaliana] gi|330253906|gb|AEC09000.1| geranyl diphosphate synthase 1 [Arabidopsis thaliana] Length = 321 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 34/215 (15%) Query: 38 RLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHLTAL------------RV---GAA- 78 +L SA Y + GK+ RS ++ A+ NV AL RV G A Sbjct: 8 KLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAE 67 Query: 79 -IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 E IH SL+HDD+ +D+ RRG ++++ +++AG+ LL+ A +++ K Sbjct: 68 ITEMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT 125 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACE 194 + + L ++ H ++ G+ ++I + + +QK KT +L+ +C+ Sbjct: 126 ---EVVALLATAVEH------LVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCK 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A++ + +G NLG+ FQL DD+LD Sbjct: 177 AVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 211 >gi|291569742|dbj|BAI92014.1| polyprenyl synthetase family protein [Arthrospira platensis NIES-39] Length = 537 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 80/204 (39%), Gaps = 20/204 (9%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GGK +R + A AL AA+E H LIHDD+ D RRGK Sbjct: 218 YPFRGGKMLRPTMCISAARAMGGMGQVALSTAAALELYHNAFLIHDDI--EDGSESRRGK 275 Query: 105 PTVH--------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 T+H I + T ++A GLL I KT N+ ++ ++ Sbjct: 276 GTLHHNIGIPRAINVGDATNVLA-VGLLLENLSAIGVTKTL---NVLHEIEFMARQSVEG 331 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC---- 212 Q M + + D M K C G I+ ++S N ++ + Sbjct: 332 QAMELDWVAENTQNLSDRDYFKMCVKKTCWYSFMTPCRIGLIVGNSSANPQDLVEPLAGV 391 Query: 213 --FGENLGIIFQLADDLLDCEEDL 234 FG LGI FQ+ DDLL+ D+ Sbjct: 392 TRFGMILGIAFQIQDDLLNLVGDM 415 >gi|46581581|ref|YP_012389.1| octaprenyl-diphosphate synthase [Desulfovibrio vulgaris str. Hildenborough] gi|46451004|gb|AAS97649.1| octaprenyl-diphosphate synthase [Desulfovibrio vulgaris str. Hildenborough] gi|311235224|gb|ADP88078.1| Polyprenyl synthetase [Desulfovibrio vulgaris RCH1] Length = 321 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 18/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + ++E +H +L+HDD+ +D+ +RRG H Sbjct: 41 GGKRLRPLLTLLVARALGYADDDIYPLACSVELLHSATLLHDDI--LDDADLRRGMAAAH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQ 163 + ++AG+ LL A I++ +L I ++ + T I ++G G+ Sbjct: 99 TVFGSTATVLAGDALLALANLIVARYGDPRLTACISEAIIRTATGEIVEIAHMRGTDHGR 158 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D +ID I KT ++ +CE GA+ A AS+ FG +LGI FQ+ Sbjct: 159 -----DTYID------IITGKTAWMLRASCELGALRAGASEEAVRAAAAFGLDLGIAFQI 207 Query: 224 ADDLLD 229 DD LD Sbjct: 208 VDDALD 213 >gi|70606778|ref|YP_255648.1| polyprenyl synthetase [Sulfolobus acidocaldarius DSM 639] gi|68567426|gb|AAY80355.1| polyprenyl synthetase [Sulfolobus acidocaldarius DSM 639] Length = 283 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 23/214 (10%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78 ++DD++ + S ++ +L +Y L GK+ R+ L +L A Sbjct: 13 LIDDVIQKYLSQIKDLD---MLEVSKYILKDGKRYRAVLNMFFTEALGGELSNSLDAALA 69 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE +H SL DD+ D RRGK + Y + N L+ A IIS Sbjct: 70 IEILHSSSLALDDIVDYDT--TRRGKLSAWALYTNRRVVFITNYLIPSALNIISRYG--- 124 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 ++ ++ L L +G I+D F T ++KT +L S A+ Sbjct: 125 ENALKVSLELWKDTAVGA----------IKDMFGPATSYLSTIELKTSSLFKL---STAL 171 Query: 199 MAHASQNEKER--LRCFGENLGIIFQLADDLLDC 230 A + EK+ L G+ LGI++QL DD +DC Sbjct: 172 AAFTADREKDLDLLLDMGKYLGIMYQLIDDYIDC 205 >gi|320583988|gb|EFW98200.1| Geranylgeranyl diphosphate synthase [Pichia angusta DL-1] Length = 316 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 22/217 (10%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLG---GKKIRSFLVTECASLFNVNHLTALRVGAAI 79 ++L S + N++ L+ + L GK +RS L+ + NV ++ A I Sbjct: 1 MVLVPLSPSWNKENEKTLTTPYHYLADQTQGKHLRSLLIKTFNLVLNVPAEKLEKIEAVI 60 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 + +H SL+ DD+ DN +RR +P H+ + I N + A +++ Sbjct: 61 DTLHLSSLLIDDIE--DNSKLRRSRPCSHMIFGVPQTINCANYMYFVAMRLLT------- 111 Query: 140 DNIRSQLMLSLTHNIGLQGMLG---GQMLDIQ----DEFIDETQVFMIQKMKTGALMCFA 192 D I ++ + N+ L M+ GQ LD+ +E E + + KTG L Sbjct: 112 DAIENEDKRLVAQNVFLDEMVNLHRGQGLDLHWRENNECPSEQEYVNMVMNKTGGLFRL- 170 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 S +M + ++L LG+I+Q+ DD L+ Sbjct: 171 --SAKLMNLLADQPCDKLITLSNMLGVIYQIKDDYLN 205 >gi|120601259|ref|YP_965659.1| trans-hexaprenyltranstransferase [Desulfovibrio vulgaris DP4] gi|120561488|gb|ABM27232.1| Trans-hexaprenyltranstransferase [Desulfovibrio vulgaris DP4] Length = 321 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 18/186 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + ++E +H +L+HDD+ +D+ +RRG H Sbjct: 41 GGKRLRPLLTLLVARALGYADDDIYPLACSVELLHSATLLHDDI--LDDADLRRGMAAAH 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQ 163 + ++AG+ LL A I++ +L I ++ + T I ++G G+ Sbjct: 99 TVFGSTATVLAGDALLALANLIVARYGDPRLTACISEAIIRTATGEIVEIAHMRGTDHGR 158 Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D +ID I KT ++ +CE GA+ A AS+ FG +LGI FQ+ Sbjct: 159 -----DTYID------IITGKTAWMLRASCELGALRAGASEEAVRAAAAFGLDLGIAFQI 207 Query: 224 ADDLLD 229 DD LD Sbjct: 208 VDDALD 213 >gi|79324330|ref|NP_001031483.1| geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative [Arabidopsis thaliana] gi|57222236|gb|AAW39025.1| At2g34630 [Arabidopsis thaliana] gi|330253907|gb|AEC09001.1| geranyl diphosphate synthase 1 [Arabidopsis thaliana] Length = 422 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 34/215 (15%) Query: 38 RLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHLTAL-----------------RVGA 77 +L SA Y + GK+ RS ++ A+ NV AL + Sbjct: 109 KLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAE 168 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 E IH SL+HDD+ +D+ RRG ++++ +++AG+ LL+ A +++ K Sbjct: 169 ITEMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT 226 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACE 194 + + L ++ H ++ G+ ++I + + +QK KT +L+ +C+ Sbjct: 227 ---EVVALLATAVEH------LVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCK 277 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A++ + +G NLG+ FQL DD+LD Sbjct: 278 AVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 312 >gi|109947883|ref|YP_665111.1| octaprenyl-diphosphate synthase [Helicobacter acinonychis str. Sheeba] gi|109715104|emb|CAK00112.1| octaprenyl-diphosphate synthase [Helicobacter acinonychis str. Sheeba] Length = 307 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + L I S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMEN-LIAQILSNAVLRLSRG------------EIEDVFVGESFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 M + +S AI+ N+ ++ FG N G+ FQ+ DDLLD ++ Sbjct: 164 AHFMEASLKSMAILL----NKDAKIYANFGLNFGMAFQIIDDLLDITQN 208 >gi|11467329|ref|NP_043186.1| prenyl transferase [Cyanophora paradoxa] gi|399307|sp|P31171|PREA_CYAPA RecName: Full=Prenyl transferase gi|336639|gb|AAA65472.1| prephytoene pyrophosphate dehydrogenase [Cyanophora paradoxa] gi|1016130|gb|AAA81217.1| prenyl transferase [Cyanophora paradoxa] Length = 323 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 14/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D +RRG PTVH + AI+AG+ L + ++ Sbjct: 72 RLAEITEIIHTASLVHDDI--LDESDVRRGIPTVHSDFGTKIAILAGDFLFAQSSWYLA- 128 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQK--MKTGALMC 190 N+ S ++ L + + G++ ++F +D T ++K KT +L+ Sbjct: 129 -------NLESLEVVKLISKV-ITDFAEGEIRRGLNQFKVDLTLEEYLEKSFYKTASLLA 180 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + ++ A+++H L +G +LG+ FQ+ DD+LD Sbjct: 181 ASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILD 219 >gi|289774146|ref|ZP_06533524.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24] gi|289704345|gb|EFD71774.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24] Length = 392 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 57/262 (21%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS---AIRYALL---GGKKIRSFLVT 59 P + + +D +L +L + H + D L + A R A L GGK++R+ Sbjct: 29 PVTATDAANAVDAVLRGVLDERLRHCRAV--DPLFARELADRLAALTARGGKRLRTAFA- 85 Query: 60 EC---ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------- 109 C A+ + + LR GAA+E + +L+HDD+ MD RRG P +H+ Sbjct: 86 HCGWRAAGGSGDATAVLRTGAALELLQACALVHDDV--MDGSVQRRGAPALHVDLARGHW 143 Query: 110 ---------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-- 158 + A++ G+ L +A D++ ++ L H L G Sbjct: 144 AAGMHGSSESFGTSAAVLTGDLALAWA------------DDLLTETALGTPHGPRLHGEW 191 Query: 159 ------MLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEK-- 207 M+ GQ D+ + + V I +K+ AL A A + Sbjct: 192 RAMRTEMVAGQYRDLHAQAARSSGVDEALAIATLKS-ALYTVARPLALGAVLAGAADGDA 250 Query: 208 -ERLRCFGENLGIIFQLADDLL 228 E LR G G+ FQL DDLL Sbjct: 251 LEALRAAGRCAGLAFQLRDDLL 272 >gi|29841005|gb|AAP06018.1| similar to NM_010282 geranylgeranyl diphosphate synthase 1; GGPP synthase in Mus musculus [Schistosoma japonicum] Length = 335 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 19/181 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IRS L+ V T + + I+ +H SLI DD+ D Y+RRGKP H Sbjct: 29 GKGIRSLLMAAFNYWLKVPESTLDVISSVIQMLHNASLIIDDIE--DGSYLRRGKPAAHC 86 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + ++I + N + A E +S + I ++ ML L GQ +DI Sbjct: 87 VFGTASSINSANYVYFLALEKLSVLRRPESVKIFTEQMLELHR---------GQGMDIYW 137 Query: 168 QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + F E++ + KTG L +M S+N+ + + + +G+ FQ+ D Sbjct: 138 RSSFKCPSESEYEAMVLCKTGGLFGLGVR---LMQLFSKNQTD-YKPLLDTIGLFFQIRD 193 Query: 226 D 226 D Sbjct: 194 D 194 >gi|20260214|gb|AAM13005.1| putative trans-prenyltransferase [Arabidopsis thaliana] Length = 423 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 34/215 (15%) Query: 38 RLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHLTAL-----------------RVGA 77 +L SA Y + GK+ RS ++ A+ NV AL + Sbjct: 110 KLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAE 169 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 E IH SL+HDD+ +D+ RRG ++++ +++AG+ LL+ A +++ K Sbjct: 170 ITEMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT 227 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACE 194 + + L ++ H ++ G+ ++I + + +QK KT +L+ +C+ Sbjct: 228 ---EVVALLATAVEH------LVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCK 278 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + A++ + +G NLG+ FQL DD+LD Sbjct: 279 AVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 313 >gi|219685642|ref|ZP_03540457.1| octaprenyl-diphosphate synthase [Borrelia garinii Far04] gi|219672830|gb|EED29854.1| octaprenyl-diphosphate synthase [Borrelia garinii Far04] Length = 347 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 14/202 (6%) Query: 40 LSAIRYALLGGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L AI GGK+IR ++ A L N ++ +E H SLI DD+ D Sbjct: 48 LPAIEIINRGGKRIRPMIMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIE--D 105 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRG +H+ Y +I AGN L Y ++ LK+N +L++ L Sbjct: 106 NSLKRRGGSAIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTL 161 Query: 157 QGMLGGQMLDIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 + GQ +DI+ + +I + ++ + ++KT +L A AI+ + K+ Sbjct: 162 SNLHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKIYST 221 Query: 213 FGENLGIIFQLADDLLDCEEDL 234 F + LG+ FQ+ DD+ + + + Sbjct: 222 FLK-LGVYFQIIDDIKNIKNKI 242 >gi|319443460|pdb|3APZ|A Chain A, Apo Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase gi|319443461|pdb|3APZ|B Chain B, Apo Form Of Arabidopsis MediumLONG-Chain Length Prenyl Pyrophosphate Synthase Length = 348 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 14/153 (9%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG ++++ +++AG+ LL+ A +++ K Sbjct: 97 EMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT-- 152 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196 + + L ++ H ++ G+ ++I + + +QK KT +L+ +C++ Sbjct: 153 -EVVALLATAVEH------LVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAV 205 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ + +G NLG+ FQL DD+LD Sbjct: 206 AVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 238 >gi|164605004|dbj|BAF98298.1| geranyl-diphosphate synthase [Hevea brasiliensis] Length = 330 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG +++ A++AG+ LL+ A ++S K Sbjct: 164 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVAVLAGDFLLSRACVALASLK---N 218 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + S L + H + + M QM ++ KT +L+ +C++ A++ Sbjct: 219 TEVVSLLATVVEHLVTGETM---QMTSTSEQRCSMDHYMQKTYYKTASLISDSCKAIALL 275 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + +G++LG+ FQL DD+LD Sbjct: 276 AGQTTEVAMLAFEYGKSLGLAFQLIDDVLD 305 >gi|94984603|ref|YP_603967.1| dimethylallyltransferase [Deinococcus geothermalis DSM 11300] gi|94554884|gb|ABF44798.1| Dimethylallyltransferase [Deinococcus geothermalis DSM 11300] Length = 575 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 44/202 (21%) Query: 49 GGKKIR---SFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK+ R +FL + L + T + IE +H SL+HDDL +D+ RRG Sbjct: 291 GGKRARPTVTFLAAQALGLDGQDPRWQTVTDLAVCIELLHSASLLHDDL--IDDADTRRG 348 Query: 104 KPTVHIQYDEVTAIIAGNGL----------------LTYAFEIISSPKTQLKDNIRSQLM 147 + ++ V ++++G+ + LT AF +S Q+ + Q Sbjct: 349 QQAAFRRFGNVVSVMSGDFMLARLLTLLAAMPQGPALTRAFGQTAS---QICEGEVLQFQ 405 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 ++ GL ++D I KT AL+ A S A++ +A + ++ Sbjct: 406 VAAYAEYGLA------------PYLD------IIHGKTAALIELAAFSPALLLNAPEAQR 447 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 L FG G+ FQ+ DDLLD Sbjct: 448 AALATFGREYGLAFQIQDDLLD 469 >gi|289706465|ref|ZP_06502819.1| polyprenyl synthetase [Micrococcus luteus SK58] gi|289556784|gb|EFD50121.1| polyprenyl synthetase [Micrococcus luteus SK58] Length = 358 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 29/217 (13%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL------RVGAAIECIHCYSLIHDDL 92 LL ++ + GK IR LV L + + R+GAA E +H L+HDD+ Sbjct: 39 LLDSLHVHVGAGKLIRPRLVELGWRLATADPVPPSGRAAVDRLGAAFELLHTALLVHDDV 98 Query: 93 PSMDNGYIRRGKPTVHIQYDE-----------------VTAIIAGNGLLTYAFEIISSPK 135 +D +RRG+P VH A+IAG+ LLT AF + ++ Sbjct: 99 --IDRDTLRRGQPAVHASARHRLEARGVPAADAAHAGVAVALIAGDVLLTQAFRLAATCA 156 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFA 192 + + ++ + G L +L + E D ++ +Q++KT A Sbjct: 157 ADIARAAEAAAVVFDAAAVTAAGELEDVLLGLSRHTGEEPDPDRILAMQRLKTAHYTVGA 216 Query: 193 -CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +GA++A A + G +LG +Q+ DD+L Sbjct: 217 PLRAGALLAGADPGLARAMGEAGADLGAAYQVIDDVL 253 >gi|254503516|ref|ZP_05115667.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] gi|222439587|gb|EEE46266.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] Length = 318 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A +F + + A++E +H +L+HDD+ +D +RRGK Sbjct: 37 GGKRLRPMLTLAFADMFGYQGSGHVILAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 94 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + I S+ + LQ LG + Sbjct: 95 KLWGNQASVLVGDYLLGQAFKMMVDTGSLEALRILSEASAIIAEGEVLQ--LGAS----K 148 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + + KT AL A E G +A + ++ R +G LG FQ+ DD L Sbjct: 149 NIETTEAEYLRVIEAKTAALFAAAAEVGPEIAGQNDVMRKAARTYGLELGYAFQMVDDAL 208 Query: 229 D 229 D Sbjct: 209 D 209 >gi|297196800|ref|ZP_06914197.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083] gi|197711617|gb|EDY55651.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083] Length = 713 Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 31/220 (14%) Query: 32 QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q + ++ L+ +R L G+ R + LF + + A E +H SLI D Sbjct: 380 QDRLHESLVQPVRMLLDAPGRAWRPYTALSVLCLFGADPEPYRPLAALTELLHTASLIID 439 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII------SSPKTQLKDNIRS 144 D+ D +RRG+ TVH AI AG +AFE + P T L+ Sbjct: 440 DI--QDGSPLRRGRATVHEVIGTPAAITAGTAAF-FAFEPLLQRIPQHDPATMLR---VY 493 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQ------DEFI---DETQVF----MIQKMKTGALMCF 191 QL L L+ GQ LD+ D + D Q+ ++K+G + Sbjct: 494 QLCLR-----ALRAGHAGQALDLSSHQAAFDHAVTTGDNRQLLADIRTTHRLKSGVPVRC 548 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 E A++A A + + + + E +GI++Q++DD+ D + Sbjct: 549 IAEVAAVLADADEAQIRAVGDYFETVGIVYQISDDVADLD 588 >gi|224532172|ref|ZP_03672804.1| octaprenyl-diphosphate synthase [Borrelia valaisiana VS116] gi|224511637|gb|EEF82043.1| octaprenyl-diphosphate synthase [Borrelia valaisiana VS116] Length = 347 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 14/193 (7%) Query: 49 GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L+ L N ++ +E H SLI DD+ DN RRG Sbjct: 57 GGKRIRPMIMILLAYALGLKEKNDKLIYKLSLLLELPHSGSLIIDDIE--DNSLKRRGTS 114 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 +H+ Y +I AGN L Y ++ LK+N +L++ L + GQ + Sbjct: 115 AIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTLSNLHLGQGI 170 Query: 166 DIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 DI+ + +I + ++ + ++KT +L A AI+ + K+ F + LG+ F Sbjct: 171 DIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFLK-LGVYF 229 Query: 222 QLADDLLDCEEDL 234 Q+ DD+ + + + Sbjct: 230 QIIDDIKNIKNKI 242 >gi|21218742|ref|NP_624521.1| geranylgeranyl pyrophosphate synthase [Streptomyces coelicolor A3(2)] gi|5748647|emb|CAB53152.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces coelicolor A3(2)] Length = 392 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 57/262 (21%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS---AIRYALL---GGKKIRSFLVT 59 P + + +D +L +L + H + D L + A R A L GGK++R+ Sbjct: 29 PVTATDAANAVDAVLRGVLDERLRHCRAV--DPLFARELADRLAALTARGGKRLRTAFA- 85 Query: 60 EC---ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------- 109 C A+ + + LR GAA+E + +L+HDD+ MD RRG P +H+ Sbjct: 86 HCGWRAAGGSGDATAVLRTGAALELLQACALVHDDV--MDGSVQRRGAPALHVDLARGHW 143 Query: 110 ---------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-- 158 + A++ G+ L +A D++ ++ L H L G Sbjct: 144 AAGMHGSSESFGTSAAVLTGDLALAWA------------DDLLTETALGTPHGPRLHGEW 191 Query: 159 ------MLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEK-- 207 M+ GQ D+ + + V I +K+ AL A A + Sbjct: 192 RAMRTEMVAGQYRDLHAQAARSSGVDEALAIATLKS-ALYTVARPLALGAVLAGAADGDA 250 Query: 208 -ERLRCFGENLGIIFQLADDLL 228 E LR G G+ FQL DDLL Sbjct: 251 LEALRAAGRCAGLAFQLRDDLL 272 >gi|256790271|ref|ZP_05528702.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24] Length = 375 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 57/262 (21%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS---AIRYALL---GGKKIRSFLVT 59 P + + +D +L +L + H + D L + A R A L GGK++R+ Sbjct: 12 PVTATDAANAVDAVLRGVLDERLRHCRAV--DPLFARELADRLAALTARGGKRLRTAFA- 68 Query: 60 EC---ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------- 109 C A+ + + LR GAA+E + +L+HDD+ MD RRG P +H+ Sbjct: 69 HCGWRAAGGSGDATAVLRTGAALELLQACALVHDDV--MDGSVQRRGAPALHVDLARGHW 126 Query: 110 ---------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-- 158 + A++ G+ L +A D++ ++ L H L G Sbjct: 127 AAGMHGSSESFGTSAAVLTGDLALAWA------------DDLLTETALGTPHGPRLHGEW 174 Query: 159 ------MLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEK-- 207 M+ GQ D+ + + V I +K+ AL A A + Sbjct: 175 RAMRTEMVAGQYRDLHAQAARSSGVDEALAIATLKS-ALYTVARPLALGAVLAGAADGDA 233 Query: 208 -ERLRCFGENLGIIFQLADDLL 228 E LR G G+ FQL DDLL Sbjct: 234 LEALRAAGRCAGLAFQLRDDLL 255 >gi|258652703|ref|YP_003201859.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233] gi|258555928|gb|ACV78870.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233] Length = 385 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 32/179 (17%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAII 118 V AA+E +H ++L+HDD+ MD RRG PTVH Q + AI+ Sbjct: 113 VSAALELLHLFALVHDDV--MDESDSRRGVPTVHRQAGRRHAATGAVGDPELFGTSIAIL 170 Query: 119 AGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-EFIDET 175 AG+ L A +I + P T+ + L++ L +G + L G +D F Sbjct: 171 AGDLALAEAEGMIAETPPATR---RLWRHLVVELV--VGQRQDLTGTAARRRDLPFAHSV 225 Query: 176 QVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + +K+G E GA++A A + + L +G++LG F L DD+L D Sbjct: 226 AI-----LKSGRYTVQRPLELGAVIAGAPDSTRLALSNYGQHLGEAFALRDDVLGVWGD 279 >gi|241951352|ref|XP_002418398.1| dimethylallyltranstransferase, putative; farnesyl diphosphate synthetase, putative; farnesyl pyrophosphate synthetase, putative; geranyltranstransferase, putative [Candida dubliniensis CD36] gi|223641737|emb|CAX43698.1| dimethylallyltranstransferase, putative [Candida dubliniensis CD36] Length = 351 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 24/222 (10%) Query: 28 ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN------VNHLTALRV---GAA 78 + +M + D + ++ Y GGK R V + ++ N +N +V G A Sbjct: 28 SYNMPQEAIDWFIKSLNYNTPGGKLNRGLSVVDTYAILNNTTSDKLNDTEYKKVAILGWA 87 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE + Y L+ DD+ MD RRG+P ++ I + +L A I+ K Sbjct: 88 IELLQAYFLVADDM--MDQSKTRRGQPCWYLVEGVNNIAINDSFMLEGAIYILL--KNHF 143 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQK------MKTGALMC 190 + + +L L H + Q LG Q+LD+ DE I + F + K KT Sbjct: 144 RQDPYYVDLLDLFHEVTFQTELG-QLLDLITADEEIVDLNKFSLDKHSFIVIFKTAYYSF 202 Query: 191 FACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230 + A+ NEK+ +++ LG FQ+ DD LDC Sbjct: 203 YLPVVLAMYMSGINNEKDLKQVKDILIPLGEYFQIQDDFLDC 244 >gi|195941332|ref|ZP_03086714.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi 80a] gi|216264524|ref|ZP_03436516.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 156a] gi|218249896|ref|YP_002374836.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi ZS7] gi|221217647|ref|ZP_03589115.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 72a] gi|224533848|ref|ZP_03674436.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi CA-11.2a] gi|225548998|ref|ZP_03769973.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 94a] gi|225550179|ref|ZP_03771139.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 118a] gi|226321631|ref|ZP_03797157.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi Bol26] gi|215980997|gb|EEC21804.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 156a] gi|218165084|gb|ACK75145.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi ZS7] gi|221192324|gb|EEE18543.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 72a] gi|224513141|gb|EEF83504.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi CA-11.2a] gi|225369291|gb|EEG98744.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 118a] gi|225370224|gb|EEG99662.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 94a] gi|226232820|gb|EEH31573.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi Bol26] gi|312148376|gb|ADQ31035.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi JD1] gi|312149235|gb|ADQ29306.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi N40] Length = 347 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 14/200 (7%) Query: 42 AIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 AI GGK+IR L+ L N ++ +E H SLI DD+ DN Sbjct: 50 AIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 RRG +H+ Y +I AGN L Y ++ LK+N +L++ L Sbjct: 108 LKRRGASAIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTLSN 163 Query: 159 MLGGQMLDIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ +DI+ + +I + ++ + ++KT +L A AI+ + K+ F Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223 Query: 215 ENLGIIFQLADDLLDCEEDL 234 + LG+ FQ+ DD+ + + + Sbjct: 224 K-LGVYFQIIDDIKNIKNKI 242 >gi|302833229|ref|XP_002948178.1| hypothetical protein VOLCADRAFT_88541 [Volvox carteri f. nagariensis] gi|300266398|gb|EFJ50585.1| hypothetical protein VOLCADRAFT_88541 [Volvox carteri f. nagariensis] Length = 403 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 20/168 (11%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG +++ TAI+AG+ LL A +++ Sbjct: 134 RIAEIAELIHVASLLHDDV--IDDAETRRGVVSLNNVMGNKTAILAGDFLLARASVSLAA 191 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + + SQ+ L H + + M QM ++ +D KT +LM + Sbjct: 192 LRNSETVVLMSQV---LEHLVSGEIM---QMTATSEQLLDLDHYLAKTYCKTASLMANSS 245 Query: 194 ESGAIMAHASQNEKERLRC------------FGENLGIIFQLADDLLD 229 S A++A C +G +LG+ FQ+ DDLLD Sbjct: 246 RSIAVLAGVPPEHVCGAVCGSGDVVCDMAWSYGRHLGLAFQVVDDLLD 293 >gi|183980313|ref|YP_001848604.1| polyprenyl synthetase IdsB_3 [Mycobacterium marinum M] gi|183173639|gb|ACC38749.1| polyprenyl synthetase IdsB_3 [Mycobacterium marinum M] Length = 329 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 10/153 (6%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E IH ++L+HDD+ MD RRG+ TV + AI+ G+ L A ++ L Sbjct: 77 VELIHNFTLLHDDV--MDGDSTRRGRATVWRVWGVNNAILLGDALHALAIRTLTD---SL 131 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACES 195 + + L + GQ D E V +M KT LM AC Sbjct: 132 GQGVAVNAITRLEQTC--LDLCVGQHQDCSFERCTTVTVPDYLRMAAGKTAVLMACACAL 189 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA+ A A + FG LG+ FQ+ DDL+ Sbjct: 190 GAVSARADAATVAAVERFGYELGLAFQIVDDLI 222 >gi|118464723|ref|YP_881525.1| polyprenyl synthetase [Mycobacterium avium 104] gi|254774993|ref|ZP_05216509.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291] gi|118166010|gb|ABK66907.1| polyprenyl synthetase [Mycobacterium avium 104] Length = 349 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 44/175 (25%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTY 126 H +L+HDD+ +D+ RRG+PT H+++ + AI+ G+ L + Sbjct: 77 HACALVHDDV--IDDSATRRGRPTTHVRFASLHRDRQWQGSPERFGMSAAILLGDLALAW 134 Query: 127 AFEIIS----SPKT-----QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 A +I+ +P+ ++ NIR++ +LGGQ LDI E + Sbjct: 135 ADDIVLGVDLTPQAARRVRRVWANIRTE-------------VLGGQYLDIVAEASAAASI 181 Query: 178 FMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + T C+ GA A + + FG +LG+ FQL DD+L Sbjct: 182 ASAMNVDTFKTACYTVSRPLQLGAAAAADRPDVHDLFSQFGTDLGVAFQLRDDVL 236 >gi|223888948|ref|ZP_03623539.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 64b] gi|224533104|ref|ZP_03673704.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi WI91-23] gi|226320615|ref|ZP_03796175.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 29805] gi|223885764|gb|EEF56863.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 64b] gi|224511831|gb|EEF82232.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi WI91-23] gi|226234034|gb|EEH32755.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 29805] Length = 347 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%) Query: 42 AIRYALLGGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 AI GGK+IR ++ A L N ++ +E H SLI DD+ DN Sbjct: 50 AIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 RRG +H+ Y +I AGN L Y ++ LK+N +L++ L Sbjct: 108 LKRRGASAIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTLSN 163 Query: 159 MLGGQMLDIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 + GQ +DI+ + +I + ++ + ++KT +L A AI+ + K+ F Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223 Query: 215 ENLGIIFQLADDLLDCEEDL 234 + LG+ FQ+ DD+ + + + Sbjct: 224 K-LGVYFQIIDDIKNIKNKI 242 >gi|297823251|ref|XP_002879508.1| hypothetical protein ARALYDRAFT_902550 [Arabidopsis lyrata subsp. lyrata] gi|297325347|gb|EFH55767.1| hypothetical protein ARALYDRAFT_902550 [Arabidopsis lyrata subsp. lyrata] Length = 422 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 14/153 (9%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG ++++ +++AG+ LL+ A +++ K Sbjct: 171 EMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT-- 226 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196 + + L ++ H ++ G+ ++I + + +QK KT +L+ +C++ Sbjct: 227 -EVVALLATAVEH------LVTGETMEITSTTEQRYSMDYYMQKTYYKTASLISNSCKAV 279 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ + +G+NLG+ FQL DD+LD Sbjct: 280 AVLTGQTAEVAVLAFEYGKNLGLAFQLIDDILD 312 >gi|329904645|ref|ZP_08273892.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium IMCC9480] gi|327547880|gb|EGF32635.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium IMCC9480] Length = 281 Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 7/139 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GG+++R+ L A +++ A+ + +E +H SLIHDDL D RRG T+ Sbjct: 39 GGQRVRARLALYAAQALHLSDDDAVTIAVTVELLHNASLIHDDL--QDRDVQRRGCATLW 96 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + E AI AG+ LL+ A+ + + D+ R +L+ H + GQ D+ Sbjct: 97 SAFGENVAICAGDLLLSAAYGNL----CRFSDSTRLPQLLAQVHG-ATASAVHGQCADLS 151 Query: 169 DEFIDETQVFMIQKMKTGA 187 + D I K+GA Sbjct: 152 GQACDIALYEKIAAAKSGA 170 >gi|224534236|ref|ZP_03674814.1| octaprenyl-diphosphate synthase [Borrelia spielmanii A14S] gi|224514338|gb|EEF84654.1| octaprenyl-diphosphate synthase [Borrelia spielmanii A14S] Length = 347 Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 14/193 (7%) Query: 49 GGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR ++ A L N ++ +E H SLI DD+ DN RRG Sbjct: 57 GGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNSLKRRGAS 114 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 +H+ Y +I GN + ++I ++ LK+N +LM+ L + GQ + Sbjct: 115 AIHLIYGIDNSINTGNLIYFLPAKLIE--RSNLKEN--QKLMIYENFFTTLSNLHLGQGI 170 Query: 166 DIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 DI+ + +I + ++ + ++KT +L A AI+ + K+ F + LG+ F Sbjct: 171 DIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFLK-LGVYF 229 Query: 222 QLADDLLDCEEDL 234 Q+ DD+ + + + Sbjct: 230 QIIDDIKNIKNKI 242 >gi|15644868|ref|NP_207038.1| octaprenyl-diphosphate synthase (ispB) [Helicobacter pylori 26695] gi|2313331|gb|AAD07307.1| octaprenyl-diphosphate synthase (ispB) [Helicobacter pylori 26695] Length = 307 Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKAAMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + ++ S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIAKSL-SNAVLRLSRG------------EIEDVFVGGSFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLNFGMAFQIIDDLLDITQD 208 >gi|226493052|ref|NP_001145807.1| hypothetical protein LOC100279314 [Zea mays] gi|219884511|gb|ACL52630.1| unknown [Zea mays] Length = 428 Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 14/153 (9%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG ++++ +++AG+ LL+ A +++ L Sbjct: 177 EMIHVASLLHDDV--LDDADTRRGVSSLNLIMGNKLSVLAGDFLLSRACVALAA----LG 230 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196 + LM + ++ ++ G+ + I + + +QK KT +L+ +C++ Sbjct: 231 NTEVVSLMAT-----AVEHLVTGETMQISTSREQRRSMEYYLQKTYYKTASLISNSCKAV 285 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AI+A + +G NLG+ FQL DD+LD Sbjct: 286 AILAGHTTEVSVLAHEYGRNLGLAFQLIDDVLD 318 >gi|331696598|ref|YP_004332837.1| Geranyltranstransferase [Pseudonocardia dioxanivorans CB1190] gi|326951287|gb|AEA24984.1| Geranyltranstransferase [Pseudonocardia dioxanivorans CB1190] Length = 403 Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 35/211 (16%) Query: 44 RYALLGGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 R+ + GGK+IR ++ A ALR +A+E + +L+HDDL +D+ Sbjct: 87 RFVVGGGKRIRPTFAWWGWRGAGGDPAAAGAALRAVSALELLQACALVHDDL--IDDSAT 144 Query: 101 RRGKPTVHIQY----------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 RRG+PTVH+++ AI+ G+ L +A + + S R+ Sbjct: 145 RRGRPTVHVEFAGRHRDGGWSGPADRFGAAAAILLGDIALAWADDTLQSSGLDAAALARA 204 Query: 145 QLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACES----GA 197 +L GQ LD+ + + KT A + E GA Sbjct: 205 GAPWRAMRTE----VLCGQYLDVLAQATADTSTAAAMRVNRFKTAA---YTVERPLHIGA 257 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +A A R FG ++GI FQL DD+L Sbjct: 258 ALAGADDRLVAAYRGFGTDIGIAFQLRDDML 288 >gi|11322965|emb|CAC16849.1| geranyl diphosphate synthase [Arabidopsis thaliana] Length = 422 Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 14/153 (9%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG ++++ +++AG+ LL+ A +++ K Sbjct: 171 EMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT-- 226 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196 + + L ++ H ++ G+ ++I + + +QK KT +L+ +C++ Sbjct: 227 -EVVALLATAVEH------LVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAV 279 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ + +G NLG+ FQL DD+LD Sbjct: 280 AVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 312 >gi|317180046|dbj|BAJ57832.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F32] Length = 307 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 AL + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 ALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + + S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIAKAL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|217031457|ref|ZP_03436962.1| hypothetical protein HPB128_21g15 [Helicobacter pylori B128] gi|298736814|ref|YP_003729344.1| octaprenyl-diphosphate synthase [Helicobacter pylori B8] gi|216946657|gb|EEC25253.1| hypothetical protein HPB128_21g15 [Helicobacter pylori B128] gi|298356008|emb|CBI66880.1| octaprenyl-diphosphate synthase [Helicobacter pylori B8] Length = 307 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + I S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGEAIA-QILSNAVLRLSRG------------EIEDVFVGESFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKNAKMYADFGLNFGMAFQIIDDLLDITQD 208 >gi|294811348|ref|ZP_06769991.1| Putative polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|326439920|ref|ZP_08214654.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|294323947|gb|EFG05590.1| Putative polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] Length = 362 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 32/205 (15%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104 +L GGK++R L+ E A L + L A ++E +H + L+HDD+ +D+ +RRG Sbjct: 57 SLRGGKRLRVALLHEAARLVTDAEVPGLDEAALSVELLHTHGLVHDDI--VDDAPLRRGA 114 Query: 105 PTVHIQY------DEVT----AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 P+V+ Y E T A++AG+ + +++ + L D +R L L+ Sbjct: 115 PSVYYAYRAEFPGQERTAVGLAVLAGDLAAFLSVQVLL--EAPLPDGLR--LALAQEQTR 170 Query: 155 GLQGMLGGQMLDIQ--------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + GQ LD++ D+F+ + + K+ A ++A E Sbjct: 171 ASAETVLGQFLDLERDVPPLPGDDFL-----HTVTEFKSARYSILAPLRLGLLAAGEDPE 225 Query: 207 KE--RLRCFGENLGIIFQLADDLLD 229 LR + +GI Q+ DD LD Sbjct: 226 PYAGELRRYAVLVGIYEQMRDDYLD 250 >gi|185813044|gb|ACC77966.1| geranyl pyrophosphate synthase [Catharanthus roseus] Length = 420 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 8/150 (5%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 + IH SL+HDD+ +D+ RRG +++ A++AG+ LL+ A ++S K Sbjct: 169 KMIHVASLLHDDV--LDDAETRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLK---N 223 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + S L + H + + M QM D+ T +L+ +C++ A++ Sbjct: 224 TEVVSLLATVVEHLVTGETM---QMTTTSDQRCSMEYYMQKTYYMTASLISNSCKAIALL 280 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + +G+NLG+ FQL DD+LD Sbjct: 281 AGQTSEVAMLAYEYGKNLGLAFQLIDDVLD 310 >gi|283456281|ref|YP_003360845.1| polyprenyl synthase [Bifidobacterium dentium Bd1] gi|283102915|gb|ADB10021.1| idsA Polyprenyl synthase [Bifidobacterium dentium Bd1] Length = 359 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 34/208 (16%) Query: 49 GGKKIRSFLVTECASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L + +F + L + A+E +L+HDD+ +D+ +RR Sbjct: 51 GGKRLRALLTLDSFRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDI--IDDSDLRR 108 Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLSLT 151 G+P+ H T I+ G+ L T + +I + +L D++ L++ Sbjct: 109 GRPSAHRALASGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAF-LTMH 167 Query: 152 HNIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFA-CESGAIMAHAS 203 + + GQ+LD+ E +D+ + + + + KT + A E G + A Sbjct: 168 REVEI-----GQVLDLAVELNPLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLD 222 Query: 204 QNEKERLR-CFGENLGIIFQLADDLLDC 230 + L G LG+ FQLADDLLD Sbjct: 223 ASAARDLAMSIGLPLGLAFQLADDLLDV 250 >gi|171742640|ref|ZP_02918447.1| hypothetical protein BIFDEN_01754 [Bifidobacterium dentium ATCC 27678] gi|171278254|gb|EDT45915.1| hypothetical protein BIFDEN_01754 [Bifidobacterium dentium ATCC 27678] Length = 391 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 34/208 (16%) Query: 49 GGKKIRSFLVTECASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L + +F + L + A+E +L+HDD+ +D+ +RR Sbjct: 83 GGKRLRALLTLDSFRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDI--IDDSDLRR 140 Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLSLT 151 G+P+ H T I+ G+ L T + +I + +L D++ L++ Sbjct: 141 GRPSAHRALASGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAF-LTMH 199 Query: 152 HNIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFA-CESGAIMAHAS 203 + + GQ+LD+ E +D+ + + + + KT + A E G + A Sbjct: 200 REVEI-----GQVLDLAVELNPLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLD 254 Query: 204 QNEKERLR-CFGENLGIIFQLADDLLDC 230 + L G LG+ FQLADDLLD Sbjct: 255 ASAARDLAMSIGLPLGLAFQLADDLLDV 282 >gi|90415703|ref|ZP_01223637.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [marine gamma proteobacterium HTCC2207] gi|90333026|gb|EAS48196.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [marine gamma proteobacterium HTCC2207] Length = 339 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 13/173 (7%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L A RY GK R+ L +N L AA E +H SLIHDD+ D Sbjct: 38 LAPAARYHFKNPGKSFRAQLALTSGVSLGLNTQDNLHWAAACELLHNASLIHDDIS--DA 95 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG+ ++H + A+ G+ ++ AFE+ + ++ + +++L +Q Sbjct: 96 STHRRGQESIHQHFGADMALCLGDWMVAKAFELGA------RNALYGGKLVTLLAQ-AMQ 148 Query: 158 GMLGGQMLDI-QDEFIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNEK 207 GQ+ DI Q E + I K KT L+ + AI A +A QNEK Sbjct: 149 ETCSGQISDITQRECANLDDWQRIAKGKTAPLLIAPIKGAAIAAGLNAEQNEK 201 >gi|322691366|ref|YP_004220936.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456222|dbj|BAJ66844.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp. longum JCM 1217] Length = 360 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 31/205 (15%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK++R+ L + + + R + AIE +L+HDD+ +D +RRG Sbjct: 52 GGKRLRALLALDAFDILAGDVTPDWRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRG 109 Query: 104 KPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTHN 153 KP+ H ++ AI G GL+ T EI ++L + + ++ L++ Sbjct: 110 KPSAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQRE 169 Query: 154 IGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + + GQ+LD+ E + + KT + A A++A + Sbjct: 170 VEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPD 224 Query: 207 KER--LRCFGENLGIIFQLADDLLD 229 + R G LG+ FQLADDLLD Sbjct: 225 QARHCALAVGRPLGLAFQLADDLLD 249 >gi|317179364|dbj|BAJ57152.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F30] Length = 307 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 AL + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 ALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S +L+ N L+ G +I+D F+ D+ + + I + KT Sbjct: 117 SK---------MGELIAQALSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|294817076|ref|ZP_06775718.1| Polyprenyl synthase [Streptomyces clavuligerus ATCC 27064] gi|326446035|ref|ZP_08220769.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|294321891|gb|EFG04026.1| Polyprenyl synthase [Streptomyces clavuligerus ATCC 27064] Length = 385 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 19/226 (8%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78 D L L H+ + + L++ +R+ + GG++ R LV L + AA Sbjct: 35 WDGLDLALHGHVADRLHRALVAPVRHLIDHGGRRWRPALVAHTIELLGGAPERFGPLVAA 94 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E H SL+ DD+ D +RRG+PT H + A+ AG +AF+ Sbjct: 95 LELAHTGSLVVDDV--EDGSAVRRGRPTAHAAFGTAVALNAGTAAY-FAFDRAIDLTLPD 151 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--------ET-----QVFMIQKMKT 185 ++ +L + M GQ LD+Q + E+ V + ++K+ Sbjct: 152 DSDLAGELRALFLAALRAAHM--GQALDLQGHHPELEHALTSGESAPVLHSVRLTHRLKS 209 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 G L+ A++ A L FG LG +Q+ DD D E Sbjct: 210 GTLVAAGFTMAALVTCAPPALVGALTDFGMALGTAYQITDDTADLE 255 >gi|238879551|gb|EEQ43189.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor [Candida albicans WO-1] Length = 507 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 53/207 (25%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127 R+ +E IH SL+HDD+ +D RRG+P+ +I + A++AG+ LL A Sbjct: 199 RLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 256 Query: 128 ------FEIISS-------------PKTQLKDNIRSQL---------------MLSLTHN 153 E++S+ T L++N ++ + + H Sbjct: 257 LRNPEVIELLSTTIANLVEGEFMQLKNTVLQNNNNDEIFNDGDVKSIPQPTGKVPTKLHQ 316 Query: 154 IGLQGML----GGQMLD---IQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHA 202 +Q GG D + D I+ F KT +LM +C + A+++ A Sbjct: 317 YSVQQQQRTTNGGDSADAAVVVDHEINVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGA 376 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD 229 + E FG NLG+ FQ+ DD+LD Sbjct: 377 QDDIIENCYQFGRNLGLCFQIVDDMLD 403 >gi|210134440|ref|YP_002300879.1| octaprenyl-diphosphate synthase [Helicobacter pylori P12] gi|210132408|gb|ACJ07399.1| octaprenyl-diphosphate synthase [Helicobacter pylori P12] Length = 307 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + + S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIAKAL-SNAVLRLSRG------------EIEDVFVGESFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 M + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFMEASLKSMAILL----NKDAKMYADFGLNFGMEFQIIDDLLDITQD 208 >gi|254778946|ref|YP_003057051.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Helicobacter pylori B38] gi|254000857|emb|CAX28789.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Helicobacter pylori B38] Length = 307 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + I S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGEAIA-QILSNAVLRLSRG------------EIEDVFVGGSFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLNFGMAFQIIDDLLDITQD 208 >gi|93278762|pdb|2AZL|A Chain A, Crystal Structure For The Mutant F117e Of Thermotoga Maritima Octaprenyl Pyrophosphate Synthase Length = 299 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 16/155 (10%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L A + Sbjct: 68 AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAEHTVE---- 121 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 ++ +N +L + + IG M ++++ + I + + I + K+GAL A + Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A++ E L G +G I+Q+ DD++D Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208 >gi|320163837|gb|EFW40736.1| geranyltranstransferase [Capsaspora owczarzaki ATCC 30864] Length = 347 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 33/241 (13%) Query: 16 IDTILDDLLLQTASHMQT-QHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNVNHLT-- 71 DT++ D++ + +T + + + +S ++Y + GGK R V + LT Sbjct: 14 FDTLVADVMDVAVNQYETPKESQQWMSENLKYNVPGGKMNRGLSVVSTYEILLGRPLTKD 73 Query: 72 ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A +G ++E + + L+ DD+ MD RRG+P + + EV+ I + + Sbjct: 74 ELFKAQVLGWSVEWLQAFFLVADDM--MDQSQTRRGQPCWYKK-PEVSNIAIND-----S 125 Query: 128 FEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMI 180 F I S LK RS+ +L L H + Q LG QMLD+ ++ +D T+ F + Sbjct: 126 FVIEGSIYILLKKYFRSEPYYVDLLDLLHEVTFQTELG-QMLDLITAPEDHVDLTR-FTL 183 Query: 181 QKMKT-----GALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDCEE 232 K KT A+ F M A +G FQ+ DD LDC Sbjct: 184 SKYKTIVKYKTAVYSFYLPVAMAMHMAGVKNPAAFAAAHSILMEMGEFFQIQDDYLDCYG 243 Query: 233 D 233 D Sbjct: 244 D 244 >gi|28572702|ref|NP_789482.1| polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27] gi|28410834|emb|CAD67220.1| putative polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27] Length = 354 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 41/232 (17%) Query: 33 TQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALR-VGAAIECIHCYSLI 88 ++H + + ++ GGK++R+ F EC N + + AIE H +L+ Sbjct: 21 SKHTESMYDYLQDFTFGGKRLRAKLCFTGAECIGPIPENLFELISDIAVAIELFHAAALV 80 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIIS 132 HDDL +D RRG P VH ++ + +AI+AG+ LL ++ Sbjct: 81 HDDL--IDKSDSRRGLPAVHKRFAKFHEENSFVKCKENFGTASAILAGDMLLVWSSRFFY 138 Query: 133 SPKTQLKDNIRSQ-------LMLSLTHNIGLQGMLGGQM----------LDIQDEFIDET 175 S L + Q M L H + + ++G M L +Q E +D + Sbjct: 139 SALNNLLNTTAKQASDFHLDTMNILWHEMQNEVVIGQYMDVLHEHRWRQLSVQ-EALDIS 197 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + MI+K ++ C GA A+ E L+ F +G+ FQ+ +D+ Sbjct: 198 KEIMIKKSGKYSVQVPLC-LGANTNGATIEHLEVLKRFSLPIGLAFQMRNDI 248 >gi|295106544|emb|CBL04087.1| farnesyl-diphosphate synthase /geranylgeranyl-diphosphate synthase [Gordonibacter pamelaeae 7-10-1-b] Length = 349 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 5/188 (2%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y+ GGK+ R + + A AAIE H +LIHDD+ D +RRG+ Sbjct: 56 YSQNGGKRHRPLICFAACRAVGGDMARATSAAAAIEHFHTAALIHDDI--ADEAELRRGE 113 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLG 161 P +H+ AI G+ L+ +I+ P +R ++L+ I Q + Sbjct: 114 PCLHLTEGMGLAINMGDLALSLVNGTVINDPLLDDATKVRVVNELIEMTRRTIEGQALDI 173 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 G D + + E + M GAI+ ++ E E LR +G + G+ F Sbjct: 174 GWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAIIGGGTEAEIEALRNYGLDTGLAF 233 Query: 222 QLADDLLD 229 Q+ DDLL+ Sbjct: 234 QIQDDLLN 241 >gi|227547664|ref|ZP_03977713.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227211919|gb|EEI79815.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 360 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 31/205 (15%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK++R+ L + + + R + AIE +L+HDD+ +D +RRG Sbjct: 52 GGKRLRALLALDAFDVLAGDVTPDWRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRG 109 Query: 104 KPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTHN 153 KP+ H ++ AI G GL+ T EI ++L + + ++ L++ Sbjct: 110 KPSAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQRE 169 Query: 154 IGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + + GQ+LD+ E + + KT + A A++A + Sbjct: 170 VEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPD 224 Query: 207 KER--LRCFGENLGIIFQLADDLLD 229 + R G LG+ FQLADDLLD Sbjct: 225 QARHCALAVGRPLGLAFQLADDLLD 249 >gi|302549101|ref|ZP_07301443.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] gi|302466719|gb|EFL29812.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] Length = 350 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 18/196 (9%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 A GGK +R L A + + A+E +H +SL+HDD+ MD RR +P Sbjct: 66 AAPGGKGVRQALAVLGAEVAGAPARAGVAAAVAVELVHTFSLLHDDI--MDGDADRRRRP 123 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 V Y A++AG+ L A E +++ + + +R T + L ++ GQ Sbjct: 124 AVWKAYGTGPAVLAGDALFALAVETLAA-QPGGAEAVR-------TLSAALGDLVRGQAD 175 Query: 166 DI--------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 D+ E + + + + KTGAL+ A GA + A+ L G +L Sbjct: 176 DLLFTERPWTGPERVRPDEYRAVAEHKTGALLGCAAALGAALGGAAPETVAALDRVGRHL 235 Query: 218 GIIFQLADDLLDCEED 233 GI FQ+ DD+L D Sbjct: 236 GIAFQIVDDVLGIWGD 251 >gi|159901006|ref|YP_001547253.1| polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|159894045|gb|ABX07125.1| Polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 339 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 8/183 (4%) Query: 50 GKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK +R F + CA++ + A + AAI+ +H +SLIHDD+ D+ RRG+ TV Sbjct: 50 GKLLRPRFCLLACAAV-GGDPQQAEPLAAAIQLLHDFSLIHDDIE--DHSPTRRGRETVW 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ AI G+G+ T A ++ ++ + ++ N + + GQ LD+ Sbjct: 107 KLWEVPQAINVGDGMFTLA-QLSLFRLAEVGVESSVVVEIARRFNQTIIRLCEGQYLDMS 165 Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E I E + KT AL+ A GAI+ +A++ + L +GE LG+ FQ+ D Sbjct: 166 FEQRLDISEGDYLAMISRKTAALIAAAAGLGAILGNANREQAAALYNWGEALGLAFQIED 225 Query: 226 DLL 228 D+L Sbjct: 226 DML 228 >gi|261837687|gb|ACX97453.1| octaprenyl-diphosphate synthase [Helicobacter pylori 51] Length = 307 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 AL + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 ALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S +L+ N L+ G +I+D F+ D+ + + I + KT Sbjct: 117 SK---------MGELIAQALSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|115375696|ref|ZP_01462950.1| IdsA [Stigmatella aurantiaca DW4/3-1] gi|310825166|ref|YP_003957524.1| polyprenyl synthetase [Stigmatella aurantiaca DW4/3-1] gi|115367259|gb|EAU66240.1| IdsA [Stigmatella aurantiaca DW4/3-1] gi|309398238|gb|ADO75697.1| Polyprenyl synthetase [Stigmatella aurantiaca DW4/3-1] Length = 391 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 22/197 (11%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y L K +R L ALR A+E H LIHDD+ D ++RRG+ Sbjct: 46 YPLREAKGLRPALCIAACRASGGTLEAALRPAVALELYHNAFLIHDDI--EDESHLRRGR 103 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI------RSQLMLSLTHNIGLQG 158 PT+H + AI G+ +L + + L DNI S +L + + Sbjct: 104 PTLHQLHGVPVAINVGDAMLALSLQ-------PLLDNIGFIGLGPSLRILQEVARMARES 156 Query: 159 MLGGQMLDI------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GQ L++ D V M+++ GA+ A + +L Sbjct: 157 A-EGQALELDWIRRGHWALEDADYVRMVEQKTCWYSFITPVTLGALAARQNPAHTAQLAE 215 Query: 213 FGENLGIIFQLADDLLD 229 F LGI FQ+ DDLL+ Sbjct: 216 FARCLGIAFQIQDDLLN 232 >gi|242815971|ref|XP_002486676.1| polyprenyl-diphosphate synthase, putative [Talaromyces stipitatus ATCC 10500] gi|218715015|gb|EED14438.1| polyprenyl-diphosphate synthase, putative [Talaromyces stipitatus ATCC 10500] Length = 960 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 13/183 (7%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L GK +RS L+ + V + + I +H SL+ DD+ D +RRG+P Sbjct: 682 LPGKNMRSQLIQSFNTWLQVPAESLAIIDKVISMLHTASLLIDDI--QDQSLLRRGQPVA 739 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-D 166 H + A+ +GN + A I ++ I ++ L G++ ++ Sbjct: 740 HSIFGTAQAMNSGNYVYFLALREIQKLQSPKAITIYVDSLIDLHRGQGMELFWRDSLMCP 799 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 ++E++D M+ KTG L C A + + A K LGIIFQ+ DD Sbjct: 800 TEEEYLD-----MVAN-KTGGLFCLAIQ----LMQAEATVKVDFVPLVRLLGIIFQICDD 849 Query: 227 LLD 229 L+ Sbjct: 850 YLN 852 >gi|11322972|emb|CAC16851.1| geranyl diphosphate synthase [Citrus sinensis] Length = 321 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 28/212 (13%) Query: 38 RLLSAIRYAL---LGGKKIRSFLVTECASLFNVN------------HLTALR-----VGA 77 +L SA Y + GK+ R ++ A+ NV T LR + Sbjct: 8 KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDASATELRTRQQCIAE 67 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 E IH SL+HDD+ +D+ RRG +++ A++AG+ LL+ A ++S K Sbjct: 68 ITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNT 125 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 + + L + H + + M QM D+ KT +L+ +C++ A Sbjct: 126 ---EVVTLLATVVEHLVTGETM---QMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIA 179 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++A + +G+NLG+ +QL DD+LD Sbjct: 180 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLD 211 >gi|261839097|gb|ACX98862.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori 52] Length = 307 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGDFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S +L+ N L+ G +I+D F+ D+ + + I + KT Sbjct: 117 SK---------MGELIAKTLSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|195624250|gb|ACG33955.1| decaprenyl-diphosphate synthase subunit 1 [Zea mays] Length = 428 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 14/153 (9%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG ++++ +++AG+ LL+ A +++ L Sbjct: 177 EMIHVASLLHDDV--LDDADTRRGVSSLNLIMGNKLSVLAGDFLLSRACVALAA----LG 230 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196 + LM + ++ ++ G+ + I + + +QK KT +L+ +C++ Sbjct: 231 NTEVVSLMAT-----AVEHLVTGETMQISTSREQRRSMEYYLQKTYYKTASLISNSCKAV 285 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AI+A + +G NLG+ FQL DD+LD Sbjct: 286 AILAGHTTEVSVLAYEYGRNLGLAFQLIDDVLD 318 >gi|227504679|ref|ZP_03934728.1| geranylgeranyl pyrophosphate synthase [Corynebacterium striatum ATCC 6940] gi|227198689|gb|EEI78737.1| geranylgeranyl pyrophosphate synthase [Corynebacterium striatum ATCC 6940] Length = 363 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 37/212 (17%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMDN 97 + L GGK+IR A + L + +++E I +LIHDD+ +D+ Sbjct: 48 FVLDGGKRIRPTYA--WAGFLGAHGLESGEDAQAMATAASSLEFIQACALIHDDI--IDS 103 Query: 98 GYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 RRG PTVH + + AI+ G+ L +A +++ Sbjct: 104 SDTRRGNPTVHRAVAAQHRAKGYHGDADFFGQSVAILVGDLALAWAEDMLQGSGLSGAAL 163 Query: 142 IRSQLMLSLTHNIGLQG-MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----G 196 R++ S G++ ++GGQ+LDI E + + + + E G Sbjct: 164 HRARGPWS-----GMRTEVIGGQILDISLEAAGSEDLALANSVNRYKTAAYTIERPLHLG 218 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A +A A + R +G ++GI FQL DD L Sbjct: 219 AAVAGAEPALIDAFRGYGRDIGIAFQLRDDQL 250 >gi|219847821|ref|YP_002462254.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485] gi|219542080|gb|ACL23818.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485] Length = 361 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 16/148 (10%) Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY-AFEIISSPKTQLKDNIRS 144 SL+HDDL +D RRG+ TVH ++D A++ G+ A E+ SP ++ Sbjct: 120 SLVHDDL--VDQANRRRGQITVHARWDNDVALMVGDYFFALAAAEMARSPDPRII----- 172 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDET--QVFMIQKMKTGALMCFACESGAIMAH 201 + +Q + G++ + E +D Q KT L AC++G + Sbjct: 173 -----TFYAEAVQTICEGELSPVTVAEPLDRALRQYLYKTGAKTAVLFEAACKAGMVSGG 227 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229 S ++ L +G +LG+ FQ+ DD+LD Sbjct: 228 GSDDQILALGRYGYDLGMAFQIIDDVLD 255 >gi|28493184|ref|NP_787345.1| geranylgeranyl pyrophosphate synthase [Tropheryma whipplei str. Twist] gi|28476225|gb|AAO44314.1| geranylgeranyl pyrophosphate synthase [Tropheryma whipplei str. Twist] Length = 379 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 41/232 (17%) Query: 33 TQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALR-VGAAIECIHCYSLI 88 ++H + + ++ GGK++R+ F EC N + + AIE H +L+ Sbjct: 46 SKHTESMYDYLQDFTFGGKRLRAKLCFTGAECIGPIPENLFELISDIAVAIELFHAAALV 105 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIIS 132 HDDL +D RRG P VH ++ + +AI+AG+ LL ++ Sbjct: 106 HDDL--IDKSDSRRGLPAVHKRFAKFHEENSFVKCKENFGTASAILAGDMLLVWSSRFFY 163 Query: 133 SPKTQLKDNIRSQ-------LMLSLTHNIGLQGMLGGQM----------LDIQDEFIDET 175 S L + Q M L H + + ++G M L +Q E +D + Sbjct: 164 SALNNLLNTTAKQASDFHLDTMNILWHEMQNEVVIGQYMDVLHEHRWRQLSVQ-EALDIS 222 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + MI+K ++ C GA A+ E L+ F +G+ FQ+ +D+ Sbjct: 223 KEIMIKKSGKYSVQVPLC-LGANTNGATIEHLEVLKRFSLPIGLAFQMRNDI 273 >gi|184201731|ref|YP_001855938.1| geranylgeranyl pyrophosphate synthase [Kocuria rhizophila DC2201] gi|183581961|dbj|BAG30432.1| geranylgeranyl pyrophosphate synthase [Kocuria rhizophila DC2201] Length = 382 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 94/231 (40%), Gaps = 70/231 (30%) Query: 47 LLGGKKIR---------SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L GGK IR SF ++ +V +R+ A+ E +H L+HDD+ +D Sbjct: 68 LAGGKLIRPRLTLIAWRSFTAPAGGAVPSVPDAQCVRLAASFEMLHAALLVHDDV--VDR 125 Query: 98 GYIRRGKPTVHIQY-----------------DEVTAIIAGN------------------- 121 + RRG+PTV + E AI+AG+ Sbjct: 126 DWRRRGRPTVGELFRRDAAAAGAPAHEAEHAGESAAILAGDLLLAGALRLASTCTGDPAT 185 Query: 122 --GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 + FE +++ D+ L+LSL G + +QD + Sbjct: 186 SRAVADVVFEAVTASAAGELDD----LLLSLHR-------FGAEHPGVQD-------ILD 227 Query: 180 IQKMKTGALMCFAC--ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 ++++KT A F +G+++A AS E E+L G LG+ +Q+ DD+L Sbjct: 228 MERLKT-ATYSFEAPLRAGSLLAGASAEESEQLAHAGALLGVGYQVVDDVL 277 >gi|242096724|ref|XP_002438852.1| hypothetical protein SORBIDRAFT_10g027240 [Sorghum bicolor] gi|241917075|gb|EER90219.1| hypothetical protein SORBIDRAFT_10g027240 [Sorghum bicolor] Length = 431 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 14/153 (9%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG ++++ +++AG+ LL+ A +++ L Sbjct: 180 EMIHVASLLHDDV--LDDADTRRGVSSLNLIMGNKLSVLAGDFLLSRACVALAA----LG 233 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196 + LM + ++ ++ G+ + I + + +QK KT +L+ +C++ Sbjct: 234 NTEVVSLMAT-----AVEHLVTGETMQISTSREQRRSMEYYLQKTYYKTASLISNSCKAV 288 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AI+A + +G NLG+ FQL DD+LD Sbjct: 289 AILAGHTAEVSVLAYEYGRNLGLAFQLIDDVLD 321 >gi|237832673|ref|XP_002365634.1| hexaprenyl pyrophosphate synthetase protein, putative [Toxoplasma gondii ME49] gi|211963298|gb|EEA98493.1| hexaprenyl pyrophosphate synthetase protein, putative [Toxoplasma gondii ME49] Length = 536 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 21/188 (11%) Query: 61 CASLFNVNHLTALRVGAAI------ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 C + F+ T + G + E IH SL+HDD+ +D RRG+P H ++ Sbjct: 218 CGAAFSAKSQTRRKDGLELCMVHVAELIHTASLMHDDV--IDGADTRRGQPATHRRFCNK 275 Query: 115 TAIIAGNGLLTY---------AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TAI+ G+ LL+ + E++ + ++ ++ +L+ +L+ + G G + Sbjct: 276 TAILGGDFLLSRGNGIVAMCGSTEVMMRMSSVIESLVKGELIQALSDSRGDLGERQAEST 335 Query: 166 DIQDEFIDET---QVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + E + + ++ + KT +L+ +C AI+ FG +G+ F Sbjct: 336 EPLREHLKRKSALRTYLTKTYHKTASLIAESCACLAILMGLPSRWVTWSADFGACVGMAF 395 Query: 222 QLADDLLD 229 QL DD LD Sbjct: 396 QLYDDELD 403 >gi|91076666|ref|XP_971444.1| PREDICTED: similar to AGAP006894-PA [Tribolium castaneum] gi|270002646|gb|EEZ99093.1| hypothetical protein TcasGA2_TC004978 [Tribolium castaneum] Length = 307 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 25/214 (11%) Query: 26 QTASHMQTQHNDR-----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 +TA + ++ ND+ LL Y + GK IRS L N++ + + Sbjct: 6 KTAPCVYSRDNDKCQDEKLLQPFTYIMQTPGKNIRSKLARAFNYWLNISEEKLKAIEEIV 65 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SL+ DD+ DN +RRG P H Y + I A N ++ A + + Sbjct: 66 EMMHNASLLLDDI--QDNSILRRGVPVAHSIYGVPSTINAANYVIFIALQRVLELNHPEA 123 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACES 195 ++ +Q +L L G++ + +D + DE + I+ KTG L A Sbjct: 124 VSVYTQQVLELHRGQGME-------IYWRDSYTCPTEDEYKQMTIR--KTGGLFMLAIR- 173 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +M S+N+ + + G LG+ FQ+ DD L+ Sbjct: 174 --LMQLFSENKADYTKLTG-ILGLFFQIRDDFLN 204 >gi|27261729|gb|AAN86061.1| geranylgeranyl diphosphate synthase [Citrus unshiu] Length = 426 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG +++ A++AG+ LL+ A ++S K Sbjct: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNT-- 230 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + + L + H + + M QM D+ KT +L+ +C++ A++ Sbjct: 231 -EVVTLLATVVEHLVTGETM---QMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALL 286 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229 A + +G+NLG+ +QL DD+LD Sbjct: 287 AGQTAEVAILAFDYGKNLGLAYQLIDDVLD 316 >gi|320449550|ref|YP_004201646.1| geranylgeranyl diphosphate synthetase [Thermus scotoductus SA-01] gi|320149719|gb|ADW21097.1| geranylgeranyl diphosphate synthetase [Thermus scotoductus SA-01] Length = 330 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 83/207 (40%), Gaps = 16/207 (7%) Query: 35 HNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 H D A+ Y GGK +R LV +L G A+E + LIHDD+ Sbjct: 22 HPDPAYQALLQEYPSRGGKMLRGLLVVYAGLAHGATLEASLWAGTALELFQNWVLIHDDI 81 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 D RRG+P +H Y A+ AG+ L + ++ L + + +L+ H Sbjct: 82 --EDGSEERRGRPALHRLYPMPLALNAGDALHGEMWGLLIR---GLNEGLFGPEVLAEFH 136 Query: 153 NIGLQGMLGGQMLDI------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + + GQ LD+ + + E + M+ GA++ + + Sbjct: 137 QV-VHRTAYGQHLDLLWTLSGRLDLAPEDYLHMVAHKAAYYTAVAPLRLGALL--SGKTP 193 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 G LGI FQ+ DD+L+ E D Sbjct: 194 PALYEEAGLKLGIAFQIMDDVLNLEGD 220 >gi|256371287|ref|YP_003109111.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331] gi|256007871|gb|ACU53438.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331] Length = 362 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 28/199 (14%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L A V+ L +G AIE +H ++L+HDD+ MD +RRG Sbjct: 62 GGKRLRPALAFWAARGLGVDGDDEL-LGDLLVAIELLHTFALVHDDI--MDRSELRRGAV 118 Query: 106 TVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 TVH + Y + I+ G+ LT A + + ++ +QL L Sbjct: 119 TVHARARDEHRSLKLRGEAETYGDAIGILVGDLALTLADGALEAAPLPVRATF-TQLKLE 177 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + L + Q+ D E + +F K + GA++A + Sbjct: 178 VNLGQYLDVVASAQLFDTP-EHAEHIALFKSAKYTVERPLHL----GALLADPADGVLAA 232 Query: 210 LRCFGENLGIIFQLADDLL 228 L F LG+ FQL DD+L Sbjct: 233 LSRFALPLGLAFQLRDDVL 251 >gi|317482452|ref|ZP_07941469.1| polyprenyl synthetase [Bifidobacterium sp. 12_1_47BFAA] gi|316916112|gb|EFV37517.1| polyprenyl synthetase [Bifidobacterium sp. 12_1_47BFAA] Length = 360 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L + + +T R A AIE +L+HDD+ +D +RR Sbjct: 52 GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 108 Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152 GKP+ H ++ AI G GL+ T EI ++L + + ++ L++ Sbjct: 109 GKPSAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQR 168 Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 + + GQ+LD+ E + + KT + A A++A Sbjct: 169 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 223 Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229 ++ R G LG+ FQLADDLLD Sbjct: 224 DQARHCALAVGRPLGLAFQLADDLLD 249 >gi|297379465|gb|ADI34352.1| octaprenyl-diphosphate synthase [Helicobacter pylori v225d] Length = 307 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 14/163 (8%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 S + + S +L L+ ++ M G+ + D+ + + I + KT + Sbjct: 117 SKMGESIAQTL-SNAVLRLSRG-EIEDMFVGECFNS-----DKQKYWRILEDKTAHFIEA 169 Query: 192 ACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 170 SLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|308063102|gb|ADO04989.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori Sat464] Length = 307 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + + S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIAQTL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDTKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|317012084|gb|ADU82692.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Helicobacter pylori Lithuania75] Length = 307 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 31/182 (17%) Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 T+ SL V +L A+ +E I SL+HDD+ +D +RR P+++ + A++ Sbjct: 51 TDAISLDKVFNLCAI-----VEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVM 103 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------ 172 G+ + AF +S + I S +L L+ +I+D F+ Sbjct: 104 LGDVFYSKAFFELSKMGEAIA-QILSNAVLRLSRG------------EIEDVFVGESFNS 150 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCE 231 D+ + + I + KT + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD Sbjct: 151 DKQKYWRILEDKTAHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDIT 206 Query: 232 ED 233 +D Sbjct: 207 QD 208 >gi|312132590|ref|YP_003999929.1| ispa [Bifidobacterium longum subsp. longum BBMN68] gi|311773533|gb|ADQ03021.1| IspA [Bifidobacterium longum subsp. longum BBMN68] Length = 360 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L + + +T R A AIE +L+HDD+ +D +RR Sbjct: 52 GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 108 Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152 GKP+ H ++ AI G GL+ T EI ++L + + ++ L++ Sbjct: 109 GKPSAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQR 168 Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 + + GQ+LD+ E + + KT + A A++A Sbjct: 169 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 223 Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229 ++ R G LG+ FQLADDLLD Sbjct: 224 DQARHCALAVGRPLGLAFQLADDLLD 249 >gi|308061594|gb|ADO03482.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori Cuz20] Length = 307 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + + S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIAQTL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|239928994|ref|ZP_04685947.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672] Length = 308 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 14/163 (8%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H ++L+HDD+ MD RR +PT + + AI+AG+ L A +++ Sbjct: 99 ELVHNFTLLHDDV--MDRDTTRRHRPTAWTVFGDADAILAGDALQALALGLLAEDPHPAA 156 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-----KTGALMCFACE 194 ++L + + GQ D E +V + + + KTGAL+ AC Sbjct: 157 PAAAARLAHCVVE------LCAGQHTDTAMERRGPGEVTLAETLTMAEAKTGALLGCACA 210 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 GA+ A A + L FG G+ FQL DD++ D P++ Sbjct: 211 IGALYADAEDADVAALDAFGREAGLAFQLIDDVIGIWGD-PRR 252 >gi|149918648|ref|ZP_01907136.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1] gi|149820489|gb|EDM79903.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1] Length = 388 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 13/194 (6%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y L K +R L A + AL AA+E +H LIHDD+ D RRG+ Sbjct: 46 YPLRAAKGLRPALCVAAARALGASRSAALPSAAALELLHNAFLIHDDVE--DESLARRGE 103 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFE--------IISSPKTQLKDNIRSQLMLSLTHNIG- 155 PT+ +Y + TA+ G+ +L A I P ++ D +R ++++ Sbjct: 104 PTLQRRYGQATAMNMGDAMLALALGPLLDNTGVIGLGPALEVLDLVRETVVVTAAGQARE 163 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 L+ + G+ D ++ + ++ K + + GA +A + + +L + Sbjct: 164 LEWIRQGRW-DFGSDYAAAYEALVVAKTAHYSFITPVV-VGATIAEVRGDARAQLAAYAR 221 Query: 216 NLGIIFQLADDLLD 229 ++G+ FQ+ DDLL+ Sbjct: 222 HVGVAFQITDDLLN 235 >gi|14625010|dbj|BAB61885.1| geranylgeranyl diphosphate synthase [Rhodovulum strictum] Length = 131 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 HDD+P MDN +RRGKP +H Y E A++ G+ L+ FE++ Sbjct: 1 HDDMPCMDNADLRRGKPALHKAYGEPLALLTGDSLIVAGFEVL 43 >gi|217074292|gb|ACJ85506.1| unknown [Medicago truncatula] Length = 146 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 +G++ GQ++DI E + + ++ I KT AL+ A GAI+ S + E+LR F Sbjct: 1 EGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKF 60 Query: 214 GENLGIIFQLADDLLDC 230 +G++FQ+ DD+LD Sbjct: 61 ATYIGLLFQVVDDILDV 77 >gi|55792579|gb|AAV65383.1| plastid geranylgeranyl diphosphate synthase [Prototheca wickerhamii] Length = 195 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 3/95 (3%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAA 78 L D L A+ +Q + +RL SA+RY+LLGG K++R L L A+ A Sbjct: 84 LVDAALDVAAPLQ--YPERLHSAMRYSLLGGGKRVRPALCLAACELVGGCLEVAMPAACA 141 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113 +E IH SLIHDDLP+MD+ +RRG+P H + E Sbjct: 142 VEMIHTMSLIHDDLPAMDDDDVRRGQPANHRAFGE 176 >gi|271964292|ref|YP_003338488.1| farnesyltranstransferase [Streptosporangium roseum DSM 43021] gi|270507467|gb|ACZ85745.1| putative farnesyltranstransferase [Streptosporangium roseum DSM 43021] Length = 355 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 53/248 (21%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALR 74 +D L + + + + L+SA L GGK++R +F + Sbjct: 15 VDRSLKEFVERQLPQVSAPEVAPLISAAEEFLAGGKRLRPAFCYWGWRGAGGGDDPALFT 74 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAII 118 A++E + +L+HDD+ MD +RRG P H Q+ E AI+ Sbjct: 75 AAASLELLQASALVHDDV--MDASDLRRGMPAAHRRFQTLHEKAGWHGSAEQFGEGAAIL 132 Query: 119 AGNGLLTYAFEIISS----PKT-----QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 GN +L ++ E+ P + Q+ D++R++LM GQ LD+ + Sbjct: 133 LGNLMLIWSGEMWRGSGLPPASLAAAQQVHDHMRTELMC-------------GQYLDLLE 179 Query: 170 EFIDET---QVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRC--FGENLGII 220 + E + K+G ++ E G ++A + C +G ++GI Sbjct: 180 QAHGENTFDSALRVALFKSGK---YSVEQPLRLGLVLAARGRAPWIDRLCEEYGRSVGIA 236 Query: 221 FQLADDLL 228 FQL DD+L Sbjct: 237 FQLRDDIL 244 >gi|301310937|ref|ZP_07216866.1| putative polyprenyl synthetase [Bacteroides sp. 20_3] gi|300831000|gb|EFK61641.1| putative polyprenyl synthetase [Bacteroides sp. 20_3] Length = 518 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 7/162 (4%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R A+EC H SL+HDD+ DN R GKPT++ Y AI G+ LL + ++S Sbjct: 277 RAAIAVECFHKASLVHDDI--QDNDKERYGKPTINALYGVPIAINVGDILLGEGYRLLSL 334 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + + + ++L QGM + + +D V I KT + Sbjct: 335 CDARALTAVAADAHIALCKG---QGMELEWSVSPRPLTLD--WVLEIFCNKTVPAFEVSL 389 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 G I A + + + LGI +QL DD+ D ++D P Sbjct: 390 VLGLICAGDDEVLRRIFHQYSRALGIAYQLLDDIEDFKDDRP 431 >gi|23465984|ref|NP_696587.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium longum NCC2705] gi|23326700|gb|AAN25223.1| probably bifunctional short chain isoprenyl diphosphate synthase [includes: farnesyl pyrophosphate synthetase (Fpp synthetase) (dimethylallyltransferase); geranyltranstransferase ] [Bifidobacterium longum NCC2705] Length = 372 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L + + +T R A AIE +L+HDD+ +D +RR Sbjct: 64 GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 120 Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152 GKP+ H ++ AI G GL+ T EI ++L + + ++ L++ Sbjct: 121 GKPSAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQR 180 Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 + + GQ+LD+ E + + KT + A A++A Sbjct: 181 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 235 Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229 ++ R G LG+ FQLADDLLD Sbjct: 236 DQARHCALAVGRPLGLAFQLADDLLD 261 >gi|269219432|ref|ZP_06163286.1| polyprenyl synthetase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211128|gb|EEZ77468.1| polyprenyl synthetase [Actinomyces sp. oral taxon 848 str. F0332] Length = 363 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 37/216 (17%) Query: 39 LLSAIRYALLGGKKIRSFLVTE---CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 L R L GGK+ R+ L+ CA+ + A+ GAA E +LIHDD+ + Sbjct: 41 FLDPARRLLSGGKRTRAALLAAGYACAT--AEDREPAISAGAAAELYQTSALIHDDI--L 96 Query: 96 DNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 D RR +P+ H+ + +AI+ G+ LL+ + E + Q+ Sbjct: 97 DAASTRRSQPSAHVALARLHLSGGWSGDRAHFGTSSAILLGDFLLSLSTEAFADACAQVG 156 Query: 140 DNI-RSQL--MLSLTHNIGLQGMLGGQMLDIQDEFIDETQ------VFMIQKMKTGALMC 190 R+ L +T + GQ LDI+ E + ++ + Sbjct: 157 PRASRAALRAFARMTTEVAF-----GQYLDIRAENAPPAADSVGAALSVVAHKSARYSVV 211 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 F GA++A AS + + L G LG FQL DD Sbjct: 212 FPLRIGALLAGASGDVLDLLERVGAPLGEAFQLRDD 247 >gi|12055493|emb|CAC20852.1| geranyl diphosphat synthase [Quercus robur] Length = 416 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 8/156 (5%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG +++ A++AG+ LL+ A ++S Sbjct: 159 RIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS 216 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 K + S L + H + + M QM ++ KT +L+ +C Sbjct: 217 LKNT---EVVSLLAKVVEHLVTGETM---QMTTTCEQRCSMEYYMQKTYYKTASLISNSC 270 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ A++ + +G+NLG+ +QL DD+LD Sbjct: 271 KAIALLGGQTSEVAMLAYEYGKNLGLAYQLIDDVLD 306 >gi|308182415|ref|YP_003926542.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori PeCan4] gi|308064600|gb|ADO06492.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori PeCan4] Length = 307 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + + S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIAQTL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|164605008|dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis] Length = 306 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 10/157 (6%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A+ +A+ +H + H++LP D T Y ++ +G++ Y FE++ Sbjct: 101 AMAAASALRLVHASASTHENLPLTDRPRPMPR--TRPTLYGPNIELLIADGIIPYGFELL 158 Query: 132 SSPKTQLKDNIRSQL--MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ------KM 183 + ++N L ++ ++ +G QG++ GQ + Q E + ++F + + Sbjct: 159 ARDDDAAENNSNRVLRAIIEISRAMGSQGVIEGQYNESQYEESEGEEIFHVGWLQNVCRK 218 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 K G L A GAI+ S++E E+LR +G +G++ Sbjct: 219 KEGTLHACAGACGAILGGGSEDEIEKLRRYGLYVGMV 255 >gi|159039018|ref|YP_001538271.1| polyprenyl synthetase [Salinispora arenicola CNS-205] gi|157917853|gb|ABV99280.1| Polyprenyl synthetase [Salinispora arenicola CNS-205] Length = 360 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 58/253 (22%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIR-----YALLGGKKIR---SFLVTECASLF 65 +R+D L D L + M D L+ + + L GGK++R ++ A Sbjct: 17 QRVDKALADFLAARRTWMT--DVDGSLAPVADAVEAFVLGGGKRLRPAFAYWGYRGAGGI 74 Query: 66 NVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------------- 111 + + TAL AA+E + +LIHDDL MD RRG+P VH+++ Sbjct: 75 DTEQVATAL---AALEFVQASALIHDDL--MDRSDTRRGEPAVHLRFAAQHRSAGWDGDA 129 Query: 112 ---DEVTAIIAGNGLLTYAFEIISS----PKTQLK-----DNIRSQLMLSLTHNIGLQGM 159 + AI+ G+ L ++ E++ S P+T + D +RS++ + Sbjct: 130 DGFGDAAAILLGDLCLVWSDELLHSAGLDPRTVARARPIFDQMRSEVTV----------- 178 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGE 215 GQ LD+ + +T V K+ + E ++ A + + +G Sbjct: 179 --GQYLDVLTQATGDTSVEWAGKVARYKSAKYTVERPLLLGAALADATPEIHAAYSTYGL 236 Query: 216 NLGIIFQLADDLL 228 LG FQL DD+L Sbjct: 237 PLGEAFQLRDDVL 249 >gi|291437332|ref|ZP_06576722.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC 14672] gi|291340227|gb|EFE67183.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC 14672] Length = 384 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H ++L+HDD+ MD RR +PT + + AI+AG+ L A +++ Sbjct: 175 ELVHNFTLLHDDV--MDRDTTRRHRPTAWTVFGDADAILAGDALQALALGLLAEDPHPAA 232 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-----KTGALMCFACE 194 ++L + + GQ D E +V + + + KTGAL+ AC Sbjct: 233 PAAAARLAHCVVE------LCAGQHTDTAMERRGPGEVTLAETLTMAEAKTGALLGCACA 286 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA+ A A + L FG G+ FQL DD++ Sbjct: 287 IGALYADAEDADVAALDAFGREAGLAFQLIDDVI 320 >gi|221488090|gb|EEE26304.1| polyprenyl synthetase domain-containing protein, putative [Toxoplasma gondii GT1] Length = 536 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 21/188 (11%) Query: 61 CASLFNVNHLTALRVGAAI------ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 C + F+ T + G + E IH SL+HDD+ +D RRG+P H ++ Sbjct: 218 CGAAFSAKSQTRRKDGLELCMVHVAELIHTASLMHDDV--IDGADTRRGQPATHRRFCNK 275 Query: 115 TAIIAGNGLLTY---------AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TAI+ G+ LL+ + E++ + ++ ++ +L+ +L+ + G G + Sbjct: 276 TAILGGDFLLSRGNGIVAMCGSTEVMMRMSSVIESLVKGELIQALSDSRGDLGERQAESR 335 Query: 166 DIQDEFIDET---QVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + E + + ++ + KT +L+ +C AI+ FG +G+ F Sbjct: 336 EPLREHLKRKSALRTYLTKTYHKTASLIAESCACLAILMGLPSRWVTWSADFGACVGMAF 395 Query: 222 QLADDLLD 229 QL DD LD Sbjct: 396 QLYDDELD 403 >gi|221508609|gb|EEE34178.1| polyprenyl synthetase domain-containing protein, putative [Toxoplasma gondii VEG] Length = 536 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 21/188 (11%) Query: 61 CASLFNVNHLTALRVGAAI------ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 C + F+ T + G + E IH SL+HDD+ +D RRG+P H ++ Sbjct: 218 CGAAFSAKSQTRRKDGLELCMVHVAELIHTASLMHDDV--IDGADTRRGQPATHRRFCNK 275 Query: 115 TAIIAGNGLLTY---------AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 TAI+ G+ LL+ + E++ + ++ ++ +L+ +L+ + G G + Sbjct: 276 TAILGGDFLLSRGNGIVAMCGSTEVMMRMSSVIESLVKGELIQALSDSRGDLGERQAESR 335 Query: 166 DIQDEFIDET---QVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + E + + ++ + KT +L+ +C AI+ FG +G+ F Sbjct: 336 EPLREHLKRKSALRTYLTKTYHKTASLIAESCACLAILMGLPSRWVTWSADFGACVGMAF 395 Query: 222 QLADDLLD 229 QL DD LD Sbjct: 396 QLYDDELD 403 >gi|330971968|gb|EGH72034.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 190 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 38/71 (53%) Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q+ I+D E + + KT L + S A + +A Q + E LR FG++LG+ FQ Sbjct: 17 QLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPQEQSEALRTFGDHLGVAFQ 76 Query: 223 LADDLLDCEED 233 L DDLLD D Sbjct: 77 LVDDLLDYRGD 87 >gi|68072963|ref|XP_678396.1| polyprenyl synthetase [Plasmodium berghei strain ANKA] gi|56498851|emb|CAI04198.1| polyprenyl synthetase, putative [Plasmodium berghei] Length = 541 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 23/164 (14%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA---FEI 130 ++ AA E IH SL+HDD+ +D RRG ++H +Y +I++G+ LL A F Sbjct: 270 KIIAASEIIHMGSLLHDDV--IDESEKRRGSLSLHKKYGNKVSILSGDFLLARACSVFAS 327 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-KTGALM 189 I P+ + S ++ SL LQ L ++ D + ++I+ KT +L Sbjct: 328 IGYPEICKR---FSYVIESLIKGEFLQTNLNYTNIE------DALKTYLIKSYHKTASLF 378 Query: 190 C--FACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLD 229 FAC I + QN++ CF G ++G+ FQL DD LD Sbjct: 379 SHLFAC----IAIISFQNDQITELCFNLGLHIGMAFQLYDDYLD 418 >gi|147901253|ref|NP_001084626.1| hypothetical protein LOC414582 [Xenopus laevis] gi|46249832|gb|AAH68912.1| MGC83119 protein [Xenopus laevis] Length = 348 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 102/254 (40%), Gaps = 29/254 (11%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVT 59 M + S+ QE S + I++DL + + H + RL ++Y LGGK R VT Sbjct: 1 MKSQVSSERQEFSSYFEQIVEDLAAEDSGHPEVGDAIGRLKEVLQYNTLGGKCNRG--VT 58 Query: 60 ECASLFNV---------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110 AS + N AL VG +E + + L+ DD+ MDN RRG+P + + Sbjct: 59 VLASYRELLGPELHKDGNLQRALAVGWCVELLQAFFLVADDI--MDNSVTRRGQPCWYRK 116 Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--- 167 E + A N I + + +L L Q LG Q LD+ Sbjct: 117 --EGIGLDAVNDSFLLEACIYRILRKYCRGKPYYLSLLELFLETSYQTELG-QALDLITA 173 Query: 168 QDEFID-----ETQVFMIQKMKTGALMCFACESGAIMAHAS---QNEKERLRCFGENLGI 219 Q +D E + I K KT A F A M A + E + + +G Sbjct: 174 QPGKVDLNRYTEKRYKAIVKYKT-AFYSFYLPVAAAMYMAGIDGEEEHKNAKTILLEMGE 232 Query: 220 IFQLADDLLDCEED 233 FQ+ DD LDC D Sbjct: 233 FFQIQDDYLDCYGD 246 >gi|317181549|dbj|BAJ59333.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F57] Length = 307 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S +L+ N L+ G +I+D F+ D+ + + I + KT Sbjct: 117 SK---------MGELIAKALSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|307945555|ref|ZP_07660891.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4] gi|307771428|gb|EFO30653.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4] Length = 172 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 2/83 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L CA +F + + A++E +H +L+HDD+ +D +RRGK Sbjct: 57 GGKRLRPMLTLACADMFGYRGDGHVVLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEII 131 + +++ G+ LL AF+++ Sbjct: 115 KLWGNQASVLVGDYLLGQAFKMM 137 >gi|255023966|ref|ZP_05295952.1| hypothetical protein LmonocyFSL_12090 [Listeria monocytogenes FSL J1-208] Length = 248 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 84/155 (54%), Gaps = 14/155 (9%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIE IH S++HDD+ + +RRG+ T+ ++ A+ G+ L + E + TQ Sbjct: 1 AIELIHMASIVHDDVVDDAD--LRRGRETIKSKWGNHIAMYTGDFLFAKSLEYM----TQ 54 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQ--KMKTGALMCFACE 194 +KD +++ +T + G++ ++D++ D++ ++ K KT L+ +C Sbjct: 55 IKDVAAHKMLSHVTVELST-----GEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 109 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 G +++ S+ + ++L FG +G+ FQ+ DD+LD Sbjct: 110 LGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLD 144 >gi|190348241|gb|EDK40664.2| hypothetical protein PGUG_04762 [Meyerozyma guilliermondii ATCC 6260] Length = 329 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 18/178 (10%) Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 NH T + I H SL+ DD+ D RRG P H +Y + + GN + A Sbjct: 53 NHDTIATISEVITVFHNSSLLIDDIE--DGSEFRRGLPAAHTKYGVASTLNCGNLMYFVA 110 Query: 128 FEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLG---GQMLDIQ-DEFIDETQVFMIQ 181 + P+ DN ++ + LS++ NI ++ +L GQ LDI + + T++ I+ Sbjct: 111 LQTAQQKLPQYHPSDN-KNDIALSIS-NILVEELLNLHHGQGLDIHWRDHLKTTKLPSIE 168 Query: 182 KM------KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTG L A + + A ++ ++ + GI+FQ+ DDL++ +D Sbjct: 169 EYMEMIMNKTGGLFRLAVK--LLGAFSTPQDEPTVLAIANLFGIVFQIRDDLMNLVDD 224 >gi|296269323|ref|YP_003651955.1| polyprenyl synthetase [Thermobispora bispora DSM 43833] gi|296092110|gb|ADG88062.1| Polyprenyl synthetase [Thermobispora bispora DSM 43833] Length = 358 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 52/225 (23%) Query: 39 LLSAIRYALLGGKKIRSFLV----------TECASLFNVNHLTALRVGAAIECIHCYSLI 88 LL A L GGK++R ++ A L+N A++E + +LI Sbjct: 39 LLDAAEAFLSGGKRLRPAFCYWGWRAAGGGSDDARLYNA--------AASLELLQASALI 90 Query: 89 HDDLPSMDNGYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIIS 132 HDD+ MD +RRG P+ H Q+ E A++ GN LL +A E+ Sbjct: 91 HDDV--MDASDVRRGMPSAHRRFERMHLESRWHGSAAQFGENAAVLLGNLLLVWAGEMWR 148 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALM 189 + + +Q + H+ L ++ GQ LD+ ++ E + K+G Sbjct: 149 TSGLPAEALAVAQPV----HDHMLTELMCGQYLDLLEQAQGEGTFDSALRVALYKSGK-- 202 Query: 190 CFACES----GAIMAHASQNEKERLRC--FGENLGIIFQLADDLL 228 ++ E G ++A S+ C +G+ +GI FQL DD+L Sbjct: 203 -YSVEQPLRLGLLLAAQSRLPWIDTLCAQYGQRVGIAFQLRDDIL 246 >gi|312376381|gb|EFR23484.1| hypothetical protein AND_12794 [Anopheles darlingi] Length = 299 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 28/204 (13%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV------GAAIECIHC 84 Q + ++ LL Y + GK+IRS L +NH A+ V G ++ +H Sbjct: 17 QKEQDETLLQPFAYIQQIPGKQIRSKLA------LAINHWLAIPVEKLAPIGEIVQMLHN 70 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 SL+ DD+ DN +RRG P H Y + I A N +L A E + + + Sbjct: 71 SSLLIDDIE--DNSILRRGIPVAHKIYGVASTINAANYVLFLALEKVQQLGHPDATKVYT 128 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHA 202 + +L L G++ + +D F E++ + KTG L A +M Sbjct: 129 EQLLELHRGQGME-------IYWRDNFACPTESEYKQMTIRKTGGLFMLAIR---LMQLF 178 Query: 203 SQNEKERLRCFGENLGIIFQLADD 226 S N+K+ LG+ FQ+ DD Sbjct: 179 SDNKKD-FSKLAAILGLYFQIRDD 201 >gi|239621275|ref|ZP_04664306.1| probable bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515736|gb|EEQ55603.1| probable bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 366 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L + + +T R A AIE +L+HDD+ +D +RR Sbjct: 58 GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 114 Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152 G+P+ H ++ AI G GL+ T EI ++L + + ++ L++ Sbjct: 115 GRPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQR 174 Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 + + GQ+LD+ E + + KT + A A++A Sbjct: 175 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 229 Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229 ++ R G LG+ FQLADDLLD Sbjct: 230 DQARHCALAVGRPLGLAFQLADDLLD 255 >gi|296138466|ref|YP_003645709.1| trans-hexaprenyltranstransferase [Tsukamurella paurometabola DSM 20162] gi|296026600|gb|ADG77370.1| Trans-hexaprenyltranstransferase [Tsukamurella paurometabola DSM 20162] Length = 326 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 14/176 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R + + AA+E H +L HDD+ MD RRG P+ + Sbjct: 48 GGKRFRPMFTILSGRIGGAMSDQVITAAAAMELTHLATLYHDDV--MDEADARRGAPSAN 105 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ AI+AG+ Y F S+ L + ++ GQML+++ Sbjct: 106 ARWGNSIAILAGD----YLFARASAFGADLGPRAVGVIAKCFGE------LVTGQMLELK 155 Query: 169 DEF-IDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 D Q ++ KTG+L+ GA+ A ++ +R+ G+ +G+ FQ Sbjct: 156 GAGESDPVQHYLDTIWGKTGSLIATCGLLGALHGGAEEDLAQRMYRIGDAIGMAFQ 211 >gi|213691849|ref|YP_002322435.1| Polyprenyl synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523310|gb|ACJ52057.1| Polyprenyl synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457944|dbj|BAJ68565.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 360 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L + + +T R A AIE +L+HDD+ +D +RR Sbjct: 52 GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 108 Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152 G+P+ H ++ AI G GL+ T EI ++L + + ++ L++ Sbjct: 109 GRPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQR 168 Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 + + GQ+LD+ E + + KT + A A++A Sbjct: 169 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 223 Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229 ++ R G LG+ FQLADDLLD Sbjct: 224 DQARHCALAVGRPLGLAFQLADDLLD 249 >gi|188527047|ref|YP_001909734.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori Shi470] gi|188143287|gb|ACD47704.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori Shi470] Length = 307 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + + S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIAQAL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|19114211|ref|NP_593299.1| geranyltranstransferase Fps1 [Schizosaccharomyces pombe 972h-] gi|3287843|sp|O14230|FPPS_SCHPO RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|2330860|emb|CAB11097.1| geranyltranstransferase Fps1 [Schizosaccharomyces pombe] Length = 347 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 29/206 (14%) Query: 48 LGGKKIRSFLVTECASLF------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 LGGK R V + + ++ A +G +E + + LI DD+ MD R Sbjct: 47 LGGKYNRGLSVIDSYEILLGHPLDEAAYMKAAVLGWMVELLQSFFLIADDI--MDASKTR 104 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQ 157 RG+P ++ GN + AF + S+ LK + R + ++ L H++ Q Sbjct: 105 RGQPCWYLMPG------VGNIAINDAFMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQ 158 Query: 158 GMLGGQM--LDIQDEFIDETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERL 210 LG Q+ L ++ +D ++ F +QK + A F M A E L Sbjct: 159 TELGQQLDLLTAPEDSVDLSK-FSLQKHSFIVIYKTAFYSFYLPVALAMHLAGVATPENL 217 Query: 211 RCFGENL---GIIFQLADDLLDCEED 233 +C + L G FQ+ DD LDC D Sbjct: 218 KCAQDILIILGKYFQVQDDYLDCYGD 243 >gi|46191324|ref|ZP_00206770.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum DJO10A] gi|189439158|ref|YP_001954239.1| geranylgeranyl pyrophosphate synthase [Bifidobacterium longum DJO10A] gi|322689400|ref|YP_004209134.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis 157F] gi|189427593|gb|ACD97741.1| Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum DJO10A] gi|320460736|dbj|BAJ71356.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp. infantis 157F] Length = 360 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L + + +T R A AIE +L+HDD+ +D +RR Sbjct: 52 GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 108 Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152 G+P+ H ++ AI G GL+ T EI ++L + + ++ L++ Sbjct: 109 GRPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQR 168 Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 + + GQ+LD+ E + + KT + A A++A Sbjct: 169 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 223 Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229 ++ R G LG+ FQLADDLLD Sbjct: 224 DQARHCALAVGRPLGLAFQLADDLLD 249 >gi|255085660|ref|XP_002505261.1| predicted protein [Micromonas sp. RCC299] gi|226520530|gb|ACO66519.1| predicted protein [Micromonas sp. RCC299] Length = 327 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 14/159 (8%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD+ +D+ RRG ++++ AI+AG+ LL A ++S Sbjct: 70 RLAEITELIHVASLLHDDV--LDSAATRRGLRALNLEVGNKLAILAGDFLLARASVTLAS 127 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMC 190 +R+ ++ L + L+ ++ G QM + + F KT +L+ Sbjct: 128 --------LRNTEVIELLSRV-LEHLVTGEVMQMTAKPERLMSFDHYFQKTYFKTASLIA 178 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + ++ ++ +G +LG+ FQ DD+LD Sbjct: 179 NSAKAIVLLGGHDTETASHAYDYGRHLGLAFQFQDDVLD 217 >gi|171914615|ref|ZP_02930085.1| polyprenyl synthetase [Verrucomicrobium spinosum DSM 4136] Length = 589 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 15/184 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 G + R FL + L + A+EC H SL+HDD+ DN R G Sbjct: 269 AGNRWRPFLTVASYQALREDPEGPLSDDLKKAAIAVECFHKASLVHDDI--EDNDAQRYG 326 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 + T+H ++ A+ G+ L+ + +++ + ++ + R+ ML + G + + GQ Sbjct: 327 EATLHAEHGMPVALNVGDLLIGEGYRLLAD--SNVRADYRTA-MLKIAAE-GQRELCRGQ 382 Query: 164 ----MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + + + TQV I + KT A + GA ++ +E L + E LGI Sbjct: 383 GAELLWNNHPVALSSTQVLEIFRSKTAPAFEVALKIGAALSGRLDEVEEALHEYSEALGI 442 Query: 220 IFQL 223 +Q+ Sbjct: 443 AYQI 446 >gi|68486364|ref|XP_712917.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314] gi|68486429|ref|XP_712885.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314] gi|46434304|gb|EAK93717.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314] gi|46434339|gb|EAK93751.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314] Length = 351 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 24/223 (10%) Query: 27 TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN---------VNHLTALRVGA 77 + +M + + + ++ Y GGK R V + ++ N + +G Sbjct: 27 VSYNMPQEAIEWFVRSLNYNTPGGKLNRGLSVVDTFAILNNTTSDKLNDTEYKKVALLGW 86 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIE + Y L+ DD+ MD RRG+P ++ I + +L A I+ K Sbjct: 87 AIELLQAYFLVADDM--MDQSKTRRGQPCWYLVEGVNNIAINDSFMLEGAIYILL--KKH 142 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQK------MKTGALM 189 + + +L L H + Q LG Q+LD+ DE I + F ++K KT Sbjct: 143 FRQDPYYVDLLDLFHEVTFQTELG-QLLDLITADEEIVDLDKFSLEKHSFIVIFKTAYYS 201 Query: 190 CFACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230 + + A+ +EK+ ++R LG FQ+ DD LDC Sbjct: 202 FYLPVALAMYMSGINDEKDLKQVRDILIPLGEYFQIQDDYLDC 244 >gi|332673082|gb|AEE69899.1| polyprenyl synthetase [Helicobacter pylori 83] Length = 307 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 L + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 VLNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S +L+ N L+ G +I+D F+ D+ + + I + KT Sbjct: 117 SK---------MGELIAKALSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLNFGMAFQIIDDLLDITQD 208 >gi|238882238|gb|EEQ45876.1| farnesyl pyrophosphate synthetase [Candida albicans WO-1] Length = 351 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 24/223 (10%) Query: 27 TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN---------VNHLTALRVGA 77 + +M + + + ++ Y GGK R V + ++ N + +G Sbjct: 27 VSYNMPQEAIEWFVRSLNYNTPGGKLNRGLSVVDTFAILNNTTSDKLNDTEYKKVALLGW 86 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIE + Y L+ DD+ MD RRG+P ++ I + +L A I+ K Sbjct: 87 AIELLQAYFLVADDM--MDQSKTRRGQPCWYLVEGVNNIAINDSFMLEGAIYILL--KKH 142 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQK------MKTGALM 189 + + +L L H + Q LG Q+LD+ DE I + F ++K KT Sbjct: 143 FRQDPYYVDLLDLFHEVTFQTELG-QLLDLITADEEIVDLDKFSLEKHSFIVIFKTAYYS 201 Query: 190 CFACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230 + + A+ +EK+ ++R LG FQ+ DD LDC Sbjct: 202 FYLPVALAMYMSGINDEKDLKQVRDILIPLGEYFQIQDDYLDC 244 >gi|222636085|gb|EEE66217.1| hypothetical protein OsJ_22362 [Oryza sativa Japonica Group] Length = 463 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 14/153 (9%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG +++ +++AG+ LL+ A +++ L Sbjct: 212 EMIHVASLLHDDV--LDDADTRRGVSSLNCIMGNKLSVLAGDFLLSRACVALAA----LG 265 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196 + LM + ++ ++ G+ + I + + +QK KT +L+ +C++ Sbjct: 266 NTEVVSLMAT-----AVEHLVTGETMQISTSREQRRSMDYYLQKTYYKTASLISNSCKAV 320 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AI+A + + +G NLG+ FQL DD+LD Sbjct: 321 AILAGHTADVSMLAYEYGRNLGLAFQLIDDVLD 353 >gi|242015532|ref|XP_002428407.1| farnesyl-pyrophosphate synthetase, putative [Pediculus humanus corporis] gi|212513019|gb|EEB15669.1| farnesyl-pyrophosphate synthetase, putative [Pediculus humanus corporis] Length = 403 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 22/207 (10%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMD 96 ++Y + GGKK R + L N +L + +G IE + LI DD+ MD Sbjct: 101 LQYNVPGGKKNRGLALVVTYKLLKKNVSKEEIYLAQI-MGWCIEILQAKLLIADDI--MD 157 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N RRG+P ++ +D T A N L + K KD +L L H++ L Sbjct: 158 NSLTRRGRPCWYLTHDLGTK--ALNDALLLGGSLFQVLKMYFKDKSYYINILELFHDVML 215 Query: 157 QGMLGGQM-----LDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKE- 208 + LG + LDI + T + +I K KT + F A M A ++ E Sbjct: 216 KTFLGQHLDTHTSLDISKDLNKFTMARYNLICKYKT-SYYSFVLPIAAAMFMAGIDDHEL 274 Query: 209 --RLRCFGENLGIIFQLADDLLDCEED 233 + + +G FQ+ DD LDC D Sbjct: 275 HRQAKTILLEMGHFFQVQDDYLDCFGD 301 >gi|119713712|gb|ABL97762.1| crtE geranylgeranyl diphosphate synthase [uncultured marine bacterium EB0_41B09] Length = 322 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 13/215 (6%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALR 74 D LD + + A + ND+ LSA + GK +R+ L L ++ T + Sbjct: 15 DQFLDKVKIDFAKSFEV--NDQFLSAWLSHHGESQGKWLRARLALATGGLLGISSQTYIN 72 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 E IH SL+HDD+ DN +RRG+ ++ ++ A+ G+ L+ +F I Sbjct: 73 WAVVCELIHSASLLHDDICDQDN--LRRGQTSLWKEFGIPAAVCTGDYLIAESFRKI--- 127 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFA 192 T++ ++L L + ++ ++ GQ DI + T Q + KT + Sbjct: 128 -TEIDQGWHQTILLKLL-SYSVKEIIFGQSKDISISPYEMTWDQYTKMATNKTAPFIALP 185 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 S+ E E L+ + LG+ +Q +DL Sbjct: 186 MMGMFNCNECSKAECEGLQESSDILGLSYQWLNDL 220 >gi|118469870|ref|YP_885527.1| bifunctional short chain isoprenyl diphosphate synthase [Mycobacterium smegmatis str. MC2 155] gi|118171157|gb|ABK72053.1| bifunctional short chain isoprenyl diphosphate synthase [Mycobacterium smegmatis str. MC2 155] Length = 329 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 16/182 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK+ R A L + V GA IE +H +L HDD+ MD +RRG + Sbjct: 49 GGKRFRPLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQMRRGAQSA 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ L A ++S D +R +++ T ++ GQM + Sbjct: 107 NARWGNNIAILAGDYLFATASRLVSRLG---PDAVR---VIADT----FAQLVTGQMRET 156 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + + +D ++ + KT L+ + GA + A+ + ERL G +G FQ+A Sbjct: 157 RGAADHVDSVDHYLKVVYEKTACLIAASGRFGATFSGANDEQIERLSRLGGIVGTAFQIA 216 Query: 225 DD 226 DD Sbjct: 217 DD 218 >gi|317177056|dbj|BAJ54845.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F16] Length = 307 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 24/168 (14%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 AL + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 ALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S +L+ N L+ G +I+D F+ D+ + + I + KT Sbjct: 117 SK---------MGELIAQALSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + +S AI+ + + FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL---SKDAKIYADFGLNFGMAFQIIDDLLDITQD 208 >gi|90580459|ref|ZP_01236265.1| Dimethylallyltransferase [Vibrio angustum S14] gi|90438368|gb|EAS63553.1| Dimethylallyltransferase [Vibrio angustum S14] Length = 298 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 11/196 (5%) Query: 40 LSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 LS +RY G + R+ + A +N TA + +E +H SLIHDD+ D Sbjct: 39 LSYLRYHQQSDGSQRRAKICYITAVSLGLNTNTAKLLAVTVELLHNASLIHDDVQDKDQK 98 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 RRG+ + ++ AI G+ L+ A+ +S T ++++ + + I Sbjct: 99 --RRGQDALWVKASVEEAICLGDTLIVAAYHALSKINTPANSHLQATVCRRVMETI---- 152 Query: 159 MLGGQMLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQM D+ + + E +I K L+ + E A++A K L + Sbjct: 153 --RGQMDDLSPQLPLTEQSYTLIATNKAAPLLSLSVELPALLAGEPSLAKA-LSNAASSF 209 Query: 218 GIIFQLADDLLDCEED 233 + +Q DDL D +D Sbjct: 210 ALAYQFYDDLCDQAQD 225 >gi|22296798|gb|AAM94362.1| geranylgeranyl pyrophosphate synthase [Agromyces mediolanus] Length = 369 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 47/266 (17%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 PS+ E + + DD +++ +H RL +A R A GGK+IR LV Sbjct: 10 PSRQAEVERYLGGFFDDAIVRADAHAADYR--RLWAAARDAASGGKRIRPRLVLGAYDAL 67 Query: 66 NVNHLTA----------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 A + + AA E +H L+HDD+ +D +RRG+P V Sbjct: 68 AAQGAPASGRERADAEPAAAAEAVALAAAFELLHTAFLVHDDV--IDRDLVRRGEPNVAG 125 Query: 110 Q-----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 + Y + +AI+AG+ LL A +++ T + + SLT Sbjct: 126 RFALDAALRGLERERADAYGQASAILAGD-LLIAAAHSVAAAST-CRSSAGEPSSPSLTK 183 Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFAC--ESGAIMAHASQNEK 207 + G+ D++ E + + + KT A F+ +GA++A A + Sbjct: 184 CV--FAAAAGEHADVRHAAGVRPGEADILAMIEDKT-ACYSFSAPLRAGALLAGAPRATV 240 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 ERL G LG+ FQL DD+L D Sbjct: 241 ERLGEIGRRLGVAFQLQDDVLGVYGD 266 >gi|302557478|ref|ZP_07309820.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000] gi|302475096|gb|EFL38189.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000] Length = 360 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 80/208 (38%), Gaps = 29/208 (13%) Query: 45 YALLGGKKIRSFL-----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 Y L GGK++R + + LR A E +H LIHDD+ +D Sbjct: 45 YVLRGGKRVRPTFAWLGWIGAGGDPDDPVAPAVLRACAGFELLHASGLIHDDI--IDASR 102 Query: 100 IRRGKPTVHIQYDE----------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRS--QLM 147 RRG P H+ + E A AG +L ++ S + + Q Sbjct: 103 TRRGHPAAHVVFAERHRMRRFSGDPGAFGAGAAILVGDLALVWSDVMVRASGLPADAQTR 162 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQ 204 L + ++ GQ+LD+ + DE V ++ + KT + E A Sbjct: 163 LGPVWSAVRYEVMYGQLLDLISQASDEEGVDAALLVDQYKTA---SYTVERPLQFGAAIA 219 Query: 205 NEKERL----RCFGENLGIIFQLADDLL 228 L R FG ++GI FQL DDLL Sbjct: 220 GADAGLVDAYRAFGADIGIAFQLRDDLL 247 >gi|302538600|ref|ZP_07290942.1| predicted protein [Streptomyces sp. C] gi|302447495|gb|EFL19311.1| predicted protein [Streptomyces sp. C] Length = 355 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 15/205 (7%) Query: 38 RLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSM 95 R L +R +L GGK++R L+ E A+L + L L A +IE + + LIHDD+ + Sbjct: 41 RALDLVRDMSLRGGKRLRVVLLYEAAALVADDGLAGLDEAAISIELLQTHGLIHDDI--I 98 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS------QLMLS 149 D+ +RRG P+ + Y L + L+ + S L ++ Sbjct: 99 DDAPVRRGGPSTYYAYRHEFPDQPDTALALALLAGDLAAFLSLRVLLTSGLPADRALAMA 158 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNE 206 H + GQM+D++ +F + + + K+ A ++A + + Sbjct: 159 AVHADTGAATMTGQMIDLERDFHPAPGIDFLHAVTEFKSTRYSVLAPLRMGLLAAGADHT 218 Query: 207 K--ERLRCFGENLGIIFQLADDLLD 229 LR + LGI Q+ DD LD Sbjct: 219 PYDAELRRYATALGIANQIHDDWLD 243 >gi|119478047|ref|ZP_01618126.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [marine gamma proteobacterium HTCC2143] gi|119448753|gb|EAW29996.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [marine gamma proteobacterium HTCC2143] Length = 208 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 LM +T+ I +L Q+ D E Q F + KT L A GAI+A Q Sbjct: 20 LMADVTNTIAEGEVL--QLTKAGDPDTTEDQYFQVITNKTAVLFAAATAGGAILAQQDQT 77 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231 + +G NLGI FQL DD+LD E Sbjct: 78 TVDNYYQYGLNLGIAFQLIDDVLDYE 103 >gi|289759542|ref|ZP_06518920.1| predicted protein [Mycobacterium tuberculosis T85] gi|289715106|gb|EFD79118.1| predicted protein [Mycobacterium tuberculosis T85] Length = 230 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 24/206 (11%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 + I+++ + L H+ + DR +A GK R+ LV A+ + A Sbjct: 41 RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 96 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+ L A I+ Sbjct: 97 PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL-- 152 Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 T L D IR M L IG +L GQ D+++ + KT Sbjct: 153 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 204 Query: 186 GALMCFACESGAIMAHASQNEKERLR 211 AL C GA++A+A E R Sbjct: 205 AALTGCCCALGALVANADDATIEPPR 230 >gi|169846410|ref|XP_001829920.1| farnesyltranstransferase [Coprinopsis cinerea okayama7#130] gi|116508947|gb|EAU91842.1| farnesyltranstransferase [Coprinopsis cinerea okayama7#130] Length = 325 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 17/189 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IR L+ NV + + +H SL+ DD+ D+ +RRG P H Sbjct: 37 GKEIRGKLIDAFNLWLNVPDDKLQVIAKIVNMLHAASLMVDDI--EDDSQLRRGNPVAHK 94 Query: 110 QYDEVTAIIAGNGLLTYAFEII------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 Y I + N + AF+ + +P Q D + +Q +LSL GL+ + Sbjct: 95 IYGIPQTINSANYVYFLAFQELFALRNGPTPPRQDIDQMVTQELLSLHRGQGLEILWRDS 154 Query: 164 M-LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + ++++ID M+ KTG L+ + +MA ++ N G+ FQ Sbjct: 155 LQCPTEEQYID-----MVSN-KTGGLLRLGIK--LMMACSTTNSDVDYTPLVSLFGVYFQ 206 Query: 223 LADDLLDCE 231 + DDL++ + Sbjct: 207 IRDDLMNLQ 215 >gi|255513478|gb|EET89744.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 340 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 16/194 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 G R L+ +F +++ AA + + LI DD +MD+ RRG PT+H Sbjct: 42 GNYRRPILLMLTGEMFGAPIEKLVQLAAAQQLSEEWLLIQDD--AMDDSEFRRGGPTLHK 99 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 Y + AI A + + ++I+ + D + +++ ++ + GQ I++ Sbjct: 100 MYGWIHAINASDTINVTMWKILKDYIMKF-DPKNGNAIYDKFYDM-IKYTIEGQY--IEN 155 Query: 170 EFIDETQ---------VFMIQKMKTGALMCFA-CESGAIMAHASQNEKERLRCFGENLGI 219 +FI+ T+ F I KT + + GA+ A A + + G N GI Sbjct: 156 KFINNTKDLSKASESMYFRIADGKTCYYTIYGPMQIGAMAAGAPEKAISAFKEIGTNTGI 215 Query: 220 IFQLADDLLDCEED 233 FQ+ DD+LD D Sbjct: 216 AFQIMDDILDMAGD 229 >gi|41408009|ref|NP_960845.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396364|gb|AAS04228.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 348 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 43/174 (24%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTY 126 H +L+HDD+ +D+ RRG+PT H+++ + AI+ G+ L + Sbjct: 77 HACALVHDDV--IDDSATRRGRPTTHVRFASLHRDRQWQGSPERFGMSAAILLGDLALAW 134 Query: 127 AFEIIS----SPKT-----QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 A +I+ +P+ ++ NIR++ +LGGQ LDI E + Sbjct: 135 ADDIVLGVDLTPQAARRVRRVWANIRTE-------------VLGGQYLDIVAEASAAASI 181 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKER---LRCFGENLGIIFQLADDLL 228 + T C+ + A+ + + FG +LG+ FQL DD+L Sbjct: 182 ASAMNVDTFKTACYTVSRPLQLGAAAADRPDVHDLFSQFGTDLGVAFQLRDDVL 235 >gi|115469526|ref|NP_001058362.1| Os06g0678200 [Oryza sativa Japonica Group] gi|52076633|dbj|BAD45534.1| putative geranyl diphosphate synthase [Oryza sativa Japonica Group] gi|52076919|dbj|BAD45931.1| putative geranyl diphosphat synthase [Oryza sativa Japonica Group] gi|113596402|dbj|BAF20276.1| Os06g0678200 [Oryza sativa Japonica Group] gi|125556476|gb|EAZ02082.1| hypothetical protein OsI_24162 [Oryza sativa Indica Group] gi|215765303|dbj|BAG87000.1| unnamed protein product [Oryza sativa Japonica Group] Length = 430 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 14/153 (9%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG +++ +++AG+ LL+ A +++ L Sbjct: 179 EMIHVASLLHDDV--LDDADTRRGVSSLNCIMGNKLSVLAGDFLLSRACVALAA----LG 232 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196 + LM + ++ ++ G+ + I + + +QK KT +L+ +C++ Sbjct: 233 NTEVVSLMAT-----AVEHLVTGETMQISTSREQRRSMDYYLQKTYYKTASLISNSCKAV 287 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AI+A + + +G NLG+ FQL DD+LD Sbjct: 288 AILAGHTADVSMLAYEYGRNLGLAFQLIDDVLD 320 >gi|291516753|emb|CBK70369.1| Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum subsp. longum F8] Length = 360 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L + + +T R A AIE +L+HDD+ +D +RR Sbjct: 52 GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 108 Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152 G+P+ H ++ AI G GL+ T EI ++L + + ++ L++ Sbjct: 109 GRPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITCRSASRLPNTDALNEAFLTMQR 168 Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 + + GQ+LD+ E + + KT + A A++A Sbjct: 169 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 223 Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229 ++ R G LG+ FQLADDLLD Sbjct: 224 DQARHCALAVGRPLGLAFQLADDLLD 249 >gi|215447707|ref|ZP_03434459.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T85] gi|294995846|ref|ZP_06801537.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 210] Length = 193 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 24/206 (11%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 + I+++ + L H+ + DR +A GK R+ LV A+ + A Sbjct: 4 RAIESMREPLATMAGYHLGWWNADRSTAAGS----SGKYFRAALVYAAAAACGGDVGDAT 59 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+ L A I+ Sbjct: 60 PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL-- 115 Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 T L D IR M L IG +L GQ D+++ + KT Sbjct: 116 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 167 Query: 186 GALMCFACESGAIMAHASQNEKERLR 211 AL C GA++A+A E R Sbjct: 168 AALTGCCCALGALVANADDATIEPPR 193 >gi|183983209|ref|YP_001851500.1| polyprenyl synthetase IdsB_1 [Mycobacterium marinum M] gi|183176535|gb|ACC41645.1| polyprenyl synthetase IdsB_1 [Mycobacterium marinum M] Length = 345 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 10/152 (6%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H +SL+HDD+ MD RRG+ TV + E AI+ G+ L A ++ L+ Sbjct: 94 ELMHNFSLVHDDV--MDRDATRRGRATVWAVWGETNAIVLGDALHALAGRVLVE---MLE 148 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESG 196 + + ++ L + + GQ D E + V +M KT LM AC G Sbjct: 149 PEVAANAVMRLESSC--VTLCDGQFEDCDFETRESVSVDGYLEMAAGKTAGLMGCACALG 206 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A+ A+A + FG LG+ FQ+ DD++ Sbjct: 207 ALAANADPATVTAMHQFGFQLGLAFQIVDDVM 238 >gi|256377875|ref|YP_003101535.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827] gi|255922178|gb|ACU37689.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827] Length = 361 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 43/210 (20%) Query: 50 GKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GK++R C L T +R A+E + +L+HDD+ MD RRG Sbjct: 52 GKRVRPIFAW-CGWLAAGGAETGPESDAVVRALVALELLQVCALVHDDV--MDRSTTRRG 108 Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 + H+ Y + A++ G+ L ++ + I + + R+ + Sbjct: 109 RAAAHVAFAARHRRLRWSGDPKHYGDCAAVLVGDLALAWSDDAIVTAGLEPAALSRAWVA 168 Query: 148 LSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACES----GAI 198 M+ GQ LD+ ++E ++ Q + +KT A + E GA Sbjct: 169 WQAMR----VEMMAGQHLDLLAGARREESLE--QALRVAALKTAA---YTVERPLHLGAA 219 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLL 228 MA A E LR FG ++G+ FQL DDLL Sbjct: 220 MAGAGPELVEALRSFGRDIGVAFQLRDDLL 249 >gi|226372050|gb|ACO51650.1| Geranylgeranyl pyrophosphate synthetase [Rana catesbeiana] Length = 299 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 83/193 (43%), Gaps = 20/193 (10%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK+IR+ L NV + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQIRTKLSQAFNHWLNVPEDKTQVIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + N+ +Q +L L Sbjct: 70 SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLNHPDAVNVFTQQLLELHR----- 124 Query: 158 GMLGGQMLDI--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GQ LDI +D + ET+ + KTG L A +M S ++K+ L+ Sbjct: 125 ----GQGLDIYWRDTYTCPTETEYKSMVLQKTGGLFGLAV---GLMQLFSSSKKD-LKPL 176 Query: 214 GENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 177 LNTLGLFFQIRDD 189 >gi|15805956|ref|NP_294656.1| polyprenyl synthase [Deinococcus radiodurans R1] gi|6458656|gb|AAF10509.1|AE001946_1 polyprenyl synthase [Deinococcus radiodurans R1] Length = 320 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 28/196 (14%) Query: 49 GGKKIRSFLVTECASLFNV---------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 GGK++R + A + LR+ +E +H SL+HDDL +D+ Sbjct: 32 GGKRVRPLVTLLAAQALGAGPDALATSHSWDELLRLSVCVELLHSASLLHDDL--IDDSD 89 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 RRG+ T ++ V ++++G+ +L E+ P + +LT G Sbjct: 90 KRRGQETAFRRFGNVVSVMSGDFMLARLLGELSGMPGSP-----------ALTRAFGQAA 138 Query: 159 ML--GGQMLDIQ-DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + G++L Q + D + F + KT AL+ A ++ A++ A + ++ L F Sbjct: 139 SVICEGEVLQFQVASYADYSFENYFQVIHGKTAALLELAAQAPAMLLGADDSARDALSTF 198 Query: 214 GENLGIIFQLADDLLD 229 G G+ FQ+ DDLLD Sbjct: 199 GREYGMAFQMQDDLLD 214 >gi|240171554|ref|ZP_04750213.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium kansasii ATCC 12478] Length = 370 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 26/166 (15%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTY 126 H ++L+ DD+ MD RRG P VH+Q + E AI+ G+ L + Sbjct: 100 HAFALLQDDV--MDRSSQRRGSPAVHVQLAEWYRLRGLSGPAGRFGESAAILLGDVCLIW 157 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKM 183 A +++ + + R Q + + ++ + GQ D+ ++ D V I + Sbjct: 158 AEQMLRESGVEAR---RLQQLWPRYDAMRIE-LAVGQFADLANDIRDRPSLRTVLDIARR 213 Query: 184 KTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 K+G E GA MA +L +G ++G FQL DDLL Sbjct: 214 KSGNYTVRRPLEMGAAMADCDDRTLTQLGLYGADVGEAFQLRDDLL 259 >gi|297197031|ref|ZP_06914428.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083] gi|197715682|gb|EDY59716.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083] Length = 351 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 33/205 (16%) Query: 46 ALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 A+ GK++R+ + A + + L +R A++E +H +++HDDL +D+ +R Sbjct: 47 AVADGKRLRAAFCYWGWRAAGQPDSDAL--VRAAASMELVHAAAVVHDDL--IDDSPLRH 102 Query: 103 GKPTVHIQYDEVT-------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 G+PT H+ A++ G+ L++ A ++ ++ R++ + S Sbjct: 103 GRPTAHVALRGAVHGRPRAVSAARSLAMLVGDLLMSLAGQMFATSGLPAAYLARARPLWS 162 Query: 150 LTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHAS 203 + + ++ G+ L+I D + + KT + E G +A A Sbjct: 163 VL----ARELIAGECLEILRTGTVPDTATSLKVIRYKTAK---YTVEQPLLIGGTLAGAG 215 Query: 204 QNEKERLRCFGENLGIIFQLADDLL 228 + +E +G LG FQL DDLL Sbjct: 216 ERLREGYSAYGLPLGEAFQLRDDLL 240 >gi|329946884|ref|ZP_08294296.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386] gi|328526695|gb|EGF53708.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386] Length = 386 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 107/275 (38%), Gaps = 58/275 (21%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFL-VTEC 61 LP+ L ++ L+++L + Q LL A L GGK++R+ L C Sbjct: 4 LPAALSRVRPAVEHRLEEVLAGCHRRWEELEQAAPELLKAADSVLGGGKRMRAVLGAVGC 63 Query: 62 ASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH--IQYD 112 L H +A+ +GAA+E +L+HDDL MD RRG P H ++ Sbjct: 64 TILSAPEHRNKELTGASAVHLGAALELYQASALVHDDL--MDGASTRRGLPAAHHAFAWE 121 Query: 113 EVTAIIAG-------NGLLTYAFEIISSPKTQLKDNIRSQLML---------------SL 150 T G NG + ++S ++ ++ ++ Sbjct: 122 HETRGWLGHSRAFGSNGAILLGDLLLSLAGEEMSALAQAHTSSGCGDEAVGHARAAFDAM 181 Query: 151 THNIGLQGMLGGQMLDIQDEFID----ETQVFMIQKMKTGALMCFACES----------- 195 T + L GQ LD++ E + + Q+M+ AL +S Sbjct: 182 TTEVAL-----GQYLDVRSENLPLPWGQDPAAAAQRMRDDALSVVRHKSARYSVRHPLLI 236 Query: 196 GAIMA--HASQNEKERLRCFGENLGIIFQLADDLL 228 GA++A S + L FGE +GI FQL DD L Sbjct: 237 GALLAGMAPSSPTAKHLAEFGEEIGIAFQLRDDEL 271 >gi|229817447|ref|ZP_04447729.1| hypothetical protein BIFANG_02710 [Bifidobacterium angulatum DSM 20098] gi|229785236|gb|EEP21350.1| hypothetical protein BIFANG_02710 [Bifidobacterium angulatum DSM 20098] Length = 359 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 29/203 (14%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R+ L+ F+ + T L V A+E +L+HDD+ +D+ +RRGKP Sbjct: 52 GGKRLRALLMLAAYDAFDGHADTRNAMLDVACALEVFQTAALVHDDI--IDDSDLRRGKP 109 Query: 106 TVH--IQYDEVTAIIAGNGLL-------TYAFEIISSPKTQLKDNIR-SQLMLSLTHNIG 155 + H ++ D + I L T +I++ L + L++ + Sbjct: 110 SAHRALETDTGSPAIGRGLGLMLGDLLATVCIDIVNEAAALLPHATALTSAFLNMQREVE 169 Query: 156 LQGMLGGQMLDI-------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNE 206 + GQ+LD+ QD + + KT + A A++ A Sbjct: 170 I-----GQILDLAVEQAPLQDAEALANASLNVFRWKTASYTTIAPIELALLGSGAAPGQA 224 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 +ER G+ LG+ FQL DDL+D Sbjct: 225 RERALAIGKPLGLAFQLEDDLID 247 >gi|62752853|ref|NP_001015867.1| farnesyl diphosphate synthase [Xenopus (Silurana) tropicalis] gi|59861885|gb|AAH90384.1| MGC108224 protein [Xenopus (Silurana) tropicalis] gi|124504226|gb|AAI28626.1| MGC108224 protein [Xenopus (Silurana) tropicalis] Length = 348 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 72/254 (28%), Positives = 98/254 (38%), Gaps = 29/254 (11%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVT 59 MN S+ QE S + I+ DL + + H + RL + Y GGK R VT Sbjct: 1 MNSHAGSERQEFSSYFEQIVQDLTAEDSGHPEVGDAITRLKEVLEYNTPGGKCNRG--VT 58 Query: 60 ECASLFNV---------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110 AS + N AL VG +E + + L+ DD+ MDN RRG+P + + Sbjct: 59 VLASYKELVGPELHKDGNLQRALAVGWCVELLQAFFLVADDI--MDNSVTRRGQPCWYRK 116 Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--- 167 E + A N I + + +L L Q LG Q LD+ Sbjct: 117 --EGVGLDAVNDSFLLEASIYRILRKYCRGKPYYLSLLELFLETSYQTELG-QALDLITA 173 Query: 168 QDEFID-----ETQVFMIQKMKTGALMCFACESGAIMAHAS---QNEKERLRCFGENLGI 219 Q +D E + I K KT A F A M A + E R +G Sbjct: 174 QPGKVDLNRYTEKRYKAIVKYKT-AFYSFYLPVAAAMYMAGIAGEAEHTNARTILLEMGE 232 Query: 220 IFQLADDLLDCEED 233 FQ+ DD LDC D Sbjct: 233 FFQIQDDYLDCYGD 246 >gi|304321515|ref|YP_003855158.1| polyprenyl synthetase family protein [Parvularcula bermudensis HTCC2503] gi|303300417|gb|ADM10016.1| polyprenyl synthetase family protein [Parvularcula bermudensis HTCC2503] Length = 317 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 8/181 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A L + A+E IH +L+HDD+ +D +RRG T + Sbjct: 35 GGKRLRPLMTLAAAELCGETGEGPRLLAGAVELIHAATLLHDDV--VDESALRRGLRTAN 92 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + +++ G+ L AFE++ +I +LS I +G + Q+ Q Sbjct: 93 IVFGNKESVLVGDFLFARAFELMVR-----TGSIEVLGILSKASCIIAEGEVL-QLTTSQ 146 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + +T + KT AL A E+GA++A + +R +G N GI +QL DD L Sbjct: 147 NLETPQTIYLDVISAKTAALFAAAAEAGAVVAGGDAEKVAAMRAYGLNFGIAYQLVDDAL 206 Query: 229 D 229 D Sbjct: 207 D 207 >gi|307103628|gb|EFN51886.1| hypothetical protein CHLNCDRAFT_49140 [Chlorella variabilis] Length = 312 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 14/158 (8%) Query: 49 GGKKIRSFLVTECA-SLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R +V A + F + L+ + R+ E +H SL+HDD+ +D +RR Sbjct: 41 GGKRLRPLIVLLVARATFPLTGLSDITERHRRLAEISEMLHTASLVHDDV--LDECDVRR 98 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ Y A++AG+ L + +++ DN+ ++S G + Sbjct: 99 GKETVNSLYGTRVAVLAGDFLFAQSSWFLAN-----LDNMEVIKLISQVIADFADGEI-S 152 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 Q + D +ID + KT +L+ +C S A+ + Sbjct: 153 QAASLFDAYIDLRRYLDKSFWKTASLIAASCRSAAVFS 190 >gi|227538590|ref|ZP_03968639.1| possible trans-hexaprenyltranstransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227241509|gb|EEI91524.1| possible trans-hexaprenyltranstransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 201 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 14/167 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R V A L + + R + +E +H SL+HDD+ +DN RRG +V+ Sbjct: 45 GKQMRPMFVFFSAGLCGSINESTFRGASLVELLHTASLVHDDV--VDNANERRGFFSVNA 102 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + A++ G+ LL+ ++S DN L+ ++ ++ M G++L I+ Sbjct: 103 LWKNKVAVLVGDFLLSKGL-LLSV------DNNDFHLLKIVSE--AVEQMSEGELLQIEK 153 Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 I+E+ F + + KT +L+ C GA ++ CF Sbjct: 154 ARKLDIEESVYFEVIRQKTASLIASCCACGAASTDVDARNCKKNACF 200 >gi|50955185|ref|YP_062473.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951667|gb|AAT89368.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 371 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 31/216 (14%) Query: 38 RLLSAIRYALLGGKKIRS-FLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPS 94 RL + R A GGK++R FL++ L + A+R A E +H L+HDDL Sbjct: 54 RLWESARDAAEGGKRLRPRFLLSAFHGLGAPDDRREDAIRTAVAFELLHTAFLLHDDL-- 111 Query: 95 MDNGYIRRGKPTVHIQY---------DEVTAIIAGNGLLTYAFEIISS------PKTQLK 139 +D +RRG+P V ++ D A + G A +++ + Sbjct: 112 IDGDTVRRGRPNVAGEFSADALFRGADAPLATVWGESAALLAGDLLLHAASDQLARLDAP 171 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI------QDEFIDETQVFMIQKMKTGAL-MCFA 192 +RS+L+ +L + + G++ D+ I + V + + KT A + Sbjct: 172 AGVRSRLLDALDRAVFVTAA--GELADVGLATGMTARGIPD--VLAMTEHKTAAYSVSGP 227 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +GA++A AS + L +G +G FQL DDLL Sbjct: 228 LTAGALLAGASDGLLDVLAHYGRLVGAAFQLGDDLL 263 >gi|156554759|ref|XP_001605679.1| PREDICTED: similar to ENSANGP00000021639 [Nasonia vitripennis] Length = 314 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 16/196 (8%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +++LL Y L + GK+IR L + VG + +H SL+ DD+ Sbjct: 17 EQDEKLLQPFTYILQVPGKQIRGKLAHAFNYWLKIPVEKLQAVGDITQMLHNSSLLIDDI 76 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 DN +RRG P H Y + I A N +L A E + S + ++ +L L Sbjct: 77 --QDNSILRRGIPVAHSIYGVASTINAANYVLFIALERVISLNHPEATQVYTEQLLELHR 134 Query: 153 NIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G++ + +D FI E + + KTG L A + + KE Sbjct: 135 GQGME-------IYWRDNFICPSEAEYRTMTIRKTGGLFNLAVRLMQLFSDC----KEDF 183 Query: 211 RCFGENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 184 TPLAGILGLYFQIRDD 199 >gi|261337603|ref|ZP_05965487.1| probably short chain isoprenyl diphosphate synthase [Bifidobacterium gallicum DSM 20093] gi|270278026|gb|EFA23880.1| probably short chain isoprenyl diphosphate synthase [Bifidobacterium gallicum DSM 20093] Length = 385 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 44/218 (20%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA----------------LRVGAAIECIHCYSLIHDDL 92 GGK++R+ L+ E + T L + AIE +L+HDD+ Sbjct: 66 GGKRLRALLLLETYRVMEPTQPTPASDQTPTNQARIKQSVLDLACAIELFQTAALVHDDI 125 Query: 93 PSMDNGYIRRGKPTVHIQYDEV---------TAIIAGNGLLTYAFEIISSPKTQLKD-NI 142 +D+ +RRGKP H I+ G+ L T + S L D N Sbjct: 126 --IDDADLRRGKPAAHRALANAGGTLSTGIGLGIMLGDLLATACSVVASEASHALPDPNA 183 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM-----IQKMKTGALMCFACES 195 + + + + + GQ+LD+ E +D+ Q + + KT + Sbjct: 184 IERAFMRMQQEVEI-----GQVLDLAIERMSLDDAQALADASLNVFRWKTASYTTITPLL 238 Query: 196 GAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDC 230 A++A A E E LR G LGI FQ+ADDL+D Sbjct: 239 LAMLA-AGMPEDEALRHAIDIGLPLGIAFQIADDLIDV 275 >gi|25452945|sp|O24241|FPPS1_PARAR RecName: Full=Farnesyl pyrophosphate synthase 1; Short=FPP synthase 1; Short=FPS 1; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1; AltName: Full=Dimethylallyltranstransferase 1; AltName: Full=Farnesyl diphosphate synthase 1; AltName: Full=Geranyltranstransferase 1 gi|1532050|emb|CAA57892.1| farnesyl diphosphate synthase [Parthenium argentatum] Length = 342 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 28/233 (12%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71 DT+ +L+ A + + Y + GGK R V + L LT Sbjct: 14 DTLKSELINDPAFEFDDDSRQWVEKMLDYNVPGGKLNRGLSVIDSYQLLKGGELTDNEIF 73 Query: 72 -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A +G IE + Y L+ DD+ MD + RRG+P + +V I A +G++ Sbjct: 74 LAAALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLPKVGMIAANDGIILRN--- 127 Query: 131 ISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM------- 179 + P+ LK + R + +L L + + Q GQM+D+ + E + Sbjct: 128 -NVPRI-LKKHFRGKPYYVDLLDLFNEVEFQ-TASGQMIDLITTLVGEKDLSKYSLSIHR 184 Query: 180 -IQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDC 230 I + KT + + A++ EK E ++ +G FQ+ DD LDC Sbjct: 185 RIVQYKTAYYSFYLPVACALLMFGEDLEKHEEVKNVLVEMGTYFQVQDDYLDC 237 >gi|242078453|ref|XP_002443995.1| hypothetical protein SORBIDRAFT_07g005530 [Sorghum bicolor] gi|241940345|gb|EES13490.1| hypothetical protein SORBIDRAFT_07g005530 [Sorghum bicolor] Length = 365 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 15/166 (9%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +RV E IH SLIHDD+ +DN RRG +++ + A++AG+ LL AF Sbjct: 137 MRVAEITEMIHISSLIHDDV--LDNADTRRGMDSLNFTVGKKLAVLAGDFLLFRAF---- 190 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMC 190 S L + L+ + +N+ ++ + Q +D + +QK KT AL+ Sbjct: 191 SAAVALDNTEVVSLLATAVNNLVTGELMQLTITPAQRCSMD----YYLQKTYYKTAALIS 246 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +C++ A+++ + + +G +LGI+ +L E+ P+ Sbjct: 247 NSCKAIAVLSGQTTEVQALAYQYGRHLGIV---TAPVLFAMEEFPQ 289 >gi|226356385|ref|YP_002786125.1| polyprenyl synthetase [Deinococcus deserti VCD115] Length = 341 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 82/201 (40%), Gaps = 34/201 (16%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGY 99 Y GGK IRS L+ A V H T A + A +E + LIHDD+ D+ Sbjct: 44 YPQRGGKGIRSELLLASAQAHGVAHDTDAWDQAQWLAAGLELFQNWVLIHDDI--QDDSE 101 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRG+P +H Y AI G+ L Y + + + + + L++ H Sbjct: 102 ERRGQPALHRLYGVPLAINVGDALHAYMWAAVH--RAGVPGAMEE--FLTMIHRTA---- 153 Query: 160 LGGQMLDI-----QDEFIDETQVFMIQKMKTG------ALMCFACESGAIMAHASQNEKE 208 GQ LD+ ++ + E + ++KT L A +G A A N Sbjct: 154 -EGQHLDLSWVEHREWKLREADYLEMVQLKTAHYTVIVPLRLGALAAGVQPASAFTNA-- 210 Query: 209 RLRCFGENLGIIFQLADDLLD 229 G LG FQ+ DD+L+ Sbjct: 211 -----GLALGSAFQIRDDVLN 226 >gi|297243593|ref|ZP_06927524.1| bifunctional short chain isoprenyl diphosphate synthase [Gardnerella vaginalis AMD] gi|296888344|gb|EFH27085.1| bifunctional short chain isoprenyl diphosphate synthase [Gardnerella vaginalis AMD] Length = 368 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 43/250 (17%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTEC-------A 62 S++ +T L+D L T + Q I+ A++ GGK +R+ L Sbjct: 23 SQQFNTGLEDNLSSTCAQTLQQ-------VIKQAIVSSEGGKLLRALLTISAFYAASKET 75 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE------VTA 116 ++ ++ + + A+E +LIHDD+ +D Y+RRGKP+ + + + Sbjct: 76 NIQKIHEQSVFDIACALEVFQTAALIHDDI--IDESYLRRGKPSAYCALSKACNNKHIGT 133 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDIQDEFI 172 + A E + K+ + +L S+ N+G+ GQ+LD+ E + Sbjct: 134 GLGLMLGDLLATESFDIARNCAKNFTYGEELLAAFASMQRNVGI-----GQVLDLSIEMM 188 Query: 173 D-------ETQVFMIQKMKTGALMCFACES-GAIMAHASQNEKERL-RCFGENLGIIFQL 223 + + KT + A + G + A+ E L G +LG+ FQ+ Sbjct: 189 QLDNPIQLAESSLNVFRWKTASYTTVAPLTLGFLAANMQPTEAYNLANSIGNSLGVAFQI 248 Query: 224 ADDLLDCEED 233 ADDLLD D Sbjct: 249 ADDLLDIVSD 258 >gi|146413673|ref|XP_001482807.1| hypothetical protein PGUG_04762 [Meyerozyma guilliermondii ATCC 6260] Length = 329 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%) Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 NH T + I H SL+ DD+ D RRG P H +Y + GN + A Sbjct: 53 NHDTIATISEVITVFHNSSLLIDDIE--DGSEFRRGLPAAHTKYGVALTLNCGNLMYFVA 110 Query: 128 FEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLG---GQMLDIQ-DEFIDETQVFMIQ 181 + P+ DN ++ + LS+ NI ++ +L GQ LDI + + T++ +I+ Sbjct: 111 LQTAQQKLPQYHPSDN-KNDIALSIL-NILVEELLNLHHGQGLDIHWRDHLKTTKLPLIE 168 Query: 182 KM------KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTG L A + + A ++ ++ + GI+FQ+ DDL++ +D Sbjct: 169 EYMEMIMNKTGGLFRLAVK--LLGAFSTPQDEPTVLAIANLFGIVFQIRDDLMNLVDD 224 >gi|163795411|ref|ZP_02189378.1| geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] gi|159179397|gb|EDP63928.1| geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] Length = 294 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 3/109 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GG ++R+ + + S ++ + + + E +H SL+HDDL D +RR P++ Sbjct: 50 GGSRVRARIALQAGSALGLSQTICVALASGCELLHNASLVHDDLQDRDG--MRRNAPSMW 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 + + E AI AG+ +L+ A+ ++ + I + + L + H I Q Sbjct: 108 LAHGEAIAICAGDLMLSSAYAALAQAGPKAASMI-THVHLRVAHVISGQ 155 >gi|145222438|ref|YP_001133116.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK] gi|315442885|ref|YP_004075764.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] gi|145214924|gb|ABP44328.1| Polyprenyl synthetase [Mycobacterium gilvum PYR-GCK] gi|315261188|gb|ADT97929.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1] Length = 371 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 44/186 (23%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVT 115 A+R A++E +H ++L+ DD+ MD +RRG+PT H ++ E Sbjct: 90 AIRAAASLEFLHAFALMQDDV--MDESPMRRGRPTAHRAFANWHHANGLSGSSTRFGESA 147 Query: 116 AIIAGNGLLTYAFEIISSPKTQLK---------DNIRSQLMLSLTHNIGLQGMLGGQMLD 166 A++ + L +A +++ D +R++L + GQ D Sbjct: 148 AVLLADLCLVWAEQMLRESGVDAAALDRAWPRYDTMRTELAV-------------GQFAD 194 Query: 167 IQDE---FIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 + ++ F V + + K+G E GA +A + + L +G +G FQ Sbjct: 195 LVNDTATFPSLDAVLDVARRKSGNYTVRRPLEIGATLAGCDERQLSALAGYGSAVGEAFQ 254 Query: 223 LADDLL 228 + DDLL Sbjct: 255 MRDDLL 260 >gi|15611295|ref|NP_222946.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori J99] gi|4154736|gb|AAD05797.1| putative OCTAPRENYL-DIPHOSPHATE SYNTHASE [Helicobacter pylori J99] Length = 307 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 AL + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 ALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + + S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIAQAL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG + G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLHFGMAFQIIDDLLDITQD 208 >gi|42523219|ref|NP_968599.1| putative octaprenyl-diphosphate synthase [Bdellovibrio bacteriovorus HD100] gi|39575424|emb|CAE79592.1| putative octaprenyl-diphosphate synthase [Bdellovibrio bacteriovorus HD100] Length = 329 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 13/155 (8%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E IH SLI DD+ D+ RRG PT H Y A+ GN + FE + Sbjct: 73 LEWIHAGSLIVDDI--QDDSLERRGGPTAHRLYGVGPALNLGNWMY---FEALKGLHALP 127 Query: 139 KDNIRSQLMLSLTH------NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 D+ ++S H ++G LG M + E I E V +K+GAL+ A Sbjct: 128 VDDSVKLKIISCAHEAMHQAHLGQALDLGANMKTLSAEQIQEV-VHKSHSLKSGALVALA 186 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + GA++ A Q + + L+ G LG Q DDL Sbjct: 187 MQVGALIGDA-QADLQLLQELGMQLGSSLQRFDDL 220 >gi|162538563|gb|ABY19313.1| farnesyl diphosphate synthase 2 [Myzus persicae] gi|168831500|gb|ACA35007.1| putative mitochondrial isoprenyl diphosphate synthase precursor [Myzus persicae] gi|169139042|gb|ACA48700.1| farnesyl diphosphate synthase 2 [Myzus persicae] Length = 396 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 25/207 (12%) Query: 43 IRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSM 95 ++Y + GGK R LV+ L + ++LT + +G +E + Y L+ DDL M Sbjct: 91 LQYNVPGGKNNRGLILVSSFKMLSSPSYLTDENLRLSYILGWCVEILQAYQLVMDDL--M 148 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN RRG+P + ++++V + +G+L I K KD +L L +++ Sbjct: 149 DNAITRRGRPCWY-RHNDVGLMAVNDGILLEQ-AIYQLLKKYFKDKPYYTHILELFYDVT 206 Query: 156 LQGMLGGQMLDI---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 ++ +G Q LD+ + E I K KT A F M + N+ Sbjct: 207 MKSAMG-QCLDMLTAKSFKSKKLEKYTMENYKAIVKYKT-AYYSFVLPVCLAMRMTNVND 264 Query: 207 KERLR---CFGENLGIIFQLADDLLDC 230 +E R ++G FQ+ DD LDC Sbjct: 265 QEIFRQAKVILLDMGQFFQIQDDYLDC 291 >gi|317506405|ref|ZP_07964210.1| hypothetical protein HMPREF9336_00580 [Segniliparus rugosus ATCC BAA-974] gi|316255285|gb|EFV14550.1| hypothetical protein HMPREF9336_00580 [Segniliparus rugosus ATCC BAA-974] Length = 221 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 14/160 (8%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 D ++ IRY GGK +R+ L T A+ +E +H SL+HDD+ +D Sbjct: 61 DAGVAPIRY---GGKAVRAALATLSCEALGGAAALAVDAAVCVELLHNASLLHDDI--ID 115 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 RRG+P + A++AG+ L A ++ ++ + +++ S T Sbjct: 116 GDRQRRGRPAAWTVFGVPAAMLAGDALFFLAMGRAAAMQSGTACDSVGKVIDSFTE---- 171 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFAC 193 ++ G+ LDI E V ++ M KTGAL+ AC Sbjct: 172 --VIEGEYLDILLEGRSGATVSEVEAMAASKTGALIALAC 209 >gi|317010521|gb|ADU84268.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori SouthAfrica7] Length = 307 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 14/163 (8%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 S + I S +L L+ ++ M G+ + D+ + + I + KT + Sbjct: 117 SKMGESIA-QILSNAVLRLSRG-EIEDMFVGECFNS-----DKQKYWRILEDKTAHFIEA 169 Query: 192 ACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + +S AI+ N+ ++ FG + G+ FQ+ DDLLD +D Sbjct: 170 SLKSMAILL----NKDAKMYADFGLHFGMAFQIIDDLLDITQD 208 >gi|315271285|gb|ACO46371.2| putative Polyprenyl synthetase [Deinococcus deserti VCD115] Length = 329 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 7/92 (7%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGY 99 Y GGK IRS L+ A V H T A + A +E + LIHDD+ D+ Sbjct: 32 YPQRGGKGIRSELLLASAQAHGVAHDTDAWDQAQWLAAGLELFQNWVLIHDDI--QDDSE 89 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 RRG+P +H Y AI G+ L Y + + Sbjct: 90 ERRGQPALHRLYGVPLAINVGDALHAYMWAAV 121 >gi|326533542|dbj|BAK05302.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 424 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 12/152 (7%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDD+ +D+ RRG +++ +++AG+ LL+ A +++ Sbjct: 173 EMIHVASLLHDDV--LDDADTRRGVTSLNCIMGNKLSVLAGDFLLSRACVALAALGNT-- 228 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197 + S + ++ H + + M QM +++ + + +QK KT +L+ +C++ A Sbjct: 229 -EVVSLMATAVGHLVTGETM---QMSTSREQ--RRSMEYYLQKTYYKTASLISNSCKAVA 282 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 I+A + +G NLG+ FQL DD+LD Sbjct: 283 ILAGHTAEVSVLAYEYGRNLGLAFQLIDDVLD 314 >gi|108562668|ref|YP_626984.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori HPAG1] gi|107836441|gb|ABF84310.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori HPAG1] Length = 307 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + + S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGEVIAQAL-SNAVLRLSRG------------EIEDVFVGGSFNSDKQKYWCILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLNFGMAFQIIDDLLDITQD 208 >gi|62389517|ref|YP_224919.1| geranylgeranyl-pyrophosphate sythase [Corynebacterium glutamicum ATCC 13032] gi|41324851|emb|CAF19333.1| geranylgeranyl-pyrophosphate sythase [Corynebacterium glutamicum ATCC 13032] Length = 372 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 37/220 (16%) Query: 40 LSAIRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 L A AL GGK IR ++ T V T L+V A+E +H L+HDD+ Sbjct: 49 LDAAFQALRGGKLIRPRMLLGLYNTLVDDDIEVKLNTVLQVAVALELLHFSLLVHDDV-- 106 Query: 95 MDNGYIRRGKPTV---------------------HIQYDEVTAIIAGNGLLTYAFEIISS 133 +D RRGK H+ + + ++ GN L +I + Sbjct: 107 IDGDLYRRGKLNFIGQILMHRTPESFAQIQRDPEHLDWAQSNGLLMGNLFLAATHQIFA- 165 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ--KMKTGALM 189 + L + R +L+ L H I + G+ LD+ + I ++ ++KT Sbjct: 166 -RLDLPHHQRVRLLDLLNHTIN--DTIVGEFLDVGLSSKAISPNMDIALEMSRLKTATYT 222 Query: 190 C-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + AI+A Q + ++ G NLGI +QL DD L Sbjct: 223 FELPMRAAAILAELPQEIETKIGEIGTNLGIAYQLQDDYL 262 >gi|289582888|ref|YP_003481354.1| polyprenyl synthetase [Natrialba magadii ATCC 43099] gi|289532441|gb|ADD06792.1| Polyprenyl synthetase [Natrialba magadii ATCC 43099] Length = 354 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 11/204 (5%) Query: 38 RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 R LS + LL GGK+ R+ L F + + E +H ++I DD+ Sbjct: 47 RALSDPLWDLLDRGGKRWRAVLFLVFIEGFGEDPTEYMPYACIPEILHNGTIIVDDV--E 104 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D RRG+P +H Y A+ AGN L +++ L + L + Sbjct: 105 DQAAKRRGEPALHHIYGRDVALNAGNALYFLPLKLLRENPGDLPAEQQLAAYEMLMDELN 164 Query: 156 LQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 + GQ +DI ++ I Q + KTG L AI+ + +E + Sbjct: 165 RTHL--GQGMDICWHNEREVRITPAQYLEMCACKTGCLGRIVARLAAIITDQPAHVEEAV 222 Query: 211 RCFGENLGIIFQLADDLLDCEEDL 234 + E + FQ+ DD+LD E L Sbjct: 223 ATYAELTAVAFQIGDDILDVENSL 246 >gi|207093075|ref|ZP_03240862.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori HPKX_438_AG0C1] Length = 270 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 24/168 (14%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + + S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIAKAL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + +S AI+ +N K FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL--DKNAK-IYADFGLNFGMAFQIIDDLLDITQD 208 >gi|23308797|ref|NP_599861.2| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] gi|21323391|dbj|BAB98019.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum ATCC 13032] Length = 382 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 37/220 (16%) Query: 40 LSAIRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 L A AL GGK IR ++ T V T L+V A+E +H L+HDD+ Sbjct: 59 LDAAFQALRGGKLIRPRMLLGLYNTLVDDDIEVKLNTVLQVAVALELLHFSLLVHDDV-- 116 Query: 95 MDNGYIRRGKPTV---------------------HIQYDEVTAIIAGNGLLTYAFEIISS 133 +D RRGK H+ + + ++ GN L +I + Sbjct: 117 IDGDLYRRGKLNFIGQILMHRTPESFAQIQRDPEHLDWAQSNGLLMGNLFLAATHQIFA- 175 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ--KMKTGALM 189 + L + R +L+ L H I + G+ LD+ + I ++ ++KT Sbjct: 176 -RLDLPHHQRVRLLDLLNHTIN--DTIVGEFLDVGLSSKAISPNMDIALEMSRLKTATYT 232 Query: 190 C-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + AI+A Q + ++ G NLGI +QL DD L Sbjct: 233 FELPMRAAAILAELPQEIETKIGEIGTNLGIAYQLQDDYL 272 >gi|1749416|dbj|BAA13767.1| unnamed protein product [Schizosaccharomyces pombe] Length = 339 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 29/206 (14%) Query: 48 LGGKKIRSFLVTECASLF------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 LGGK R V + + ++ A +G +E + + LI DD+ MD R Sbjct: 32 LGGKYNRGLSVIDSYEILLGHPLDEAAYMKAAVLGWMVELLQSFFLIADDI--MDASKTR 89 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQ 157 RG+P ++ GN + AF + S+ LK + R + ++ L H++ Q Sbjct: 90 RGQPCWYLMPG------VGNIAINDAFMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQ 143 Query: 158 GMLGGQM--LDIQDEFIDETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERL 210 LG Q+ L ++ +D ++ F +QK + A F M A E L Sbjct: 144 TELGQQLDLLTAPEDSVDLSK-FSLQKHSFIVIYKTAFYSFYLPVELAMHLAGVATPENL 202 Query: 211 RCFGENL---GIIFQLADDLLDCEED 233 +C + L G FQ+ DD LDC D Sbjct: 203 KCAQDILIILGKYFQVQDDYLDCYGD 228 >gi|270656515|ref|ZP_06222316.1| octaprenyl-diphosphate synthase [Haemophilus influenzae HK1212] gi|270317032|gb|EFA28689.1| octaprenyl-diphosphate synthase [Haemophilus influenzae HK1212] Length = 127 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFE 129 ++ +++ G+ + T AF+ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQ 127 >gi|57753869|dbj|BAD86799.1| geranylgeranyl diphosphate synthase [Streptomyces sp. KO-3988] Length = 388 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 36/212 (16%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+IR L T +GAA +E H ++LIHDD+ MD RRG+PT Sbjct: 86 GGKRIRPLLCMVGWHAAGGYGETEPIIGAAASLELFHAFTLIHDDV--MDASDTRRGRPT 143 Query: 107 VHI------------QYDEVTAIIAGNGLLTYAFEIISSPK---------TQLKDNIRSQ 145 +H ++ +AI+ G+ ++ ++ E++ S L D +R++ Sbjct: 144 LHRTLETGANGTTAERFGTNSAILLGDLVMVWSDELLYSSGLDQQQLVAVRPLLDAMRTE 203 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQ 204 +M+ + +L D + + + KT GA +A A Q Sbjct: 204 VMIGQYRD----------LLSTGQPTADVERSLAVIRYKTAKYTVERPLHIGAALAGADQ 253 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + + +G FQL DDLL D K Sbjct: 254 SLLDVCTAYALPIGEAFQLRDDLLGVFGDPSK 285 >gi|124800714|ref|XP_001349541.1| octaprenyl pyrophosphate synthase [Plasmodium falciparum 3D7] gi|3845103|gb|AAC71816.1| octaprenyl pyrophosphate synthase [Plasmodium falciparum 3D7] Length = 538 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 29/171 (16%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132 ++ AA E IH SL+HDD+ +D+ RRG +H ++ +I++G+ LL A I + Sbjct: 268 KIIAASEIIHMGSLLHDDV--IDDSNKRRGVIALHKKFGNKISILSGDYLLARASSIFAG 325 Query: 133 --SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET-QVFMIQKM-KTG 186 SPK + + + ++ ++ G+ L +F ++E ++++I+ KT Sbjct: 326 TGSPK------------ICRSFSYVVESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTA 373 Query: 187 ALMC--FACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLDCEED 233 +L FAC I + +N+ CF G ++G+ FQL DD LD + D Sbjct: 374 SLFSHLFAC----IAILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDYKID 420 >gi|323335062|gb|EGA76352.1| Bts1p [Saccharomyces cerevisiae Vin13] Length = 335 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK R L+ + + N+ V +E +H SL+ DD+ DN +RRG+ T H+ Sbjct: 35 GKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHL 92 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 + + I N + A +++S T K+ + L+ N L + GQ LDI Sbjct: 93 IFGVPSTINTANYMYFRAMQLVSQLTT--KEPLYHNLITIF--NEELINLHRGQGLDIYW 148 Query: 169 ----DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 E I ++++ M KTG L ++ +S + L F LGII+Q+ Sbjct: 149 RDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPFINLLGIIYQI 207 Query: 224 ADDLLDCEE 232 DD L+ ++ Sbjct: 208 RDDYLNLKD 216 >gi|323331234|gb|EGA72652.1| Bts1p [Saccharomyces cerevisiae AWRI796] Length = 292 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK R L+ + + N+ V +E +H SL+ DD+ DN +RRG+ T H+ Sbjct: 35 GKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHL 92 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 + + I N + A +++S T K+ + L+ N L + GQ LDI Sbjct: 93 IFGVPSTINTANYMYFRAMQLVSQLTT--KEPLYHNLITIF--NEELINLHRGQGLDIYW 148 Query: 169 ----DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 E I ++++ M KTG L ++ +S + L F LGII+Q+ Sbjct: 149 RDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPFINLLGIIYQI 207 Query: 224 ADDLLDCEE 232 DD L+ ++ Sbjct: 208 RDDYLNLKD 216 >gi|241722226|ref|XP_002413673.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase, putative [Ixodes scapularis] gi|215507489|gb|EEC16981.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase, putative [Ixodes scapularis] Length = 182 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 10/73 (13%) Query: 167 IQDEFI------DETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 +Q EF+ DE + F IQK KT +L+ FAC+S +I+ + +E +G N Sbjct: 6 VQGEFMQLGSKEDEGERFSHYIQKTFKKTASLIAFACKSVSILGGGDEKVQEAAYQYGRN 65 Query: 217 LGIIFQLADDLLD 229 +GI FQL DDLLD Sbjct: 66 VGIAFQLVDDLLD 78 >gi|190407883|gb|EDV11148.1| hypothetical protein SCRG_02424 [Saccharomyces cerevisiae RM11-1a] Length = 335 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK R L+ + + N+ V +E +H SL+ DD+ DN +RRG+ T H+ Sbjct: 35 GKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHL 92 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 + + I N + A +++S T K+ + L+ N L + GQ LDI Sbjct: 93 IFGVPSTINTANYMYFRAMQLVSQLTT--KEPLYHNLITIF--NEELINLHRGQGLDIYW 148 Query: 169 ----DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 E I ++++ M KTG L ++ +S + L F LGII+Q+ Sbjct: 149 RDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPFINLLGIIYQI 207 Query: 224 ADDLLDCEE 232 DD L+ ++ Sbjct: 208 RDDYLNLKD 216 >gi|302554072|ref|ZP_07306414.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] gi|302471690|gb|EFL34783.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] Length = 389 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 18/165 (10%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H ++L+HDD+ MD RR +PT + + AI+AG+ L A + + Sbjct: 135 ELVHNFTLLHDDV--MDRDATRRHRPTAWTVFGDEGAILAGDTLQALAL------RLLAQ 186 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-------DEFIDETQVFMIQKMKTGALMCFA 192 D + + + + GQ D D +DE V + + KTGAL+ A Sbjct: 187 DPHPAAPAAAALLADCVVELCAGQYADTALERRGPADVTLDE--VLAMAEAKTGALLGSA 244 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 C G + A A + L FG G+ FQL DD++ D P++ Sbjct: 245 CAIGGLYAGAGDADVAALDAFGREAGLAFQLIDDVIGIWGD-PRR 288 >gi|326905223|gb|EGE52156.1| LOW QUALITY PROTEIN: polyprenyl synthetase idsB [Mycobacterium tuberculosis W-148] Length = 222 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 24/197 (12%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 + I+++ + L H+ + DR +A GK R+ LV A+ + A Sbjct: 37 RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+ L A I+ Sbjct: 93 PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL-- 148 Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 T L D IR M L IG +L GQ D+++ + KT Sbjct: 149 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 200 Query: 186 GALMCFACESGAIMAHA 202 AL C GA++A+A Sbjct: 201 AALTGCCCALGALVANA 217 >gi|6325188|ref|NP_015256.1| Bts1p [Saccharomyces cerevisiae S288c] gi|74676512|sp|Q12051|GGPPS_YEAST RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=BET2 suppressor protein 1; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|1079673|gb|AAB68296.1| Bts1p: geranylgeranyl diphosphate synthase [Saccharomyces cerevisiae] gi|1098641|gb|AAA83262.1| Bts1p [Saccharomyces cerevisiae] gi|51013155|gb|AAT92871.1| YPL069C [Saccharomyces cerevisiae] gi|151942726|gb|EDN61072.1| geranylgeranyl diphosphate synthase [Saccharomyces cerevisiae YJM789] gi|207340526|gb|EDZ68851.1| YPL069Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256270516|gb|EEU05700.1| Bts1p [Saccharomyces cerevisiae JAY291] gi|259150089|emb|CAY86892.1| Bts1p [Saccharomyces cerevisiae EC1118] gi|285815470|tpg|DAA11362.1| TPA: Bts1p [Saccharomyces cerevisiae S288c] gi|323302759|gb|EGA56565.1| Bts1p [Saccharomyces cerevisiae FostersB] gi|323346212|gb|EGA80502.1| Bts1p [Saccharomyces cerevisiae Lalvin QA23] Length = 335 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK R L+ + + N+ V +E +H SL+ DD+ DN +RRG+ T H+ Sbjct: 35 GKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHL 92 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 + + I N + A +++S T K+ + L+ N L + GQ LDI Sbjct: 93 IFGVPSTINTANYMYFRAMQLVSQLTT--KEPLYHNLITIF--NEELINLHRGQGLDIYW 148 Query: 169 ----DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 E I ++++ M KTG L ++ +S + L F LGII+Q+ Sbjct: 149 RDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPFINLLGIIYQI 207 Query: 224 ADDLLDCEE 232 DD L+ ++ Sbjct: 208 RDDYLNLKD 216 >gi|295698494|ref|YP_003603149.1| octaprenyl-diphosphate synthase [Candidatus Riesia pediculicola USDA] gi|291157286|gb|ADD79731.1| octaprenyl-diphosphate synthase [Candidatus Riesia pediculicola USDA] Length = 318 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/185 (22%), Positives = 87/185 (47%), Gaps = 13/185 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GKKIR + + + + + IE IH +L+HDD+ +D+ IRRG+ Sbjct: 43 SGKKIRPIITLLFSKILGYRGKKDIIAASLIEFIHIATLLHDDI--IDSSIIRRGRKKSS 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + +++ G+ + + ++I ++ N+ S+ + ++ G++L + Sbjct: 101 IVFGNEISVLVGDFVYAKSLKMIVGLNSKKVLNLISK---------TVHMIIEGEILQLS 151 Query: 169 DEFIDETQ-VFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + ++ +Q +M I KT +L A + + ++K L+ +G + G FQL +D Sbjct: 152 NRTLEISQETYMKIIYQKTSSLFETAAYILTFICNVDSDKKIALKNYGRHFGNAFQLIND 211 Query: 227 LLDCE 231 + D + Sbjct: 212 IKDYQ 216 >gi|260103263|ref|ZP_05753500.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM 20075] gi|260082932|gb|EEW67052.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM 20075] Length = 92 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 2/89 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L+ A + + + + ++IE +H +LIHDD ++D+ +RRG ++ Sbjct: 5 GGKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHDD--TIDDSDLRRGNISIQ 62 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 ++ + A+ AGN L T F+++ T+ Sbjct: 63 AEFGKDVAVYAGNLLFTNFFDLMLDTTTE 91 >gi|93279242|pdb|2DH4|A Chain A, Geranylgeranyl Pyrophosphate Synthase gi|93279243|pdb|2DH4|B Chain B, Geranylgeranyl Pyrophosphate Synthase gi|149241336|pdb|2E8T|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium, Fspp And Ipp gi|149241337|pdb|2E8T|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium, Fspp And Ipp gi|149241342|pdb|2E8U|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Ipp (P21) gi|149241343|pdb|2E8U|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Ipp (P21) gi|149241348|pdb|2E8V|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Product Ggpp (P21) gi|149241349|pdb|2E8V|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Product Ggpp (P21) gi|149241352|pdb|2E8W|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Ipp gi|149241353|pdb|2E8W|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Ipp gi|149241356|pdb|2E8X|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|149241357|pdb|2E8X|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|149241362|pdb|2E90|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium, Pyrophosphate And Fpp gi|149241363|pdb|2E90|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium, Pyrophosphate And Fpp gi|149241366|pdb|2E91|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-91 gi|149241367|pdb|2E91|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-91 gi|149241372|pdb|2E92|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-261 gi|149241373|pdb|2E92|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-261 gi|149241378|pdb|2E93|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-629 gi|149241379|pdb|2E93|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-629 gi|149241382|pdb|2E94|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-364 gi|149241383|pdb|2E94|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-364 gi|149241388|pdb|2E95|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-675 gi|149241389|pdb|2E95|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-675 gi|187609232|pdb|2Z7H|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Inhibitor Bph-210 gi|187609233|pdb|2Z7H|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Inhibitor Bph-210 gi|193506615|pdb|2Z4V|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Ggpp (Inhibitory Site) gi|193506616|pdb|2Z4V|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Ggpp (Inhibitory Site) gi|193506617|pdb|2Z4W|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-749 gi|193506618|pdb|2Z4W|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-749 gi|193506619|pdb|2Z4X|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-252 (P21) gi|193506620|pdb|2Z4X|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-252 (P21) gi|193506621|pdb|2Z4Y|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-252 gi|193506622|pdb|2Z4Y|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-252 gi|193506623|pdb|2Z4Z|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-Sc01 gi|193506624|pdb|2Z4Z|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-Sc01 gi|193506625|pdb|2Z50|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-28 gi|193506626|pdb|2Z50|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-28 gi|193506627|pdb|2Z52|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-23 gi|193506628|pdb|2Z52|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium And Bph-23 gi|193885258|pdb|2Z78|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-806 gi|193885259|pdb|2Z78|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-806 gi|193885260|pdb|2Z7I|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Inhibitor Bph-742 gi|193885261|pdb|2Z7I|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Inhibitor Bph-742 gi|218766582|pdb|2ZEU|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-715 gi|218766583|pdb|2ZEU|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Bph-715 gi|218766584|pdb|2ZEV|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp And Bph-715 gi|218766585|pdb|2ZEV|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp And Bph-715 Length = 340 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK R L+ + + N+ V +E +H SL+ DD+ DN +RRG+ T H+ Sbjct: 40 GKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHL 97 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 + + I N + A +++S T K+ + L+ N L + GQ LDI Sbjct: 98 IFGVPSTINTANYMYFRAMQLVSQLTT--KEPLYHNLITIF--NEELINLHRGQGLDIYW 153 Query: 169 ----DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 E I ++++ M KTG L ++ +S + L F LGII+Q+ Sbjct: 154 RDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPFINLLGIIYQI 212 Query: 224 ADDLLDCEE 232 DD L+ ++ Sbjct: 213 RDDYLNLKD 221 >gi|323352034|gb|EGA84573.1| Bts1p [Saccharomyces cerevisiae VL3] Length = 301 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK R L+ + + N+ V +E +H SL+ DD+ DN +RRG+ T H+ Sbjct: 35 GKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHL 92 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 + + I N + A +++S T K+ + L+ N L + GQ LDI Sbjct: 93 IFGVPSTINTANYMYFRAMQLVSQLTT--KEPLYHNLITIF--NEELINLHRGQGLDIYW 148 Query: 169 ----DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 E I ++++ M KTG L ++ +S + L F LGII+Q+ Sbjct: 149 RDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPFINLLGIIYQI 207 Query: 224 ADDLLDCEE 232 DD L+ ++ Sbjct: 208 RDDYLNLKD 216 >gi|297564500|ref|YP_003683472.1| polyprenyl synthetase [Meiothermus silvanus DSM 9946] gi|296848949|gb|ADH61964.1| Polyprenyl synthetase [Meiothermus silvanus DSM 9946] Length = 332 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 22/197 (11%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GGK +R L+ L V AA+E ++LIHDD+ D RRG+ Sbjct: 39 YPERGGKMLRGMLLVYAGLAHGARLEQLLPVAAALELFQNWALIHDDIE--DASEERRGR 96 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ---LKDNIRSQLMLSLTHNIGLQGMLG 161 P +H Y A+ AG+ L + ++ + L + +R + + ++ + M Sbjct: 97 PALHRLYGMPLALNAGDALHARMWAMLIEARASYLVLDEFVRVVDLTAQGQHLEMSWMQT 156 Query: 162 GQM-LDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 + L QD + + ++ GAL S + A+ E G N Sbjct: 157 HRFDLTEQDYLLMCAQKAAYYTAVAPLRLGAL------SAGVEPPATYIEA------GLN 204 Query: 217 LGIIFQLADDLLDCEED 233 LGI FQ+ DD+L+ E D Sbjct: 205 LGIGFQIVDDVLNLEGD 221 >gi|330961586|gb|EGH61846.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 205 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 37/67 (55%) Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q+ I+D E + + KT L + S A + +AS + E LR FG++LG+ FQ Sbjct: 32 QLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNASDAQTEALRTFGDHLGVAFQ 91 Query: 223 LADDLLD 229 L DDLLD Sbjct: 92 LVDDLLD 98 >gi|324515875|gb|ADY46342.1| Farnesyl pyrophosphate synthase [Ascaris suum] Length = 338 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 21/209 (10%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR------VGAAIECIHCYSLIHD 90 +R+ +A++GGK +R L+ + + H T R VGA +E + + LI D Sbjct: 35 NRIDKLFEHAVIGGKCVRGRLLVAAYNALD-RHATRERIQQVATVGACLEILQAFFLIFD 93 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ MD RRGKP H D V +GLL + +I+ + +N ++ +S Sbjct: 94 DV--MDRSTTRRGKPCWHTLPD-VGLNAINDGLLLDS--VINEVLNDVLENDPNKDTVSS 148 Query: 151 THNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIM---AHASQ 204 Q + GQMLD + + + I KT CFA A++ Sbjct: 149 IFLRAKQMTVIGQMLDNSTSGLKDCTWERYGDIVTHKTSYYTCFAPLRVAMLLADRFMYA 208 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 +E ER+ LG +FQ DD LDC D Sbjct: 209 DETERI---AFKLGYLFQAQDDYLDCFGD 234 >gi|170290692|ref|YP_001737508.1| polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174772|gb|ACB07825.1| Polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 352 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 19/192 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+ R +L + V+ + IE +H SLI DD+ D +RRG +H Sbjct: 62 GGKRWRPWLFLVLSRNLGVDLERYKELALIIELLHNGSLIADDIE--DGAEVRRGDKAIH 119 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG---GQML 165 I+Y A+ + + I+ D ++ + ++ N L+ M+ GQ Sbjct: 120 IKYGLDIAVNLSSAMYFLPLRILMEMNV---DELKYRRLV----NAYLEDMIRIHIGQAT 172 Query: 166 DI-------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 DI E + + KTG L A AI A S+ E+ R+ F E++G Sbjct: 173 DIGWHRGLRDPETVGVEHYLEMCANKTGVLPRMAARFAAIAADLSEEEERRIGKFAESIG 232 Query: 219 IIFQLADDLLDC 230 + FQ+ DD+L+ Sbjct: 233 VAFQIQDDILNL 244 >gi|255724742|ref|XP_002547300.1| farnesyl pyrophosphate synthetase [Candida tropicalis MYA-3404] gi|240135191|gb|EER34745.1| farnesyl pyrophosphate synthetase [Candida tropicalis MYA-3404] Length = 351 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 39/246 (15%) Query: 14 KRIDTILDDLLLQ-----TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 +R ++ DD + + + M + D + + Y GGK R V + ++ N Sbjct: 9 ERFISVFDDAVEELKEVLVSYKMPQEAIDWFVKNLNYNTPGGKLNRGLSVVDTFAILNNT 68 Query: 69 HLTALR---------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L +G AIE + Y L+ DD+ MD RRG+ ++ V + Sbjct: 69 TADKLNDEQYKKVALLGWAIELLQAYFLVADDM--MDQSKTRRGQKCWYL----VEGV-- 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDI--QDEFID 173 GN + +F + + LK + R +L L H + Q LG Q+LD+ DE + Sbjct: 121 GNIAINDSFMLEGAIYVLLKKHFRQDPYYVDLLDLFHEVTFQTELG-QLLDLVTADEEVV 179 Query: 174 ETQVFMIQK------MKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLA 224 + F + K KT A F M + N +E L+ + LG FQ+ Sbjct: 180 DLDKFSLDKHSFIVIFKT-AYYSFYLPVALAMYMSGINSEEDLKQVRDILIPLGEYFQIQ 238 Query: 225 DDLLDC 230 DD LDC Sbjct: 239 DDFLDC 244 >gi|224135433|ref|XP_002322072.1| predicted protein [Populus trichocarpa] gi|222869068|gb|EEF06199.1| predicted protein [Populus trichocarpa] Length = 236 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 38/176 (21%), Positives = 83/176 (47%), Gaps = 16/176 (9%) Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L N A+ +A+ +H +L H+ + S N + + + ++ G+G+ Sbjct: 52 LVGGNRDQAMAAASALRLMHAAALTHEHILSTGN------RARIGHSFGSNIELLTGDGM 105 Query: 124 LTYAFEIISSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVF 178 + + E+++ ++N ++++ +T +G QGM GQ Q ++ID Sbjct: 106 VPFGLELLAKSDDLTQNNSERILRVIIEITQAMGSQGMALGQYNQFQHGQSDYIDH---- 161 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + K K G L A GAI+ ++ E E+LR +G +G++ + + ++ +E++ Sbjct: 162 -VCKKKEGELHSCAGAVGAILGGGTEEEIEKLRRYGLYVGLMQGVLSNWVERKEEV 216 >gi|297190113|ref|ZP_06907511.1| polyprenyl synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|197721176|gb|EDY65084.1| polyprenyl synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 354 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 104/241 (43%), Gaps = 47/241 (19%) Query: 20 LDDLLLQTASHMQTQHNDRLLSA----------IRYALLGGKKIRS---FLVTECASLFN 66 +DD+LL H + D LL+ +R A GK++R+ + A + Sbjct: 18 VDDVLL----HFVEEEIDHLLAVDGDLAPVADRLRIATNRGKRLRAAFCYWGWRAAGQPD 73 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT----------- 115 + L +R AA+E +H +++HDDL +D+ +R G PT H+ Sbjct: 74 SDAL--VRAAAAMELVHAAAVVHDDL--IDDSPLRHGLPTAHVALRAAVVASPRPGAAAR 129 Query: 116 --AIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--Q 168 A++ G+ L+++A ++ ++ P L R++ + ++ + ++ G+ L+I Sbjct: 130 SLAMLVGDLLMSWAGQLFTACGLPAAYLS---RARPLWAVL----ARELVAGECLEILRT 182 Query: 169 DEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D + + KT G + A + +E L +G LG FQL DDL Sbjct: 183 GAHPDTAASLKVIRYKTAKYTVEHPLHIGGALGGACEELREALSDYGLPLGEAFQLRDDL 242 Query: 228 L 228 L Sbjct: 243 L 243 >gi|282864692|ref|ZP_06273747.1| Polyprenyl synthetase [Streptomyces sp. ACTE] gi|282560631|gb|EFB66178.1| Polyprenyl synthetase [Streptomyces sp. ACTE] Length = 689 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 16/147 (10%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLM 147 HDD+ MD+ Y RRG+P+ + + + AI+AG+ ++ +++ + ++ + + + Sbjct: 91 HDDV--MDHAYERRGRPSANALWGQHLAILAGDCVMLSGLGMLAELGRREVAEGVAASER 148 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS---- 203 + GM+ + D+ E KT L AC GA+ A+ + Sbjct: 149 M-------CAGMV-RESADLHAASRSEESYLQAVGGKTAELFALACRLGAMQANGNGGRQ 200 Query: 204 -QNEKERLRCFGENLGIIFQLADDLLD 229 +E L FG LG +QL DD+LD Sbjct: 201 EDGREEALAGFGWQLGHAYQLRDDILD 227 >gi|262153570|ref|ZP_06028698.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1] gi|262030597|gb|EEY49233.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1] Length = 232 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 6/134 (4%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRGK T + + +++ G+ + T +F+++ T+L +++ ++S N+ +G Sbjct: 1 MRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TEL-GSMKILKLMSDAVNVIAEGE 55 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + Q+++ D E + KT L A + GAI+ AS + ++ +G+ LG Sbjct: 56 VQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGT 114 Query: 220 IFQLADDLLDCEED 233 FQL DD++D D Sbjct: 115 AFQLIDDVMDYTSD 128 >gi|328880104|emb|CCA53343.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl pyrophosphate synthetase [Streptomyces venezuelae ATCC 10712] Length = 350 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 35/202 (17%) Query: 50 GKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK++R+ F + + LR A++E +H +++HDDL +D+ +R G+PT H Sbjct: 50 GKRLRAAFCYWGWRATRQPDSDALLRAAASMELVHAAAVVHDDL--IDDSPLRHGRPTAH 107 Query: 109 IQYDEVT-------------AIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTH 152 + A++ G+ L++ A ++ ++ P L L +L Sbjct: 108 VALGAAVRHHPRAADAARSLAMLVGDLLMSLAGQLFATSGLPAAYLGRA--RPLWAALAR 165 Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNE 206 + ++ G+ L+I D + + KT + E G +A A + Sbjct: 166 D-----LIAGECLEILHTGGAPDTAASLKVIRYKTAK---YTVEQPLLIGGALAGAGERL 217 Query: 207 KERLRCFGENLGIIFQLADDLL 228 +E +G LG FQL DDLL Sbjct: 218 REGFSAYGLPLGEAFQLRDDLL 239 >gi|171691761|ref|XP_001910805.1| hypothetical protein [Podospora anserina S mat+] gi|170945829|emb|CAP72629.1| unnamed protein product [Podospora anserina S mat+] Length = 467 Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 16/209 (7%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78 +D L T + T+ D++L+A L G GK RS LV + V + + Sbjct: 163 EDFFLNT-KRLWTEQKDKVLTAPYDYLNGHPGKDFRSALVNAFDAFLEVPKESKETITKV 221 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 + +H SL+ DD+ DN +RRG P H Y I + N + A + + K Sbjct: 222 VSMLHTASLLVDDV--EDNSLLRRGLPVAHTIYGIPQTINSSNYIYFVALQELQKLKNPK 279 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQML-DIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 NI ++ +L+L G+ + +DE+++ M+ KTG L + Sbjct: 280 VVNIFAEELLNLHRGQGMDLYWRDTLTCPTEDEYLE-----MVGN-KTGGLFRLGIK--- 330 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADD 226 +M S++ + + +G+IFQ+ADD Sbjct: 331 LMQAESRSLTDCIPLVNV-IGLIFQIADD 358 >gi|158286675|ref|XP_308860.3| AGAP006894-PA [Anopheles gambiae str. PEST] gi|157020582|gb|EAA03964.3| AGAP006894-PA [Anopheles gambiae str. PEST] Length = 324 Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 16/198 (8%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q + ++ LL Y + GK++RS L ++ + + ++ +H SL+ D Sbjct: 19 QKEQDETLLQPFSYIQQIPGKQVRSKLALAINHWLHIPNDKLAAISEIVQMLHNSSLLID 78 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ DN +RRG P H Y + I A N +L A E + + ++ +L L Sbjct: 79 DIE--DNSILRRGIPVAHKIYGVASTINAANYVLFLALEKVQQLGHPDATRVYTEQLLEL 136 Query: 151 THNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G++ + +D + ET+ + KTG L A +M S+N K+ Sbjct: 137 HRGQGME-------IYWRDNYACPTETEYKQMTIRKTGGLFMLAIR---LMQLFSENRKD 186 Query: 209 RLRCFGENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 187 FTKLTA-ILGLYFQIRDD 203 >gi|195126086|ref|XP_002007505.1| GI12986 [Drosophila mojavensis] gi|193919114|gb|EDW17981.1| GI12986 [Drosophila mojavensis] Length = 337 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++LLQ +++Q + GK+ RS L + ++G ++ Sbjct: 21 DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPPEKLTQIGEIVQ 66 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H SL+ DD+ DN +RRG P H Y + I A N L A E + Sbjct: 67 MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYTLFLALEKVQQLGHPEAT 124 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L L G++ + +D F E+ ++ KTG L A + Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226 M S+N KE LG+ FQ+ DD Sbjct: 175 MQLFSEN-KEDFTKLTAILGLYFQIRDD 201 >gi|93278760|pdb|2AZK|A Chain A, Crystal Structure For The Mutant W136e Of Sulfolobus Solfataricus Hexaprenyl Pyrophosphate Synthase gi|93278761|pdb|2AZK|B Chain B, Crystal Structure For The Mutant W136e Of Sulfolobus Solfataricus Hexaprenyl Pyrophosphate Synthase Length = 289 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 20/156 (12%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIE +H SL DD+ +D RRG + Y I N L+ A II + Sbjct: 77 AIEILHSASLALDDIVDLDA--TRRGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGD 134 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 D + + + L ++G ++D + D + ++KTG+L S Sbjct: 135 --DALNTSIELEKDTSVGA----------LRDMY-DNSDYIRTIELKTGSLFKL---STV 178 Query: 198 IMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCE 231 + A+AS+ N K+++ G+ LGII+Q+ DD +D + Sbjct: 179 LSAYASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 214 >gi|157107955|ref|XP_001650014.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti] gi|108879453|gb|EAT43678.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti] Length = 321 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 22/202 (10%) Query: 31 MQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 +Q + + LL Y + GK+ R+ + N+ +G ++ +H SL+ Sbjct: 21 LQKEQDAILLEPFAYIQQIPGKQFRAKMALAFNHWLNIPEEKLAAIGEVVQMMHNSSLLI 80 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQL 146 DD+ DN +RRG P H Y + I AGN +L A + P+ Q + ++ Sbjct: 81 DDIE--DNSILRRGIPVAHKIYGIASTINAGNYVLVLALAKVHGLGHPEAQ---QVVTEQ 135 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQ 204 +L L G++ + +D FI T+ Q + KTG L A + + Sbjct: 136 LLELHRGQGME-------IYWRDNFICPTEAEYKQMVIRKTGGLFMLAIRLMQLFS---- 184 Query: 205 NEKERLRCFGENLGIIFQLADD 226 ++K+ LG+ FQ+ DD Sbjct: 185 DDKKDFTKLTAILGLSFQIRDD 206 >gi|147776970|emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera] Length = 298 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 18/174 (10%) Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD----NGYIRRGKPTVHIQYDEVTAIIA 119 LF A+ +A+ +H S H+ +P D N R G PT + ++ Sbjct: 90 LFGGRRELAIAAASALHLMHAASYFHEHIPLTDQTRPNSPPRPG-PT----FGPNIELLT 144 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDE 174 G+G++ + E+++ D+ S Q+++ LT IG QG++ GQ + Q DE Sbjct: 145 GDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELTRXIGSQGVVNGQYIQAQCDESSPS 204 Query: 175 T----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ K L GAI+ + E E+LR +G G I +++ Sbjct: 205 VGKAGSTRIVTDKKGTELHACGAACGAILGGGKEKEIEKLRKYGFYAGTIQKMS 258 >gi|307636933|gb|ADN79383.1| octaprenyl-diphosphate synthase [Helicobacter pylori 908] gi|325995523|gb|ADZ50928.1| Octaprenyl-diphosphate synthase [Helicobacter pylori 2018] gi|325997121|gb|ADZ49329.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori 2017] Length = 307 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + + S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIAQAL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG + G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLHFGMAFQIIDDLLDITQD 208 >gi|195013012|ref|XP_001983789.1| GH15381 [Drosophila grimshawi] gi|193897271|gb|EDV96137.1| GH15381 [Drosophila grimshawi] Length = 337 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++LLQ +++Q + GK+ RS L + ++G ++ Sbjct: 21 DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPAEKLTQIGEIVQ 66 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H SL+ DD+ DN +RRG P H Y + I A N L A E + Sbjct: 67 MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYTLFLALEKVQQLGHPEAT 124 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L L G++ + +D F+ E+ ++ KTG L A + Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFVCPSESDYKLMTVRKTGGLFMLAIR---L 174 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226 M S N KE LG+ FQ+ DD Sbjct: 175 MQLFSAN-KEDYTKLTAILGLYFQIRDD 201 >gi|212545524|ref|XP_002152916.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium marneffei ATCC 18224] gi|210065885|gb|EEA19979.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium marneffei ATCC 18224] Length = 957 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 14/203 (6%) Query: 29 SHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 S T + LL Y L GK +RS L+ + V + + + +H SL Sbjct: 659 SDWTTYEEEILLGPFNYLESLPGKNMRSQLIQSFNTWLKVPERSLTVIIKVVSMLHTASL 718 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 + DD+ D +RRG+P H + A+ +GN + A + + +I + Sbjct: 719 LIDDI--QDQSILRRGQPVAHSIFGTAQAMNSGNYVYFLALREVQKLQNPKAISIYVGSL 776 Query: 148 LSLTHNIGLQGMLGGQML-DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + L G++ ++ +++++D M+ KTG L C A + A + Sbjct: 777 VDLHRGQGMELFWRDSLMCPTEEQYLD-----MVAN-KTGGLFCLAVQLMQAEATVQADF 830 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 +R LGIIFQ+ DD L+ Sbjct: 831 IPLVRL----LGIIFQICDDYLN 849 >gi|183233246|ref|XP_001913825.1| geranylgeranyl pyrophosphate synthetase [Entamoeba histolytica HM-1:IMSS] gi|169801661|gb|EDS89395.1| geranylgeranyl pyrophosphate synthetase, putative [Entamoeba histolytica HM-1:IMSS] Length = 314 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 41/186 (22%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV-------HIQ--------------- 110 +R A+E +H +L HDD+ MD +RR PT+ +I+ Sbjct: 35 IRTACAMELLHDSTLAHDDI--MDEDEMRRNAPTIVKTFYDKYIERNKEDVKTEKFLFMS 92 Query: 111 ----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 Y AI+ GN L + A + T + ++++L L + GQ+LD Sbjct: 93 RGTTYASSLAIMTGNILYSMAQRLCLESGTNI-----AEMVLELFSVLNY-----GQILD 142 Query: 167 IQD-EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + ++E + +I MKT G +A S+++ E + +GE+ GI FQ+ D Sbjct: 143 MSGLNTVEEYNLNII--MKTAIFFKTTASIGLTLAGRSEHDIELGKEWGEHFGIAFQMRD 200 Query: 226 DLLDCE 231 DLLD + Sbjct: 201 DLLDID 206 >gi|308184045|ref|YP_003928178.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori SJM180] gi|308059965|gb|ADO01861.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori SJM180] Length = 307 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 26/169 (15%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + + S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIAQAL-SNAVLRLSRG------------EIEDVFVGESFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233 + + +S AI+ N+ ++ FG + G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLHFGMAFQIIDDLLDITQD 208 >gi|325068635|ref|ZP_08127308.1| Polyprenyl synthetase [Actinomyces oris K20] Length = 386 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 91/244 (37%), Gaps = 56/244 (22%) Query: 34 QHNDRLLSAIRYALLGGKKIRSFL-VTECASLF----NVNHLT---ALRVGAAIECIHCY 85 Q LL A L GGK++R+ L CA L LT A+ +G A+E Sbjct: 35 QAAPELLEAAGSVLSGGKRMRAVLGAVGCAILSAPKQRAERLTGSDAVHLGTALELYQAS 94 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDE---------VTAIIAGNGLLTYAF-------- 128 +L+HDDL MD+ RRG P H + NG + Sbjct: 95 ALVHDDL--MDSADTRRGLPAAHRVFARNHEARGWLGRPQTFGANGAILLGDLLLSLAGE 152 Query: 129 EIISSPKTQLKDNIRSQLML-------SLTHNIGLQGMLGGQMLDIQDEFI----DETQV 177 E+ + ++ RS + ++T + L GQ LD++ E + D+ Sbjct: 153 EMSALAPSRASSQTRSSAVRYARSAFDAMTTEVAL-----GQFLDVRSENLPLPWDQEAG 207 Query: 178 FMIQKMKTGALMCFACESG-------------AIMAHASQNEKERLRCFGENLGIIFQLA 224 ++M+ AL +S S E L FGE++GI FQL Sbjct: 208 AAARRMQDEALSVVRHKSARYSVRHPLLIGALLAGLDPSGTTAEHLAAFGEDVGIAFQLR 267 Query: 225 DDLL 228 DD L Sbjct: 268 DDDL 271 >gi|15899101|ref|NP_343706.1| geranylgeranyl pyrophosphate synthetase, putative (gdS-2) [Sulfolobus solfataricus P2] gi|284173784|ref|ZP_06387753.1| geranylgeranyl pyrophosphate synthetase, putative (gdS-2) [Sulfolobus solfataricus 98/2] gi|13815644|gb|AAK42496.1| Geranylgeranyl pyrophosphate synthetase, putative (gdS-2) [Sulfolobus solfataricus P2] gi|261600850|gb|ACX90453.1| Polyprenyl synthetase [Sulfolobus solfataricus 98/2] Length = 281 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 22/157 (14%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIE +H SL DD+ +D RRG + Y I N L+ A II + Sbjct: 69 AIEILHSASLALDDIVDLDA--TRRGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGD 126 Query: 138 LKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196 D + + + L ++G L+ M D + ++KTG+L S Sbjct: 127 --DALNTSIELWKDTSVGALRDMY------------DNSDYIRTIELKTGSLFKL---ST 169 Query: 197 AIMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCE 231 + A+AS+ N K+++ G+ LGII+Q+ DD +D + Sbjct: 170 VLSAYASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 206 >gi|260103264|ref|ZP_05753501.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM 20075] gi|260082925|gb|EEW67045.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM 20075] Length = 164 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/48 (52%), Positives = 28/48 (58%) Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K KT AL A E GA A + + L FGENLGI FQ+ DDLLD Sbjct: 38 KGKTAALFRLAAEEGAHFAGGNAEQSTALANFGENLGIAFQIVDDLLD 85 >gi|238060507|ref|ZP_04605216.1| type I phosphodiesterase, nucleotide pyrophosphatase [Micromonospora sp. ATCC 39149] gi|237882318|gb|EEP71146.1| type I phosphodiesterase, nucleotide pyrophosphatase [Micromonospora sp. ATCC 39149] Length = 658 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 37/242 (15%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTA- 72 R+D L L + A + +A+ R+ L GGK++R C + Sbjct: 315 RVDAELAAFLDRQAPDWPDGAPRGVFTALHRFVLAGGKRLRPQF---CYWGWRGAGGEDG 371 Query: 73 -------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI---------------- 109 L AA+E H ++LIHDD+ +D RRG P+VH Sbjct: 372 GEDGSPILVASAALELFHAFALIHDDI--LDRSDRRRGAPSVHRLFADLHARSAWRGDPE 429 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 Y TA++ G+ +A ++ + + +R + +L ++ G+ LD+ Sbjct: 430 AYGRNTALLCGDLCAAWADQMFHECGLRRDELLRGYAVFALMRTE----VIAGEYLDLVS 485 Query: 170 EFIDETQVFMIQKMKTGAL---MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D + + ++ A + + GA +A L FG+ LG FQL DD Sbjct: 486 GVGDGSVASALTVIRLKAARYTVTRPLQIGAALAGGPPELAAALAEFGDPLGDAFQLRDD 545 Query: 227 LL 228 +L Sbjct: 546 VL 547 >gi|238586537|ref|XP_002391204.1| hypothetical protein MPER_09404 [Moniliophthora perniciosa FA553] gi|215455564|gb|EEB92134.1| hypothetical protein MPER_09404 [Moniliophthora perniciosa FA553] Length = 276 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 76/189 (40%), Gaps = 19/189 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IRS + V + + +H SL+ DD+ DN +RRG P H Sbjct: 40 GKDIRSQFIAAFNLWLTVPEEKTKAIARVVNMLHSASLLIDDI--QDNSQLRRGSPVAHK 97 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLK--------DNIRSQLMLSLTHNIGLQGMLG 161 Y I N + AF+ IS + + D I + +LSL GL Sbjct: 98 IYGVPQTINTANYVYFLAFQEISKLREEDAKSRQGPDVDAIVTDELLSLHRGQGLDLFWR 157 Query: 162 GQM-LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + +DE+I M+ KTG L+ + +MA A+ N +G+ Sbjct: 158 DSLQCPTEDEYIG-----MVNN-KTGGLLRIGIK--LMMAMATTNVSVNYVPLVNLIGVY 209 Query: 221 FQLADDLLD 229 FQ+ DDLL+ Sbjct: 210 FQIRDDLLN 218 >gi|56756549|gb|AAW26447.1| SJCHGC00702 protein [Schistosoma japonicum] Length = 325 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 2/108 (1%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK IRS L+ V T + + I+ +H SLI DD+ D Y+RRGKP H Sbjct: 28 NGKGIRSLLMAAFNYWLKVPESTLDVISSVIQMLHNASLIIDDIE--DGSYLRRGKPAAH 85 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + ++I + N + A E +S + I ++ ML L G+ Sbjct: 86 CVFGTASSINSANYVYFLALEKLSVLRRPESVKIFTEQMLELHRGQGM 133 >gi|313837485|gb|EFS75199.1| polyprenyl synthetase [Propionibacterium acnes HL037PA2] gi|314929303|gb|EFS93134.1| polyprenyl synthetase [Propionibacterium acnes HL044PA1] gi|314971692|gb|EFT15790.1| polyprenyl synthetase [Propionibacterium acnes HL037PA3] gi|328906969|gb|EGG26735.1| geranylgeranyl pyrophosphate synthase [Propionibacterium sp. P08] Length = 365 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%) Query: 39 LLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +L A R GGK++R + A+ V L+ ++E +H +L+HDDL + Sbjct: 43 VLDAARDYTGGGKRLRPAFCYWGHVAAAGQPVAPSGLLQAAGSLEFLHVSALVHDDL--I 100 Query: 96 DNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQ-- 137 D+ RRG P+ H +++ AI+ G+ LL ++ ++ +S + Sbjct: 101 DHSNTRRGLPSAHRRFEAAHVTAHGDGSAEQFGFDVAILLGDLLLMWSSQMFTSAPVEAD 160 Query: 138 -------LKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 L D +R+++ +L +T G+ G LD+ V + + K Sbjct: 161 RLAAAIPLFDAMRTEVTCGQVLDVTSQSGMAGSDSESALDL---------VGRVVEYKCA 211 Query: 187 ALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + G +A S ++ + FG +G FQ DDLL Sbjct: 212 SYTVVRPSQIGVALAGGSSRLQQTMADFGSPIGRAFQYRDDLL 254 >gi|330974647|gb|EGH74713.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 131 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 2/83 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEII 131 + +++ G+ L + +FE++ Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM 123 >gi|156740413|ref|YP_001430542.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] gi|156231741|gb|ABU56524.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] Length = 317 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 19/226 (8%) Query: 17 DTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKK--IRSFLVTECASLFNVNHLTAL 73 D I+ DL ++ H + Q + AL G +K +R+ LV A L + + Sbjct: 11 DEIVGDLAKVEQVIHARMQGRPIVAQTASAALRGMEKPYLRAALVVLAARLGRYDARRVI 70 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIIS 132 AA E IH + +HD+L ++ RRG+P +++ A+++G+ LL A E+ Sbjct: 71 HAAAAAELIHFATAVHDNL--INEAARRRGQPIGDQRWNGDVALMSGDYLLALAASEMAL 128 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALM 189 +P ++ ++ S+++++ L + LD Q E++ E+ +T AL Sbjct: 129 APDARII-SMYSRVVMTFCEG-RLAPVTAVAPLDQALAQHEYVVES--------RTAALF 178 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A G + + L FG LG+ +A ++ D E D P Sbjct: 179 ETAARVGVVCGGSDDTLSNTLGRFGRELGMAMHIAAEVRDYEIDGP 224 >gi|110589268|gb|ABG77143.1| trans-hexaprenyltranstransferase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 168 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 8/162 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + + + A IE IH +L+HDD+ +D +RR + T + Sbjct: 14 GGKRLRPMLVLLAARACDYQGKRHINLAAIIEFIHTATLLHDDV--VDGSELRRNQETAN 71 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ + + +R +LS N +G + Q+L++ Sbjct: 72 AVWGNEASVLVGDFLYSRSFEMMVAV-----EQMRVMDILSHATNRIAEGEV-LQLLNVH 125 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 + E + K KT L G +++ +++ L Sbjct: 126 NPETSEADYMEVIKRKTATLFEAGTRLGGVISGVDPQQEQAL 167 >gi|297197217|ref|ZP_06914614.1| predicted protein [Streptomyces sviceus ATCC 29083] gi|297146633|gb|EFH28249.1| predicted protein [Streptomyces sviceus ATCC 29083] Length = 277 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 LG ++ + + C ALR+GAA+E I +L+HDD+ MD +RRG+P++ Sbjct: 185 LGRSRLVWWALRACGGAEPWRTHAALRIGAALELIQTCALVHDDV--MDGARLRRGRPSL 242 Query: 108 HI 109 H+ Sbjct: 243 HV 244 >gi|291401904|ref|XP_002717322.1| PREDICTED: COenzyme Q (ubiquinone) biosynthesis family member (coq-1)-like [Oryctolagus cuniculus] Length = 512 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 49/189 (25%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 260 GKAFRPVIVVLMARACNIHHNNSRDVQASQRSIALIAEMIHTASLVHDDV--IDDASSRR 317 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK TV+ + E K ++D +R + + Sbjct: 318 GKHTVNKIWGE---------------------KKVIEDLVRGEFL--------------- 341 Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 Q+ ++E +E ++K KT +L+ +C++ +++ E +G+N+GI Sbjct: 342 QLGSKENE--NERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 399 Query: 221 FQLADDLLD 229 FQL DD+LD Sbjct: 400 FQLIDDVLD 408 >gi|225460953|ref|XP_002278023.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 298 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 18/166 (10%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMD----NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+ +A+ +H S H+ +P D N R G PT + ++ G+G++ + Sbjct: 98 AIAAASALHLMHAASYFHEHIPLTDQPRANSPPRPG-PT----FGPNIELLTGDGMIPFG 152 Query: 128 FEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDET----QVF 178 E+++ D+ S Q+++ LT IG QG++ GQ + Q DE Sbjct: 153 LELLAKSNNLDDDDEHSDRILQVIIELTRTIGSQGVVNGQYIQAQCDESSPSVGKAGSTR 212 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 ++ K L GAI+ + E E+LR +G G I +++ Sbjct: 213 IVTDKKGTELHACGAACGAILGGGKEKEIEKLRKYGFYAGTIQKMS 258 >gi|327311502|ref|YP_004338399.1| Polyprenyl synthetase [Thermoproteus uzoniensis 768-20] gi|326947981|gb|AEA13087.1| Polyprenyl synthetase [Thermoproteus uzoniensis 768-20] Length = 258 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 31/206 (15%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSL 87 ++ N L +AIRY + GK IR L+ + + L R+ A +E +H SL Sbjct: 23 ESVQNPSLRAAIRYYIETPGKMIRPLLLLLFTYVLDPERLKDERIINAAALLEVLHIVSL 82 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 + DD+ +D RRG T Y + AI+A + L+ A E S Sbjct: 83 LQDDV--VDKHDARRGVETPRAIYGDGMAIVASDWLIAEAIERAVSISAD---------- 130 Query: 148 LSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 ++ + G+ L GQ LDI+ + + +KT L+ E+ +M + Sbjct: 131 -AVKYLAGVAKRLAEGQALDIEGLRKEAAE------LKTAPLI----EAAFVMPTMILSR 179 Query: 207 KERLR---CFGENLGIIFQLADDLLD 229 ++ LR G LG+++Q +DD+ D Sbjct: 180 RDLLRPAAALGRLLGVLYQYSDDMAD 205 >gi|148231821|ref|NP_001091413.1| geranylgeranyl diphosphate synthase 1 [Xenopus laevis] gi|126631300|gb|AAI33765.1| LOC100049104 protein [Xenopus laevis] Length = 296 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 82/193 (42%), Gaps = 20/193 (10%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK+IR+ L NV + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYVLQLPGKQIRTKLSQAFNHWLNVPDDKIQVIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + ++ +Q +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTMNHPNAVHVFTQQLLELHR----- 124 Query: 158 GMLGGQMLDI--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GQ LDI +D + E + + KTG L A +M S N+K+ L+ Sbjct: 125 ----GQGLDIYWRDTYTCPSEAEYKAMVLQKTGGLFGLAV---GLMQLFSSNDKD-LKPL 176 Query: 214 GENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 177 LNTLGLFFQIRDD 189 >gi|310942864|pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942865|pdb|3OAB|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942868|pdb|3OAC|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942869|pdb|3OAC|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands Length = 264 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 22/144 (15%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SP 134 I +H + +H+ LP P + +Y ++ G+G++ + FE+++ Sbjct: 69 IHLVHAAAYVHEHLP-----------PAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPA 117 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQ---KMKTGALMC 190 +T D I ++++ ++ G +GM+ G L ++E +D T + I+ K K G + Sbjct: 118 RTDDPDRIL-RVIIEISRAGGPEGMISG--LHREEEIVDGNTSLDFIEYVCKKKYGEMHA 174 Query: 191 FACESGAIMAHASQNEKERLRCFG 214 GAI+ A++ E ++LR FG Sbjct: 175 CGAACGAILGGAAEEEIQKLRNFG 198 >gi|220912326|ref|YP_002487635.1| polyprenyl synthetase [Arthrobacter chlorophenolicus A6] gi|219859204|gb|ACL39546.1| Polyprenyl synthetase [Arthrobacter chlorophenolicus A6] Length = 364 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 30/155 (19%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDD 91 D ++ +I + GGK++R+ + C + + GAA+E +LIHDD Sbjct: 41 DPIMGSISNLVTGGKRLRALM---CYWGWRGAGGDAGAAEVVTAGAALELFQAAALIHDD 97 Query: 92 LPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPK 135 + +D RRG P+VH ++ ++ AI+AG+ L+++ E + Sbjct: 98 I--IDRSDTRRGGPSVHRRFSQLHEAQGWALDSGRFGQAAAILAGDLCLSFSEEAFTDIG 155 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170 + R++L+ +L ++ GQ LDI +E Sbjct: 156 ERAASGSRARLIFNLMR----AEVMAGQYLDILEE 186 >gi|67476710|ref|XP_653910.1| geranylgeranyl pyrophosphate synthase [Entamoeba histolytica HM-1:IMSS] gi|56470952|gb|EAL48563.1| geranylgeranyl pyrophosphate synthase, putative [Entamoeba histolytica HM-1:IMSS] Length = 349 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 41/186 (22%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV-------HIQ--------------- 110 +R A+E +H +L HDD+ MD +RR PT+ +I+ Sbjct: 70 IRTACAMELLHDSTLAHDDI--MDEDEMRRNAPTIVKTFYDKYIERNKEDVKTEKFLFMS 127 Query: 111 ----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 Y AI+ GN L + A + T + ++++L L + GQ+LD Sbjct: 128 RGTTYASSLAIMTGNILYSMAQRLCLESGTNI-----AEMVLELFSVLNY-----GQILD 177 Query: 167 IQD-EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + ++E + +I MKT G +A S+++ E + +GE+ GI FQ+ D Sbjct: 178 MSGLNTVEEYNLNII--MKTAIFFKTTASIGLTLAGRSEHDIELGKEWGEHFGIAFQMRD 235 Query: 226 DLLDCE 231 DLLD + Sbjct: 236 DLLDID 241 >gi|302548937|ref|ZP_07301279.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] gi|302466555|gb|EFL29648.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM 40736] Length = 381 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 73/184 (39%), Gaps = 34/184 (18%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----QY-----------DEVTA 116 AL GAA+E + +L+HDDL MD RRG+P +H QY E A Sbjct: 69 ALHAGAAVELLQTCALVHDDL--MDAATTRRGRPALHTAVARQYGDIPRGAARRLGEAAA 126 Query: 117 IIAGNGLLTYAFEIIS-------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 ++AG+ L +A ++++ + +R + T I GQ LDIQ Sbjct: 127 VLAGDLALAWADDVMTDLLLDGDDLPPEAPARVRDIWRGTRTETI------AGQYLDIQG 180 Query: 170 EFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLAD 225 + + + +K+ + + E + C G G+ FQL D Sbjct: 181 QATGQPTPARALRAACLKSALYTVERPLALGAALAGAGQEATQALCRAGRCAGLAFQLRD 240 Query: 226 DLLD 229 DL D Sbjct: 241 DLDD 244 >gi|313127585|ref|YP_004037855.1| farnesyl-diphosphate synthase [Halogeometricum borinquense DSM 11551] gi|312293950|gb|ADQ68410.1| farnesyl-diphosphate synthase [Halogeometricum borinquense DSM 11551] Length = 280 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 13/188 (6%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 AL GGK++R + + A+ AIE +H SL+ +D IRRG P Sbjct: 35 ALAGGKRVRPAVTILSCEACGGDADAAVDFAVAIELVHNASLVI--DDIIDRSDIRRGTP 92 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 + +Y +IIA +GLL AF ++S ++ I ++ M+ L G+ Sbjct: 93 SAWAEYGYGPSIIASDGLLGEAFALLSVDDHAMQ--IVAESMVELGE---------GEAT 141 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ +E + + + KTGAL A E GA+ A A E + E +G+ FQ+ D Sbjct: 142 ELVARPTNEAEYMELARRKTGALFRAAAELGAVAADADPFTVEAFGEYAERVGVAFQIRD 201 Query: 226 DLLDCEED 233 D+LD D Sbjct: 202 DVLDATAD 209 >gi|229583172|ref|YP_002841571.1| Polyprenyl synthetase [Sulfolobus islandicus Y.N.15.51] gi|228013888|gb|ACP49649.1| Polyprenyl synthetase [Sulfolobus islandicus Y.N.15.51] Length = 281 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 20/156 (12%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIE +H SL DD+ +D RRG + Y I N L+ A II + Sbjct: 69 AIEILHSASLALDDIVDLD--VTRRGDKAAWVIYGNRKVIFITNYLIPTALRIIQTSYGD 126 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 D + + + L ++G ++D + + + I+ +KTG+L S Sbjct: 127 --DALNTSIELWKDTSVGA----------LRDMYDNNDYIRTIE-LKTGSLFKL---STV 170 Query: 198 IMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCE 231 + A+AS+ N K+++ G+ LGII+Q+ DD +D + Sbjct: 171 LSAYASKHYNTKQQMLDVGKYLGIIYQIIDDFVDYK 206 >gi|282861732|ref|ZP_06270796.1| Polyprenyl synthetase [Streptomyces sp. ACTE] gi|282563548|gb|EFB69086.1| Polyprenyl synthetase [Streptomyces sp. ACTE] Length = 350 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 38/210 (18%) Query: 43 IRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +R A GK++R+ + A + + L +R AA+E +H +++HDDL +D Sbjct: 45 LRTATAYGKRLRAAFCYWGWRAAGQPDSDAL--VRAAAAMELVHAAAVVHDDL--IDGSA 100 Query: 100 IRRGKPTVHIQYDEVT------------AIIAGNGLLTYAFEIISS---PKTQLK--DNI 142 +R G PT A++ G+ L+++A ++ S P L + Sbjct: 101 LRHGLPTAQFALRAAVSGRRRPAAARSLALLVGDLLMSWAGQLFVSSGLPAAYLSRARPL 160 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GAI 198 + L L L+ + G + D++D +V + K + E G Sbjct: 161 WAALARELIAGECLEILRTGAVPDVRDSL----KVIRYKTAK------YTVEQPLLIGGA 210 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLL 228 +A AS + +E +G LG FQL DDLL Sbjct: 211 LAGASPDLREAFSDYGLPLGEAFQLRDDLL 240 >gi|330835268|ref|YP_004409996.1| polyprenyl synthetase [Metallosphaera cuprina Ar-4] gi|329567407|gb|AEB95512.1| polyprenyl synthetase [Metallosphaera cuprina Ar-4] Length = 282 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 88/225 (39%), Gaps = 25/225 (11%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 L E R I+D+L+ ++ ++ +Y + GK+ R L+ Sbjct: 3 LMEFWFRSRVIIDELV---EKFLKETREWEVMEMSKYIMRDGKRFRGTLMFLFNGALGGE 59 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A A E +H SL DD+ D +RRG Y I N L+ A Sbjct: 60 EKNAYPGALATEILHSASLALDDIVDYDE--LRRGMKAAWAVYTNRKVIFVSNYLIPTAL 117 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 IIS + L ++ ++ +G ++D + + ++KT +L Sbjct: 118 NIISG---------YGEKALKISVDLWKDTAVGA----LKDMYGKDDDYVRTVELKTASL 164 Query: 189 MCFACESGAIMAHASQNEKERLRCF---GENLGIIFQLADDLLDC 230 A++A S + E L G+NLGII+Q+ DD +DC Sbjct: 165 FKLP----AMLASFSSGKIELLDTLMEIGKNLGIIYQIVDDYVDC 205 >gi|119962314|ref|YP_946137.1| geranylgeranyl pyrophosphate synthase [Arthrobacter aurescens TC1] gi|119949173|gb|ABM08084.1| putative geranylgeranyl pyrophosphate synthase [Arthrobacter aurescens TC1] Length = 369 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 43/236 (18%) Query: 38 RLLSAIRYALLGGKKIRSFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLIHD 90 RL + +LGGK +R L+ E + + TA+ + AAIE +H L+HD Sbjct: 42 RLWALAGQNVLGGKFVRPLLLMETYDALHKHGPAEPHQRETAISIAAAIELLHYAFLLHD 101 Query: 91 DLPSMDNGYIRRGKPTV------------------------HIQYDEVTAIIAGNGLLTY 126 D+ +D +RRG P + + + + I+ G+ LL Sbjct: 102 DV--IDGDLVRRGHPNLIGSLLAEAGETARTDGADGARAGSGLHWAQTGGILMGDMLLAA 159 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFI--DETQVFMIQK 182 + + + +L +R +L+ L H I + G+ LD+ D I D + M+ Sbjct: 160 THQAFA--RAELPHELRLRLLDLLEHTI--NETVAGEQLDVGLGDGIIAPDLQTILMMCG 215 Query: 183 MKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 KT + A +A A + L G +LG+ FQL DDLL D P++ Sbjct: 216 YKTATYTFELPLRAAATLAGADFAVENALATAGRHLGLAFQLQDDLLSTFGD-PRR 270 >gi|50424267|ref|XP_460720.1| DEHA2F08272p [Debaryomyces hansenii CBS767] gi|49656389|emb|CAG89060.1| DEHA2F08272p [Debaryomyces hansenii] Length = 350 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 32/217 (14%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFN---VNHLTALR------VGAAIECIHCYSL 87 D + + Y GGK R V + + N N L++ +G IE + Y L Sbjct: 36 DWFVGNLNYNTPGGKLNRGLSVIDTYCILNNTTANDLSSEEYSKVALLGWCIELLQAYFL 95 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL- 146 + DD+ MD+ RRG+P ++ GN + +F + + LK + R++ Sbjct: 96 VADDM--MDHSKTRRGQPCWYLNEG------VGNIAINDSFMLEGALYILLKKHFRNEKY 147 Query: 147 ---MLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQK-----MKTGALMCFACESG 196 +L L H + Q LG Q++D+ DE I + F + K + A F Sbjct: 148 YVDLLDLFHEVTFQTELG-QLIDLITADEEIVDLDKFSLSKHSFIVIYKTAYYSFYLPVA 206 Query: 197 AIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDC 230 M + N ++ L+ + LG FQ+ DD LDC Sbjct: 207 LAMFMSGINSEQDLKQVRDILIPLGEYFQIQDDFLDC 243 >gi|195428727|ref|XP_002062417.1| GK17525 [Drosophila willistoni] gi|194158502|gb|EDW73403.1| GK17525 [Drosophila willistoni] Length = 361 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++LLQ S++Q + GK+ RS L + ++G ++ Sbjct: 21 DEILLQPFSYIQE--------------IPGKQFRSELALAFNHWLLIPAEMLTQIGDIVQ 66 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H SL+ DD+ DN +RRG P H Y + I A N L A E + Sbjct: 67 MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGHPEAT 124 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L L G++ + +D F E+ ++ KTG L A + Sbjct: 125 RVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226 M S N KE LG+ FQ+ DD Sbjct: 175 MQLFSSN-KEDYSKLTAILGLYFQIRDD 201 >gi|194865508|ref|XP_001971464.1| GG14418 [Drosophila erecta] gi|190653247|gb|EDV50490.1| GG14418 [Drosophila erecta] Length = 338 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 29/208 (13%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++LLQ +++Q + GK+ RS L + ++G ++ Sbjct: 21 DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQ 66 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H SL+ DD+ DN +RRG P H Y + I A N L A E + Sbjct: 67 MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEAT 124 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L L G++ + +D F E+ ++ KTG L A + Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQL 177 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226 + N KE LG+ FQ+ DD Sbjct: 178 FS----NNKEDYSKLTAILGLYFQIRDD 201 >gi|225462001|ref|XP_002272641.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296089967|emb|CBI39786.3| unnamed protein product [Vitis vinifera] Length = 341 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 89/214 (41%), Gaps = 27/214 (12%) Query: 34 QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSL 87 Q +R+L Y + GGK R V + L LT A +G IE + Y L Sbjct: 33 QWVERMLD---YNVPGGKLNRGLSVVDSYKLLQGRQLTDDEVFLACVLGWCIEWLQAYFL 89 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 + DD+ MDN + RRG+P + +V I A +G++ +I K K + Sbjct: 90 VLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVILRN-QIPRILKNHFKGKPYYVDL 145 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF---ACESG 196 L L + + Q GQM+D+ E + I + KT + AC Sbjct: 146 LDLFNEVEFQTA-SGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVAC--A 202 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +MA + + ++ +GI FQ+ DD LDC Sbjct: 203 LLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDC 236 >gi|296211695|ref|XP_002752610.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Callithrix jacchus] Length = 261 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 16/132 (12%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR------YALLG-GKKIRSFLVTECA 62 Q R+ L + SH +T + L+S Y G GK R +V A Sbjct: 61 QAGPDRLQWAKSSCTLGSMSHRETLFQELLISTSELKEMSEYYFDGKGKAFRPIIVALMA 120 Query: 63 SLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115 N++H + V A+ E IH SL+HDD+ +D+ RRGK TV+ + E Sbjct: 121 RACNIHHNNSRHVQASQRTIALIAEMIHTASLVHDDV--IDDASSRRGKHTVNKIWGEKK 178 Query: 116 AIIAGNGLLTYA 127 A++AG+ +L+ A Sbjct: 179 AVLAGDLILSAA 190 >gi|321475353|gb|EFX86316.1| hypothetical protein DAPPUDRAFT_313317 [Daphnia pulex] Length = 347 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 31/210 (14%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMD 96 + Y L GGK R V E +F + + TA+ +G A+E + + L+ DD+ MD Sbjct: 42 VEYNLKGGKMNRGLAVVESFMIFKNDQISEQDIETAIALGWAVEMLQAFFLVADDI--MD 99 Query: 97 NGYIRRGKPTVHIQYD-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 + RR KP + + V A L + ++I+ S KD +L L H++ Sbjct: 100 DSLTRRMKPCWYRTNNLGVKAFNDSILLESLIYQILLS---YCKDRHYYLPILELFHDVT 156 Query: 156 LQGMLGGQMLDIQ-----------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 ++ L GQ +D+ +F ET ++ K KT + AI S Sbjct: 157 MRTSL-GQAMDLHSTPDPNQSPDLSKFTMETYDAIV-KYKTAYYSFYL--PVAIAMRVSG 212 Query: 205 NEKERLRCFGEN----LGIIFQLADDLLDC 230 + ERL E+ +G FQ+ DD LDC Sbjct: 213 IQDERLFKQAEDILLPMGRFFQVQDDYLDC 242 >gi|227826552|ref|YP_002828331.1| polyprenyl synthetase [Sulfolobus islandicus M.14.25] gi|227829194|ref|YP_002830973.1| Polyprenyl synthetase [Sulfolobus islandicus L.S.2.15] gi|229577963|ref|YP_002836361.1| Polyprenyl synthetase [Sulfolobus islandicus Y.G.57.14] gi|238618638|ref|YP_002913463.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.4] gi|284996549|ref|YP_003418316.1| Polyprenyl synthetase [Sulfolobus islandicus L.D.8.5] gi|227455641|gb|ACP34328.1| Polyprenyl synthetase [Sulfolobus islandicus L.S.2.15] gi|227458347|gb|ACP37033.1| Polyprenyl synthetase [Sulfolobus islandicus M.14.25] gi|228008677|gb|ACP44439.1| Polyprenyl synthetase [Sulfolobus islandicus Y.G.57.14] gi|238379707|gb|ACR40795.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.4] gi|284444444|gb|ADB85946.1| Polyprenyl synthetase [Sulfolobus islandicus L.D.8.5] gi|323473631|gb|ADX84237.1| polyprenyl synthetase [Sulfolobus islandicus REY15A] gi|323476280|gb|ADX81518.1| Polyprenyl synthetase [Sulfolobus islandicus HVE10/4] Length = 281 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 20/156 (12%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIE +H SL DD+ +D RRG + Y I N L+ A II + Sbjct: 69 AIEILHSASLALDDIVDLD--VTRRGDKAAWVIYGNRKVIFITNYLIPTALRIIQTSYGD 126 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 D + + + L ++G ++D + + + I+ +KTG+L S Sbjct: 127 --DALNTSIELWKDTSVGA----------LRDMYDNNDYIRTIE-LKTGSLFKL---STV 170 Query: 198 IMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCE 231 + A+AS+ N K+++ G+ LGII+Q+ DD +D + Sbjct: 171 LSAYASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 206 >gi|217033468|ref|ZP_03438898.1| hypothetical protein HP9810_1g82 [Helicobacter pylori 98-10] gi|216944173|gb|EEC23601.1| hypothetical protein HP9810_1g82 [Helicobacter pylori 98-10] Length = 307 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 24/168 (14%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + A +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE------TQVFMIQKMKT 185 S +L+ N L+ G +I+D F+ E + + I + KT Sbjct: 117 SK---------MGELIAKALSNAVLRLSRG----EIEDVFVGECFNSNKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + +S AI+ + + FG N G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL---DKDAKIYADFGLNFGMAFQIVDDLLDIIQD 208 >gi|316972597|gb|EFV56270.1| octaprenyl pyrophosphate synthase / phytoene synthase [Trichinella spiralis] Length = 272 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 15/134 (11%) Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 PTV+ + TA G +II + T L +I + ++S+ I L ++ G++ Sbjct: 118 PTVNATHGYKTATFFG--------DIILAKATILLTSINNAEVISIVSKI-LDDLVKGEL 168 Query: 165 LDIQDEFIDETQVF--MIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + ++ DE+++F + K KTG+L + ++ A++A+ S+ + + FG N G++ Sbjct: 169 IQMESG-SDESRLFSEYLTKCYKKTGSLFSNSLKAAAVLANCSELCVKNVYQFGRNFGLM 227 Query: 221 FQLADDLLD-CEED 233 FQL DDLLD C D Sbjct: 228 FQLVDDLLDFCSVD 241 >gi|229583716|ref|YP_002842217.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.27] gi|228018765|gb|ACP54172.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.27] Length = 281 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 20/156 (12%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIE +H SL DD+ +D RRG + Y I N L+ A II + Sbjct: 69 AIEILHSASLALDDIVDLD--VTRRGDKAAWVIYGNRKVIFITNYLIPTALRIIQTSYGD 126 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 D + + + L ++G ++D + + + I+ +KTG+L S Sbjct: 127 --DALNTSIELWKDTSVGA----------LRDMYDNNDYIRTIE-LKTGSLFKL---STV 170 Query: 198 IMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCE 231 + A+AS+ N K+++ G+ LGII+Q+ DD +D + Sbjct: 171 LSAYASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 206 >gi|262202475|ref|YP_003273683.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247] gi|262085822|gb|ACY21790.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247] Length = 377 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 30/207 (14%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRG 103 AL GGK++R+ A L A V AA IE H +LIHDD+ MD+ RRG Sbjct: 66 ALSGGKRLRAAFCLWGARGAAGGDLPAGAVDAAAAIELFHLGALIHDDV--MDHSDRRRG 123 Query: 104 KPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI--RSQ 145 PTVH + + + AI+AG+ L ++ E+++ + I R++ Sbjct: 124 MPTVHRRFADRHTADGLAGDPEAFGQAVAILAGDLCLMWSDEVLADAVSAASPEIGQRAR 183 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV----FMIQKMKTGALMCFACESGAIMAH 201 + SL + +GGQ LD+ + T + ++ + G +A Sbjct: 184 AVWSLMRD----ETVGGQYLDMLAQATPTTSLTRTRLVLHYKSAKYTVAQPLRLGGALAG 239 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLL 228 A + + G G FQL DDLL Sbjct: 240 ADDDLLDAYESLGLIAGEAFQLRDDLL 266 >gi|218294741|ref|ZP_03495595.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23] gi|218244649|gb|EED11173.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23] Length = 330 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 22/199 (11%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GGK +R L A AL G +E + LIHDD+ D RRG+ Sbjct: 34 YPRRGGKMLRGLLTYYSALAHGAPEEAALLAGEGLELFQNWVLIHDDI--EDGSEERRGR 91 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 P +H + A+ AG+ L + +++ + + ++ +++L H + ++ GQ Sbjct: 92 PALHRLHPMPLALNAGDALHGEMWGLLA--EGVARGSLSPEVLLEF-HQV-VRRTAYGQH 147 Query: 165 LDI------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA----HASQNEKERLRCFG 214 LD+ + + E + M+ GA++A H E G Sbjct: 148 LDLLWTLTGRLDLTPEDYLRMVAHKAAYYTAVAPLRLGALLAGNTPHPLYEEA------G 201 Query: 215 ENLGIIFQLADDLLDCEED 233 LG FQ+ DD+L+ E D Sbjct: 202 LKLGTAFQIVDDVLNLEGD 220 >gi|317038629|ref|XP_001401830.2| hypothetical protein ANI_1_1856184 [Aspergillus niger CBS 513.88] Length = 693 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 12/190 (6%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + K IR ++ N A +V I +H SL+ DD+ DN +RRG+PT Sbjct: 397 VPSKNIRGTIIQALNLWLNAPESVATQVEDLIGHLHDSSLLLDDI--QDNSELRRGRPTA 454 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + I A LT AFE + + R ++ L L+ + GQ +D+ Sbjct: 455 YRVFGVAQTINAATHALTQAFEKAPHMGSSVSSPARMVMVCLLIEVDELRNLHVGQAMDL 514 Query: 168 ---QDEFIDETQVFM-IQKMKTGALMCFACE----SGAIMAHASQNEKERLRCFGENLGI 219 + + ++ + ++KTGAL C A G+ A A + + L +LG Sbjct: 515 HWTRSGYRPSIADYLEMNRLKTGALFCLASNLLYIQGSFSAEAIK--QTDLSDLMISLGQ 572 Query: 220 IFQLADDLLD 229 FQ DD ++ Sbjct: 573 YFQARDDYIN 582 >gi|14573639|gb|AAK68152.1| farnesyldiphosphate synthase [x Citrofortunella microcarpa] Length = 341 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 27/218 (12%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIH 83 H Q DR+L Y + GGK R V + L T + +G IE + Sbjct: 29 HDSRQWVDRMLD---YNVPGGKLNRGLSVVDSYRLLKEGKTTDDEFFLSSALGWCIEWLQ 85 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 Y L+ DD+ MD + RRG+P + +V I A +G+L I K +D Sbjct: 86 AYFLVLDDI--MDGSHTRRGQPC-WFRVPKVGMIAANDGVLLRN-HISRILKNHFRDKPY 141 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF---A 192 +L L + + Q GQM+D+ E + I + KT + A Sbjct: 142 YVDLLDLFNEVEFQTA-SGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVA 200 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 C +MA + ++ ++ +GI FQ+ DD LDC Sbjct: 201 C--ALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDC 236 >gi|302812791|ref|XP_002988082.1| hypothetical protein SELMODRAFT_159144 [Selaginella moellendorffii] gi|300144188|gb|EFJ10874.1| hypothetical protein SELMODRAFT_159144 [Selaginella moellendorffii] Length = 363 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 97/247 (39%), Gaps = 28/247 (11%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTEC 61 G +K + R+ +L+ + S T + +S + Y + GGK R V + Sbjct: 21 GSFKAKFMDAYHRLKK---ELIADSESFSHTFESREWVSEVLDYNVPGGKLNRGLSVVDS 77 Query: 62 ASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 L A +G IE + Y LI DD+ MD+ + RRG+P Q +V Sbjct: 78 LVLLRSGEELSEDELFLAFALGWCIEWLQAYFLILDDI--MDDSHTRRGQPCWFRQ-PKV 134 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEF 171 I A +G+L I K D Q + L + Q G QMLD+ Sbjct: 135 GLIAANDGILLRN-HISRILKRHFHDKPYYQDLRELFDEVEYQTACG-QMLDLITTPPGE 192 Query: 172 IDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQL 223 +D ++ M I K KT A F + + +++K + +G FQ+ Sbjct: 193 VDLSKYVMDTYLRIVKYKT-AYYSFYLPVACALYMSGEDDKSKFESAERILVQMGTYFQI 251 Query: 224 ADDLLDC 230 DD LDC Sbjct: 252 QDDYLDC 258 >gi|331212927|ref|XP_003307733.1| prenyl transferase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309298136|gb|EFP74727.1| prenyl transferase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 452 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 34/188 (18%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127 R+ E IH SL+HDD+ +D RRG+ + Q+ +++AG+ LL A Sbjct: 161 RLAEIAELIHVSSLLHDDV--IDQAETRRGQASAPRQFGSKLSVLAGDFLLARASLNLAR 218 Query: 128 ------FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLDIQDEFIDETQV-- 177 E+ISS + L + QL L ++ L ++Q + + Sbjct: 219 LRNFEVIELISSVISNLVEGELIQLESILVPHLQNPPKLAPSSDPSNLQSTSLAHSPAAF 278 Query: 178 ------FMIQK--MKTGALMCFACESGAIMAHA--------SQNEKERLRCFGENLGIIF 221 F ++K +KT +L+ C + I++ + +Q E FG++LG+ F Sbjct: 279 DPRLFDFYMRKNYLKTASLIAKTCRAAVILSSSSSSPPSPQTQELIEASYQFGKHLGLAF 338 Query: 222 QLADDLLD 229 Q+ DD+LD Sbjct: 339 QIVDDILD 346 >gi|302388553|ref|YP_003824375.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1] gi|302199181|gb|ADL06752.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1] Length = 328 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 13/186 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GK IR++ + C S+ + + A + + +A+E +H +L+HDD+ +D+ RRG T+ Sbjct: 51 GKFIRAYGLMAC-SMDEEDKVPADAVTLASAVELLHLATLVHDDV--IDDADTRRGIETL 107 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 ++ + A+I G+ Y + + + ++Q N + +G +I Sbjct: 108 QKRFGKKAAVICGD----YLLSLALKLASSIPQ--KNQYEALDMPNYLCRICMGELRQEI 161 Query: 168 QDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + +D + + I K KT AL + GA+++ + + R G ++G+IFQL D Sbjct: 162 NNGNLDLSVYRYLSIIKGKTAALFEASFHGGAMLSTKDERKLRMYRKAGNDVGMIFQLMD 221 Query: 226 DLLDCE 231 D +D E Sbjct: 222 DCIDYE 227 >gi|269127237|ref|YP_003300607.1| polyprenyl synthetase [Thermomonospora curvata DSM 43183] gi|268312195|gb|ACY98569.1| Polyprenyl synthetase [Thermomonospora curvata DSM 43183] Length = 353 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 26/171 (15%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------EVTAIIAGN 121 ++E + +LIHDD+ MD RRG+P+ H +++ E +AI+ G+ Sbjct: 78 SLELLQASALIHDDV--MDASDTRRGQPSAHRRFEAMHREHGWRGGAAAFGEGSAILLGD 135 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----ETQV 177 L ++ E+ + + R + + L ++ GQ LD+ + E + Sbjct: 136 LCLAWSAEMFDTSGLDTEALRRGRPVFDLMRTE----VICGQYLDMLESARGAGTVERAL 191 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +++ + GA +A + E LR +G LGI FQL DD+L Sbjct: 192 TVVEFKSAKYTIERPLHMGAELAGGTPEVVEALRAYGRPLGIAFQLRDDVL 242 >gi|203287773|ref|YP_002222788.1| octaprenyl-diphosphate synthase [Borrelia recurrentis A1] gi|201084993|gb|ACH94567.1| octaprenyl-diphosphate synthase [Borrelia recurrentis A1] Length = 348 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 18/198 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGKKIR L+ A N+ ++ +E H SLI DD+ D RRGKP Sbjct: 57 GGKKIRPMLMILLAHALGYNNSDTENLYKLSMLLELPHSGSLIIDDIE--DGALKRRGKP 114 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 ++H+ Y +I N + ++I S+ KT K I +L+ N+ L GQ Sbjct: 115 SIHLIYGLDNSINTANLIYFLPAKLIQTSNLKTSQKLIIYENFFTTLS-NLHL-----GQ 168 Query: 164 MLDI---QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 +DI +I + ++ + + KT +L A I+ + K F N+G Sbjct: 169 GIDITLHNGTYIPSIEEYISLVEHKTSSLFGMAGFLAGILTNNENKAKNLYNTF-LNIGT 227 Query: 220 IFQLADDLLDCEEDLPKK 237 FQ+ DD+ + ++ + K Sbjct: 228 YFQMIDDIKNIKDGVKGK 245 >gi|89894773|ref|YP_518260.1| hypothetical protein DSY2027 [Desulfitobacterium hafniense Y51] gi|89334221|dbj|BAE83816.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 326 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 19/187 (10%) Query: 49 GGKKI-RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI-RRGKPT 106 GGK+ L+ +F+ N T ++V A+E + I DD+ DN + R P Sbjct: 46 GGKQYPWGNLLFTIGDVFSDNQETIVQVAVAMELYALAADIFDDIEDQDNDELPWRTIPA 105 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL----KDNIRSQLMLSLTHNIGLQGMLGG 162 AI N +L +F+ +++ Q ++I + ++ H + + G Sbjct: 106 AQ-------AINTANLILFLSFKALAAINDQALYRQANDIFQTMGITACHGQNQEFLYEG 158 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q + I Q F + K+GAL C+ A++A + L FG+NLGII Q Sbjct: 159 Q------DAITLAQYFDTARKKSGALTAGTCKLAAVLAGCDTSLILDLEKFGQNLGIISQ 212 Query: 223 LADDLLD 229 + +DL D Sbjct: 213 IKNDLRD 219 >gi|260575018|ref|ZP_05843019.1| Geranylgeranyl pyrophosphate synthase-like protein [Rhodobacter sp. SW2] gi|259022640|gb|EEW25935.1| Geranylgeranyl pyrophosphate synthase-like protein [Rhodobacter sp. SW2] Length = 419 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 5/126 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNV 67 L E R + D +L+ + Q Q + L S +R Y GK +R LV Sbjct: 211 LMETMARCKARVVDEILRLIPNKQPQRD--LYSLMRDYVQREGKGLRPTLVIATCMALGG 268 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +R AA+E H L+HDD+ D RRG PT+H+ + A+ AG+G+ +A Sbjct: 269 RFEDGVRAAAALEMFHNGFLVHDDI--ADESTHRRGLPTLHMSHGIGLAVNAGDGMHLFA 326 Query: 128 FEIISS 133 ++ S Sbjct: 327 VDMTLS 332 >gi|116670118|ref|YP_831051.1| polyprenyl synthetase [Arthrobacter sp. FB24] gi|116610227|gb|ABK02951.1| Polyprenyl synthetase [Arthrobacter sp. FB24] Length = 364 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 32/174 (18%) Query: 20 LDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-----VNHLTA 72 L+D L S M +Q D L+ +I + GGK++R+ + C + Sbjct: 22 LNDFLATRQSVMSAISQDIDPLMGSISNLVTGGKRLRALM---CYWGWRGAGGEAAATEV 78 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TA 116 + G+A+E +LIHDD+ +D RRG P+VH ++ ++ A Sbjct: 79 VTAGSALELFQAAALIHDDI--IDRSDTRRGGPSVHRRFSQLHEDQGWALDSERFGHAAA 136 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170 I+ G+ L+++ E T + + S L N+ ++ GQ LDI +E Sbjct: 137 ILTGDLCLSFSEETF----TDIGEAAASGSQARLIFNLMRAEVMAGQYLDILEE 186 >gi|238060277|ref|ZP_04604986.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149] gi|237882088|gb|EEP70916.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149] Length = 360 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 51/217 (23%) Query: 45 YALLGGKKIR---SFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYI 100 + L GGK++R ++ A + + + TAL AA+E + +LIHDDL MD Sbjct: 51 FVLGGGKRLRPAFAYWGFRGAGGADADQVVTAL---AALEFVQASALIHDDL--MDRSDT 105 Query: 101 RRGKPTVHIQY----------------DEVTAIIAGNGLLTYAFEIISS----PKTQLK- 139 RRG+P VH ++ + AI+ G+ L ++ E++ S P+ + Sbjct: 106 RRGEPAVHRRFAARHRGAGWGGDADGFGDAAAILLGDLCLVWSDELLHSAGLDPRVVARA 165 Query: 140 ----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195 D +R+++ + GQ LD+ + +T V K+ + E Sbjct: 166 RPVFDEMRTEVTV-------------GQYLDVLTQATGDTSVERAGKVARYKSAKYTVER 212 Query: 196 GAIMAHASQNEKERLRC----FGENLGIIFQLADDLL 228 ++ A + +R +G LG FQL DD+L Sbjct: 213 PLLLGAALADAPAHVRAAYSAYGLPLGEAFQLRDDVL 249 >gi|327286120|ref|XP_003227779.1| PREDICTED: farnesyl pyrophosphate synthase-like [Anolis carolinensis] Length = 351 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 85/216 (39%), Gaps = 36/216 (16%) Query: 38 RLLSAIRYALLGGKKIRSFLVT---------ECASLFNVNHLTALRVGAAIECIHCYSLI 88 RL + Y +GGK R V E N H A+ VG +E + + L+ Sbjct: 44 RLKEVVEYNAIGGKYNRGLTVVSAFGELAGPEQQDPKNFQH--AMVVGWCVELLQAFFLV 101 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-- 146 DD+ MD RRG P + + E + A N L + SS LK + R Q Sbjct: 102 ADDI--MDGSLTRRGHPCWYKK--EGVGLAAVNDSLL----LESSIYRLLKRHCRGQPYY 153 Query: 147 --MLSLTHNIGLQGMLGGQMLDI-------QDEFIDETQVFMIQKMKTGALMCFACESGA 197 +L L Q LG Q LD+ D F +E + I K KT A F A Sbjct: 154 LNLLELFLQSAYQTELG-QTLDLISAPPVDLDSFTEE-RYKAIVKYKT-AFYSFYLPVAA 210 Query: 198 IMAHA---SQNEKERLRCFGENLGIIFQLADDLLDC 230 M A S+ E R +G FQ+ DD LDC Sbjct: 211 AMYMAGIDSEEEHSHARTILLEMGEFFQIQDDYLDC 246 >gi|306822517|ref|ZP_07455895.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium dentium ATCC 27679] gi|304554062|gb|EFM41971.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium dentium ATCC 27679] Length = 391 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 34/208 (16%) Query: 49 GGKKIR------SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R SF + + L + A+E +L+HDD+ +D+ +RR Sbjct: 83 GGKRLRALLTLDSFRAFAADAAKEADFDAVLDLACAVEVFQTAALVHDDI--IDDSDLRR 140 Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLSLT 151 G+P+ H T I+ G+ L T + +I + +L D++ L++ Sbjct: 141 GRPSAHRALASGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAF-LTMH 199 Query: 152 HNIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFACESGAIMAHA-- 202 + + GQ+LD+ E +D+ + + + + KT + A ++A Sbjct: 200 REVEI-----GQVLDLAVELNPLDDPEELVRASLNVFRWKTASYTTIAPLKFGMLAAGLD 254 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230 + ++ G LG+ FQLADDLLD Sbjct: 255 ASAARDLAMSIGLPLGLAFQLADDLLDV 282 >gi|296171238|ref|ZP_06852642.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894206|gb|EFG73963.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 429 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 44/209 (21%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +RS V ALR A+ E +H ++L+ DD+ MD RRG+P+ H Sbjct: 125 GGKCLRSTFVYLGWLCGAAPGEAALRAAASFELLHVFALLQDDV--MDGSAERRGRPSAH 182 Query: 109 IQY----------------DEVTAIIAGNGLLTYAFEIISSP---KTQLK------DNIR 143 +++ E AI+ G+ L ++ +++ T+L D +R Sbjct: 183 LRFARWHRERGLSGSSRRFGESAAILLGDLCLIWSEQMLRESGVDSTRLHRAWPRYDTMR 242 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMCF-ACESGAIM 199 ++L + GQ D+ + V + + K+G E GA M Sbjct: 243 TELAV-------------GQFADLTSDVRQMPSLEAVLDVARRKSGNYTVRRPLEIGAAM 289 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228 + +L +G +G FQL DD+L Sbjct: 290 SDCDDRTLTQLGRYGAAVGEAFQLRDDVL 318 >gi|284030790|ref|YP_003380721.1| polyprenyl synthetase [Kribbella flavida DSM 17836] gi|283810083|gb|ADB31922.1| Polyprenyl synthetase [Kribbella flavida DSM 17836] Length = 357 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 31/214 (14%) Query: 40 LSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 + A R A GGK++R SF + L A++E +H +L+HDD+ MD+ Sbjct: 38 VQAARDATSGGKRLRPSFCYWGFRAAGGDPERPILTAAASLEMLHVSALVHDDV--MDSS 95 Query: 99 YIRRGKPTVHIQYDEV--------------------TAIIAGNGLLTYAFEIISSPKTQL 138 +RRG P H +++ + AI+ G+ L +A E++ + Sbjct: 96 DVRRGAPAAHKRFEALQRARTEASGTGGDPVGFGIGAAILLGDLCLIWADEMMHTSGFDA 155 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES--- 195 R+ + GQ LD+ + E + ++ + E Sbjct: 156 AALARASKFFDAVRV----EVTAGQYLDLVAQASGEADMDRALRVLRYKSATYTVERPLH 211 Query: 196 -GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA + Q + L +G LG FQL DDLL Sbjct: 212 IGAALGGGDQYLIDALSAYGLPLGEAFQLRDDLL 245 >gi|195376189|ref|XP_002046879.1| GJ13129 [Drosophila virilis] gi|194154037|gb|EDW69221.1| GJ13129 [Drosophila virilis] Length = 337 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 16/198 (8%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q + ++ LL Y + GK+ RS L + ++G ++ +H SL+ D Sbjct: 17 QKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLTQIGEIVQMLHNSSLLID 76 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ DN +RRG P H Y + I A N L A E + + ++ +L L Sbjct: 77 DIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGHPEATKVYTEQLLEL 134 Query: 151 THNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 G++ + +D F E+ ++ KTG L A +M S N KE Sbjct: 135 HRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---LMQLFSDN-KE 183 Query: 209 RLRCFGENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 184 DYSKLTAILGLYFQIRDD 201 >gi|149245192|ref|XP_001527130.1| farnesyl pyrophosphate synthetase [Lodderomyces elongisporus NRRL YB-4239] gi|146449524|gb|EDK43780.1| farnesyl pyrophosphate synthetase [Lodderomyces elongisporus NRRL YB-4239] Length = 351 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 28/215 (13%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFN---------VNHLTALRVGAAIECIHCYSL 87 D +++Y GGK R V + ++ N + A +G AIE + Y L Sbjct: 37 DWFNKSLQYNTPGGKLNRGLSVVDTYAILNNTSADKLDDAQYKKAAILGWAIELLQAYFL 96 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 + DD+ MD RRG+P ++ E IA N I + + + + Sbjct: 97 VADDM--MDQSKTRRGQPCWYLA--EGVGNIAINDSFMLEGAIYEILRKHFRQDSYYVDL 152 Query: 148 LSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQK------MKTGALMCFACESGAI 198 L L H + Q LG Q+LD+ +E +D ++ F + K KT A F Sbjct: 153 LDLFHEVTFQTELG-QLLDLVTADEEHVDLSK-FSLAKHSFIVIFKT-AYYSFYLPVALA 209 Query: 199 MAHASQNEKERLRCFGE---NLGIIFQLADDLLDC 230 M + ++ + L+ + LG FQ+ DD LDC Sbjct: 210 MYMSGISDAKDLQQVKDILIPLGEYFQIQDDFLDC 244 >gi|163801010|ref|ZP_02194910.1| polyprenyl synthetase family protein [Vibrio sp. AND4] gi|159175359|gb|EDP60156.1| polyprenyl synthetase family protein [Vibrio sp. AND4] Length = 242 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 15/176 (8%) Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 +++ A+R+ IE +H SLIHDD+ D+ +RRG V ++ AI G+ L+ Sbjct: 11 LGIHYDDAVRLAVTIELLHNASLIHDDIQDKDS--VRRGAMAVWAKFGSSIAICTGDYLI 68 Query: 125 TYAFEI---ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQVFMI 180 AF + +S K+ K +L T + + GQ+ D+ E I + I Sbjct: 69 AKAFGVLAEVSCSKSVPK-------LLEATQK-AVTTTIEGQIADLTAKEDIHRDEYEDI 120 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 K G L+ + E I+ ++ + R NL + +Q+ DD+ D +D + Sbjct: 121 AAKKAGPLLALSLELPLIVTE-KHSDIQTARHAAFNLAVAYQILDDINDSAKDFKR 175 >gi|134058744|emb|CAK38728.1| unnamed protein product [Aspergillus niger] Length = 401 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 76/189 (40%), Gaps = 23/189 (12%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 K IR ++ N A +V I +H SL+ DD+ DN +RRG+PT + Sbjct: 116 SKNIRGTIIQALNLWLNAPESVATQVEDLIGHLHDSSLLLDDI--QDNSELRRGRPTAYR 173 Query: 110 QYDEVTAIIAGNGLLTYAFEIISS---PKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + I A LT AFE + P T D +R+ L + + L G Sbjct: 174 VFGVAQTINAATHALTQAFEKVVPLMKPGTSHGFFDELRN---LHVGQAMDLHWTRSGYR 230 Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACE----SGAIMAHASQNEKERLRCFGENLGII 220 I D + ++KTGAL C A G+ A A + + L +LG Sbjct: 231 PSIAD-------YLEMNRLKTGALFCLASNLLYIQGSFSAEAIK--QTDLSDLMISLGQY 281 Query: 221 FQLADDLLD 229 FQ DD ++ Sbjct: 282 FQARDDYIN 290 >gi|309801449|ref|ZP_07695576.1| polyprenyl synthetase [Bifidobacterium dentium JCVIHMP022] gi|308221964|gb|EFO78249.1| polyprenyl synthetase [Bifidobacterium dentium JCVIHMP022] Length = 359 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 34/208 (16%) Query: 49 GGKKIR------SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R SF + + L + A+E +L+HDD+ +D+ +RR Sbjct: 51 GGKRLRALLTLDSFRAFAADAAKEADFDAVLDLACAVEVFQTAALVHDDI--IDDSDLRR 108 Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLSLT 151 G+P+ H T I+ G+ L T + +I + +L D++ L++ Sbjct: 109 GRPSAHRALASGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAF-LTMH 167 Query: 152 HNIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFACESGAIMAHA-- 202 + + GQ+LD+ E +D+ + + + + KT + A ++A Sbjct: 168 REVEI-----GQVLDLAVELNPLDDPEELVRASLNVFRWKTASYTTIAPLKFGMLAAGLD 222 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230 + ++ G LG+ FQLADDLLD Sbjct: 223 ASAARDLAMSIGLPLGLAFQLADDLLDV 250 >gi|203284235|ref|YP_002221975.1| octaprenyl-diphosphate synthase [Borrelia duttonii Ly] gi|201083678|gb|ACH93269.1| octaprenyl-diphosphate synthase [Borrelia duttonii Ly] Length = 348 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 18/198 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L+ A N+ ++ +E H SLI DD+ D RRGKP Sbjct: 57 GGKRIRPMLMILLAHALGYNNSDTENLYKISMLLELPHSGSLIIDDIE--DGALKRRGKP 114 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163 ++H+ Y +I N + ++I S+ KT K I +L+ N+ L GQ Sbjct: 115 SIHLIYGLDNSINTANLIYFLPAKLIQTSNLKTSQKLIIYENFFTTLS-NLHL-----GQ 168 Query: 164 MLDI---QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 +DI +I + ++ + + KT +L A I+ + K F N+G Sbjct: 169 GIDITLHNGTYIPSIEEYISLVEHKTSSLFGMAGFLAGILTNNENKAKNLYNTF-LNIGT 227 Query: 220 IFQLADDLLDCEEDLPKK 237 FQ+ DD+ + ++ + K Sbjct: 228 YFQMIDDIKNIKDGVKGK 245 >gi|323463187|pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A Chain A, Crystal Structure Of Geranyl Diphosphate Synthase Small Subunit From Antirrhinum Majus Length = 273 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/145 (22%), Positives = 70/145 (48%), Gaps = 6/145 (4%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 + +H + H++LP D K + ++D ++ G+G++ + E+++ Sbjct: 74 VHLMHVAAYTHENLPLTDGPM---SKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPT 130 Query: 139 KDNIRSQL--MLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACES 195 ++N L ++ LT +G +G++ GQ ++ ++ D + + K K G L Sbjct: 131 RNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQLNDLELIEYVCKKKEGTLHACGAAC 190 Query: 196 GAIMAHASQNEKERLRCFGENLGII 220 GAI+ +++ E+LR FG +G + Sbjct: 191 GAILGGCDEDKIEKLRRFGLYVGTV 215 >gi|145294798|ref|YP_001137619.1| hypothetical protein cgR_0745 [Corynebacterium glutamicum R] gi|14517651|gb|AAK64296.1|AF159510_1 GGPP synthase [Corynebacterium glutamicum] gi|140844718|dbj|BAF53717.1| hypothetical protein [Corynebacterium glutamicum R] Length = 382 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 37/220 (16%) Query: 40 LSAIRYALLGGKKIRSFLVTECASLF-----NVNHLTALRVGAAIECIHCYSLIHDDLPS 94 L A AL GGK IR ++ V T L+V AA+E +H L+HDD+ Sbjct: 59 LDAAFQALRGGKLIRPRMLLGLYDALVDDDIEVKLNTVLQVAAALELLHFSLLVHDDV-- 116 Query: 95 MDNGYIRRGKPTV---------------------HIQYDEVTAIIAGNGLLTYAFEIISS 133 +D RRGK H+ + + ++ GN L +I + Sbjct: 117 IDGDLYRRGKLNFIGQILIHRTPESFAQTQRDPEHLDWAQSNGLLMGNLFLAATHQIFA- 175 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ--KMKTGAL- 188 + L R +L+ L H + + G+ LD+ + I ++ ++KT Sbjct: 176 -RLDLPHPQRVRLLDLLNHT--MNDTIVGEFLDVGLSSKAISPNMDIALEMSRLKTATYS 232 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + AI+A Q + ++ G NLGI +QL DD L Sbjct: 233 FELPMRAAAILAELPQEIETQIGEIGTNLGIAYQLQDDYL 272 >gi|187918188|ref|YP_001883751.1| dimethylallyltransferase [Borrelia hermsii DAH] gi|119861036|gb|AAX16831.1| dimethylallyltransferase [Borrelia hermsii DAH] Length = 348 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 14/191 (7%) Query: 49 GGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L+ A N N ++ +E H SLI DD+ D RRGKP Sbjct: 57 GGKRIRPMLMILLAYALGYNNSNTKNLYKLSMLLELPHSGSLIIDDIE--DGAIKRRGKP 114 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 +H+ Y +I N + ++I + + QL++ L + GQ + Sbjct: 115 AIHLIYGLDNSINTANLIYFLPAKLIQTANLK----TSQQLLIYENFFTTLSNLHLGQGI 170 Query: 166 DI---QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 DI +I + ++ + ++KT +L A I+ + K F + LG F Sbjct: 171 DIAFHNGTYIPNVEEYISLVELKTSSLFGMAGFLAGILTNNENKAKNLYNTFMK-LGTCF 229 Query: 222 QLADDLLDCEE 232 Q+ DD+ + ++ Sbjct: 230 QIIDDIKNIKD 240 >gi|46241272|gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus] Length = 297 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/145 (22%), Positives = 70/145 (48%), Gaps = 6/145 (4%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 + +H + H++LP D K + ++D ++ G+G++ + E+++ Sbjct: 106 VHLMHVAAYTHENLPLTDGPM---SKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPT 162 Query: 139 KDNIRSQL--MLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACES 195 ++N L ++ LT +G +G++ GQ ++ ++ D + + K K G L Sbjct: 163 RNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQLNDLELIEYVCKKKEGTLHACGAAC 222 Query: 196 GAIMAHASQNEKERLRCFGENLGII 220 GAI+ +++ E+LR FG +G + Sbjct: 223 GAILGGCDEDKIEKLRRFGLYVGTV 247 >gi|307595824|ref|YP_003902141.1| polyprenyl synthetase [Vulcanisaeta distributa DSM 14429] gi|307551025|gb|ADN51090.1| Polyprenyl synthetase [Vulcanisaeta distributa DSM 14429] Length = 296 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%) Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHL-TALRVGAAIECIHCYSLIHDDLP 93 D LL+A + + GK IR LV A +L N + L A+ A++E IH SL+ DD+ Sbjct: 39 DNLLNATYHYIRNRGKLIRPTLVLLMAYALGNGSGLERAILPAASVELIHTASLLQDDI- 97 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSLT 151 MD IRRG T + Y TA++A + ++ A E I S + + + S + L++ Sbjct: 98 -MDQQRIRRGVKTPYSIYGPHTAMLASDLIIAKAVEYAIRSGDNDIVFELLNSSIKLAIG 156 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERL 210 + + L + D+++ + KT +L+ + GA + +E ++ Sbjct: 157 QS--FESELSSRANVTIDDYL------RLIYYKTASLIESSMVVGAYSVNVKDDEVISKI 208 Query: 211 RCFGENLGIIFQLADDLLD 229 R G +GI FQ+ DD++D Sbjct: 209 RDVGRFVGIAFQVRDDVID 227 >gi|317506409|ref|ZP_07964214.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974] gi|316255289|gb|EFV14554.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974] Length = 354 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 11/156 (7%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V AA + +L+HDDL +D+ R G+ V + A+ G+ LL AF + Sbjct: 85 VAAANTLLMASALVHDDL--VDHDECRYGRAAVWKAFGAPAAVHLGDALLALAFRTLRDA 142 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCF 191 +D I+ ++ Q M GQ + Q+ QV + K G + + Sbjct: 143 PAGARDEIQDRMAACA------QTMYAGQAAETLVEQNRAGSLEQVIDVAAAKAGNPVEY 196 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 SG + + A + FG + G+ FQ +DL Sbjct: 197 FVASGVLCSGAPADSVSAAAEFGLSFGMAFQFRNDL 232 >gi|118616234|ref|YP_904566.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium ulcerans Agy99] gi|118568344|gb|ABL03095.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium ulcerans Agy99] Length = 330 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 44/175 (25%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTY 126 H ++L+ DD+ MD RRG P VH+Q + E A++ G+ L + Sbjct: 129 HAFALLQDDV--MDQSPQRRGSPAVHVQLARCHQRRGLSGAAARFGESAAVLLGDICLVW 186 Query: 127 AFEIISSPKTQLK---------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-- 175 A +++ + + D +R +L + GQ+ D+ ++ + + Sbjct: 187 AEQMLRESGVEDRRLRQVWPRYDAMRIELAV-------------GQLCDLSNDIRNLSTL 233 Query: 176 -QVFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 V + + K+G E GA MA + E+L +G+ +G FQL DD+L Sbjct: 234 DAVLDVARRKSGNYTVRRPLEMGAAMADCDERTLEQLARYGDAVGEAFQLRDDML 288 >gi|62199628|gb|AAX76910.1| farnesyl diphosphate synthase [Vitis vinifera] Length = 341 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 89/214 (41%), Gaps = 27/214 (12%) Query: 34 QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSL 87 Q +R+L Y + GGK R V + L LT A +G IE + Y L Sbjct: 33 QWVERMLD---YNVPGGKLNRGLSVVDSYKLLQGRQLTDDEVFLACVLGLCIEWLQAYFL 89 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 + DD+ MDN + RRG+P + +V I A +G++ +I K K + Sbjct: 90 VLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVILRN-QIPRILKNHFKGKPYYVDL 145 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGAL---MCFACESG 196 L L + + Q GQM+D+ E + I + KT + AC Sbjct: 146 LDLFNEVEFQTA-SGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFHLPVAC--A 202 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +MA + + ++ +GI FQ+ DD LDC Sbjct: 203 LLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDC 236 >gi|291457724|ref|ZP_06597114.1| short chain isoprenyl diphosphate synthase [Bifidobacterium breve DSM 20213] gi|291380777|gb|EFE88295.1| short chain isoprenyl diphosphate synthase [Bifidobacterium breve DSM 20213] Length = 363 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 38/211 (18%) Query: 49 GGKKIRSFLVTEC--ASLFNVNHLTA-LR-----VGAAIECIHCYSLIHDDLPSMDNGYI 100 GGK++R+ L + A + T +R + AIE +L+HDD+ +D + Sbjct: 52 GGKRLRALLTLDAFDALMAQTGSSTPDMRDAMTDLACAIEVFQTAALVHDDI--IDESDL 109 Query: 101 RRGKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLKDNIRS--QLMLS 149 RRGKP+ H ++ ++ G+ L T EI +L DN + + L+ Sbjct: 110 RRGKPSAHRALEQAVHSGAIGHGLGLMLGDILATACIEIARRAARRL-DNTDAINEAFLT 168 Query: 150 LTHNIGLQGMLGGQMLDI---------QDEFIDET-QVFMIQKMKTGALMCFACESGAIM 199 + + + GQ+LD+ D +D + VF + + A Sbjct: 169 MQREVEI-----GQVLDLAVELTPLEDPDALVDASLNVFRWKTASYTTIAPLLFALLAAG 223 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A ++ ++ L G LG+ FQLADDLLD Sbjct: 224 ADPAEAWQQAL-AVGRPLGLAFQLADDLLDV 253 >gi|1491641|emb|CAA59170.1| dimethylallyltransferase [Capsicum annuum] Length = 342 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 35/214 (16%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSM 95 + Y + GGK R V + SL + A +G IE + Y L+ DD+ M Sbjct: 39 LEYNVPGGKLNRGLSVIDSYSLVDDGKELTRDEIFKASALGWCIEWLQAYFLVLDDI--M 96 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISS---PKTQLKDNIRSQLMLSL 150 DN + RRG+P + + ++V I +G+L + I+ + PK+ D +L L Sbjct: 97 DNSHTRRGQPCWY-KVEKVGMIAVNDGILLRNHISRILKNHFRPKSYYVD------LLDL 149 Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF---ACESGAIM 199 + + Q GQM+D+ + E + I + KT + AC +M Sbjct: 150 FNEVEFQTA-SGQMIDLITTHVGEKDLSKYSLPIHCRIVQYKTAYYSFYLPVAC--ALLM 206 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + + ++ +GI FQ+ DD LDC D Sbjct: 207 AGENLDNHVDVKNILIEMGIYFQVQDDYLDCFAD 240 >gi|156042580|ref|XP_001587847.1| hypothetical protein SS1G_11088 [Sclerotinia sclerotiorum 1980] gi|154695474|gb|EDN95212.1| hypothetical protein SS1G_11088 [Sclerotinia sclerotiorum 1980 UF-70] Length = 220 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 14/130 (10%) Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----F 171 A++AG+ LL+ A S +L+D ++L+ ++ N+ ++G QDE + Sbjct: 2 AVLAGDFLLSRA----SVALARLRDAEVTELLATVIANL-VEGEFMQLKNTAQDEKNPVW 56 Query: 172 IDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +ET + +QK +K+ +L+ +C + A++ + + +G+NLG+ FQL DD+LD Sbjct: 57 TEETISYYLQKTYLKSASLISKSCRAAALLGGSDAVTVDAAYDYGKNLGLAFQLVDDMLD 116 Query: 230 ---CEEDLPK 236 E++L K Sbjct: 117 YTITEKELGK 126 >gi|166835923|gb|ABY90133.1| geranyl-diphosphate synthase [Glycine max] Length = 283 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 10/119 (8%) Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQ----- 163 Y ++ G+G++ + FE+++ P + ++M+ ++ +G G+ Q Sbjct: 126 YGPNIELLTGDGIVPFGFELLARPDGPASASPERVLRVMIEISRAVGSVGLQDAQYVKKT 185 Query: 164 MLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 + D +E ++ Q F+++K G C A SGAI+ S+++ ERLR FG ++G++ Sbjct: 186 LWDGGEEVQNVESMQRFVLEKRDGGLHACGAA-SGAILGGGSEDQIERLRNFGFHVGMM 243 >gi|328478740|gb|EGF48346.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus MTCC 5462] Length = 176 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 28/49 (57%) Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT AL A +GA + H S +K+ FG LG+ FQ+ DDLLD + Sbjct: 27 KTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDLLDYTQ 75 >gi|284031785|ref|YP_003381716.1| polyprenyl synthetase [Kribbella flavida DSM 17836] gi|283811078|gb|ADB32917.1| Polyprenyl synthetase [Kribbella flavida DSM 17836] Length = 367 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 43/179 (24%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---------------YDEVTAIIAGNG 122 ++E +H ++LI DD+ MD+ RRG TVH+Q + A++ + Sbjct: 88 SLELLHAFALIQDDV--MDDSATRRGSATVHVQLAHWAERQRRPVGAQFGRSAAVLLSDL 145 Query: 123 LLTYAFEIISS---PKTQLK------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173 L +A ++ P L D +RS+L + GQ D+ +E Sbjct: 146 CLVWAERMLRESGLPAESLAKALPVYDLLRSELAV-------------GQFSDLLNENSA 192 Query: 174 ETQ---VFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 V I + K+G E GA+ A S LR +G +G FQL DDLL Sbjct: 193 APSLNAVLDIARRKSGNYTVLRPLELGAVAAGCSPQVLAALRQYGTAIGEAFQLRDDLL 251 >gi|195338147|ref|XP_002035687.1| GM14833 [Drosophila sechellia] gi|195588444|ref|XP_002083968.1| GD14008 [Drosophila simulans] gi|194128780|gb|EDW50823.1| GM14833 [Drosophila sechellia] gi|194195977|gb|EDX09553.1| GD14008 [Drosophila simulans] Length = 338 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++LLQ +++Q + GK+ RS L + ++G ++ Sbjct: 21 DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQ 66 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H SL+ DD+ DN +RRG P H Y + I A N L A E + Sbjct: 67 MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEAT 124 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L L G++ + +D F E+ ++ KTG L A + Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226 M S N KE LG+ FQ+ DD Sbjct: 175 MQLFSSN-KEDYSKLTAILGLYFQIRDD 201 >gi|30795079|ref|NP_851529.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces rochei] gi|30698452|dbj|BAC76565.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces rochei] Length = 439 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 36/243 (14%) Query: 16 IDTILDDLLLQTASHMQTQH----NDRLLSAIRYALLGGKKIRSFLVT----ECASLFNV 67 + +LD+ L + +T D R+ L GGK+ R+ L CA Sbjct: 68 VGRVLDEALAERLRRARTADPLFARDVAERMTRFTLEGGKRTRAQLAWWASRACAGRDAA 127 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------Y 111 AL++GAA+E + +L+HDD+ MD +RRG+PT+H + + Sbjct: 128 VAAAALQIGAALELLQTCALVHDDV--MDRATLRRGRPTLHTELASGHEDRVGPERARRF 185 Query: 112 DEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170 + A++AG+ L +A ++++ +P K + +L + M+ GQ LD+ + Sbjct: 186 GQSAAVLAGDLALAWADDLVAETPLAVWKAVVVRRLWSDMRTE-----MVAGQYLDLHGQ 240 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE----RLRCFGENLGIIFQLADD 226 + + ++ E + A + RL G G+ FQL DD Sbjct: 241 ATAARSLARALRAACLKSALYSVERPLALGAAVAGADDVTLRRLCDAGRCAGMAFQLRDD 300 Query: 227 LLD 229 L D Sbjct: 301 LDD 303 >gi|71027225|ref|XP_763256.1| prenyl transferase [Theileria parva strain Muguga] gi|68350209|gb|EAN30973.1| prenyl transferase, putative [Theileria parva] Length = 453 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 11/162 (6%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ + E IH SLIHDD+ +D +RR + H ++ +++ G+ LL+ + +II+S Sbjct: 165 KLNISYELIHIGSLIHDDI--IDESDVRRNLMSSHKKFGVKFSVLFGDFLLSKSAQIITS 222 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + NI+ LS T + + G L L+ D ++ + ++ I +KT +L+ Sbjct: 223 LQ-----NIKLVDKLSNTLDNLIHGELMYVNLNNNDLYL--SYLYKIY-LKTASLISNNI 274 Query: 194 ESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDL 234 S + + + + E L G ++G+ FQ+ DDLLD +L Sbjct: 275 SSVSHLTNQYNFQLDELLYIIGVHIGLSFQMCDDLLDYNSNL 316 >gi|68489506|ref|XP_711426.1| hypothetical protein CaO19.6674 [Candida albicans SC5314] gi|46432727|gb|EAK92197.1| hypothetical protein CaO19.6674 [Candida albicans SC5314] gi|238882748|gb|EEQ46386.1| hypothetical protein CAWG_04735 [Candida albicans WO-1] Length = 332 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 21/168 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF---EI 130 R+ I H SL+ DD+ D+ RRG P H++Y T I GN + A + Sbjct: 63 RISEIISVFHNSSLLIDDIE--DDSKYRRGVPVAHVKYGIPTTINCGNLMYFVALQQAQQ 120 Query: 131 ISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQ--------DEFIDETQVFMIQ 181 +S P ++ + SQ+++ L + GQ LDI ++ D + + Sbjct: 121 LSGPHGSMEVKFKSSQILID-----ELLNLHRGQGLDIYWRDYLKKLEKLPDVEEYLEMI 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K KTG L A + ++ + +N++ L +GI++Q+ DD L+ Sbjct: 176 KDKTGGLFRLAIKLLSLYSDVKENDQ--LISLANLMGILYQVRDDYLN 221 >gi|24660002|ref|NP_523958.2| quemao, isoform A [Drosophila melanogaster] gi|281365769|ref|NP_001163370.1| quemao, isoform B [Drosophila melanogaster] gi|7295252|gb|AAF50574.1| quemao, isoform A [Drosophila melanogaster] gi|17946375|gb|AAL49221.1| RE65121p [Drosophila melanogaster] gi|272455081|gb|ACZ94641.1| quemao, isoform B [Drosophila melanogaster] Length = 338 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++LLQ +++Q + GK+ RS L + ++G ++ Sbjct: 21 DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQ 66 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H SL+ DD+ DN +RRG P H Y + I A N L A E + Sbjct: 67 MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEAT 124 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L L G++ + +D F E+ ++ KTG L A + Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226 M S N KE LG+ FQ+ DD Sbjct: 175 MQLFSSN-KEDYSKLTAILGLYFQIRDD 201 >gi|115373108|ref|ZP_01460410.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca DW4/3-1] gi|115369864|gb|EAU68797.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca DW4/3-1] Length = 401 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 84/205 (40%), Gaps = 36/205 (17%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVG---------AAIECIHCYSLIHDDLPSM 95 YAL K++R LV HLT G A +E +H + LIHDD+ Sbjct: 99 YALRPAKRLRPVLVVAG------YHLTRGGAGVPPGLWQFAAGLELLHTFLLIHDDV--A 150 Query: 96 DNGYIRRGKPTVH-----IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149 D +RRG +H + E A++ G+ L A E + + L+ ++ Q L+ Sbjct: 151 DRADLRRGGAALHHLLAPGRAGEDLAVVVGDHLFARAMEAMLG--SGLRGAAKACQYYLA 208 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL------MCFACESGAIMAHAS 203 + + GQ LD+ V + Q ++ L C GAI+A A Sbjct: 209 VCRHTA-----AGQYLDLDLSRAALADVGLFQALRVAHLKTARYGFCAPLVCGAILAEAD 263 Query: 204 QNEKERLRCFGENLGIIFQLADDLL 228 + + L G G+ +QL DD+L Sbjct: 264 EALCQGLERVGRYGGLAYQLRDDVL 288 >gi|310824306|ref|YP_003956664.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca DW4/3-1] gi|309397378|gb|ADO74837.1| Geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca DW4/3-1] Length = 366 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 37/244 (15%) Query: 7 SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 + LQ +I+ L +L L + + ++ ++ YAL K++R LV Sbjct: 25 TWLQLVQAQIEASLAELFELPDEACLDSRWKQAMVRTRAYALRPAKRLRPVLVVAG---- 80 Query: 66 NVNHLTALRVG---------AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-----IQY 111 HLT G A +E +H + LIHDD+ D +RRG +H + Sbjct: 81 --YHLTRGGAGVPPGLWQFAAGLELLHTFLLIHDDV--ADRADLRRGGAALHHLLAPGRA 136 Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDE 170 E A++ G+ L A E + + L+ ++ Q L++ + GQ LD+ Sbjct: 137 GEDLAVVVGDHLFARAMEAMLG--SGLRGAAKACQYYLAVCRHTA-----AGQYLDLDLS 189 Query: 171 FIDETQVFMIQKMKTGAL------MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 V + Q ++ L C GAI+A A + + L G G+ +QL Sbjct: 190 RAALADVGLFQALRVAHLKTARYGFCAPLVCGAILAEADEALCQGLERVGRYGGLAYQLR 249 Query: 225 DDLL 228 DD+L Sbjct: 250 DDVL 253 >gi|194747643|ref|XP_001956261.1| GF24684 [Drosophila ananassae] gi|190623543|gb|EDV39067.1| GF24684 [Drosophila ananassae] Length = 338 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++LLQ +++Q + GK+ RS L + ++G ++ Sbjct: 21 DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPAEKLAQIGDIVQ 66 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H SL+ DD+ DN +RRG P H Y + I A N L A E + Sbjct: 67 MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGHPEAT 124 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L L G++ + +D F E+ ++ KTG L A + Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226 M S N KE LG+ FQ+ DD Sbjct: 175 MQLFSSN-KEDYSKLTAILGLYFQIRDD 201 >gi|328949593|ref|YP_004366928.1| Polyprenyl synthetase [Marinithermus hydrothermalis DSM 14884] gi|328449917|gb|AEB10818.1| Polyprenyl synthetase [Marinithermus hydrothermalis DSM 14884] Length = 327 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 24/196 (12%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GGK +R L+ A AL AA+E + LIHDD+ D +RRG+ Sbjct: 34 YPERGGKLLRGQLLLATAQAHGAPPERALPAAAALELFQNWVLIHDDI--EDASEMRRGR 91 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 PT+H Y A+ AG+ L + ++ + P L++ R ++ T Sbjct: 92 PTLHRLYSVPLALNAGDALHAVMWRVLLEAAYPTPVLQEFAR---LVETTAR-------- 140 Query: 162 GQMLD---IQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GQ LD I+ E D E + M+++ + GA++ A G Sbjct: 141 GQHLDLAWIEAERFDLSPEDYLEMVRQKAAYYTAVAPLKLGALV--AGHTPHPAFEPAGL 198 Query: 216 NLGIIFQLADDLLDCE 231 LG+ FQ+ DD+L+ E Sbjct: 199 QLGVAFQIIDDVLNLE 214 >gi|19074981|ref|NP_586487.1| FARNESYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon cuniculi GB-M1] gi|19069706|emb|CAD26091.1| FARNESYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon cuniculi GB-M1] Length = 292 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 27/226 (11%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALR 74 I I+ +LQ +S +L + Y L GGK++R N + L Sbjct: 2 IKEIVKSRILQMSSEYSKPE---VLFLLDYNLGGGKELRYKAYVHVLKALNGEVSMENLI 58 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +G ++E + LI DD+ MDN IRRGKP +++ G + AF ++ + Sbjct: 59 MGYSVELLQAVLLIVDDI--MDNSKIRRGKPCYYLK--------RGMKTVKDAFFLLGAI 108 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 + L + ++ S+ G + + E+ ET V I + KTGA + Sbjct: 109 RKLLSEKMKKPYSDSVFKTC--LGQTHDTIRKTRSEYSLETYV-AIAESKTGAYTFYL-- 163 Query: 195 SGAIMAHASQNEKERLRCFGE--NLG-IIFQLADDLLDCEEDLPKK 237 A++ + + N+ E C + NLG +IFQ+ DD L+ LP+K Sbjct: 164 -PAVLGYVAANKAEP-ACLWDFCNLGALIFQMQDDYLNF---LPEK 204 >gi|289619215|emb|CBI54483.1| unnamed protein product [Sordaria macrospora] Length = 347 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 31/232 (13%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL----LGGKKIRSFLVTECASLF------NVNH 69 L++ LL+ A + +++LS + +L LGGK R V + AS+ + Sbjct: 17 LEEALLEYAKAYKLP--EQMLSWYKQSLEVNALGGKCNRGMSVPDSASILLGRPLTEEEY 74 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A +G E + + L+ DD+ MD+ RRGKP ++Q E ++A N Sbjct: 75 FQAATLGWMTELLQAFFLVSDDI--MDSSITRRGKPCWYLQ--EGVGMVAINDAFMLESA 130 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---------QDEFIDETQVFMI 180 I + K K + R L L H + Q + GQ+ D+ D F + F++ Sbjct: 131 IYTLLKKYFKSHPRYVDFLELFHEVTFQTEM-GQLCDLLTAPEDKVDLDNFSMDKYTFIV 189 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLD 229 + A F M E L+ + LG FQ+ DD LD Sbjct: 190 --IYKTAYYSFYLPVALAMYMLDIATPENLKQAEDILIPLGEYFQVQDDYLD 239 >gi|195492530|ref|XP_002094031.1| GE21608 [Drosophila yakuba] gi|194180132|gb|EDW93743.1| GE21608 [Drosophila yakuba] Length = 338 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++LLQ +++Q + GK+ RS L + ++G ++ Sbjct: 21 DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQ 66 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H SL+ DD+ DN +RRG P H Y + I A N L A E + Sbjct: 67 MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEAT 124 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L L G++ + +D F E+ ++ KTG L A + Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226 M S N KE LG+ FQ+ DD Sbjct: 175 MQLFSTN-KEDYSKLTAILGLYFQIRDD 201 >gi|46117498|ref|XP_384767.1| hypothetical protein FG04591.1 [Gibberella zeae PH-1] Length = 368 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 28/208 (13%) Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 +H + + + + Y L L GK +RS ++ + + I +H SL+ DD Sbjct: 29 ARHEEIIRAPLTYLLNLPGKDVRSKMIAAFNQWLKIPEDKLDVIKRIIMLLHNASLLLDD 88 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD----NIRSQLM 147 + D+ +RRG P H + I A N YAF + +L D I ++ + Sbjct: 89 I--QDSSKLRRGLPVSHSIFGIAQTINAAN----YAFFLAQQELPKLGDARAFEIFTEEL 142 Query: 148 LSLTHNIGLQGMLGGQMLDI--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L L GQ +DI +D I E + F + KTG L A + +M AS Sbjct: 143 LHLHR---------GQGMDIYWRDASICPTEEEYFTMVSNKTGGLFRLAVK---LMQLAS 190 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE 231 +++K+ + LG+IFQ+ DD L+ + Sbjct: 191 ESDKDYVPLVNV-LGVIFQIRDDYLNLQ 217 >gi|118465792|ref|YP_883046.1| polyprenyl synthetase [Mycobacterium avium 104] gi|118167079|gb|ABK67976.1| polyprenyl synthetase [Mycobacterium avium 104] Length = 392 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 28/172 (16%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------EVTAIIAGN 121 + E +H ++L+ DD+ MD RRG+P H+Q+ E AI+ G+ Sbjct: 117 SFELLHAFALLQDDV--MDGAQERRGRPAAHLQFGRWHQDRGLSGSPRRFGESAAILLGD 174 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDET---QV 177 L +A +++ + + +L + ++ L GQ D+ ++ V Sbjct: 175 LCLIWAEQMLRDSGLEAR-----RLQRAFPRYDAMRVELAVGQFADLTNDIRQSPGLDAV 229 Query: 178 FMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + K+G E GA MA RL +G +G FQL DD+L Sbjct: 230 LEVARRKSGNYTVRRPLEIGATMAGCDDRTVARLSRYGAAVGEAFQLRDDVL 281 >gi|2944400|gb|AAC05273.1| geranylgeranyl pyrophosphate synthase [Drosophila melanogaster] Length = 338 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++LLQ +++Q + GK+ RS L + ++G ++ Sbjct: 21 DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQ 66 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H SL+ DD+ DN +RRG P H Y + I A N L A E + Sbjct: 67 MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEAT 124 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L L G++ + +D F E+ ++ KTG L A + Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226 M S N KE LG+ FQ+ DD Sbjct: 175 MQLFSSN-KEDYSKLTAILGLYFQIRDD 201 >gi|50355599|dbj|BAD29965.1| Phoma betae geranylgeranyl diphosphate synthase Length = 343 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 19/181 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R+ L+ V + +G + +H SL+ DD+ DN +RRGKP Sbjct: 68 GKEVRTLLLACFDEWLQVPPESLEVIGQVVRMLHTASLLIDDI--QDNSELRRGKPVAQN 125 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + I + N + A E ++S K +I ++ +L L GQ +D+ Sbjct: 126 IFGTALTINSANYVYFLALEKLNSLKNPNITDIFTEELLRLHR---------GQAMDLYW 176 Query: 168 QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D E + F + KTG L M A + L E LG+IFQ+ D Sbjct: 177 RDTLTCPTEEEYFEMVANKTGGLFRLMYR----MMKAESSMPIDLLPVVELLGVIFQVVD 232 Query: 226 D 226 D Sbjct: 233 D 233 >gi|303233112|ref|ZP_07319785.1| polyprenyl synthetase [Atopobium vaginae PB189-T1-4] gi|302480697|gb|EFL43784.1| polyprenyl synthetase [Atopobium vaginae PB189-T1-4] Length = 379 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 17/167 (10%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +R+ A+E +LIHDD+ D +RRG P ++ + AI G+ L A ++I Sbjct: 111 VRLACALELFQAAALIHDDI--ADESLVRRGNPCLYRTHGTGLAINMGDCALVDASKLIC 168 Query: 133 SPKTQ-LKDNIRSQLM---LSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKM 183 + + L N QL+ L++ + GQ LD+ + + + ++ ++ Sbjct: 169 TLSAEGLPSNAALQLLDEFLTMERTT-----IEGQALDLGWSRARTWNLAPSDYLVMAEL 223 Query: 184 KTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT + GA+ A A + + LR FG G+ FQL DD L+ Sbjct: 224 KTAHYSLASPLVLGALFAQAPKALCDALREFGCAAGVAFQLRDDYLN 270 >gi|119606491|gb|EAW86085.1| prenyl (decaprenyl) diphosphate synthase, subunit 1, isoform CRA_b [Homo sapiens] Length = 306 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 9/85 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDASSRR 190 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYA 127 GK TV+ + E A++AG+ +L+ A Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAA 215 >gi|39645583|gb|AAH63635.1| PDSS1 protein [Homo sapiens] Length = 306 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 9/85 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDASSRR 190 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYA 127 GK TV+ + E A++AG+ +L+ A Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAA 215 >gi|154304670|ref|XP_001552739.1| hypothetical protein BC1G_08074 [Botryotinia fuckeliana B05.10] gi|150853974|gb|EDN29166.1| hypothetical protein BC1G_08074 [Botryotinia fuckeliana B05.10] Length = 220 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 14/130 (10%) Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----F 171 A++AG+ LL+ A S +L+D ++L+ ++ N+ ++G QDE + Sbjct: 2 AVLAGDFLLSRA----SVALARLRDAEVTELLATVIANL-VEGEFMQLKNTAQDEKNPVW 56 Query: 172 IDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +ET + +QK +K+ +L+ +C + A++ + + +G+NLG+ FQL DD+LD Sbjct: 57 TEETISYYLQKTYLKSASLISKSCRAAALLGGSDGVTVDAAYDYGKNLGLAFQLVDDMLD 116 Query: 230 ---CEEDLPK 236 E++L K Sbjct: 117 YTISEKELGK 126 >gi|146303474|ref|YP_001190790.1| polyprenyl synthetase [Metallosphaera sedula DSM 5348] gi|145701724|gb|ABP94866.1| Polyprenyl synthetase [Metallosphaera sedula DSM 5348] Length = 279 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 75/191 (39%), Gaps = 24/191 (12%) Query: 44 RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 +Y + GK+ R L+ A A E +H SL DD+ D IRRG Sbjct: 32 KYIMRDGKRFRGTLMFLFNGALGGEEKDAYPGALATEILHSASLALDDIVDYDE--IRRG 89 Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGG 162 Y I N L+ A IIS + +R + L +G L+ M G Sbjct: 90 MKAAWAVYTNRKVIFVSNYLIPTALSIISGYGDK---ALRISVDLWKDTAVGALKDMYGK 146 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF---GENLGI 219 DE V I+ +KT +L +++ S E L G++LGI Sbjct: 147 ----------DEDYVRTIE-LKTASLFKLPT----MLSSFSSGRSEFLDTLMEAGKDLGI 191 Query: 220 IFQLADDLLDC 230 I+QL DD +DC Sbjct: 192 IYQLIDDYVDC 202 >gi|41409167|ref|NP_962003.1| IdsA2_2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397987|gb|AAS05617.1| IdsA2_2 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 382 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 28/172 (16%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------EVTAIIAGN 121 + E +H ++L+ DD+ MD RRG+P H+Q+ E AI+ G+ Sbjct: 107 SFELLHAFALLQDDV--MDGAQERRGRPAAHLQFGRWHQDRGLSGSPRRFGESAAILLGD 164 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDET---QV 177 L +A +++ + + +L + ++ L GQ D+ ++ V Sbjct: 165 LCLIWAEQMLRDSGLEAR-----RLQRAWPRYDAMRVELAVGQFADLTNDIRQSPGLDAV 219 Query: 178 FMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + K+G E GA MA RL +G +G FQL DD+L Sbjct: 220 LEVARRKSGNYTVRRPLEIGATMAGCDDRTVARLSRYGAAVGEAFQLRDDVL 271 >gi|329897187|ref|ZP_08271927.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium IMCC3088] gi|328921342|gb|EGG28736.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium IMCC3088] Length = 361 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 14/179 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L A + + A AA+E +H SL+HDDL D+ RRG+ T Sbjct: 71 GKHLRGKLAYSAARQYGSSSQAASSWAAAVELLHNASLVHDDLCDKDSK--RRGQQTTFR 128 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 QY E A+ G+ L+ A+E + R+ + + ++GGQ + Sbjct: 129 QYGEAVAVCLGDYLIAKAYEFAA----------RAGAESLHLLSSSISALVGGQAAEFAS 178 Query: 170 E-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + ++ I KT L+ A++ S E E L + + + FQ+ +D+ Sbjct: 179 AGYPAWSEYEQIAVSKTAPLLGMGVVGAALINQQSAPEAE-LEHYFYHAALCFQMINDI 236 >gi|258653364|ref|YP_003202520.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233] gi|258556589|gb|ACV79531.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233] Length = 377 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 39/211 (18%) Query: 49 GGKKIRS-FLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 GGK++R FL C L T L+V AA+E + +L+HDD+ +D R Sbjct: 56 GGKRLRPQFL--WCGWLAGGGAATGPDADAVLQVAAALELLQACALLHDDI--IDRSQRR 111 Query: 102 RGKPTVH-----------IQYDE-----VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 RG+P+ H + D AI+ G+ L + ++ + L R+ Sbjct: 112 RGRPSTHRAVAKRAADAGVAADPEHHGVSVAILLGDLALAWCDDLFLAGALPLGAAHRAA 171 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQ-------DEFIDETQVFMIQKMKTGALMC-FACESGA 197 + +L GQ+LD+ D E + + KT A GA Sbjct: 172 PVWRAMRT----EVLAGQLLDLAVTVSAEADPATQERDAMRVNRYKTAAYTIERPLHLGA 227 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +A A+ LR +G ++G+ FQL DDLL Sbjct: 228 ALAGAAPATIAALRTYGTDIGVAFQLRDDLL 258 >gi|254776305|ref|ZP_05217821.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291] Length = 369 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 28/172 (16%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------EVTAIIAGN 121 + E +H ++L+ DD+ MD RRG+P H+Q+ E AI+ G+ Sbjct: 94 SFELLHAFALLQDDV--MDGAQERRGRPAAHLQFGRWHQDRGLSGSPRRFGESAAILLGD 151 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDET---QV 177 L +A +++ + + +L + ++ L GQ D+ ++ V Sbjct: 152 LCLIWAEQMLRDSGLEAR-----RLQRAFPRYDAMRVELAVGQFADLTNDIRQSPGLDAV 206 Query: 178 FMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + K+G E GA MA RL +G +G FQL DD+L Sbjct: 207 LEVARRKSGNYTVRRPLEIGATMAGCDDRTVARLSRYGAAVGEAFQLRDDVL 258 >gi|313140540|ref|ZP_07802733.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium bifidum NCIMB 41171] gi|313133050|gb|EFR50667.1| probably bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium bifidum NCIMB 41171] Length = 365 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 24/176 (13%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT---------AIIAGNGL 123 L + AIE +L+HDD+ +D+ +RRGKP H + I+ G+ L Sbjct: 86 LDLACAIEVFQTAALVHDDI--IDDSDLRRGKPAAHKALGTTSHSASLGRGLGIMLGDLL 143 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 T + +I + ++ R +++S + + +G Q+LD+ E +DE + + Sbjct: 144 ATASVDIAHAAAQRMP---RPDMIVSTFLRMHREVEIG-QVLDLAVELSPLDEPERLARE 199 Query: 182 KM-----KTGALMCFACESGAIMAHASQNEKERLRC--FGENLGIIFQLADDLLDC 230 M KT + A A++A + G LG FQLADDLLD Sbjct: 200 SMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADAMAIGLPLGQAFQLADDLLDV 255 >gi|320583113|gb|EFW97329.1| Farnesyl pyrophosphate synthase [Pichia angusta DL-1] Length = 351 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 27/207 (13%) Query: 37 DRLLSAI-RYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 +R LS + YALL G K F E TA+ +G A+E + Y L+ DD+ Sbjct: 52 NRGLSVVDTYALLKGYKSFDDFEPEEYKK-------TAI-LGWAVELLQAYFLVADDM-- 101 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD RRG+P + + D V I + + A + K KD+ L L L H + Sbjct: 102 MDKSITRRGQPCWY-RVDGVNEIAINDSFMLEAAIYVLLKKYFRKDSYYVDL-LELFHEV 159 Query: 155 GLQGMLGGQMLDI---QDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNE 206 Q LG Q+LD+ ++ +D ++ + I KT A F M A ++ Sbjct: 160 TFQTELG-QLLDLLTAPEDHVDLSKFSLSKHSFIVTFKT-AYYSFYLPVALAMYMAGVSD 217 Query: 207 KERLRCFGE---NLGIIFQLADDLLDC 230 ++ L+ + LG FQ+ DD LDC Sbjct: 218 EKDLKQAQDVLIPLGEYFQIQDDYLDC 244 >gi|310287739|ref|YP_003938997.1| Polyprenyl synthetase [Bifidobacterium bifidum S17] gi|311064626|ref|YP_003971351.1| polyprenyl synthase IdsA [Bifidobacterium bifidum PRL2010] gi|309251675|gb|ADO53423.1| Polyprenyl synthetase [Bifidobacterium bifidum S17] gi|310866945|gb|ADP36314.1| IdsA Polyprenyl synthase [Bifidobacterium bifidum PRL2010] Length = 365 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 24/176 (13%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT---------AIIAGNGL 123 L + AIE +L+HDD+ +D+ +RRGKP H + I+ G+ L Sbjct: 86 LDLACAIEVFQTAALVHDDI--IDDSDLRRGKPAAHKALGTTSHSASLGRGLGIMLGDLL 143 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 T + +I + ++ R +++S + + +G Q+LD+ E +DE + + Sbjct: 144 ATASVDIAHAAAQRMP---RPDMIVSTFLRMHREVEIG-QVLDLAVELSPLDEPERLARE 199 Query: 182 KM-----KTGALMCFACESGAIMAHASQNEKERLRC--FGENLGIIFQLADDLLDC 230 M KT + A A++A + G LG FQLADDLLD Sbjct: 200 SMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADAMAIGLPLGQAFQLADDLLDV 255 >gi|269956783|ref|YP_003326572.1| polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269305464|gb|ACZ31014.1| Polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 365 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 46/216 (21%) Query: 49 GGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 GGK++R+ + +R GAA+E +L+HDD+ MD RRG Sbjct: 49 GGKRLRAAFAYWSFRAHGGADAGPEREAVVRTGAALELFQAAALLHDDV--MDASDTRRG 106 Query: 104 KPTVH----------------IQYDEVTAIIAGN-GLLTYAFEIISS----PKTQLK--- 139 +PT H +++ E AI+ G+ L+ EI + P+ + + Sbjct: 107 QPTAHRAFEARHATAGWAGEPVRFGESAAILLGDLCLVATQREIAEALAPLPRERAEAVR 166 Query: 140 ---DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES- 195 D ++S++++ ++ +Q G D DE + + + KT ++ Sbjct: 167 AAFDTMQSEVIVGQYLDVLVQAEPWG-----LDPHADEERARAVIRAKT---TSYSVRQP 218 Query: 196 ---GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA++A A+ + + G LG FQL DD+L Sbjct: 219 LVVGALIAGATPAQVAAVAAVGLPLGEAFQLRDDVL 254 >gi|224283386|ref|ZP_03646708.1| bifunctional short chain isoprenyl diphosphate synthase [Bifidobacterium bifidum NCIMB 41171] Length = 359 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 35/211 (16%) Query: 49 GGKKIRSFLVTECASLFNV-----------NHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 GGK++R+ L + L + AIE +L+HDD+ +D+ Sbjct: 45 GGKRLRALLALHAFDATDPQGHDDDDAHARRRDAVLDLACAIEVFQTAALVHDDI--IDD 102 Query: 98 GYIRRGKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 +RRGKP H + I+ G+ L T + +I + ++ R +++ Sbjct: 103 SDLRRGKPAAHKALGTTSHSASLGRGLGIMLGDLLATASVDIAHAAAQRMP---RPDMIV 159 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM-----KTGALMCFACESGAIMAH 201 S + + +G Q+LD+ E +DE + + M KT + A A++A Sbjct: 160 STFLRMHREVEIG-QVLDLAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLAS 218 Query: 202 ASQNEKERLRC--FGENLGIIFQLADDLLDC 230 + G LG FQLADDLLD Sbjct: 219 GRDPRRAHADAMAIGLPLGQAFQLADDLLDV 249 >gi|51469024|emb|CAH18006.1| geranylgeranyl diphosphate synthase [Gibberella intermedia] Length = 343 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 18/196 (9%) Query: 41 SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 S Y L L K IR + V + I +H SLI DD DN Sbjct: 98 SPYNYILTLPSKGIRGAFIDSLNVWLEVPEDKTSVIKEVIGMLHNSSLIIDDF--QDNSP 155 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRGKP+ H + AI ++ A E +++D + + +T I + Sbjct: 156 LRRGKPSTHTVFGPAQAINTATYVIVKAIE-------KIQDIVSHDALADVTGMI--TSI 206 Query: 160 LGGQMLDIQ---DEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEK--ERLRCF 213 GQ +D+ + + Q +++ KTGAL + E A+ + AS ++ E L Sbjct: 207 FQGQAMDLWWTANGIVPSIQEYLLMVNDKTGALFRLSLELLALNSEASISDSTLESLSSV 266 Query: 214 GENLGIIFQLADDLLD 229 LG FQ+ DD ++ Sbjct: 267 VSLLGQYFQIRDDYMN 282 >gi|320096193|ref|ZP_08027782.1| polyprenyl synthetase [Actinomyces sp. oral taxon 178 str. F0338] gi|319976874|gb|EFW08628.1| polyprenyl synthetase [Actinomyces sp. oral taxon 178 str. F0338] Length = 364 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 29/160 (18%) Query: 33 TQHNDRLLSAIRYALLGGKKIRSFL--VTEC-ASLFNVNHLTALRVGAAIECIHCYSLIH 89 TQ L S R GGK+ R L V C A ++ + AA+E +L H Sbjct: 33 TQRGAPLASLARSCSEGGKRFRGILAHVGHCLARGGPLDEAPVAPLSAALELYQASALAH 92 Query: 90 DDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISS 133 DD+ +D+ RRG+PT H+ ++ E AI+ G+ L ++A ++ Sbjct: 93 DDI--IDHARTRRGRPTPHVSLAALHHDRAWRGDPDRFGEAGAILVGDLLFSWAEAAMAD 150 Query: 134 PKTQL--KDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDE 170 +L +D R S H + L GQ LD+ E Sbjct: 151 QADRLAPRDAARLWARYSRMHAEVAL-----GQFLDVAAE 185 >gi|119167462|gb|AAY33489.2| putative mitochondrial isoprenyl diphosphate synthase precursor [Megoura viciae] Length = 394 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 31/217 (14%) Query: 39 LLSAIRYALLGGKKIR------SF-LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 L ++Y + GGKK R SF ++ A + N + +G +E + Y L+ DD Sbjct: 85 LAKMLQYNVPGGKKNRGLALVLSFKMLASPADQTDENLRLSYILGWCVEILQAYQLVLDD 144 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149 + MDN RRG+P + +++++ + +G+L +++I K KD +L Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGILLEQTIYQLI---KMYFKDKPYYTHILE 198 Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199 L +++ ++ +G Q LD+ +++ E ++ K KT A F M Sbjct: 199 LFYDVAMKTAMG-QCLDMLAANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAM 255 Query: 200 AHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233 + N+ E R +G FQ+ DD LDC D Sbjct: 256 RMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292 >gi|209570224|emb|CAP74388.1| geranylgeranyl diphosphate synthase [Gibberella intermedia] Length = 393 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 18/196 (9%) Query: 41 SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 S Y L L K IR + +V A + I+ +H SLI DD D Sbjct: 98 SPYNYILTLPSKGIRGAFIDSLNVWLDVPEDKAQVIKDVIDMLHNSSLIIDDF--QDGSP 155 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRGKP+ H + AI ++ A E ++++ + + +T I + Sbjct: 156 LRRGKPSTHTVFGPAQAINTATYIIVKAIE-------RIQEIVSHDALADITGTIT--TI 206 Query: 160 LGGQMLDIQ---DEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHA--SQNEKERLRCF 213 GQ +D+ + + Q +++ KTGAL + E A+ + A S + E L Sbjct: 207 FQGQAMDLWWTANTILQSIQEYLLMVNDKTGALFRLSLELLALNSEAPISDSTLESLSSV 266 Query: 214 GENLGIIFQLADDLLD 229 LG FQ+ DD ++ Sbjct: 267 VSLLGQYFQIRDDYMN 282 >gi|119476621|ref|ZP_01616931.1| Farnesyltranstransferase [marine gamma proteobacterium HTCC2143] gi|119449877|gb|EAW31113.1| Farnesyltranstransferase [marine gamma proteobacterium HTCC2143] Length = 311 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 14/154 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK R+ L ++ L AA E +H SLIHDD+ D RRG+ ++H Sbjct: 34 GKSFRAQLALSSGCSLGLSTTDNLHWAAACELLHNASLIHDDIS--DASTHRRGQESIHQ 91 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + A+ G+ ++ AFE+ + +++ ++++L +Q GQ+ DI Sbjct: 92 HFGADMALCLGDWMVAKAFELGA------RNSQHGSVLVALLAQ-AMQATCSGQIADISQ 144 Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 Q +DE Q I KT L+ A+ A Sbjct: 145 RQCAGLDEWQC--IATGKTAPLLIAPIRGAAVAA 176 >gi|50955160|ref|YP_062448.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951642|gb|AAT89343.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 372 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 26/178 (14%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV--------TAIIAGNGLLTY 126 V +A+E H +L+HDDL +DN RRG P+VH +++ + G G T Sbjct: 86 VASALELFHAAALVHDDL--IDNSDTRRGAPSVHRRFESLHDSEKWSGCGKSFGTGAATL 143 Query: 127 AFEIISSPKTQLKDNIRSQLM-------LSLTHNIGLQGMLGGQMLDIQDEFI-----DE 174 +++ +L + Q + N + GQ LD+ +E D Sbjct: 144 LGDLLLILSDELFEEGIGQTVSPAARRAARAEFNRMRIDVTAGQYLDLFEEIGWAGRHDA 203 Query: 175 TQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 Q+ +++ ++ ES GA +A A+ + + L FG LGI +QL DDLL Sbjct: 204 DQLARAERVIVYKSAKYSIESPLLIGASLAGANVGQLDALGGFGLPLGIAYQLRDDLL 261 >gi|158334022|ref|YP_001515194.1| polyprenyl synthetase [Acaryochloris marina MBIC11017] gi|158304263|gb|ABW25880.1| polyprenyl synthetase [Acaryochloris marina MBIC11017] Length = 298 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 6/184 (3%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L F +L+ A+E IH L+HDD+ DN R PT+ Sbjct: 2 GKGLRPALCMATCQAFGGTEEQSLKSAVALEMIHNAFLVHDDVE--DNSECRHRMPTLQA 59 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--GLQGMLG--GQML 165 + A+ G+ + + ++ L + ++ H + L+G G + Sbjct: 60 EQGVPIAVNIGDAMNALSLRLVRENIPMLGHQLTQRIYEEFEHLMLKSLEGQASELGWVR 119 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 D + + + + MI C G ++A + +R FG +G FQ+ D Sbjct: 120 DNRCDITEADYLQMILNKTCWYSFMHPCRIGGLIASKDTLDLDRFNKFGYFMGAAFQIQD 179 Query: 226 DLLD 229 D+L+ Sbjct: 180 DVLN 183 >gi|2935459|gb|AAC73051.1| farnesyl pyrophosphate synthase [Solanum lycopersicum] Length = 342 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 97/235 (41%), Gaps = 35/235 (14%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRV----- 75 DLL TA + + Y + GGK R V + SL + LTA + Sbjct: 18 DLLEDTAFEFTDDSRKWVDKMLDYNVPGGKLNRGLSVIDSLSLLKDGKELTADEIFKASA 77 Query: 76 -GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL-----TYAFE 129 G IE + Y L+ DD+ MD + RRG+P + ++V I +G+L T + Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWY-NLEKVGMIAINDGILLRNHITRILK 134 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQ 181 P++ D +L L + + Q GQM+D+ + E + I Sbjct: 135 KYFRPESYYVD------LLDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLSIHRRIV 187 Query: 182 KMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT + AC +M + ++ ++ ++GI FQ+ DD LDC D Sbjct: 188 QYKTAYYSFYLPVAC--ALLMVGENLDKHVDVKKILIDMGIYFQVQDDYLDCFAD 240 >gi|3549881|emb|CAA75568.1| geranylgeranyl diphosphate synthase [Gibberella fujikuroi] Length = 342 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 18/196 (9%) Query: 41 SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 S Y L L K IR + V + I +H SLI DD DN Sbjct: 98 SPYNYILTLPSKGIRGAFIDSLNVWLEVPEDETSVIKEVIGMLHNSSLIIDDF--QDNSP 155 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 +RRGKP+ H + AI ++ A E +++D + + +T I + Sbjct: 156 LRRGKPSTHTVFGPAQAINTATYVIVKAIE-------KIQDIVGHDALADVTGTIT--TI 206 Query: 160 LGGQMLDIQ---DEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEK--ERLRCF 213 GQ +D+ + + Q +++ KTGAL + E A+ + AS ++ E L Sbjct: 207 FQGQAMDLWWTANAIVPSIQEYLLMVNDKTGALFRLSLELLALNSEASISDSALESLSSA 266 Query: 214 GENLGIIFQLADDLLD 229 LG FQ+ DD ++ Sbjct: 267 VSLLGQYFQIRDDYMN 282 >gi|256831589|ref|YP_003160316.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603] gi|256685120|gb|ACV08013.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603] Length = 345 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 97/252 (38%), Gaps = 50/252 (19%) Query: 11 ENSKRIDTILDDLLLQTAS------HMQ--------TQHNDRLLSAIRYALLGGKKIRSF 56 E + R DT L L TAS H Q Q RL + AL +K Sbjct: 4 EPTTRPDTDLSASLSTTASAAISDFHTQLSQAHGRGRQIRPRLFLEVYAALSHREKHPHL 63 Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 VTE + V H AIE +H LIHDD+ +D+ +RRG ++ + E+ A Sbjct: 64 RVTERPEIQQVAH--------AIELLHTSFLIHDDV--IDHDTMRRGHTNINGHF-ELVA 112 Query: 117 IIAG----------------NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160 + +G G+L ++ R +L+ + I L + Sbjct: 113 LSSGASAADAHTLGNTAGILGGVLALTEALMQVAALDFPHRQRQRLLTAFQEAISLSAL- 171 Query: 161 GGQMLDIQDEFIDE----TQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGE 215 G++LD+ I T I ++KT A+MA + + L G Sbjct: 172 -GELLDVHSATIPAPTPMTDTITIAELKTAEYSFVLPMRLAAMMADDANTDA--LAGVGR 228 Query: 216 NLGIIFQLADDL 227 +LG+ +QL DDL Sbjct: 229 HLGVAYQLHDDL 240 >gi|242017538|ref|XP_002429245.1| geranylgeranyl pyrophosphate synthase, putative [Pediculus humanus corporis] gi|212514134|gb|EEB16507.1| geranylgeranyl pyrophosphate synthase, putative [Pediculus humanus corporis] Length = 313 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 16/195 (8%) Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 +++LL +Y L + GK +R L + + ++ +H SL+ DD+ Sbjct: 20 QDEKLLQPFKYILQVPGKHMREKLAKAFNYWLKIPSDKLNVIVEIVQILHNSSLLLDDI- 78 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 DN +RRG P H Y + I A N ++ A E S + ++ +L L Sbjct: 79 -QDNSVLRRGIPVAHSIYGIPSTINAANYVIFIALEKTLSLDHPNATQVYTEQLLELHRG 137 Query: 154 IGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G++ + +D F+ E++ + KTG L A +M S N+ + + Sbjct: 138 QGME-------IYWRDNFLCPSESEYKQMTMKKTGGLFMLAVR---LMQLFSDNKSDFSK 187 Query: 212 CFGENLGIIFQLADD 226 G +G+IFQ+ DD Sbjct: 188 IAGI-IGLIFQIRDD 201 >gi|302819273|ref|XP_002991307.1| hypothetical protein SELMODRAFT_236261 [Selaginella moellendorffii] gi|300140887|gb|EFJ07605.1| hypothetical protein SELMODRAFT_236261 [Selaginella moellendorffii] Length = 343 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 25/234 (10%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNV-NHLT-- 71 +DT +LL + T+ + +S + Y + GGK R V + L + L+ Sbjct: 11 VDTTDKELLADCDAFQFTRESREWVSKMLDYNVPGGKLNRGLSVIDSLVLLKSEDELSRD 70 Query: 72 ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A +G IE + Y L+ DD+ MDN + RRGKP+ Q + ++A N L Sbjct: 71 EIEQAFALGWCIEWLQAYFLVMDDI--MDNSHTRRGKPSWFKQPN--VGLVAANDALLLR 126 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---------QDEFIDETQVF 178 + + + L + Q G QMLD+ +++ ET + Sbjct: 127 NHVPRILRKYFHGQPYYFDLRELFDEVEYQTACG-QMLDLITSPAGKVDLSKYVMETYLR 185 Query: 179 MIQKMKTGALMCFACESGAI-MAHASQNEK-ERLRCFGENLGIIFQLADDLLDC 230 ++ K KT + + A+ M+ S N K E + +G FQ+ DD LDC Sbjct: 186 IV-KFKTAFYSFYLPVACALYMSGESDNSKFESAKQILLQMGTYFQIQDDFLDC 238 >gi|209525923|ref|ZP_03274457.1| Polyprenyl synthetase [Arthrospira maxima CS-328] gi|209493600|gb|EDZ93921.1| Polyprenyl synthetase [Arthrospira maxima CS-328] Length = 177 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 R+ E IH SL+HDD+ +D +RRG PTVH ++ A++AG+ L Sbjct: 72 RLAEITEMIHTASLVHDDV--VDESELRRGVPTVHSLFNNRVAVLAGDFLF 120 >gi|183984773|ref|YP_001853064.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium marinum M] gi|183178099|gb|ACC43209.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium marinum M] Length = 384 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 44/175 (25%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTY 126 H ++L+ DD+ MD RRG P VH+Q + E A++ G+ L + Sbjct: 114 HAFALLQDDV--MDQSPQRRGSPAVHVQLARCHQRRGLSGAAARFGESAAVLLGDICLVW 171 Query: 127 AFEIISSPKTQLK---------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-- 175 A +++ + + D +R +L + GQ+ D+ ++ + Sbjct: 172 AEQMLRESGVEDRRLRQVWPRYDAMRIELAV-------------GQLCDLSNDIRNLPTL 218 Query: 176 -QVFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 V + + K+G E GA MA + E+L +G+ +G FQL DD+L Sbjct: 219 DAVLDVARRKSGNYTVRRPLEMGAAMADCDERTLEQLARYGDAVGEAFQLRDDML 273 >gi|1146159|gb|AAB07264.1| farnesyl diphosphate synthase short form [Arabidopsis thaliana] Length = 343 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 89/214 (41%), Gaps = 26/214 (12%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRV------GAAIECIHCYSLIH 89 DR+L Y + GGK R V + L N LT V G IE + Y L+ Sbjct: 37 DRMLD---YNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVL 93 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ MDN RRG+P + +V + +G+L I K +D ++ Sbjct: 94 DDI--MDNSVTRRGQPC-WFRVPQVGMVAINDGILLRN-HIHRILKKHFRDKPYYVDLVD 149 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGALMCFACESGAIMAH 201 L + + LQ G QM+D+ F E + I + KT A F + Sbjct: 150 LFNEVELQTACG-QMIDLITTFEGEKDLAKYSLSIHRRIVQYKT-AYYSFYLPVACALLM 207 Query: 202 ASQNEKERL--RCFGENLGIIFQLADDLLDCEED 233 A +N + + + ++GI FQ+ DD LDC D Sbjct: 208 AGENLENHIDVKNVLVDMGIYFQVQDDYLDCFAD 241 >gi|15238801|ref|NP_199588.1| FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1); dimethylallyltranstransferase/ geranyltranstransferase [Arabidopsis thaliana] gi|21431776|sp|Q09152|FPPS1_ARATH RecName: Full=Farnesyl pyrophosphate synthase 1, mitochondrial; Short=FPP synthase 1; Short=FPS 1; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1; AltName: Full=Dimethylallyltranstransferase 1; AltName: Full=Farnesyl diphosphate synthase 1; AltName: Full=Geranyltranstransferase 1; Flags: Precursor gi|13878123|gb|AAK44139.1|AF370324_1 putative farnesyl diphosphate synthase precursor [Arabidopsis thaliana] gi|1872500|gb|AAB49290.1| farnesyl diphosphate synthase precursor [Arabidopsis thaliana] gi|7275351|gb|AAF44787.1| farnesyl diphosphate synthase long form [Arabidopsis thaliana] gi|10177913|dbj|BAB11324.1| farnesyl diphosphate synthase precursor [Arabidopsis thaliana] gi|17104795|gb|AAL34286.1| putative farnesyl diphosphate synthase precursor [Arabidopsis thaliana] gi|332008187|gb|AED95570.1| farnesyl diphosphate synthase 1 [Arabidopsis thaliana] Length = 384 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 89/214 (41%), Gaps = 26/214 (12%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRV------GAAIECIHCYSLIH 89 DR+L Y + GGK R V + L N LT V G IE + Y L+ Sbjct: 78 DRMLD---YNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVL 134 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ MDN RRG+P + +V + +G+L I K +D ++ Sbjct: 135 DDI--MDNSVTRRGQPC-WFRVPQVGMVAINDGILLRN-HIHRILKKHFRDKPYYVDLVD 190 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGALMCFACESGAIMAH 201 L + + LQ G QM+D+ F E + I + KT A F + Sbjct: 191 LFNEVELQTACG-QMIDLITTFEGEKDLAKYSLSIHRRIVQYKT-AYYSFYLPVACALLM 248 Query: 202 ASQNEKERL--RCFGENLGIIFQLADDLLDCEED 233 A +N + + + ++GI FQ+ DD LDC D Sbjct: 249 AGENLENHIDVKNVLVDMGIYFQVQDDYLDCFAD 282 >gi|62089112|dbj|BAD93000.1| trans-prenyltransferase variant [Homo sapiens] Length = 297 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 9/85 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H + V A+ E IH SL+HDD+ +D+ RR Sbjct: 140 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDASSRR 197 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYA 127 GK TV+ + E A++AG+ +L+ A Sbjct: 198 GKHTVNKIWGEKKAVLAGDLILSAA 222 >gi|134300028|ref|YP_001113524.1| geranylgeranyl pyrophosphate synthase-like protein [Desulfotomaculum reducens MI-1] gi|134052728|gb|ABO50699.1| Geranylgeranyl pyrophosphate synthase-like protein [Desulfotomaculum reducens MI-1] Length = 162 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 N L SA + GGK+IR LV VN +++ A+E +H +L HDD+ + Sbjct: 41 NHLLGSAHNLIIAGGKRIRPALVLLAGKQGLVNK-QVMQLAIAVEILHLATLTHDDI--I 97 Query: 96 DNGYIRRGKPTVH 108 DN RRGKP H Sbjct: 98 DNAATRRGKPAAH 110 >gi|54026371|ref|YP_120613.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152] gi|54017879|dbj|BAD59249.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica IFM 10152] Length = 369 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 59/252 (23%), Positives = 102/252 (40%), Gaps = 48/252 (19%) Query: 7 SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 +++++++ R+ LDD + + H+ L I + GGK +RS L S Sbjct: 27 TRMRDDTARV---LDDFVRARRREHLGAPETAVLGQVIGDFVAGGKYLRSALHLAGWSTV 83 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-------------- 111 A+R A+ E +HC++L+ DD+ MD RRG+P H+++ Sbjct: 84 APVGAAAIRAAASAELLHCFALMQDDV--MDESARRRGRPAAHVRFAQWHARQGFSGSSD 141 Query: 112 --DEVTAIIAGNGLLTYAFEIISSPKTQLK---------DNIRSQLMLSLTHNIGLQGML 160 E A +A + L +A +++ D +RS+L + Sbjct: 142 RFGESAATLAADLCLVWAEQLLRESGVDAAALARALPRYDAMRSELAV------------ 189 Query: 161 GGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGEN 216 GQ D+ ++ V + + K+G E GA +A A L +G Sbjct: 190 -GQFRDLVNDARRRPALADVLAVARAKSGHYTVRRPLELGAELAGAPPAVLAALGRYGVA 248 Query: 217 LGIIFQLADDLL 228 +G FQ+ DDLL Sbjct: 249 IGEAFQVRDDLL 260 >gi|213407468|ref|XP_002174505.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus yFS275] gi|212002552|gb|EEB08212.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus yFS275] Length = 354 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 36/240 (15%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC------ASLFNVNH 69 +D I+D L T+ ++ D ++ + LGGK R V + +L + ++ Sbjct: 25 VDEIVDYL---TSVNVPQDAKDWFKKSLYHNTLGGKYNRGLSVIDTYEILSGKALDDNSY 81 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A +G IE + + L+ DD+ MD RRG+P ++ + G+ + +F Sbjct: 82 FRAALLGWCIELLQAFFLVADDM--MDESKTRRGQPCWYLMPN------VGSIAINDSFM 133 Query: 130 IISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQ---------DEFIDETQ 176 + S+ LK + R + +L L H + Q LG Q LD+ +F + Sbjct: 134 LESAIYFLLKKHFRHETYYVDLLDLFHEVTFQTTLG-QELDLLTAPENHVDLSKFSQDKH 192 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233 F++ + A F M A+ + L+ + LG FQ+ DD LDC D Sbjct: 193 AFIV--IFKTAYYSFYLPVALAMCMANVATPDNLQRASDVLIPLGKYFQIQDDYLDCYGD 250 >gi|317013686|gb|ADU81122.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori Gambia94/24] Length = 307 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 24/168 (14%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A + +E I SL+HDD+ +D +RR P+++ + A++ G+ + AF + Sbjct: 59 AFNLCTIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185 S + + S +L L+ +I+D F+ D+ + + I + KT Sbjct: 117 SKMGESIAQAL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + +S AI+ + + FG + G+ FQ+ DDLLD +D Sbjct: 164 AHFIEASLKSMAILL---DKDAKMYADFGLHFGMAFQIIDDLLDITQD 208 >gi|320531404|ref|ZP_08032371.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337] gi|320136376|gb|EFW28357.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337] Length = 386 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 82/239 (34%), Gaps = 46/239 (19%) Query: 34 QHNDRLLSAIRYALLGGKKIRSFL-VTECASLFNVNHLT-------ALRVGAAIECIHCY 85 Q LL A L GGK++R+ L CA L A+ +GAA+E Sbjct: 35 QAAPELLGAASSVLSGGKRMRAVLGAIGCAILSAPEQRAECLTGSDAVHLGAALELYQAS 94 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDE---------VTAIIAGNGLLTYA--------- 127 +L+HDDL MD RRG P H + NG + Sbjct: 95 ALVHDDL--MDGADTRRGMPAAHRAFTRDHEARGWLGRPQTFGANGAILLGDLLLSLAGE 152 Query: 128 -FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQK 182 +S + + R+ + + GQ LD++ E + D ++ Sbjct: 153 EMSALSQSRVSCETGSRTVQYARTAFDAMTTEVALGQFLDVRSENLPLPWDREPGAAARR 212 Query: 183 MKTGALMCFACESG-------------AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 M AL ++ S E L FGE++GI FQL DD L Sbjct: 213 MHDDALSVVRHKAARYSVRHPLLIGALLAGLDPSGPTAEHLAAFGEDVGIAFQLRDDEL 271 >gi|150021241|ref|YP_001306595.1| polyprenyl synthetase [Thermosipho melanesiensis BI429] gi|149793762|gb|ABR31210.1| Polyprenyl synthetase [Thermosipho melanesiensis BI429] Length = 332 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 5/67 (7%) Query: 44 RYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 ++ L GK+IR L F V+ T ++ A IE +H + LIHDD+ MD +R Sbjct: 40 KFCLRPGKRIRPLLFILGVEGFGGKVDE-TVYKIAATIEIMHSFLLIHDDI--MDQSELR 96 Query: 102 RGKPTVH 108 RG+P++H Sbjct: 97 RGQPSMH 103 >gi|13022122|gb|AAK11650.1| unknown [Tolypothrix sp. PCC 7601] Length = 69 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 36/61 (59%) Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 E ID T + I KTGAL+ + SGA++ AS +RL + ++G+ FQ+ D++LD Sbjct: 4 ENIDITTLDYIHTHKTGALLETSVLSGALLTGASDAVLQRLSVYAHHIGLAFQIVDNVLD 63 Query: 230 C 230 Sbjct: 64 I 64 >gi|326773501|ref|ZP_08232784.1| polyprenyl synthetase [Actinomyces viscosus C505] gi|326636731|gb|EGE37634.1| polyprenyl synthetase [Actinomyces viscosus C505] Length = 364 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 86/244 (35%), Gaps = 56/244 (22%) Query: 34 QHNDRLLSAIRYALLGGKKIRSFL-VTECASLFNVNHLT-------ALRVGAAIECIHCY 85 Q LL A L GGK++R+ L CA L + A+ +GAA+E Sbjct: 13 QAAPELLEAAGSVLSGGKRMRAVLGAVGCAILSTPERRSEYLTASDAVHLGAALELYQAS 72 Query: 86 SLIHDDLPSMDNGYIRRGKPTVH------------------------IQYDEVTAIIAGN 121 +L+HDDL MD RRG P H I ++ +AG Sbjct: 73 ALVHDDL--MDGADTRRGLPAAHRVFARDHEDRGWLGRPQTFGANGAILLGDLLLSLAGE 130 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQV 177 + A SS ++T + L GQ LD++ E + D Sbjct: 131 EMSALAPSRTSSQTRGSAVRHARSAFDAMTTEVAL-----GQFLDVRSENLPLPWDREPG 185 Query: 178 FMIQKMKTGALMCFACESG-------------AIMAHASQNEKERLRCFGENLGIIFQLA 224 + M+ AL +S S E L FGE++GI FQL Sbjct: 186 AAARLMQGDALSVVRHKSARYSVRHPLLIGALLAGLDPSGATAEHLAAFGEDVGIAFQLR 245 Query: 225 DDLL 228 DD L Sbjct: 246 DDEL 249 >gi|294786992|ref|ZP_06752246.1| putative geranylgeranyl pyrophosphate synthase [Parascardovia denticolens F0305] gi|315226633|ref|ZP_07868421.1| bifunctional short chain isoprenyl diphosphate synthase [Parascardovia denticolens DSM 10105] gi|294485825|gb|EFG33459.1| putative geranylgeranyl pyrophosphate synthase [Parascardovia denticolens F0305] gi|315120765|gb|EFT83897.1| bifunctional short chain isoprenyl diphosphate synthase [Parascardovia denticolens DSM 10105] Length = 371 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 42/226 (18%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDL 92 D+ LS+ R GGK++R+ L+ + + A+ + AIE +L+HDD+ Sbjct: 45 TDQALSSSR----GGKRLRALLLCRTCQALRLPEEDWDAAIDLACAIEIFQTGALVHDDI 100 Query: 93 PSMDNGYIRRGKPTVHI--------------QYDEVTAIIAGNGLLTYAFEII--SSPKT 136 +D+ +RRG P+ H Q ++ G+ L T + ++I +S + Sbjct: 101 --IDDSDLRRGAPSAHKAFASHLLKRSSTARQDGLGLGLMLGDLLATESVDLIQEASSRL 158 Query: 137 QLKDNIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTG 186 + ++++S +M L++ + + GQ+LD+ E +D E KT Sbjct: 159 SVPESLKSVIMTAFLTMHRQVEI-----GQVLDLSMETVDLHDPASIEGGALATYVWKTA 213 Query: 187 ALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDC 230 + A A +A E E + G LG+ FQL DDL+D Sbjct: 214 SYTTIAPLRIAFLACGLDQETSHEVSQAVGLPLGVAFQLKDDLIDV 259 >gi|126306988|ref|XP_001368888.1| PREDICTED: similar to Geranylgeranyl diphosphate synthase 1 [Monodelphis domestica] Length = 299 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL RY L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 12 LLEPYRYLLQLPGKQVRTKLSQAFNHWLKVPEDKTQIIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++QK TG L A +M S N KE L+ Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQK--TGGLFGLAV---GLMQLFS-NYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 175 PLLDTLGLFFQIRDD 189 >gi|297805334|ref|XP_002870551.1| hypothetical protein ARALYDRAFT_915906 [Arabidopsis lyrata subsp. lyrata] gi|297316387|gb|EFH46810.1| hypothetical protein ARALYDRAFT_915906 [Arabidopsis lyrata subsp. lyrata] Length = 189 Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 5/81 (6%) Query: 157 QGMLGGQMLDIQDEFIDE-----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 +G++ GQ+ D+ E ++ ++ +I KT AL+ A G IM ++ E E+LR Sbjct: 25 KGLVAGQVTDLSSERLNPHDAGLERLELIHLHKTAALLEEAAILGVIMGDGTEEEIEKLR 84 Query: 212 CFGENLGIIFQLADDLLDCEE 232 + + ++FQ+ DD+LD E Sbjct: 85 KYARCIRLLFQVVDDILDVTE 105 >gi|149638233|ref|XP_001512343.1| PREDICTED: similar to Geranylgeranyl diphosphate synthase 1 [Ornithorhynchus anatinus] Length = 301 Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L NV + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKKQVIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++Q KTG L A G + +S KE L+ Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYRAMVLQ--KTGGLFGLAV--GLMQLFSSY--KEDLK 174 Query: 212 CFGENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 175 PLLDTLGLFFQIRDD 189 >gi|297562409|ref|YP_003681383.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846857|gb|ADH68877.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 350 Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 16/100 (16%) Query: 46 ALLGGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 AL GGK++R SF + + +R AA+E +H +++HDDL +D IR G Sbjct: 46 ALTGGKRLRASFCYWGWRAAGQPDSDALVRAAAAMELVHAAAVVHDDL--IDESPIRHGV 103 Query: 105 PTVHIQY-------------DEVTAIIAGNGLLTYAFEII 131 P+ H+ A++ G+ L+++A E+ Sbjct: 104 PSAHVALRAAFTGRPRPHAGSRALALLTGDLLMSWAAELF 143 >gi|325962936|ref|YP_004240842.1| geranylgeranyl pyrophosphate synthase [Arthrobacter phenanthrenivorans Sphe3] gi|323469023|gb|ADX72708.1| geranylgeranyl pyrophosphate synthase [Arthrobacter phenanthrenivorans Sphe3] Length = 364 Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 28/152 (18%) Query: 39 LLSAIRYALLGGKKIRSFL----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 L+ +I + GGK++R+ + + A GAA+E +LIHDD+ Sbjct: 43 LMGSISNLVTGGKRLRALMCYWGWRGAGGEPAAQQIVA--AGAALELFQAAALIHDDI-- 98 Query: 95 MDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQL 138 +D RRG P+VH ++ E+ AI+ G+ L+++ E + + Sbjct: 99 IDRSDTRRGGPSVHRRFTELHGSRGWALDSERFGQAAAILTGDLCLSFSEEAFTDIGERA 158 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170 R++L+ +L ++ GQ LDI +E Sbjct: 159 AAGSRARLIFNLMR----AEVMAGQYLDILEE 186 >gi|330465077|ref|YP_004402820.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] gi|328808048|gb|AEB42220.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] Length = 372 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 44/219 (20%) Query: 47 LLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 L GGK++R + A+ + L A +E +H ++L+HDD+ MD+ RRG Sbjct: 62 LAGGKRVRPTFGYWGWRGAASGDEPLHRVLPALATLELLHTFALVHDDV--MDHSATRRG 119 Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRS 144 +PT H+ ++ E A++ G+ L +A ++++ P ++L D R Sbjct: 120 RPTAHVAMAAQHAAAGRCGDSGRFGEAVAVLIGDLCLVWADQLLARAALPASRLLDVRRG 179 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGA------LMCFACE 194 + + + GQ LDI E E + + + KT + L+ A Sbjct: 180 YDRMRVE-------TIAGQYLDILGEADPENWSVDRALRVARYKTASYTVQRPLLFGASL 232 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +G + R +G +G FQL DDLL D Sbjct: 233 AGVDGGTPLTDAYTR---YGLAVGEAFQLRDDLLGVYGD 268 >gi|13021724|gb|AAK11531.1| PaxG [Penicillium paxilli] Length = 371 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 21/237 (8%) Query: 4 GLPSKLQENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 G P L ++SK TI +L+ + Q+N + + Y L + GK IRS L+ Sbjct: 40 GFPRLLSDSSKAPSTIRTVQVLEDDVDDIAIQYNKIVRGPLDYLLAIPGKDIRSKLIDSF 99 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + V I +H SL+ DD+ D +RRGKP H Y I + N Sbjct: 100 NIWLQLPEEKLSIVKDIINLLHTASLLIDDI--QDASRLRRGKPVAHDVYGVAQTINSAN 157 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFI--DETQV 177 YA+ + + ++ D ++ ++ L GQ +D+ +D + E + Sbjct: 158 ----YAYYLQQARLKEIGDPRAFEIFTRSLLDLHL-----GQGMDLYWRDMVVCPTEEEY 208 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + KTG L A + I + + + E LG+IFQ+ DD ++ + L Sbjct: 209 TRMVMYKTGGLFNLALDLMRIQSRKNTD----FSKLVELLGVIFQIRDDYMNLQSGL 261 >gi|328717612|ref|XP_001950423.2| PREDICTED: farnesyl pyrophosphate synthase-like [Acyrthosiphon pisum] Length = 396 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 27/214 (12%) Query: 37 DRLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLTA--LRV----GAAIECIHCYSLIH 89 + L + ++Y + GGK R LVT L + LT LR+ G +E + Y L+ Sbjct: 85 EWLENLLKYNVPGGKNNRGLTLVTSFKMLSTPSDLTYENLRLSYILGWCVEILQAYQLVL 144 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ MDN RRG+P + +++++ + +G+L I K KD ++ Sbjct: 145 DDI--MDNAITRRGRPCWY-RHNDIGLMAVNDGILLEQ-AIYQLLKKYFKDKPYYTHIVE 200 Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199 L +++ ++ +G Q LD+ ++F + + ++ K KT A F M Sbjct: 201 LFYDVTMKSAMG-QCLDMLTAKSFKSTKLEKFTMDNYIAIV-KYKT-AYYSFFLPVFLAM 257 Query: 200 AHASQNEKE---RLRCFGENLGIIFQLADDLLDC 230 + N++E + + +G FQ+ DD LDC Sbjct: 258 RMTNINDQEIFKQSKAILLEMGQFFQVQDDYLDC 291 >gi|302809182|ref|XP_002986284.1| hypothetical protein SELMODRAFT_425252 [Selaginella moellendorffii] gi|300145820|gb|EFJ12493.1| hypothetical protein SELMODRAFT_425252 [Selaginella moellendorffii] Length = 267 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 3/125 (2%) Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + TA R E L DDLP MDN R+G+ H+++D+ TAI+A L AF Sbjct: 132 YATAQRTKKHFEMWMAIILTTDDLPCMDNARTRKGRAAAHVEFDDTTAILAAQALAALAF 191 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 + L D +L L ++ +Q ++ GQ D++ + T+ Q+ + G L Sbjct: 192 GRVVDSTLVLADK---RLRLVKKFSLSMQRLVYGQYDDVKKGEVGNTRGTQRQEHQQGEL 248 Query: 189 MCFAC 193 + A Sbjct: 249 LLRAA 253 >gi|291243150|ref|XP_002741463.1| PREDICTED: geranylgeranyl diphosphate synthase 1-like [Saccoglossus kowalevskii] Length = 310 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 21/182 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IR L N+ +G ++ +H SL+ DD+ DN +RRG P H Sbjct: 36 GKEIRMKLTQGFNHWLNIPEEKLHVIGEVVQMLHNASLLIDDIE--DNSKLRRGIPVAHN 93 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 Y I N + A + + + + ++ +LSL GQ +DI Sbjct: 94 IYGIPHTINCANYVFFLALQKLLNLNNAQVTQVYTEQLLSLHE---------GQGMDIWW 144 Query: 168 QDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D ++ +E M+ K KTG L +M S+N K + ENLG+ FQ+ Sbjct: 145 RDAYVCPTEEEYKDMVIK-KTGGLFGLGIR---LMQIFSEN-KCDFKPLWENLGLYFQIR 199 Query: 225 DD 226 DD Sbjct: 200 DD 201 >gi|145609303|ref|XP_001409359.1| hypothetical protein MGG_13405 [Magnaporthe oryzae 70-15] gi|145016690|gb|EDK01120.1| hypothetical protein MGG_13405 [Magnaporthe oryzae 70-15] Length = 728 Score = 44.7 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 20/190 (10%) Query: 51 KKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 K +RS L+ +C +L+ V + + I+C+H SLI DD+ D +RRG P HI Sbjct: 434 KNMRSQLM-DCFNLWLEVPQPSLAAIKETIDCLHHSSLILDDIE--DGSDLRRGLPAAHI 490 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 Y AI + L A +++ R Q+M H+ L + GQ D+ Sbjct: 491 VYGVGQAINSATHLHVQA---VANMHAMASREGRPQMMDVFLHH--LNQLFIGQSWDLHW 545 Query: 170 EF-----IDETQVFMIQKMKTGALMCFACESGAIMAHAS-----QNEKERLRCFGENLGI 219 F +E + MI + KTGA++ E A A+ ++ K L F G Sbjct: 546 TFHRRCPTEEKYLNMIDQ-KTGAMLQMLLELMQTAAAAAKQGVLKDGKHLLWEFTRLFGR 604 Query: 220 IFQLADDLLD 229 FQ+ DD ++ Sbjct: 605 FFQVRDDYMN 614 >gi|26376318|dbj|BAB28153.2| unnamed protein product [Mus musculus] gi|220941794|emb|CAX15883.1| prenyl (solanesyl) diphosphate synthase subunit 1 [Mus musculus] Length = 280 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 9/85 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V A N++H A + A+ E IH +L+HDD+ +D+ RR Sbjct: 127 GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 184 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYA 127 GK TV+ + E A++AG+ +L+ A Sbjct: 185 GKHTVNKIWGEKKAVLAGDLILSAA 209 >gi|328860517|gb|EGG09623.1| hypothetical protein MELLADRAFT_47465 [Melampsora larici-populina 98AG31] Length = 366 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 10/186 (5%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + GK+IRS ++ V + + +H SL+ DD+ D+ +RRG P Sbjct: 74 IPGKEIRSMMIDAFNHWLQVPRPALEIIKKIVGQLHTASLLMDDV--EDDSDLRRGVPVT 131 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H Y I N + A++ ++ K L+ + + L SL ++ LQ + GQ +D+ Sbjct: 132 HKIYGIPQTINTANYVYFLAYQELTKLKPCLRSDATTDLW-SLVNDELLQ-LHRGQGMDL 189 Query: 168 --QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 +D T+ +Q + KTG L A + ++A + E +GIIFQ+ Sbjct: 190 YWRDSLTCPTEEEYLQMVNNKTGGLFRIAIK--LMIALSPIPETPDYLPLVNLVGIIFQI 247 Query: 224 ADDLLD 229 DDLL+ Sbjct: 248 RDDLLN 253 >gi|150865549|ref|XP_001384814.2| geranylgeranyl diphosphate synthase [Scheffersomyces stipitis CBS 6054] gi|149386805|gb|ABN66785.2| geranylgeranyl diphosphate synthase [Scheffersomyces stipitis CBS 6054] Length = 347 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 23/173 (13%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +G I H SL+ DD+ D+ RRG P H +Y I GN + A + Sbjct: 67 IGDIISIFHNASLLIDDIE--DSSEYRRGFPAAHTKYGIPLTINCGNLMYFVALQKAQIT 124 Query: 135 KTQLKDNIRSQLMLSL------THNIGLQGMLG---GQMLDI-QDEFIDETQ-------- 176 +L ++ S L + + T I + ML GQ LDI +++ ETQ Sbjct: 125 LPRLYSDLNSDLEIDIDKLKFETSQILIDEMLNLHHGQGLDIYWRDYLPETQESLPSVQD 184 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + K KTG L + + ++A S+ E L LGII+Q+ DD L+ Sbjct: 185 YLSMVKDKTGGLFRLSIK---LLALFSKRETTDLIPIANLLGIIYQVRDDYLN 234 >gi|125977318|ref|XP_001352692.1| GA21189 [Drosophila pseudoobscura pseudoobscura] gi|195174424|ref|XP_002027974.1| GL21354 [Drosophila persimilis] gi|54641441|gb|EAL30191.1| GA21189 [Drosophila pseudoobscura pseudoobscura] gi|194115684|gb|EDW37727.1| GL21354 [Drosophila persimilis] Length = 339 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++LLQ +++Q + GK+ RS L + ++G ++ Sbjct: 21 DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPAEKLAQIGDIVQ 66 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H SL+ DD+ DN +RRG P H Y + I A N L A E + Sbjct: 67 MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQLLGHPEAT 124 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L L G++ + +D F E+ ++ KTG L A + Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226 M S N KE LG+ FQ+ DD Sbjct: 175 MQLFSAN-KEDYSKLTAILGLYFQIRDD 201 >gi|119167460|gb|AAY33488.2| putative mitochondrial isoprenyl diphosphate synthase precursor [Aphis fabae] Length = 394 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 29/216 (13%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNV-------NHLTALRVGAAIECIHCYSLIHDD 91 L ++Y + GGKK R + + + N + +G +E + Y L+ DD Sbjct: 85 LAKVLQYNVPGGKKNRGLALVPSFKMLSSPSDQTDENLRLSYILGWCVEILQAYQLVLDD 144 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149 + MDN RRG+P + +++++ + +G+L +++I K KD +L Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGILLEQTIYQLI---KKYFKDKPYYVHILE 198 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVF---------MIQKMKTGALMCFACESGAIMA 200 L +++ ++ +G Q LD+ +T+ I K KT A F M Sbjct: 199 LFYDVTMKTSMG-QCLDMLTANSFKTKKLEKYTMENYTAIVKYKT-AYYSFFLPVCLAMR 256 Query: 201 HASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233 + N+ E R +G FQ+ DD LDC D Sbjct: 257 MTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292 >gi|330469324|ref|YP_004407067.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] gi|328812295|gb|AEB46467.1| polyprenyl synthetase [Verrucosispora maris AB-18-032] Length = 342 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 56/241 (23%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVG 76 T LDD L+ A ++ + L GGK++R +F V+ + Sbjct: 17 TDLDDALVPVAEAIEA-----------FVLGGGKRLRPAFAYWGYRGAGGVDTDAVVTAL 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAG 120 AA+E + +LIHDDL MD RRG+P VH + + + AI+ G Sbjct: 66 AALEFVQASALIHDDL--MDRSDTRRGEPAVHRRFAARHRAAGWGGNPDGFGDAAAILLG 123 Query: 121 NGLLTYAFEIISS----PKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171 + L ++ E++ S P+T + D +R+++ + GQ LD+ + Sbjct: 124 DLCLVWSDELLHSAGLDPRTVARARPDFDEMRTEVTV-------------GQYLDVVTQA 170 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR----CFGENLGIIFQLADDL 227 + + K+ + E ++ A + +R +G LG FQL DD+ Sbjct: 171 TGDASLERASKIARYKSAKYTVERPLLLGAALADAPADIRVAYSAYGLPLGEAFQLRDDV 230 Query: 228 L 228 L Sbjct: 231 L 231 >gi|414611|emb|CAA53433.1| dimethylallyltransferase [Arabidopsis thaliana] Length = 343 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 89/214 (41%), Gaps = 26/214 (12%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRV------GAAIECIHCYSLIH 89 DR+L Y + GGK R V + L N LT V G IE + Y L+ Sbjct: 37 DRMLD---YNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVL 93 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ MDN RRG+P + +V + +G+L I K +D ++ Sbjct: 94 DDI--MDNSVTRRGQPC-WFRVPQVGMVAINDGILLRN-HIHRILKKHFRDKPYYVDLVD 149 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCFACESGAIMAH 201 L + + LQ G QM+D+ F E + I + KT A F + Sbjct: 150 LFNEVELQTACG-QMIDLITTFEGEKDLSKYSLSIHRRIVQHKT-AYYSFYLPVACALLM 207 Query: 202 ASQNEKERL--RCFGENLGIIFQLADDLLDCEED 233 A +N + + + ++GI FQ+ DD LDC D Sbjct: 208 AGENLENHIDVKNVLVDMGIYFQVQDDYLDCFAD 241 >gi|71005854|ref|XP_757593.1| hypothetical protein UM01446.1 [Ustilago maydis 521] gi|46097004|gb|EAK82237.1| hypothetical protein UM01446.1 [Ustilago maydis 521] Length = 399 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 104/255 (40%), Gaps = 45/255 (17%) Query: 11 ENSKRIDTILDDLLLQ-----TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 + KR +++ L+ + T+ M + D + Y GGK R V + + Sbjct: 93 QKRKRFESVFPLLVEELTAYLTSEKMPAEAIDWFRRNLDYNTPGGKLNRGLSVVDTVEIL 152 Query: 66 ---------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110 +L A +G IE + Y L+ DD+ MD RRG+P + Sbjct: 153 LCTDSDTGKISRELTEPEYLKAAILGWCIELLQAYFLVADDM--MDASVTRRGQPCWY-- 208 Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLD 166 V + GN + AF + ++ LK + RS ++L L H++ Q LG Q++D Sbjct: 209 --RVEGV--GNIAINDAFMLEAAIYFLLKKHFRSDPYYGMLLELFHDVTFQTELG-QLID 263 Query: 167 I---QDEFIDETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGE--- 215 + ++ +D ++ F +QK + A F M A ++ + + Sbjct: 264 LITAPEDSVDLSK-FSLQKHHLIVVYKTAFYSFYLPVALAMRMAGVTDETLYKQALDILL 322 Query: 216 NLGIIFQLADDLLDC 230 +G FQ+ DD LDC Sbjct: 323 PMGEYFQVQDDFLDC 337 >gi|209870011|ref|NP_001119633.3| mitochondrial isoprenyl diphosphate synthase [Acyrthosiphon pisum] Length = 394 Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 27/215 (12%) Query: 39 LLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 L ++Y + GGKK R +++ A + N + +G +E + Y L+ DD Sbjct: 85 LAKLLQYNVPGGKKNRGLALVLSYKMLSSPADQTDENIRLSYILGWCVEILQAYQLVLDD 144 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + MDN RRG+P + +++++ + +G+L I K KD +L L Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGVLLEQ-SIYQLIKKYFKDKPYYTHILELF 200 Query: 152 HNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +++ ++ +G Q LD+ +++ E ++ K KT A F M Sbjct: 201 YDVTMKTSMG-QCLDMLTANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAMRM 257 Query: 202 ASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233 + N+ E R +G FQ+ DD LDC D Sbjct: 258 TNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292 >gi|254672305|emb|CBA05414.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha275] Length = 171 Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 2/83 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 45 GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEII 131 + A++ G+ L T AF+++ Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLM 125 >gi|260945739|ref|XP_002617167.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238849021|gb|EEQ38485.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 374 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 64/243 (26%), Positives = 97/243 (39%), Gaps = 52/243 (21%) Query: 24 LLQTASHMQTQHN------DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--- 74 L+Q + Q+N D + Y GGK R V + + L L Sbjct: 41 LVQELKEILVQYNMPQEAIDWFTKNLNYNTPGGKLNRGLSVIDTYCILKNKSLADLSQEE 100 Query: 75 ------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 +G AIE + Y L+ DD+ MD RRG+P ++ V + GN + +F Sbjct: 101 YKKVAILGWAIELLQAYFLVADDM--MDQSKTRRGQPCWYL----VEGV--GNIAINDSF 152 Query: 129 EIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQ 181 + + LK + R +L L H + Q LG Q+LD+ +E +D + F + Sbjct: 153 MLEGAIYVLLKKHFRQDPYYVDLLDLFHEVTFQTELG-QLLDLVTADEEHVDLDK-FSLA 210 Query: 182 K------MKTG--------ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 K KT AL F C S+ + +++R LG FQ+ DD Sbjct: 211 KHSFIVIFKTAYYSFYLPVALAMFMC------GINSEQDLKQVRDILIPLGEYFQIQDDY 264 Query: 228 LDC 230 LDC Sbjct: 265 LDC 267 >gi|302812450|ref|XP_002987912.1| hypothetical protein SELMODRAFT_127038 [Selaginella moellendorffii] gi|300144301|gb|EFJ10986.1| hypothetical protein SELMODRAFT_127038 [Selaginella moellendorffii] Length = 374 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 33/238 (13%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNV-NHLT-- 71 D I +LL + T+ + +S + Y + GGK R V + L + L+ Sbjct: 42 FDKIKKELLADCDAFQFTRESREWVSKMLDYNVPGGKLNRGLSVIDSLVLLKSEDELSRD 101 Query: 72 ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A +G IE + Y L+ DD+ MD+ + RRGKP+ Q + ++A N L Sbjct: 102 EIEQAFALGWCIEWLQAYFLVMDDI--MDDSHTRRGKPSWFKQPN--VGLVAANDALLLR 157 Query: 128 FEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDI---------QDEFIDE 174 + P+ L+ QL + L + Q G QMLD+ +++ E Sbjct: 158 NHV---PRI-LRKYFHGQLYYFDLRELFDEVEYQTACG-QMLDLITSPAGKVDLSKYVME 212 Query: 175 TQVFMIQKMKTGALMCFACESGAI-MAHASQNEK-ERLRCFGENLGIIFQLADDLLDC 230 T + ++ K KT + + A+ M+ S N K E + +G FQ+ DD LDC Sbjct: 213 TYLRIV-KFKTAFYSFYLPVACALYMSGESDNSKFESAKQILLQMGTYFQIQDDFLDC 269 >gi|282935089|gb|ACT79809.3| mitochondrial farnesyl diphosphate synthase [Aphis gossypii] Length = 394 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 31/217 (14%) Query: 39 LLSAIRYALLGGKKIR------SF-LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 L ++Y + GGKK R SF +++ + + N + +G +E + Y L+ DD Sbjct: 85 LAKVLQYNVPGGKKNRGLALVLSFKMLSSPSDQTDENLRLSYILGWCVEILQAYQLVLDD 144 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149 + MDN RRG+P + +++++ + +G+L +++I K KD +L Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGILLEQTIYQLI---KKYFKDKPYYVHILE 198 Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199 L +++ ++ +G Q LD+ +++ E ++ K KT A F M Sbjct: 199 LFYDVTMKTSMG-QCLDMLTANSFKTKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAM 255 Query: 200 AHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233 + N+ E R +G FQ+ DD LDC D Sbjct: 256 RMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292 >gi|304406152|ref|ZP_07387809.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] gi|304344736|gb|EFM10573.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] Length = 304 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 14/153 (9%) Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-QYDEVTAIIAGNGLLTYAFEIISSP 134 AA+E + I+DDL DN P V Q D A+ GL + + ++I + Sbjct: 65 AAAVELMILALDIYDDLQDKDN-------PKVPWSQIDPAIALNVAIGLQSLSMDLILTV 117 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 +R+ L N G+ + GQ D+++E + E + + + K+G+L+ AC Sbjct: 118 PGPSDRKLRAATYL----NQGVLRAVNGQHTDLRNEPMTEEECLQMIEEKSGSLVAAACL 173 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 GA A A+ E + +G +GI QL +D+ Sbjct: 174 VGA--ALATDEHAELIGAYGRAIGIAAQLRNDV 204 >gi|7648574|gb|AAF65590.1|AF139916_11 GGPP synthase [Brevibacterium linens] Length = 385 Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust. Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 29/214 (13%) Query: 38 RLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L ++ + GGK IR ++ + A+L + A+ A++ +H +IHDD+ +D Sbjct: 70 QLWDSLTHMATGGKLIRPRMLLDAHAALGGRDEHAAVDAACAMQLLHIALVIHDDV--ID 127 Query: 97 NGYIRRGKPTVHIQYDE-----------------VTAIIAGNGLLTYAFEIISSPKTQLK 139 N IRRG+ T+ ++ T+I+ G+ +LT + +++ + ++ Sbjct: 128 NDTIRRGEATISGEFASEAMSRGALRRDANAWGIATSILGGDLILTLSHSLLA--RLDIE 185 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDETQVFMIQKMKTGALMCFACE-- 194 D R + +L + + ++ G L + E + V + KT A+ F Sbjct: 186 DTKR-RAILDIFDDTVVESAAGEHSDVWLSLHLEGANSPDVLAMVDQKT-AVYSFQAPLL 243 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A++A A + L +G+I+QL DD+L Sbjct: 244 IAAVLAGADSGLIDDLANISRQIGVIYQLRDDVL 277 >gi|50355631|dbj|BAD29970.1| geranylgeranyldiphosphate synthase [Phoma betae] Length = 343 Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 19/181 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R+ L+ V + +G + +H SL+ DD+ DN +RRGKP Sbjct: 68 GKEVRTLLLACFDEWLQVPPESLEVIGQVVRMLHTASLLIDDI--QDNSELRRGKPVAQN 125 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + I + N + A E ++S K +I ++ +L L GQ +D+ Sbjct: 126 IFGTALTINSANYVYFLALEKLNSLKNPNITDIFTEELLRLHR---------GQAMDLYW 176 Query: 168 QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D E + F + TG L M +A + L E LG+IFQ+ D Sbjct: 177 RDTLTCPTEEEYFEMVANMTGGLFWLMYR----MMNAESSMPIDLLPVVELLGVIFQVLD 232 Query: 226 D 226 D Sbjct: 233 D 233 >gi|323356561|ref|YP_004222957.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum StLB037] gi|323272932|dbj|BAJ73077.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum StLB037] Length = 363 Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 49/260 (18%) Query: 6 PSKLQENSKRIDTILDDLLLQTAS-HMQTQHNDRLLSAIRYALLGGKKIRS-FLVTECAS 63 P ++ S+R+D L D L +S + + R +A +L GGK++R+ F +T + Sbjct: 5 PEPIEAVSQRLDKFLSDQLSYASSLGPEAETMSRAGAA---SLRGGKRLRARFCLTGWRA 61 Query: 64 LFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ------ 110 + + AA +E +L+HDD+ +DN RRG+P H Sbjct: 62 VAESTAARTVAPAAAAISVAAALEIFQAAALVHDDI--IDNSDTRRGQPAAHRALEAAHA 119 Query: 111 ----------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL---Q 157 + A++ G+ L+ ++ ++ L+D + Q S T + + Sbjct: 120 AAHWAGDAAMFGRSGAVLLGDLLVAWSDDL-------LEDALADQPTASATRRLYAHMRR 172 Query: 158 GMLGGQMLDIQDE-----FIDETQVFMIQKMKTGALMCFAC----ESGAIMAHASQNEKE 208 + GQ LD+ +E + D+ ++ + ++ E GA +A A ++ + Sbjct: 173 DVTIGQFLDVAEESAYAVYPDDQHAERALRVASYKSARYSIQKPLEIGAALAGADDDQLD 232 Query: 209 RLRCFGENLGIIFQLADDLL 228 L FG ++G+ FQL DD+L Sbjct: 233 ALARFGHDVGMAFQLRDDVL 252 >gi|75233327|sp|Q7XYT0|FPPS2_ARTSI RecName: Full=Farnesyl diphosphate synthase 2; Includes: RecName: Full=Dimethylallyltranstransferase; Includes: RecName: Full=(2E,6E)-farnesyl diphosphate synthase gi|32329197|gb|AAP74719.1| farnesyl diphosphate synthase [Artemisia spiciformis] Length = 342 Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 90/241 (37%), Gaps = 44/241 (18%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71 D++ DL+ A + + + Y + GGK R V + L LT Sbjct: 14 DSLKSDLIHDPAFEFDDDSRNWVERMLDYNVPGGKLNRGLSVVDSYKLLKQEELTEDEVF 73 Query: 72 -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A +G IE + Y L+ DD+ MD + RRG+P + +V I +G++ I Sbjct: 74 LACALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLPKVGMIAVNDGVVLRN-HI 129 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQK 182 K + +L L + + Q GQM+D+ + ++ I K Sbjct: 130 PRILKKHFRGKAYYADLLDLFNEVEFQTA-SGQMIDLITTLFGQKELSKYSLSTHQRIVK 188 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENL-------------GIIFQLADDLLD 229 KT + + A++ FGENL G FQ+ DD LD Sbjct: 189 FKTAYYSFYLPVACALLM------------FGENLDDHVQVKDVLVEMGTYFQVQDDYLD 236 Query: 230 C 230 C Sbjct: 237 C 237 >gi|25452946|sp|O24242|FPPS2_PARAR RecName: Full=Farnesyl pyrophosphate synthase 2; Short=FPP synthase 2; Short=FPS 2; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2; AltName: Full=Dimethylallyltranstransferase 2; AltName: Full=Farnesyl diphosphate synthase 2; AltName: Full=Geranyltranstransferase 2 gi|1532052|emb|CAA57893.1| farnesyl diphosphate synthase [Parthenium argentatum] Length = 342 Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust. Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 28/233 (12%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71 DT+ +L+ A + + Y + GGK R V + L LT Sbjct: 14 DTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVIDSYQLLKGGKLTDDEIF 73 Query: 72 -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A +G +E + Y L+ DD+ MD + RRG+P + +V I A +G++ Sbjct: 74 HASALGWCVEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLPKVGMIAANDGIILRN--- 127 Query: 131 ISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM------- 179 P+ LK + R + ++ L + + Q GQM+D+ + E + Sbjct: 128 -HVPRI-LKKHFRGKPYYVDLVDLFNEVEFQ-TASGQMIDLITTLVGEKDLSKYSLSIHR 184 Query: 180 -IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230 I + KT + + A++ EK ++ +G FQ+ DD LDC Sbjct: 185 RIVQYKTAYYSFYLPVACALLMFGEDLEKHVEVKNVLVEMGTYFQVQDDYLDC 237 >gi|75233326|sp|Q7XYS9|FPPS1_ARTSI RecName: Full=Farnesyl diphosphate synthase 1; Includes: RecName: Full=Dimethylallyltranstransferase; Includes: RecName: Full=(2E,6E)-farnesyl diphosphate synthase gi|32329199|gb|AAP74720.1| farnesyl diphosphate synthase [Artemisia spiciformis] Length = 346 Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust. Identities = 56/236 (23%), Positives = 95/236 (40%), Gaps = 28/236 (11%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71 K DT+ DL+ A + + Y + GGK R V + L L+ Sbjct: 15 KVYDTLKSDLINDPAFEFDDDSRQWIQKMLDYNVPGGKLNRGLSVVDSYQLLKGGELSDD 74 Query: 72 ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + +G IE + Y L+ DD+ MD + RRG+P + +V I A +G+L Sbjct: 75 EIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLPKVGMIAANDGILLRN 131 Query: 128 FEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---- 179 P+ LK + R + ++ L + + Q GQM+D+ + E + Sbjct: 132 ----HVPRI-LKKHFRGKPYYVDLVDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLS 185 Query: 180 ----IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230 I + KT + + A++ +K ++ +G FQ+ DD LDC Sbjct: 186 IHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDC 241 >gi|325111161|ref|YP_004272229.1| hypothetical protein Plabr_4636 [Planctomyces brasiliensis DSM 5305] gi|324971429|gb|ADY62207.1| protein of unknown function DUF116 [Planctomyces brasiliensis DSM 5305] Length = 623 Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 22/204 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLT--------------ALRVGA-AIECIHCYSLIHDDLP 93 GGK+ R F+ N T A++ A AIE H SL+HDD+ Sbjct: 297 GGKRFRPFITLAAWDARNGGDATRKDPSSNEPLEVPDAVKKAAIAIEAFHKASLVHDDI- 355 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM--LSLT 151 D+ R G+ T+H Q+ AI G+ L+ + +++ S ++ +SL Sbjct: 356 -QDDDEYRYGEETLHRQHGVGIAINVGDYLIGMGYRLLAECHVADDPMAVSDIVQRMSLA 414 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQV--FMIQKMKTGALMCFACESGAIMAHASQNEKER 209 H I L G +M + ++ T + I +KT A SG + E Sbjct: 415 H-IKLCEGQGAEMEWTANPSLNLTPLDAMQIYALKTSPAFEAALYSGLRLGGDVSEYDEM 473 Query: 210 LRCFGENLGIIFQLADDLLDCEED 233 + F +LG+ FQ+ +DL D D Sbjct: 474 VSTFCRHLGVGFQILNDLKDWRGD 497 >gi|257877744|ref|ZP_05657397.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC20] gi|257811910|gb|EEV40730.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC20] Length = 177 Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 3/92 (3%) Query: 49 GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK +R ++ + A + + A+ + A+IE +H SLIHDD+ +D+ RR PT+ Sbjct: 46 GGKLLRPAYQLLFSAYGSDKDREKAVALAASIEMLHTASLIHDDI--VDHADTRRKLPTI 103 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 ++ A+ AG+ L F++++ + +K Sbjct: 104 RSEFGNDVAVYAGDYLFVCCFKLMADYASSMK 135 >gi|254729448|gb|ACT79808.1| mitochondrial farnesyl diphosphate synthase [Aphis gossypii] Length = 394 Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 29/216 (13%) Query: 39 LLSAIRYALLGGKKIR------SF-LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 L ++Y + GGKK R SF +++ + + N + +G +E + Y L+ DD Sbjct: 85 LAKVLQYNVPGGKKNRGLALVLSFKMLSSPSDQTDENLRLSYILGWCVEILQAYQLVLDD 144 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149 + MDN RRG+P + +++++ + +G+L +++I K KD +L Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGILLEQTIYQLI---KKYFKDKPYYVHILE 198 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVF---------MIQKMKTGALMCFACESGAIMA 200 L +++ ++ +G Q LD+ +T+ I K KT A F M Sbjct: 199 LFYDVTMKTSMG-QCLDMLTANSFKTKKLEKYTMENYTAIVKYKT-AYYSFFLPVCLAMR 256 Query: 201 HASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233 + N+ E R +G FQ+ DD LDC D Sbjct: 257 MTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292 >gi|15608129|ref|NP_215504.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv] gi|148660770|ref|YP_001282293.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis H37Ra] gi|2052123|emb|CAB08149.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis H37Rv] gi|148504922|gb|ABQ72731.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis H37Ra] Length = 325 Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 49 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216 Query: 225 DDLLDCEED 233 D++ D Sbjct: 217 RDIIAISGD 225 >gi|311742815|ref|ZP_07716623.1| polyprenyl synthetase [Aeromicrobium marinum DSM 15272] gi|311313495|gb|EFQ83404.1| polyprenyl synthetase [Aeromicrobium marinum DSM 15272] Length = 362 Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 47/218 (21%) Query: 49 GGKKIRSFLVTECASLFNVNHLT--------ALRVGA-AIECIHCYSLIHDDLPSMDNGY 99 GGK++R C + + V T A+ V A ++E + +L+HDDL MD Sbjct: 49 GGKRLRPAF---CLAGWRVATATPDDTPVPEAVAVAAGSLEWLQGSALVHDDL--MDGSD 103 Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISS------PKTQ 137 RRG+P+VH +++ TA++ G+ +L++ E++ S P T Sbjct: 104 TRRGRPSVHRDFEQRHRREAMVGDPAGFGAATAVLMGDLMLSWCDEMLRSAGHRPGPFTG 163 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACE 194 R + ++ ++ GQ LD+ ++ E+ + ++ + K + E Sbjct: 164 ADGAARLARAFEVL-DVCKTEVVAGQFLDVVNQTRPESSAAEAMLVVRYKAAK---YTVE 219 Query: 195 S----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA + Q L LG FQL DD+L Sbjct: 220 RPLHLGATLGGGDQALMAGLSAVALPLGEAFQLRDDVL 257 >gi|308231691|ref|ZP_07413460.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu001] gi|308378784|ref|ZP_07483890.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu010] gi|308379930|ref|ZP_07488129.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu011] gi|308397859|ref|ZP_07492630.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu012] gi|308216330|gb|EFO75729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu001] gi|308359223|gb|EFP48074.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu010] gi|308363135|gb|EFP51986.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu011] gi|308366792|gb|EFP55643.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu012] Length = 333 Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 57 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 114 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 115 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 164 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 165 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 224 Query: 225 DDLLDCEED 233 D++ D Sbjct: 225 RDIIAISGD 233 >gi|254231286|ref|ZP_04924613.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis C] gi|124600345|gb|EAY59355.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis C] Length = 333 Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 57 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 114 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 115 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 164 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 165 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 224 Query: 225 DDLLDCEED 233 D++ D Sbjct: 225 RDIIAISGD 233 >gi|31792180|ref|NP_854673.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97] gi|121636916|ref|YP_977139.1| putative polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822198|ref|YP_001286952.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis F11] gi|215429849|ref|ZP_03427768.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis EAS054] gi|215445137|ref|ZP_03431889.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T85] gi|218752659|ref|ZP_03531455.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis GM 1503] gi|224989388|ref|YP_002644075.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|253799983|ref|YP_003032984.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN 1435] gi|254363907|ref|ZP_04979953.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis str. Haarlem] gi|254549973|ref|ZP_05140420.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260200016|ref|ZP_05767507.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T46] gi|289442409|ref|ZP_06432153.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T46] gi|289555229|ref|ZP_06444439.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN 605] gi|289749517|ref|ZP_06508895.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T92] gi|289753047|ref|ZP_06512425.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis EAS054] gi|289757072|ref|ZP_06516450.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T85] gi|289761123|ref|ZP_06520501.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis GM 1503] gi|297633514|ref|ZP_06951294.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN 4207] gi|297730499|ref|ZP_06959617.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN R506] gi|313657828|ref|ZP_07814708.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN V2475] gi|31617768|emb|CAD93877.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL PYROPHOSPHATE SYNTHETASE) [Mycobacterium bovis AF2122/97] gi|121492563|emb|CAL71031.1| Probable polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134149421|gb|EBA41466.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis str. Haarlem] gi|148720725|gb|ABR05350.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis F11] gi|224772501|dbj|BAH25307.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321486|gb|ACT26089.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN 1435] gi|289415328|gb|EFD12568.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T46] gi|289439861|gb|EFD22354.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN 605] gi|289690104|gb|EFD57533.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T92] gi|289693634|gb|EFD61063.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis EAS054] gi|289708629|gb|EFD72645.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis GM 1503] gi|289712636|gb|EFD76648.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis T85] gi|326904785|gb|EGE51718.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis W-148] gi|328459725|gb|AEB05148.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis KZN 4207] Length = 325 Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 49 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216 Query: 225 DDLLDCEED 233 D++ D Sbjct: 217 RDIIAISGD 225 >gi|308370103|ref|ZP_07420299.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu002] gi|308370565|ref|ZP_07422005.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu003] gi|308371822|ref|ZP_07426360.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu004] gi|308372989|ref|ZP_07430673.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu005] gi|308374160|ref|ZP_07435075.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu006] gi|308375313|ref|ZP_07443508.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu007] gi|308376574|ref|ZP_07439328.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu008] gi|308377573|ref|ZP_07479700.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu009] gi|308325351|gb|EFP14202.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu002] gi|308331528|gb|EFP20379.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu003] gi|308335332|gb|EFP24183.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu004] gi|308339139|gb|EFP27990.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu005] gi|308342810|gb|EFP31661.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu006] gi|308346663|gb|EFP35514.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu007] gi|308350578|gb|EFP39429.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu008] gi|308355269|gb|EFP44120.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis SUMu009] Length = 333 Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 57 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 114 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 115 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 164 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 165 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 224 Query: 225 DDLLDCEED 233 D++ D Sbjct: 225 RDIIAISGD 233 >gi|254672306|emb|CBA05417.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha275] Length = 186 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 37/67 (55%) Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q+++I + I E Q + + KT L A + GAI+ AS + L+ +G +G FQ Sbjct: 13 QLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQ 72 Query: 223 LADDLLD 229 + DD+LD Sbjct: 73 IIDDVLD 79 >gi|215402805|ref|ZP_03414986.1| polyprenyl synthetase [Mycobacterium tuberculosis 02_1987] Length = 331 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 55 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 112 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 113 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 162 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 163 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 222 Query: 225 DDLLDCEED 233 D++ D Sbjct: 223 RDIIAISGD 231 >gi|25027199|ref|NP_737253.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens YS-314] gi|259506664|ref|ZP_05749566.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens YS-314] gi|23492480|dbj|BAC17453.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens YS-314] gi|259165748|gb|EEW50302.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens YS-314] Length = 374 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 35/214 (16%) Query: 46 ALLGGKKIRSFLV-------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD-- 96 AL GGK +R ++ T A+ N AL++ A E +H L+HDD+ D Sbjct: 55 ALRGGKLVRPRMLLGTHRTMTADATAGTANREAALQIAVATELLHFAFLVHDDVIDGDLY 114 Query: 97 -----------------NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 + + RG H+ + I+ GN L ++ + + L Sbjct: 115 RRGKLNFIGQILKQRDPDNFSDRGPDPEHLHWACSNGILIGNLFLAATHQVFA--RVDLP 172 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMC-FACE 194 R +L+ L H + L G+ LD+ + D + + ++KT Sbjct: 173 HPTRLRLLDLLDHT--MNDSLVGEFLDVGLSSRAITPDISTALEMSRLKTATYTFELPLR 230 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + AI+A S+ +++++ G +LG +QL DD L Sbjct: 231 AAAILAGLSEEDEQKVGVIGTHLGTAYQLQDDYL 264 >gi|215426267|ref|ZP_03424186.1| polyprenyl synthetase [Mycobacterium tuberculosis T92] Length = 331 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 55 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 112 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 113 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 162 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 163 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 222 Query: 225 DDLLDCEED 233 D++ D Sbjct: 223 RDIIAISGD 231 >gi|196013707|ref|XP_002116714.1| hypothetical protein TRIADDRAFT_31406 [Trichoplax adhaerens] gi|190580692|gb|EDV20773.1| hypothetical protein TRIADDRAFT_31406 [Trichoplax adhaerens] Length = 352 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 41/249 (16%) Query: 18 TILDDLLLQTASHMQTQ--HNDRLLSAIRYA-------LLGGKKIRSFLVTECASLF--- 65 T+ D L Q + + ND+ + AI++ + GGK+ R V A L Sbjct: 15 TLFDQLFPQLVTELTEDGLANDQTVDAIQWMKKSLECNVPGGKRNRGLSVIATARLLVAP 74 Query: 66 ----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + AL +G +E + + L+ DD+ MD+ RRG+P + E+ I + Sbjct: 75 QELSDEDIKGALILGWCVEFLQAFFLVADDI--MDDSVTRRGQP-CWFRNPEIGTIAIND 131 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175 +F I S LK RSQ +L L H +G Q LD+ ++D + Sbjct: 132 -----SFMIESCIYKLLKKYFRSQPYYADLLDLMHETTYDTEVG-QTLDLITAPSYVDFS 185 Query: 176 QVFMIQKMKT-----GALMCFACESGAIMAHASQNEK---ERLRCFGENLGIIFQLADDL 227 + F I++ + A+ F M N + + R +G FQ+ DD Sbjct: 186 R-FSIERYRAIVKYKTAIYSFYLPVALAMTMTKNNSEVDYQDARQVLMQMGEYFQIQDDF 244 Query: 228 LDCEEDLPK 236 LDC D PK Sbjct: 245 LDCFGD-PK 252 >gi|289744725|ref|ZP_06504103.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis 02_1987] gi|289685253|gb|EFD52741.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis 02_1987] Length = 325 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 49 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216 Query: 225 DDLLDCEED 233 D++ D Sbjct: 217 RDIIAISGD 225 >gi|149247108|ref|XP_001527979.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146447933|gb|EDK42321.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 504 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 30/47 (63%) Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KT +LM +C + A+++ A + E FG NLG+ FQ+ DD+LD Sbjct: 354 LKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLD 400 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 R+ +E IH SL+HDD+ +D RRG+P+ ++ + A++AG+ LL A Sbjct: 186 RLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNVAFTNKMAVLAGDFLLGRA 237 >gi|167968055|ref|ZP_02550332.1| polyprenyl synthetase [Mycobacterium tuberculosis H37Ra] Length = 331 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 55 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 112 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 113 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 162 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 163 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 222 Query: 225 DDLLDCEED 233 D++ D Sbjct: 223 RDIIAISGD 231 >gi|110776978|ref|XP_001122899.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like, partial [Apis mellifera] Length = 310 Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 87/218 (39%), Gaps = 36/218 (16%) Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + ++ LL Y L + GK+IR+ L + +G I+ +H SL+ DD+ Sbjct: 16 EEDEILLEPYNYILQVPGKQIRATLAHAFNYWLKIKSDKLRDIGDIIQLLHNASLLIDDI 75 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 DN +RRG P H Y + + A N + A E + L+L H Sbjct: 76 --QDNSVLRRGIPVAHNIYGVASTMNAANYAIFIALEKV----------------LALNH 117 Query: 153 NIGLQGML-------GGQMLDI--QDEFIDETQVFMIQK--MKTGALMCFACESGAIMAH 201 G+Q L GQ ++I +D +I T+ Q KTG L A + + Sbjct: 118 VEGIQIYLEQLLELHRGQGMEIYWRDNYICPTEAAYKQMTIQKTGGLFNLAVRLMQLFSE 177 Query: 202 ASQNEKERLRCFGENLGIIFQLADDL--LDCEEDLPKK 237 KE LG+ FQ+ DD L EE + K Sbjct: 178 C----KEDFVPLTSILGLYFQIRDDYCNLSSEEYVDNK 211 >gi|302781879|ref|XP_002972713.1| hypothetical protein SELMODRAFT_173042 [Selaginella moellendorffii] gi|300159314|gb|EFJ25934.1| hypothetical protein SELMODRAFT_173042 [Selaginella moellendorffii] Length = 363 Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 99/249 (39%), Gaps = 32/249 (12%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTEC 61 G +K + R+ +L+ + S T + +S + Y + GGK R V + Sbjct: 21 GSFKAKFMDAYHRLKK---ELITDSESFSHTFESREWVSKMLDYNVPGGKLNRGLSVVDS 77 Query: 62 ASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 L A +G IE + Y L+ DD+ MD+ + RRG+P Q +V Sbjct: 78 LVLLRSGEELSEDELFLAFALGWCIEWLQAYFLVLDDI--MDDSHTRRGQPCWFRQ-PKV 134 Query: 115 TAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QD 169 I A +G+L + I++ D Q + L + Q G QMLD+ Sbjct: 135 GLIAANDGILLRNHISRILTR---HFHDKPYYQDLRELFDEVEYQTACG-QMLDLITTPP 190 Query: 170 EFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIF 221 +D ++ M I K KT A F + + +++K + +G F Sbjct: 191 GEVDLSKYVMDTYLRIVKYKT-AYYSFYLPVACALYMSGEDDKSKFESAERILVQMGTYF 249 Query: 222 QLADDLLDC 230 Q+ DD LDC Sbjct: 250 QIQDDYLDC 258 >gi|6899844|dbj|BAA90525.1| geranylgeranyl diphosphate synthase [Nigrospora sphaerica] Length = 392 Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 19/181 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IRS ++ + V + A+ +H SL+ DD+ DN +RRG+P H Sbjct: 117 GKEIRSLMLACFNAWLEVPAQRLEVIKRAVGMLHTASLLIDDI--QDNSELRRGRPVAHK 174 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + I + N + A + +++ +T +I + +L L GQ +D+ Sbjct: 175 IFGPAMTINSANHMYFLALQELNALETPGVVDIFTDELLRLHR---------GQAMDLYW 225 Query: 170 EFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E F + KTG L A + A L E LG++FQ+AD Sbjct: 226 RETLTCPTEADYFEMTSNKTGGLFRLAYR----LMKAESAVSVDLMPVVELLGVLFQVAD 281 Query: 226 D 226 D Sbjct: 282 D 282 >gi|227875512|ref|ZP_03993652.1| geranylgeranyl pyrophosphate synthase [Mobiluncus mulieris ATCC 35243] gi|306818821|ref|ZP_07452543.1| possible dimethylallyltransferase [Mobiluncus mulieris ATCC 35239] gi|227843848|gb|EEJ54017.1| geranylgeranyl pyrophosphate synthase [Mobiluncus mulieris ATCC 35243] gi|304648507|gb|EFM45810.1| possible dimethylallyltransferase [Mobiluncus mulieris ATCC 35239] Length = 360 Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 31/206 (15%) Query: 47 LLGGKKIRSF--LVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 LL GK+ R+ + AS V+ L +G +E +++HDD+ +D IR Sbjct: 47 LLRGKRFRAIGAYIGWIASGGTVSPQIPGCLLDLGTCLELFQASAIVHDDI--IDEARIR 104 Query: 102 RGKPTVHI-----------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 RG P+ I ++ E AI+ G+ L A +S L D+ R Q + L Sbjct: 105 RGLPSAQIAFMTSSPAGGPKFGESAAILWGDLLFAAANSYFASAVKGL-DSARLQALGQL 163 Query: 151 THNIGLQGMLG-GQMLDIQDEFID---------ETQVFMIQKMKTGALMCFACESGAIMA 200 + +Q + GQ LD+ E D E+ + +I+ + GA +A Sbjct: 164 Y--VTMQAEVAYGQYLDLFAESRDLTADVPPSKESAMEVIRHKTARYSVVIPILIGAALA 221 Query: 201 HASQNEKERLRCFGENLGIIFQLADD 226 A+ + +L F LGI +QL DD Sbjct: 222 GATPDLLAKLEDFSTPLGIAYQLRDD 247 >gi|119953112|ref|YP_945322.1| dimethylallyltransferase [Borrelia turicatae 91E135] gi|119861883|gb|AAX17651.1| dimethylallyltransferase [Borrelia turicatae 91E135] Length = 348 Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 28/198 (14%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK+IR L+ A N ++ +E H SLI DD+ D RRGKP Sbjct: 57 GGKRIRPMLMILLAYALGYNKKNTENLYKLSMLLELPHSGSLIIDDIE--DGAIKRRGKP 114 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQM 164 +H+ Y +I N + ++I + K + +SQ L++ L + GQ Sbjct: 115 AIHLIYGLDNSINTANLIYFLPAKLIQTSKLK-----KSQKLLIYENFFTTLSNLHLGQG 169 Query: 165 LDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +DI DE+I + ++KT L A I+ + K F Sbjct: 170 IDIALHNGTYIPNLDEYIS------LVELKTSCLFGMAGFLAGILTNNESKAKNLYNTFL 223 Query: 215 ENLGIIFQLADDLLDCEE 232 + LG FQ+ DD+ + ++ Sbjct: 224 K-LGTCFQIIDDIKNIKD 240 >gi|134100861|ref|YP_001106522.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291003525|ref|ZP_06561498.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133913484|emb|CAM03597.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 337 Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 88/185 (47%), Gaps = 15/185 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R LV A N A+ AA+E +H +SL+HDDL D RR +PT Sbjct: 52 GGKALRPALVLLSAQAVAPNGAQAVPAAAAVELVHNFSLLHDDLLDGDTS--RRHRPTAW 109 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++AG+ LL A E++ + D I S L ++ ++ GQ D+ Sbjct: 110 TVFGRPAALLAGDALLGLATEVLLDSTS--GDAIASARALC----AAVRSLIAGQNADLD 163 Query: 169 -----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 D +DE + KT AL+ + GA+ A + ERL FG LG+ FQL Sbjct: 164 FEHRADVTLDE--CLHMADEKTSALLACSTSIGALHVGAPRETVERLHAFGSELGMAFQL 221 Query: 224 ADDLL 228 DDLL Sbjct: 222 VDDLL 226 >gi|255943955|ref|XP_002562745.1| Pc20g01860 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587480|emb|CAP85515.1| Pc20g01860 [Penicillium chrysogenum Wisconsin 54-1255] Length = 372 Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%) Query: 33 TQHNDRLLSA-IRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 T+ ++++SA + Y L + GK IR L++ ++ V I+ +H SL+ D Sbjct: 71 TEPYEKIVSAPLEYLLCIPGKDIRGKLISAFNEWLHLPDDKLAIVKEVIDRLHTASLLID 130 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD----NIRSQL 146 D+ D +RRG P H + I A N YA+ + ++ D +I +Q Sbjct: 131 DI--QDASRLRRGHPVAHDVFGVAQTINAAN----YAYFLQQKRLNEINDPRAFHIFTQA 184 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 +L L +IG QGM L +D + E + + KTG L A E +M S Sbjct: 185 LLDL--HIG-QGM----DLYWRDALVCPTEAEYTRMVMYKTGGLFRLAVE---LMQIQST 234 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231 + R G LGIIFQ+ DD ++ + Sbjct: 235 TTTDLSRLVGL-LGIIFQIRDDYMNLQ 260 >gi|167519034|ref|XP_001743857.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777819|gb|EDQ91435.1| predicted protein [Monosiga brevicollis MX1] Length = 346 Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 89/226 (39%), Gaps = 53/226 (23%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALR------------VGAAIECIHCYSLIHD 90 + Y GGK R V L HL A R +G IE + + L+ D Sbjct: 42 LEYNCPGGKMNRGLSV-----LTTFRHLVAPREPTDQEIEQCNILGWCIEWLQAFFLVAD 96 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS------ 144 D+ MD RRG+P + Q E +A N +F I ++ LK + +S Sbjct: 97 DI--MDGSVTRRGQPCWYKQ--ENVGTVAIND----SFLIEAAIYKLLKKHFKSTPVYVD 148 Query: 145 --QLMLSLTHNIGLQGMLGGQMLD---------IQDEFIDETQVFMIQKMKTGALMCFAC 193 +LML T+ L GQ+LD + D F E ++ K KT A F Sbjct: 149 LLELMLETTYQTEL-----GQLLDLITAPEDQVVLDRFTIEKHTNIV-KYKT-AFYSFYL 201 Query: 194 ESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDCEEDLPK 236 M A +++ + +GI FQ+ DD LDC D PK Sbjct: 202 PVAMAMLLAGVKDEQAFANAKDILLEMGIFFQVQDDYLDCYGD-PK 246 >gi|62858985|ref|NP_001017122.1| geranylgeranyl diphosphate synthase 1 [Xenopus (Silurana) tropicalis] gi|89273784|emb|CAJ82104.1| ggps1 [Xenopus (Silurana) tropicalis] gi|111309089|gb|AAI21538.1| hypothetical protein LOC549876 [Xenopus (Silurana) tropicalis] Length = 296 Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK+IR+ L NV + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQIRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + ++ +Q +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPNAVHVFTQQLLELHR----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + E + ++Q KTG L A +M S +K+ L+ Sbjct: 125 ----GQGLDIYWRDTYTCPTEAEYKAMVLQ--KTGGLFGLAV---GLMQLFSSYDKD-LK 174 Query: 212 CFGENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 175 PLLNTLGLFFQIRDD 189 >gi|215410588|ref|ZP_03419396.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis 94_M4241A] gi|298524483|ref|ZP_07011892.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494277|gb|EFI29571.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 325 Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 49 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216 Query: 225 DDLLDCEED 233 D++ D Sbjct: 217 RDIIAISGD 225 >gi|254572275|ref|XP_002493247.1| Geranylgeranyl diphosphate synthase, increases the intracellular pool of geranylgeranyl diphosphate [Pichia pastoris GS115] gi|238033045|emb|CAY71068.1| Geranylgeranyl diphosphate synthase, increases the intracellular pool of geranylgeranyl diphosphate [Pichia pastoris GS115] gi|328352737|emb|CCA39135.1| hypothetical protein PP7435_Chr3-0163 [Pichia pastoris CBS 7435] Length = 336 Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 23/194 (11%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK R L+ V+H + + I+ +H SL+ DD+ D+ +RRG P H Sbjct: 31 GKHFRRILIDLFNEFLEVDHQSVESIEQVIDILHNSSLMVDDVE--DSATLRRGIPATHN 88 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG---GQMLD 166 + I N Y + + L ++ R +++ ++ M+ GQ LD Sbjct: 89 VFGIPQTINTAN----YMYFVAIQKAGTLGNHAR-------VNDVLIEEMMNLHRGQGLD 137 Query: 167 I--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS---QNEKERLRCFGENLGI 219 + +D F+ E Q + KTG L ++ + + + + L F LGI Sbjct: 138 LYWRDNFVCPSEEQYLDMVMNKTGGLFRLTVRLMELVQNPNDGVERKASSLVHFANLLGI 197 Query: 220 IFQLADDLLDCEED 233 ++Q+ DD L+ + D Sbjct: 198 VYQIRDDYLNLKSD 211 >gi|255075269|ref|XP_002501309.1| farnesyl-pyrophosphate synthetase [Micromonas sp. RCC299] gi|226516573|gb|ACO62567.1| farnesyl-pyrophosphate synthetase [Micromonas sp. RCC299] Length = 342 Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 82/219 (37%), Gaps = 33/219 (15%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHD 90 D + + Y + GK R V + N ++ A+ VG IE + L+ D Sbjct: 34 DWIDKMVEYNVPHGKLNRGLAVVDGMRALNPAGVSDDQMHRAMVVGWCIEWLQAAFLVWD 93 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ MD RRG+P + ++A N L +I S K K + +L + Sbjct: 94 DI--MDESVTRRGQPCWF--RNPKVEMVAINDGLVLECQIYSMLKKHCKAHAGYAELLEM 149 Query: 151 THNIGLQGMLGGQMLDIQDEFIDET-------QVFMIQKMKTGALMCFACESGAIM---- 199 H I + GQ+LD+ I E + +M A F + A M Sbjct: 150 FHEITYK-TASGQLLDLITAPIGEVDLSKYTEEAYMRIVTYKTAYYTFYLPAAAAMHLSG 208 Query: 200 -----AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A A NE E LG FQ+ DD LDC D Sbjct: 209 VTDPAAFAKANE------ICEKLGQFFQIQDDYLDCYGD 241 >gi|70887563|ref|NP_001020642.1| farnesyl pyrophosphate synthase [Danio rerio] gi|66911345|gb|AAH97112.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Danio rerio] gi|182891376|gb|AAI64398.1| Fdps protein [Danio rerio] Length = 356 Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 30/215 (13%) Query: 37 DRLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIH 89 +RL ++Y GGK+ R ++ L + + L AL VG IE + + L+ Sbjct: 46 NRLREVLQYNAPGGKRNRGLSVIGSLRELVSPSELPTEEVHRALLVGWCIELLQAFFLVA 105 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--- 146 DD+ MD+ RRG+P + + E + A N AF + S L+ + R Q Sbjct: 106 DDI--MDSSVTRRGQPCWYKK--EAIGLDAIND----AFLLEGSIYRLLRRHCRGQPYYV 157 Query: 147 -MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM-----IQKMKTGALMCFACESGA 197 +L L Q LG Q LD+ ID + M I K KT + + A Sbjct: 158 HLLELFTETSFQTELG-QALDLMTAPPHKIDLNRFTMERYKAIVKYKTAFYSFYLPVAAA 216 Query: 198 IMAHASQNEKER--LRCFGENLGIIFQLADDLLDC 230 + +NE E + +G FQ+ DD LDC Sbjct: 217 MYMAGIENEIEHHNAKTILLEMGEFFQIQDDYLDC 251 >gi|53733369|gb|AAH83515.1| Fdps protein [Danio rerio] Length = 359 Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 30/215 (13%) Query: 37 DRLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIH 89 +RL ++Y GGK+ R ++ L + + L AL VG IE + + L+ Sbjct: 49 NRLREVLQYNAPGGKRNRGLSVIGSLRELVSPSELPTEEVHRALLVGWCIELLQAFFLVA 108 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--- 146 DD+ MD+ RRG+P + + E + A N AF + S L+ + R Q Sbjct: 109 DDI--MDSSVTRRGQPCWYKK--EAIGLDAIND----AFLLEGSIYRLLRRHCRGQPYYV 160 Query: 147 -MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM-----IQKMKTGALMCFACESGA 197 +L L Q LG Q LD+ ID + M I K KT + + A Sbjct: 161 HLLELFTETSFQTELG-QALDLMTAPPHKIDLNRFTMERYKAIVKYKTAFYSFYLPVAAA 219 Query: 198 IMAHASQNEKER--LRCFGENLGIIFQLADDLLDC 230 + +NE E + +G FQ+ DD LDC Sbjct: 220 MYMAGIENEIEHHNAKTILLEMGEFFQIQDDYLDC 254 >gi|256074738|ref|XP_002573680.1| geranylgeranyl pyrophosphate synthase [Schistosoma mansoni] gi|238658865|emb|CAZ29912.1| geranylgeranyl pyrophosphate synthase, putative [Schistosoma mansoni] Length = 338 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 19/182 (10%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK IRS LV V + I+ +H SLI DD+ D ++RRGKPT H Sbjct: 29 NGKGIRSALVAAFNYWLKVPESILRVISDVIQMLHNASLIIDDIE--DGSHLRRGKPTAH 86 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167 + +I + N A E +S + I ++ ML L GQ +DI Sbjct: 87 CIFGVAPSINSANYAYFLALEKLSLLERPETVKIFTEQMLVLHR---------GQGMDIF 137 Query: 168 -QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + F E++ + KTG L +M S+N+ + + + +G+ +Q+ Sbjct: 138 WRSSFKCPSESEYEAMVLCKTGGLFSLGVR---LMQLFSENQTD-YKPLLDAIGLFYQIR 193 Query: 225 DD 226 DD Sbjct: 194 DD 195 >gi|300705868|ref|XP_002995273.1| hypothetical protein NCER_101910 [Nosema ceranae BRL01] gi|239604252|gb|EEQ81602.1| hypothetical protein NCER_101910 [Nosema ceranae BRL01] Length = 301 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 23/209 (11%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +++LS I Y +GGK R+ L S N L +L+ E + ++ DD+ MD Sbjct: 22 NKILSFITYNTVGGKGYRAELFNLIISDINSTEL-SLKTSCVYELLQSAFIVADDV--MD 78 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGL--LTYAFEIISSPKTQLK----DNIRSQLMLSL 150 IRRG V GL L YA +IS+ L+ +N RS L + Sbjct: 79 ESLIRRG----------VECYYRKKGLICLKYAQYLISALGKYLRMVRGENERSPLRATY 128 Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKE 208 +N L LG Q+LD + + +E V + ++ A+ F + + + E Sbjct: 129 -YNCILDTCLG-QILDSKKKSKEEYSVELYNRIIEYKTAIYTFYLPLVSGYLFSGRKEPS 186 Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPKK 237 L + + +G+IFQ+ DD L+ +L KK Sbjct: 187 CLYEYCKIIGMIFQMQDDYLNFFPELSKK 215 >gi|239917873|ref|YP_002957431.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] gi|239839080|gb|ACS30877.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] Length = 373 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 30/153 (19%) Query: 39 LLSAIRYALLGGKKIRSFLVT--ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L+ AI GGK++R+ L A+ GAA E +LIHDD+ +D Sbjct: 49 LVDAIADLTAGGKRLRAVLAWLGWRAAGGEAEDPRIAEAGAAFELFQAAALIHDDI--LD 106 Query: 97 NGYIRRGKPTVHIQYDEV----------------TAIIAGN---GLLTYAFEIISSPKTQ 137 RRG P+VH +++ + AI+AG+ G+ AF + + T Sbjct: 107 RSDTRRGMPSVHRRFESLHREAGWRHAAEHFGVSAAILAGDVALGMSETAFARVLA-GTP 165 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170 +D R++L G++ GQ LD+ E Sbjct: 166 REDRARAELARMRF------GVMAGQYLDVVAE 192 >gi|78191063|gb|ABB29856.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana sanderae] Length = 234 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 22/175 (12%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A +G IE + Y L+ DD+ MDN + RRG+P + + +V I +G+L + Sbjct: 2 ASALGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWY-KLPKVGMIAVNDGIL-----LR 53 Query: 132 SSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDE---------TQVF 178 + LK++ R++ +L L + + Q GQM+D+ + E T Sbjct: 54 NHITRILKNHFRAKPYYVDLLDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLPTHRR 112 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++Q +MA + ++ ++ +GI FQ+ DD LDC D Sbjct: 113 IVQYKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFAD 167 >gi|164661701|ref|XP_001731973.1| hypothetical protein MGL_1241 [Malassezia globosa CBS 7966] gi|159105874|gb|EDP44759.1| hypothetical protein MGL_1241 [Malassezia globosa CBS 7966] Length = 450 Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 60/213 (28%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 T R+ E IH SL+HDD+ +D +RRG P+ + +I+ G+ LL A Sbjct: 137 TQQRLAEITEMIHVASLLHDDV--IDASPLRRGAPSAPSTFGNKLSILGGDFLLGRASIA 194 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV------------- 177 ++ +L+D ++LM ++ N+ ++ + D + + + Q Sbjct: 195 LA----RLRDPEVTELMSTVIANLVEGEVMQLKATDSEQVPVTDVQSARPSNEVMERFWF 250 Query: 178 ----------------------FMIQK--MKTGALMCFACESGAIMA--------HASQN 205 F +QK +KT +L+ + S ++ + Sbjct: 251 AYDQGSSSAMSTPGAPNALLFEFYLQKTYLKTASLIAKSARSATVLGGCGTWSNQQSDMT 310 Query: 206 EKERLRC---------FGENLGIIFQLADDLLD 229 ++R FG N+GI FQL DD+LD Sbjct: 311 PQQRADAATVCDAAYTFGRNVGIAFQLVDDMLD 343 >gi|50302727|ref|XP_451300.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|1346032|sp|P49349|FPPS_KLULA RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|453166|emb|CAA53614.1| Farnesyldiphosphatesynthetase [Kluyveromyces lactis] gi|49640431|emb|CAH02888.1| KLLA0A06732p [Kluyveromyces lactis] gi|1092509|prf||2024223A farnesyl diphosphate synthase Length = 349 Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%) Query: 37 DRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +R LS + YALL G K S L E + +G IE + Y L+ DD+ M Sbjct: 50 NRGLSVVDTYALLKGYKSVSELSAE-------EYKKVAILGWCIELLQAYFLVADDM--M 100 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLT 151 D RRG+P + +V + G+ + AF + + LK + R++ +L L Sbjct: 101 DQSITRRGQPCWY----KVENV--GDIAINDAFMLEGAIYCLLKKHFRTEPYYVDLLELF 154 Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK------MKTGALMCFACESGAIMAHAS 203 H++ Q LG Q+LD+ D+ + F ++K KT A F M A Sbjct: 155 HDVTFQTELG-QLLDLITAPEDKVDLSKFSLEKHSFIVIFKT-AYYSFYLAVALAMFAAG 212 Query: 204 QNEKERLRCFGE---NLGIIFQLADDLLDC 230 + + L+ + LG FQ+ DD LDC Sbjct: 213 ITDSKDLKQASDVLIPLGEYFQIQDDFLDC 242 >gi|255715471|ref|XP_002554017.1| KLTH0E12430p [Lachancea thermotolerans] gi|238935399|emb|CAR23580.1| KLTH0E12430p [Lachancea thermotolerans] Length = 326 Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 12/215 (5%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV-NHLTALRVGAAIEC 81 L A H ++ L Y GK R+ L+ S + + +H A+ + +E Sbjct: 11 LANEAPHWTSEEESNLRRPFDYLTSSPGKNFRAELIQIFNSFYELPDHRIAI-ISKLVET 69 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H SL+ DD+ D+ RRG H+ Y I N + YA E + D Sbjct: 70 LHTSSLLIDDIE--DSSEWRRGLKAAHLVYGVPMTINTANYMYFYAMECLKELGNGCDDL 127 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKM--KTGALMCFACESGA 197 ++L+ + N + + GQ LDI +D F+ T+ + + KTG L Sbjct: 128 SLNKLL--IIFNEEMMDLHRGQGLDIYWRDCFMVPTEPEYLNMVMNKTGGLFRLTVRLME 185 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + + K L LGI++Q+ DD ++ ++ Sbjct: 186 VFSPSFSGAKS-LVPLSNLLGILYQIRDDFMNLQD 219 >gi|320006988|gb|ADW01838.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331] Length = 351 Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust. Identities = 50/242 (20%), Positives = 100/242 (41%), Gaps = 31/242 (12%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRS-FLVTECASLF 65 + E +R+D +L + + A D + + + GK++R+ F + Sbjct: 8 MAEFKERVDDVLRVFVAREAERFAAVDPVLDPVAGQLESSAAHGKRLRAAFCYWGWRATG 67 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-------------IQYD 112 + + +R A++E +H +++HDDL +D+ +R G PT H + Sbjct: 68 QPDDESLVRAAASMELVHAAAVVHDDL--IDDSPLRHGLPTAHMALRGAARGRPRSVSAG 125 Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDE 170 A++ G+ L+ A ++ ++ R++ + S + ++ G+ L+I Sbjct: 126 RSLAMLVGDLLMGLAGQLFATSGLPAAYLARARPLWSALA----RDLIAGECLEILRTGA 181 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR----CFGENLGIIFQLADD 226 D + + KT + E ++ A ER+R +G LG FQL DD Sbjct: 182 APDTADSLKVIRYKTAK---YTVEQPLLIGGALAGAGERVRSGYSAYGLPLGEAFQLRDD 238 Query: 227 LL 228 L+ Sbjct: 239 LV 240 >gi|184201140|ref|YP_001855347.1| polyprenyl synthase [Kocuria rhizophila DC2201] gi|183581370|dbj|BAG29841.1| polyprenyl synthase [Kocuria rhizophila DC2201] Length = 370 Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 35/220 (15%) Query: 38 RLLSAIRYALLGGKKIRSFL--VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 RL+ A+ GGK++R+ L A+ + A++E +LIHDD+ + Sbjct: 46 RLVDAVGQLTEGGKRLRARLCHWGWRAAGGEAGSDVVVAAAASLELFQTAALIHDDI--L 103 Query: 96 DNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQL- 138 D RRG+P+VH ++ + A++ G+ L++A ++ + ++ Sbjct: 104 DRSDTRRGRPSVHRVFEALHRESGWAADPAHFGVSAAVLTGDMSLSFAEQLFADAAARVA 163 Query: 139 -KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES-- 195 + R++ + S ++ GQ LDI E Q + ++ + Sbjct: 164 PQAGARAREIFSTMRT----EVMAGQYLDIHAEVAPPAAEPARQLERAMTVLRYKSAKYS 219 Query: 196 -------GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA +A A + F LG FQL DD+L Sbjct: 220 VEHPVAIGAALAGADEAFLRACAAFTLPLGEAFQLRDDVL 259 >gi|299115584|emb|CBN75787.1| Farnesyl pyrophosphate synthase [Ectocarpus siliculosus] Length = 499 Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 25/214 (11%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAAIECIHCYSL 87 D + + Y GGK R V + F + LR +G +E + + L Sbjct: 187 DWIQENLEYNTKGGKMNRGMGVVDVLRAFAEANGRELRHEEVCRGSILGWCVEWLQAFFL 246 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 + DD+ MD RRG+P + + +V I + + A + +N QL Sbjct: 247 VADDV--MDRSLTRRGQPCWY-KVPKVQEIAINDSFILEAHVFKMLKRHFAHENYYLQL- 302 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFID---------ETQVFMIQKMKTGALMCF-ACESGA 197 + L H++ + +G Q+LD+ + +D + MI + KT + C G Sbjct: 303 VELFHDVTYRTEMG-QLLDLTSQPMDAPSDLTRFTPVRYRMIVRYKTAYYTFYLPCAIGM 361 Query: 198 IMAHASQNEKERL-RCFGENLGIIFQLADDLLDC 230 I A RL R +G FQ+ DD LDC Sbjct: 362 IYAGVKDPASYRLARDICCRIGEFFQIQDDYLDC 395 >gi|260185898|ref|ZP_05763372.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis CPHL_A] gi|289446570|ref|ZP_06436314.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis CPHL_A] gi|289419528|gb|EFD16729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis CPHL_A] Length = 325 Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 49 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG Y F S ++L + + + ++ GQM Sbjct: 107 NTRWTNNFAILAGG----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216 Query: 225 DDLLDCEED 233 D++ D Sbjct: 217 RDIIAISGD 225 >gi|320168042|gb|EFW44941.1| geranylgeranyl pyrophosphate synthetase [Capsaspora owczarzaki ATCC 30864] Length = 314 Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%) Query: 34 QHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 Q LL Y + GK++R+ L+ ++ + ++ +H SL+ DD+ Sbjct: 5 QQQKTLLEPYTYLTSVPGKEVRTILIRAFDQWMHIPTKELDEIKGIVQMLHSASLLIDDI 64 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 DN +RRG P H+ Y + I N A E + LK N + + + + T Sbjct: 65 --EDNSKLRRGVPVAHLIYGVPSTINCANYAYFLALERV------LKLN-KPEAVAAFTE 115 Query: 153 NIGLQGMLGGQMLDI--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 L + GQ LDI +D + E + + K KTG L + +M S+N + Sbjct: 116 E--LLELHRGQGLDIWWRDSNVCPTEEEYREMVKRKTGGLFRLSVR---LMQAFSEN-RS 169 Query: 209 RLRCFGENLGIIFQLADDLLDCE 231 + LG+ FQ+ DD + E Sbjct: 170 NFVPLLDALGLYFQIRDDFANLE 192 >gi|315504571|ref|YP_004083458.1| polyprenyl synthetase [Micromonospora sp. L5] gi|315411190|gb|ADU09307.1| Polyprenyl synthetase [Micromonospora sp. L5] Length = 360 Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 56/241 (23%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVG 76 T +DD LL A ++ + L GGK++R +F V+ + Sbjct: 35 TAVDDGLLPVAEAIEA-----------FVLGGGKRLRPAFGYWGYRGAGGVDSDQVVATL 83 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVTAIIAG 120 AA+E + +LIHDDL MD RRG+P +H ++ + AI+ G Sbjct: 84 AALEFVQASALIHDDL--MDRSDTRRGEPAMHRRFAARHRTAGWGGDADSFGDAAAILLG 141 Query: 121 NGLLTYAFEIISS----PKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171 + L ++ E++ S P T + D +R+++ + GQ LD+ + Sbjct: 142 DLCLVWSDELLHSSGLPPATVARARPVFDEMRTEVTV-------------GQYLDVLTQA 188 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL----RCFGENLGIIFQLADDL 227 +T + K+ + E ++ A + +G LG FQL DD+ Sbjct: 189 TGDTSLDRAAKVARYKSAKYTVERPLLLGAALAGAPPEVHAAYSAYGLPLGEAFQLRDDV 248 Query: 228 L 228 L Sbjct: 249 L 249 >gi|302868959|ref|YP_003837596.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] gi|302571818|gb|ADL48020.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] Length = 360 Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 56/241 (23%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVG 76 T +DD LL A ++ + L GGK++R +F V+ + Sbjct: 35 TAVDDGLLPVAEAIEA-----------FVLGGGKRLRPAFGYWGYRGAGGVDSDQVVATL 83 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVTAIIAG 120 AA+E + +LIHDDL MD RRG+P +H ++ + AI+ G Sbjct: 84 AALEFVQASALIHDDL--MDRSDTRRGEPAMHRRFAARHRTAGWGGDADSFGDAAAILLG 141 Query: 121 NGLLTYAFEIISS----PKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171 + L ++ E++ S P T + D +R+++ + GQ LD+ + Sbjct: 142 DLCLVWSDELLHSSGLPPATVARARPVFDEMRTEVTV-------------GQYLDVLTQA 188 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL----RCFGENLGIIFQLADDL 227 +T + K+ + E ++ A + +G LG FQL DD+ Sbjct: 189 TGDTSLDRAAKVARYKSAKYTVERPLLLGAALAGAPPEVHAAYSAYGLPLGEAFQLRDDV 248 Query: 228 L 228 L Sbjct: 249 L 249 >gi|255716258|ref|XP_002554410.1| KLTH0F04642p [Lachancea thermotolerans] gi|238935793|emb|CAR23973.1| KLTH0F04642p [Lachancea thermotolerans] Length = 351 Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 27/207 (13%) Query: 37 DRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +R LS + YA+L GKK F + L G IE + Y L+ DD+ M Sbjct: 52 NRGLSVVDSYAILKGKKSYE--ELSEEEYFKLATL-----GWCIELLQAYFLVADDM--M 102 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D RRG+P + + +EV I + + I K K + +L L H++ Sbjct: 103 DKSITRRGQPCWY-RVEEVGEIAINDAFMLEG-AIYCLLKNHFKQDSYYVELLELFHDVT 160 Query: 156 LQGMLGGQMLDI---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 Q LG Q+LD+ D+F + F++ + KT A F M A ++ Sbjct: 161 FQTELG-QLLDLITAPEDNVDLDKFSLDRHSFIV-RFKT-AYYSFYLPVALAMHAAGISD 217 Query: 207 KERLRCFGE---NLGIIFQLADDLLDC 230 L+ + LG FQ+ DD LDC Sbjct: 218 ARDLKQAQDVLIPLGEYFQIQDDYLDC 244 >gi|78191047|gb|ABB29848.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana sanderae] Length = 234 Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 22/175 (12%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A +G IE + Y L+ DD+ MDN + RRG+P + + +V I +G+L + Sbjct: 2 ASALGWRIEWLQAYFLVLDDI--MDNSHTRRGQPCWY-KLPKVGMIAVNDGIL-----LR 53 Query: 132 SSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDE---------TQVF 178 + LK++ R++ +L L + + Q GQM+D+ + E T Sbjct: 54 NHITRILKNHFRAKPYYVDLLDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLPTHRR 112 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++Q +MA + ++ ++ +GI FQ+ DD LDC D Sbjct: 113 IVQYKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFAD 167 >gi|328714372|ref|XP_001947385.2| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Acyrthosiphon pisum] Length = 327 Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 20/197 (10%) Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 H +LL Y + + GK+IR+ L + +G ++ +H SL+ DD+ Sbjct: 31 HIIKLLQPFTYIMQVPGKQIRAKLAHAFNYWLKIPSDKLAVIGDIVQMLHNSSLLTDDI- 89 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 DN +RRG P H Y + I A N + A E S + + ++ +L L Sbjct: 90 -QDNSVLRRGIPVAHSIYGVASTINAANYMSFVALERTLSLGHPMATTVYTEQVLELHRG 148 Query: 154 IGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G++ + +D + DE + I+ KTG L A + + S N+ + Sbjct: 149 QGME-------IYWRDNYTCPTEDEYKKMTIR--KTGGLFMLAIRLMQLFS-DSTNDFTK 198 Query: 210 LRCFGENLGIIFQLADD 226 L LG+ FQ+ DD Sbjct: 199 LTGI---LGLYFQIRDD 212 >gi|67541280|ref|XP_664414.1| hypothetical protein AN6810.2 [Aspergillus nidulans FGSC A4] gi|40739019|gb|EAA58209.1| hypothetical protein AN6810.2 [Aspergillus nidulans FGSC A4] gi|259480406|tpe|CBF71507.1| TPA: ThiJ/PfpI family protein (AFU_orthologue; AFUA_3G01210) [Aspergillus nidulans FGSC A4] Length = 933 Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 15/151 (9%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 + +H SL+ DD+ D+ +RRG+P H + I + N LL A + + + L Sbjct: 403 QSLHNASLMLDDI--EDHSPLRRGRPATHTIFGAEQTINSANYLLIDAMQKVRA----LD 456 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACES 195 D + + L HN+ + GQ D+ Q + E + + ++KT L Sbjct: 457 DPVCLDIYLEEMHNLFV-----GQSFDLYWTRQGQCPSEDEYLAMVRLKTSGLFRLLTRL 511 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADD 226 A +A + RL ++LG FQ+ DD Sbjct: 512 MAQIAPVQRGLDRRLSNLSDSLGEFFQIRDD 542 >gi|325190513|emb|CCA25012.1| farnesyl pyrophosphate synthetase putative [Albugo laibachii Nc14] Length = 345 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 24/208 (11%) Query: 41 SAIRYALLGGKKIRSFLVTECA-SLFNVNHLTALR-----VGAAIECIHCYSLIHDDLPS 94 + Y LGGK R LV ECA SLF ++ +G IE + + LI DD+ Sbjct: 40 EVMEYNCLGGKLNRGLLVVECAKSLFGEELSPEIKRKANILGWCIELVQAFFLIADDI-- 97 Query: 95 MDNGYIRRGKPTVH-IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MDN +RRG+ + + E+TA+ + ++ F I+ + ++ I ++ L + Sbjct: 98 MDNSLMRRGQICWYKLPKVELTAVNDAFLMESFVFRIL---RLHFRNEITYTDIIHLFQD 154 Query: 154 IGLQGMLGGQMLDIQDEFID---ETQVFMIQ------KMKTGALMCFACESGAIMAHASQ 204 + GQ+LD+ + ++ + F ++ + KT + + A++ Sbjct: 155 -TIHRTEMGQLLDLTSQPLNAPSDLSRFTVERYRKIVRYKTAYYTFYLPLACAMLLRGIL 213 Query: 205 NEK--ERLRCFGENLGIIFQLADDLLDC 230 +E + + +G FQ+ DD LDC Sbjct: 214 DEPSHQVAQDICMEIGEYFQIQDDFLDC 241 >gi|269977242|ref|ZP_06184215.1| dimethylallyltransferase [Mobiluncus mulieris 28-1] gi|307700943|ref|ZP_07637968.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16] gi|269934545|gb|EEZ91106.1| dimethylallyltransferase [Mobiluncus mulieris 28-1] gi|307613938|gb|EFN93182.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16] Length = 360 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 31/206 (15%) Query: 47 LLGGKKIRSF--LVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 LL GK+ R+ + AS V+ L +G +E +++HDD+ +D IR Sbjct: 47 LLRGKRFRAIGAYIGWIASGGTVSPQIPGCLLDLGTCLELFQASAIVHDDI--IDEARIR 104 Query: 102 RGKPTVHI-----------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 RG P+ I ++ E AI+ G+ L A +S L D+ R Q + L Sbjct: 105 RGLPSAQIAFMTSSPAGGPKFGESAAILWGDLLFAAANSYFASAVKGL-DSARLQALGQL 163 Query: 151 THNIGLQGMLG-GQMLDIQDEFID---------ETQVFMIQKMKTGALMCFACESGAIMA 200 + +Q + GQ LD+ E D E+ + +I+ + GA +A Sbjct: 164 Y--VTMQAEVAYGQYLDLFAESRDLTADVPPSKESAMEVIRHKTARYSVVIPILIGAALA 221 Query: 201 HASQNEKERLRCFGENLGIIFQLADD 226 A+ + +L F LGI +QL DD Sbjct: 222 GATPDLLVKLEDFSTPLGIAYQLRDD 247 >gi|93278758|pdb|2AZJ|A Chain A, Crystal Structure For The Mutant D81c Of Sulfolobus Solfataricus Hexaprenyl Pyrophosphate Synthase gi|93278759|pdb|2AZJ|B Chain B, Crystal Structure For The Mutant D81c Of Sulfolobus Solfataricus Hexaprenyl Pyrophosphate Synthase Length = 289 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 20/156 (12%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIE +H SL D+ +D RRG + Y I N L+ A II + Sbjct: 77 AIEILHSASLALCDIVDLDA--TRRGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGD 134 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 D + + + L ++G ++D + D + ++KTG+L S Sbjct: 135 --DALNTSIELWKDTSVGA----------LRDMY-DNSDYIRTIELKTGSLFKL---STV 178 Query: 198 IMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCE 231 + A+AS+ N K+++ G+ LGII+Q+ DD +D + Sbjct: 179 LSAYASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 214 >gi|78191061|gb|ABB29855.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana sanderae] Length = 234 Score = 43.1 bits (100), Expect = 0.028, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 22/175 (12%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A +G IE + Y L+ DD+ MDN + RRG+P + + +V I +G+L + Sbjct: 2 ASALGWCIEWLQAYFLVLDDV--MDNSHTRRGQPCWY-KLPKVGMIAVNDGIL-----LR 53 Query: 132 SSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDE---------TQVF 178 + LK++ R++ +L L + + Q GQM+D+ + E T Sbjct: 54 NHITRILKNHFRAKPYYVDLLDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLPTHRR 112 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++Q +MA + ++ ++ +GI FQ+ DD LDC D Sbjct: 113 IVQYKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFAD 167 >gi|213513990|ref|NP_001133850.1| Farnesyl pyrophosphate synthetase [Salmo salar] gi|209155566|gb|ACI34015.1| Farnesyl pyrophosphate synthetase [Salmo salar] Length = 359 Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 89/219 (40%), Gaps = 32/219 (14%) Query: 37 DRLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIH 89 +RL + Y GGK+ R ++ L LT AL VG IE + + L+ Sbjct: 49 NRLREVLHYNTPGGKRNRGLSVIGSLRELVPPTELTQDAVRRALLVGWCIELLQAFFLVA 108 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--- 146 DD+ MD RRG+P + + E + A N +F + S L+ + R+Q Sbjct: 109 DDI--MDASVTRRGQPCWYKR--ERVGLDAIND----SFLLEGSIYRLLRRHCRAQPYYV 160 Query: 147 -MLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM-----IQKMKTGALMCFACESGA 197 +L L Q LG Q LD+ ID + M I K KT A F A Sbjct: 161 HLLELFTETSFQTELG-QALDLMTAPPGQIDLNRFTMERYKAIVKYKT-AFYSFYLPVAA 218 Query: 198 IMAHA---SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 M A S+ E + +G FQ+ DD LDC D Sbjct: 219 AMYMAGIDSEEEHNNAKHILLEMGEFFQIQDDYLDCYGD 257 >gi|296129905|ref|YP_003637155.1| Polyprenyl synthetase [Cellulomonas flavigena DSM 20109] gi|296021720|gb|ADG74956.1| Polyprenyl synthetase [Cellulomonas flavigena DSM 20109] Length = 372 Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 13/78 (16%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA--------LRVGAAIECIHCYSLIHD 90 L+ A+ + GGK++R+ C + + T LR GAA+E +L HD Sbjct: 43 LVDAVERMVAGGKRLRAAF---CYWSWRAHGGTPGDGREQGVLRAGAALELFQAAALFHD 99 Query: 91 DLPSMDNGYIRRGKPTVH 108 D+ MD+ RRG PT H Sbjct: 100 DV--MDDSSTRRGLPTAH 115 >gi|294995177|ref|ZP_06800868.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis 210] Length = 325 Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 49 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIGASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216 Query: 225 DDLLDCEED 233 D++ D Sbjct: 217 RDIIAISGD 225 >gi|170027724|ref|XP_001841747.1| farnesyl-pyrophosphate synthetase [Culex quinquefasciatus] gi|167862317|gb|EDS25700.1| farnesyl-pyrophosphate synthetase [Culex quinquefasciatus] Length = 380 Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 80/204 (39%), Gaps = 21/204 (10%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNH-LT------ALRVGAAIECIHCYSLIHDDLPS 94 A++Y + GKK R + +H LT A +G IE LI DD+ Sbjct: 78 ALQYNVPQGKKNRGLAAVLAYRMLAKSHELTPENIRRAHYLGWCIEMFQSVFLICDDV-- 135 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD RRG+P + + D+V + L+ A I K Q D ++ + + I Sbjct: 136 MDGSQTRRGQPCWY-KVDDVKLTAVNDALMLDA-AIFHVLKKQFGDEPYYNKLVEMFNEI 193 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKER 209 +G Q LD+Q +D TQ M I KT A F M N+ E Sbjct: 194 KFITTVG-QSLDLQSAKLDVTQYTMDLYKSIVSHKT-AYYTFYLPVALAMHMTGFNDPEV 251 Query: 210 LRCFGE---NLGIIFQLADDLLDC 230 R +G FQ DD LDC Sbjct: 252 FRQTKTILLEIGRFFQAQDDFLDC 275 >gi|145595766|ref|YP_001160063.1| polyprenyl synthetase [Salinispora tropica CNB-440] gi|145305103|gb|ABP55685.1| Polyprenyl synthetase [Salinispora tropica CNB-440] Length = 360 Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust. Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 54/251 (21%) Query: 14 KRIDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIR---SFLVTECASLFNV 67 +R+D L D L+ + M L A+ + L GGK++R ++ A + Sbjct: 17 QRVDKALADFLVTRRAWMTDVDASLAPLADAVEAFVLGGGKRLRPAFAYWGYRGAGGIDT 76 Query: 68 NHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE------------- 113 + TAL AA+E + +LIHDDL +D RRG+P VH+++ Sbjct: 77 EQVATAL---AALEFVQASALIHDDL--IDRSDTRRGEPAVHLRFTARHRSAGWDGDAAG 131 Query: 114 ---VTAIIAGNGLLTYAFEIISS----PKTQLK-----DNIRSQLMLSLTHNIGLQGMLG 161 AI+ G+ L ++ E++ S P T + D +R+++ + Sbjct: 132 FGDAAAILLGDLCLVWSDELLHSAGLDPHTVARARPIFDQMRTEVTV------------- 178 Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGENL 217 GQ LD+ + +T V K+ + E ++ A + + +G L Sbjct: 179 GQYLDVLTQATGDTSVERAGKVARYKSAKYTVERPLLLGAALADATPEIHAAYSAYGLPL 238 Query: 218 GIIFQLADDLL 228 G FQL DD+L Sbjct: 239 GEAFQLRDDVL 249 >gi|289704967|ref|ZP_06501382.1| polyprenyl synthetase [Micrococcus luteus SK58] gi|289558303|gb|EFD51579.1| polyprenyl synthetase [Micrococcus luteus SK58] Length = 371 Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 30/153 (19%) Query: 39 LLSAIRYALLGGKKIRSFLVT--ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L+ AI GGK++R+ L A+ GAA E +LIHDD+ +D Sbjct: 47 LVDAIADLTAGGKRLRAVLAWLGWRAAGGEAEDPRIAEAGAAFELFQAAALIHDDI--LD 104 Query: 97 NGYIRRGKPTVHIQYDEV----------------TAIIAGN---GLLTYAFEIISSPKTQ 137 RRG P+VH +++ + AI+AG+ G+ AF + + T Sbjct: 105 RSDTRRGMPSVHRRFESLHREAGWRHAAEHFGVSAAILAGDVALGMSETAFARVLA-GTP 163 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170 +D R++L G++ GQ LD+ E Sbjct: 164 REDRARAELERMRF------GVMAGQYLDVVAE 190 >gi|255988559|gb|ACU51163.1| farnesyl pyrophosphate synthase [Nicotiana tabacum] Length = 234 Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 22/175 (12%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A +G IE + Y L+ DD+ MDN + RRG+P + + +V I +G+L + Sbjct: 2 ASALGWRIEWLQAYFLVLDDI--MDNSHTRRGQPCWY-KLPKVGMIAVNDGIL-----LR 53 Query: 132 SSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-------- 179 + LK++ R++ +L L + + Q GQM+D+ + E + Sbjct: 54 NHITRILKNHFRAKPYYVDLLDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLPIHRR 112 Query: 180 IQKMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I + KT + + A+ MA + ++ ++ +GI FQ+ DD LDC D Sbjct: 113 IVQYKTAYYSFYLPAACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFAD 167 >gi|260814652|ref|XP_002602028.1| hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae] gi|229287333|gb|EEN58040.1| hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae] Length = 357 Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 32/218 (14%) Query: 38 RLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHD 90 R + Y GGK+ R ++T L + + LT A+ VG IE + + L+ D Sbjct: 48 RFRQVLEYNCPGGKRNRGLSVITSYRFLVSSDQLTEENIHRAMVVGWCIEWLQAFFLVLD 107 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL---- 146 D+ MD RRG+P + + +EV GN + A I S L+ R Q Sbjct: 108 DI--MDQSQTRRGQPCWY-RVEEV-----GNMAINDACYIESCIYRLLRRFCRGQPYYVD 159 Query: 147 MLSLTHNIGLQGMLGGQMLDI---QDEFID-----ETQVFMIQKMKTGALMCFACESGAI 198 +L L + ++G Q LD+ D ++ E + I K KT A F A Sbjct: 160 LLELFQGTTYKTIVG-QSLDLITSPDGKVNLSNFTEERYNAIVKYKT-AFYSFHLPVAAA 217 Query: 199 MAHA---SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 M A S+ E + +G FQ+ DD LDC D Sbjct: 218 MYMAGITSKESHENAKTILLEMGRFFQIQDDYLDCYGD 255 >gi|300866343|ref|ZP_07111044.1| trans-hexaprenyltranstransferase [Oscillatoria sp. PCC 6506] gi|300335648|emb|CBN56204.1| trans-hexaprenyltranstransferase [Oscillatoria sp. PCC 6506] Length = 323 Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 8/156 (5%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ E IH SL+HDD +D+ +RRG PTVH + A++AG+ L + +++ Sbjct: 72 RLAEITEMIHTASLVHDD--VVDDSDVRRGIPTVHSYFGNRVAVLAGDFLFAQSSWYLAN 129 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + S++++ L QG+ G + +++++ KT +L+ + Sbjct: 130 LDNLEVVKLLSEVIMDLAEGEIQQGLNGFDTTLSIEAYLEKSY------YKTASLIANSS 183 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ ++ S + L +G ++G+ FQ+ DD+LD Sbjct: 184 KAAGCLSGVSAQLADDLYNYGRDIGLAFQIVDDILD 219 >gi|221116455|ref|XP_002156744.1| PREDICTED: similar to Pdss1 protein, partial [Hydra magnipapillata] Length = 199 Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GK R L+ A NV+ L++ E IH SL+HDD+ +D+ +RR Sbjct: 92 GKLFRPVLIVLMAKALNVHQQNTSDLLECQLKMAMIAEMIHTASLLHDDV--IDDAVLRR 149 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 KP+V+ + +I+AG+ +L A ++S Sbjct: 150 NKPSVNQIFSSKQSILAGDFILARASILLS 179 >gi|307324121|ref|ZP_07603330.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306890570|gb|EFN21547.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 378 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 16/193 (8%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK +R L CA + A+ A+E +H +SL+HDD+ MD RR +PTV Sbjct: 84 GGKGVRQALAVLCAEAAGASGEAAVAGAVAVELVHTFSLLHDDI--MDGDQTRRTRPTVW 141 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y A++AG+ + + ++ L ++ GQ D+ Sbjct: 142 KAYGTGPAVLAGD------ALFALAVEALAAVPGAGAAAAVRRLSVALGDLVRGQADDLL 195 Query: 169 DEFIDETQVFMI-----QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 E T + ++M KTGAL+ A GA +A A ++ L G ++G+ Sbjct: 196 FESRPWTGATAVGPEEYRRMAEHKTGALLGCAAALGAALAGAPESTAAALDRAGRHMGVA 255 Query: 221 FQLADDLLDCEED 233 FQ+ADDLL D Sbjct: 256 FQVADDLLGIWGD 268 >gi|45709211|gb|AAH67768.1| GGPS1 protein [Homo sapiens] Length = 300 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + Q + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHQDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++Q KTG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 175 PLLNTLGLFFQIRDD 189 >gi|315655468|ref|ZP_07908367.1| polyprenyl synthetase [Mobiluncus curtisii ATCC 51333] gi|315490123|gb|EFU79749.1| polyprenyl synthetase [Mobiluncus curtisii ATCC 51333] Length = 361 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 30/177 (16%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----------QYDEVTAIIAGN 121 L +GA++E +L+HDD+ +DN RRG P I ++ + AI+ G+ Sbjct: 79 LDLGASLELFQTSALVHDDI--IDNAIKRRGLPAAQIAFMTSFPMGGPRFGDSAAILWGD 136 Query: 122 GLLTYAFEIISSPKTQLK-DNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173 L A S + L +N S L +++ + GQ LD+ E + Sbjct: 137 LLYAAANSYFSQAISTLSMENAHRASNLFVTMQAEVAY-----GQFLDLSAETRELSPDM 191 Query: 174 ----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E + +I+ + GA + AS + E+L F LG+ +QL DD Sbjct: 192 PPSREAAMEIIKHKTARYSVVIPLLLGAALRGASDSLIEQLEGFATPLGVAYQLRDD 248 >gi|254581250|ref|XP_002496610.1| ZYRO0D04070p [Zygosaccharomyces rouxii] gi|238939502|emb|CAR27677.1| ZYRO0D04070p [Zygosaccharomyces rouxii] Length = 322 Score = 42.7 bits (99), Expect = 0.037, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 77/185 (41%), Gaps = 17/185 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK RS L+ ++ + ++ + +H SL+ DD+ D+ RRG PT H Sbjct: 34 GKSFRSKLINVFNEIYQIPIEKTNQISTLVAILHNASLLIDDIE--DSSATRRGIPTSHT 91 Query: 110 QYDEVTAIIAGNGLLTYAFEIISS----PKTQLKD--NIRSQLMLSLTHNIGLQGMLGGQ 163 + I A N + A EI+ + K L D I +Q M++L GL Sbjct: 92 LFGVPLTINAANYMYFKAMEILQTISGDDKILLHDLMVIFNQEMINLHRGQGLDIYWRDN 151 Query: 164 MLDIQDEFI-DETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIF 221 +L +FI DE + + KTG L IM + E L LGII+ Sbjct: 152 LL----QFIPDEATYYNMVMNKTGGLFRLTVR---IMELLTDVELPHSLVPLSNLLGIIY 204 Query: 222 QLADD 226 Q+ DD Sbjct: 205 QIRDD 209 >gi|238603525|ref|XP_002395972.1| hypothetical protein MPER_03878 [Moniliophthora perniciosa FA553] gi|215467625|gb|EEB96902.1| hypothetical protein MPER_03878 [Moniliophthora perniciosa FA553] Length = 232 Score = 42.7 bits (99), Expect = 0.037, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK RS++V C S + + AAIE +H SL+ DD+ D RRG VH Sbjct: 150 GGKSWRSYIVLACLSALGKDPEPFKPLLAAIELLHTGSLVIDDI--QDESPTRRGVTAVH 207 Query: 109 IQYDEVTAIIAGNG 122 + TAI AG Sbjct: 208 HVWGVPTAINAGTA 221 >gi|217072134|gb|ACJ84427.1| unknown [Medicago truncatula] Length = 251 Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 28/215 (13%) Query: 34 QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86 Q DR+L Y + GGK R L+ E +L + A +G IE + Y Sbjct: 33 QWVDRMLD---YNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFQASALGWCIEWLQAYF 89 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+ DD+ MDN + RRG+P + + +V I A +G+L I + K Sbjct: 90 LVLDDI--MDNSHTRRGQPCWY-RVPKVGMIAANDGVLLRN-HIPRILRKHFKGKPYYVE 145 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGALMCF---ACES 195 +L L + + Q GQM+D+ E + I + KT + AC Sbjct: 146 LLDLFNEVEFQTA-AGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVAC-- 202 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +MA + + ++ +G FQ+ DD LDC Sbjct: 203 ALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDC 237 >gi|8574390|emb|CAB94793.1| geranylgeranyl pyrophosphate synthase [Mycobacterium aurum] Length = 371 Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 50/183 (27%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVTAIIAGN 121 ++E +H ++L+ DD+ MD +RRG+P+ H ++ E A++ G+ Sbjct: 93 SLELLHAFALLQDDV--MDESPMRRGRPSAHRAFERWHRERGLPGSSARFGESAAVLLGD 150 Query: 122 GLLTYAFEII------------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 L +A +++ + P+ D +R++L + GQ D+ + Sbjct: 151 LCLVWAEQMLRESGVDEAALTRAWPR---YDAMRTELAV-------------GQFADLVN 194 Query: 170 E---FIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + F +V + + K+G E GA +A L +GE +G FQL D Sbjct: 195 DTAGFPQLDEVLDVARRKSGNYTVRRPLEIGAALAGCDAEVITVLGRYGEAIGEAFQLRD 254 Query: 226 DLL 228 DLL Sbjct: 255 DLL 257 >gi|295656234|gb|AAK11525.2|AF279807_1 geranylgeranyl pyrophosphate synthase [Penicillium paxilli] Length = 375 Score = 42.7 bits (99), Expect = 0.039, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 13/181 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R+ L+ S V + + + +H SL+ DD+ DN +RRG P H Sbjct: 88 GKDVRTQLIQAFNSWLQVPPESLAIISKVVTMLHTASLLIDDV--EDNSVLRRGVPVAHN 145 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I + N + A + I K +I + +L+L G+ + + Sbjct: 146 IFGTAQTINSANYVYFLALQEIQQLKNPAAIDIYVKELLNLHRGQGMDLFWRDTLTCPTE 205 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE+++ M+ KTG L A + +M S K+ + +G+IFQ+ DD L Sbjct: 206 DEYLE-----MVGN-KTGGLFRLAVK---LMQAESSTGKDCVSLVNV-MGLIFQICDDYL 255 Query: 229 D 229 + Sbjct: 256 N 256 >gi|167391930|ref|XP_001739954.1| geranylgeranyl pyrophosphate synthetase [Entamoeba dispar SAW760] gi|165896168|gb|EDR23665.1| geranylgeranyl pyrophosphate synthetase, putative [Entamoeba dispar SAW760] Length = 349 Score = 42.7 bits (99), Expect = 0.039, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 41/187 (21%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV-------HIQ-------------- 110 +R A+E +H +L HDD+ MD +RR PTV +++ Sbjct: 69 VIRTACAMELLHDSTLAHDDI--MDEDELRRNAPTVVKTFYDKYVERNKEDVKTEKFLFI 126 Query: 111 -----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 Y AI+ GN L + A + + + ++++L L + GQ+L Sbjct: 127 SRGTTYASSIAIMVGNILYSMAQRLCLESGSNI-----AEMLLELFDVLNY-----GQIL 176 Query: 166 DIQ-DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 D+ +++ ++ +I MKT G +A S+++ E + +GE+ GI FQ+ Sbjct: 177 DMSCLSTVEDYKLNVI--MKTAIFFKTTACIGLTLAGRSEHDIEIGKEWGEHFGIAFQMR 234 Query: 225 DDLLDCE 231 DDLLD + Sbjct: 235 DDLLDID 241 >gi|331251210|ref|XP_003338205.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309317195|gb|EFP93786.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 503 Score = 42.7 bits (99), Expect = 0.039, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 11/188 (5%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IRS ++ +V V + +H SL+ DD+ D +RRG P H Sbjct: 213 GKEIRSMMIDAFNHWLSVPTEQLNIVKRIVGLLHTASLLMDDV--EDGSELRRGIPVAHK 270 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 Y I + N + A++ +S +D+ S L + N L + GQ +D+ Sbjct: 271 IYGIPQTINSANYVYFLAYQELSMLHPS-QDSSASNLWKLI--NEELLRLHRGQGMDLYW 327 Query: 168 QDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D T+ IQ K KTG L A + +MA + + + +GIIFQ+ D Sbjct: 328 RDSLTCPTEEEYIQMVKNKTGGLFRIAIK--LMMAMSPLQQIPDYVPLVDLIGIIFQIRD 385 Query: 226 DLLDCEED 233 DLL+ D Sbjct: 386 DLLNLSSD 393 >gi|1346030|sp|P49350|FPPS_ARTAN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|1022770|gb|AAC49452.1| farnesyl diphosphate synthase [Artemisia annua] Length = 343 Score = 42.7 bits (99), Expect = 0.040, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 28/236 (11%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71 K DT+ +L+ A + + Y + GGK R V + L L+ Sbjct: 12 KVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVVDSYQLLKGGELSDD 71 Query: 72 ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + +G IE + Y L+ DD+ MD + RRG+P + +V I A +G+L Sbjct: 72 EIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLPKVGMIAANDGILLRN 128 Query: 128 FEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---- 179 P+ LK + R + ++ L + + Q GQM+D+ + E + Sbjct: 129 ----HVPRI-LKKHFRGKPYYVDLVDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLS 182 Query: 180 ----IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230 I + KT + + A++ +K ++ +G FQ+ DD LDC Sbjct: 183 IHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDC 238 >gi|260906389|ref|ZP_05914711.1| putative geranylgeranyl pyrophosphate synthase [Brevibacterium linens BL2] Length = 354 Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust. Identities = 49/214 (22%), Positives = 94/214 (43%), Gaps = 29/214 (13%) Query: 38 RLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +L ++ + GGK IR L+ + L + A+ A++ +H +IHDD+ +D Sbjct: 39 QLWDSLTHMATGGKLIRPRLLLDAHRGLGGRDQAAAVDAACAMQLLHIALVIHDDV--ID 96 Query: 97 NGYIRRGKPTVHIQ-----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 N IRRG+ + + + + TA++ G+ +LT A +++ + Sbjct: 97 NDTIRRGEANISGEFASDALCRGAGRREAQVWGDATALLGGDLMLTLAHSLLARLEV--- 153 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDETQVFMIQKMKTGALMCFACE-- 194 D+ + + +L + + + G L + E +V + KT A+ F Sbjct: 154 DDSKRRAILDIFDDTLFRSAAGEHSDVWLSLHLEEARSQEVLEMAGQKT-AVYSFQAPLL 212 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 A++A AS + L +GI++QL DD+L Sbjct: 213 IAAVLAGASSTQTAELAAIAAQIGIVYQLRDDVL 246 >gi|1346028|sp|P49351|FPPS1_LUPAL RecName: Full=Farnesyl pyrophosphate synthase 1; Short=FPP synthase 1; Short=FPS 1; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1; AltName: Full=Dimethylallyltranstransferase 1; AltName: Full=Farnesyl diphosphate synthase 1; AltName: Full=Geranyltranstransferase 1 gi|558923|gb|AAA86687.1| farnesyl pyrophosphate synthase [Lupinus albus] Length = 342 Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 28/215 (13%) Query: 34 QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYS 86 Q DR+L Y + GGK R V + L H A +G IE + Y Sbjct: 33 QWLDRMLD---YNVPGGKLNRGLSVIDSYRLLKDGHELNDDEIFLASALGWCIEWLQAYF 89 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+ DD+ MDN + RRG+P + +V I A +G+L I K + Sbjct: 90 LVLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVLLRN-HIPRILKKHFRGKPYYAD 145 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGALMCF---ACES 195 +L L + + Q GQM+D+ E + I + KT + AC Sbjct: 146 LLDLFNEVEFQTA-SGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVAC-- 202 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +M + + ++ ++G FQ+ DD LDC Sbjct: 203 ALLMVGENLDNHIDVKNILVDMGTYFQVQDDYLDC 237 >gi|289573627|ref|ZP_06453854.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis K85] gi|289538058|gb|EFD42636.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis K85] Length = 282 Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 49 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156 Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + ++ + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216 Query: 225 DDLLDCEED 233 D++ D Sbjct: 217 RDIIAISGD 225 >gi|296939580|gb|ADH95185.1| putative farnesyl diphosphate synthase [Aquilaria microcarpa] Length = 342 Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 36/216 (16%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLT------ALRVGAAIECIHCYSLIH 89 DR+L Y + GGK R V + L N LT A +G IE + Y L+ Sbjct: 36 DRMLD---YNVPGGKLNRGLSVIDSYKLLKEGNELTEEEVFLASALGWCIEWLQAYFLVL 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--- 146 DD+ MDN + RRG+P + +V I +G+L + + LK++ R + Sbjct: 93 DDI--MDNSHTRRGQPC-WFRLPKVGLIAVNDGIL-----LRNHISRILKNHFRGKAYYV 144 Query: 147 -MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF---ACE 194 +L L + + Q G QM+D+ E + I + KT + AC Sbjct: 145 DLLDLFNEVEFQTACG-QMIDLITTLEGEKDLTKYSLSKHRRIVQYKTAYYSFYLPVAC- 202 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +M+ + + ++ ++GI FQ+ DD LDC Sbjct: 203 -ALLMSGENLDNHVDVKNILVDMGIYFQVQDDFLDC 237 >gi|21219099|ref|NP_624878.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)] gi|256789883|ref|ZP_05528314.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|289773766|ref|ZP_06533144.1| polyprenyl synthetase [Streptomyces lividans TK24] gi|6013088|emb|CAB57417.1| putative polyprenyl synthetase [Streptomyces coelicolor A3(2)] gi|289703965|gb|EFD71394.1| polyprenyl synthetase [Streptomyces lividans TK24] Length = 352 Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust. Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 35/210 (16%) Query: 43 IRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +R A GK++R+ + A + L +R A++E +H +++HDDL +D+ Sbjct: 43 LRKAAGHGKRLRAAFCYWGWRAAGQPESDAL--VRAAASMELVHAAAVVHDDL--IDDSR 98 Query: 100 IRRGKPTVHIQYDEV---------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +R G PT H+ + V A++ G+ L+ A + ++ R+ Sbjct: 99 LRHGLPTAHVALEAVLARDGRPDARTAARSLAMLVGDQLMVLAGLLFTTSGLPAAYLARA 158 Query: 145 QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACES----GAI 198 + + ++ + ++ G+ L+I D + + KT + E G + Sbjct: 159 RDLWAVL----ARELVAGECLEILHTGGPPDTGTSLKVVRYKTAK---YTVEHPLLIGGL 211 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLL 228 +A A+ ++ R + LG FQL DDLL Sbjct: 212 LAGAAPALRDTYRAYALPLGEAFQLRDDLL 241 >gi|55979982|ref|YP_143279.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB8] gi|73535442|pdb|1WMW|A Chain A, Crystal Structure Of Geranulgeranyl Diphosphate Synthase From Thermus Thermophilus gi|73535443|pdb|1WMW|B Chain B, Crystal Structure Of Geranulgeranyl Diphosphate Synthase From Thermus Thermophilus gi|73535444|pdb|1WMW|C Chain C, Crystal Structure Of Geranulgeranyl Diphosphate Synthase From Thermus Thermophilus gi|73535445|pdb|1WMW|D Chain D, Crystal Structure Of Geranulgeranyl Diphosphate Synthase From Thermus Thermophilus gi|31745059|dbj|BAC77651.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus] gi|55771395|dbj|BAD69836.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB8] Length = 330 Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 86/228 (37%), Gaps = 29/228 (12%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75 I L + LL H + D L Y GGK +R L A L Sbjct: 8 IRQALQERLLARLDHPDPLYRDLLQD---YPRRGGKMLRGLLTVYSALAHGAPLEAGLEA 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133 A+E + L+HDD+ D RRG+P +H + A+ AG+ + + +++ Sbjct: 65 ATALELFQNWVLVHDDI--EDGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAEGL 122 Query: 134 -----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF--IDETQVFM--IQKM 183 P L + + ++ L LGG L +D F + + + + Sbjct: 123 ARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTAVAPL 182 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + GAL+ A E+ LR LG FQ+ DD+L+ E Sbjct: 183 RLGALLAGKTPPAAY-------EEGGLR-----LGTAFQIVDDVLNLE 218 >gi|325289010|ref|YP_004265191.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324964411|gb|ADY55190.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 304 Score = 42.4 bits (98), Expect = 0.050, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 22/235 (9%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNV 67 +Q+N I+ ++ L+ + TQ + +S +RY + G ++ +F+ Sbjct: 1 MQDNWAMIEQMMLQLI---HDYFPTQELKKYMSEFVRYKMEGHFPFGQLVILHY-QMFDG 56 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 R AA+E + I DDL DN + P +I + V I G +L+ Sbjct: 57 QSTDIFRAAAAVELMILSLDIFDDLQDNDNFSV----PWNNIDHAIVMNIATGLLMLSTK 112 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 S T + N ++ M + N + + GQ +D+ + E + + K+G+ Sbjct: 113 ----SLEHTSFEPNKKA--MGTNYLNSCVIKAINGQHIDLLNLIESEKDYIEMVRSKSGS 166 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL-----LDCEEDLPKK 237 LM AC G A AS+N + + + E+LGII Q+ +D+ LD + DL K Sbjct: 167 LMASACLVGT--ALASENHHDVVNKYAEHLGIIAQIKNDINDIFRLDPKNDLLNK 219 >gi|300785964|ref|YP_003766255.1| polyprenyl synthetase [Amycolatopsis mediterranei U32] gi|299795478|gb|ADJ45853.1| polyprenyl synthetase [Amycolatopsis mediterranei U32] Length = 367 Score = 42.4 bits (98), Expect = 0.050, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 28/171 (16%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNG 122 +E +HC++L+ DD+ MD +RRG+ +H+ ++ E AI+ G+ Sbjct: 93 LELLHCFALVQDDV--MDGSALRRGRTALHVRFARWHEEQGWAGSAPRFGESAAILFGDL 150 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDE---FIDETQVF 178 L ++ +++ + QL H ++ L GQ+ D+ ++ + Sbjct: 151 FLVWSEQMLRESGLAAE-----QLARGWGHYDAMRAELAVGQLADLVNDARALPSWDTLL 205 Query: 179 MIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + K+G E GA +A L FG +G FQL DDLL Sbjct: 206 DVLRRKSGNYTVRRPLEFGAALAGCGPELMAGLGEFGGLVGEAFQLRDDLL 256 >gi|115738308|ref|XP_781908.2| PREDICTED: similar to Chain , Avian Farnesyl Diphosphate Synthase (Fps) (E.C.2.5.1.10) [Strongylocentrotus purpuratus] gi|115948816|ref|XP_001196369.1| PREDICTED: similar to Chain , Avian Farnesyl Diphosphate Synthase (Fps) (E.C.2.5.1.10) [Strongylocentrotus purpuratus] Length = 619 Score = 42.4 bits (98), Expect = 0.050, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 38/211 (18%) Query: 45 YALLGGKKIRSFLVTEC-----ASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 Y + GGK+ R V S+ N N TA+ +G +E + Y LI DD+ MD Sbjct: 317 YTVPGGKRNRGLTVVNAFRQLANSVQNTEDNIHTAMVLGWCVEWLQAYFLIADDM--MDQ 374 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHN 153 RRG+P + + D V GN + +F + + LK I Q ++ L H Sbjct: 375 SKTRRGQPCWYKK-DGV-----GNVAINDSFYVEACIYKLLKRYIGHQPYYVQVMELFHE 428 Query: 154 IGLQGMLGGQMLDI-----QDEFID---ETQVFMIQKMKTGALMCFACESGAIM------ 199 Q ++G Q LD+ D ++ E + I K KT + E+ A+ Sbjct: 429 TTYQTIMG-QSLDLLTSPENDRDLNRFTEQRYAAIVKWKTAFYSFYLPEALAMHMVGISD 487 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A + N K L +G FQ+ DD LDC Sbjct: 488 AKSHTNAKTILL----QMGHFFQVQDDYLDC 514 >gi|63103173|gb|AAY33492.1| bifunctional GPPS/FPPS isoprenyl diphosphate synthase precursor [Myzus persicae] Length = 362 Score = 42.4 bits (98), Expect = 0.051, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 31/217 (14%) Query: 39 LLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 L ++Y + GGKK R +++ + + N + +G +E + Y L+ DD Sbjct: 53 LAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAYQLVLDD 112 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149 + MDN RRG+P + +++++ + +G+L +++I K KD +L Sbjct: 113 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYYTHILE 166 Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199 L ++ ++ +G Q LD+ +++ E ++ K KT A F M Sbjct: 167 LFFDVTMKTAMG-QCLDMLTANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAM 223 Query: 200 AHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233 + N+ E R +G FQ+ DD LDC D Sbjct: 224 RMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 260 >gi|190149251|gb|AAY33490.3| putative mitochondrial isoprenyl diphosphate synthase precursor [Acyrthosiphon pisum] Length = 394 Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 31/217 (14%) Query: 39 LLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 L ++Y + GGKK R +++ + + N + +G +E + Y L+ DD Sbjct: 85 LAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAYQLVLDD 144 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149 + MDN RRG+P + +++++ + +G+L +++I K KD +L Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYYTHILE 198 Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199 L ++ ++ +G Q LD+ +++ E ++ K KT A F M Sbjct: 199 LFFDVTMKTAMG-QCLDMLTANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAM 255 Query: 200 AHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233 + N+ E R +G FQ+ DD LDC D Sbjct: 256 RMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292 >gi|121714909|ref|XP_001275064.1| geranylgeranyl pyrophosphate synthase (AtmG), putative [Aspergillus clavatus NRRL 1] gi|119403220|gb|EAW13638.1| geranylgeranyl pyrophosphate synthase (AtmG), putative [Aspergillus clavatus NRRL 1] Length = 359 Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 13/189 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR L++ + + I +H SL+ DD+ D+ +RRG P H Sbjct: 85 GKDIRGKLISSFNEWLKIPEQKLDIIKRVIGLLHTASLLIDDI--QDSSKLRRGFPVAHS 142 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I + N +A + + I + +L L G+ ++ + Sbjct: 143 IFGIAQTINSANFAYFWAQQELQKLGKSDALAIFTDELLRLHRGQGMDLYWRDSLICPTE 202 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +E++D M+ KTG L A + +M SQNE++ + + LGIIFQ+ DD Sbjct: 203 EEYLD-----MVSN-KTGGLFRLAIK---LMQMESQNERDCVPLV-DLLGIIFQIRDDYQ 252 Query: 229 DCEEDLPKK 237 + + DL K Sbjct: 253 NLQSDLYAK 261 >gi|15840414|ref|NP_335451.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] gi|13880584|gb|AAK45265.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551] Length = 333 Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 57 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 114 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 115 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 164 Query: 168 QD--EFIDETQ-VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 165 RGPASHIDTIEHCLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 224 Query: 225 DDLLDCEED 233 D++ D Sbjct: 225 RDIIAISGD 233 >gi|63103171|gb|AAY33491.1| bifunctional putative mitochondrial GPPS/FPPS isorpenyl diphosphate synthase precursor [Myzus persicae] Length = 394 Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 31/217 (14%) Query: 39 LLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 L ++Y + GGKK R +++ + + N + +G +E + Y L+ DD Sbjct: 85 LAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAYQLVLDD 144 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149 + MDN RRG+P + +++++ + +G+L +++I K KD +L Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYYTHILE 198 Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199 L ++ ++ +G Q LD+ +++ E ++ K KT A F M Sbjct: 199 LFFDVTMKTAMG-QCLDMLTANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAM 255 Query: 200 AHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233 + N+ E R +G FQ+ DD LDC D Sbjct: 256 RMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292 >gi|169139097|gb|ACA48701.1| farnesyl diphosphate synthase 1 [Myzus persicae] Length = 394 Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 31/213 (14%) Query: 43 IRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 ++Y + GGKK R +++ + + N + +G +E + Y L+ DD+ M Sbjct: 89 LQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAYQLVLDDI--M 146 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 DN RRG+P + +++++ + +G+L +++I K KD +L L + Sbjct: 147 DNAITRRGRPCWY-RHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYYTHILELFFD 202 Query: 154 IGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 + ++ +G Q LD+ +++ E ++ K KT A F M + Sbjct: 203 VTMKTAMG-QCLDMLTANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAMRMTN 259 Query: 204 QNEKERLRCFGE---NLGIIFQLADDLLDCEED 233 N+ E R +G FQ+ DD LDC D Sbjct: 260 INDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292 >gi|156360985|ref|XP_001625302.1| predicted protein [Nematostella vectensis] gi|156212129|gb|EDO33202.1| predicted protein [Nematostella vectensis] Length = 303 Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 22/194 (11%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L + GK++R L+ + + ++ +H SL+ DD+ DN Sbjct: 16 LLEPYKYILQVPGKQVRETLIQAFNVWLKIPEDKLKIIADVVKMLHNSSLLIDDIE--DN 73 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y I + N + A E + S ++ ++ +L L Sbjct: 74 SKLRRGIPVAHTIYGVAQTINSANYIYFKALEKVLSLNHPECIHVFTEELLELHR----- 128 Query: 158 GMLGGQMLDI--QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 GQ +DI +D + +E M++K KTG L A +M S+N+ + L Sbjct: 129 ----GQGMDIYWRDSYTCPTEEEYRDMVRK-KTGGLFRVAVR---LMQLFSENKSDFLPL 180 Query: 213 FGENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 181 L-DMLGLYFQIRDD 193 >gi|323720556|gb|EGB29637.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis CDC1551A] Length = 325 Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 16/189 (8%) Query: 49 GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GG R A L + + GAAIE +H +L HD + +D + R P+ Sbjct: 49 GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ AI+AG+ Y F S ++L + + + ++ GQM Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156 Query: 168 QD--EFIDETQ-VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + ID + + KTG+L+ + + GA ++ A++ + R+ G +G F+++ Sbjct: 157 RGPASHIDTIEHCLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216 Query: 225 DDLLDCEED 233 D++ D Sbjct: 217 RDIIAISGD 225 >gi|153791942|ref|NP_001093301.1| farnesyl diphosphate synthase 2 [Bombyx mori] gi|146424708|dbj|BAF62114.1| farnesyl diphosphate synthase 2 [Bombyx mori] Length = 382 Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust. Identities = 56/238 (23%), Positives = 93/238 (39%), Gaps = 32/238 (13%) Query: 19 ILDDLL------LQTASHMQ--TQHNDRLLSAIRYALLGGKKIR------SFLVTECASL 64 + DDLL LQ S + Q D L + Y L+GGK R S+ E Sbjct: 46 MFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEK 105 Query: 65 FNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + L A ++G +E Y ++ DD+ MD +RRG P + + EV A N Sbjct: 106 VTEHTLKMACKLGWCVEMFQAYCIVLDDI--MDGSSVRRGMPCWY-RRPEVGITCAFNDS 162 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 L + KT + N M L + + +G + + + F + + Sbjct: 163 LLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRY 222 Query: 184 KT-----GALMCF--ACESGAIMAHASQNEKERLRCFGENL----GIIFQLADDLLDC 230 T A + G ++A +N E++ +++ G +FQ+ DD +DC Sbjct: 223 YTIIKYKAAYYTYNLPVSLGLLLA---ENVDEKIYKSAQDICLEIGTMFQIQDDFIDC 277 >gi|46200288|ref|YP_005955.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB27] gi|46197916|gb|AAS82328.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB27] Length = 330 Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 86/228 (37%), Gaps = 29/228 (12%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75 I L + LL H + D L Y GGK +R L A L Sbjct: 8 IRQALQERLLARLDHPDPLYRDLLQD---YPRRGGKMLRGLLTVYSALAHGAPLEAGLEA 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133 A+E + L+HDD+ D RRG+P +H + A+ AG+ + + +++ Sbjct: 65 ATALELFQNWILVHDDI--EDGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAEGL 122 Query: 134 -----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF--IDETQVFM--IQKM 183 P L + + ++ L LGG L +D F + + + + Sbjct: 123 ARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTAVAPL 182 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + GAL+ A E+ LR LG FQ+ DD+L+ E Sbjct: 183 RLGALLAGKTPPAAY-------EEGGLR-----LGTAFQIVDDVLNLE 218 >gi|6016044|sp|O64905|FPPS_HELAN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|3002542|gb|AAC78557.1| farnesyl pyrophosphate synthase [Helianthus annuus] Length = 341 Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 33/221 (14%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIH 83 H Q D++L Y + GGK R V + L LT A +G IE + Sbjct: 30 HDSRQWIDKMLD---YNVPGGKLNRGLSVVDSYQLLKGAELTDDEIFLASALGWCIEWLQ 86 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 Y L+ DD+ MD + RRG+P + +V I A +GL+ P+ LK + R Sbjct: 87 AYFLVLDDI--MDGSHTRRGQPC-WFRLPKVGMIAANDGLILRN----HVPRI-LKKHFR 138 Query: 144 SQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF 191 + ++ L + + Q GQM+D+ + E + I + KT + Sbjct: 139 GKPYYVDLVDLFNEVEFQ-TASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFY 197 Query: 192 ACESGAIMAHASQ--NEKERLRCFGENLGIIFQLADDLLDC 230 + A++ N E E +G FQ+ DD LDC Sbjct: 198 LPVACALLMFGEDLDNHVEVKNVLVE-MGTYFQVQDDYLDC 237 >gi|164426247|ref|XP_960695.2| geranylgeranyl pyrophosphate synthetase [Neurospora crassa OR74A] gi|166214942|sp|P24322|GGPPS_NEUCR RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Albino-3 protein; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|157071260|gb|EAA31459.2| geranylgeranyl pyrophosphate synthetase [Neurospora crassa OR74A] Length = 433 Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 13/178 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IRS +V + +V + + I +H SL+ DD+ DN +RRG P H Sbjct: 146 GKDIRSQMVKAFDAWLDVPSESLEVITKVISMLHTASLLVDDV--EDNSVLRRGFPVAHS 203 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I N + YA + + K +I S+ +L+L G+ + + Sbjct: 204 IFGIPQTINTSNYVYFYALQELQKLKNPKAVSIFSEELLNLHRGQGMDLFWRDTLTCPTE 263 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D++++ M+ KTG L G + A +G+IFQ+ADD Sbjct: 264 DDYLE-----MVSN-KTGGLFRL----GIKLMQAESRSPVDCVPLVNIIGLIFQIADD 311 >gi|903319|gb|AAC13867.1| geranylgeranyl pyrophosphate synthetase [Neurospora crassa] gi|28949983|emb|CAD70868.1| farnesyltranstransferase (al-3) [Neurospora crassa] Length = 428 Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 13/178 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IRS +V + +V + + I +H SL+ DD+ DN +RRG P H Sbjct: 141 GKDIRSQMVKAFDAWLDVPSESLEVITKVISMLHTASLLVDDV--EDNSVLRRGFPVAHS 198 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I N + YA + + K +I S+ +L+L G+ + + Sbjct: 199 IFGIPQTINTSNYVYFYALQELQKLKNPKAVSIFSEELLNLHRGQGMDLFWRDTLTCPTE 258 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D++++ M+ KTG L G + A +G+IFQ+ADD Sbjct: 259 DDYLE-----MVSN-KTGGLFRL----GIKLMQAESRSPVDCVPLVNIIGLIFQIADD 306 >gi|300079894|gb|ADJ67472.1| farnesyl pyrophosphate synthase [Artemisia annua] Length = 343 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 20/232 (8%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71 K DT+ +L+ A + + Y + GGK R V + L L+ Sbjct: 12 KVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNIPGGKLNRGLSVVDSYQLLKGGELSDD 71 Query: 72 ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + +G IE + Y L+ DD+ MD + RRG+P + +V I A +G+L Sbjct: 72 EIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLLKVGMIAANDGILLRN 128 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-------- 179 + K + + ++ L + + Q GQM+D+ + E + Sbjct: 129 -HVPRILKKHFRGKPYYEDLVDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLSIHRR 186 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230 I + KT + + A++ +K ++ +G FQ+ DD LDC Sbjct: 187 IVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQDDYLDC 238 >gi|162538561|gb|ABY19312.1| farnesyl diphosphate synthase 1 [Myzus persicae] Length = 394 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 31/217 (14%) Query: 39 LLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 L ++Y + GGKK R +++ + + N + +G +E + Y L+ DD Sbjct: 85 LAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAYQLVLDD 144 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149 + MDN RRG+P + +++++ + +G+L +++I K KD +L Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYYTHILE 198 Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199 L ++ ++ +G Q LD+ +++ E ++ K KT A F M Sbjct: 199 LFFDVTMKTAMG-QCLDMLTANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAM 255 Query: 200 AHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233 + N+ E R +G FQ+ DD LDC D Sbjct: 256 RMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292 >gi|326915522|ref|XP_003204065.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Meleagris gallopavo] Length = 299 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 24/196 (12%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 R+L +Y L L GK++R+ L NV + E +H SL+ DD+ D Sbjct: 10 RILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDIE--D 67 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG P H Y + I N + E + + + ++ +L L Sbjct: 68 NSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHK---- 123 Query: 157 QGMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 GQ LDI +D + E + ++Q KTG L A +M S N K+ L Sbjct: 124 -----GQGLDIYWRDTYTCPTEAEYKAMVLQ--KTGGLFGLAV---GLMQLFS-NYKKDL 172 Query: 211 RCFGENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 173 KPLLNTLGLFFQIRDD 188 >gi|151415019|gb|ABS11699.1| farnesyl diphosphate synthase [Matricaria chamomilla var. recutita] Length = 343 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 28/236 (11%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71 K DT+ +L+ A + + Y + GGK R V + L LT Sbjct: 12 KVYDTLKSELINDPAFEFDDDSRQWVEKMLDYNVPGGKLNRGLSVVDSYQLLKGGELTDD 71 Query: 72 ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + +G IE + Y L+ D+ MD + RRG+P + +V I A +G+L Sbjct: 72 EIFLSSALGWCIEWLQAYFLVLGDI--MDESHTRRGQPC-WFRLPKVGMIAANDGILLRN 128 Query: 128 FEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---- 179 P+ LK++ R + ++ L + + Q GQM+D+ + E + Sbjct: 129 ----HVPRI-LKNHFRGKPYYVDLVDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLS 182 Query: 180 ----IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230 I + KT + + A++ +K ++ +G FQ+ DD LDC Sbjct: 183 VHRRIVQYKTAYYSFYLPVAXALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDC 238 >gi|126438016|ref|YP_001073707.1| polyprenyl synthetase [Mycobacterium sp. JLS] gi|126237816|gb|ABO01217.1| Polyprenyl synthetase [Mycobacterium sp. JLS] Length = 374 Score = 42.0 bits (97), Expect = 0.062, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 28/179 (15%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---------------- 114 ALR A+ + +H ++L+ DD+ MD+ +RRG+P H+++ + Sbjct: 92 AALRAAASFDLLHVFALLQDDV--MDDSPLRRGRPAAHVRFAQWHRDNGLNGSAERFGAS 149 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFID 173 A++ G+ L +A +++ ++ L D L + ++ L GQ D+ ++ Sbjct: 150 AAVLLGDLCLVWAGQMMR--ESGLGDR---ALARAWPRYDAMRTELAVGQFADLVNDAGG 204 Query: 174 ET---QVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 V + + K+G E G +A + L +G +G FQL DDLL Sbjct: 205 RPTLEDVLDVARRKSGNYTVRRPLEIGGALAGCPEATLGLLGRYGAAVGEAFQLRDDLL 263 >gi|71041845|pdb|1WL1|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima H74a Mutant gi|71041846|pdb|1WL1|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima H74a Mutant Length = 299 Score = 42.0 bits (97), Expect = 0.062, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 16/143 (11%) Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDD+ +D RRGK T++ Y + A+ AG+ +L AF + ++ +N +L Sbjct: 80 HDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE----EIGNN---KLRR 130 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + + IG M ++++ + I + + I + K+GAL A + A++ Sbjct: 131 AFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQLPALLEGELG-- 186 Query: 207 KERLRCFGENLGIIFQLADDLLD 229 E L G +G I+Q+ DD++D Sbjct: 187 -EDLYNLGVTIGTIYQMFDDIMD 208 >gi|50292709|ref|XP_448787.1| hypothetical protein [Candida glabrata CBS 138] gi|49528100|emb|CAG61757.1| unnamed protein product [Candida glabrata] Length = 351 Score = 42.0 bits (97), Expect = 0.062, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 29/212 (13%) Query: 41 SAIRYALLGGKKIRSFLVTECASLF----------NVNHLTALRVGAAIECIHCYSLIHD 90 S++ Y GGK R V + ++ + + +G IE + Y L+ D Sbjct: 40 SSLNYNTPGGKLNRGLSVVDTYAILKGYESVDDMKDDEYKKVALLGWCIELLQAYFLVAD 99 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ MD RRG+P + + V I + + A I K +++ +L L Sbjct: 100 DM--MDKSITRRGQPCWY-RVKNVNEIAINDAFMLEA-AIYVLLKKHFRNDSYYVDLLEL 155 Query: 151 THNIGLQGMLGGQMLDI---QDEFIDETQVFMIQK------MKTGALMCFACESGAIMAH 201 H++ Q LG Q+LD+ ++ +D ++ F + K KT A F M Sbjct: 156 FHDVTFQTELG-QLLDLITAPEDHVDLSK-FSLSKHSFIVIFKT-AYYSFYLPVALAMYA 212 Query: 202 ASQNEKERLRCFGE---NLGIIFQLADDLLDC 230 A N+ + L+ + LG FQ+ DD LDC Sbjct: 213 AGVNDSKDLKQAQDVLIPLGEYFQIQDDYLDC 244 >gi|117164789|emb|CAJ88338.1| putative polyprenyl synthetase [Streptomyces ambofaciens ATCC 23877] Length = 352 Score = 42.0 bits (97), Expect = 0.065, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 9/105 (8%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG----GKKIRS-FLVTECASLFNVNH 69 R+D +L + + A H+ D L+ + L G GK++R+ F + + Sbjct: 13 RVDGVLRSYVDEEAGHLVA--VDDALAPVAEQLRGAAGHGKRLRAAFCYWGWRAAGQPDD 70 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 +R AA+E +H +++HDDL +D+ +R G PT H+ + V Sbjct: 71 DALVRAAAAMELVHAAAIVHDDL--IDDSPLRHGLPTAHVALEAV 113 >gi|330961585|gb|EGH61845.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 116 Score = 42.0 bits (97), Expect = 0.067, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T + Sbjct: 43 GGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100 Query: 109 IQYDEVTAIIAGNGL 123 + +++ G+ L Sbjct: 101 ALWGNAPSVLVGDFL 115 >gi|311895558|dbj|BAJ27966.1| putative polyprenyl diphosphate synthase [Kitasatospora setae KM-6054] Length = 368 Score = 42.0 bits (97), Expect = 0.068, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 71/175 (40%), Gaps = 50/175 (28%) Query: 88 IHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEI- 130 +HDDL MD RRG P VH QY A++ G+ LL + E+ Sbjct: 98 VHDDL--MDRSDTRRGLPAVHRRFENLHRAGGWRGDREQYGASAAVLLGDLLLIWCDELF 155 Query: 131 ---------ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMI 180 +SS K D +R+++ML GQ LD+ + D T + Sbjct: 156 QCSGLPTGAVSSAKPVF-DLMRTEVML-------------GQYLDVLEPVAGDSTDADAL 201 Query: 181 QKMKT-------GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + +T + + GA++A A + + L FG LG FQL DDLL Sbjct: 202 DRARTVLHYKSAKYTIERPLQVGALLAGAGPDLVDALGGFGLPLGEAFQLRDDLL 256 >gi|4894899|gb|AAD32648.1| farnesyl diphosphate synthase [Artemisia annua] Length = 343 Score = 42.0 bits (97), Expect = 0.068, Method: Compositional matrix adjust. Identities = 56/235 (23%), Positives = 94/235 (40%), Gaps = 26/235 (11%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71 K DT+ +L+ A + + Y + GGK R V + L L+ Sbjct: 12 KVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVVDSYQLLKGGELSDD 71 Query: 72 ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + +G IE + Y L+ DD+ MD + RRG+P + +V I A +G+L Sbjct: 72 EIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLLKVGMIAANDGILLRN 128 Query: 128 FEIISSPKTQLKDNIRSQ---LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM----- 179 P+ LK + R + + L N G+ GQM+D+ + E + Sbjct: 129 ----HVPRI-LKKHFRGKPYYVDLVDLFNEGVIQTASGQMIDLIPTLVGEKDLSKYSLSI 183 Query: 180 ---IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230 I + KT + + A++ +K ++ +G FQ+ DD LDC Sbjct: 184 HRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQDDYLDC 238 >gi|12848440|dbj|BAB27955.1| unnamed protein product [Mus musculus] gi|13905030|gb|AAH06798.1| Ggps1 protein [Mus musculus] gi|148700811|gb|EDL32758.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Mus musculus] Length = 236 Score = 42.0 bits (97), Expect = 0.069, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL RY L L GK++RS L V + E +H SL+ DD+ D+ Sbjct: 12 LLEPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++QK TG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDTYTCPTEEEYKAMVLQK--TGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 175 PLLDTLGLFFQIRDD 189 >gi|313237864|emb|CBY12994.1| unnamed protein product [Oikopleura dioica] Length = 349 Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 20/206 (9%) Query: 38 RLLSAIRYALLGGKKIRSFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 +L ++ Y L GGK R + ++ A V+ AL +G A+EC+ L+ DD+ Sbjct: 46 QLEKSLEYNLSGGKMSRGMVASQVFLLSAKDSRVSEEDALVLGWAMECLQTCFLVVDDI- 104 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MD+ RRG+ + D ++A N L+ + ++ L D + ++ L Sbjct: 105 -MDSSVTRRGRACWYKNQD--VGLMAINDALSIEMCVYILLRS-LPDYVPVDKLVELFEW 160 Query: 154 IGLQGMLGGQMLDIQDE---------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 + +G Q LD+Q+ F ++T ++ K KT + + ++A Sbjct: 161 ATIITEMG-QTLDMQNSECAHVDLSHFTEDTYSAIV-KYKTSVYSFYLPIASGLVAAGQD 218 Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230 + +L+ +G FQ DD +DC Sbjct: 219 SNCSQLKEITLQMGHYFQAQDDFIDC 244 >gi|325290814|ref|YP_004266995.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324966215|gb|ADY56994.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 313 Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 2/96 (2%) Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 ++KD + + S+ + +G++ +G ++L E I+ Q F + + K+G+L AC Sbjct: 118 ARIKDRSLAIQICSIFNCMGIRASVGQYQEVLYGISEQIELDQYFELIRQKSGSLTAAAC 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + G +M A ++ +L FG N GI+ Q+++DL D Sbjct: 178 KIGGVMGRAPESIVLKLEEFGANYGIMNQISNDLND 213 >gi|108802037|ref|YP_642234.1| polyprenyl synthetase [Mycobacterium sp. MCS] gi|119871189|ref|YP_941141.1| polyprenyl synthetase [Mycobacterium sp. KMS] gi|108772456|gb|ABG11178.1| Polyprenyl synthetase [Mycobacterium sp. MCS] gi|119697278|gb|ABL94351.1| Polyprenyl synthetase [Mycobacterium sp. KMS] Length = 374 Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 2/41 (4%) Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111 ALR A+ + +H ++L+ DD+ MD+ +RRG+P H+++ Sbjct: 92 AALRAAASFDLLHVFALLQDDV--MDDSPLRRGRPAAHVRF 130 >gi|15236002|ref|NP_193452.1| FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase [Arabidopsis thaliana] gi|13431525|sp|Q43315|FPPS2_ARATH RecName: Full=Farnesyl pyrophosphate synthase 2; Short=FPP synthase 2; Short=FPS 2; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2; AltName: Full=Dimethylallyltranstransferase 2; AltName: Full=Farnesyl diphosphate synthase 2; AltName: Full=Geranyltranstransferase 2 gi|1146161|gb|AAB07247.1| farnesyl diphosphate synthase [Arabidopsis thaliana] gi|1146163|gb|AAB07248.1| farnesyl diphosphate synthase [Arabidopsis thaliana] gi|2245078|emb|CAB10500.1| dl4630c [Arabidopsis thaliana] gi|7268470|emb|CAB80990.1| AT4g17190 [Arabidopsis thaliana] gi|18176350|gb|AAL60028.1| putative farnesyl-pyrophosphate synthetase FPS2 [Arabidopsis thaliana] gi|21436457|gb|AAM51429.1| putative farnesyl-pyrophosphate synthetase FPS2 [Arabidopsis thaliana] gi|332658460|gb|AEE83860.1| farnesyl diphosphate synthase 2 [Arabidopsis thaliana] Length = 342 Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 32/240 (13%) Query: 16 IDTILDDLLLQTAS----HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-- 69 + ++L LLQ S H Q +R+L Y + GGK R V + L Sbjct: 11 VYSVLKSDLLQDPSFEFTHESRQWLERMLD---YNVRGGKLNRGLSVVDSYKLLKQGQDL 67 Query: 70 -----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + +G IE + Y L+ DD+ MDN RRG+P + +V I +G+L Sbjct: 68 TEKETFLSCALGWCIEWLQAYFLVLDDI--MDNSVTRRGQP-CWFRKPKVGMIAINDGIL 124 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQ- 181 I K ++ ++ L + + Q G QM+D+ F E + + +Q Sbjct: 125 LRN-HIHRILKKHFREMPYYVDLVDLFNEVEFQTACG-QMIDLITTFDGEKDLSKYSLQI 182 Query: 182 -----KMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT + AC +MA + ++ ++GI FQ+ DD LDC D Sbjct: 183 HRRIVEYKTAYYSFYLPVAC--ALLMAGENLENHTDVKTVLVDMGIYFQVQDDYLDCFAD 240 >gi|160893233|ref|ZP_02074021.1| hypothetical protein CLOL250_00779 [Clostridium sp. L2-50] gi|156865316|gb|EDO58747.1| hypothetical protein CLOL250_00779 [Clostridium sp. L2-50] Length = 127 Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 36/54 (66%) Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 Q+ + + KTGAL+ + GA++A A+++E +++ ++G+ FQ+ DDLLD Sbjct: 5 QLHFVYENKTGALIEASMMIGAVLAGATEDELKQVEMIASDIGLAFQIQDDLLD 58 >gi|284991729|ref|YP_003410283.1| polyprenyl synthetase [Geodermatophilus obscurus DSM 43160] gi|284064974|gb|ADB75912.1| Polyprenyl synthetase [Geodermatophilus obscurus DSM 43160] Length = 375 Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 26/169 (15%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGL 123 E +H +L+HDD+ MD RRG+P H+ + AI+ G+ Sbjct: 102 EFVHASALVHDDV--MDGALTRRGRPATHVGFAARHGDGELAGDGDTFGIGAAILVGDLA 159 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMI 180 L ++ E++ R++ + + GQ LD+ + Sbjct: 160 LVWSDELLRRSGISTAALSRARTVWDTMRTE----VTAGQYLDLLRAAGGLPGAQGALTV 215 Query: 181 QKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + K+ G + + GA +A A E G LG FQL DD+L Sbjct: 216 ARYKSAGYTVQRPLQLGAAIAGAGPRAAEVYTAIGLPLGEAFQLRDDVL 264 >gi|313222092|emb|CBY39100.1| unnamed protein product [Oikopleura dioica] Length = 349 Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 20/206 (9%) Query: 38 RLLSAIRYALLGGKKIRSFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 +L ++ Y L GGK R + ++ A V+ AL +G A+EC+ L+ DD+ Sbjct: 46 QLEKSLEYNLSGGKMSRGMVASQVFLLSAKDSRVSEEDALVLGWAMECLQTCFLVVDDI- 104 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 MD+ RRG+ + D ++A N L+ + ++ L D + ++ L Sbjct: 105 -MDSSVTRRGRACWYKNQD--VGLMAINDALSIEMCVYILLRS-LPDYVPVDKLVELFEW 160 Query: 154 IGLQGMLGGQMLDIQDE---------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 + +G Q LD+Q+ F ++T ++ K KT + + ++A Sbjct: 161 ATIITEMG-QTLDMQNSECAHVDLNHFTEDTYSAIV-KYKTSVYSFYLPIASGLVAAGQD 218 Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230 + +L+ +G FQ DD +DC Sbjct: 219 SNCSQLKEITLQMGHYFQAQDDFIDC 244 >gi|285013665|gb|ADC32809.1| farnesyl pyrophosphate synthase [Medicago sativa] Length = 342 Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 28/215 (13%) Query: 34 QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86 Q DR+L Y + GGK R L+ E +L + A +G IE + Y Sbjct: 33 QWVDRMLD---YNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFQASALGWCIEWLQAYF 89 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+ DD+ MDN + RRG+P + +V I A +G+L I + K Sbjct: 90 LVLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVLLRN-HIPRILRKHFKGKPYYVE 145 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF---ACES 195 +L L + + Q GQM+D+ E + I + KT + AC Sbjct: 146 LLDLFNEVEFQTA-AGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVAC-- 202 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +MA + ++ +G FQ+ DD LDC Sbjct: 203 ALLMAGEDLDNHVDVKNILVEMGTYFQVQDDYLDC 237 >gi|299538243|ref|ZP_07051528.1| transcriptional regulator of comG and srfA [Lysinibacillus fusiformis ZC1] gi|298726445|gb|EFI67035.1| transcriptional regulator of comG and srfA [Lysinibacillus fusiformis ZC1] Length = 300 Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 20/165 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +V AAIE + I DDL D+ Y P + + I+A + +FE Sbjct: 65 KVAAAIELLILSFDIIDDLQDKDSDYSWNKTPELSLNVALAMLIMASKTIDETSFE---- 120 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + + L + L+ + GQ LD+ + DE + +K+G+L C Sbjct: 121 ---------HKRAAIKLVNEYALKS-INGQQLDLLNSCRDEDSYVKMITLKSGSLTAMGC 170 Query: 194 ESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 G ++A SQ +E +G+ +GII Q+ +D+ + PK Sbjct: 171 LVGEVLAKGVISQEVEE----YGKYIGIIQQIKNDIQSLKVWGPK 211 >gi|297800392|ref|XP_002868080.1| hypothetical protein ARALYDRAFT_493157 [Arabidopsis lyrata subsp. lyrata] gi|297313916|gb|EFH44339.1| hypothetical protein ARALYDRAFT_493157 [Arabidopsis lyrata subsp. lyrata] Length = 342 Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 32/240 (13%) Query: 16 IDTILDDLLLQTAS----HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-- 69 + +IL LLQ S H Q +R+L Y + GGK R V + L Sbjct: 11 VYSILKSDLLQDPSFEFTHESRQWLERMLD---YNVRGGKLNRGLSVVDSYKLLKQGQDL 67 Query: 70 -----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + +G IE + Y L+ DD+ MDN RRG+P + +V I +G+L Sbjct: 68 TEKETFLSCALGWCIEWLQAYFLVLDDI--MDNSVTRRGQP-CWFRKPKVGMIAINDGIL 124 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQ- 181 I K ++ ++ L + + Q G QM+D+ F E + + +Q Sbjct: 125 LRN-HIHRILKKHFREMPYYVDLVDLFNEVEFQTACG-QMIDLITTFDGEKDLSKYSLQI 182 Query: 182 -----KMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT + AC +MA + ++ ++GI FQ+ DD LDC D Sbjct: 183 HRRIVQYKTAYYSFYLPVAC--ALLMAGENLENHTDVKNVLVDMGIYFQVQDDYLDCFAD 240 >gi|225709438|gb|ACO10565.1| Geranylgeranyl pyrophosphate synthetase [Caligus rogercresseyi] Length = 303 Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 16/192 (8%) Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL Y L GK IR L+T S + T ++ I+ +H SL+ DD+ D+ Sbjct: 18 LLEPFTYLLQAKGKNIRKKLLTAFNSWLKIPSDTLNKISDIIQMLHNASLLLDDIE--DS 75 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 G +RRG P + E + I N ++ A E + + S+ +L L G++ Sbjct: 76 GILRRGIPVSRKIFGEPSTINCANYVMFIALEKVIELNHPSAAKVFSEQLLELHRGQGME 135 Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + +D + E + + KTG L +M S E ++ E Sbjct: 136 -------IYWRDNYQCPTEKEYRQMCIRKTGGLFALGVR---LMQLFSSEEGNYIQLV-E 184 Query: 216 NLGIIFQLADDL 227 LG+ FQ+ DD Sbjct: 185 LLGLYFQIRDDF 196 >gi|254821741|ref|ZP_05226742.1| IdsA2_2 [Mycobacterium intracellulare ATCC 13950] Length = 359 Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 28/172 (16%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGN 121 + E +H ++L+ DD+ MD +RRG+P+ H Q + E AI+ G+ Sbjct: 84 SFELVHAFALLQDDV--MDGSDVRRGRPSAHRQFGRWHRERGLPGASRRFGESAAILLGD 141 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQ---V 177 L +A +++ + +L L+ ++ L GQ D+ ++ V Sbjct: 142 LCLIWAEQMLRDSGIDPR-----RLQLAWPRYDAMRTELAVGQFADLINDARQAPGLEFV 196 Query: 178 FMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + K+G E GA MA + +L +G +G FQL DD+L Sbjct: 197 LDVARRKSGNYTVRRPLEIGAAMAGCGAHTLCQLGRYGRAVGEAFQLRDDVL 248 >gi|207347806|gb|EDZ73868.1| YBR003Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 256 Score = 41.6 bits (96), Expect = 0.080, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 R+ +E IH SL+HDD+ +D+ RRG+P+ + + A++AG+ LL A IS Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNTAFTNKMAVLAGDFLLGRATVSIS 233 >gi|83768519|dbj|BAE58656.1| unnamed protein product [Aspergillus oryzae] Length = 312 Score = 41.6 bits (96), Expect = 0.080, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 21/195 (10%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 D LLS+ GGK IR L+ + A + + +H SL+ DD+ D Sbjct: 31 DYLLSS------GGKNIRHKLMLAFNEWLQIPPEKAEIISEIVNLLHTASLLIDDI--QD 82 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKP H + I + N A + +SS + +++ + +L+L G+ Sbjct: 83 SSKLRRGKPVAHSIFGVAQTINSANYAYFLAQQKLSSLHSTRANDVFVEELLNLHRGQGM 142 Query: 157 QGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 L +D E Q + KTG L A + + N+ Sbjct: 143 D-------LHWRDTLTCPTEEQYIGMVLDKTGGLFRLAVK----LMQLESNQTCDCIPLT 191 Query: 215 ENLGIIFQLADDLLD 229 LG IFQ+ DD+L+ Sbjct: 192 NTLGTIFQIRDDILN 206 >gi|255587638|ref|XP_002534338.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis] gi|223525465|gb|EEF28044.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis] Length = 333 Score = 41.6 bits (96), Expect = 0.081, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 35/242 (14%) Query: 18 TILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNH------- 69 +IL LL+ + T + ++ + Y + GGK R V + L Sbjct: 13 SILKKQLLEDPAFEWTPDSREWVNRMLDYNVPGGKLNRGLSVIDSYQLLKEGQELTEEEI 72 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A +G IE + Y L+ DD+ MD + RRG+P + +V I A +G+L Sbjct: 73 FLASALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPC-WFRVPKVGMIAANDGVLLRN-- 127 Query: 130 IISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM------ 179 P+ LK++ R + +L L + + Q GQM+D+ E + Sbjct: 128 --HIPRI-LKNHFRGKAYYVDLLDLFNEVEFQTA-SGQMIDLITTLEGEKDLSKYTLSLH 183 Query: 180 --IQKMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 I + KT + AC +MA + ++ ++ ++GI FQ+ DD LDC D Sbjct: 184 RRIVQYKTAYYSFYLPVAC--ALLMAGENLDDHIDVKNILVDMGIYFQVQDDYLDCFGD- 240 Query: 235 PK 236 PK Sbjct: 241 PK 242 >gi|156847950|ref|XP_001646858.1| hypothetical protein Kpol_2002p71 [Vanderwaltozyma polyspora DSM 70294] gi|156117539|gb|EDO19000.1| hypothetical protein Kpol_2002p71 [Vanderwaltozyma polyspora DSM 70294] Length = 352 Score = 41.6 bits (96), Expect = 0.081, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 27/172 (15%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +G +E + Y L+ DD+ MD RRG+P + D G + AF + ++ Sbjct: 85 LGWCVELLQAYFLVADDM--MDKSITRRGQPCWYRVED------VGEIAINDAFMLEAAI 136 Query: 135 KTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQK----- 182 LK RS+ ++ L H++ Q +G Q+LD+ +E +D ++ F ++K Sbjct: 137 YELLKKYFRSESYYIDLIELFHDVTFQTEMG-QLLDLITAPEESVDLSK-FSLEKHSFIV 194 Query: 183 -MKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDC 230 KT A F M A ++ + L+ + LG FQ+ DD LDC Sbjct: 195 IFKT-AYYSFYLPVALAMYVAGNHDPKDLKQAQDVLIPLGEYFQIQDDYLDC 245 >gi|326435055|gb|EGD80625.1| quemao protein [Salpingoeca sp. ATCC 50818] Length = 328 Score = 41.6 bits (96), Expect = 0.083, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 23/185 (12%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + GK IRS L+ V ++ + + +H SL+ DD+ DN +RRG P Sbjct: 38 IPGKDIRSQLIQAFNLWLKVPDDKLSKIKSVTKILHNASLLIDDI--EDNSKLRRGIPVA 95 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H Y I N + A I++ + + +L L GQ +DI Sbjct: 96 HSVYGVAQTINCANYMYFKAMAEIAALGHPDAAQVFTDQLLELHR---------GQGMDI 146 Query: 168 --QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 +D F+ DE + +++ KTG L A + + + S++ L F G+ F Sbjct: 147 YWRDAFVCPTEDEYRTMVLR--KTGGLFQLAVQIMQLFSDDSRDYTPLLNAF----GLYF 200 Query: 222 QLADD 226 Q+ DD Sbjct: 201 QIRDD 205 >gi|323306067|gb|EGA59801.1| Coq1p [Saccharomyces cerevisiae FostersB] Length = 285 Score = 41.6 bits (96), Expect = 0.083, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 R+ +E IH SL+HDD+ +D+ RRG+P+ + + A++AG+ LL A IS Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNXAFTNKMAVLAGDFLLGRATVSIS 233 >gi|224047852|ref|XP_002194762.1| PREDICTED: similar to geranylgeranyl pyrophosphate synthetase [Taeniopygia guttata] Length = 299 Score = 41.6 bits (96), Expect = 0.084, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 24/196 (12%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 R+L +Y L L GK++R+ L NV + E +H SL+ DD+ D Sbjct: 10 RILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIDVTEMLHNASLLVDDIE--D 67 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 N +RRG P H Y + I N + E + + + ++ +L L Sbjct: 68 NSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHK---- 123 Query: 157 QGMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 GQ LDI +D + E + ++Q KTG L A +M S N K+ L Sbjct: 124 -----GQGLDIYWRDTYTCPTEAEYKAMVLQ--KTGGLFGLAV---GLMQLFS-NYKKDL 172 Query: 211 RCFGENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 173 KPLLNTLGLFFQIRDD 188 >gi|403318|emb|CAA81272.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae] gi|1582566|prf||2118405G hexaprenyl pyrophosphate synthetase Length = 285 Score = 41.6 bits (96), Expect = 0.084, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 R+ +E IH SL+HDD+ +D+ RRG+P+ + + A++AG+ LL A IS Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRATVSIS 233 >gi|304389368|ref|ZP_07371333.1| possible dimethylallyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656626|ref|ZP_07909513.1| polyprenyl synthetase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304327486|gb|EFL94719.1| possible dimethylallyltransferase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492581|gb|EFU82185.1| polyprenyl synthetase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 361 Score = 41.6 bits (96), Expect = 0.085, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 30/177 (16%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----------QYDEVTAIIAGN 121 L +GA++E +L+HDD+ +DN RRG P I ++ + AI+ G+ Sbjct: 79 LDLGASLELFQTSALVHDDI--IDNAIKRRGLPAAQIAFMTSFPMGGPRFGDSAAILWGD 136 Query: 122 GLLTYAFEIISSPKTQLK-DNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173 L A S + L +N S +++ + GQ LD+ E + Sbjct: 137 LLYAAANSYFSQAISTLSVENAHRASNFFVTMQAEVAY-----GQFLDLSAETRELSPDM 191 Query: 174 ----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E + +I+ + GA + AS + E+L F LG+ +QL DD Sbjct: 192 PPSREAAMEIIKHKTARYSVVIPLLLGAALRGASDSLIEQLEGFATPLGVAYQLRDD 248 >gi|238490280|ref|XP_002376377.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus flavus NRRL3357] gi|317145287|ref|XP_001820658.2| farnesyltranstransferase [Aspergillus oryzae RIB40] gi|220696790|gb|EED53131.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus flavus NRRL3357] Length = 320 Score = 41.6 bits (96), Expect = 0.085, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 21/195 (10%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 D LLS+ GGK IR L+ + A + + +H SL+ DD+ D Sbjct: 39 DYLLSS------GGKNIRHKLMLAFNEWLQIPPEKAEIISEIVNLLHTASLLIDDI--QD 90 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 + +RRGKP H + I + N A + +SS + +++ + +L+L G+ Sbjct: 91 SSKLRRGKPVAHSIFGVAQTINSANYAYFLAQQKLSSLHSTRANDVFVEELLNLHRGQGM 150 Query: 157 QGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 L +D E Q + KTG L A + + N+ Sbjct: 151 D-------LHWRDTLTCPTEEQYIGMVLDKTGGLFRLAVK----LMQLESNQTCDCIPLT 199 Query: 215 ENLGIIFQLADDLLD 229 LG IFQ+ DD+L+ Sbjct: 200 NTLGTIFQIRDDILN 214 >gi|119331238|ref|NP_001073269.1| geranylgeranyl pyrophosphate synthase [Bos taurus] gi|143811398|sp|P56966|GGPPS_BOVIN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|111305299|gb|AAI20314.1| Geranylgeranyl diphosphate synthase 1 [Bos taurus] gi|296472248|gb|DAA14363.1| geranylgeranyl pyrophosphate synthetase [Bos taurus] Length = 300 Score = 41.6 bits (96), Expect = 0.088, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++Q KTG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 175 PLLDTLGLFFQIRDD 189 >gi|241955823|ref|XP_002420632.1| geranylgeranyl diphosphate synthase, putative; geranylgeranyl pyrophosphate synthetase, putative; [includes: dimethylallyltranstransferase (ec 2.5.1.1) geranyltranstransferase (ec 2.5.1.10); farnesyltranstransferas (ec 2.5.1.29)] [Candida dubliniensis CD36] gi|223643974|emb|CAX41714.1| geranylgeranyl diphosphate synthase, putative [Candida dubliniensis CD36] Length = 332 Score = 41.6 bits (96), Expect = 0.092, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 21/168 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF---EI 130 ++ I H SL+ DD+ D+ RRG P H++Y + + GN + A + Sbjct: 63 KISEIISVFHNSSLLIDDIE--DDSKYRRGVPVAHVKYGIPSTLNCGNLMYFVALQQAQQ 120 Query: 131 ISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQ--------DEFIDETQVFMIQ 181 +S P ++ + SQ+++ L + GQ LDI ++ D + + Sbjct: 121 LSGPHGSMEIKFKSSQILID-----ELLNLHRGQGLDIYWRDYLKKLEKLPDVEEYLEMI 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 K KTG L A + ++ + +N ++L +GI++Q+ DD L+ Sbjct: 176 KDKTGGLFRLAIKLLSLYSDIKEN--DQLISLANLMGILYQVRDDYLN 221 >gi|316954848|gb|EFV46383.1| decaprenyl-diphosphate synthase subunit 1 [Trichinella spiralis] Length = 146 Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%) Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD-CEED 233 KTG+L + ++ A++A+ S+ + + FG N G++FQL DDLLD C D Sbjct: 65 KTGSLFSNSLKAAAVLANCSELCVKNVYQFGRNFGLMFQLVDDLLDFCSVD 115 >gi|281346909|gb|EFB22493.1| hypothetical protein PANDA_021734 [Ailuropoda melanoleuca] Length = 284 Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 23/188 (12%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y+L+ GK++R+ L V + E +H SL+ DD+ DN +RRG Sbjct: 3 YSLISGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSKLRRGF 60 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 P H Y + I + N + E + + + + +L L GQ Sbjct: 61 PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQ---------GQG 111 Query: 165 LDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 LDI +D + +E + ++Q KTG L A +M S + KE L+ LG Sbjct: 112 LDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLKPLLNTLG 165 Query: 219 IIFQLADD 226 + FQ+ DD Sbjct: 166 LFFQIRDD 173 >gi|329941631|ref|ZP_08290896.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045] gi|329299348|gb|EGG43248.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045] Length = 337 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 43 IRYALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 +R A GK++R+ F + + LR A++E +H + +HDDL +D+ +R Sbjct: 30 LRRAAAHGKRLRAAFCYWGWRAAGQPDSEALLRAAASLELVHAAATVHDDL--IDDSPLR 87 Query: 102 RGKPTVHI 109 G PTVH+ Sbjct: 88 HGLPTVHV 95 >gi|6806915|ref|NP_034412.1| geranylgeranyl pyrophosphate synthase [Mus musculus] gi|6831551|sp|Q9WTN0|GGPPS_MOUSE RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|4586868|dbj|BAA76512.1| GGPP synthase [Mus musculus] gi|47124116|gb|AAH69913.1| Geranylgeranyl diphosphate synthase 1 [Mus musculus] gi|74215597|dbj|BAE21415.1| unnamed protein product [Mus musculus] Length = 300 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL RY L L GK++RS L V + E +H SL+ DD+ D+ Sbjct: 12 LLEPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++QK TG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDTYTCPTEEEYKAMVLQK--TGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 175 PLLDTLGLFFQIRDD 189 >gi|67516745|ref|XP_658258.1| hypothetical protein AN0654.2 [Aspergillus nidulans FGSC A4] gi|40746274|gb|EAA65430.1| hypothetical protein AN0654.2 [Aspergillus nidulans FGSC A4] gi|259489078|tpe|CBF89051.1| TPA: Geranylgeranyl diphosphate synthase [Source:UniProtKB/TrEMBL;Acc:Q874I1] [Aspergillus nidulans FGSC A4] Length = 396 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 17/183 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R ++ V + + + +H SL+ DD+ DN +RRG P H Sbjct: 95 GKDLRRQMINAFNVWLKVPSESLAIITKVVAMLHTASLLIDDVE--DNSLLRRGIPVAHS 152 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 Y I + N + A + + K+ +I Q +L+L G+ + + Sbjct: 153 IYGTAQTINSANYVYFLALQEVQKLKSPAAIDIYVQELLNLHRGQGMDLFWRDTLTCPSE 212 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG--ENLGIIFQLADD 226 DE+++ M+ KTG L A + +M S K+ C LG++FQ+ DD Sbjct: 213 DEYLE-----MVGN-KTGGLFRLAVK---LMQAESSTGKD---CVALVNVLGLVFQICDD 260 Query: 227 LLD 229 L+ Sbjct: 261 YLN 263 >gi|119483962|ref|XP_001261884.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Neosartorya fischeri NRRL 181] gi|119410040|gb|EAW19987.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Neosartorya fischeri NRRL 181] Length = 357 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 19/192 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR L++ + + + +H SL+ DD+ D+ +RRG P H Sbjct: 83 GKDIRGKLISAFNQWLQIPEDKLDVIKRVVGLLHSASLLIDDI--QDSSKLRRGFPVAHS 140 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + I + N +A + +LK + + M+ T + + GQ LD+ Sbjct: 141 IFGIAQTINSANFAYFWA-------QQELKKLGKPEAMVIFTEE--MLRLHRGQGLDLYW 191 Query: 168 QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D E + + KTG L A + +M SQN K+ + + LGIIFQ+ D Sbjct: 192 RDSLTCPTEEEYLEMVANKTGGLFRLAIK---LMQMESQNTKDCVPLV-DLLGIIFQIRD 247 Query: 226 DLLDCEEDLPKK 237 D + + DL K Sbjct: 248 DYQNLQSDLYAK 259 >gi|4324960|gb|AAD17204.1| farnesyl diphosphate synthase [Artemisia annua] Length = 343 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 28/236 (11%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71 K DT+ +L+ A + + Y + GGK R V + L L+ Sbjct: 12 KVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVVDSYQLLKGGELSDD 71 Query: 72 ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + +G IE + Y L+ DD+ MD + RRG+P + +V I A +G+L Sbjct: 72 EIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLLKVGMIAANDGILLRN 128 Query: 128 FEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---- 179 P+ LK + R + ++ L + + Q GQM+D+ + E + Sbjct: 129 ----HVPRI-LKKHFRGKPYYVDLVDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLS 182 Query: 180 ----IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230 I + KT + + A++ +K ++ +G FQ+ DD LDC Sbjct: 183 IHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQDDYLDC 238 >gi|89675427|gb|ABD77586.1| farnesyl diphosphate synthase [Vitis vinifera] Length = 176 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 14/171 (8%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A +G IE + Y L+ DD+ MDN + RRG+P + +V I A +G++ +I Sbjct: 11 ACVLGWCIEWLQAYFLVLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVILRN-QIP 66 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKM 183 K K +L L + + Q GQM+D+ E + I + Sbjct: 67 RILKNHFKGKPYYVDLLDLFNEVEFQTA-SGQMIDLITTIEGEKDLSKYSLPLHRRIVQY 125 Query: 184 KTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT + + A+ MA + + ++ +GI FQ+ DD LDC D Sbjct: 126 KTAYYSFYLPVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGD 176 >gi|255945615|ref|XP_002563575.1| Pc20g10860 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588310|emb|CAP86415.1| Pc20g10860 [Penicillium chrysogenum Wisconsin 54-1255] Length = 732 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 20/212 (9%) Query: 32 QTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 QTQ +L+ Y L K +R L+ S + V + L + A+ +H SL+ D Sbjct: 382 QTQQQRPVLNPYTYINSLPSKNVRQTLIAALNSWYKVPVKSLLIIEGAVNFLHNSSLLLD 441 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ D ++RRG+P H + I L+ A +I + S +S+ Sbjct: 442 DI--QDGSFLRRGRPVAHQIFGVGQTINTATYLMNEALYLI---------QMLSPSAVSV 490 Query: 151 THNIG-LQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 I ++ + GQ D+ + Q + KTG L F S + + A++N Sbjct: 491 YTEIDEMRNLQLGQGRDLYWSYHTHVPTPAQYISMVDGKTGGL--FRLISRLMRSEATKN 548 Query: 206 EKERLRCFGENLGIIFQLADDLLDCE-EDLPK 236 + F LG FQ+ DD + + ED K Sbjct: 549 SDLDISQFATLLGRHFQIRDDYQNLQSEDYTK 580 >gi|67623923|ref|XP_668244.1| hypothetical protein [Cryptosporidium hominis TU502] gi|54659431|gb|EAL38008.1| hypothetical protein Chro.70416 [Cryptosporidium hominis] Length = 456 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 26/171 (15%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 +I+ IH SL+HDD+ +DN IRRGK + + I+ G+ L + + IS Sbjct: 187 SIQLIHSASLLHDDI--LDNSEIRRGKKAPYKIFGNKRTILLGDYLFSKSCLNIS----- 239 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLG-----GQMLDIQDEFIDET--------QVFMIQKMK 184 L +NI + +S+ ++G G +++ + D + + K Sbjct: 240 LIENINAMKCISIIAENLVKGEFSQLNGLGSLIESLNNSKDRKGLVENYFEKYLLKSYYK 299 Query: 185 TGALMCF---ACESGAIMAHASQNEKERL---RCFGENLGIIFQLADDLLD 229 T +L F AC A+ ++ E + G N G+ FQL DD+LD Sbjct: 300 TASLFSFGGIACSELLKKAYGNKLRMEMIIYSYYMGLNFGLAFQLMDDILD 350 >gi|325129055|gb|EGC51905.1| geranyltranstransferase [Neisseria meningitidis N1568] Length = 143 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Query: 159 MLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGE 215 M GGQ +D+ + Q + Q +KTGAL+ A GA+ + S++ L + Sbjct: 1 MAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDAYAA 60 Query: 216 NLGIIFQLADDLLDCEED 233 LG+ FQ+ DD+LDCE D Sbjct: 61 KLGLAFQVIDDVLDCEAD 78 >gi|327292126|ref|XP_003230771.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like, partial [Anolis carolinensis] Length = 137 Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 11/77 (14%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE---------I 130 E IH SL+HDD+ +D+ RRGK TV+ + E A++AG+ +L A + I Sbjct: 30 EMIHTASLVHDDV--IDDANSRRGKLTVNHVWGERKAVLAGDFILAVASQTLARIGNTTI 87 Query: 131 ISSPKTQLKDNIRSQLM 147 +S ++D +R + + Sbjct: 88 VSVLTRAIEDLVRGEFL 104 >gi|291402146|ref|XP_002717392.1| PREDICTED: geranylgeranyl diphosphate synthase 1 [Oryctolagus cuniculus] Length = 300 Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++Q KTG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 175 PLLDTLGLFFQIRDD 189 >gi|260905289|ref|ZP_05913611.1| Polyprenyl synthetase [Brevibacterium linens BL2] Length = 401 Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 38/211 (18%) Query: 49 GGKKIRSFLVTECASLFNVN--HLTALRVGAA-----IECIHCYSLIHDDLPSMDNGYIR 101 GGK IR L+ L + + +AL G A +E +H +LIHDD+ +D+ R Sbjct: 75 GGKMIRPVLLWWGFQLASGDDSSRSALNGGVAEAAGSLELLHAAALIHDDV--IDHSDTR 132 Query: 102 RGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 RGKP +H Q++ AI+ G+ L + E+ ++ L ++ Sbjct: 133 RGKPALHRQFESRHSERRFQGGAEPFGVAAAIVIGDICLALSEELFEKSQSVLGITPSAR 192 Query: 146 -LMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV----FMIQKMKTGALMCFACESGAI 198 L +L ++ + GQ LD+ E + D+ ++ + + K+ Sbjct: 193 DLRATLRRDV-----MVGQYLDVLAEVVPLDDARIGERAWEVLSFKSAKYSVEQPLLLGA 247 Query: 199 MAHASQNEK-ERLRCFGENLGIIFQLADDLL 228 + E+ + FG LG FQL DD+L Sbjct: 248 ALGGADEEQLAEISRFGLPLGQAFQLRDDVL 278 >gi|13383245|dbj|BAB39473.1| putative GGPP synthase 2 [Metaplexis japonica] Length = 128 Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 12/129 (9%) Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +RRGKPT H Y E A++AG+ LL +AFE I++ K L N +L+ + + +G Sbjct: 4 LRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIVTCHKRGLILNNLLELLKNWLSVLVQKG 63 Query: 159 MLGGQMLD-------IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 +L G++L + D I + + Q++ + GAI+ A+ + +LR Sbjct: 64 LLQGRLLIFAPKESLMSDWNILSSYICTRQQLYWRGSVVL----GAILGGANDVQISKLR 119 Query: 212 CFGENLGII 220 F +G++ Sbjct: 120 KFARCIGLL 128 >gi|164661846|ref|XP_001732045.1| hypothetical protein MGL_0638 [Malassezia globosa CBS 7966] gi|159105947|gb|EDP44831.1| hypothetical protein MGL_0638 [Malassezia globosa CBS 7966] Length = 361 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 25/192 (13%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 G+K R +E ++ A +G +E + Y L+ DD+ MD RRG P + Sbjct: 75 GQKTRELTESE--------YVQAAVLGWCVELLQAYFLVADDM--MDASITRRGHPCWY- 123 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + D V I + + A I KT K +L L H++ Q LG Q++D+ Sbjct: 124 RVDGVGNIAINDAFMLEA-AIYHLLKTHFKSESYYGHLLELFHDVTFQTELG-QLIDLIT 181 Query: 168 -QDEFIDETQVFMIQKMK-----TGALMCFACESGAIMAHASQNEKERLRCFGE---NLG 218 ++ +D ++ F +K + A F M N++ + + LG Sbjct: 182 APEDVVDLSK-FSPEKHRLIVVYKTAFYSFYLPVALAMRMCHVNDEAAFKHAQDILIPLG 240 Query: 219 IIFQLADDLLDC 230 FQ+ DD LDC Sbjct: 241 EYFQIQDDYLDC 252 >gi|221119260|ref|XP_002166810.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase, subunit 1 [Hydra magnipapillata] Length = 186 Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 31/46 (67%) Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +LM +C+S A++A+ S ++ +G+NLG+ FQL DD LD Sbjct: 36 KTASLMANSCKSVALLANCSSIVQDMAFEYGKNLGMAFQLVDDALD 81 >gi|10119869|dbj|BAB13491.1| ComQ [Bacillus subtilis] gi|291485620|dbj|BAI86695.1| quorum-sensing protein [Bacillus subtilis subsp. natto BEST195] Length = 287 Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + + IE + + I DD+ DN ++ D A A L T + ++I S Sbjct: 52 LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 K +LSLT LQ L GQ +D+ E++ + K+K+G+L+ Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 G +A N E + + LGI+ Q+A+D Sbjct: 158 LGVYLATGEYN--ETVEEYSRYLGIVEQIAND 187 >gi|326516466|dbj|BAJ92388.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 408 Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 35/234 (14%) Query: 21 DDLLLQTASHMQTQHNDRLLSA--IRYALLGGKKIRSF-------LVTECASLFNVNHLT 71 D+LL A + R A + Y + GGK R L+ E + + + Sbjct: 81 DELLNDRAFNFDFTDETRQWVAKMLDYNVPGGKLNRGLSVIDSYMLLREGTEVDDEDFYL 140 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK------PTVHIQYDEVTAIIAGNGLLT 125 A +G IE + +L+ DD+ DN Y RR PTV + +AI G L Sbjct: 141 ACVLGWCIEWLQASALVLDDI--TDNAYTRRDNLCWYKLPTVGL-----SAINDGVLLKC 193 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-------QDEFIDETQVF 178 + II K K+ ++ L + IGLQ +G QMLD+ +D Q + Sbjct: 194 HVQAII---KRYFKEKFYFMELMELWNEIGLQTAMG-QMLDLITTHTGAKDLARYRIQGY 249 Query: 179 M-IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDC 230 I K KT + + A++ + ++ ++ L+ +G+ FQ+ DD LDC Sbjct: 250 RRIVKYKTSYYSFYPPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDC 303 >gi|116197531|ref|XP_001224577.1| hypothetical protein CHGG_06921 [Chaetomium globosum CBS 148.51] gi|88178200|gb|EAQ85668.1| hypothetical protein CHGG_06921 [Chaetomium globosum CBS 148.51] Length = 715 Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 30/209 (14%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQ--------HNDRLLSAIRYA-LLGGK 51 +NGG+ S+ N I +++ SH + + D L + RY L GK Sbjct: 379 INGGVASRTATNG----IITTGIVINDDSHQEMEVVQDVPSLGTDVLEAPSRYIDSLPGK 434 Query: 52 KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111 IR + + V A V A+ +H SL+ DD+ D+ +RRGKP H+ + Sbjct: 435 GIRHKAIDALNVWYRVPPQQAAIVSKAVHLLHGASLMLDDIE--DSSRLRRGKPAAHLVF 492 Query: 112 DEVTAI-IAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNIGLQ------GMLGG- 162 + I AG L E+ +S +L+D Q L+ T N+ M+ G Sbjct: 493 GTMQTINSAGFRFLNALEELTNSKLEELQDLYVGQSYDLAWTCNLSCPTEEEYLAMVDGS 552 Query: 163 ------QMLDIQDEFIDETQVFMIQKMKT 185 +MLD Q + + V +I + T Sbjct: 553 LFRMLARMLDAQSDSPTKPDVVLITRFMT 581 >gi|14488053|gb|AAK63847.1|AF384040_1 farnesyl diphosphate synthase [Mentha x piperita] Length = 349 Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 36/219 (16%) Query: 34 QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86 Q +R+L Y + GGK R L+ E L + A +G IE + Y Sbjct: 40 QWVERMLD---YNVPGGKLNRGLSVIDSYQLLKEGKDLTDDEVFLASALGWCIEWLQAYF 96 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+ DD+ MDN + RRG+P + +V I +G++ + + LK + RS+ Sbjct: 97 LVLDDI--MDNSHTRRGQP-CWFKVPKVGMIAINDGII-----LRNHIPRILKKHFRSKP 148 Query: 147 ----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF--- 191 +L L + + Q GQM+D+ E + I + KT + Sbjct: 149 YYVDLLDLFNEVEFQ-TASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPV 207 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 AC +MA + ++ ++GI FQ+ DD LDC Sbjct: 208 AC--ALLMAGENLENHPTVKDVLIDMGIYFQVQDDYLDC 244 >gi|224010788|ref|XP_002294351.1| geranylgeranyl diphosphate synthetase [Thalassiosira pseudonana CCMP1335] gi|220969846|gb|EED88185.1| geranylgeranyl diphosphate synthetase [Thalassiosira pseudonana CCMP1335] Length = 349 Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 24/192 (12%) Query: 50 GKKIRSFLVTECASLF-NVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GK +R L+ +C L+ V L V A + +H SL+ DD+ DN +RRG+P Sbjct: 31 GKDVRGKLI-DCFQLWLGVESEGVLEEVKAIVADLHNASLLIDDIE--DNSKLRRGQPVA 87 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H + + I N + A E ++ + ML+L GQ DI Sbjct: 88 HSIFGVASVINTANYVYFMALERCFLLGSEGAMKVFVSEMLNLHR---------GQGQDI 138 Query: 168 QDEFID------ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 Q + D E+Q + KTG L A G + + A++ + NLG+ F Sbjct: 139 Q--WRDTTTCPTESQYLAMVTDKTGGLFRLAV--GLLQSFATKMKDVDFVPLVNNLGLYF 194 Query: 222 QLADDLLDCEED 233 Q+ DDL++ ++ Sbjct: 195 QIRDDLINLADE 206 >gi|89574388|gb|ABD77411.1| geranylgeranyl diphosphate synthase [Zingiber officinale] Length = 112 Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 26/35 (74%) Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 GAI+ AS ++ ERLR + ++G++FQ+ DD+LD Sbjct: 9 GAIVGGASDDQIERLRKYARSIGLLFQVVDDILDV 43 >gi|186704302|dbj|BAG30960.1| geranylgeranyl diphosphate synthase [Phomopsis amygdali] Length = 424 Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 17/183 (9%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK+ R+ ++ + F V + + + +H SL+ DD+ DN +RRG+P H Sbjct: 145 SGKEFRTLILNAFNAWFRVPPESLTIICDVVRMLHTSSLLIDDI--QDNSLLRRGRPVAH 202 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDI 167 Y I GN Y + + + +L+ N S L + + L +G GQ L Sbjct: 203 SIYGVAQTINTGN----YVYFLAAKELNKLR-NAASALEVFTAEMLNLHRGQ--GQELYW 255 Query: 168 QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC--FGENLGIIFQL 223 +D E + + KTG L A + +M S C + LG+++Q+ Sbjct: 256 RDTLKCPTEDEYLKMVSNKTGGLFRMAVK---LMQAESPAGPMAPVCDKLVQLLGLVYQI 312 Query: 224 ADD 226 ADD Sbjct: 313 ADD 315 >gi|1549220|dbj|BAA13462.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus] Length = 344 Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 26/199 (13%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 Y GGK +R L A L A+E + L+HDD+ D RRG+ Sbjct: 34 YPRRGGKMLRGLLTVYSALAHGAPLEAGLETATALELFQNWVLVHDDI--EDGSEERRGR 91 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISS-------PKTQLKDNIRSQLMLSLTHNIGLQ 157 P +H + A+ AG+ + + +++ P L + + ++ L Sbjct: 92 PALHRLHPMPLALNAGDAMHAEMWGLLAEGLARGLFPPEVLLEFHEVVRRTAYGQHLDLL 151 Query: 158 GMLGGQM-LDIQDEF--IDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 LGG L +D F + V+ + ++ G L+ A E+ LR Sbjct: 152 WTLGGTFDLRPEDYFRMVAHKAVYYTAVVPLRLGVLLVGKTPPAAY-------EEGGLR- 203 Query: 213 FGENLGIIFQLADDLLDCE 231 LG FQ+ DD+L+ E Sbjct: 204 ----LGTAFQIVDDVLNLE 218 >gi|224808192|gb|ACN63187.1| farnesyl diphosphate synthase [Euphorbia pekinensis] Length = 342 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 34/237 (14%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LTALR 74 +LL TA + + Y + GGK R V + L A Sbjct: 18 ELLNDTAFEWSPDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKQGEELTEEEIFLASA 77 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +G IE + Y L+ DD+ MD + RRG+P + +V I A +G++ P Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDGSHTRRGQPC-WFRLPKVGMIAANDGIMLRN----HIP 130 Query: 135 KTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK 182 + LK + R + +L L + + Q GQM+D+ E + I + Sbjct: 131 RI-LKKHFRGKPYYVDLLDLFNEVEFQTA-SGQMIDLITTLEGEKDLNKYTLSLHRRIVQ 188 Query: 183 MKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT + AC +MA S + ++ +GI FQ+ DD LDC D PK Sbjct: 189 YKTAYYSFYLPVAC--ALLMAGESLDNHIDVQNILVQMGIYFQVQDDYLDCYGD-PK 242 >gi|317030986|ref|XP_001392584.2| polyprenyl synthetase [Aspergillus niger CBS 513.88] Length = 515 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 14/181 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 K R+ L+ + V + + +H SL+ DD+ D+ +RRGKP VH Sbjct: 197 SKGFRNHLIDALQEWYKVPQASLAVISGVASLLHEASLMLDDI--QDDSPLRRGKPAVH- 253 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168 T G + + F I ++ + L+ + + L+ S + + + + GQ D+Q Sbjct: 254 -----TIFGVGQTINSARFHINNALRLCLQLSPSASLIFSASISDQIAQLFTGQAHDLQW 308 Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 E F + K GAL+ S + A+QN L F +G QL D Sbjct: 309 ARHKSIPTEEDYFRMVDGKNGALLILI--SRLMQNEATQNRTLDLTHFMNLIGRSHQLRD 366 Query: 226 D 226 D Sbjct: 367 D 367 >gi|157072593|gb|ABV08819.1| farnesyl diphosphate synthetase [Salvia miltiorrhiza] gi|315019238|gb|ADT70780.1| farnesyl pyrophosphate synthase [Salvia miltiorrhiza] Length = 349 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 32/217 (14%) Query: 34 QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYS 86 Q +R+L Y + GGK R V + L A +G +E + Y Sbjct: 40 QWVERMLD---YNVPGGKLNRGLSVIDSYKLLKGGKDLTDDEVFLASALGWCVEWLQAYF 96 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+ DD+ MDN + RRG+P + +V I +G++ + + LK + R++ Sbjct: 97 LVLDDI--MDNSHTRRGQPC-WFRVPKVGMIAINDGII-----LRNHIPRILKKHFRTKP 148 Query: 147 ----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCFACE 194 +L L + + Q GQM+D+ E + I + KT + Sbjct: 149 YYVDLLDLFNEVEFQ-TASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPV 207 Query: 195 SGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230 + A++ EK ++ N+GI FQ+ DD LDC Sbjct: 208 ACALLMAGEDLEKHPTVKDVLINMGIYFQVQDDYLDC 244 >gi|122938158|gb|ABC46412.2| geranylgeranyl diphosphate synthase [Gibberella intermedia] Length = 392 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 18/188 (9%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L K IR + V + I +H SLI D DN +RRGKP+ Sbjct: 106 LPSKGIRGAFIDSLNVWLEVPEDETSVIKEVIGMLHNSSLIDD---FQDNSPLRRGKPST 162 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H + AI ++ A E +++D + + +T I + GQ +D+ Sbjct: 163 HTVFGPAQAINTATYVIVKAIE-------KIQDIVGHDALADVTGTIT--TIFQGQAMDL 213 Query: 168 Q---DEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIF 221 + + Q +++ +TGAL + E A+ + AS ++ E L LG F Sbjct: 214 WWTANAIVPSIQEYLLMVNDETGALFRLSLELLALNSEASISDSALESLSSAVSLLGQYF 273 Query: 222 QLADDLLD 229 Q+ DD ++ Sbjct: 274 QIRDDYMN 281 >gi|150261574|pdb|2Q80|A Chain A, Crystal Structure Of Human Geranylgeranyl Pyrophosphate Synthase Bound To Ggpp gi|150261575|pdb|2Q80|B Chain B, Crystal Structure Of Human Geranylgeranyl Pyrophosphate Synthase Bound To Ggpp gi|150261576|pdb|2Q80|C Chain C, Crystal Structure Of Human Geranylgeranyl Pyrophosphate Synthase Bound To Ggpp gi|150261577|pdb|2Q80|D Chain D, Crystal Structure Of Human Geranylgeranyl Pyrophosphate Synthase Bound To Ggpp gi|150261578|pdb|2Q80|E Chain E, Crystal Structure Of Human Geranylgeranyl Pyrophosphate Synthase Bound To Ggpp gi|150261579|pdb|2Q80|F Chain F, Crystal Structure Of Human Geranylgeranyl Pyrophosphate Synthase Bound To Ggpp Length = 301 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 13 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 70 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 71 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 125 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++Q KTG L A +M S + KE L+ Sbjct: 126 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 175 Query: 212 CFGENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 176 PLLNTLGLFFQIRDD 190 >gi|4758430|ref|NP_004828.1| geranylgeranyl pyrophosphate synthase [Homo sapiens] gi|83700220|ref|NP_001032354.1| geranylgeranyl pyrophosphate synthase [Homo sapiens] gi|332812275|ref|XP_003308874.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1 [Pan troglodytes] gi|332812277|ref|XP_003308875.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2 [Pan troglodytes] gi|332812279|ref|XP_003339061.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Pan troglodytes] gi|332812283|ref|XP_003308876.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3 [Pan troglodytes] gi|6831549|sp|O95749|GGPPS_HUMAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|5410359|gb|AAD43050.1|AF125394_1 gerannylgeranyl pyrophosphate synthase [Homo sapiens] gi|12024672|gb|AAG45581.1|AF057698_1 geranylgeranyl pyrophosphate synthetase [Homo sapiens] gi|4520350|dbj|BAA75909.1| geranylgeranyl diphosphate synthase [Homo sapiens] gi|4586866|dbj|BAA76511.1| GGPP synthase [Homo sapiens] gi|4730813|dbj|BAA77251.1| geranylgeranyl pyrophosphate synthase [Homo sapiens] gi|13528915|gb|AAH05252.1| Geranylgeranyl diphosphate synthase 1 [Homo sapiens] gi|55960163|emb|CAI13753.1| geranylgeranyl diphosphate synthase 1 [Homo sapiens] gi|119590422|gb|EAW70016.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens] gi|119590423|gb|EAW70017.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens] gi|119590425|gb|EAW70019.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens] gi|261861372|dbj|BAI47208.1| geranylgeranyl diphosphate synthase 1 [synthetic construct] gi|312152218|gb|ADQ32621.1| geranylgeranyl diphosphate synthase 1 [synthetic construct] Length = 300 Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++Q KTG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 175 PLLNTLGLFFQIRDD 189 >gi|194042553|ref|XP_001924804.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Sus scrofa] Length = 300 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++Q KTG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 175 PLLNTLGLFFQIRDD 189 >gi|182440724|ref|YP_001828443.1| putative polyprenyl synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178469240|dbj|BAG23760.1| putative polyprenyl synthetase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 351 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Query: 50 GKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK++R+ F + + +R A++E IH +++HDDL +D+ +R G+PT H Sbjct: 51 GKRLRAAFCYWGWRAAGQPDSDALVRAAASLELIHAAAVVHDDL--IDDSALRHGRPTAH 108 Query: 109 I 109 I Sbjct: 109 I 109 >gi|326781397|ref|ZP_08240662.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1] gi|326661730|gb|EGE46576.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1] Length = 351 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Query: 50 GKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK++R+ F + + +R A++E IH +++HDDL +D+ +R G+PT H Sbjct: 51 GKRLRAAFCYWGWRAAGQPDSDALVRAAASLELIHAAAVVHDDL--IDDSALRHGRPTAH 108 Query: 109 I 109 I Sbjct: 109 I 109 >gi|309754779|gb|ADO87007.1| E,E-farnesyl diphosphate synthase [Santalum album] Length = 342 Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 30/216 (13%) Query: 34 QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86 Q DR+L Y + GGK R L+ E L + A +G IE + Y Sbjct: 33 QWVDRMLD---YNVPGGKLNRGLSVIDSYELLKEGKELTDDEIFLASALGWCIEWLQAYF 89 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+ DD+ MD + RRG+P + EV I +G++ I K K+ Sbjct: 90 LVLDDI--MDGSHTRRGQPC-WFRLPEVGLIAVNDGIMLRN-HIPRILKKHFKNKPYYVE 145 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM-----IQKMKTGALMCFACESGAI 198 +L L + + Q GQM+D+ D ++ M I + KT + + A+ Sbjct: 146 LLDLFNEVEFQTT-SGQMIDLITTLEGQKDLSKYSMPIHHRIVQYKTAYYSFYLPVACAL 204 Query: 199 MAHA----SQNEKERLRCFGENLGIIFQLADDLLDC 230 + S E E++ +G FQ+ DD LDC Sbjct: 205 LMSGENLDSHTEVEKILV---EMGTYFQVQDDYLDC 237 >gi|328768663|gb|EGF78709.1| hypothetical protein BATDEDRAFT_17386 [Batrachochytrium dendrobatidis JAM81] Length = 365 Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 76/200 (38%), Gaps = 25/200 (12%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK R V LTA + G IE + + LI DD+ MD RR Sbjct: 67 GGKMNRGLTVPSALESILKRELTADELFQSQVLGWCIEFLQAFFLISDDI--MDGSLTRR 124 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G+P + + E ++A N I K K + L L H + Q LG Sbjct: 125 GQPCWYKK--ENVGMVAINDSFIVEAAIYQMLKKYFKTHPAYGDFLELFHEVTYQTELG- 181 Query: 163 QMLDI---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RL 210 Q++D+ D F E ++++ KT A F M A E+ + Sbjct: 182 QLMDLITAPEGDVDLDRFSIEKHAYIVE-FKT-AYYSFYLPIALAMRLAGITEERAYIQA 239 Query: 211 RCFGENLGIIFQLADDLLDC 230 R LG FQ+ DD LDC Sbjct: 240 RDVLLPLGEYFQVQDDYLDC 259 >gi|326444518|ref|ZP_08219252.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] Length = 373 Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 75/194 (38%), Gaps = 24/194 (12%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKP--- 105 G +R L+ A L +E +H SL H P D G RR P Sbjct: 76 GGLLRPLLLVRSALAVGGTLAPVLPAAVGLEYVHMGSLGHRTGAPGSDPG--RRDVPGAP 133 Query: 106 ----TVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNI----RSQLMLSLTHNIG 155 V+ + TA++ G+ L FE +S + + +D I R Q G Sbjct: 134 DPRTAVYDRLGSATAVVMGSTPLYAWFEALSECAARGVREDRIAAVCRVQAEAGRAVRAG 193 Query: 156 L--QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + G+ LDI+ E ET ++ T AC GA +A A + L + Sbjct: 194 ATRERATAGR-LDIEAEHWLETA-----RLTTAVPFAAACRVGATLAGAPPEWTDALAVY 247 Query: 214 GENLGIIFQLADDL 227 GE LG+ +L ++L Sbjct: 248 GEQLGMALRLQEEL 261 >gi|294816184|ref|ZP_06774827.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Streptomyces clavuligerus ATCC 27064] gi|294328783|gb|EFG10426.1| dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Streptomyces clavuligerus ATCC 27064] Length = 396 Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 75/194 (38%), Gaps = 24/194 (12%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKP--- 105 G +R L+ A L +E +H SL H P D G RR P Sbjct: 99 GGLLRPLLLVRSALAVGGTLAPVLPAAVGLEYVHMGSLGHRTGAPGSDPG--RRDVPGAP 156 Query: 106 ----TVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNI----RSQLMLSLTHNIG 155 V+ + TA++ G+ L FE +S + + +D I R Q G Sbjct: 157 DPRTAVYDRLGSATAVVMGSTPLYAWFEALSECAARGVREDRIAAVCRVQAEAGRAVRAG 216 Query: 156 L--QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 + G+ LDI+ E ET ++ T AC GA +A A + L + Sbjct: 217 ATRERATAGR-LDIEAEHWLETA-----RLTTAVPFAAACRVGATLAGAPPEWTDALAVY 270 Query: 214 GENLGIIFQLADDL 227 GE LG+ +L ++L Sbjct: 271 GEQLGMALRLQEEL 284 >gi|332236282|ref|XP_003267333.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1 [Nomascus leucogenys] gi|332236284|ref|XP_003267334.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2 [Nomascus leucogenys] gi|332236286|ref|XP_003267335.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3 [Nomascus leucogenys] gi|332236288|ref|XP_003267336.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4 [Nomascus leucogenys] Length = 300 Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++Q KTG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 175 PLLNTLGLFFQIRDD 189 >gi|164605010|dbj|BAF98301.1| farnesyl-diphosphate synthase [Hevea brasiliensis] Length = 342 Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 38/241 (15%) Query: 15 RIDTILDDLLLQTASHMQT----QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH- 69 ++ ++L LL+ + T Q +R+L Y + GGK R V + L Sbjct: 10 KVYSVLKQELLEDPAFEWTPDSRQWVERMLD---YNVPGGKLNRGLSVIDSYKLLKEGQE 66 Query: 70 ------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A +G IE + Y L+ DD+ MD+ + RRG+P + +V I A +G+ Sbjct: 67 LTEEEIFLASALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPC-WFRVPKVGLIAANDGI 123 Query: 124 LTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 L P+ LK + R + +L L + + Q GQM+D+ +E + Sbjct: 124 LLRN----HIPRI-LKKHFRGKAYYVDLLDLFNEVEFQTA-SGQMIDLITTLEEEKDLSK 177 Query: 180 --------IQKMKTGALMCFACESGAIMAHASQNEKERL--RCFGENLGIIFQLADDLLD 229 I + KT A F + A +N + + +GI FQ+ DD LD Sbjct: 178 YTLSLHRRIVQYKT-AYYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLD 236 Query: 230 C 230 C Sbjct: 237 C 237 >gi|50289191|ref|XP_447025.1| hypothetical protein [Candida glabrata CBS 138] gi|49526334|emb|CAG59958.1| unnamed protein product [Candida glabrata] Length = 332 Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 13/189 (6%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK R+ L+ + ++ + +E +H SLI DD+ DN +RRG H+ Sbjct: 36 GKNFRAKLIHLFNQFYLLDENIIQTLTQIVEILHNSSLIIDDIE--DNSQLRRGVVASHM 93 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 Y +I N + A +++ + D + S ++ + N L + GQ LDI Sbjct: 94 LYGVPMSINTANYMYFVAMDLL---RNLSHDAVTSNDLMKI-FNEELLYLHRGQGLDIYW 149 Query: 168 QDEFID----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 +D E F + KTG L + ++ Q +K L G LGII+Q+ Sbjct: 150 RDSLPKVVPTEEMYFNMVMNKTGGLFRLTLKIMERLSEYWQGQKS-LVPLGNLLGIIYQV 208 Query: 224 ADDLLDCEE 232 DD L+ + Sbjct: 209 RDDYLNLTD 217 >gi|302864751|ref|YP_003833388.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] gi|302567610|gb|ADL43812.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029] Length = 384 Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 44/214 (20%) Query: 47 LLGGKKIR-SFLVTECASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 L GGK++R +F + + L +A+E +H ++L+HDD+ MD RRG Sbjct: 74 LAGGKRVRPTFAYWGWRGVVGGEEPLCSVLPALSALELLHTFALVHDDV--MDASDTRRG 131 Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRS 144 PT H +Y E A++ G+ + +A ++ + P +L D R Sbjct: 132 LPTAHRAAAARHRAAGHTGDPDRYGEAVAVLIGDLCMVWADRLMAHAAVPAERLLDVRRC 191 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGA------LMCFACE 194 + + + GQ LD+ E + + + + KT + L+ AC Sbjct: 192 YDQMRVE-------TVAGQFLDVLGENDSASWTVDRALRVARYKTASYTVQRPLLFGACL 244 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +G A A +G +G FQL DDLL Sbjct: 245 AG---ADADDPLIAAYTRYGLAVGEAFQLRDDLL 275 >gi|219669206|ref|YP_002459641.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] gi|219539466|gb|ACL21205.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] Length = 326 Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 19/187 (10%) Query: 49 GGKKI-RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI-RRGKPT 106 GGK+ L+ +F + T + A+E + I DD+ DN + R P Sbjct: 46 GGKQYPWGNLLFTIGDVFGDSQETIVHGAVAMELYALAADIFDDIEDQDNDELPWRTIPA 105 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL----KDNIRSQLMLSLTHNIGLQGMLGG 162 AI N +L +F+ +++ Q ++I + ++ H + + G Sbjct: 106 AQ-------AINTANLILFLSFKALAAINDQALYRQANDIFQTMGITACHGQNQEFLYEG 158 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q + I Q F + K+GAL C+ A++A + L FG+NLGII Q Sbjct: 159 Q------DAITLAQYFDTARKKSGALTAGTCKLAAVLAGCDTSLILDLEKFGQNLGIISQ 212 Query: 223 LADDLLD 229 + +DL D Sbjct: 213 IKNDLRD 219 >gi|257079431|ref|ZP_05573792.1| polyprenyl synthetase [Enterococcus faecalis JH1] gi|256987461|gb|EEU74763.1| polyprenyl synthetase [Enterococcus faecalis JH1] Length = 201 Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 27/50 (54%) Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT L +C GA H+S+ + + G ++GI FQ+ DD+LD D Sbjct: 50 KTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTAD 99 >gi|154687280|ref|YP_001422441.1| ComQ [Bacillus amyloliquefaciens FZB42] gi|126362993|emb|CAM35811.1| competence protein ComQ [Bacillus amyloliquefaciens FZB42] gi|154353131|gb|ABS75210.1| ComQ [Bacillus amyloliquefaciens FZB42] Length = 286 Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 18/158 (11%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-IQYDEVTAIIAGNGLLTYAFEII 131 L +G IE + + I DD+ D +P ++ D+ ++ + T A ++I Sbjct: 41 LDLGTGIELLILAADIFDDIQDKD-------RPNAEWMKMDQAVSLNIATLIYTIALQVI 93 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 SS + L+L +Q M GQ +D+ D + E Q + K K+GAL Sbjct: 94 SSRDPE-------GLLLKTALKYTVQAM-EGQHIDLVDNTLTENQCIEMIKKKSGALTAL 145 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 A GA++ A++ + + + +G+ QL +DL + Sbjct: 146 ASMLGAVL--ATKRYQSDVEQYAFYIGVAAQLKNDLFE 181 >gi|297281802|ref|XP_002802154.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1 [Macaca mulatta] gi|297281804|ref|XP_002802155.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2 [Macaca mulatta] gi|297281806|ref|XP_002802156.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3 [Macaca mulatta] gi|297281808|ref|XP_002802157.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4 [Macaca mulatta] Length = 300 Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++Q KTG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 175 PLLNTLGLFFQIRDD 189 >gi|301105393|ref|XP_002901780.1| farnesyl pyrophosphate synthetase [Phytophthora infestans T30-4] gi|262099118|gb|EEY57170.1| farnesyl pyrophosphate synthetase [Phytophthora infestans T30-4] Length = 345 Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 33/220 (15%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECA-SLFNVNHLT------ALRVGAAIECIHCYSLIH 89 D + + Y +GGK R V C ++ LT A +G IE + + LI Sbjct: 35 DWVDEVVEYNCIGGKLNRGISVVHCTQAMAPGKELTPELKEKASVLGWCIEWLQAFFLIA 94 Query: 90 DDLPSMDNGYIRRGKPTVHIQYD-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-- 146 DD+ MD RRG+P + + + ++ AI L + F+I LK + RS+ Sbjct: 95 DDI--MDESITRRGQPCWYRKPNVKMIAINDAFLLEAFVFQI-------LKKHFRSEPYY 145 Query: 147 --MLSLTHNIGLQGMLGGQMLDIQDEFID-ETQV--FMIQKM------KTGALMCFACES 195 ++ H++ +G Q+LD+ + +D E + F +++ KT + + Sbjct: 146 VDLVETFHDVVFHTEIG-QLLDLTSQPLDGEVYLDRFTVERYRQIVINKTAYYTFYLSAA 204 Query: 196 GAIMAHASQNEKER--LRCFGENLGIIFQLADDLLDCEED 233 A+ + +E + +G FQ+ DD LDC D Sbjct: 205 CAMFLNGVVDEASHSLAKNICVQIGEYFQIQDDFLDCYGD 244 >gi|151944962|gb|EDN63217.1| FPP synthetase [Saccharomyces cerevisiae YJM789] Length = 352 Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 24/222 (10%) Query: 28 ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAA 78 A M + D ++ Y GGK R V + ++ + + L +G Sbjct: 29 AYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSKKTVEQLGQEEYEKVAILGWC 88 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE + Y L+ DD+ MD RRG+P + + EV I + + A I K+ Sbjct: 89 IELLQAYFLVADDM--MDKSITRRGQPCWY-KVPEVGEIAINDAFMLEA-AIYKLLKSHF 144 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK------MKTGALMC 190 ++ + L H + Q LG Q++D+ D+ + F ++K KT Sbjct: 145 RNEKYYIDITELFHEVTFQTELG-QLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSF 203 Query: 191 FACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230 + + A+ +EK+ + R LG FQ+ DD LDC Sbjct: 204 YLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 245 >gi|115491941|ref|XP_001210598.1| hypothetical protein ATEG_00512 [Aspergillus terreus NIH2624] gi|114197458|gb|EAU39158.1| hypothetical protein ATEG_00512 [Aspergillus terreus NIH2624] Length = 358 Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 15/202 (7%) Query: 31 MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 + + N+R+L LL GK IR L+ + V + + + +H SL+ Sbjct: 46 LWSAENERILMGPYDYLLQHPGKDIRRQLINAFDAWLQVPPDSLAIINKVVAMLHTSSLL 105 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 DD+ D+ +RRG P H Y I + N + A + + +I + +L Sbjct: 106 IDDVE--DSSALRRGIPVAHSIYGTAQTINSANYVYFLALQELQKLNNPAAIDIYVKELL 163 Query: 149 SLTHNIGLQGMLGGQML-DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +L G++ + +DE++ M+ KTG L A + +M S+ K Sbjct: 164 NLHRGQGMELFWRDTLTCPTEDEYLQ-----MVGN-KTGGLFRLAVK---LMQAESKTGK 214 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 + + LG+IFQ+ DD L+ Sbjct: 215 DCVSLVNV-LGLIFQICDDYLN 235 >gi|58699201|ref|ZP_00374011.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534279|gb|EAL58468.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila ananassae] Length = 69 Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRV 75 +T + L+++ + ++L+SA+RY LL K IRSFLV + +FN + V Sbjct: 4 ETTKNLLIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISV 63 Query: 76 GAAIE 80 AAIE Sbjct: 64 AAAIE 68 >gi|315501045|ref|YP_004079932.1| polyprenyl synthetase [Micromonospora sp. L5] gi|315407664|gb|ADU05781.1| Polyprenyl synthetase [Micromonospora sp. L5] Length = 384 Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 44/214 (20%) Query: 47 LLGGKKIR-SFLVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103 L GGK++R +F + + L +A+E +H ++L+HDD+ MD RRG Sbjct: 74 LAGGKRVRPTFAYWGWRGVVGGEEPLCSVLPALSALELLHTFALVHDDV--MDASDTRRG 131 Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRS 144 PT H +Y E A++ G+ + +A ++ + P +L D R Sbjct: 132 LPTAHRAAAARHRAAGHTGDPDRYGEAVAVLIGDLCMVWADRLMAHAAVPAERLLDVRRC 191 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGA------LMCFACE 194 + + + GQ LD+ E + + + + KT + L+ AC Sbjct: 192 YDQMRVE-------TVAGQFLDVLGENDSASWTVDRALRVARYKTASYTVQRPLLFGACL 244 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +G A A +G +G FQL DDLL Sbjct: 245 AG---ADADDPLIAAYTRYGLAVGEAFQLRDDLL 275 >gi|149690652|ref|XP_001492882.1| PREDICTED: similar to geranylgeranyl diphosphate synthase 1 [Equus caballus] Length = 299 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL Y L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 12 LLEPYEYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLEHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++Q KTG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 175 PLLNTLGLFFQIRDD 189 >gi|325283242|ref|YP_004255783.1| Polyprenyl synthetase [Deinococcus proteolyticus MRP] gi|324315051|gb|ADY26166.1| Polyprenyl synthetase [Deinococcus proteolyticus MRP] Length = 331 Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 79/208 (37%), Gaps = 34/208 (16%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE----------CIHCYSLIHDDLPS 94 Y GGK IRS L+ A + GA E + LIHDD+ Sbjct: 34 YPQRGGKGIRSELLLLSAQAHGLAE-----GGAGWERALWLAAALELFQNWVLIHDDI-- 86 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 +D+ RRG P +H + A+ AG+ L Y + + K L L++ H Sbjct: 87 VDDSDERRGAPALHKLHGVPLALNAGDALHAYMWAAVQ--KAGLDAGFSE--FLTMIHRT 142 Query: 155 GLQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKE 208 GQ LD+ + + + ++KTG + GA+ A Q Sbjct: 143 A-----EGQHLDVSWVEHGEWNLQPADYLEMVRLKTGFYTIVTPLRLGALA--AGQPPHP 195 Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236 G +LG FQ+ DD+L+ D K Sbjct: 196 DFEAAGLSLGTAFQIRDDVLNLTGDPAK 223 >gi|149238027|ref|XP_001524890.1| hypothetical protein LELG_03922 [Lodderomyces elongisporus NRRL YB-4239] gi|146451487|gb|EDK45743.1| hypothetical protein LELG_03922 [Lodderomyces elongisporus NRRL YB-4239] Length = 347 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 20/205 (9%) Query: 43 IRYALLGGKKIRS-FLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYI 100 IR +RS F+ + F++ L+ + IE +H SL+ DD+ D+ Sbjct: 27 IRKLASNNNNVRSRFINAFNETFFHITDQEVLQLINEVIEILHNASLLIDDVE--DSSNF 84 Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRG P+ H++Y I GN + A E + + + +L + L+L I + M Sbjct: 85 RRGYPSAHMKYGVPLTINCGNLMYFEAIEKVYNLWRLKLGKEDTTLATLALVWEIVMPEM 144 Query: 160 LG---GQMLDI--QDEFIDETQVFMI------QKMKTGALMCFACESGAIMAHASQNEKE 208 GQ LDI +D D + + K KTG L A + + S + Sbjct: 145 KNFHKGQGLDIYWRDNLPDLESLPSVVDYCQMAKDKTGGLFRLAVRLLRLFSSGSTHLDS 204 Query: 209 RLRCFGEN----LGIIFQLADDLLD 229 E+ LG+I+Q+ DD L+ Sbjct: 205 EYNGVFESIANCLGVIYQIRDDYLN 229 >gi|126460364|ref|YP_001056642.1| polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548] gi|126250085|gb|ABO09176.1| Polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548] Length = 261 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 25/167 (14%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L A +E +H SL+ DD+ MD RRG T Y + AI+A + L+ + Sbjct: 69 LEAAAIVELLHVVSLLQDDV--MDQHDQRRGIKTPRAMYGDGRAIVASDWLIAESI---- 122 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 ++ N+ + ++ L Q + GQ LD++ E D+ F KT L+ Sbjct: 123 ----KMAVNLGADVVTYLADVA--QRLSVGQALDLEGER-DKAAEF-----KTAPLI--- 167 Query: 193 CESGAIMAHASQNEKERL---RCFGENLGIIFQLADDLLDCEEDLPK 236 E+ +M +E + + G LGI++Q +DD D + P+ Sbjct: 168 -EAALVMPLVILGRRELIETAKKLGTKLGILYQYSDDYSDENVERPE 213 >gi|323308567|gb|EGA61811.1| Erg20p [Saccharomyces cerevisiae FostersO] Length = 352 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 24/222 (10%) Query: 28 ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAA 78 A M + D ++ Y GGK R V + ++ + + L +G Sbjct: 29 AYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWC 88 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE + Y L+ DD+ MD RRG+P + + EV I + + A I K+ Sbjct: 89 IELLQAYFLVADDM--MDKSITRRGQPCWY-KVPEVGEIAINDAFMLEA-AIYKLLKSHF 144 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK------MKTGALMC 190 ++ + L H + Q LG Q++D+ D+ + F ++K KT Sbjct: 145 RNEKYYIDITELFHEVTFQTELG-QLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSF 203 Query: 191 FACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230 + + A+ +EK+ + R LG FQ+ DD LDC Sbjct: 204 YLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 245 >gi|50550901|ref|XP_502923.1| YALI0D17050p [Yarrowia lipolytica] gi|49648791|emb|CAG81114.1| YALI0D17050p [Yarrowia lipolytica] Length = 327 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 14/187 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 G IR L+ ++ V+ + + +H SL+ DD+ DN +RRG P H Sbjct: 32 GHNIREHLIAAFGAVIKVDKSDLETISHITKILHNSSLLVDDVE--DNSMLRRGLPAAHC 89 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + I + N + A + + K+ +I ++ M++L G+ + + L Sbjct: 90 LFGVPQTINSANYMYFVALQEVLKLKSYDAVSIFTEEMINLHRGQGMD-LYWRETLTCPS 148 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLA 224 E DE ++ KTG L A +++ AS+ E L + LG+I+Q+ Sbjct: 149 E--DEYLEMVVH--KTGGLFRLALR--LMLSVASKQEDHEKINFDLTHLTDTLGVIYQIL 202 Query: 225 DDLLDCE 231 DD L+ + Sbjct: 203 DDYLNLQ 209 >gi|323304418|gb|EGA58189.1| Erg20p [Saccharomyces cerevisiae FostersB] Length = 352 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 24/222 (10%) Query: 28 ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAA 78 A M + D ++ Y GGK R V + ++ + + L +G Sbjct: 29 AYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWC 88 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE + Y L+ DD+ MD RRG+P + + EV I + + A I K+ Sbjct: 89 IELLQAYFLVADDM--MDKSITRRGQPCWY-KVPEVGEIAINDAFMLEA-AIYKLLKSHF 144 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK------MKTGALMC 190 ++ + L H + Q LG Q++D+ D+ + F ++K KT Sbjct: 145 RNEKYYIDITELFHEVTFQTELG-QLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSF 203 Query: 191 FACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230 + + A+ +EK+ + R LG FQ+ DD LDC Sbjct: 204 YLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 245 >gi|298346921|ref|YP_003719608.1| geranylgeranyl pyrophosphate synthase [Mobiluncus curtisii ATCC 43063] gi|298236982|gb|ADI68114.1| geranylgeranyl pyrophosphate synthase [Mobiluncus curtisii ATCC 43063] Length = 361 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 30/177 (16%) Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----------QYDEVTAIIAGN 121 L +GA++E +L+HDD+ +DN RRG P I ++ + AI+ G+ Sbjct: 79 LDLGASLELFQTSALVHDDI--IDNAIKRRGLPAAQIAFMTSFPMGGPRFGDSAAILWGD 136 Query: 122 GLLTYAFEIISSPKTQLK-DNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173 L A S + L +N S +++ + GQ LD+ E + Sbjct: 137 LLYAAANSYFSQAISTLSVENAHRASNFFVTMQAEVAY-----GQFLDLSAETRELSPDM 191 Query: 174 ----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E + +I+ + GA + A+ + E+L F LG+ +QL DD Sbjct: 192 PPSREAAMEIIKHKTARYSVVIPLLLGAALRGANDSLIEQLEGFATPLGVAYQLRDD 248 >gi|255937223|ref|XP_002559638.1| Pc13g12220 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584258|emb|CAP92291.1| Pc13g12220 [Penicillium chrysogenum Wisconsin 54-1255] Length = 369 Score = 40.0 bits (92), Expect = 0.24, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 13/181 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR L+ + V + + + +H SL+ DD+ DN +RRG P H Sbjct: 82 GKDIRRQLIHAFNAWLQVPPASLSIITKVVTMLHTSSLLIDDVE--DNSVLRRGIPVAHN 139 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I + N + A + + +I Q ML+L G+ + + Sbjct: 140 IFGTAQTINSANYVYFLALQEVQQLNNPAAIDIYVQEMLNLHRGQGMDLFWRDTLTCPTE 199 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE+++ M+ KTG L A + +M S K+ + +G+IFQ+ DD L Sbjct: 200 DEYLE-----MVGN-KTGGLFRLAVK---LMQAESTTGKDCVALVNV-MGLIFQICDDYL 249 Query: 229 D 229 + Sbjct: 250 N 250 >gi|301792142|ref|XP_002931038.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Ailuropoda melanoleuca] Length = 300 Score = 40.0 bits (92), Expect = 0.24, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 81/195 (41%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + + +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++Q KTG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 175 PLLNTLGLFFQIRDD 189 >gi|2957271|gb|AAC05595.1| geranylgeranyl pyrophosphate synthase [Drosophila melanogaster] Length = 335 Score = 40.0 bits (92), Expect = 0.24, Method: Compositional matrix adjust. Identities = 50/208 (24%), Positives = 82/208 (39%), Gaps = 32/208 (15%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++LLQ +++Q + GK+ RS L + ++G ++ Sbjct: 21 DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPGEKLAQIGNIVQ 66 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H SL+ +D N +RRG P H Y + I A N L A E + Sbjct: 67 MLHNSSLLIED-----NSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEVR 121 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198 + ++ +L L G++ + +D F E+ ++ KTG L A + Sbjct: 122 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 171 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226 M S N KE LG+ FQ+ DD Sbjct: 172 MQLFSSN-KEDYSKLTAILGLYFQIRDD 198 >gi|6322294|ref|NP_012368.1| Erg20p [Saccharomyces cerevisiae S288c] gi|120479|sp|P08524|FPPS_YEAST RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|171517|gb|AAA34606.1| farnesyl diphosphate synthetase (EC 2.5.1.1) [Saccharomyces cerevisiae] gi|1008358|emb|CAA89462.1| ERG20 [Saccharomyces cerevisiae] gi|190409344|gb|EDV12609.1| farnesyl diphosphate synthetase [Saccharomyces cerevisiae RM11-1a] gi|207344136|gb|EDZ71372.1| YJL167Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256271340|gb|EEU06405.1| Erg20p [Saccharomyces cerevisiae JAY291] gi|285812738|tpg|DAA08636.1| TPA: Erg20p [Saccharomyces cerevisiae S288c] gi|290771068|emb|CAY80618.2| Erg20p [Saccharomyces cerevisiae EC1118] gi|323332955|gb|EGA74357.1| Erg20p [Saccharomyces cerevisiae AWRI796] gi|323337022|gb|EGA78278.1| Erg20p [Saccharomyces cerevisiae Vin13] gi|323348011|gb|EGA82269.1| Erg20p [Saccharomyces cerevisiae Lalvin QA23] Length = 352 Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 24/222 (10%) Query: 28 ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAA 78 A M + D ++ Y GGK R V + ++ + + L +G Sbjct: 29 AYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWC 88 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE + Y L+ DD+ MD RRG+P + + EV I + + A I K+ Sbjct: 89 IELLQAYFLVADDM--MDKSITRRGQPCWY-KVPEVGEIAINDAFMLEA-AIYKLLKSHF 144 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK------MKTGALMC 190 ++ + L H + Q LG Q++D+ D+ + F ++K KT Sbjct: 145 RNEKYYIDITELFHEVTFQTELG-QLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSF 203 Query: 191 FACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230 + + A+ +EK+ + R LG FQ+ DD LDC Sbjct: 204 YLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 245 >gi|256390769|ref|YP_003112333.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928] gi|256356995|gb|ACU70492.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928] Length = 367 Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 42/223 (18%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDL 92 L +A+R L GGK +R + TA + A++E + +LIHDD Sbjct: 42 LPTALREFLDGGKLMRPGFCYWGWRGVLGDSATAQEEEGIVHAAASLELLQASALIHDDY 101 Query: 93 PSMDNGYIRRGKPTVHIQY------------DE----VTAIIAGNGLLTYAFEIISSPKT 136 MD+ RRG P +H ++ DE AI+ G+ LT+ E+ + Sbjct: 102 --MDDSDTRRGMPAIHRRFAAAHREAAWEGSDERFGAAAAILLGDVCLTWCDEMFAGNGL 159 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACE 194 + ++ + ++ GQ LD+ Q +DE + Q+ +T ++ F Sbjct: 160 PAERTAAARRYFDVMRTE----VMAGQYLDVLAQAHGLDEPER-AAQRAQT--VIRFKSA 212 Query: 195 S---------GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 GA++A ++ +G LG FQL DD+L Sbjct: 213 KYTIERPLHVGAMLAGGGKDVIAAYSAYGLPLGEAFQLRDDVL 255 >gi|46367743|dbj|BAD15361.1| farnesyl diphosphate synthase [Lactarius chrysorrheus] Length = 381 Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 12/157 (7%) Query: 18 TILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71 + DDLL H M + + ++ Y + GGK R V + ++ LT Sbjct: 37 VVRDDLLEDFRKHNMPEEAIEYYQRSMDYNVPGGKLNRGMSVVDSVAILKGRELTESEYF 96 Query: 72 -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A +G A+E + Y L+ DD+ MD RRG+P + E +A N L I Sbjct: 97 QAAVLGWAVEWMQAYFLVSDDI--MDASITRRGQPCWYRT--EGVGFMAINDALILEGAI 152 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + ++ L H + Q + GQ++D+ Sbjct: 153 FQMIRKHFRKEPFYVDLIDLLHEVSYQTEM-GQLVDL 188 >gi|289615531|emb|CBI57772.1| putative farnesyltranstransferase [Sordaria macrospora] Length = 436 Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 13/178 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IRS +V + +V + + I +H SL+ DD+ DN +RRG P H Sbjct: 148 GKDIRSQMVKAFNAWLDVPSESLEVITKVISMLHTASLLVDDV--EDNSVLRRGFPVAHS 205 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I N + +A + + K +I S+ +L+L G+ + + Sbjct: 206 IFGIPQTINTSNYVYFHALQELQKLKNPKAVSIFSEELLNLHRGQGMDLFWRDTLTCPTE 265 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 D++++ M+ KTG L G + A +G+IFQ+ADD Sbjct: 266 DDYLE-----MVSN-KTGGLFRL----GIKLMQAESRSPVDCVPLVNIIGLIFQIADD 313 >gi|29468176|gb|AAO85432.1|AF479566_1 geranylgeranyl diphosphate synthase [Emericella nidulans] Length = 396 Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 17/183 (9%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R ++ V + + + +H SL+ DD+ DN +RRG P H Sbjct: 95 GKDLRRQMINAFNVWLKVPSESLAIITKVVAMLHTASLLIDDVE--DNSLLRRGIPVAHS 152 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 Y I + N + A + + K+ ++ Q +L+L G+ + + Sbjct: 153 IYGTAQTINSANYVYFLALQEVQKLKSPAAIDMYVQELLNLHRGQGMDLFWRDTLTCPSE 212 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG--ENLGIIFQLADD 226 DE+++ M+ KTG L A + +M S K+ C LG++FQ+ DD Sbjct: 213 DEYLE-----MVGN-KTGGLFRLAVK---LMQAESSTGKD---CVALVNVLGLVFQICDD 260 Query: 227 LLD 229 L+ Sbjct: 261 YLN 263 >gi|66363140|ref|XP_628536.1| long chain fatty acyl diphosphate synthase [Cryptosporidium parvum Iowa II] gi|46229548|gb|EAK90366.1| long chain fatty acyl diphosphate synthase [Cryptosporidium parvum Iowa II] Length = 466 Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 26/171 (15%) Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 +I+ IH SL+HDD+ +DN IRRGK + + I+ G+ L + + IS Sbjct: 187 SIQLIHSASLLHDDI--LDNSEIRRGKKAPYKIFGNKKTILLGDYLFSKSCLNIS----- 239 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLG-----GQMLDIQDEFIDET--------QVFMIQKMK 184 + +NI + +S+ ++G G +++ + D+ + + K Sbjct: 240 IIENINAMKCISIIAENLVKGEFSQLNGLGSLIEGLNNSKDKKGLVGNYFEKYLLKSYYK 299 Query: 185 TGALMCF---ACESGAIMAHASQNEKERL---RCFGENLGIIFQLADDLLD 229 T +L F AC A+ ++ E + G N G+ FQL DD+LD Sbjct: 300 TASLFSFGGIACSELLKKAYGNKLRMEMIIYSYYMGLNFGLAFQLMDDILD 350 >gi|326490349|dbj|BAJ84838.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326510595|dbj|BAJ87514.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 408 Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 33/208 (15%) Query: 45 YALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 Y + GGK R L+ E + + + A +G IE + +L+ DD+ DN Sbjct: 107 YNVPGGKLNRGLSVIDSYMLLREGTEVDDEDFYLACVLGWCIEWLQASALVLDDIT--DN 164 Query: 98 GYIRRGK------PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 Y RR PTV + +AI G L + II K K+ ++ L Sbjct: 165 AYTRRDNLCWYKLPTVGL-----SAINDGVLLKCHVQAII---KRYFKEKFYFMELMELW 216 Query: 152 HNIGLQGMLGGQMLDI-------QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHAS 203 + IGLQ +G QMLD+ +D Q + I K KT + + A++ + + Sbjct: 217 NEIGLQTAMG-QMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGA 275 Query: 204 Q-NEKERLRCFGENLGIIFQLADDLLDC 230 + ++ L+ +G+ FQ+ DD LDC Sbjct: 276 KLSDYVELKNVLIEMGVYFQIQDDYLDC 303 >gi|323354370|gb|EGA86209.1| Erg20p [Saccharomyces cerevisiae VL3] Length = 322 Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 89/219 (40%), Gaps = 24/219 (10%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAAIEC 81 M + D ++ Y GGK R V + ++ + + L +G IE Sbjct: 1 MPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWCIEL 60 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 + Y L+ DD+ MD RRG+P + + EV I + + A I K+ ++ Sbjct: 61 LQAYFLVADDM--MDKSITRRGQPCWY-KVPEVGEIAINDAFMLEA-AIYKLLKSHFRNE 116 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK------MKTGALMCFAC 193 + L H + Q LG Q++D+ D+ + F ++K KT + Sbjct: 117 KYYIDITELFHEVTFQTELG-QLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSFYLP 175 Query: 194 ESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230 + A+ +EK+ + R LG FQ+ DD LDC Sbjct: 176 VALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 214 >gi|316976387|gb|EFV59689.1| putative squamous cell carcinoma antigen recognized by T-cells 3 [Trichinella spiralis] Length = 1241 Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 11/136 (8%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 +P L + KR+D D+ +L + S ++ + L++ +Y + GK+IR L Sbjct: 906 VPRALSTSQKRMDK--DNSMLLSLSPPASKEEEELIAPFKYICSIPGKQIRVKLGFNL-- 961 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 NV++ + +E +H SL+ DD+ D+ +RRG P H Y T + N Sbjct: 962 WLNVDNEIVNAISEIVEMLHNASLMIDDIE--DSSELRRGMPVTHRIYGLPTTLNTAN-- 1017 Query: 124 LTYAFEIISSPKTQLK 139 Y + + S QL+ Sbjct: 1018 --YIYFVALSKTVQLR 1031 >gi|46109712|ref|XP_381914.1| hypothetical protein FG01738.1 [Gibberella zeae PH-1] Length = 757 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 15/133 (11%) Query: 14 KRIDT------ILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66 K++D+ L D++LQ M+ +D ++ RY L K +R+ + Sbjct: 432 KKVDSGADHKKTLSDIMLQELPPME---DDVVMEPYRYLCSLPSKGVRNKTIDALNFWLK 488 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V A + A E +H SL+ DD+ D+ +RRGKP+ H + E I + Sbjct: 489 VPIENANTIKAITESLHGSSLMLDDIE--DHSQLRRGKPSAHAVFGEAQTINSATFQYIQ 546 Query: 127 AFEIIS---SPKT 136 + +IS SPK Sbjct: 547 SVSLISQLRSPKA 559 >gi|297170553|gb|ADI21581.1| geranylgeranyl pyrophosphate synthase [uncultured verrucomicrobium HF0070_35E03] Length = 180 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 28/46 (60%) Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KTG L ACE G +A S+ + FG +LGII+Q+ DDL+D Sbjct: 13 KTGELFRAACEVGTHLAGFSKETTIQAGNFGSSLGIIYQIYDDLVD 58 >gi|145240169|ref|XP_001392731.1| farnesyltranstransferase [Aspergillus niger CBS 513.88] gi|134077245|emb|CAK45586.1| unnamed protein product [Aspergillus niger] Length = 389 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 13/181 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR L+ V + + + +H SL+ DD+ DN +RRG P H Sbjct: 103 GKDIRRQLINAFNVWLKVPPESLSIITKVVAMLHTASLLIDDV--EDNSILRRGIPVAHN 160 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 Y I + N + A + + +I Q +L+L G+ + + Sbjct: 161 IYGTAQTINSANYVYFLALQEVQKLNNPAAIDIYVQELLNLHRGQGMDLFWRDTLTCPSE 220 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 DE+++ M+ KTG L A + +M S + K+ + +G+IFQ+ DD L Sbjct: 221 DEYLE-----MVGN-KTGGLFRLAVK---LMQAESSSGKDCVSLVNV-MGLIFQICDDYL 270 Query: 229 D 229 + Sbjct: 271 N 271 >gi|328869898|gb|EGG18273.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium fasciculatum] Length = 300 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R+ L+ V V + ++ +H SL+ DD+ DN +RRG PT H Sbjct: 28 GKGVRALLIESFNHWLKVEDRVVKEVSSLVQSLHMSSLLIDDIE--DNSLLRRGTPTAHT 85 Query: 110 QY 111 Y Sbjct: 86 LY 87 >gi|89894766|ref|YP_518253.1| hypothetical protein DSY2020 [Desulfitobacterium hafniense Y51] gi|89334214|dbj|BAE83809.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 288 Score = 39.7 bits (91), Expect = 0.32, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 19/187 (10%) Query: 49 GGKKI-RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI-RRGKPT 106 GGK+ L+ +F + T + A+E + I DD+ DN + R P Sbjct: 8 GGKQYPWGNLLFTIGDVFGDSQETIVHGAVAMELYALAADIFDDIEDQDNDELPWRTIPA 67 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL----KDNIRSQLMLSLTHNIGLQGMLGG 162 AI N +L +F+ +++ Q ++I + ++ H + + G Sbjct: 68 AQ-------AINTANLILFLSFKALAAINDQALYRQANDIFQTMGITACHGQNQEFLYEG 120 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q + I Q F + K+GAL AC+ ++A + L FG+NLGII Q Sbjct: 121 Q------DAITLAQYFDTARKKSGALTAGACKLAGVLAGCDTSLILDLDKFGQNLGIISQ 174 Query: 223 LADDLLD 229 + +DL D Sbjct: 175 IKNDLQD 181 >gi|297626728|ref|YP_003688491.1| Farnesyltranstransferase / Geranylgeranyl pyrophosphate synthase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922493|emb|CBL57066.1| Farnesyltranstransferase / Geranylgeranyl pyrophosphate synthase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 358 Score = 39.7 bits (91), Expect = 0.33, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 5/79 (6%) Query: 39 LLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 L+ R GGK++R F A + L A E +H +L+HDDL + Sbjct: 45 LVGLARRFTAGGKRLRPAFCFWGHVAAGGAPADPTALLDATAGFELLHVAALVHDDL--I 102 Query: 96 DNGYIRRGKPTVHIQYDEV 114 D+ RRG P H Q +E+ Sbjct: 103 DDSDTRRGMPAAHRQLEEL 121 >gi|224089549|ref|XP_002308751.1| predicted protein [Populus trichocarpa] gi|222854727|gb|EEE92274.1| predicted protein [Populus trichocarpa] Length = 342 Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 18/167 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +G IE + Y L+ DD+ MD+ + RRG+P + +V I A +G+L I Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDSSHTRRGQPC-WFRLPKVGLIAANDGILLRN-HIPRIL 133 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTG 186 K +D +L L + + Q GQM+D+ E + I + KT Sbjct: 134 KNHFRDKAYYVDLLDLFNEVEFQTA-SGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTA 192 Query: 187 ALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + AC +MA + + ++ +G FQ+ DD LDC Sbjct: 193 YYSFYLPVAC--ALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDC 237 >gi|118486658|gb|ABK95166.1| unknown [Populus trichocarpa] Length = 342 Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 18/167 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +G IE + Y L+ DD+ MD+ + RRG+P + +V I A +G+L I Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDSSHTRRGQPC-WFRLPKVGLIAANDGILLRN-HIPRIL 133 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTG 186 K +D +L L + + Q GQM+D+ E + I + KT Sbjct: 134 KNHFRDKAYYVDLLDLFNEVEFQTA-SGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTA 192 Query: 187 ALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + AC +MA + + ++ +G FQ+ DD LDC Sbjct: 193 YYSFYLPVAC--ALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDC 237 >gi|213965295|ref|ZP_03393492.1| geranylgeranyl pyrophosphate synthase [Corynebacterium amycolatum SK46] gi|213952147|gb|EEB63532.1| geranylgeranyl pyrophosphate synthase [Corynebacterium amycolatum SK46] Length = 370 Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 24/148 (16%) Query: 101 RRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 RRG PT+H ++ AI+ G+ LT+A +++ S + R+ Sbjct: 114 RRGAPTIHKVFEAKHEANSWNGAADRFGISAAILIGDVALTWADDMMHSSGLSSEALTRA 173 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE----SGAIMA 200 + +LGGQ+LDI E +++V +K+ + E GA +A Sbjct: 174 LVPWRAMRT----EVLGGQLLDITAEASRDSRVETAEKINLFKTAAYTIERPLHIGAAIA 229 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLL 228 A E R FG ++G+ FQL DD L Sbjct: 230 GAPAELVEAYRSFGRDIGVAFQLRDDQL 257 >gi|238498722|ref|XP_002380596.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] gi|220693870|gb|EED50215.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] Length = 271 Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 27/170 (15%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 RV + E +H SL+ DD+ D+ +RRG+P H + + I + N LL A + + Sbjct: 14 RVKSIAETLHNASLLLDDIE--DSSPLRRGQPAAHTIFGQGQTINSANYLLIQAMDQVRQ 71 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKM 183 Q ++ + M + + GQ D+ QDE+++ MI + Sbjct: 72 LDNQRCMDVFVEEM---------RNLFIGQSFDLYWTRQGECPSQDEYLE-----MISQ- 116 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTG L A N L LG FQ+ DD + ED Sbjct: 117 KTGGLFRLLTRLMTEKASTQHNSTITLDSLVSLLGQYFQIRDDYKNLTED 166 >gi|62288317|gb|AAX78434.1| farnesyl diphosphate synthase [Anthonomus grandis] Length = 438 Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 86/212 (40%), Gaps = 25/212 (11%) Query: 38 RLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHD 90 R+ ++Y + GKK R L++ L + +LT A +G +E IH L+ D Sbjct: 128 RVARVLQYNVPNGKKNRGLILISAYKMLEDPKNLTPENIKLASVLGWCLEMIHSCFLVLD 187 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ MDN RRG + Q + A N L + + K L+D+ ++ L Sbjct: 188 DI--MDNSETRRGSLCWYRQ--NGIGLSAINDGLILENAVYTLLKMHLRDHPAYVPIIEL 243 Query: 151 THNIGLQGMLGGQMLD---------IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 H + LG Q LD + E ++ I K KT A F M Sbjct: 244 FHETVSKTTLG-QCLDSMCLDSDGKPKLEMFSMSRYTSIVKYKT-AYYSFHMPVAVAMYL 301 Query: 202 ASQNEKERLRCFGE---NLGIIFQLADDLLDC 230 A N+ E+ R +G FQ+ DD LDC Sbjct: 302 AGMNDPEQHRQAKTILLEMGEFFQIQDDFLDC 333 >gi|47229030|emb|CAG09545.1| unnamed protein product [Tetraodon nigroviridis] Length = 299 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 20/193 (10%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L NV + E +H SL+ DD+ D+ Sbjct: 13 LLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIRVTEMLHNASLLIDDIE--DS 70 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 71 SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPEAVRVFTRQLLELHR----- 125 Query: 158 GMLGGQMLDI--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GQ LDI +D + E + + KTG L A +M S + K+ L+ Sbjct: 126 ----GQGLDIHWRDTYTCPTEQEYRNMVLQKTGGLFGLAV---GLMQLFS-DWKQDLKPL 177 Query: 214 GENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 178 LDTLGLFFQIRDD 190 >gi|58271236|ref|XP_572774.1| farnesyltranstransferase [Cryptococcus neoformans var. neoformans JEC21] gi|134114510|ref|XP_774085.1| hypothetical protein CNBH0100 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256717|gb|EAL19438.1| hypothetical protein CNBH0100 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229033|gb|AAW45467.1| farnesyltranstransferase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 322 Score = 39.3 bits (90), Expect = 0.41, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IRS L+ V+ + + +H SL+ DD+ DN +RRG P H Sbjct: 35 GKEIRSKLIDAFNQWLEVDKDDLKVITKVVRMLHNASLLMDDVE--DNSELRRGLPVAHT 92 Query: 110 QYDEVTAIIAGNGLLTYAFE 129 Y I A N + AF+ Sbjct: 93 IYGVPQTINAANYVYFLAFQ 112 >gi|70992035|ref|XP_750866.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293] gi|66848499|gb|EAL88828.1| geranylgeranyl diphosphate synthase, putative [Aspergillus fumigatus Af293] Length = 787 Score = 39.3 bits (90), Expect = 0.42, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + K +RS ++ V+ + ++ ++ +H SLI DD+ DN RRG+P Sbjct: 496 MPSKGVRSRMIEAFNYWLEVDETSLTKIRRLVDLLHNASLILDDI--EDNSPKRRGRPAT 553 Query: 108 HIQYDEVTAIIAGNGLLTYAFEI 130 H + AI + N + A ++ Sbjct: 554 HTIFGHSQAINSANFMFVQAVQV 576 >gi|294815586|ref|ZP_06774229.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|294328185|gb|EFG09828.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] Length = 442 Score = 39.3 bits (90), Expect = 0.42, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Query: 43 IRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +R + GK++R+ + A + + + +R AA+E +H +++HDDL +D+ Sbjct: 114 LRAVVARGKRLRAAFCYWGWRAAGRDDTDDI--VRAAAAMELVHAAAVVHDDL--IDHSA 169 Query: 100 IRRGKPTVH 108 +R G PT H Sbjct: 170 VRHGSPTAH 178 >gi|119493680|ref|XP_001263940.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] gi|119412101|gb|EAW22043.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] Length = 294 Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 21/173 (12%) Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA-- 127 ++A + + +H SL+ DD+ D+ +RRG P H + I + N +A Sbjct: 96 ISAFVIKRVVGLLHSASLLIDDI--QDSSKLRRGFPVAHSIFGVAQTINSANFAYFFAQQ 153 Query: 128 -FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--K 184 + + P+ + I ++ ML L G+ L +D I T+ ++ + K Sbjct: 154 ELQKLGKPEALV---IFTEEMLRLHRGQGMD-------LYWRDSLICPTEEEYLEMVANK 203 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 TG L A + +M SQN K+ + + LGIIFQ+ DD + + DL K Sbjct: 204 TGGLFRLAIK---LMQMESQNTKDCVPLV-DLLGIIFQIRDDYQNLQSDLYAK 252 >gi|238589678|ref|XP_002392090.1| hypothetical protein MPER_08383 [Moniliophthora perniciosa FA553] gi|215457662|gb|EEB93020.1| hypothetical protein MPER_08383 [Moniliophthora perniciosa FA553] Length = 153 Score = 39.3 bits (90), Expect = 0.44, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 183 MKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDCE 231 MKT +LM + + ++ E +E +G NLGI FQL DD+LD E Sbjct: 1 MKTASLMAKGARAATCLGGCTEGELYREIAYAYGRNLGIAFQLVDDVLDYE 51 >gi|159124434|gb|EDP49552.1| geranylgeranyl diphosphate synthase, putative [Aspergillus fumigatus A1163] Length = 787 Score = 39.3 bits (90), Expect = 0.44, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + K +RS ++ V+ + ++ ++ +H SLI DD+ DN RRG+P Sbjct: 496 MPSKGVRSRMIEAFNYWLEVDETSLTKIRRLVDLLHNASLILDDI--EDNSPKRRGRPAT 553 Query: 108 HIQYDEVTAIIAGNGLLTYAFEI 130 H + AI + N + A ++ Sbjct: 554 HTIFGHSQAINSANFMFVQAVQV 576 >gi|316969473|gb|EFV53567.1| polyprenyl synthetase superfamily [Trichinella spiralis] Length = 683 Score = 39.3 bits (90), Expect = 0.44, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 8/68 (11%) Query: 49 GGKKIRSFLVT---ECASLFNVNHLTALR---VGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK IR L+T E LF+ A + + +A+E +H LI DD+ MDN RR Sbjct: 502 GGKGIRGRLLTGALEANVLFDDRTSLAQKAHTIASAVEMLHAGFLIQDDI--MDNASTRR 559 Query: 103 GKPTVHIQ 110 GKP + Q Sbjct: 560 GKPCWYRQ 567 >gi|158286274|ref|XP_308653.4| AGAP007104-PA [Anopheles gambiae str. PEST] gi|157020390|gb|EAA04004.4| AGAP007104-PA [Anopheles gambiae str. PEST] Length = 443 Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust. Identities = 52/228 (22%), Positives = 84/228 (36%), Gaps = 23/228 (10%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLT 71 ++ DL + + + + A++Y + GKK R ++ L N Sbjct: 118 VVRDLTAYASKYDKNVATKWFVKALQYNVPQGKKNRGLACVLAYRMLARSEDLTPENIRR 177 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A +G AIE +H LI DD+ MD RRG+P H D+V + ++ A I Sbjct: 178 AQYLGWAIEMLHSMFLIMDDV--MDGSVTRRGQPCWHT-LDDVKLSGVNDAIMIEA-AIA 233 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM------LDIQDEFIDETQVFMIQKMKT 185 K Q + +L L + + +G + LD+ D +D + + K Sbjct: 234 HLVKIQYGNEPYYPRLLELFNEMKFITTIGQSLDLRSAKLDVTDYSMDLYKSIVFHKT-- 291 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDC 230 A F M + E R +G +Q DD DC Sbjct: 292 -AYYTFYLPVAMAMHLTGYTDPEMFRQAKTILLEIGQFYQTQDDFFDC 338 >gi|296424384|ref|XP_002841728.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637976|emb|CAZ85919.1| unnamed protein product [Tuber melanosporum] Length = 343 Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 13/185 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR +T S V ++ + + +H SL+ DD+ N +RRG P H Sbjct: 72 GKDIRQQSITAFNSWLQVPEVSLQIITKVVAMLHNASLLVDDVEDRSN--LRRGFPVAHS 129 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I + N + A + + L I ++ +L+L G+ + + Sbjct: 130 IFGVAQTINSANYVYFQALQELLKLNNPLVLRIYTEELLNLHRGQGMDLFWRDTLTTPTE 189 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D++++ M+ KTG L A + +M S ++K+ + +G++FQ+ DD L Sbjct: 190 DDYLE-----MVSN-KTGGLFRLAVK---LMQAESASDKDYVPLVNI-IGLLFQILDDYL 239 Query: 229 DCEED 233 + + + Sbjct: 240 NLQSN 244 >gi|222619102|gb|EEE55234.1| hypothetical protein OsJ_03111 [Oryza sativa Japonica Group] Length = 358 Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 27/206 (13%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLT---------ALRVGAAIECIHCYSLIHDDLPSM 95 Y +LGGK R V E + T A +G IE + Y L+ DD+ M Sbjct: 55 YNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVLDDI--M 112 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN RRGKP + +V I +GL+ + +I + + +L L + + Sbjct: 113 DNSQTRRGKPC-WFRLPKVGLIAINDGLVLRS-QISRIFRRYFRGKSYYVDLLDLFNEVE 170 Query: 156 LQGMLGGQMLD-------IQDEFIDETQVF-MIQKMKTGALMCF---ACESGAIMAHASQ 204 +Q GQ+LD +D V+ I + KT + AC ++ S Sbjct: 171 IQTT-SGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVAC--ALLLFDESL 227 Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230 + +++ +G+ FQ DD LDC Sbjct: 228 DNYAQVKHILVEMGVYFQSQDDYLDC 253 >gi|254392222|ref|ZP_05007408.1| geranylgeranyl pyrophosphate synthase [Streptomyces clavuligerus ATCC 27064] gi|326443937|ref|ZP_08218671.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064] gi|197705895|gb|EDY51707.1| geranylgeranyl pyrophosphate synthase [Streptomyces clavuligerus ATCC 27064] Length = 439 Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Query: 43 IRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 +R + GK++R+ + A + + + +R AA+E +H +++HDDL +D+ Sbjct: 111 LRAVVARGKRLRAAFCYWGWRAAGRDDTDDI--VRAAAAMELVHAAAVVHDDL--IDHSA 166 Query: 100 IRRGKPTVH 108 +R G PT H Sbjct: 167 VRHGSPTAH 175 >gi|13537421|dbj|BAB40665.1| farnesyl pyrophosphate synthase [Humulus lupulus] gi|13537423|dbj|BAB40666.1| farnesyl pyrophophate synthase [Humulus lupulus] Length = 342 Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 98/249 (39%), Gaps = 36/249 (14%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQT----QHNDRLLSAIRYALLGGKKIRSFLVT 59 GL SK E + +IL LL + T Q +R+L Y + GGK R V Sbjct: 3 GLRSKFME----VYSILKSELLNDPAFEFTDDSRQWVERMLD---YNVPGGKLNRGLSVI 55 Query: 60 ECASLFNV-NHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112 + L LT + G IE + Y L+ DD+ MDN RRG+P + Sbjct: 56 DSYQLLKGGKELTEEEIFLTSALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPC-WFRVP 112 Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172 +V I A +G+L I K K +L L + + Q GQM+D+ Sbjct: 113 KVGLIAANDGILLRN-HIPRILKKHFKGKSYYVDLLDLFNEVEFQTA-SGQMIDLITTIE 170 Query: 173 DETQV--------FMIQKMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIF 221 E + I + KT + AC +MA + + ++ +G F Sbjct: 171 GEKDLSKYSIPLHHRIVQYKTAYYSFYLPVAC--ALVMAGENLDNHVDVKNVLIEMGTYF 228 Query: 222 QLADDLLDC 230 Q+ DD LDC Sbjct: 229 QVQDDYLDC 237 >gi|269794899|ref|YP_003314354.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM 10542] gi|269097084|gb|ACZ21520.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM 10542] Length = 369 Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 7/80 (8%) Query: 37 DRLLSAIRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 D L A L GGK++R+ + + + VGAA+E +L HDD Sbjct: 41 DPLADAWSQMLRGGKRLRAAFAYWSWRAHGGAPGGAEAASIVGVGAALELFQAAALFHDD 100 Query: 92 LPSMDNGYIRRGKPTVHIQY 111 + MD RRG PT H + Sbjct: 101 V--MDRSDTRRGVPTAHRTF 118 >gi|312381025|gb|EFR26873.1| hypothetical protein AND_06760 [Anopheles darlingi] Length = 479 Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 83/212 (39%), Gaps = 25/212 (11%) Query: 39 LLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 + A++Y + GKK R ++ + L N A +G IE +H L+ DD Sbjct: 174 FVRALQYNVPQGKKNRGLASVLAYRMLAKHEDLTPENIRRAQYLGWCIEMLHSMFLMIDD 233 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEIISSPKTQLKDNIRSQLMLS 149 + MD +RRG+P H D+V + +G++ A F +I K + +L Sbjct: 234 I--MDGSAMRRGQPAWHT-LDDVKMVAINDGIMIDAAIFYVI---KKHFGNEPYYARLLE 287 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQ 204 I +G Q LD+ +D TQ M I KT A F M Sbjct: 288 EFSEIKFITTIG-QSLDLLSAKMDVTQYTMDVYKSIVFHKT-AYYTFYLPVAMAMHMTGY 345 Query: 205 NEKERLRCFGE---NLGIIFQLADDLLDCEED 233 + E R +G +Q DD LDC D Sbjct: 346 TDPEMFRQAKTILLEIGQFYQAQDDFLDCFGD 377 >gi|317138018|ref|XP_001816605.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40] Length = 364 Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust. Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 31/200 (15%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L GK ++ N++ +A + + + SL+ DD+ D +RRG P Sbjct: 75 LPGKNTVGKVIESLRPWLNISDRSAAVLTDVMTMLQNSSLMLDDIE--DGSQLRRGAPAA 132 Query: 108 HIQY------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG--LQGM 159 H++Y + T IIA +++S +T L+ + +LS+ + LQ + Sbjct: 133 HVKYGLSQTINSTTYIIA---------KVVSEVQTHLR--LECAKVLSVLRKLAEELQTL 181 Query: 160 LGGQMLDIQDEF------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GQ LD+ F ++E V + KTG I A+A+ N++ LR Sbjct: 182 TLGQALDLNWTFNKTCPSVNEYLVMI--DHKTGGFFRLMLRIMEIEANATPNDE--LRHL 237 Query: 214 GENLGIIFQLADDLLDCEED 233 LG +Q+ DD + D Sbjct: 238 ITLLGRYYQIRDDYQNIASD 257 >gi|22676905|gb|AAM98379.1| farnesyl diphosphate synthase [Hevea brasiliensis] gi|34013692|gb|AAQ56011.1| farnesyl diphosphate synthase [Hevea brasiliensis] Length = 342 Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 98/241 (40%), Gaps = 38/241 (15%) Query: 15 RIDTILDDLLLQTASHMQT----QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH- 69 ++ ++L LL+ + T Q +R+L Y + GGK R V + L Sbjct: 10 KVYSVLKQELLEDPAFEWTPDSRQWVERMLD---YNVPGGKLNRGLSVIDSYKLLKEGQE 66 Query: 70 ------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A +G IE + Y L+ DD+ MD+ + RRG+P + +V I A +G+ Sbjct: 67 LTEEEIFLASALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPC-WFRVPKVGLIAANDGI 123 Query: 124 LTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 L P+ LK + R + +L L + + Q GQM+D+ E + Sbjct: 124 LLRN----HIPRI-LKKHFRGKAYYVDLLDLFNEVEFQTA-SGQMIDLITTLEGEKDLSK 177 Query: 180 --------IQKMKTGALMCFACESGAIMAHASQNEKERL--RCFGENLGIIFQLADDLLD 229 I + KT A F + A +N + + +GI FQ+ DD LD Sbjct: 178 YTLSLHRRIVQYKT-AYYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLD 236 Query: 230 C 230 C Sbjct: 237 C 237 >gi|327262083|ref|XP_003215855.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Anolis carolinensis] Length = 300 Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 79/200 (39%), Gaps = 34/200 (17%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL Y L L GK++R+ L NV + E +H SL+ DD+ DN Sbjct: 12 LLEPYHYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH----- 152 +RRG P H Y + I N + Q +L+L H Sbjct: 70 SKLRRGFPVAHSIYGIPSVINCANFIYFLGL----------------QKVLTLDHPDAVK 113 Query: 153 --NIGLQGMLGGQMLDI--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + L + GQ LDI +D + E++ + KTG L A +M S N Sbjct: 114 VFTLQLLELHKGQGLDIYWRDNYTCPTESEYKAMVLQKTGGLFGLAV---GLMQLFS-NY 169 Query: 207 KERLRCFGENLGIIFQLADD 226 K+ L+ LG+ FQ+ DD Sbjct: 170 KKDLKPLLNTLGLFFQIRDD 189 >gi|168031541|ref|XP_001768279.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680457|gb|EDQ66893.1| predicted protein [Physcomitrella patens subsp. patens] Length = 360 Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 78/204 (38%), Gaps = 24/204 (11%) Query: 45 YALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDN 97 Y + GGK R V L + A +G IE + Y L+ DD+ MDN Sbjct: 58 YTVPGGKLNRGLSVVHSLELLKKDTPLSEQDTFNACALGWCIEWLQGYFLVMDDI--MDN 115 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG+P + + +V I +G++ I K + + ++ L +++ Q Sbjct: 116 SVTRRGQPCWY-RVPKVGLIAINDGIILRT-HISRVLKRHFRQSPIYVELVDLFNDVEYQ 173 Query: 158 GMLGGQMLDIQDEFIDETQV--------FMIQKMKTGALMCFACESGAIMAHASQNEKER 209 GQMLD+ E + I K KT A F + A + + Sbjct: 174 TA-SGQMLDLITTPAGEVDLSKYVLPTYLRIVKYKT-AYYSFYLPVACALLLAGETSVAK 231 Query: 210 LRCFGE---NLGIIFQLADDLLDC 230 E +G FQ+ DD LDC Sbjct: 232 FEAAKEVLVQMGTYFQVQDDYLDC 255 >gi|218188900|gb|EEC71327.1| hypothetical protein OsI_03373 [Oryza sativa Indica Group] Length = 356 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 86/218 (39%), Gaps = 39/218 (17%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLT---------ALRVGAAIECIHCYSLIH 89 L S + Y +LGGK R V E + T A +G IE + Y L+ Sbjct: 47 LESMLDYNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVL 106 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--- 146 DD+ MDN RRGKP + +V I +GL+ ++Q+ R Sbjct: 107 DDI--MDNSQTRRGKPC-WFRLPKVGLIAINDGLVL---------RSQISRIFRRYFCGK 154 Query: 147 -----MLSLTHNIGLQGMLGGQMLD-------IQDEFIDETQVF-MIQKMKTGALMCFAC 193 +L L + + Q GQ+LD +D V+ I + KT + Sbjct: 155 SYYVDLLDLFNEVEFQTT-SGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLP 213 Query: 194 ESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDC 230 + A++ S + +++ +G+ FQ DD LDC Sbjct: 214 VACALLLFGESLDNYAQVKHILVEMGVYFQSQDDYLDC 251 >gi|149032543|gb|EDL87421.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Rattus norvegicus] Length = 267 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ D+ Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++QK TG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDTYTCPTEEEYKAMVLQK--TGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 175 PLLDTLGLFFQIRDD 189 >gi|267847005|gb|ACY80695.1| farnesyl pyrophosphate synthase [Cyclocarya paliurus] Length = 342 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 23/203 (11%) Query: 45 YALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 Y + GGK R L+ E L N A +G IE + Y L+ DD+ MDN Sbjct: 41 YNVPGGKLNRGLSVIDSYKLLKEGKELTNDEIFLACALGWCIEWLQAYFLVLDDI--MDN 98 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG+P + +V I +G++ I K ++ +L L + + Q Sbjct: 99 SVTRRGQPC-WFRLPKVGMIAVNDGIILRN-HIPRILKNHFREKNYYVDLLDLFNEVEFQ 156 Query: 158 GMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCFACESGAIMAHASQNEKER 209 GQM+D+ + E + I + KT A F + A +N + Sbjct: 157 TA-SGQMIDLITTLVGEKDLSKYSLSLHQRIVQYKT-AYYSFYLPVACALLMAGENLENH 214 Query: 210 L--RCFGENLGIIFQLADDLLDC 230 + + +G FQ+ DD LDC Sbjct: 215 INVKNILIEMGNYFQVQDDYLDC 237 >gi|119964435|ref|YP_947457.1| polyprenyl synthetase [Arthrobacter aurescens TC1] gi|119951294|gb|ABM10205.1| putative polyprenyl synthetase [Arthrobacter aurescens TC1] Length = 364 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 48/162 (29%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-----LRVGAAIECIHCYSLIHDDLP 93 L+ +I + GGK++R+ + C + A + G A+E +LIHDD+ Sbjct: 43 LIGSISNLVTGGKRLRALM---CYWGWRGAGGPAGDPDIITAGCALELFQAAALIHDDI- 98 Query: 94 SMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIIS----- 132 +D RRG P+VH +++++ AI+ G+ L+++ E + Sbjct: 99 -IDRSDTRRGGPSVHKRFNQLHEMNGWALDSGRFGDAAAILTGDLCLSFSEESFTEIGHR 157 Query: 133 ----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170 SP ++ + +R+++M GQ LDI +E Sbjct: 158 AAAGSPARRIFNVMRAEVM-------------AGQYLDILEE 186 >gi|171185989|ref|YP_001794908.1| polyprenyl synthetase [Thermoproteus neutrophilus V24Sta] gi|170935201|gb|ACB40462.1| Polyprenyl synthetase [Thermoproteus neutrophilus V24Sta] Length = 263 Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%) Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 +V L ++ A +E +H SL+ DD+ MD RRG T Y + +I+A + L+ Sbjct: 62 SVLDLRIIQAAAIVELLHVVSLLQDDV--MDKHDERRGAKTPRALYGDGRSIVASDWLIA 119 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 + + QL +I + + + + + GQ LD+ + DE F + Sbjct: 120 ESIK----RALQLGPDI-VKYLADVAQRLSI-----GQALDLDGRY-DEAAEFKTAPLIE 168 Query: 186 GALMCFACESG--AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +L+ A G I+ A + G+ LG+++Q ADD D Sbjct: 169 ASLVLPAMLLGRREILDSAKK--------LGQLLGVLYQYADDYSD 206 >gi|157418928|gb|ABV55169.1| quorum-sensing protein [Bacillus subtilis] gi|157418932|gb|ABV55171.1| quorum-sensing protein [Bacillus subtilis] Length = 287 Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + + IE + + I DD+ DN ++ D A A L T + ++I S Sbjct: 52 LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 K +LSLT LQ L GQ +D+ E++ + K+K+G+L+ Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 G +A N E + + LG++ Q+A+D Sbjct: 158 LGVYLATGECN--ETVEEYSRYLGVVEQIAND 187 >gi|14422406|dbj|BAB60822.1| putative FPP synthase 2 [Eucommia ulmoides] Length = 342 Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 26/210 (12%) Query: 45 YALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDN 97 Y + GGK R V + L A +G IE + Y L+ DD+ MD+ Sbjct: 41 YNVPGGKLNRGLSVIDSFKLLKEGKEPTDEEIFLACVLGWCIEWLQAYFLVLDDI--MDS 98 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 + RRG+P + +V I +GL+ I K K +L L + + Q Sbjct: 99 SHTRRGQPC-WFRLPKVGMIAVNDGLILRN-HIPRILKKHFKGKPYYVDLLDLFNEVEFQ 156 Query: 158 GMLGGQMLDIQDEFIDETQV--------FMIQKMKTGALMCF---ACESGAIMAHASQNE 206 GQM+D+ + E + I + KT + AC +M+ + + Sbjct: 157 TA-SGQMIDLITTLVGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVAC--ALVMSGENLDN 213 Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++ +G FQ+ DD LDC D PK Sbjct: 214 HVDVKNILVEMGTYFQVQDDYLDCFGD-PK 242 >gi|296813323|ref|XP_002846999.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS 113480] gi|238842255|gb|EEQ31917.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS 113480] Length = 345 Score = 38.9 bits (89), Expect = 0.53, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 14/179 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+ R+ L++ V+ + + I +H SL+ DD+ DN +RRG+P H Sbjct: 67 GKEFRTQLLSAFNVWLKVSPDSLQCISGVIRMLHNASLLVDDI--QDNSRLRRGRPVAHS 124 Query: 110 QYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-LDI 167 + I + N + A E+ P ++ I + MLSL G+ + Sbjct: 125 VFGVAQTINSANFVYFLALAELQKLPHSKEAMEIFTAEMLSLHRGQGMDLFWRDTLSCPS 184 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 +D++++ M+ KTG L A + + A K LG+IFQ+ DD Sbjct: 185 EDDYLE-----MVSN-KTGGLFRLAIK----LMQAECETKVDCMPLVNLLGLIFQITDD 233 >gi|295401745|ref|ZP_06811711.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|294976232|gb|EFG51844.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93] Length = 310 Score = 38.9 bits (89), Expect = 0.54, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 11/154 (7%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R+ AA+E + I DDL D+ K + + ++ I Sbjct: 69 RIAAAVELLMLAGDILDDLMDQDSLETSWSKAPLTTSFHMAIGLLLAGQKAIADLPIDDD 128 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 K + + I S+L+ SL GQ +D+ + ET + K K+G+L+ AC Sbjct: 129 KKAKAQSYILSRLLQSL----------NGQHMDVTNGIQTETDYLQMLKKKSGSLVAMAC 178 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 G +A A +N + + ++GI Q+ +D+ Sbjct: 179 FVGTALAGAEKN-TVIIEKYANDIGIAAQIDNDI 211 >gi|56090562|ref|NP_001007627.1| geranylgeranyl pyrophosphate synthase [Rattus norvegicus] gi|81891588|sp|Q6F596|GGPPS_RAT RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|50428383|dbj|BAD30051.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus] gi|50428385|dbj|BAD30052.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus] gi|50428387|dbj|BAD30053.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus] gi|50428389|dbj|BAD30054.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus] gi|59861856|gb|AAH90327.1| Geranylgeranyl diphosphate synthase 1 [Rattus norvegicus] Length = 300 Score = 38.9 bits (89), Expect = 0.56, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ D+ Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + + + ++ +L L Sbjct: 70 SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++QK TG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDTYTCPTEEEYKAMVLQK--TGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 + LG+ FQ+ DD Sbjct: 175 PLLDTLGLFFQIRDD 189 >gi|205363969|gb|ACI04497.1| CrtE [uncultured bacterium] Length = 351 Score = 38.9 bits (89), Expect = 0.56, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 18/158 (11%) Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E +H SLI DD+ D RRG P +H + A+ AGN L +A+ ++ Sbjct: 88 VEVLHAGSLIVDDI--QDESEERRGGPALHQIHGVPLALNAGNWLYFWAYALLGEIDLPD 145 Query: 139 KDNIRSQLMLSLTHNIGLQGML---GGQMLDIQDEFIDETQVFMIQK------MKTGALM 189 + +R+ H + + +L GQ LD+ D Q + +KTG+L+ Sbjct: 146 EAAVRA-------HRLVTRALLDCHAGQGLDLSVRMSDVAQAAVPAVVRASTLLKTGSLL 198 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 A GA++ A+ + FG++LG Q+ DDL Sbjct: 199 GLAAGLGALVGGATADAIAASARFGQDLGTGLQMLDDL 236 >gi|196004414|ref|XP_002112074.1| hypothetical protein TRIADDRAFT_24460 [Trichoplax adhaerens] gi|190585973|gb|EDV26041.1| hypothetical protein TRIADDRAFT_24460 [Trichoplax adhaerens] Length = 286 Score = 38.9 bits (89), Expect = 0.56, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 11/179 (6%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + GK+IR L+ + + + + ++ +H SL+ DD+ DN +RRG P Sbjct: 10 IPGKEIRVKLIQAFNNWLQIPEDKLAAISSVVQMLHNASLLIDDIE--DNSKLRRGVPVA 67 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H + I A N + A I S I ++ ML L GL + D Sbjct: 68 HQIFGLAQTINAANYVYFKAMHEILSLNHPDGVKIFTEEMLELHQGQGLDILWR----DS 123 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + +E M+ K KTG L A +M S+N K L + FQ+ DD Sbjct: 124 HNCPSEEEYKMMVNK-KTGGLFRLAVN---LMQLFSEN-KRNFTPLLNYLSLFFQIGDD 177 >gi|115439359|ref|NP_001043959.1| Os01g0695300 [Oryza sativa Japonica Group] gi|56785155|dbj|BAD81810.1| putative farnesyl-pyrophosphate synthetase fps2 [Oryza sativa Japonica Group] gi|113533490|dbj|BAF05873.1| Os01g0695300 [Oryza sativa Japonica Group] Length = 307 Score = 38.9 bits (89), Expect = 0.58, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 27/206 (13%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLT---------ALRVGAAIECIHCYSLIHDDLPSM 95 Y +LGGK R V E + T A +G IE + Y L+ DD+ M Sbjct: 4 YNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVLDDI--M 61 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN RRGKP + +V I +GL+ + +I + + +L L + + Sbjct: 62 DNSQTRRGKPC-WFRLPKVGLIAINDGLVLRS-QISRIFRRYFRGKSYYVDLLDLFNEVE 119 Query: 156 LQGMLGGQMLD-------IQDEFIDETQVF-MIQKMKTGALMCF---ACESGAIMAHASQ 204 +Q GQ+LD +D V+ I + KT + AC ++ S Sbjct: 120 IQTT-SGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVAC--ALLLFDESL 176 Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230 + +++ +G+ FQ DD LDC Sbjct: 177 DNYAQVKHILVEMGVYFQSQDDYLDC 202 >gi|303391601|ref|XP_003074030.1| farnesyl pyrophosphate synthetase [Encephalitozoon intestinalis ATCC 50506] gi|303303179|gb|ADM12670.1| farnesyl pyrophosphate synthetase [Encephalitozoon intestinalis ATCC 50506] Length = 292 Score = 38.9 bits (89), Expect = 0.59, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 26/219 (11%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN--VNHLTAL 73 I I+ +LQ + + + +L + Y L GGK++R + N +N L Sbjct: 2 IKEIVKRKVLQLSDYY---NKSEILFLLDYNLEGGKELRYKAYIHVLNALNGEMNE-KNL 57 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 VG IE + LI DDL MDN +RR KP +++ G ++ AF ++ Sbjct: 58 TVGYTIELLQAALLITDDL--MDNSEVRREKPCYYLK--------RGTKVIKDAFFLLGV 107 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + + ++ S+ G + + E+ E I + KTGA + Sbjct: 108 IRKMIDKRMKRPYSYSIFKTC--IGQTHDTIRKTRAEYNIEAYT-AIAESKTGAYTFYL- 163 Query: 194 ESGAIMAH--ASQNEKERLRCFGENLG-IIFQLADDLLD 229 AI + A + E E L F NLG +IFQ+ DD L+ Sbjct: 164 --PAIFGYISAKKKEPEYLWDFC-NLGALIFQMQDDYLN 199 >gi|296230923|ref|XP_002760938.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1 [Callithrix jacchus] gi|296230925|ref|XP_002760939.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2 [Callithrix jacchus] Length = 300 Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 82/202 (40%), Gaps = 38/202 (18%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + E + L+L H ++ Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKV----------------LTLDHPDAVK 113 Query: 158 -------GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 + GQ LDI +D + +E + ++Q KTG L A +M S Sbjct: 114 LFTCQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS- 167 Query: 205 NEKERLRCFGENLGIIFQLADD 226 + KE L+ LG+ FQ+ DD Sbjct: 168 DYKEDLKPLLNTLGLFFQIRDD 189 >gi|213402169|ref|XP_002171857.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus yFS275] gi|211999904|gb|EEB05564.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus yFS275] Length = 341 Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust. Identities = 56/234 (23%), Positives = 87/234 (37%), Gaps = 26/234 (11%) Query: 19 ILDDLLLQTASHMQTQH--NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71 I+ D L Q+ S + + +L I +GGK R V E + LT Sbjct: 11 IILDTLTQSLSKLNCPEGLKENVLHTITQNTIGGKGTRGKAVLESVKVLLGTELTDDMHE 70 Query: 72 -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + +G +E + L+ DD+ MD RRG+P ++Q A + F + Sbjct: 71 KSCLLGWIVEMLQGSFLVADDI--MDKSLTRRGRPCWYLQVGTSRAFTEAVMMENLVFVL 128 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--------LDIQDEFIDETQVFMIQK 182 + + +D + +L H I LQ G +M + + F + F++ Sbjct: 129 L---RLFFRDQPYYKELLDTFHEILLQTETGQEMDLILSIGGVPMNTSFSLKAYEFIVT- 184 Query: 183 MKTGALMCFACESGAIMAHASQNEKERL---RCFGENLGIIFQLADDLLDCEED 233 KT A F M EK+ + LG FQ DD LDC D Sbjct: 185 YKT-AYYSFYLPIKCAMILVGMKEKQAYVDAKRLAVQLGRYFQFQDDFLDCYGD 237 >gi|229820403|ref|YP_002881929.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333] gi|229566316|gb|ACQ80167.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333] Length = 362 Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 10/66 (15%) Query: 49 GGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GGK++R+ L CA+ + GAA+E +L+HDD+ MD +RR Sbjct: 49 GGKRLRALLC--CAAWEAAGGAVPSAGDPVVLAGAALELFQAAALVHDDV--MDASDVRR 104 Query: 103 GKPTVH 108 G P H Sbjct: 105 GAPAAH 110 >gi|215480263|gb|ACJ67476.1| quorum sensing protein [Bacillus subtilis] Length = 252 Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + + IE + + I DD+ DN ++ D A A L T + ++I S Sbjct: 52 LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 K +LSLT LQ L GQ +D+ E++ + K+K+G+L+ Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 G +A N E + + LG++ Q+A+D Sbjct: 158 LGVYLATGECN--ETVEEYSRYLGVVEQIAND 187 >gi|21955860|emb|CAD42869.1| farnesyl pyrophosphate synthase [Mucor circinelloides f. lusitanicus] Length = 352 Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust. Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 36/250 (14%) Query: 8 KLQENSKR------IDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 KLQ+ R T+ D++LL+ + M + + Y + GGK R V + Sbjct: 5 KLQKEENRQAFLKVFPTLADEVLLELRKYNMPEDAYEWTKKMLYYNVPGGKLNRGISVVD 64 Query: 61 CASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 + + +T A +G IE + + L+ DD+ MD RRG+P + E Sbjct: 65 TVRILKGDAVTEDDIFKATVLGWLIEFLQAFFLVSDDI--MDASITRRGQPCWYKS--EG 120 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174 ++A N I K K ++ L H + Q LG Q+ D+ D+ Sbjct: 121 VGMVAINDAFILESCIYIFLKKYFKKTDYYIELVELFHEVTFQTELG-QLCDLITAPEDD 179 Query: 175 TQV--FMIQK------MKTGALMCFACESGAIMAHASQNEKERLRCFGEN------LGII 220 + F I+K KT + + A+ +NE+ F ++ LG Sbjct: 180 VDLSKFSIKKHQFIVIYKTAYYSFYLPVALAMHMVGIKNEE----AFKQSHDILIPLGEY 235 Query: 221 FQLADDLLDC 230 FQ+ DD LDC Sbjct: 236 FQVQDDYLDC 245 >gi|73952570|ref|XP_536340.2| PREDICTED: similar to geranylgeranyl diphosphate synthase 1 [Canis familiaris] Length = 300 Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 24/195 (12%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 LL +Y L L GK++R+ L V + E +H SL+ DD+ DN Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H Y + I + N + + + + + + +L L Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLQKVLTLDHPDAVKLFTHQLLELHQ----- 124 Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 GQ LDI +D + +E + ++Q KTG L A +M S + KE L+ Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174 Query: 212 CFGENLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 175 PLLNTLGLFFQIRDD 189 >gi|168070550|ref|XP_001786852.1| predicted protein [Physcomitrella patens subsp. patens] gi|162660326|gb|EDQ48334.1| predicted protein [Physcomitrella patens subsp. patens] Length = 367 Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR LV + + + A+E +H +L+HDDL +D+ RRGK Sbjct: 290 GGKRIRPRLVFLASRALGGAPFE-MELALAVELLHSATLLHDDL--IDDAETRRGKEAAF 346 Query: 109 IQYDEVTAIIAG 120 +Y ++++G Sbjct: 347 RKYGNAVSVLSG 358 >gi|78191049|gb|ABB29849.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana sanderae] Length = 234 Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 22/175 (12%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A +G IE + Y L+ DD+ MDN + RRG+P + + +V I +G+L + Sbjct: 2 ASALGRCIEWLQAYFLVLDDI--MDNSHTRRGQPCWY-KLPKVGMIAVNDGIL-----LR 53 Query: 132 SSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDE---------TQVF 178 LK++ R++ +L L + + Q GQM+D+ + E T Sbjct: 54 DHITRILKNHFRAKPYYVDLLDLFNEVEFQTA-SGQMVDLITTLVGEKDLSKYSLPTHRR 112 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++Q +MA + ++ ++ +GI Q+ DD LDC D Sbjct: 113 IVQYKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYSQVQDDYLDCFAD 167 >gi|215480273|gb|ACJ67481.1| quorum sensing protein [Bacillus subtilis] Length = 258 Score = 38.5 bits (88), Expect = 0.69, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + + IE + + I DD+ DN ++ D A A L T + ++I S Sbjct: 52 LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 K +LSLT LQ L GQ +D+ E++ + K+K+G+L+ Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 G +A N E + + LG++ Q+A+D Sbjct: 158 LGVYLATGECN--ETVEEYSRYLGVVEQIAND 187 >gi|212530618|ref|XP_002145466.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium marneffei ATCC 18224] gi|210074864|gb|EEA28951.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium marneffei ATCC 18224] Length = 297 Score = 38.5 bits (88), Expect = 0.71, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 +LS +Y L KK+R + + F+V + I+ +H SL+ DD+ D+ Sbjct: 104 ILSPSQYVKSLPSKKVRHHAIDALSIWFDVPEAELSVMKDTIDTLHNSSLMLDDIE--DD 161 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 +RRG P+ H+ + I A N L A E+ Sbjct: 162 SPLRRGFPSTHVVFGISQTINAANYLYVIALEM 194 >gi|66815945|ref|XP_641989.1| hypothetical protein DDB_G0278823 [Dictyostelium discoideum AX4] gi|74856499|sp|Q54XP1|Y8823_DICDI RecName: Full=Probable farnesyl diphosphate synthase DDB_G0278823; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|60470032|gb|EAL68013.1| hypothetical protein DDB_G0278823 [Dictyostelium discoideum AX4] Length = 356 Score = 38.5 bits (88), Expect = 0.71, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 29/213 (13%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAAIECIHCYSLIHDD 91 + I+ GGK R V E SL ++N AL +G +E L+ DD Sbjct: 45 TVIKANSTGGKMNRGISVLE--SLESLNEGRALTRHEIFQAQTLGWCVEIFQACYLVSDD 102 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----M 147 + MD RRGKP + Q + G + +F I S L+ +++ + Sbjct: 103 I--MDQSLKRRGKPCWYKQKRPNSDQEVGLAAINDSFIIESCVFILLEKYFKNESYYLNI 160 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM-----IQKMKTGALMCFACESGAIMA 200 + L H G Q LG Q+LD+ + I D + + + I + KT A F M Sbjct: 161 VELFHKTGFQTQLG-QLLDLTTQPIRGDFSSINLKNHTRITEYKT-AYYSFFFPVALAML 218 Query: 201 HASQNEKERLRCFGE---NLGIIFQLADDLLDC 230 + N ++ + +G+ FQ+ DD LDC Sbjct: 219 MSKINHEQAFTTAKDILLPMGVYFQVQDDFLDC 251 >gi|134077098|emb|CAK45439.1| unnamed protein product [Aspergillus niger] Length = 360 Score = 38.5 bits (88), Expect = 0.71, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 26/184 (14%) Query: 51 KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110 K R+ L+ + V + + +H SL+ DD+ D+ +RRGKP VH Sbjct: 47 KGFRNHLIDALQEWYKVPQASLAVISGVASLLHEASLMLDDI--QDDSPLRRGKPAVH-- 102 Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLD 166 I G G + I+S + + + +R L LS + ++ + + GQ D Sbjct: 103 ------TIFGVG------QTINSARFHINNALRLCLQLSPSASLIFSDQIAQLFTGQAHD 150 Query: 167 IQ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 +Q E F + K GAL+ S + A+QN L F +G Q Sbjct: 151 LQWARHKSIPTEEDYFRMVDGKNGALLILI--SRLMQNEATQNRTLDLTHFMNLIGRSHQ 208 Query: 223 LADD 226 L DD Sbjct: 209 LRDD 212 >gi|229819467|ref|YP_002880993.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333] gi|229565380|gb|ACQ79231.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333] Length = 366 Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 39/220 (17%) Query: 42 AIRYALLGGKKIRSFLVTECASLF-----------NVNHLTALRVGAAIECIHCYSLIHD 90 A+R A GGK++R LV + + A++V AA E +H L+HD Sbjct: 45 AVREACRGGKRVRPALVLAAFHGLRDDAGPGHEEGDPDGGAAVQVAAAFELLHAAFLLHD 104 Query: 91 DLPSMDNGYIRRGKP--------TVHI---------QYDEVTAIIAGNGLLTYAFEIISS 133 D+ +D +RRG+P H ++ A++AG+ L+ A +++ Sbjct: 105 DV--IDGDLVRRGRPNLIAELAEAAHTDGVGSSPAHEWGTAAAVLAGDVLIHAALHAVAT 162 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALM 189 + R +L L L L + G++ D+ + E V + KT A Sbjct: 163 --ADVPAEPRREL-LELVDRC-LVRTVAGEVADVAYAARVEVPRLPDVLRMTSWKTAAYS 218 Query: 190 CFA-CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 C A +GAI+A A+ + L G +G +QL DD+L Sbjct: 219 CEAPLVAGAILAGAAPGARAALADVGRAVGAAYQLRDDVL 258 >gi|188039903|gb|ACD47128.1| farnesyl pyrophosphate synthetase [Dendrobium huoshanense] Length = 174 Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 18/169 (10%) Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 G IE + Y L+ DD+ MD+ + RRG+P + IIA N + I Sbjct: 1 GWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFVV--PKVGIIAANDGIILRNHIPRILN 56 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-------QDEFIDETQVF-MIQKMKTGA 187 +D +L L + + Q GQMLD+ +D + V+ I + KT Sbjct: 57 RHFRDKTYYVHLLDLFNEVEFQTA-SGQMLDLITTHEGEKDLSKYKMPVYNRIVQYKTAY 115 Query: 188 LMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + AC +MA + + ++ +G FQ+ DD LDC D Sbjct: 116 YSFYLPVAC--ALLMAGETLDNYVDVKRVLVEMGTYFQVQDDYLDCFGD 162 >gi|110590636|pdb|2HER|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Synthase (Cgd4_2550) In Complex With Zoledronate gi|110590637|pdb|2HER|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Synthase (Cgd4_2550) In Complex With Zoledronate gi|122921291|pdb|2O1O|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Synthase (Cgd4_2550) In Complex With Risedronate. gi|122921292|pdb|2O1O|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Synthase (Cgd4_2550) In Complex With Risedronate. gi|149243603|pdb|2Q58|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Synthase (Cgd4_2550) In Complex With Zoledronate gi|149243604|pdb|2Q58|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate Synthase (Cgd4_2550) In Complex With Zoledronate Length = 368 Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 40 LSAIRYALLGGKKIRS---FLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 L+ I Y + GK IR L++ +S + N+ + +G +E I LI DD+ M Sbjct: 61 LNCIDYNVKKGKHIRGKILVLISSLSSAYSNIKRDSIYLLGWVVEAIQALILIADDI--M 118 Query: 96 DNGYIRRGKPTVHIQYDEVTAI 117 D+G RRG P +I + + AI Sbjct: 119 DSGKFRRGAPCWYIVHGQSNAI 140 >gi|215480233|gb|ACJ67461.1| quorum sensing protein [Bacillus subtilis] Length = 268 Score = 38.5 bits (88), Expect = 0.75, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + + IE + + I DD+ DN ++ D A A L T + ++I S Sbjct: 52 LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 K +LSLT LQ L GQ +D+ E++ + K+K+G+L+ Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 G +A N E + + LG++ Q+A+D Sbjct: 158 LGVYLATGECN--ETVEEYSRYLGVVEQIAND 187 >gi|146319410|ref|YP_001199122.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] gi|145690216|gb|ABP90722.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] Length = 164 Score = 38.5 bits (88), Expect = 0.75, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 3/100 (3%) Query: 29 SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSL 87 S M H + Y GK +R+ L A + + L A +E +H +L Sbjct: 25 SEMMVLHPAVTAKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKLYFAAHLEVLHLATL 84 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 IHDD+ +D RRG H Q+ AI G+ LL Y+ Sbjct: 85 IHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYS 122 >gi|94502447|ref|ZP_01308879.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|94450996|gb|EAT13989.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] Length = 137 Score = 38.5 bits (88), Expect = 0.75, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 8/86 (9%) Query: 48 LGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104 + GK IR FL+T+ N++ T + IE IH SLIHDD+ N RRG Sbjct: 49 IKGKYIRPIFVFLITKMLG--NISKKTY-DLAILIELIHTASLIHDDVIDFSNT--RRGF 103 Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEI 130 +++ + TA++ G+ + + +F+I Sbjct: 104 LSINAIWQNKTALVFGDYIFSKSFDI 129 >gi|321312716|ref|YP_004205003.1| isoprenyl-trasferase [Bacillus subtilis BSn5] gi|320018990|gb|ADV93976.1| isoprenyl-trasferase [Bacillus subtilis BSn5] Length = 289 Score = 38.5 bits (88), Expect = 0.76, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 21/165 (12%) Query: 65 FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F+ +TA+ + A+ IE + + I DD+ DN ++ D I A L Sbjct: 41 FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATTL 94 Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 T + ++IS S QL LSLT LQ L GQ D+ + E++ + Sbjct: 95 YTLSLQVISLVSNNPQL---------LSLTLQYSLQS-LQGQHADLNVKISSESEYIEMI 144 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 K+K+G+L+ G +A N E + + LGI+ Q+A+D Sbjct: 145 KLKSGSLVTLPSVLGVYLATGEIN--ETVEEYSLYLGIVEQIAND 187 >gi|162312532|ref|XP_001713103.1| serine palmitoyltransferase Lcb2 (predicted) [Schizosaccharomyces pombe 972h-] gi|1346422|sp|Q09925|LCB2_SCHPO RecName: Full=Serine palmitoyltransferase 2; Short=SPT 2; AltName: Full=Long chain base biosynthesis protein 2 gi|1001947|gb|AAC49534.1| serine palmitoyltransferase [Schizosaccharomyces pombe] gi|159884011|emb|CAA91967.3| serine palmitoyltransferase Lcb2 (predicted) [Schizosaccharomyces pombe] Length = 603 Score = 38.5 bits (88), Expect = 0.77, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 16/159 (10%) Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDN---GYIRRGKPTVHIQYDEVTAIIAGNGL 123 +NH T++R GA + + H+D+ ++ I +G+P H Y ++ +I GL Sbjct: 280 LNH-TSIRFGARLSGANIRVYKHNDMTDLERVLREVISQGQPRTHRPYSKILVVI--EGL 336 Query: 124 LTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 + PK +LK+ + L + H+IG G GG + D D + M Sbjct: 337 YSMEGNFCDLPKVVELKNRYKFYLFIDEAHSIGAIGPRGGGICDYFGISTDHVDILMGTF 396 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 K+ F G I A+ N +LR N G ++ Sbjct: 397 TKS-----FGAAGGYI--SATPNIINKLRV--TNPGYVY 426 >gi|328793440|ref|XP_396188.3| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Apis mellifera] Length = 210 Score = 38.5 bits (88), Expect = 0.78, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 29/52 (55%) Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT +L+ ++ A++A A E +G N+G+ FQL DDLLD LP Sbjct: 61 KTASLIANTLKAEAMLADADDQLAELAFQYGRNIGLAFQLVDDLLDFVSTLP 112 >gi|215480271|gb|ACJ67480.1| quorum sensing protein [Bacillus subtilis] Length = 241 Score = 38.5 bits (88), Expect = 0.78, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + + IE + + I DD+ DN ++ D A A L T + ++I S Sbjct: 52 LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 K +LSLT LQ L GQ +D+ E++ + K+K+G+L+ Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 G +A N E + + LG++ Q+A+D Sbjct: 158 LGVYLATGECN--ETVEEYSRYLGVVEQIAND 187 >gi|215480261|gb|ACJ67475.1| quorum sensing protein [Bacillus subtilis] Length = 266 Score = 38.5 bits (88), Expect = 0.78, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + + IE + + I DD+ DN ++ D A A L T + ++I S Sbjct: 52 LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 K +LSLT LQ L GQ +D+ E++ + K+K+G+L+ Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 G +A N E + + LG++ Q+A+D Sbjct: 158 LGVYLATGECN--ETVEEYSRYLGVVEQIAND 187 >gi|145641599|ref|ZP_01797176.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae R3021] gi|145273646|gb|EDK13515.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 22.4-21] Length = 144 Score = 38.5 bits (88), Expect = 0.78, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%) Query: 162 GQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENL 217 GQ LD+ E I +++ +I + KTGAL+ A + G I + H + E+ L + E + Sbjct: 4 GQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAI 63 Query: 218 GIIFQLADDLLDCEED 233 G+ FQ+ DD+LD E D Sbjct: 64 GLAFQVQDDILDIEGD 79 >gi|68165941|gb|AAY87903.1| farnesyl diphosphate synthase [Panax ginseng] Length = 342 Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 24/213 (11%) Query: 34 QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86 Q +R+L Y + GGK R L+ E L + + +G IE + Y Sbjct: 33 QWVERMLD---YNVPGGKLNRGLSVIDSYKLLKEGKELSDDEIFLSSALGWCIEWLQAYF 89 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+ DD+ MD+ + RRG+P + +V I +G+L I K + Sbjct: 90 LVLDDI--MDSSHTRRGQPC-WFRLPKVGMIAVNDGILLRN-HIPRILKKHFRQKPYYVD 145 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCFACESGAI 198 +L L + + Q GQM+D+ + E + I + KT + + A+ Sbjct: 146 LLDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLPIHRRIVQYKTAYYSFYLPVACAL 204 Query: 199 MAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230 + EK ++ +G FQ+ DD LDC Sbjct: 205 LMSGEDLEKHTNVKDILIEMGTYFQVQDDYLDC 237 >gi|67619073|ref|XP_667626.1| farnesyl pyrophosphate synthase [Cryptosporidium hominis TU502] gi|54658782|gb|EAL37400.1| farnesyl pyrophosphate synthase [Cryptosporidium hominis] Length = 353 Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 40 LSAIRYALLGGKKIRS---FLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 L+ I Y + GK IR L++ +S + N+ + +G +E I LI DD+ M Sbjct: 46 LNCIDYNVKKGKHIRGKILVLISSLSSAYSNIKRDSIYLLGWVVEAIQALILIADDI--M 103 Query: 96 DNGYIRRGKPTVHIQYDEVTAI 117 D+G RRG P +I + + AI Sbjct: 104 DSGKFRRGAPCWYIVHGQSNAI 125 >gi|253761777|ref|XP_002489263.1| hypothetical protein SORBIDRAFT_0011s005450 [Sorghum bicolor] gi|241947012|gb|EES20157.1| hypothetical protein SORBIDRAFT_0011s005450 [Sorghum bicolor] Length = 325 Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 29/46 (63%) Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + S AI + S + E++ +G NLG+ FQ+ DD+LD Sbjct: 176 KTASLIAASTRSAAIFSGVSTSICEQMYEYGRNLGLSFQVVDDILD 221 >gi|66357330|ref|XP_625843.1| farnesyl pyrophosphate synthase [Cryptosporidium parvum Iowa II] gi|46226968|gb|EAK87934.1| putative farnesyl pyrophosphate synthase [Cryptosporidium parvum Iowa II] Length = 384 Score = 38.1 bits (87), Expect = 0.91, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%) Query: 40 LSAIRYALLGGKKIRS---FLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 L+ I Y + GK IR L++ +S + N+ + +G +E I LI DD+ M Sbjct: 77 LNCIDYNVKKGKHIRGKILVLISSLSSAYSNIKRDSIYLLGWVVEAIQALILIADDI--M 134 Query: 96 DNGYIRRGKPTVHIQYDEVTAI 117 D+G RRG P +I + + AI Sbjct: 135 DSGKFRRGAPCWYIVHGQSNAI 156 >gi|295674851|ref|XP_002797971.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides brasiliensis Pb01] gi|226280621|gb|EEH36187.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides brasiliensis Pb01] Length = 407 Score = 38.1 bits (87), Expect = 0.92, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 13/181 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR L+ +V + + + +H SL+ DD+ D+ +RRG P H Sbjct: 107 GKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLVDDV--EDSSNLRRGVPVAHN 164 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I + N + A E + ++ N+ + +L+L G+ + + Sbjct: 165 IFGTAQTINSANYVYFLALEEVQKLRSPNAINVYVKELLNLHRGQGMDVFWRDTLTCPTE 224 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +E+++ M+ KTG L A + +M S E + + +G+IFQ+ DD L Sbjct: 225 EEYLE-----MVGN-KTGGLFRLAIK---LMQAESDTEIDCV-ALANLMGLIFQICDDYL 274 Query: 229 D 229 + Sbjct: 275 N 275 >gi|222629694|gb|EEE61826.1| hypothetical protein OsJ_16466 [Oryza sativa Japonica Group] Length = 403 Score = 38.1 bits (87), Expect = 0.93, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 33/208 (15%) Query: 45 YALLGGKKIRSFLVTECASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 Y + GGK R V + L + + A +G +E + +L+ DD+ DN Sbjct: 102 YNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLDDIT--DN 159 Query: 98 GYIRRGK------PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 Y RR PTV + +AI G L + II K K+ ++ L Sbjct: 160 AYTRRDNLCWYKLPTVGM-----SAINDGVLLKCHVQAII---KRYFKEKFYFLDLMELW 211 Query: 152 HNIGLQGMLGGQMLDI-------QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHAS 203 + IGLQ +G QMLD+ +D Q + I K KT + + A++ + + Sbjct: 212 NEIGLQTAMG-QMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGA 270 Query: 204 Q-NEKERLRCFGENLGIIFQLADDLLDC 230 + ++ L+ +G+ FQ+ DD LDC Sbjct: 271 RLSDYVELKNVLIEMGVYFQIQDDYLDC 298 >gi|255642257|gb|ACU21393.1| unknown [Glycine max] Length = 342 Score = 38.1 bits (87), Expect = 0.95, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 17/97 (17%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFN---------VNHLTALRVGAAIECIHCYSL 87 DR+L Y + GGK R V + L + H +AL G IE + Y L Sbjct: 36 DRMLD---YNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFHASAL--GWCIEWLQAYFL 90 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + DD+ MDN + RRG+P + +V I A +G+L Sbjct: 91 VLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVL 124 >gi|145591919|ref|YP_001153921.1| polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514] gi|145283687|gb|ABP51269.1| Polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 263 Score = 38.1 bits (87), Expect = 0.95, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 23/195 (11%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA---IECIHCYSLIHDDLPS 94 L A RY + GK +R L+ + + L RV A +E +H SL+ DD+ Sbjct: 31 LRDAARYYIEKPGKMLRPILLLTFSYSLDRRSLMDPRVLQAATIVELLHIVSLLQDDV-- 88 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD RRG T + Y + ++A + L I S K +K + ++ ++ Sbjct: 89 MDKHDERRGAKTPRVIYGDERTVLASDWL------IAESIKRAVK---LGEEVVEYLADV 139 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 Q + GQ LD++ E + +KT L+ A++ ++ E + G Sbjct: 140 A-QRLSMGQALDLEGEREKAAE------LKTAPLIEATLVLPALLLK-RRDVLELAKRLG 191 Query: 215 ENLGIIFQLADDLLD 229 +LG+++Q +DDL D Sbjct: 192 ASLGVLYQYSDDLSD 206 >gi|70982877|ref|XP_746966.1| geranylgeranyl pyrophosphate synthetase AtmG [Aspergillus fumigatus Af293] gi|66844591|gb|EAL84928.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus fumigatus Af293] gi|159123850|gb|EDP48969.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus fumigatus A1163] Length = 357 Score = 38.1 bits (87), Expect = 0.97, Method: Compositional matrix adjust. Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 40/242 (16%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61 G PS LQE K D D ++ ++ + GK IR L++ Sbjct: 52 TGSSPSDLQEQRKLAD---DKIIWAPLDYLCS--------------FPGKDIRGKLISAF 94 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + + +H SL+ DD+ D+ +RRG P H + I + N Sbjct: 95 NQWLQIPEDKLDVIKRVVGLLHSASLLIDDI--QDSSKLRRGFPVAHSIFGIAQTINSAN 152 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFI--DETQV 177 +A + +LK + + M+ T + + GQ LD+ +D E + Sbjct: 153 FAYFWA-------QQELKKLGKPEAMVIFTEE--MLRLHRGQGLDLYWRDSLTCPTEEEY 203 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG--ENLGIIFQLADDLLDCEEDLP 235 + KTG L A + + +H +++ C + LGIIFQ+ DD + + DL Sbjct: 204 LEMVANKTGGLFRLAIKLMQMESHNTED------CVPLVDLLGIIFQIRDDYQNLQSDLY 257 Query: 236 KK 237 K Sbjct: 258 AK 259 >gi|215480219|gb|ACJ67454.1| quorum sensing protein [Bacillus subtilis] Length = 270 Score = 38.1 bits (87), Expect = 0.98, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 21/165 (12%) Query: 65 FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F+ +TA+ + A+ IE + + I DD+ DN ++ D I A L Sbjct: 41 FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATTL 94 Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 T + ++IS S QL LSLT LQ L GQ D+ + E++ + Sbjct: 95 YTLSLQVISLVSNNPQL---------LSLTLQYSLQS-LQGQHADLNVKISSESEYIEMI 144 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 K+K+G+L+ G +A N E + + LGI+ Q+A+D Sbjct: 145 KLKSGSLVTLPSVLGVYLATGEIN--ETVEEYSLYLGIVEQIAND 187 >gi|297790967|ref|XP_002863368.1| farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp. lyrata] gi|297309203|gb|EFH39627.1| farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp. lyrata] Length = 343 Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 31/210 (14%) Query: 45 YALLGGKKIRSFLVTECASLFNVNH-LTALRV------GAAIECIHCYSLIHDDLPSMDN 97 Y + GGK R V + L LT V G IE + Y L+ DD+ MDN Sbjct: 42 YNVRGGKLNRGLSVVDSFKLLKEGKDLTEQEVFLSCALGWCIEWLQAYFLVLDDI--MDN 99 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHN 153 RRG+P + +V + +G+L + + LK + R ++ L + Sbjct: 100 SVTRRGQPC-WFRVPQVGMVAINDGIL-----LRNHIHRILKKHFRGMPYYVDLVDLFNE 153 Query: 154 IGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGALMCFACESGAIMAHASQN 205 + LQ G QM+D+ F E + I + KT A F + A +N Sbjct: 154 VELQTACG-QMIDLITTFEGEKDLSKYSLSIHRRIVQYKT-AYYSFYLPVACALLMAGEN 211 Query: 206 EKERL--RCFGENLGIIFQLADDLLDCEED 233 + + + ++GI FQ+ DD LDC D Sbjct: 212 LENHIDVKNVLVDMGIYFQVQDDYLDCFAD 241 >gi|115461044|ref|NP_001054122.1| Os04g0657300 [Oryza sativa Japonica Group] gi|39545740|emb|CAE75966.1| OSJNBa0071I13.18 [Oryza sativa Japonica Group] gi|113565693|dbj|BAF16036.1| Os04g0657300 [Oryza sativa Japonica Group] gi|125550054|gb|EAY95876.1| hypothetical protein OsI_17742 [Oryza sativa Indica Group] Length = 407 Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 33/208 (15%) Query: 45 YALLGGKKIRSFLVTECASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 Y + GGK R V + L + + A +G +E + +L+ DD+ DN Sbjct: 106 YNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLDDIT--DN 163 Query: 98 GYIRRGK------PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 Y RR PTV + +AI G L + II K K+ ++ L Sbjct: 164 AYTRRDNLCWYKLPTVGM-----SAINDGVLLKCHVQAII---KRYFKEKFYFLDLMELW 215 Query: 152 HNIGLQGMLGGQMLDI-------QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHAS 203 + IGLQ +G QMLD+ +D Q + I K KT + + A++ + + Sbjct: 216 NEIGLQTAMG-QMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGA 274 Query: 204 Q-NEKERLRCFGENLGIIFQLADDLLDC 230 + ++ L+ +G+ FQ+ DD LDC Sbjct: 275 RLSDYVELKNVLIEMGVYFQIQDDYLDC 302 >gi|296818379|ref|XP_002849526.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480] gi|238839979|gb|EEQ29641.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480] Length = 366 Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 A L GK+IR L+ V+ + + I H SL+ DD+ DN +RRG P Sbjct: 84 AALPGKEIRRKLLDAFNVWLKVDEESCEIIARTITMAHNASLMIDDI--QDNSQLRRGVP 141 Query: 106 TVHIQYDEVTAIIAGN 121 T H Y I A N Sbjct: 142 TAHRVYGIAQTINAAN 157 >gi|238498004|ref|XP_002380237.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] gi|220693511|gb|EED49856.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] Length = 387 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 73/200 (36%), Gaps = 32/200 (16%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L K IR + S V ++ + + I +H SL+ DD+ DN RRG PT Sbjct: 113 LPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDI--EDNSVPRRGSPTT 170 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-----LQGMLGG 162 H + I + N AFE + L + IG L+ + G Sbjct: 171 HTLFGVGQTINSANYTFVCAFEELQK--------------LQSPNAIGVFIEQLKNLHCG 216 Query: 163 QMLDIQDEF------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 Q LD+ ++ DE + K +C G + + E R F Sbjct: 217 QGLDLYWKYNTHVPTADEYMTMIDHKTGGPFRLCVRLMQG---ESSGKTEHIDARRFVTL 273 Query: 217 LGIIFQLADDL--LDCEEDL 234 LG FQ+ DD L EDL Sbjct: 274 LGRYFQIRDDYQNLTSAEDL 293 >gi|215480217|gb|ACJ67453.1| quorum sensing protein [Bacillus subtilis] Length = 268 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 21/165 (12%) Query: 65 FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F+ +TA+ + A+ IE + + I DD+ DN ++ D I A L Sbjct: 41 FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATTL 94 Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 T + ++IS S QL LSLT LQ L GQ D+ + E++ + Sbjct: 95 YTLSLQVISLVSNNPQL---------LSLTLQYSLQS-LQGQHADLNVKISSESEYIEMI 144 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 K+K+G+L+ G +A N E + + LGI+ Q+A+D Sbjct: 145 KLKSGSLVTLPSVLGVYLATGEIN--ETVEEYSLYLGIVEQIAND 187 >gi|215480281|gb|ACJ67485.1| quorum sensing protein [Bacillus subtilis] Length = 266 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 21/165 (12%) Query: 65 FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F+ +TA+ + A+ IE + + I DD+ DN ++ D I A L Sbjct: 41 FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATTL 94 Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 T + ++IS S QL LSLT LQ L GQ D+ + E++ + Sbjct: 95 YTLSLQVISLVSNNPQL---------LSLTLQYSLQS-LQGQHADLNVKISSESEYIEMI 144 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 K+K+G+L+ G +A N E + + LGI+ Q+A+D Sbjct: 145 KLKSGSLVTLPSVLGVYLATGEIN--ETVEEYSLYLGIVEQIAND 187 >gi|14279425|gb|AAK58594.1|AF268889_1 farnesyl pyrophosphate synthase [Humulus lupulus] Length = 342 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 18/167 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +G IE + Y L+ DD+ MDN RRG+P + +V I A +G+L I Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDNSVTRRGQPC-WFRVPKVGLIAANDGILLRN-HIPRIL 133 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186 K K +L L + + Q GQM+D+ E + I + KT Sbjct: 134 KKHFKGKSYYVDLLDLFNEVEFQTA-SGQMIDLITTIEGEKDLSKYSIPLHHRIVQYKTA 192 Query: 187 ALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + AC +MA + + ++ +G FQ+ DD LDC Sbjct: 193 YYSFYLPVAC--ALVMAGENLDNHVDVKNVLIEMGTYFQVQDDYLDC 237 >gi|321261676|ref|XP_003195557.1| farnesyltranstransferase [Cryptococcus gattii WM276] gi|317462031|gb|ADV23770.1| Farnesyltranstransferase, putative [Cryptococcus gattii WM276] Length = 322 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK+IRS L+ V+ + + + +H SL+ DD+ DN +RRG P H Sbjct: 35 GKEIRSKLIDAFNLWLEVDKDDLVVITKVVRMLHNASLLMDDVE--DNSELRRGLPVAHT 92 Query: 110 QYDEVTAIIAGNGLLTYAFE 129 Y I N + AF+ Sbjct: 93 IYGVPQTINTANYVYFLAFQ 112 >gi|215480215|gb|ACJ67452.1| quorum sensing protein [Bacillus subtilis] Length = 265 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 21/165 (12%) Query: 65 FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F+ +TA+ + A+ IE + + I DD+ DN ++ D I A L Sbjct: 41 FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATTL 94 Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 T + ++IS S QL LSLT LQ L GQ D+ + E++ + Sbjct: 95 YTLSLQVISLVSNNPQL---------LSLTLQYSLQS-LQGQHADLNVKISSESEYIEMI 144 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 K+K+G+L+ G +A N E + + LGI+ Q+A+D Sbjct: 145 KLKSGSLVTLPSVLGVYLATGEIN--ETVEEYSLYLGIVEQIAND 187 >gi|168203179|gb|ACA21460.1| farnesyl diphosphate synthase 4 [Picea abies] Length = 347 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 76/202 (37%), Gaps = 21/202 (10%) Query: 45 YALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDN 97 Y + GGK R V + L +G IE + Y LI DD+ MD+ Sbjct: 46 YTVPGGKLNRGLSVIDSYRLLKAGKEISEDEVFLGCVLGWCIEWLQAYFLILDDI--MDS 103 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 + RRG+P + +V I +G+L I K + +L L + + Q Sbjct: 104 SHTRRGQPC-WFRLPKVGLIAVNDGILLRN-HICRILKKHFRTKPYYVDLLDLFNEVEFQ 161 Query: 158 GMLGGQMLDI---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 GQ+LD+ ++ T V ++Q +MA + + Sbjct: 162 TA-SGQLLDLITTHEGATDLSKYKMPTYVRIVQYKTAYYSFYLPVACALVMAGENLDNHV 220 Query: 209 RLRCFGENLGIIFQLADDLLDC 230 ++ +G FQ+ DD LDC Sbjct: 221 DVKNILVEMGTYFQVQDDYLDC 242 >gi|281201286|gb|EFA75498.1| geranylgeranyl diphosphate synthase 1 [Polysphondylium pallidum PN500] Length = 300 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 3/107 (2%) Query: 24 LLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82 + + S+ ++ + LL +Y + GK IR+ L+ V+ +V ++ + Sbjct: 1 MYKKFSYPLSEKDVALLEPYKYISETPGKGIRTILIEAFNHWLKVDSEYVKKVADIVQAL 60 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 H SL+ DD+ DN +RRG P H Y I N + A + Sbjct: 61 HMSSLLIDDIE--DNSKLRRGMPVAHDIYGYAQTINCANTVYFLAMD 105 >gi|212532131|ref|XP_002146222.1| geranylgeranyl diphosphate synthase [Penicillium marneffei ATCC 18224] gi|210071586|gb|EEA25675.1| geranylgeranyl diphosphate synthase [Penicillium marneffei ATCC 18224] Length = 396 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 13/181 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR ++ + V + + + + +H SL+ DD+ DN +RRG P H Sbjct: 104 GKDIRKQMIAAFNAWLKVPEQSLEIITSVVAMLHNASLLIDDV--EDNSVLRRGIPVAHN 161 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I + N + A + + + I ++ +L+L G+ + + Sbjct: 162 IFGTAQTINSANYVYFLALQELRKLNSPAAIEIYTEELLNLHKGQGMDLFWRDTLTCPTE 221 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +E+++ M+ KTG L A + +M S+ K+ + LG+IFQ+ DD L Sbjct: 222 EEYLE-----MVDN-KTGGLFRLAVK---LMQAESEAGKDCVPLVN-ILGLIFQICDDYL 271 Query: 229 D 229 + Sbjct: 272 N 272 >gi|215480257|gb|ACJ67473.1| quorum sensing protein [Bacillus subtilis] Length = 266 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 21/165 (12%) Query: 65 FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F+ +TA+ + A+ IE + + I DD+ DN ++ D I A L Sbjct: 41 FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATTL 94 Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 T + ++IS S QL LSLT LQ L GQ D+ + E++ + Sbjct: 95 YTLSLQVISLVSNNPQL---------LSLTLQYSLQS-LQGQHADLNVKISSESEYIEMI 144 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 K+K+G+L+ G +A N E + + LGI+ Q+A+D Sbjct: 145 KLKSGSLVTLPSVLGVYLATGEIN--ETVEEYSLYLGIVEQIAND 187 >gi|238504512|ref|XP_002383487.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] gi|220690958|gb|EED47307.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] Length = 368 Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 29/196 (14%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L GK ++ N++ +A + + + SL+ DD+ D +RRG P Sbjct: 85 LPGKNTVGKVIESLRPWLNISDRSAAVLTDVMTMLQNSSLMLDDIE--DGSQLRRGAPAA 142 Query: 108 HIQY------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 H++Y + T IIA +I+S +T L R + L+ LQ + Sbjct: 143 HVKYGLSQTINSTTYIIA---------KIVSDVQTHL----RPECAKVLSEE--LQTLTL 187 Query: 162 GQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 GQ LD+ F + + ++ KTG I A+A+ N++ LR L Sbjct: 188 GQALDLNWTFNKKCPSVNEYLVMIDHKTGGFFRLMLRIMEIEANATPNDE--LRHLITLL 245 Query: 218 GIIFQLADDLLDCEED 233 G +Q+ DD + D Sbjct: 246 GRYYQIRDDYQNLASD 261 >gi|241836196|ref|XP_002415093.1| geranylgeranyl diphosphate synthase, putative [Ixodes scapularis] gi|215509305|gb|EEC18758.1| geranylgeranyl diphosphate synthase, putative [Ixodes scapularis] Length = 288 Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 20/191 (10%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 +L Y L + GK+IR+ L ++ +G ++ +H SL+ D N Sbjct: 10 ILQPYHYILKIPGKQIRTKLAQAFNYWLKISPEKCQVIGEIVQMLHNASLLQD------N 63 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG P H + + I + N + E + ++ +L L G++ Sbjct: 64 SSLRRGVPVAHNIFGVASTINSANYVYFLGLEKCLELDNPRATAVFTEQILELHRGQGME 123 Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 + +D +I E+ + K KTG L A +M S+N+ + G Sbjct: 124 -------IYWRDNYICPTESDYSRMVKRKTGGLFGLAV---GLMQLFSENKGNFTKLIG- 172 Query: 216 NLGIIFQLADD 226 LG+ FQ+ DD Sbjct: 173 TLGLYFQIRDD 183 >gi|30984142|dbj|BAC53873.2| farnesyl pyrophosphate synthase [Phaseolus lunatus] Length = 243 Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 18/170 (10%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A +G IE + Y L+ DD+ MDN + RRG+P + +V I A +G+L I Sbjct: 12 ASALGWCIEWLQAYFLVLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVLLRN-HIP 67 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKM 183 K + +L L + + Q GQM+D+ E + I + Sbjct: 68 RILKKHFRGKPYYVDLLDLFNEVEFQTA-SGQMIDLITTLQGEKDLSKYTLTLHRRIVQY 126 Query: 184 KTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KT + AC +MA + + ++ +G FQ+ DD LDC Sbjct: 127 KTAYYSFYLPVAC--ALLMAGDNLDNHVDVKNILVEMGTYFQVQDDYLDC 174 >gi|83766667|dbj|BAE56807.1| unnamed protein product [Aspergillus oryzae] Length = 362 Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L K IR + S V ++ + + I +H SL+ DD+ DN RRG PT Sbjct: 79 LPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDIE--DNSVPRRGSPTA 136 Query: 108 HIQYDEVTAIIAGNGLLTYAFE 129 H + I + N AFE Sbjct: 137 HTLFGVGQTINSANYTFVCAFE 158 >gi|312087949|ref|XP_003145671.1| geranylgeranyl pyrophosphate synthetase [Loa loa] gi|307759165|gb|EFO18399.1| geranylgeranyl pyrophosphate synthetase [Loa loa] Length = 306 Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 34/204 (16%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +LL+ +Y L L GK++RS L S V+ + +E +H SL+ DD+ D Sbjct: 7 QLLAPYQYILKLPGKQLRSQLAKAFNSWLQVDVEVLDSIMTVVEMLHNASLMIDDIE--D 64 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA---------FEIISSPKTQLKDNIRSQLM 147 + +RRG P H Y I N + A FE + QL + R Q Sbjct: 65 SSLLRRGLPVTHSIYGIPRTINTANYVYFAALSRCILLGKFEAVKIFTEQLLELHRGQ-- 122 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 G+ L +D E + + KTG L + + + Sbjct: 123 --------------GKELYWRDTVQCPTEEEYEQMAMQKTGGLFALTIQLMELFGKKQYD 168 Query: 206 EKERLRCFGENLGIIFQLADDLLD 229 K +R NL + FQ+ DD ++ Sbjct: 169 FKSLIR----NLAVYFQIRDDYIN 188 >gi|317143053|ref|XP_001818809.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40] Length = 384 Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L K IR + S V ++ + + I +H SL+ DD+ DN RRG PT Sbjct: 101 LPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDI--EDNSVPRRGSPTA 158 Query: 108 HIQYDEVTAIIAGNGLLTYAFE 129 H + I + N AFE Sbjct: 159 HTLFGVGQTINSANYTFVCAFE 180 >gi|18313968|ref|NP_560635.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2] gi|18161541|gb|AAL64817.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2] Length = 263 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 31/199 (15%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA---IECIHCYSLIHDDLPS 94 L A+RY + GK +R L+ + + L R+ A IE +H SL+ DD+ Sbjct: 31 LRKAVRYYIETPGKLLRPILLLTFSYTLDRRALMDPRLIQAATIIELLHVVSLLQDDV-- 88 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTH 152 MD RRG T + Y + I+A + L+ ++IR + L + Sbjct: 89 MDKHEERRGIKTPRVLYGDDRTILASDWLIA--------------ESIRRAVKLGPEVVE 134 Query: 153 NIG--LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 + Q + GQ LD+ E + +KT L+ AI+ + E Sbjct: 135 YLADVAQRLSRGQALDLDGERERAAE------LKTAPLIEATLVLPAIILRRREI-LELA 187 Query: 211 RCFGENLGIIFQLADDLLD 229 + G +LG+++Q +DD+ D Sbjct: 188 KKLGRSLGVLYQYSDDISD 206 >gi|134082876|emb|CAK42706.1| unnamed protein product [Aspergillus niger] Length = 619 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 19/207 (9%) Query: 33 TQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 T+H LL+ Y A L K +R + + + + + +H SL+ DD Sbjct: 400 TEH---LLAPAEYIASLPSKGVREAFIDALNVWLALPDRFVSVMKSIAKTLHNASLMLDD 456 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + D +RRG+P H + + I + N +L A + + L+D+ + + T Sbjct: 457 IE--DGSPLRRGQPATHTVFGQALTINSANFVLIQAMDQVR----LLEDSRCLDIFVEET 510 Query: 152 HNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 N+ + GQ D+ QDE E + + + KTG L A + +N Sbjct: 511 RNLFI-----GQSFDLYWTRQDECPSEEEYLEMIRQKTGGLFRLLARLMMQKATSKKNRC 565 Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDL 234 L + +G FQ+ DD + E++ Sbjct: 566 LPLEPLVDLMGEYFQIRDDYKNLAEEV 592 >gi|251795064|ref|YP_003009795.1| polyprenyl synthetase [Paenibacillus sp. JDR-2] gi|247542690|gb|ACS99708.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2] Length = 306 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 16/158 (10%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 R AA+E S I DDL D H + +V A ++ ++ S Sbjct: 63 RAAAAVELFILASDILDDLQDGD---------APHQAWSQVPPAAAMQAAASF---MVLS 110 Query: 134 PKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 + L+ L+L + N L GQMLD+ + DE + + K+ AL+ F Sbjct: 111 QQAVLELEFDQVLLLRVARMMNGQLLKAANGQMLDLMNAVTDEDSYLAMVQHKSAALIVF 170 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 AC +G ++ A + + + E +G+ Q+ +D+ D Sbjct: 171 ACMTGVML--AGREWHPVVAEYAEEVGMAAQIKNDIKD 206 >gi|308801677|ref|XP_003078152.1| farnesyl pyrophosphate synthase (ISS) [Ostreococcus tauri] gi|116056603|emb|CAL52892.1| farnesyl pyrophosphate synthase (ISS) [Ostreococcus tauri] Length = 346 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 29/179 (16%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-EVTAIIAGNGLLTYAFEI 130 A+ VG IE + Y L+ DD+ MD RRG+P + Q D ++TAI +G+L + Sbjct: 79 AMVVGWCIEFLQAYFLVADDI--MDESVTRRGQPCWYRQPDVKMTAI--NDGILL-EMML 133 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMK--- 184 K K ++ L H++ Q GQ++D+ +D ++ M M+ Sbjct: 134 YKCLKKYCKGLECYHDLVELFHDVTYQ-TASGQLIDLITAPIGIVDLSKYTMEAYMRIVT 192 Query: 185 -TGALMCFACESGAIM---------AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A F + M A++ NE C LG FQ+ DD LDC D Sbjct: 193 YKTAFYTFYLPAACAMRLCGVKDEAAYSKANEI----CI--KLGQFFQIQDDYLDCYGD 245 >gi|256752080|ref|ZP_05492948.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256749090|gb|EEU62126.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 124 Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%) Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLP 235 I + KT AL+ + +GA +A A++ + LR + +G FQ+ DD+LD EE L Sbjct: 5 FIHEHKTAALIEASVCAGAYIAGATEEDIHALREYARLIGFAFQIKDDILDVIGEEEKLG 64 Query: 236 KK 237 KK Sbjct: 65 KK 66 >gi|322800773|gb|EFZ21659.1| hypothetical protein SINV_04639 [Solenopsis invicta] Length = 348 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 82/210 (39%), Gaps = 33/210 (15%) Query: 44 RYALLGGKKIRSF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMD 96 +Y + GKK+R L+ SL + + LT + +E + Y L+ DD+ D Sbjct: 44 QYTVPKGKKLRGLTLIKVYKSLVSNDQLTEDNIRLVQILAWCVELMQTYILVLDDI--QD 101 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA----------------FEIISSPKTQLKD 140 + +RRG+P H+ Y V +G+L + ++ + + + Sbjct: 102 HSLLRRGQPCWHL-YSNVGEAAVNDGVLLESAMYYIIRKHFKGKECYVNLVETFQDIIFK 160 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 + Q M + N G + L +D + I+ + + T A M FA M Sbjct: 161 TLMGQCMDLYSSNFGKKPNLDLFTIDRHNTIIEIKTAYYTYVLPTFAAMHFAGIKNPEMF 220 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230 + + +G +FQ+ DD LDC Sbjct: 221 RQA-------KIIALEIGHMFQVQDDYLDC 243 >gi|317156125|ref|XP_001825412.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40] Length = 692 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 11/188 (5%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L K +R V + + RV + E +H SL+ DD+ D+ +RRG+P Sbjct: 409 LPSKGVREAFVDAMNVWLVLPNDVVNRVKSIAETLHNASLLLDDIE--DSSPLRRGQPAA 466 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQML 165 H + + I + N LL A + Q ++ + M L + + L G+ Sbjct: 467 HTIFGQGQTINSANYLLIQAMHQVRQLDNQRCMDVFVEEMRNLFIGQSFDLYWTRQGECP 526 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 QDE+++ MI + KTG L A N L LG FQ+ D Sbjct: 527 S-QDEYLE-----MISQ-KTGGLFRLLTRLMTEKASTQHNSTITLDSLVSLLGQYFQIRD 579 Query: 226 DLLDCEED 233 D + ED Sbjct: 580 DYKNLTED 587 >gi|281413632|ref|ZP_06245374.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC 2665] Length = 371 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Query: 49 GGKKIRSFLV--TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R+ L A+ GAA E +LIHDD+ +D RRG P+ Sbjct: 10 GGKRLRAVLAWLGWRAAGGEAEDPRIAEAGAAFELFQAAALIHDDI--LDRSDTRRGMPS 67 Query: 107 VHIQYDEV 114 VH +++ + Sbjct: 68 VHRRFESL 75 >gi|219666168|ref|YP_002456603.1| geranylgeranyl pyrophosphate synthase-like protein [Desulfitobacterium hafniense DCB-2] gi|219536428|gb|ACL18167.1| Geranylgeranyl pyrophosphate synthase-like protein [Desulfitobacterium hafniense DCB-2] Length = 318 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 30/54 (55%) Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 Q F + K G+L AC+ GAI+ A + L FG NLGI+ Q+ +DL D Sbjct: 160 QYFEMAGQKAGSLTACACKIGAILGGAEEPVIHGLEQFGINLGILNQIRNDLND 213 >gi|239610018|gb|EEQ87005.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis ER-3] Length = 405 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 19/184 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR +T +V + + + +H SL+ DD+ D+ +RRG P H Sbjct: 107 GKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDVE--DSSNLRRGVPVAHN 164 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + I + N + A E + K+ NI + +L+L GQ +D+ Sbjct: 165 IFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHR---------GQGMDVFW 215 Query: 168 QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D T+ ++ + KTG L A + + A + +G+IFQ+ D Sbjct: 216 RDTLTCPTEEDYLEMVGNKTGGLFRLAIK----LMQAESDSGIDCVALVNLMGLIFQICD 271 Query: 226 DLLD 229 D L+ Sbjct: 272 DYLN 275 >gi|89892905|ref|YP_516392.1| hypothetical protein DSY0159 [Desulfitobacterium hafniense Y51] gi|89332353|dbj|BAE81948.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 319 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 30/54 (55%) Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 Q F + K G+L AC+ GAI+ A + L FG NLGI+ Q+ +DL D Sbjct: 161 QYFEMAGQKAGSLTACACKIGAILGGAEEPVIHGLEQFGINLGILNQIRNDLND 214 >gi|317036431|ref|XP_001397340.2| geranylgeranyl pyrophosphate synthase [Aspergillus niger CBS 513.88] Length = 696 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 15/156 (9%) Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H SL+ DD+ D +RRG+P H + + I + N +L A + + L+D+ Sbjct: 447 LHNASLMLDDIE--DGSPLRRGQPATHTVFGQALTINSANFVLIQAMDQVR----LLEDS 500 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGA 197 + + T N+ + GQ D+ QDE E + + + KTG L Sbjct: 501 RCLDIFVEETRNLFI-----GQSFDLYWTRQDECPSEEEYLEMIRQKTGGLFRLLARLMM 555 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + +N L + +G FQ+ DD + E+ Sbjct: 556 QKATSKKNRCLPLEPLVDLMGEYFQIRDDYKNLAEE 591 >gi|119579179|gb|EAW58775.1| hCG2042152 [Homo sapiens] Length = 318 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 9/69 (13%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDN 97 Y + GK RS +V A N++H + V A+ E IH SL+HDD+ +DN Sbjct: 82 YFDVKGKAFRSIIVVLMARACNIHHNNSRHVQASQRATALIAEMIHTASLVHDDV--IDN 139 Query: 98 GYIRRGKPT 106 R+GK T Sbjct: 140 ARSRKGKHT 148 >gi|59709769|gb|AAW88510.1| geranylgeranyl diphosphate synthase [Neotyphodium lolii] gi|59709775|gb|AAW88514.1| geranylgeranyl diphosphate synthase [Epichloe festucae] Length = 334 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 23/196 (11%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L K IRS L V L + I+ +H SL+ DD+ D+ +RRG P Sbjct: 50 LPSKDIRSGLTDAINEFLRVPEEKVLVIKRIIDLLHNASLLIDDI--QDSSKLRRGVPVA 107 Query: 108 HIQYDEVTAIIAGNGLLTY-----AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 H + I + N L Y E +++P+ I ++ +++L G++ Sbjct: 108 HHIFGIAQTINSAN--LAYFIAQRELEKLTNPRAFA---IYNEELINLHRGQGMELHWRE 162 Query: 163 QM-LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + +DE++ MIQK KTG L A ++ S ++ + + + LG +F Sbjct: 163 SLHCPTEDEYLR-----MIQK-KTGGLFRLAIR---LLQGESASDDDYVSLI-DTLGTLF 212 Query: 222 QLADDLLDCEEDLPKK 237 Q+ DD + + D+ K Sbjct: 213 QIRDDYQNLQSDIYSK 228 >gi|145344237|ref|XP_001416643.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576869|gb|ABO94936.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 348 Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 21/175 (12%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-EVTAIIAGNGLLTYAFEI 130 A+ VG IE + Y L+ DD+ MD RRG+P + Q D ++TAI +G+L + Sbjct: 81 AMVVGWCIEFLQAYFLVADDI--MDESVTRRGQPCWYRQPDVKMTAI--NDGILL-EMML 135 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMK--- 184 K K ++ L H++ Q GQ++D+ +D ++ M M+ Sbjct: 136 YKCLKKYCKGLECYADLVELFHDVTYQ-TASGQLIDLITAPIGVVDLSKYTMEAYMRIVT 194 Query: 185 -TGALMCFACESGAIM-----AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A F + M + EK C LG FQ+ DD LDC D Sbjct: 195 YKTAFYTFYLPAACAMRLCGVKDEAAYEKANEICI--KLGQFFQIQDDYLDCYGD 247 >gi|226480790|emb|CAX73492.1| dimethylallyltranstransferase [Schistosoma japonicum] Length = 386 Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLP 93 + + Y L GK+IR LV +F + R +G +E +H L+ DD+ Sbjct: 45 NVVSYNLSSGKRIRGVLVVLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDI- 103 Query: 94 SMDNGYIRRGKPTVHI 109 +DN +RRG+P H+ Sbjct: 104 -IDNSTLRRGQPCWHL 118 >gi|66735446|gb|AAY53905.1| farnesyl pyrophosphate synthase [Panax notoginseng] Length = 343 Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 25/214 (11%) Query: 34 QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86 Q +R+L Y + GGK R L+ E L + + +G IE + Y Sbjct: 33 QWVERMLD---YNVPGGKLNRGLSVIDSYKLLKEGKELSDDEIFLSSALGWCIEWLQAYF 89 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+ DD+ MD+ + RRG+P + +V I +G+L I K + Sbjct: 90 LVLDDI--MDSSHTRRGQPC-WFRLPKVGMIAVNDGILLRN-HIPRILKKHFRQKPYYVD 145 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCFACESGAI 198 +L L + + Q G QM+D+ + E + I + KT + + A+ Sbjct: 146 LLDLFNEVEFQTACG-QMIDLITTLVGEKDLSKYSLPIHRRIVQYKTAYYSFYLPVACAL 204 Query: 199 MAHASQNEKERL--RCFGENLGIIFQLADDLLDC 230 + EK L + +G FQ+ DD LDC Sbjct: 205 LMSGEDLEKHLLDVKDILIEMGTYFQVQDDYLDC 238 >gi|327350942|gb|EGE79799.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 405 Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 19/184 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR +T +V + + + +H SL+ DD+ D+ +RRG P H Sbjct: 107 GKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDV--EDSSNLRRGVPVAHN 164 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + I + N + A E + K+ NI + +L+L GQ +D+ Sbjct: 165 IFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHR---------GQGMDVFW 215 Query: 168 QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D T+ ++ + KTG L A + + A + +G+IFQ+ D Sbjct: 216 RDTLTCPTEEDYLEMVGNKTGGLFRLAIK----LMQAESDSGIDCVALVNLMGLIFQICD 271 Query: 226 DLLD 229 D L+ Sbjct: 272 DYLN 275 >gi|307328224|ref|ZP_07607402.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] gi|306886058|gb|EFN17066.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113] Length = 345 Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 17/152 (11%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL- 138 E H + HD + D +R G +D A++ G+ L A I++ Q Sbjct: 78 ELTHLATHYHDGV--RDETAVRPGARGPDANWDNTVAVLIGDFLFARASHILADLGPQAV 135 Query: 139 ---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195 + R Q+ + G + D +D +V +TGAL + Sbjct: 136 RLQAEAFRRQVTGQILETAGPR--------DGRDPVEHHLEVLA---GRTGALTAVSGRL 184 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 GA+++ A + + L +GE LG+ LAD+L Sbjct: 185 GALVSGADPSAVDALARYGERLGMASHLADEL 216 >gi|300431229|gb|ADK12004.1| farnesyl diphosphate synthase [Aralia elata] Length = 342 Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 24/213 (11%) Query: 34 QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86 Q +R+L Y + GGK R L+ E L + + +G IE + Y Sbjct: 33 QWVERMLD---YNVPGGKLNRGLSVIDSYKLLKEGKELSDDEIFLSSALGWCIEWLQAYF 89 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 L+ DD+ MD+ + RRG+P + +V I +G+L I K + Sbjct: 90 LVLDDI--MDSSHTRRGQPC-WFRLPKVGMIAVNDGILLRN-HIPRILKKHFRQKPYYVD 145 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCFACESGAI 198 +L L + + Q G QM+D+ + E + I + KT + + A+ Sbjct: 146 LLDLFNEVEFQTACG-QMIDLITTLVGEKDLSKYSLPIHRRIVQYKTAYYSFYLPVACAL 204 Query: 199 MAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230 + EK ++ +G FQ+ DD LDC Sbjct: 205 LMSGGDLEKHTNVKDILIEMGTYFQVQDDYLDC 237 >gi|261198611|ref|XP_002625707.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis SLH14081] gi|239594859|gb|EEQ77440.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis SLH14081] Length = 405 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 19/184 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR +T +V + + + +H SL+ DD+ D+ +RRG P H Sbjct: 107 GKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDV--EDSSNLRRGVPVAHN 164 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 + I + N + A E + K+ NI + +L+L GQ +D+ Sbjct: 165 IFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHR---------GQGMDVFW 215 Query: 168 QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D T+ ++ + KTG L A + + A + +G+IFQ+ D Sbjct: 216 RDTLTCPTEEDYLEMVGNKTGGLFRLAIK----LMQAESDSGIDCVALVNLMGLIFQICD 271 Query: 226 DLLD 229 D L+ Sbjct: 272 DYLN 275 >gi|56756931|gb|AAW26637.1| SJCHGC02430 protein [Schistosoma japonicum] Length = 386 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLP 93 + + Y L GK+IR LV +F + R +G +E +H L+ DD+ Sbjct: 45 NVVSYNLSSGKRIRGVLVVLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDI- 103 Query: 94 SMDNGYIRRGKPTVHI 109 +DN +RRG+P H+ Sbjct: 104 -IDNSTLRRGQPCWHL 118 >gi|83764459|dbj|BAE54603.1| unnamed protein product [Aspergillus oryzae] Length = 358 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L GK ++ N++ +A + + + SL+ DD+ D +RRG P Sbjct: 75 LPGKNTVGKVIESLRPWLNISDRSAAVLTDVMTMLQNSSLMLDDIE--DGSQLRRGAPAA 132 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H++Y I + TY II+ ++++ ++R + L+ LQ + GQ LD+ Sbjct: 133 HVKYGLSQTINS----TTY---IIAKVVSEVQTHLRLECAKVLSEE--LQTLTLGQALDL 183 Query: 168 QDEF------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 F ++E V + KTG I A+A+ N++ LR LG + Sbjct: 184 NWTFNKTCPSVNEYLVMI--DHKTGGFFRLMLRIMEIEANATPNDE--LRHLITLLGRYY 239 Query: 222 QLADDLLDCEED 233 Q+ DD + D Sbjct: 240 QIRDDYQNIASD 251 >gi|242212320|ref|XP_002471994.1| predicted protein [Postia placenta Mad-698-R] gi|220728918|gb|EED82802.1| predicted protein [Postia placenta Mad-698-R] Length = 327 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 22/216 (10%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTECASLFNVNHLTALRVGA 77 D L A H + + +D Y L GK +R ++ +V +G Sbjct: 17 DTLRYTLARHSEWRQSDEKSVLEPYTYLISHSGKDVRGQMINAFNEWLHVPKDQLAIIGR 76 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 + +H SL+ DD+ D+ +RRG P H Y I N + AF+ +S+ Sbjct: 77 IVGMLHNASLLVDDVE--DDSQLRRGNPVAHKIYGIPQVINTANYVYFQAFQEVSA---- 130 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLG---GQMLDI--QDEFI--DETQVFMIQKMKTGALMC 190 +++ H I + +L GQ LD+ +D E + + KTG L Sbjct: 131 ----LQASCDKYDLHTIVIDELLNLHRGQGLDLLWRDTLTCPSEQEYIAMVNNKTGGLFR 186 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 A +MA+A+ + +GI FQ+ DD Sbjct: 187 LAVR--LMMANATTSVGVDFIPLVNLIGIYFQIRDD 220 >gi|294882140|ref|XP_002769627.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC 50983] gi|239873179|gb|EER02345.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC 50983] Length = 377 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 14/171 (8%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 AL++ +E + + L DD+ MD+ RRGKP + + AI G L + + I Sbjct: 100 ALKLAWCVEILQSHFLTLDDV--MDSSSTRRGKPCWYTKVGVSNAINDGAFLYSTIYPFI 157 Query: 132 ---SSPKTQLKDNIR-----SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-MIQK 182 +S K L D I Q L H GM Q D + E + F I Sbjct: 158 RNIASHKEWLLDVIDIFAHIEQCTLIGQHLDVNGGMQQQQQQDSEHNKEKEIERFNTIAL 217 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDC 230 KT + S + A ++ + L + LG+ FQ DD LDC Sbjct: 218 YKTAFYTYYLPASVGVFASDDKDAVKYLPLIKDVCLKLGVYFQAQDDFLDC 268 >gi|46241300|gb|AAS82870.1| geranyl diphosphate synthase small subunit [Clarkia breweri] Length = 300 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%) Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQ---- 168 ++ G+G+L AFE++++ + D RS+ +L + I G +G+L G+ ++Q Sbjct: 126 LLTGDGMLPLAFELLANSEGA-GDESRSRRILRVIVEISKAAGSEGLLKGEYNELQLGRL 184 Query: 169 -----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 ++ D + + K G L A G I+ ++ E E+LR G +G+I Sbjct: 185 AGFTGGDWRDAFWMDHVCGKKEGGLHACAAACGGILGGGTEEEIEKLRKLGYLVGMI 241 >gi|170595477|ref|XP_001902397.1| Polyprenyl synthetase family protein [Brugia malayi] gi|158589952|gb|EDP28754.1| Polyprenyl synthetase family protein [Brugia malayi] Length = 334 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 49/200 (24%), Positives = 77/200 (38%), Gaps = 11/200 (5%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-----LTALRVGAAIECIHCYSLIHD 90 DR+ +++ GGK RS L+ E + A +E + + LI D Sbjct: 34 RDRIDKLFDHSVCGGKYKRSILLVEAYKALGGRQDEERMKMVTNIAACLELLQSFFLIED 93 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ MD G RRGKP H + + + +GLL ++ ++R + Sbjct: 94 DV--MDEGVNRRGKPCWH-RLEGIGINGINDGLLLDCMVSYILRSNRVSADVRDAFDEAR 150 Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 I L +L G ++D Q I + KT F A + A E + Sbjct: 151 RVTI-LGQILDGDTKSVEDCTWQRHQ--SITQHKTSHYTYFTPLQIAALLTAQPLIIEPV 207 Query: 211 RCFGENLGIIFQLADDLLDC 230 + LG +FQ DD +DC Sbjct: 208 KRIAYLLGYLFQSKDDYMDC 227 >gi|124358874|dbj|BAF45924.1| fusicoccadiene synthase [Phomopsis amygdali] gi|124358876|dbj|BAF45925.1| fusicoccadiene synthase [Phomopsis amygdali] Length = 719 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 41/192 (21%), Positives = 75/192 (39%), Gaps = 26/192 (13%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 A + K +R + V + ++ A+ +H SL+ DD DN +RRGKP Sbjct: 430 ASMPSKGVRDQFIDALNDWLRVPDVKVGKIKDAVRVLHNSSLLLDDF--QDNSPLRRGKP 487 Query: 106 TVHIQYDEVTAI-IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164 + H + + A ++ +I+ + + + +M+ + GQ Sbjct: 488 STHNIFGSAQTVNTATYSIIKAIGQIMEFSAGESVQEVMNSIMI----------LFQGQA 537 Query: 165 LDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER------LRCFG 214 +D+ E + + + KTG L A +++ +A+ NE R L Sbjct: 538 MDLFWTYNGHVPSEEEYYRMIDQKTGQLFSIAT---SLLLNAADNEIPRTKIQSCLHRLT 594 Query: 215 ENLGIIFQLADD 226 LG FQ+ DD Sbjct: 595 RLLGRCFQIRDD 606 >gi|315024113|gb|ADR83704.1| farnesyl pyrophosphate synthase [Alisma plantago-aquatica] Length = 343 Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 92/233 (39%), Gaps = 26/233 (11%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LTALR 74 +LL A + + + Y + GGK R V + L + Sbjct: 31 ELLEDPAFDFTDDAREWIEKMLDYNVPGGKLNRGLSVVDSYKLLKEGKELSEEELFLSCV 90 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +G IE + Y L+ DD+ MDN + RRG+P + +V I A +G++ I Sbjct: 91 LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPC-WFRIPKVGLIAANDGIILRN-HIPRML 146 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTG 186 + K +L L + + Q G QMLD+ ET + I + KT Sbjct: 147 QRHFKGKPYYVDLLDLFNEVEFQTACG-QMLDLITTHEGETDLSKYKLPVYKRIVQYKTA 205 Query: 187 ALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + AC +M+ + ++ ++ +G FQ+ DD LDC D PK Sbjct: 206 YYSFYLPVAC--ALLMSGENLDQFVDVKNILIEMGTYFQVQDDYLDCFGD-PK 255 >gi|260363971|ref|ZP_05776710.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus K5030] gi|308112584|gb|EFO50124.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus K5030] Length = 195 Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 36/71 (50%) Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q+++ D E + KT L A + GAI+ A ++ + L+ +G+ LG FQ Sbjct: 21 QLMNCNDPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQ 80 Query: 223 LADDLLDCEED 233 L DD++D D Sbjct: 81 LIDDVMDYTSD 91 >gi|126650453|ref|ZP_01722676.1| ComQ [Bacillus sp. B14905] gi|126592609|gb|EAZ86608.1| ComQ [Bacillus sp. B14905] Length = 297 Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust. Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 16/163 (9%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ AA+E + I DDL D+ P + + I+A + +FE Sbjct: 62 KIAAAVELVILSFDIIDDLQDKDSDNSWSRTPELSLNVALAMLIMASKTIDETSFE---- 117 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + +++ L+ + GQ LD+ + DE + +K+G+L +C Sbjct: 118 ---------HKRAAITILEECALKS-ISGQQLDLLNNCRDEDSYIHMITLKSGSLTAMSC 167 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 G ++A +++ + +G+ +GII Q+ +D+ + PK Sbjct: 168 LIGEVLAKGEVSKE--VEAYGKYIGIIQQIKNDIQSLKTWGPK 208 >gi|317140569|gb|ADV03674.1| farnesyl pyrophosphate synthase [Alisma orientale] Length = 343 Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 92/233 (39%), Gaps = 26/233 (11%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LTALR 74 +LL A + + + Y + GGK R V + L + Sbjct: 31 ELLEDPAFDFTDDAREWIEKMLDYNVPGGKLNRGLSVVDSYKLLKEGKELSEEELFLSCV 90 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +G IE + Y L+ DD+ MDN + RRG+P + +V I A +G++ I Sbjct: 91 LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPC-WFRIPKVGLIAANDGIILRN-HIPRML 146 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTG 186 + K +L L + + Q G QMLD+ ET + I + KT Sbjct: 147 QRHFKGKPYYVDLLDLFNEVEFQTACG-QMLDLITTHEGETDLSKYKLPVYKRIVQYKTA 205 Query: 187 ALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + AC +M+ + ++ ++ +G FQ+ DD LDC D PK Sbjct: 206 YYSFYLPVAC--ALLMSGENLDQFVDVKNILIEMGTYFQVQDDYLDCFGD-PK 255 >gi|320012344|gb|ADW07194.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331] Length = 374 Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 16/192 (8%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R L CA +A+ A+E +H +SL+HDD+ MD RR + TV Sbjct: 85 GKGVRQALAVLCAEAAGAPPDSAVAAAVAVELVHTFSLLHDDI--MDGDGTRRQRETVWK 142 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 Y A++AG+ LL A + ++ L +L +L+ G+ GQ D+ Sbjct: 143 AYGTGPAVLAGDALLALAVQTLAEAPGPLTAVAVGRLSETLS------GLARGQAEDLLL 196 Query: 168 ------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + + + ++KTG L+ A G ++ A + L G +LG+ F Sbjct: 197 AARPWTGPGAVRTDEYRAMAELKTGTLLGCAAALGGLLGGAPEPVVAALDRAGRHLGVAF 256 Query: 222 QLADDLLDCEED 233 Q DDLL D Sbjct: 257 QAVDDLLGIWGD 268 >gi|322818356|gb|EFZ25796.1| polyprenyl synthase, putative [Trypanosoma cruzi] Length = 222 Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 30/55 (54%) Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E V I KTGA+ C I+ AS+ + + + FG+ +G+ +Q+ DD+L Sbjct: 58 EDAVKFIHTCKTGAICGAICSFACILTDASEEDTQAMEEFGKAIGLAYQIIDDVL 112 >gi|225678401|gb|EEH16685.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides brasiliensis Pb03] Length = 407 Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 13/181 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR L+ +V + + + +H SL+ DD+ D+ +RRG P H Sbjct: 107 GKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLVDDV--EDSSNLRRGVPVAHN 164 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I + N + A E + + ++ + +L+L G+ + + Sbjct: 165 IFGTAQTINSANYVYFLALEEVQKLRNPNAIDVYVKELLNLHRGQGMDVFWRDTLTCPTE 224 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +E++D M+ KTG L A + +M S E + + +G+IFQ+ DD L Sbjct: 225 EEYLD-----MVGN-KTGGLFRLAIK---LMQAESGTEIDCV-ALANLMGLIFQICDDYL 274 Query: 229 D 229 + Sbjct: 275 N 275 >gi|322796022|gb|EFZ18646.1| hypothetical protein SINV_13860 [Solenopsis invicta] Length = 77 Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113 NV T ++ E IH SL+HDD+ +D IRRGKP+V++ + + Sbjct: 30 NVLLQTQRQIAMIAEMIHSASLLHDDV--IDQSDIRRGKPSVNVMWSQ 75 >gi|322794010|gb|EFZ17248.1| hypothetical protein SINV_11878 [Solenopsis invicta] Length = 354 Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 25/208 (12%) Query: 42 AIRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPS 94 + Y + GKKIR L+ SL + LT A + +E + Y L+ DD+ Sbjct: 48 VLEYNVPNGKKIRGLTLICVYKSLVPNDQLTEDNIRLAQILAWCVEMMQAYLLVLDDI-- 105 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNG-LLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 D RRG+P H +Y+ + +G LL A I Q K+ S L T Sbjct: 106 QDQSLFRRGQPCWH-RYNNIGEAAVNDGVLLESAMYYILRKHFQGKE---SYCNLVETFQ 161 Query: 154 IGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKT-----GALMCFACESGAIMAHASQN 205 + L GQ LD+ D+ +F + ++ + A + A M A Sbjct: 162 DAIFKTLMGQCLDLNSTNFDKKPNLNLFTMDRLNSVIKFKTAHYTYVLPIIAAMHLAGIK 221 Query: 206 EKE---RLRCFGENLGIIFQLADDLLDC 230 + E + + +G +FQ+ DD LDC Sbjct: 222 DSEMFNQAQAILLEIGRLFQVQDDYLDC 249 >gi|18307877|gb|AAL67733.1|AF456136_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. subtilis str. 168] Length = 289 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%) Query: 65 FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F+ +TA+ + A+ IE + + I DD+ DN ++ D I A L Sbjct: 41 FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATAL 94 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 T + ++IS L N L L+L + LQ L GQ D+ E++ + K+ Sbjct: 95 YTLSLQVIS-----LVSNNPQHLSLTLQY--SLQS-LQGQHEDLNVTISSESEYIEMIKL 146 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 K+G+L+ G +A N E + + LGI+ Q+A+D Sbjct: 147 KSGSLVTLPSVLGVYLATGEIN--ETVEEYSRYLGIVEQIAND 187 >gi|229543109|ref|ZP_04432169.1| Geranylgeranyl pyrophosphate synthase-like protein [Bacillus coagulans 36D1] gi|229327529|gb|EEN93204.1| Geranylgeranyl pyrophosphate synthase-like protein [Bacillus coagulans 36D1] Length = 289 Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 GQ DI++ + E + + K K+GAL AC GA++A + + + + +GI Sbjct: 113 GQFADIRNAPLKEEEYIAVIKQKSGALCALACLCGAMLA-GNTTDLHLIGEYATGIGICA 171 Query: 222 QLADDLLD 229 QL +DL D Sbjct: 172 QLENDLDD 179 >gi|118088191|ref|XP_424685.2| PREDICTED: similar to geranylgeranyl diphosphate synthase [Gallus gallus] Length = 420 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 19/181 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK++R+ L NV + E +H SL+ DD+ DN +RRG P H Sbjct: 144 GKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDI--EDNSKLRRGFPVAHS 201 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 Y + I N + E + + + ++ +L L GQ LDI Sbjct: 202 IYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHK---------GQGLDIYW 252 Query: 168 QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D + E + + KTG L A +M S N K+ L+ LG+ FQ+ D Sbjct: 253 RDTYTCPTEAEYKAMVLQKTGGLFGLAV---GLMQLFS-NYKKDLKPLLNTLGLFFQIRD 308 Query: 226 D 226 D Sbjct: 309 D 309 >gi|269103559|ref|ZP_06156256.1| putative octaprenyl-diphosphate synthase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163457|gb|EEZ41953.1| putative octaprenyl-diphosphate synthase [Photobacterium damselae subsp. damselae CIP 102761] Length = 189 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 +S N+ +G + Q+++ D E + KT L A + AI+A AS + Sbjct: 1 MSAATNVIAEGEVQ-QLMNCNDPDTTEESYMEVIYSKTARLFEAATQVAAIIAKASPEVE 59 Query: 208 ERLRCFGENLGIIFQLADDLLD 229 + +G LG FQL DD+LD Sbjct: 60 TAFQDYGRYLGTAFQLIDDVLD 81 >gi|328767086|gb|EGF77137.1| hypothetical protein BATDEDRAFT_14267 [Batrachochytrium dendrobatidis JAM81] Length = 290 Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust. Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 27/191 (14%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 G++IR+ L+ F V + + +H SL+ DD+ D +RRG P H Sbjct: 14 GQEIRNLLIEGFQKWFQVPTEKLAIIKQVVAMLHTASLLVDDVE--DGSDLRRGVPVTHK 71 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 + + I A N YA+ I LKD +++ + T + L + G + +D Sbjct: 72 IFGVASTINAAN----YAYFIALENVLMLKD---VRIVQAFTEELQLLHLGQGMEIHWRD 124 Query: 170 EFI--DETQVFMIQKMKTGAL-------MCFACESGAIMAHASQNEKERLRCFGENLGII 220 + E+ + + KTG L M ES A + + +G+ Sbjct: 125 TVVCPSESDYLKMVENKTGGLLRLGVRMMQLDIESPAALEYIK---------LVNLIGVF 175 Query: 221 FQLADDLLDCE 231 +Q+ DD L+ + Sbjct: 176 YQVRDDYLNLK 186 >gi|242774766|ref|XP_002478507.1| geranylgeranyl diphosphate synthase [Talaromyces stipitatus ATCC 10500] gi|218722126|gb|EED21544.1| geranylgeranyl diphosphate synthase [Talaromyces stipitatus ATCC 10500] Length = 392 Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust. Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 13/181 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR ++ + V + + + +H SL+ DD+ DN +RRG P H Sbjct: 100 GKDIRKQMIAAFNAWLKVPESSLAIITKVVAMLHNASLLIDDVE--DNSVLRRGIPVAHN 157 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I + N + A + + + +I ++ +L+L G+ + + Sbjct: 158 IFGTAQTINSANYVYFLALQEVRKLNSVTAMDIYTEELLNLHKGQGMDLFWRDTLTCPTE 217 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 +E+++ M+ KTG L A + + A + +G+IFQ+ DD L Sbjct: 218 EEYLE-----MVDN-KTGGLFRLAVK----LMQAESDTGRDCVPLVNVMGLIFQICDDYL 267 Query: 229 D 229 + Sbjct: 268 N 268 >gi|290976635|ref|XP_002671045.1| predicted protein [Naegleria gruberi] gi|284084610|gb|EFC38301.1| predicted protein [Naegleria gruberi] Length = 226 Score = 36.6 bits (83), Expect = 2.8, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK RS L+ F ++ + + I+ +H SL+ DD+ DN +RRGKP H Sbjct: 30 NGKGFRSKLIDAFNEWFKLSEDELNVIKSIIDKLHNASLLVDDIE--DNSKLRRGKPCAH 87 Query: 109 IQYDEVTAIIAGN 121 + Y I N Sbjct: 88 LIYGTPATINCAN 100 >gi|169829787|ref|YP_001699945.1| transcriptional regulator of comG and srfA [Lysinibacillus sphaericus C3-41] gi|168994275|gb|ACA41815.1| transcriptional regulator of comG and srfA [Lysinibacillus sphaericus C3-41] Length = 297 Score = 36.6 bits (83), Expect = 2.8, Method: Compositional matrix adjust. Identities = 34/163 (20%), Positives = 69/163 (42%), Gaps = 16/163 (9%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ AA+E + I DDL D+ P + + I+A + +FE Sbjct: 62 KIAAAVELLILSFDIIDDLQDKDSDNSWSRTPELSLNVALAMLIMASKTIDETSFE---- 117 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + + + L+ + GQ LD+ + DE + +K+G+L +C Sbjct: 118 ---------HKRAAIKILEECALKS-ISGQQLDLLNNCRDEDSYVQMITLKSGSLTAMSC 167 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 G ++A +++ + +G+ +GII Q+ +D+ + PK Sbjct: 168 LIGEVLAKGEVSQE--VEAYGKYIGIIQQIKNDIQSLKAWGPK 208 >gi|256084091|ref|XP_002578266.1| dimethylallyltransferase; farnesyl pyrophosphate synthase; geranyltranstransferase [Schistosoma mansoni] gi|238663632|emb|CAZ34504.1| dimethylallyltransferase [Schistosoma mansoni] Length = 401 Score = 36.6 bits (83), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%) Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDN 97 Y L GK+IR LV +F+ + + + +G +E +H L+ DD+ +DN Sbjct: 49 YNLSSGKRIRGVLVVLSYMVFSNKNENSRKNLSCVYLIGWCVELLHAGFLVLDDI--IDN 106 Query: 98 GYIRRGKPTVH-IQYDEVTAIIAGN 121 +RRG+P H Q D +I N Sbjct: 107 STLRRGQPCWHCTQIDSNRGLIGVN 131 >gi|317137331|ref|XP_001727659.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40] Length = 371 Score = 36.6 bits (83), Expect = 2.9, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 21/195 (10%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 +L+ Y A L K +R + V T + + +H SL+ DDL D Sbjct: 76 VLAPYNYIAGLPSKNVREIFIQGIHIWIQVPQPTLESIKSITNILHQSSLMFDDLE--DE 133 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKP H+ Y I + YA S +L + +++ + LQ Sbjct: 134 SQLRRGKPATHMLYGPAQTINSA----VYALVNTFSEVQRLDSSETTEIFID-----ELQ 184 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQ-KMKTGAL--MCFACESGAIMAHASQNEKERLR 211 + GQ D+ ++ I + +M+ KTG L +C ++ E L Sbjct: 185 NLHCGQSFDLYWKYHGHIPTVEEYMMMIDHKTGGLFRLCVRLMQAKSISSGPHLE---LT 241 Query: 212 CFGENLGIIFQLADD 226 F LG FQ+ DD Sbjct: 242 HFVSLLGRFFQIRDD 256 >gi|238499299|ref|XP_002380884.1| geranyl geranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] gi|220692637|gb|EED48983.1| geranyl geranyl pyrophosphate synthase, putative [Aspergillus flavus NRRL3357] Length = 273 Score = 36.6 bits (83), Expect = 2.9, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 75/190 (39%), Gaps = 23/190 (12%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IRS L+ V + + I+ +H SL+ DD+ D+ +RRG P H Sbjct: 16 GKDIRSKLIDAFNEFLEVPNDKLDVIKRIIDLLHNASLLIDDI--QDSSTLRRGVPVAHS 73 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKD----NIRSQLMLSLTHNIGLQGMLGGQML 165 + V I L YA+ + T L + +I ++ +L L G++ L Sbjct: 74 IFGVVQII----NLANYAYFVAQRELTNLTNPLSLSIYTEELLHLHRGQGME-------L 122 Query: 166 DIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 +D E + + KTG L A + A E LG++FQ+ Sbjct: 123 HWRDTLQCPSEEEYIEMALDKTGGLFRLAIR----LMQAESASGTDYVPLVETLGLLFQI 178 Query: 224 ADDLLDCEED 233 DD + + D Sbjct: 179 RDDYQNLQSD 188 >gi|83770687|dbj|BAE60820.1| unnamed protein product [Aspergillus oryzae] Length = 362 Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 21/195 (10%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 +L+ Y A L K +R + V T + + +H SL+ DDL D Sbjct: 67 VLAPYNYIAGLPSKNVREIFIQGIHIWIQVPQPTLESIKSITNILHQSSLMFDDLE--DE 124 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGKP H+ Y I + YA S +L + +++ + LQ Sbjct: 125 SQLRRGKPATHMLYGPAQTINSA----VYALVNTFSEVQRLDSSETTEIFID-----ELQ 175 Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQ-KMKTGAL--MCFACESGAIMAHASQNEKERLR 211 + GQ D+ ++ I + +M+ KTG L +C ++ E L Sbjct: 176 NLHCGQSFDLYWKYHGHIPTVEEYMMMIDHKTGGLFRLCVRLMQAKSISSGPHLE---LT 232 Query: 212 CFGENLGIIFQLADD 226 F LG FQ+ DD Sbjct: 233 HFVSLLGRFFQIRDD 247 >gi|325185255|emb|CCA19743.1| unnamed protein product [Albugo laibachii Nc14] Length = 293 Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L GK IR LV NV T+ + + +H SL+ DD+ DN +RRG+P Sbjct: 19 LPGKNIRGKLVDAFQLWLNVAPGTSKAIKTIVNGLHDASLLIDDIE--DNSDLRRGRPVA 76 Query: 108 HIQY 111 H Y Sbjct: 77 HHIY 80 >gi|55710092|gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica] Length = 342 Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 87/225 (38%), Gaps = 21/225 (9%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALR 74 DLL A + + Y + GGK R L+ E L + + + Sbjct: 18 DLLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKEGKELSDDEIVLSSA 77 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +G IE + Y L+ DD+ MD + RRG+P + +V I +G+L I Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDGSHTRRGQPC-WFRIPKVGMIAINDGILLRN-HIPRIL 133 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTG 186 K + +L L + + Q G QM+D+ + E + I + KT Sbjct: 134 KKHFRQKPYYVDLLDLFNEVEFQTACG-QMIDLITTLVGEKDLSKYSLPIHRRIVQYKTA 192 Query: 187 ALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230 + + A++ EK ++ +G FQ+ DD LDC Sbjct: 193 YYSFYLPVACALLMAGEDLEKHTNVKDILIEMGTYFQVQDDYLDC 237 >gi|302543684|ref|ZP_07296026.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302461302|gb|EFL24395.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length = 86 Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 44 RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 RYALL GK +R L+ E A + +L +E +H SL+HDD Sbjct: 38 RYALLPAGKLLRPLLLVESARAVGGGYEESLPAALGVEYLHAGSLVHDD 86 >gi|215480227|gb|ACJ67458.1| quorum sensing protein [Bacillus subtilis] gi|215480229|gb|ACJ67459.1| quorum sensing protein [Bacillus subtilis] Length = 272 Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A IE + I+DDL DNG V ++ D A+ A L T + +++S Sbjct: 52 LAAGIELLILSFDIYDDLEDQDNG------SAVWMKIDSSIALNAVTALYTLSIQVMSQA 105 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 + + SQ +L N LQ + GQ DI + E + K K+GAL C Sbjct: 106 SHEPE---FSQEIL----NFALQS-IQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCV 157 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 G ++A + + + LGII Q+ +D Sbjct: 158 MGVMLATGKYH--PIVASYSYELGIIAQIEND 187 >gi|198436974|ref|XP_002128313.1| PREDICTED: similar to farnesyl pyrophosphate synthetase [Ciona intestinalis] Length = 348 Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 85/215 (39%), Gaps = 25/215 (11%) Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHD 90 +R+ + Y GK+ R V + ++ AL +G A+E + L+ D Sbjct: 38 ERIKDLLEYNAPHGKRTRGLTVVAAFKTIAGDGISEDEMKLALTMGWAVEILQASFLVAD 97 Query: 91 DLPSMDNGYIRRGKPTVHIQYDE-VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DL MD RRG+ ++ + A+ G L T F +I + K + Sbjct: 98 DL--MDQSKTRRGQACWYLNPNVGYQAVNDGMILETCVFTLI---RQHCKGKAFYADIFD 152 Query: 150 LTHNIGLQGMLGGQMLDIQDE--------FIDETQVFMIQKMKTGALMCFACESGAIMAH 201 L H + L ++G Q LD++ ET+ I K KT A F Sbjct: 153 LFHKVILNTLMG-QSLDMEASEQPTVDFTLFTETKHAAIIKYKT-AFYSFYLPVAIAFYM 210 Query: 202 ASQNEKE--RLRC-FGENLGIIFQLADDLLDCEED 233 A N+++ C +G +FQ+ DD LDC D Sbjct: 211 AGINDEQCHTAACDILTKIGCLFQIQDDYLDCYGD 245 >gi|38684029|gb|AAR27053.1| farnesyl diphosphate synthetase [Ginkgo biloba] Length = 390 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 29/209 (13%) Query: 45 YALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDN 97 Y + GGK R V + L +G IE + Y L+ DD+ MD Sbjct: 89 YTVPGGKLNRGLSVIDSYRLLKTGKEITEDEVFLGCVLGWCIEWLQAYFLVLDDI--MDG 146 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 + RRG+P + +V I A +G+L T+ I+ K + + L + + Sbjct: 147 SHTRRGQP-CWFRLPQVGLIAANDGILLRTHISRIL---KLHFQTKPYYVDLCDLFNEVE 202 Query: 156 LQGMLGGQMLDI---QDEFIDETQVFM-----IQKMKTGALMCF---ACESGAIMAHASQ 204 Q GQMLD+ + ID + M I + KT + AC +MA + Sbjct: 203 FQ-TASGQMLDLITTHEGAIDLAKYKMPTYLRIVQYKTAYYSFYLPVAC--ALLMAGENL 259 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ +G FQ+ DD LDC D Sbjct: 260 DNFVAVKNILVQMGTYFQVQDDYLDCFGD 288 >gi|313636097|gb|EFS01975.1| polyprenyl synthetase [Listeria seeligeri FSL S4-171] Length = 157 Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 25/46 (54%) Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT L +C SGA + AS+ + G LG+ FQ+ DD+LD Sbjct: 6 KTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIIDDVLD 51 >gi|300707872|ref|XP_002996129.1| hypothetical protein NCER_100832 [Nosema ceranae BRL01] gi|239605400|gb|EEQ82458.1| hypothetical protein NCER_100832 [Nosema ceranae BRL01] Length = 305 Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 10/77 (12%) Query: 38 RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHDDL 92 ++ I Y + GGK +R +++ N + L L VG +E H ++ DD+ Sbjct: 25 KIFEMINYNISGGKNVRFDILSHVT---NNSKLCVLEEDKFLVGFCMELFHASFILSDDI 81 Query: 93 PSMDNGYIRRGKPTVHI 109 +DN IRR KP H+ Sbjct: 82 --VDNSLIRRNKPCFHL 96 >gi|294658024|ref|XP_460338.2| DEHA2E23870p [Debaryomyces hansenii CBS767] gi|199433130|emb|CAG88623.2| DEHA2E23870p [Debaryomyces hansenii] Length = 346 Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 81/221 (36%), Gaps = 30/221 (13%) Query: 35 HNDRLLSAIR--YALLGG-----KKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCY 85 HND + I Y L G IR+ + L+ +H ++G I H Sbjct: 15 HNDEIPKCISEPYDYLEGIPSNNNNIRATFLNAFNDLYYQIEDHKLLDKIGEIISIFHNS 74 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-- 143 SL+ DD+ D+ RRG PT H Y I GN + A + + + I Sbjct: 75 SLLIDDIE--DDSSFRRGLPTAHTLYGTPLTINCGNLMYFIALQKAQNELPMYYNKIHDG 132 Query: 144 -----------SQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 SQ+ ML+L H GL IQ+ + + + KTG L Sbjct: 133 DVDVKSLTYQISQILVDEMLNLHHGQGLDIYWRDSGDYIQNHLPEIDEYLKMVMNKTGGL 192 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 F + + + + LGII+Q+ DD L+ Sbjct: 193 --FRLSVKLLEVFSPTFKSTSVIPLANLLGIIYQIRDDYLN 231 >gi|119494797|ref|XP_001264204.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] gi|119412366|gb|EAW22307.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL 181] Length = 397 Score = 36.2 bits (82), Expect = 3.7, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 20/193 (10%) Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 A + GK+IR L+ + V+ + A + H SL+ DD+ D+ +RRG P Sbjct: 115 AGIPGKEIRRKLLEAFNHWYKVDEQPCQAIAATVGMAHNASLLIDDI--QDSSKLRRGVP 172 Query: 106 TVHIQYDEVTAIIAGNGLLTYA----FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 H Y I + N + A F + + P+ ++ ++ M++L G++ Sbjct: 173 CAHEVYGVAQTINSANYVYFLAQDQLFRLRNWPQAI---SVFNEEMVNLHRGQGMELFWR 229 Query: 162 GQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 +L D+++ MI KTG L A + S + + LG+ Sbjct: 230 DNLLPPSMDDYLQ-----MIAN-KTGGLFRMAVR----LLQTSSRHVVDVEQLVDVLGLY 279 Query: 221 FQLADDLLDCEED 233 FQ+ DD + +E+ Sbjct: 280 FQILDDYKNVKEE 292 >gi|119490120|ref|XP_001262975.1| polyprenyl synthetase, putative [Neosartorya fischeri NRRL 181] gi|119411135|gb|EAW21078.1| polyprenyl synthetase, putative [Neosartorya fischeri NRRL 181] Length = 668 Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + K R L+ + FNV + + + +H SL+ DD+ D +RRGKP V Sbjct: 398 MPSKGFRHHLIDALQTWFNVPERSLMLISGVASLLHEASLMLDDI--QDGSLLRRGKPAV 455 Query: 108 H 108 H Sbjct: 456 H 456 >gi|313619071|gb|EFR90878.1| geranyltranstransferase [Listeria innocua FSL S4-378] Length = 94 Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust. Identities = 16/31 (51%), Positives = 22/31 (70%) Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +RLR F EN+GI FQ++DD+LD D K Sbjct: 2 QTKRLRIFAENIGIGFQISDDILDVIGDETK 32 >gi|154509178|ref|ZP_02044820.1| hypothetical protein ACTODO_01699 [Actinomyces odontolyticus ATCC 17982] gi|153798812|gb|EDN81232.1| hypothetical protein ACTODO_01699 [Actinomyces odontolyticus ATCC 17982] Length = 367 Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%) Query: 42 AIRYALLGGKKIRSFLV---TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 A+ ++ GGK+ R+ + +S +V ++ + AA+E +L+HDD+ +D Sbjct: 41 AVLASVSGGKRFRALMAHVGYALSSGTSVEEVSLPHLSAALELYQASALVHDDI--IDKA 98 Query: 99 YIRRGKPTVH 108 RRG PT H Sbjct: 99 DERRGMPTPH 108 >gi|62288319|gb|AAX78435.1| farnesyl diphosphate synthase [Dendroctonus jeffreyi] Length = 429 Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 92/244 (37%), Gaps = 29/244 (11%) Query: 10 QENSKRIDTILDDLL--LQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLF 65 +E S+ + DL+ L Q H+ R ++Y GKK R ++ + Sbjct: 87 KEQSRDFMALFPDLVRELTEVGKSQELHDVMRRFARVLQYNTPTGKKNRGLIILSTYRML 146 Query: 66 -NVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 + LT + G E +H Y LI DD+ MD RRG Q + Sbjct: 147 EDPEKLTPENIRLASILGWCAEMVHAYVLILDDI--MDGSETRRGALCWFRQSG--IGLT 202 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---------QD 169 A N + + K LKD+ ++ L H L+ LG Q LD + Sbjct: 203 AVNDAVMIENAVYLLIKRHLKDHPMYVPLMELFHEGNLKTTLG-QSLDAMCLDTNGKPKL 261 Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR---CFGENLGIIFQLADD 226 + ++ I K KT A F M A +++E+ R +G FQ+ DD Sbjct: 262 DMFTMSRYTSIVKYKT-AFYSFQMPVAIAMYLAGMSDEEQHRQAKTILMEMGQFFQIQDD 320 Query: 227 LLDC 230 LDC Sbjct: 321 FLDC 324 >gi|282158091|ref|NP_001164089.1| farnesyl pyrophosphate synthase [Tribolium castaneum] Length = 425 Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 24/211 (11%) Query: 38 RLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRV------GAAIECIHCYSLIHD 90 R A+ Y + GKK R V + +LT + G +E + + L+ D Sbjct: 116 RYAKALHYNVPNGKKNRGLAVIAAYKMLEKEENLTPENIRLANIMGWCVELLQGFFLVTD 175 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ +D +RRG P + + D T + A N + I + K + + L Sbjct: 176 DI--IDRSEMRRGMPCWYKKDD--TGLNAFNDAILLEHGIYTLLKRHFSQHHCYVPTMEL 231 Query: 151 THNIGLQGMLGGQMLDI---QD-----EFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202 H++ L+ +G Q LD +D E + I K KT A F M A Sbjct: 232 FHDVTLKTSMG-QALDCLCNKDGKPNLELFTMNKYNSIVKYKT-AYYTFQLPVALAMYMA 289 Query: 203 SQNEKE---RLRCFGENLGIIFQLADDLLDC 230 + + E + + +G+ FQ+ DD LDC Sbjct: 290 NLYDPEMHRQAKTILMEMGLFFQIQDDFLDC 320 >gi|146319409|ref|YP_001199121.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] gi|145690215|gb|ABP90721.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] Length = 168 Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 28/51 (54%) Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 KT L AC+ G+ + S+ + G+ LG+ FQL DDL+D + D+ Sbjct: 18 KTAFLFGLACQLGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDV 68 >gi|311069671|ref|YP_003974594.1| isoprenyl-trasferase [Bacillus atrophaeus 1942] gi|310870188|gb|ADP33663.1| isoprenyl-trasferase [Bacillus atrophaeus 1942] Length = 289 Score = 35.8 bits (81), Expect = 4.5, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 16/152 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + + IE + + I DD+ DN ++ D I A L T + ++IS Sbjct: 52 LASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATALYTLSLQVISLV 105 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 + LSLT LQ L GQ +D+ E++ + K+K+G+L+ Sbjct: 106 SNNPQ-------HLSLTLQYSLQS-LQGQHVDLTLTVSSESEFIEMIKLKSGSLVTLPSV 157 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 G +A N E + + LGI+ Q+A+D Sbjct: 158 LGVYLATGEFN--ETVDEYSHYLGIVEQIAND 187 >gi|18307881|gb|AAL67736.1|AF456137_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. subtilis str. 168] Length = 289 Score = 35.8 bits (81), Expect = 4.5, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%) Query: 65 FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F+ +TA+ + A+ IE + + I DD+ DN ++ D I A L Sbjct: 41 FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATAL 94 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 T + ++IS L N L ++L + LQ L GQ D+ E++ + K+ Sbjct: 95 YTLSLQVIS-----LVSNNPQHLSMTLQY--SLQS-LQGQHEDLNVTISSESEYIEMIKL 146 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 K+G+L+ G +A N E + + LGI+ Q+A+D Sbjct: 147 KSGSLVTLPSVLGVYLATGEIN--ETVEEYSRYLGIVEQIAND 187 >gi|169763336|ref|XP_001727568.1| farnesyltranstransferase [Aspergillus oryzae RIB40] gi|238489227|ref|XP_002375851.1| geranylgeranyl diphosphate synthase [Aspergillus flavus NRRL3357] gi|83770596|dbj|BAE60729.1| unnamed protein product [Aspergillus oryzae] gi|220698239|gb|EED54579.1| geranylgeranyl diphosphate synthase [Aspergillus flavus NRRL3357] Length = 389 Score = 35.8 bits (81), Expect = 4.7, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 19/184 (10%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR L+ V + + + +H SL+ DD+ D +RRG P H Sbjct: 97 GKDIRRQLINAFNEWLKVPAESLAIITKVVTMLHTASLLIDDVE--DCSILRRGAPVAHN 154 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167 Y I + N + A + + +I Q +L+L GQ +D+ Sbjct: 155 IYGTAQTINSANYVYFLALQEVQKLNNPAAIDIYVQELLNLHR---------GQGMDLFW 205 Query: 168 QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 +D E + + KTG L A + +M S K+ + LG+IFQ+ D Sbjct: 206 RDTLTCPSEEEYLEMVGNKTGGLFRLAIK---LMQAESATGKDCVSLVNV-LGLIFQICD 261 Query: 226 DLLD 229 D L+ Sbjct: 262 DYLN 265 >gi|157111697|ref|XP_001651688.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti] gi|108878318|gb|EAT42543.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti] Length = 289 Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + GK+ RS + NV ++VG I+ +H SL+ DD+ D+ +RRG P Sbjct: 12 IPGKQFRSRMAVALDHWLNVPFDKMVKVGEIIQLLHNGSLLIDDI--QDSSVLRRGVPAA 69 Query: 108 H 108 H Sbjct: 70 H 70 >gi|219122674|ref|XP_002181666.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406942|gb|EEC46880.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 330 Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust. Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 21/214 (9%) Query: 27 TASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTAL--RVGAAIECIH 83 A + Q + LL A RY + GK +R L+ +C L+ T + + + +H Sbjct: 13 VAPLLPHQSDPSLLEAFRYINSVPGKDVRGKLI-DCFQLWLKVESTEILDSIKDIVGDLH 71 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 SL+ DD+ DN +RRG P H + I N + A E + + + + Sbjct: 72 NASLLIDDIE--DNSKLRRGNPVAHSIFGIPQVINCSNYVYFLALEKVHALNSPTAMQVF 129 Query: 144 SQLMLSL----THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 +L+L H+I + + E + + + KTG L A G + Sbjct: 130 VGELLNLHRGQGHDIAWRDSIRCPT---------EGEYLTMVQDKTGGLFRLAV--GLMQ 178 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A+ + NL + FQ+ DD ++ ++ Sbjct: 179 CFATTHRDTDFSNLVNNLAMYFQIRDDFINLADE 212 >gi|322693895|gb|EFY85740.1| geranylgeranyl pyrophosphate synthetase AtmG [Metarhizium acridum CQMa 102] Length = 331 Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 39/198 (19%) Query: 48 LGGKKIRSFLVTECASLFN------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 L GK +RS ++ S FN V+ L ++ I +H SL+ DD+ D+ +R Sbjct: 50 LPGKDVRSKMI----SAFNEWLCIPVDKLEVIK--RIIMLLHNASLLIDDI--QDSSKLR 101 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD----NIRSQLMLSLTHNIGLQ 157 RG P H + I A N YA+ + +L D I ++ +LSL Sbjct: 102 RGLPVSHHIFGVPQTINAAN----YAYFLAQQELPKLGDPKAFEIYTEELLSLHR----- 152 Query: 158 GMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GQ +DI + E + F + KTG L A +M AS + + Sbjct: 153 ----GQGMDIYWREASKCPTEEEYFSMVSHKTGGLFRLAIR---LMQLASDKNCDFVPLV 205 Query: 214 GENLGIIFQLADDLLDCE 231 LG+IFQ+ DD L+ + Sbjct: 206 NV-LGVIFQIRDDYLNLQ 222 >gi|299756412|ref|XP_001829313.2| trans-hexaprenyltranstransferase [Coprinopsis cinerea okayama7#130] gi|298411665|gb|EAU92273.2| trans-hexaprenyltranstransferase [Coprinopsis cinerea okayama7#130] Length = 479 Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 35/178 (19%) Query: 71 TALRVGAAIECIHCYSLIHDDL------PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 T +R+ +E IH L+H ++ PS D+ + +I+ G+ LL Sbjct: 222 TQMRLAQIVEMIHVALLLHQNISDASKSPSSDS----------QNPFGNKLSILGGDFLL 271 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---------DET 175 A ++S L +L+ S+ N+ LG M +Q + +E Sbjct: 272 GRASTVLS----HLGGGEVVELIASVISNLVEGEFLG--MDKVQTPGLGVMEGPRTREEA 325 Query: 176 QVFMIQK--MKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLD 229 ++K +K+ +LM + ++ +NE KE +G +LGI +QL +D LD Sbjct: 326 WDLYLRKTYLKSASLMAKGARASVVLGGCGENEVWKEVAYAYGRSLGIAYQLIEDTLD 383 >gi|157693593|ref|YP_001488055.1| hypothetical protein BPUM_2840 [Bacillus pumilus SAFR-032] gi|157682351|gb|ABV63495.1| hypothetical protein BPUM_2840 [Bacillus pumilus SAFR-032] Length = 307 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 20/157 (12%) Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ A IE + + I DD+ D + P + Q A+ A N L +F + S Sbjct: 64 QLAAGIELLILSADILDDIEDQD----KDSYPWMRCQ--SGVAMNAANVLFALSFGVFSK 117 Query: 134 --PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 T+L +++ S + S+ GQ LD+ E +E I ++K G+L Sbjct: 118 LDHATELINSVYSYSIQSMQ----------GQHLDMTVEPENEQDCLNIMRLKAGSLFVL 167 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 C G I+A S +K + + LG+ QL +D L Sbjct: 168 PCMLGVILATGSFEKK--VEEYAYYLGMAEQLENDYL 202 >gi|221132081|ref|XP_002160031.1| PREDICTED: similar to farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Hydra magnipapillata] Length = 477 Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 9/100 (9%) Query: 16 IDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT--- 71 + I+ +L+ A + Q T+ L A+ Y GKK R +V ++T Sbjct: 147 FENIIKELVEVDAQNPQITEAAHSLRDALSYNAFDGKKSRGMMVICSLDFLKNGNVTNSE 206 Query: 72 ---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 AL +G +E + L+ DD+ MD IRRGKP + Sbjct: 207 VDKALCLGWCVEILQAVFLVADDI--MDRSEIRRGKPCWY 244 >gi|154271672|ref|XP_001536689.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces capsulatus NAm1] gi|150409359|gb|EDN04809.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces capsulatus NAm1] Length = 375 Score = 35.4 bits (80), Expect = 5.9, Method: Compositional matrix adjust. Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 13/181 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +R + +V + + + +H SL+ DD+ D+ +RRG P H Sbjct: 79 GKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLVDDVE--DSSTLRRGVPVAHN 136 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I + N + A E + K+ NI + +L+L G+ + + Sbjct: 137 IFGTAQTINSANYVYFLALEEVQKLKSPNVINIYVKELLNLHRGQGMDVFWRDTLTCPTE 196 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D++++ M+ KTG L A + + A + +G+IFQ+ DD L Sbjct: 197 DDYLE-----MVGN-KTGGLFRLAIK----LMQAESDTGIDCVTLVNLMGLIFQICDDYL 246 Query: 229 D 229 + Sbjct: 247 N 247 >gi|310792468|gb|EFQ27995.1| polyprenyl synthetase [Glomerella graminicola M1.001] Length = 377 Score = 35.4 bits (80), Expect = 6.0, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 21/142 (14%) Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECAS------LFNVNHLTALRVGAAIECIHCYSLIH 89 NDR ++ LGGK R V + S L + A +G E + + L+ Sbjct: 67 NDR--CSLEINTLGGKCNRGMSVPDSVSYLLGKPLNEEEYFQAATLGWMTELLQAFFLVS 124 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--- 146 DD+ MD RRGKP + E ++A N AF + ++ T L+ R Sbjct: 125 DDI--MDTSITRRGKPCWYRH--EGVGMVAIND----AFMLEAAIYTLLRKFFREHASYV 176 Query: 147 -MLSLTHNIGLQGMLGGQMLDI 167 +L L H + Q L GQ+ D+ Sbjct: 177 DLLELFHEVTFQTEL-GQLCDL 197 >gi|324513413|gb|ADY45511.1| Geranylgeranyl pyrophosphate synthase [Ascaris suum] Length = 307 Score = 35.4 bits (80), Expect = 6.1, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK +RS L T +N + +E +H SL+ DD+ D+ +RRG P H Sbjct: 20 GKHVRSRLATAFNLWLKINDNPLELIMCTVEMLHNASLLIDDIE--DSSILRRGIPVAHS 77 Query: 110 QYDEVTAIIAGN 121 Y I GN Sbjct: 78 VYGVARTINTGN 89 >gi|254416180|ref|ZP_05029935.1| polyprenyl synthetase family [Microcoleus chthonoplastes PCC 7420] gi|196177113|gb|EDX72122.1| polyprenyl synthetase family [Microcoleus chthonoplastes PCC 7420] Length = 452 Score = 35.4 bits (80), Expect = 6.3, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 18/165 (10%) Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN-------GLLTYAFEIISSPK 135 H LIHDD+ D RRGK T+H AI G+ GLL ++ K Sbjct: 172 HNAFLIHDDI--EDESESRRGKGTLHQMIGIPRAINVGDATNVLAVGLLLENLSVLGVSK 229 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195 NI ++ ++ Q M + D+ M K C Sbjct: 230 AL---NILHEIEFMARQSVEGQAMELDWVATNPSHLSDQDYFTMCVKKTCWYSFITPCRI 286 Query: 196 GAIMAHASQNEKERLRC------FGENLGIIFQLADDLLDCEEDL 234 G I+ H + + ++ + FG LGI FQ+ DDLL+ + ++ Sbjct: 287 GLIVGHPASSVQDLIEPLAGLTRFGMILGIAFQIQDDLLNLQGEM 331 >gi|312383692|gb|EFR28678.1| hypothetical protein AND_03051 [Anopheles darlingi] Length = 197 Score = 35.4 bits (80), Expect = 6.5, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + ++ A+++ A + E +G NLG+ FQ DDLLD Sbjct: 48 KTASLIANSLKAVAVLSGADEQMAELSFQYGRNLGLAFQFVDDLLD 93 >gi|70995862|ref|XP_752686.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293] gi|42820719|emb|CAF32032.1| geranylgeranyl pyrophosphate synthetase, putative [Aspergillus fumigatus] gi|66850321|gb|EAL90648.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293] gi|159131440|gb|EDP56553.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus A1163] Length = 387 Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 13/181 (7%) Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 GK IR L+T V + + + +H SL+ DD+ DN +RRG P H Sbjct: 90 GKDIRRQLITAFNVWLQVRPESLSIITKVVGMLHTASLLVDDVE--DNSILRRGIPVAHN 147 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168 + I + N + A + + +I Q +L+L G+ + + Sbjct: 148 IFGTAQTINSANYVYFLALQEVQKLNNPTAIDIFVQELLNLHRGQGMDLFWRDTLTCPTE 207 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 ++++D M+ KTG L A + + A +G+IFQ+ DD L Sbjct: 208 EDYLD-----MVGN-KTGGLFRLAIK----LMQAESTTGIDCVSLVNVMGLIFQICDDYL 257 Query: 229 D 229 + Sbjct: 258 N 258 >gi|85001640|ref|XP_955531.1| farnesyl pyrophosphate synthetase [Theileria annulata strain Ankara] gi|65303677|emb|CAI76055.1| farnesyl pyrophosphate synthetase, putative [Theileria annulata] Length = 384 Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 53/232 (22%) Query: 42 AIRYALLGGKKIRSFLV-------------------TECASLFNVNHLTALRVGAAIECI 82 A++Y L GGK +R +V T ++N NHL V +E + Sbjct: 50 AVQYNLQGGKMLRGTMVLSTVKSLCGTNIPENLMTQTLIVGMYNSNHLKQFIVAWCVELL 109 Query: 83 HCYSLIHDDLPSMDNGYIRRGK------PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 L+ DD+ +D RR PT+ + AI L T + I+ + Sbjct: 110 QTSFLVADDI--IDKSTKRRSNTCWYLVPTIGVS----NAINDVMFLYTLIYRILFNT-- 161 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--------ETQVFM-IQKMKTGA 187 +KD+ + ++ + + + +LG Q LDI + D T++F I K KT Sbjct: 162 -MKDSKKFLEIIETFNRVSMTTILG-QHLDIYESNSDVLFHDSKEATKLFAEICKNKTSY 219 Query: 188 LMCF------ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 F SG +++ ++ E + +G +FQ DD LDC D Sbjct: 220 YSFFLPLKLGMMLSGVELSNLFYSKVESISIL---IGTLFQAQDDYLDCYGD 268 >gi|115753941|ref|XP_001195950.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115932639|ref|XP_001187762.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 165 Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%) Query: 50 GKKIRSFLVTECASLFNV-NHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 GK R +V + + N+ N LT ++ E IH SL+HDD+ +D RR Sbjct: 21 GKSFRPMIVLLMSRVCNLHNSLTESIKDSQKKIAMITEMIHTASLMHDDV--IDAADTRR 78 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 GK +++ + + +I+AG+ +L+ + + ++ Sbjct: 79 GKTSINELFGQRKSILAGDFVLSISSQALA 108 >gi|289806033|ref|ZP_06536662.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 137 Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D Sbjct: 15 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGD 69 >gi|254367578|ref|ZP_04983601.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica 257] gi|134253391|gb|EBA52485.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica 257] Length = 203 Score = 35.0 bits (79), Expect = 7.7, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%) Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 Q++ T+ I +L Q+L+ ++ + E + + KT L ACE +++ Q Sbjct: 12 QILADATNKISEGEVL--QLLNARNSELSEEEYIKVIYCKTAKLFEAACELAGLISIDKQ 69 Query: 205 NEKE---RLRCFGENLGIIFQLADDLLDCEED 233 + + R++ +G LG FQ+ADD+LD D Sbjct: 70 DYTKYQGRIKNYGVYLGNAFQIADDVLDYVSD 101 >gi|242820546|ref|XP_002487531.1| serine palmitoyltransferase 1, putative [Talaromyces stipitatus ATCC 10500] gi|218713996|gb|EED13420.1| serine palmitoyltransferase 1, putative [Talaromyces stipitatus ATCC 10500] Length = 639 Score = 35.0 bits (79), Expect = 7.9, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%) Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMD---NGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +NH ++R GA + H+++ ++ I +G+P H + ++ ++ GL Sbjct: 312 LNH-ASIRFGARLSGASIRVFSHNNMADLECKLRDAISQGQPRTHRPWKKI--LVTVEGL 368 Query: 124 LTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 + +++ P +LK+ R L + H+IG G G + D ID +++ ++ Sbjct: 369 YSMEGTMVNLPGIMELKERYRFYLYIDEAHSIGAVGPNGRGVCDYFG--IDPSRIEILMG 426 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218 T + F G + A S EK R C G+ G Sbjct: 427 TFTKS---FGANGGYVAAVKSIIEKLRATCSGQIFG 459 >gi|238878238|gb|EEQ41876.1| serine palmitoyltransferase 2 [Candida albicans WO-1] Length = 569 Score = 35.0 bits (79), Expect = 8.0, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 14/149 (9%) Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDN---GYIRRGKPTVHIQYDEVTAIIAGNGL 123 +NH ++R G + H+D+ ++N I +G+P H ++++ I+A GL Sbjct: 255 LNH-ASIRFGIRLSGASVKVFKHNDMNDLENLIRNQIAQGQPKTHRPWNKI--IVAVEGL 311 Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQ 181 + + + P+ ++KD + L + H+I G LG + I D F +D +V ++ Sbjct: 312 YSMEGNMCNLPEIVRIKDKYKCYLFVDEAHSI---GALGPEGRGICDYFSVDPARVDVLM 368 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERL 210 T + F G I + EK RL Sbjct: 369 GTLTKS---FGATGGYIAGDKTLIEKLRL 394 >gi|52081669|ref|YP_080460.1| transcriptional regulator [Bacillus licheniformis ATCC 14580] gi|52787054|ref|YP_092883.1| ComQ [Bacillus licheniformis ATCC 14580] gi|18266382|gb|AAL67539.1|AF459919_3 ComQ protein [Bacillus licheniformis] gi|52004880|gb|AAU24822.1| transcriptional regulator [Bacillus licheniformis ATCC 14580] gi|52349556|gb|AAU42190.1| ComQ [Bacillus licheniformis ATCC 14580] gi|301752359|gb|ADK89154.1| ComQ [Bacillus licheniformis] Length = 289 Score = 35.0 bits (79), Expect = 8.1, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 20/170 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A +GA IE + I DDL D+ +P + I + A+ A L T + ++I Sbjct: 49 AETLGAGIELLILAFDIFDDLEDEDSP----DEPWMKI--NRSVAMNAATALYTISIKVI 102 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 S K+ + + ++ T LQ M GQ D+ + E + + K K+GAL Sbjct: 103 GSVS---KEPVFFEKLMEYT----LQSM-QGQHDDLSNRPATEDECLDMIKRKSGALTAL 154 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADD----LLDCEEDLPKK 237 C GA++A + + + LGI Q+ +D D + D+ KK Sbjct: 155 PCVLGAMLATGKFD--PTVEKYAYQLGIASQIENDYKALFYDSKSDIAKK 202 >gi|319647582|ref|ZP_08001802.1| ComQ protein [Bacillus sp. BT1B_CT2] gi|317390430|gb|EFV71237.1| ComQ protein [Bacillus sp. BT1B_CT2] Length = 293 Score = 35.0 bits (79), Expect = 8.5, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 20/170 (11%) Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A +GA IE + I DDL D+ +P + I + A+ A L T + ++I Sbjct: 49 AETLGAGIELLILAFDIFDDLEDEDSP----DEPWMKI--NRSVAMNAATALYTISIKVI 102 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 S K+ + + ++ T LQ M GQ D+ + E + + K K+GAL Sbjct: 103 GSVS---KEPVFFEKLMEYT----LQSM-QGQHDDLSNRPATEDECLDMIKRKSGALTAL 154 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADD----LLDCEEDLPKK 237 C GA++A + + + LGI Q+ +D D + D+ KK Sbjct: 155 PCVLGAMLATGKFD--PTVEKYAYQLGIASQIENDYKALFYDSKSDIAKK 202 >gi|66800205|ref|XP_629028.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium discoideum AX4] gi|74850574|sp|Q54BK1|GGPPS_DICDI RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|60462385|gb|EAL60606.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium discoideum AX4] Length = 303 Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK R+ L+ V + I+ +H SL+ DD+ DN +RRGKP H Sbjct: 30 SGKGFRNALIKSFDYWLKVGDEKVQDISKVIQGLHGASLLIDDIE--DNSKLRRGKPVAH 87 Query: 109 IQYDEVTAIIAGN 121 Y I + N Sbjct: 88 SIYGIPQTINSAN 100 >gi|170574826|ref|XP_001892983.1| geranylgeranyl pyrophosphate synthetase [Brugia malayi] gi|158601230|gb|EDP38192.1| geranylgeranyl pyrophosphate synthetase, putative [Brugia malayi] Length = 306 Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust. Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 34/204 (16%) Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 +LL+ +Y L L GK++RS L V+ + +E +H SL+ DD+ D Sbjct: 7 QLLAPYQYILKLPGKQLRSQLAKAFNFWLQVDVEVLDSIMTVVEMLHNASLMIDDIE--D 64 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA---------FEIISSPKTQLKDNIRSQLM 147 + +RRG P H Y I N + A FE + QL + R Q Sbjct: 65 SSLLRRGLPVTHSIYGIARTINTANYVYFAALSRCILLGKFEAVEIFTEQLLELHRGQ-- 122 Query: 148 LSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 G+ L +D + E + + KTG L + + + Sbjct: 123 --------------GKELYWRDIVQCPTEEEYEQMAMQKTGGLFALTVQLMELFGKKQYD 168 Query: 206 EKERLRCFGENLGIIFQLADDLLD 229 K ++ NL I FQ+ DD ++ Sbjct: 169 FKSLIK----NLAIYFQIRDDYIN 188 >gi|330796722|ref|XP_003286414.1| polyprenyl synthetase [Dictyostelium purpureum] gi|325083609|gb|EGC37057.1| polyprenyl synthetase [Dictyostelium purpureum] Length = 298 Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GK R+ L+ V + ++ +H SL+ DD+ DN +RRGKP H Sbjct: 25 SGKGFRNTLIKSFDFWLKVGDERVKDISQVVQGLHVSSLLIDDIE--DNSKLRRGKPVAH 82 Query: 109 IQYDEVTAIIAGN 121 Y I + N Sbjct: 83 SIYGIPQTINSAN 95 >gi|170044368|ref|XP_001849822.1| trans-prenyltransferase [Culex quinquefasciatus] gi|167867554|gb|EDS30937.1| trans-prenyltransferase [Culex quinquefasciatus] Length = 205 Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 KT +L+ + ++ A+++ A + E +G NLG+ FQ DDLLD Sbjct: 56 KTASLIANSLKAVAVLSGADEQMVELSFQYGRNLGLAFQFVDDLLD 101 >gi|296330769|ref|ZP_06873245.1| ComQ [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675758|ref|YP_003867430.1| isoprenyl-trasferase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152083|gb|EFG92956.1| ComQ [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414002|gb|ADM39121.1| isoprenyl-trasferase (ComX modification) [Bacillus subtilis subsp. spizizenii str. W23] Length = 286 Score = 34.7 bits (78), Expect = 9.9, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 16/152 (10%) Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A IE + I+DDL DNG V ++ D A+ A L T + +++ Sbjct: 52 LAAGIELLILSFDIYDDLEDKDNG------NAVWMKIDSSIALNAVTALYTLSIQVMCQA 105 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 + K SQ +L N LQ + GQ DI + E + K K+GAL C Sbjct: 106 SHEPK---FSQEIL----NFALQS-IQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCV 157 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 G ++A + + + LGII Q+ +D Sbjct: 158 MGVMLATGKYH--PIVASYSYELGIIAQIEND 187 Searching..................................................done Results from round 2 >gi|254781111|ref|YP_003065524.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040788|gb|ACT57584.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 237 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 237/237 (100%), Positives = 237/237 (100%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE Sbjct: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG Sbjct: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI Sbjct: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK Sbjct: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 >gi|315122480|ref|YP_004062969.1| geranyltranstransferase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495882|gb|ADR52481.1| geranyltranstransferase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 297 Score = 277 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 167/232 (71%), Positives = 196/232 (84%), Gaps = 4/232 (1%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 MN L KLQENS++I+++L+DLL SH + NDRL SAIRYA+LGGK IRSFLV E Sbjct: 1 MNDDLLLKLQENSQKIESLLNDLL----SHQSSYLNDRLRSAIRYAILGGKNIRSFLVAE 56 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 CASLF +++ T LRVGAAIEC+HCYSLIHDDLPSMDNGYIRRGKPT+H+QYDE TAI+AG Sbjct: 57 CASLFGLSNPTVLRVGAAIECVHCYSLIHDDLPSMDNGYIRRGKPTLHLQYDEATAILAG 116 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 N LLTYAFEII SP+TQLKD+IRS+L LSL N G+QGMLGGQMLDIQ+E +DE Q+ I Sbjct: 117 NSLLTYAFEIICSPETQLKDSIRSELTLSLARNAGIQGMLGGQMLDIQNECLDEKQLLTI 176 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 Q+MKTG+LM FACE+GAI+AH +Q EK RLR +GENLGI+FQL DDLLD EE Sbjct: 177 QEMKTGSLMRFACEAGAIIAHTNQEEKARLRYYGENLGIVFQLVDDLLDFEE 228 >gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa] Length = 370 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 83/241 (34%), Positives = 127/241 (52%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + E + R++ LDD + + ++ A+RY+LL GGK++R L Sbjct: 77 FNFKSYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAA 129 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 130 CELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 189 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178 LL +AFE I+ + + + L +IG +G++ GQ++DI E + + Q+ Sbjct: 190 ALLAFAFEHIAVSTAGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLEQLE 249 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ A GAI+ S + E+LR F +G++FQ+ DD+LD ++L Sbjct: 250 FIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELG 309 Query: 236 K 236 K Sbjct: 310 K 310 >gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var. palaestina] Length = 364 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 83/243 (34%), Positives = 130/243 (53%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M + L E K ++ LD+ +L + +++ A+RY+LL GGK++R L Sbjct: 69 MTFDFKAYLLEKGKSVNQALDNAIL-------IREPEKIHEAMRYSLLAGGKRVRPILCI 121 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + L N A+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++A Sbjct: 122 AASELVGGNESMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLA 181 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQ 176 G+ LL +AFE +++ + + + + L +IG +G++ GQ++DI + Sbjct: 182 GDALLAFAFEYVANATVGVSPSRVVRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDH 241 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I KT AL+ + GAI+ + + ERLR F +G++FQ+ DD+LD E+ Sbjct: 242 LEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEE 301 Query: 234 LPK 236 L K Sbjct: 302 LGK 304 >gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula] Length = 372 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 82/241 (34%), Positives = 127/241 (52%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + E + R++ LDD + + ++ A+RY+LL GGK++R L Sbjct: 79 FNFKSYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAA 131 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 132 CELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 191 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178 LL +AFE I+ + + + L +IG +G++ GQ++DI E + + ++ Sbjct: 192 ALLAFAFEHIAVSTVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLE 251 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ A GAI+ S + E+LR F +G++FQ+ DD+LD ++L Sbjct: 252 FIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQELG 311 Query: 236 K 236 K Sbjct: 312 K 312 >gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa] Length = 371 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 128/242 (52%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 S + + + ++ LDD + ++ ++RY+LL GGK+IR L Sbjct: 77 TFDFKSYMLQKADSVNKALDD-------SIPLTEPLKIQESMRYSLLAGGKRIRPMLCIA 129 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + TA+ A+E +H SL+HDDLP MDN +RRGKPT H + E A++AG Sbjct: 130 ACELVGGDESTAMPAACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHKVFTEDVAVLAG 189 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177 + +L ++FE ++S + +++ L +G +G++ GQ++DI E +DE + Sbjct: 190 DAMLAFSFEHVASLTKGVCSERIVRVIYELAKCVGCEGLVAGQVVDICSEGMDEVGLEHL 249 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT AL+ + GAI+ S E E+LR F +G++FQ+ DD+LD ++L Sbjct: 250 EFIHLNKTAALLEGSVVLGAILGGGSDEEVEKLRNFARCIGLLFQVVDDILDVTKSSKEL 309 Query: 235 PK 236 K Sbjct: 310 GK 311 >gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies] Length = 385 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + I+ LD + +H +++ A+RY+LL GGK++R L Sbjct: 92 FEFKKYMFSKANAINEALDKC-------VSLRHPEKIHEAMRYSLLAGGKRVRPILCIAS 144 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + + + A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 145 CELVGGSEESVMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 204 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVF 178 LL +AFE I+ ++ +++ L IG +G++ GQ++D+ + + Sbjct: 205 ALLAFAFEHIACSTKGVEAEKVLRVIWELGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLE 264 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ + GAI+ S E ERLR F +G++FQ+ DD+LD ++L Sbjct: 265 YIHVHKTAALLEGSVVIGAIIGGGSDEEIERLRRFARCIGLMFQVVDDILDVTKSSQELG 324 Query: 236 K 236 K Sbjct: 325 K 325 >gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata] Length = 365 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 127/242 (52%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + E ++ LD S + + +++ A+RY+LL GGK++R L Sbjct: 71 TFNFKAYMIEKGHSVNQALD-------SAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLA 123 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG Sbjct: 124 ACELVGGHESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAG 183 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177 + LL +AFE I+ + + + L +IG +G++ GQ++DI E + + Q+ Sbjct: 184 DALLAFAFEHIAVSTVGVSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQL 243 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT AL+ + GAI+ S E E+LR F +G++FQ+ DD+LD ++L Sbjct: 244 EFIHVHKTAALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQEL 303 Query: 235 PK 236 K Sbjct: 304 GK 305 >gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus] Length = 372 Score = 267 bits (684), Expect = 8e-70, Method: Composition-based stats. Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 14/240 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + + E + ++ L+ +L + ++ ++RY+LL GGK++R L Sbjct: 80 DFKTYMLEKASSVNKALEQAVL-------LKEPLKIHESMRYSLLAGGKRVRPMLCIAAC 132 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+ Sbjct: 133 ELVGGLESTAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDA 192 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFM 179 LL ++FE ++ + + +++ L IG +G++ GQ++DI E + E + Sbjct: 193 LLAFSFEHVAKSTKGVSSDRIVRVIGELAKCIGSEGLVAGQVVDISSEGMTEVGLEHLEF 252 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I KT AL+ + GAI+ A + E+LR F +G++FQ+ DD+LD ++L K Sbjct: 253 IHVHKTAALLEASVVLGAIVGGADDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQELGK 312 >gi|225430848|ref|XP_002273789.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 368 Score = 267 bits (684), Expect = 8e-70, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + + + ++ LDD + + ++ ++RY+LL GGK++R L Sbjct: 75 FNFNAYILDKANSVNKALDD-------AVPIREPVKVHESMRYSLLAGGKRVRPVLCIAA 127 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SL+HDDLP MDN +RRGKPT H + E AI+AG+ Sbjct: 128 CELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGD 187 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178 LL +AFE +++ + + + L +IG +G++ GQ++DI E + + + Sbjct: 188 ALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLE 247 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ A GAI+ S E E+LR F +G++FQ+ DD+LD ++L Sbjct: 248 YIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELG 307 Query: 236 K 236 K Sbjct: 308 K 308 >gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus] Length = 368 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 79/243 (32%), Positives = 128/243 (52%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 + S + + + I+ L+ + + + ++ ++RY+LL GGK++R L Sbjct: 73 LGFDFKSYMVQKASAINQALE-------AAVSLREPLKIHESMRYSLLAGGKRVRPALCL 125 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L + A+ A+E IH SLIHDDLP MDN +RRGKPT HI + E A++A Sbjct: 126 AACELVGGDESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLA 185 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQ 176 G+ LL +AFE I+ + + + L IG +G++ GQ++DI E + E + Sbjct: 186 GDALLAFAFEHIAVSTLNVSPVRIVRGVGELAKAIGAEGLVAGQVVDICSEGLSEVDLEK 245 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I KT L+ A GAIM + E E+LR + ++G++FQ+ DD+LD ++ Sbjct: 246 LEFIHIHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQE 305 Query: 234 LPK 236 L K Sbjct: 306 LGK 308 >gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota subsp. sativus] Length = 367 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 13/240 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++ + K+I+ LD+ + Q + A+RY+LL GGK++R L Sbjct: 74 FHFEGYMKTSGKKINKALDE-------AVPVQKPAIIHEAMRYSLLAGGKRVRPVLCIAS 126 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ + A+E IH SLIHDDLP MDN +RRGKPT H Y E TAI+AG+ Sbjct: 127 CELVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGD 186 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL+ AFE ++ + + + L +G QG++ GQ++DI ++ +D + Sbjct: 187 ALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEY 246 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I KT L+ + GAI+ + E ERLR + +G++FQ+ DD+LD +L K Sbjct: 247 IHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKSSAELGK 306 >gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota] Length = 367 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 13/240 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++ + K+I+ LD+ + Q + A+RY+LL GGK++R L Sbjct: 74 FHFEGYMKTSGKKINKALDE-------AVPVQKPAIIHEAMRYSLLAGGKRVRPVLCIAS 126 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ + A+E IH SLIHDDLP MDN +RRGKPT H Y E TAI+AG+ Sbjct: 127 CELVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGD 186 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL+ AFE ++ + + + L +G QG++ GQ++DI ++ +D + Sbjct: 187 ALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEY 246 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I KT L+ + GAI+ + E ERLR + +G++FQ+ DD+LD +L K Sbjct: 247 IHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKSSAELGK 306 >gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata] Length = 366 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + E + ++ LD+ ++ + + A+RY+LL GGK++R L Sbjct: 72 QFNFKTYVAEKAISVNKALDEAVI-------VKDPPVIYEAMRYSLLAGGKRVRPMLCLA 124 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A+ A+E IH SLIHDDLP MDN IRRGKPT H Y E A++AG Sbjct: 125 ACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDIRRGKPTNHKVYGEDVAVLAG 184 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177 + LL +AFE I++ + + + L +IG +G++ GQ+ DI + + + Sbjct: 185 DSLLAFAFEFIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTL 244 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT AL+ + GAI+ + E E+LR F +G++FQ+ DD+LD E+L Sbjct: 245 EFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEEL 304 Query: 235 PK 236 K Sbjct: 305 GK 306 >gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum] Length = 365 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 13/240 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++ + +++ LDD + Q ++ A+RY+LL GGK++R L Sbjct: 73 FDFEEYMKMKAIKVNKALDDAI-------PMQEPIKIHEAMRYSLLAGGKRVRPILCMAS 125 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + A+ ++E IH SLIHDDLP MDN +RRGKPT H + E TA++ G+ Sbjct: 126 CEVVGGDESLAIPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKAFGEDTAVLTGD 185 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL+ AFE ++S + Q + L +G +G++ GQ++DI E + T++ Sbjct: 186 ALLSLAFEHVASKTKDVTPQRVVQAVGELGSAVGSKGLVAGQIVDIASEGKQVSLTELEY 245 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I KTG L+ A GAI+ ++ E ER+R + LG++FQ+ DD+LD E+L K Sbjct: 246 IHNHKTGKLLEAAVVCGAIIGGGNEIEVERMRNYARCLGLLFQVVDDILDVTKSSEELGK 305 >gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 372 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 78/238 (32%), Positives = 127/238 (53%), Gaps = 13/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + +K ++ LD+ + Q+ ++ A+RY+LL GGK++R L Sbjct: 82 FEEYMATKAKHVNKALDEAI-------PLQNPVKIHDAMRYSLLAGGKRVRPVLCIAACE 134 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E TAI+AG+ L Sbjct: 135 LVGGDEATAMPAACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDAL 194 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 L+++FE ++ + + + + L +G +G++ GQ++DI E + + + I Sbjct: 195 LSFSFEHVARSTKNVSPDRVVRAIAELGSAVGSEGLVAGQIVDIDSEGKDVSVSDLEYIH 254 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 KT L+ + GAI+ A ER+R + +G++FQ+ DD+LD E+L K Sbjct: 255 IHKTAKLLEASVVCGAILGGADDESVERVRKYARCIGLLFQVVDDILDVTKSSEELGK 312 >gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa] gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa] Length = 365 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 126/240 (52%), Gaps = 13/240 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + +++ LD+ + QH ++ A+RY+LL GGK++R L Sbjct: 73 FEFKEYMINKANQVNKALDE-------AVPLQHPQKINEAMRYSLLAGGKRVRPILCIAS 125 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TA++AG+ Sbjct: 126 CELVGGDEGLAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEDTAVLAGD 185 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL+ AFE ++ + + Q + L +G +G++ GQ++DI E + + + Sbjct: 186 ALLSLAFEHVARNTKNVSSDRVVQAIAELGSTVGSKGLVAGQIVDIDSEGKEVSLSTLEY 245 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I KT L+ A GAIM A ERLR + ++G++FQ+ DD+LD E+L K Sbjct: 246 IHVHKTAKLLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDVTKSSEELGK 305 >gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus] Length = 364 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 73/233 (31%), Positives = 120/233 (51%), Gaps = 11/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61 L S + + + ++ L+ + + + ++ A+RY+ L GGK++R L Sbjct: 71 FDLKSYMIQKANSVNQALE-------TAVSLREPLKIHEAMRYSVLAGGKRVRPVLCIAA 123 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDD P MDN +RRGKPT H + E A++AG+ Sbjct: 124 CELVGGEESMAMPAACAVEMIHTMSLIHDDPPCMDNDDLRRGKPTNHKVFGEDIAVLAGD 183 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178 LL ++FE ++ + + + L +IG +G++ GQ++DI E + + + Sbjct: 184 ALLAFSFEHMTGSTVGVSPARIVRAVGELAKSIGSEGLVAGQVVDICSEGLTDVGLEHLE 243 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT AL+ + GAI+ S E E+LR F +G++FQ+ DD+LD Sbjct: 244 FIHVHKTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDILDVT 296 >gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424] gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424] Length = 307 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 88/242 (36%), Positives = 133/242 (54%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L S L+ +D L+ S + +++ A+RY+LL GGK++R L Sbjct: 14 SFDLTSYLKHQKDLVDQALE-------SSLPITKPEKIYEAMRYSLLAGGKRLRPILCLA 66 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG Sbjct: 67 TCDLMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 126 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 +GLL+YAFE +++ + +++ L +G G++GGQ+LD++ E I + Sbjct: 127 DGLLSYAFEYVATQTRNVPPEQILEVIARLGRTVGAAGLVGGQVLDLESEGKSDITPETL 186 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KTGAL+ + SGAI+A A++ E E+L + +N+G+ FQ+ DD+LD E+L Sbjct: 187 TFIHTHKTGALLETSVVSGAILAGATREEVEKLSRYAQNIGLAFQIVDDILDITATQEEL 246 Query: 235 PK 236 K Sbjct: 247 GK 248 >gi|75250205|sp|Q94ID7|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; Flags: Precursor gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis] Length = 370 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + S + + I+ L+ + + Q ++ ++RY+LL GGK++R L Sbjct: 76 SFDFKSYMLQKGNSINQALE-------AAIPLQEPAKIHESMRYSLLAGGKRVRPALCLA 128 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L N A+ A+E IH SLIHDDLP MDN +RRGKPT HI + E A++AG Sbjct: 129 ACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAG 188 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + LL +AFE I+ + + + L IG +G++ GQ++DI E +D ++ Sbjct: 189 DALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKL 248 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT L+ A GAI+ + E E+LR + ++G++FQ+ DD+LD ++L Sbjct: 249 EFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQEL 308 Query: 235 PK 236 K Sbjct: 309 GK 310 >gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] Length = 294 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 84/237 (35%), Positives = 128/237 (54%), Gaps = 11/237 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L + L+E ID++L L + + +L A++Y+L GGK++R L Sbjct: 2 DLKAYLKERKALIDSVLLTYLPP-----EPEFGKKLYEAVKYSLTVGGKRLRPILCLAGC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + N AL AIE IH YSLIHDDLP+MDN +RRG PT +++ E TAI+AG+ Sbjct: 57 EIVGGNRNDALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWVKFGEATAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179 LL AFE+++ + N + +++ + G+ GM+ GQ D+ E + ++ Sbjct: 117 LLNRAFEVLADWEFDC--NRKVKVISEIARASGMLGMVLGQQCDLDAEGRGDVPLEELLF 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I K KTG L+ + SG I S E + LR +G++LG+ FQ+ DD+LD D K Sbjct: 175 IHKHKTGRLITASVVSGGITGGGSPEEIDALRRYGDSLGLAFQIIDDVLDVVGDQEK 231 >gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum] Length = 366 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 76/234 (32%), Positives = 121/234 (51%), Gaps = 11/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + E + ++ LD+ ++ + + A+RY+LL GGK++R L Sbjct: 72 QFNFKTYVAEKAISVNKALDEAVI-------VKDPPVIHEAMRYSLLAGGKRVRPMLCLA 124 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG Sbjct: 125 ACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAG 184 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177 + LL +AFE I++ + + + L +IG +G++ GQ+ DI + + + Sbjct: 185 DSLLAFAFEYIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTL 244 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT AL+ + GAI+ + E E+LR F +G++FQ+ DD+LD Sbjct: 245 EFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRIFARCIGLLFQVVDDILDVT 298 >gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328] gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328] Length = 316 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 83/241 (34%), Positives = 131/241 (54%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L + L + + ++ LD + + + +++ ++RY+L+ GGK++R L Sbjct: 24 FDLSTYLSQKKELVEAALD-------AAIAVTYPEKIYESMRYSLMAGGKRLRPILCLAT 76 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+ Sbjct: 77 CELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGD 136 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 GLL+YAFE +++ + Q++ L +G G++GGQ++D+ E I E + Sbjct: 137 GLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDLASEGLSDISEETLT 196 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KTGAL+ GAI+A A++ + ERL + +N+G+ FQ+ DD+LD +L Sbjct: 197 FIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITVPSSELG 256 Query: 236 K 236 K Sbjct: 257 K 257 >gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan] Length = 373 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 79/232 (34%), Positives = 124/232 (53%), Gaps = 11/232 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + + +K ++ L+ +L + R+ ++RY+LL GGK+IR L Sbjct: 81 DFTAYVLGKAKSVNKALEGAVL-------VKEPLRIHESMRYSLLAGGKRIRPMLCIAAC 133 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + TA+ A+E IH SL+HDDLP MDN +RRGKPT H Y E A++AG+ Sbjct: 134 ELVGGDEETAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDA 193 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFM 179 LL +AFE I++ +++ L +IG +G++ GQ++DI E I + Sbjct: 194 LLAFAFEHIATATKGASSEKIVRVVGELAKSIGAEGLVAGQVVDICSEGISNVGLEHLEF 253 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT AL+ + GAI+ ++ E +LR F N+G++FQ+ DD+LD Sbjct: 254 IHLHKTAALLEGSVVLGAILGGGTEEEIAKLRKFARNIGLLFQVVDDILDVT 305 >gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas] Length = 370 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 78/241 (32%), Positives = 123/241 (51%), Gaps = 13/241 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N + + ++ LD + H ++ +A+RY+LL GGK++R L Sbjct: 77 NFPFEEYMVLKANNVNEALD-------KAVPLNHPLKIHAAMRYSLLAGGKRVRPILCIA 129 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TAI+AG Sbjct: 130 ACELVGGDEAAAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAG 189 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + +L+ AFE I+ + +++ L +G +G++ GQ++D+ E ++ + Sbjct: 190 DAMLSLAFEHIARATKNVSPERVVRVITELGSAVGSEGLVAGQIVDVCSEGKEVNVKDLE 249 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT L+ A GAI A ER+R + +G++FQ+ DD+LD E+L Sbjct: 250 YIHIHKTAKLLEAAVVCGAIAGGADDESIERVRKYARCIGLLFQVIDDILDVTKSSEELG 309 Query: 236 K 236 K Sbjct: 310 K 310 >gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1] gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1] Length = 294 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 85/239 (35%), Positives = 132/239 (55%), Gaps = 10/239 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN +L++ S+++D LD + + + + + A+RY++ GGK++R LV Sbjct: 1 MN--FKEELKQWSQKVDEALDRYIPSSDA-----YPSVIHEAMRYSIFAGGKRLRPILVL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 N + V A+E IH YSL+HDDLP+MDN RRG+PT H Y E AI+ Sbjct: 54 AATQAVGGNTEKVMPVACAMELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILV 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177 G+ L T AFE+I+ + + +Q+ L + G G++GGQ++DI ++ ID + Sbjct: 114 GDALQTLAFELIAQTTESFEADRVNQVTLEIAKAAGSSGLIGGQVVDILSENRDIDGDTL 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTGAL + +GAI+ A+ N+ L + E +G+ FQ+ DDLLD E D K Sbjct: 174 EYIHRHKTGALFRASIRAGAILGGATVNQLAALTLYAEQMGLAFQIKDDLLDIEGDEAK 232 >gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801] gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802] gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801] gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802] Length = 309 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 90/242 (37%), Positives = 131/242 (54%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N L S L++ + ++ LD L T + + A+RY+LL GGK++R L Sbjct: 16 NFDLASYLKDKQQLVEAALDRSLAIT-------RPETIYEAMRYSLLAGGKRLRPILCLT 68 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L AL A+E IH SLIHDDLP+MDN RRGK T H +Y E AI+AG Sbjct: 69 TCELLGGTLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKYGEDIAILAG 128 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 +GLL YAFE ++ + + ++ L +G G++GGQ+LD++ E I + Sbjct: 129 DGLLAYAFEYAATQTRNVDPHNLINVLGRLGRTVGPAGLVGGQVLDLESEGKPDITVDTL 188 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KTGAL+ + SGAI+A S + +RL + +N+G+ FQ+ DD+LD E+L Sbjct: 189 KFIHTHKTGALLETSVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDDILDITSTQEEL 248 Query: 235 PK 236 K Sbjct: 249 GK 250 >gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var. palaestina] Length = 310 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 82/243 (33%), Positives = 130/243 (53%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ + L E K ++ LD+ +L + +++ A+RY+LL GGK++R L Sbjct: 15 MDFDFKAYLLEKGKSVNQALDNAVL-------IREPEKIHEAMRYSLLAGGKRVRPILCI 67 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N A+ A+E IH SL+HDDLP MDN +RRGKPT H Y E A++A Sbjct: 68 AACELVGGNESMAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLA 127 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQ 176 G+ LL +AFE +++ + + + + L +IG +G++ GQ++DI + Sbjct: 128 GDALLAFAFEYVANATVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDH 187 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I KT AL+ + GAI+ + + ERLR F +G++FQ+ DD+LD E+ Sbjct: 188 LEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEE 247 Query: 234 LPK 236 L K Sbjct: 248 LGK 250 >gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 309 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 130/241 (53%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L + L+E +++ LD + + +++ A+RY+LL GGK++R L Sbjct: 17 FDLSTYLKERKAQVEAALDR-------SLPLGYPEKIYEAMRYSLLAGGKRLRPILCLAT 69 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E +H SLIHDDLP+MDN RRGK T H Y E AI+AG+ Sbjct: 70 CELMGGTMEMAMPTACALEMLHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDMAILAGD 129 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 GLL YAFE +++ + Q++ L +G G++GGQ++D++ E I E + Sbjct: 130 GLLAYAFEYVATQTQGVPAERVLQVIARLGRTVGAAGLVGGQVVDLESEGKSDIQEETLH 189 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KTGAL+ G I+A A+ + ERL + +N+G+ FQ+ DD+LD E+L Sbjct: 190 YIHTHKTGALLETCVVCGGILAGATDADIERLSRYAQNIGLAFQIIDDILDITATQEELG 249 Query: 236 K 236 K Sbjct: 250 K 250 >gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa] gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa] Length = 365 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 128/242 (52%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 S + + + ++ LD + + + ++ ++RY+LL GGK++R L Sbjct: 71 TFDFKSYMLQKANSVNKALD-------AAVSLKEPAKIHESMRYSLLAGGKRVRPVLCLA 123 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + AL A+E IH SL+HDDLP MDN +RRGKPT HI + E A++AG Sbjct: 124 ACDLVGGSESMALPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAG 183 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177 + LL++AFE I+ + + + L IG +G++ GQ++DI E + E Q+ Sbjct: 184 DALLSFAFEHIAVSTIHVSPLRIVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVGLEQL 243 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT L+ A GAI+ + E E+LR + ++G++FQ+ DD+LD ++L Sbjct: 244 EFIHVHKTAKLLEGAVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILDVTKSSQEL 303 Query: 235 PK 236 K Sbjct: 304 GK 305 >gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum] Length = 365 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 73/232 (31%), Positives = 123/232 (53%), Gaps = 10/232 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + +++ LD+ + Q ++ A+RY+LL GGK++R L Sbjct: 73 FEFQEYMVTKAIKVNKALDEAI-------PMQEPIKVHEAMRYSLLAGGKRVRPILCMAS 125 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + A+ A+E IH SL+HDDLP MDN +RRGKPT H + E TA++AG+ Sbjct: 126 CEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKIFGENTAVLAGD 185 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL+ AFE +++ + Q + L +G +G++ GQ++D+ E + T++ Sbjct: 186 ALLSLAFEHVATKTQNVPPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEY 245 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT L+ A GAIM ++ + ER+R + +G++FQ+ DD+LD Sbjct: 246 IHHHKTSKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVT 297 >gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii] Length = 365 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 73/232 (31%), Positives = 124/232 (53%), Gaps = 10/232 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + +++ LD+ + Q ++ A+RY+LL GGK++R L Sbjct: 73 FEFQEYMVTKAIKVNKALDEAI-------PMQEPIKVHEAMRYSLLAGGKRVRPILCMAS 125 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + A+ A+E IH SL+HDDLP MDN +RRGKPT H + E TA++AG+ Sbjct: 126 CEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENTAVLAGD 185 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL+ AFE +++ + Q + L +G +G++ GQ++D+ E + T++ Sbjct: 186 ALLSLAFEHVATKTQNVAPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEY 245 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I + KT L+ A GAIM ++ + ER+R + +G++FQ+ DD+LD Sbjct: 246 IHQHKTAKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVT 297 >gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana] Length = 373 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + + + ++ LD + + + ++ A+RY+LL GGK++R L Sbjct: 79 TFNFKTYMLQKANSVNQALD-------AAVSLKDPRKIHEAMRYSLLAGGKRVRPMLCIA 131 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L A+ ++E IH SLIHDDLP MDN +RRGKPT H + E A++AG Sbjct: 132 ACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 191 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177 + LL ++FE I+ + + + L +IG +G++ GQ++DI E + + + Sbjct: 192 DALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSDVGLEHL 251 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT AL+ A GAI+ S E E+LR F +G++FQ+ DD+LD ++L Sbjct: 252 EFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSQEL 311 Query: 235 PK 236 K Sbjct: 312 GK 313 >gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa] gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa] Length = 366 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 126/242 (52%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 S + + + ++ LD + + + ++ ++RY+LL GGK++R L Sbjct: 72 TFDFKSYMIQKANSVNKALD-------TAVTLKEPAKIHESMRYSLLAGGKRVRPVLCLA 124 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A+ A+E IH SLIHDDLP MDN +RRGK T HI + E A++AG Sbjct: 125 ACELVGGSESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKSTNHIVFGEDVAVLAG 184 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177 + LL +AFE I+ + + + L IG +G++ GQ++DI E + E Q+ Sbjct: 185 DALLAFAFEHIAVSTLNVSPLRIVRAVGELAKVIGAEGLVAGQVVDICSEGLSEVGLEQL 244 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT L+ A GAI+ + E E+LR + ++G++FQ+ DD+LD ++L Sbjct: 245 EFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRRYARSIGLLFQVVDDILDVTKSSQEL 304 Query: 235 PK 236 K Sbjct: 305 GK 306 >gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus] Length = 356 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + + LD+ ++ ++ + A+RY+LL GGK++R L Sbjct: 61 TFNFNAYMLGKGNSVHKALDESIM-------IKNPPTIHEAMRYSLLAGGKRVRPILCIA 113 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L TA+ A+E IH SLIHDDLP MDN RRGKPT H Y E A++AG Sbjct: 114 ACELVGGEEATAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVYGEDVAVLAG 173 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQV 177 + LL +AFE +SS + L +IG +G++ GQ++DI + I Q+ Sbjct: 174 DSLLAFAFEYVSSRTEGASPARVLAAIGELAKSIGTEGLVAGQVVDIASTGGQDIGLDQL 233 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT AL+ + GAI+ S + E+LR F +G++FQ+ DD+LD E+L Sbjct: 234 EFIHIHKTAALLEASVVLGAILGGGSDAQVEKLRTFARCIGLLFQVVDDILDVTKSSEEL 293 Query: 235 PK 236 K Sbjct: 294 GK 295 >gi|121145|sp|P80042|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; Flags: Precursor gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum] Length = 369 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 81/241 (33%), Positives = 125/241 (51%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + E + ++ LD+ ++ H+ + A+RY+LL GGK++R L Sbjct: 76 FNFKIYVTEKAISVNKALDEAIIVKEPHV-------IHEAMRYSLLAGGKRVRPMLCLAA 128 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L N A+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+ Sbjct: 129 CELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGD 188 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVF 178 LL +AFE I + + + + L +IG +G++ GQ+ DI+ + + + Sbjct: 189 SLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLE 248 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ + GAI+ + E E+LR F +G++FQ+ DD+LD E+L Sbjct: 249 FIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELG 308 Query: 236 K 236 K Sbjct: 309 K 309 >gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera] Length = 308 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + + + ++ LDD + + ++ ++RY+LL GGK++R L Sbjct: 15 FNFNAYILDKANSVNKALDD-------AVPIREPVKVHESMRYSLLAGGKRVRPVLCIAA 67 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SL+HDDLP MDN +RRGKPT H + E AI+AG+ Sbjct: 68 CELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGD 127 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178 LL +AFE +++ + + + L +IG +G++ GQ++DI E + + + Sbjct: 128 ALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLE 187 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ A GAI+ S E E+LR F +G++FQ+ DD+LD ++L Sbjct: 188 YIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELG 247 Query: 236 K 236 K Sbjct: 248 K 248 >gi|15234534|ref|NP_195399.1| GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1); farnesyltranstransferase [Arabidopsis thaliana] gi|13432144|sp|P34802|GGPP1_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 1, chloroplastic; Short=GGPP synthase 1; Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1; AltName: Full=Dimethylallyltranstransferase 1; AltName: Full=Farnesyl diphosphate synthase 1; AltName: Full=Farnesyltranstransferase 1; AltName: Full=Geranyltranstransferase 1; Flags: Precursor gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana] Length = 371 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 81/238 (34%), Positives = 126/238 (52%), Gaps = 15/238 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + S + ++ ++ LD S + + ++ A+RY+LL GGK++R L Sbjct: 73 SFDFMSYIITKAELVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIA 125 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG Sbjct: 126 ACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 185 Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173 + LL++AFE ++S + + + + L IG +G++ GQ++DI E +D Sbjct: 186 DALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 245 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + I KT AL+ + GAI+ S +E ERLR F +G++FQ+ DD+LD Sbjct: 246 LEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVT 303 >gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 297 Score = 260 bits (666), Expect = 9e-68, Method: Composition-based stats. Identities = 79/234 (33%), Positives = 123/234 (52%), Gaps = 10/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L + L + ++++ L L+ + +R+ A+RY+LL GGK++R L Sbjct: 5 TFNLKAYLSQRQQQVEEALSAALV-------PAYPERIYEAMRYSLLAGGKRLRPILCLA 57 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L AL A+E IH SLIHDDLP+MDN RRGKPT H + E AI+AG Sbjct: 58 ACELAGGTVEQALPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAG 117 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + LL +AFE I+S + + Q++ + H + G++GGQ++D++ E I + Sbjct: 118 DALLAFAFEHIASQTQGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLE 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ + SG I+A + L + ++G+ FQ+ DD+LD Sbjct: 178 YIHSHKTGALLEVSVVSGGILAGGDEELLAHLSRYARDIGLAFQIVDDILDITA 231 >gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp. lyrata] gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp. lyrata] Length = 379 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 81/238 (34%), Positives = 126/238 (52%), Gaps = 15/238 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + S + ++ ++ LD S + + ++ A+RY+LL GGK++R L Sbjct: 81 SFDFMSYIITKAESVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIA 133 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG Sbjct: 134 ACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 193 Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173 + LL++AFE ++S + + + + L IG +G++ GQ++DI E +D Sbjct: 194 DALLSFAFEHLASATSSDVVSPVRVVRAIGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 253 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + I KT AL+ + GAI+ S +E ERLR F +G++FQ+ DD+LD Sbjct: 254 LEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVT 311 >gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus] Length = 369 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 123/242 (50%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 S + + + ++ LD +L + + A+RY+LL GGK++R L Sbjct: 75 TFNFKSYMVQKANSVNQALDAAVL-------LREPQMIHEAMRYSLLAGGKRVRPVLCLS 127 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG Sbjct: 128 ACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 187 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + LL YAFE ++ + + + L +IG +G++ GQ++DI E + Q+ Sbjct: 188 DALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQL 247 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT AL+ + GAI+ + + E LR F +G++FQ DD+LD ++L Sbjct: 248 EFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILDVTKSSQEL 307 Query: 235 PK 236 K Sbjct: 308 GK 309 >gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822] gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822] Length = 307 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 87/241 (36%), Positives = 132/241 (54%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L + L++ +D L+ + +++ A+RY+LL GGK++R L Sbjct: 15 FDLKAYLKQQKDLVDQALE-------GSLPITKPEKIYEAMRYSLLAGGKRLRPILCLAT 67 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+ Sbjct: 68 CELMGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGD 127 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 GLL+YAFE +++ + N Q++ L +G G++GGQ+LD++ E I + Sbjct: 128 GLLSYAFEFVATQTRNVPPNQVLQVIARLGRTVGAAGLVGGQVLDLESEGKLDITAETLT 187 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KTGAL+ + SGAI+A A+ ++ RL + +N+G+ FQ+ DD+LD E+L Sbjct: 188 FIHTHKTGALLETSVLSGAILAGATSEDQRRLSRYAQNIGLAFQIIDDILDITSTQEELG 247 Query: 236 K 236 K Sbjct: 248 K 248 >gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis] Length = 351 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 76/234 (32%), Positives = 123/234 (52%), Gaps = 11/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + E + ++ L+ S + + ++ ++RY+LL GGK++R L Sbjct: 57 TFDFKKYMLEKASSVNKALE-------SAVSLKEPLKIHESMRYSLLAGGKRVRPMLCLA 109 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + TA+ +IE IH SL+HDDLP MDN ++RRG PT HI + E A++AG Sbjct: 110 ACELVGGHPSTAMPAACSIEMIHTMSLMHDDLPCMDNDHLRRGHPTNHIVFGEDVAVLAG 169 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177 + LL Y+FE +++ + +++ L I +G+L GQ++DI E + E + Sbjct: 170 DALLAYSFEYLATATEGVLPERIVRVIAELAKCIRSEGLLAGQVVDICSEGVSEIGLEHL 229 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT AL+ + GAI+ + E ERLR F +G++FQ+ DD+LD Sbjct: 230 EYIHLHKTAALLEGSVVLGAILGGGNDEEVERLRKFARCIGLLFQVVDDILDVT 283 >gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota subsp. sativus] Length = 365 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 73/234 (31%), Positives = 127/234 (54%), Gaps = 11/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 S + E + ++ LD + + Q ++ ++RY+LL GGK++R L Sbjct: 71 TFDFKSYMLEKAISVNKALD-------ASVSLQEPVKIHESMRYSLLAGGKRVRPILSIA 123 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 LF + A+ A+E IH SL+HDDLP MDN +RRGKPT H Y E A++AG Sbjct: 124 ACELFGGHEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAG 183 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + +L AF ++++ + + + ++++ L IG +G++ GQ++D+ E + + Sbjct: 184 DAMLALAFHLVATETSGVSSSQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLKDL 243 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I + KT AL+ + GAI+ A+ E E++R + +G++FQ+ DD+LD Sbjct: 244 EFIHRSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVT 297 >gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta] Length = 361 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 13/240 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + E + ++ LD + + ++ ++RY+LL GGK++R L Sbjct: 69 FDFKSYMLEKANLVNQALD-------LAVPLKDPIKIHESMRYSLLAGGKRVRPVLCIAA 121 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + LTA+ A+E IH SL+HDDLP MDN RRGKPT H+ Y E A++ G+ Sbjct: 122 CELVGGDGLTAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHMVYGEEIAVLGGD 181 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179 +L++AFE +++ + + + + L IG +G++ GQ++DI E D + Sbjct: 182 AMLSFAFEHMATATKGVSSDRILRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEF 241 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I KT AL+ + GAI+ S E E+LR F ++G++FQ+ DD+LD E+L K Sbjct: 242 IHLHKTAALLEGSVVLGAILGGGSDGEIEKLRKFARSIGLLFQVVDDILDVTKSSEELGK 301 >gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab] gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab] Length = 297 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 81/234 (34%), Positives = 126/234 (53%), Gaps = 10/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L + L + ++++ L L+ + +R+ A+RY+LL GGK++R L Sbjct: 5 TFNLDTYLSQRQQQVEEALSAALV-------PAYPERIYEAMRYSLLAGGKRLRPILCLA 57 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A+ A+E IH SLIHDDLP+MDN RRGKPT H + E AI+AG Sbjct: 58 ACELAGGSVEQAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAG 117 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + LL YAFE I+S + + Q++ + H + G++GGQ++D++ E I + Sbjct: 118 DALLAYAFEHIASQTRGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLE 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ + SG I+A A + RL + ++G+ FQ+ DD+LD Sbjct: 178 YIHSHKTGALLEASVVSGGILAGADEELLARLSHYARDIGLAFQIVDDILDVTA 231 >gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis NIES-39] Length = 316 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 80/234 (34%), Positives = 128/234 (54%), Gaps = 11/234 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L + L + + ++ LD + + + +++ ++RY+L+ GGK++R L Sbjct: 24 FDLSTYLSQKKELVEAALD-------AAITVTYPEKIYESMRYSLMAGGKRLRPTLCLAT 76 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDDLP+MDN RRGK T H Y + AI+AG+ Sbjct: 77 CELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGD 136 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVF 178 GLL+YAFE +++ + Q++ L +G G++GGQ++DI E + E + Sbjct: 137 GLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLT 196 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ GAI+A A++ + ERL + +N+G+ FQ+ DD+LD Sbjct: 197 FIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITA 250 >gi|225458370|ref|XP_002283364.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 371 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 125/241 (51%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + + + LD+ + + ++ A+RY+LL GGK++R L Sbjct: 78 FSFKDYMIQKASSVHKALDEAVY-------VKSPIKIHEAMRYSLLAGGKRVRPALCLAA 130 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 131 CELVGGDESNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 190 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 LL +AFE +++ + + + + L +IG +G++ GQ++DI + Q+ Sbjct: 191 SLLAFAFEHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLE 250 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ A GA++ S E E+LR + +G++FQ+ DD+LD ++L Sbjct: 251 FIHIHKTAALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILDVTKSSQELG 310 Query: 236 K 236 K Sbjct: 311 K 311 >gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus] Length = 359 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N + ++E ++R++ LD + Q + + ++RY+LL GGK++R L Sbjct: 65 NFDFEAYMKEKAERVNRALDAAVAQ-------REPRWIHESMRYSLLAGGKRVRPLLCIA 117 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + TA+ A E IH SLIHDDLP MDN +RRGKPT H Y E A++AG Sbjct: 118 SCELVGGDERTAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAG 177 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177 + LL AFE +++ + + ++ IG +G++GGQ++DI E + E Q+ Sbjct: 178 DALLALAFEHVAAATEGVAPERVVRAVVEFGRYIGSEGLVGGQVVDIHSEGLAEVGVEQL 237 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT AL+ A GAI+ A E+LR F +G++FQ+ DD+LD E+L Sbjct: 238 EYIHLHKTAALLEAAVVMGAILGGADDEAVEKLRKFARCIGLLFQVVDDILDVTKSSEEL 297 Query: 235 PK 236 K Sbjct: 298 GK 299 >gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 312 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 133/242 (54%), Gaps = 16/242 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + ++ + I+ LD + + + +RL ++RY+LL GGK+IR L Sbjct: 18 EFNAYIKNVNAEIERALD-------ASVPMHYPERLSESMRYSLLAGGKRIRPALCLAAC 70 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L A+ A+E IH SLIHDDLPSMDN RRGKPT H Y E AI+AG+ Sbjct: 71 ELVGGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDA 130 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----TQV 177 LL++AFE I + + ++++ + +G +G++GGQ++DI E DE + Sbjct: 131 LLSHAFEYIGRETKGVSADKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGADEGTVTIDTL 190 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KTGAL+ + +GAI+ AS+ + +L + +N+G+ FQ+ DD+LDC E+L Sbjct: 191 KYIHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTATSEEL 250 Query: 235 PK 236 K Sbjct: 251 GK 252 >gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102] gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102] Length = 310 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 12/236 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L + L+E K D LD + + +++ A+RY+LL GGK++R L Sbjct: 16 TFNLVAYLKERQKLCDNALDRAI-------PIIYPEKIYEAMRYSLLAGGKRVRPILCLA 68 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG Sbjct: 69 TCEMMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAG 128 Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176 +GLL AFE+++ + + Q+++ L +G G++GGQ++D++ E I Sbjct: 129 DGLLALAFELVALKTPANVNRELTLQVIVRLGRALGAAGLVGGQVVDLECEGKSDISLET 188 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I + KT AL+ SG I+A AS + +RL + EN+G+ FQ+ DD+LD Sbjct: 189 LNFIHRHKTSALLEACVVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILDITS 244 >gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza] Length = 364 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 78/241 (32%), Positives = 125/241 (51%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + E + ++ LDD + ++ + A+RY+LL GGK++R L Sbjct: 71 FNFNAYVVEKANHVNKALDDAVA-------VRNPPMIHDAMRYSLLAGGKRVRPMLCIAA 123 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 124 CEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 183 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVF 178 LL +AFE +++ T + + L IG +G++ GQ++D+ D + + Sbjct: 184 ALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLE 243 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ + GAI+ S ++ E+LR F +G++FQ+ DD+LD E+L Sbjct: 244 FIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLFQVVDDILDVTKSSEELG 303 Query: 236 K 236 K Sbjct: 304 K 304 >gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073] gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073] Length = 297 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 80/236 (33%), Positives = 116/236 (49%), Gaps = 8/236 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 L S L E + + L L + + A+ Y+L GGK++R LV Sbjct: 3 TTELESYLAERRQLVQEALARNLPP-----PDTYPPAVHQAMHYSLFAGGKRLRPILVLA 57 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L A+E IH YSLIHDDLP+MDN RRG+PT H Y E A++AG Sbjct: 58 AGEAVGSQPEPLLPAACAVEFIHTYSLIHDDLPAMDNDDYRRGRPTCHKVYGEAIALLAG 117 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + LLT AFE++S + + L + G QG++GGQ++D++ E + +V Sbjct: 118 DALLTLAFEVLSRIPATIPPERILRATRELAASAGSQGLIGGQVVDMEAEGQPVTLEKVN 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 I KTG+L+ G I+ A + + L +GE LG+ FQ+ DD+LD D Sbjct: 178 YIHNHKTGSLIRACLRLGGILGGAGEEQLALLTRYGEALGLAFQITDDILDITGDF 233 >gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium] Length = 345 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 129/240 (53%), Gaps = 13/240 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + + + ++ LDD + + ++ ++RY+LL GGK++R L Sbjct: 53 FDFKSYMVQKANTVNQALDD-------AVPIREPKKIHESMRYSLLAGGKRVRPILCLAS 105 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + ++A+ A+E IH SL+HDDLP MDN RRGKPT HI Y E A++AG+ Sbjct: 106 CELVGGDQISAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHIVYGEEIAVLAGD 165 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179 LL++AFE +++ + + + L IG +G++ GQ++DI E D + Sbjct: 166 ALLSFAFEHVATATKDVSAERIVRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEF 225 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I KT AL+ + GAIM S E ERLR F ++G++FQ+ DD+LD E+L K Sbjct: 226 IHLHKTAALLEGSVVLGAIMGGGSDVEVERLRKFVRSIGLLFQVVDDILDVTKSSEELGK 285 >gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis] Length = 370 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 126/242 (52%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + S + + + I+ L+ + + Q ++ ++RY+LL GGK++R L Sbjct: 76 SFDFKSYMLQKANSINQALE-------AAIPLQEPAKIHESMRYSLLAGGKRVRPALCLA 128 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L N A+ A+ IH SLIHDDLP MDN +RRGKPT HI + E A++AG Sbjct: 129 ACELVGGNDSMAMPAACAVGMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAG 188 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + LL +AFE I+ + + + L IG +G++ GQ++DI E +D ++ Sbjct: 189 DALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKL 248 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT L+ A GAI+ + E E+LR + +G++FQ+ DD+LD ++L Sbjct: 249 EFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARGIGLLFQVVDDILDVTKSSQEL 308 Query: 235 PK 236 K Sbjct: 309 GK 310 >gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] Length = 294 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 85/239 (35%), Positives = 131/239 (54%), Gaps = 11/239 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 MN +L++ + ++ L+ L + + A+RY++LGG K++R LV Sbjct: 2 MN--FKEELKKKAALVEEALERYLPP-----PDAYPPLIHHAMRYSVLGGGKRLRPALVM 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A N L A+E IH YSL+HDDLP+MDN RRG+ T H Y E AI+A Sbjct: 55 AGAEAVGGNAADVLPAACAVELIHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAAAILA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLT AFE++++ +NI +++ G G++GGQ++D IDE+ + Sbjct: 115 GDALLTLAFELLANNDRARPENI-VRVIREAAAAAGTMGLIGGQVVDTFSAGKEIDESTL 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTGAL F+ +GA++A A + + L + E+LG+ FQ+ DD+LD E D K Sbjct: 174 EYIHRHKTGALYRFSVRAGAMLAGAQEEQLASLTAYAEHLGLAFQIKDDILDVEGDEKK 232 >gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] Length = 294 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 8/232 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +L+ + +D L++ L + + A+RY++ GGK++R L A Sbjct: 6 QLKSYALAVDKALNEYLPAAE-----VYPSTIHEAMRYSVFAGGKRLRPILTIAAAEAVG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + V A+E IH YSL+HDDLP+MDN RRG+PT H Y E AI+ G+ LLT Sbjct: 61 GSMEQVMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALLTQ 120 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 AFE+I+ ++ + +Q+ L + G G++GGQ++D +D+ ID + I + K Sbjct: 121 AFEVIAGTAVKVSPDKVNQVTLEIARAAGSLGLIGGQVVDTLSEDQVIDGQVLEYIHRHK 180 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 TGAL A +GAI++ AS E L + E +G+ FQ+ DDLLD E D K Sbjct: 181 TGALFRVAVRAGAILSGASAEELAALTTYAEQMGLAFQIKDDLLDIEGDEAK 232 >gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101] gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101] Length = 316 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 88/242 (36%), Positives = 129/242 (53%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L + L E ++ LD+ ++ + +++ A+RY+LL GGK++R L Sbjct: 23 TFDLSNYLVERKALVEKALDN-------SIKIVYPEKIYEAMRYSLLAGGKRLRPILCLA 75 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L N A+ A+E IH SLIHDDLPSMDN RRG+ T H Y E AI+AG Sbjct: 76 TCELSGGNIEMAMPTACALEMIHTMSLIHDDLPSMDNDDYRRGQLTNHKVYGEDIAILAG 135 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQV 177 +GLL+YAFE + + + Q++ L G G++GGQ++D+ E I E + Sbjct: 136 DGLLSYAFEFVVTQTKNVLPKQVLQVIARLGKASGAAGLVGGQVVDLASEGISQVSEKTL 195 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234 I KTGAL+ + GAI+A SQ RL + +N+G+ FQ+ DD+LD E+L Sbjct: 196 HFIHTHKTGALLEASVVCGAILADVSQANLYRLERYAQNIGLAFQIVDDILDITATTEEL 255 Query: 235 PK 236 K Sbjct: 256 GK 257 >gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC 6301] gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942] gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC 6301] gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942] Length = 301 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 89/243 (36%), Positives = 138/243 (56%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59 + L S L+E ++++ L+ +L Q + ++RY+LL GK++R L Sbjct: 7 LRFDLKSYLKERQRQVEAALNAIL-------PPQDPPLIYESMRYSLLAEGKRLRPILCL 59 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L AL A+E +H SLIHDDLPSMDN RRG+PT H Y E AI+A Sbjct: 60 ASCELAGGTAAIALPTACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILA 119 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQ 176 G+ LLTYAFE I+ ++ + +++ +L +G +G++GGQ++D+Q E D+ Sbjct: 120 GDALLTYAFEAIARHTPEVPADRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVNLET 179 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I KTGAL+ + SGAI+A AS+ +E+LR + + +G+ FQ+ DD+LD E+ Sbjct: 180 LHYIHTHKTGALLEVSVVSGAILAGASEELQEQLRTYAQKIGLAFQVIDDILDITATAEE 239 Query: 234 LPK 236 L K Sbjct: 240 LGK 242 >gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus] Length = 369 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 75/233 (32%), Positives = 122/233 (52%), Gaps = 11/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + + + ++ L+ S + + ++ A+RY+LL GGK++R L Sbjct: 76 FDFQSYMDQMADSVNQALE-------SAVSLREPLKIHEAMRYSLLAGGKRVRPLLCIAA 128 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 129 CELVGGDVSVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKAFGEDIAVLAGD 188 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178 LL++AFE ++ + + + L +G +G++ GQ++DI E +++ + Sbjct: 189 ALLSFAFEHVAVSTVGASPDKIVRAVGELAKAVGKEGLVAGQVVDITSEGLNDVGLDHLE 248 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT L+ A GAI+ + E ERLR F +G++FQ+ DD+LD Sbjct: 249 YIHVHKTAVLLEAAVVLGAILGGGTDEEVERLRKFAICIGLLFQVVDDILDVT 301 >gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L] gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L] Length = 309 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 88/240 (36%), Positives = 128/240 (53%), Gaps = 14/240 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L + L+E I++ LD L + D++ A+RY+LL GGK++R L Sbjct: 18 DLLTYLKERKALIESALDQALPRME-------PDKIYEAMRYSLLAGGKRLRPILCLATC 70 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L A+ A+E IH SLIHDDLP+MDN RRGK T H + E AI+AG+G Sbjct: 71 ELMGGTVEMAMPTSCALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDG 130 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179 LL YAFE ++ + Q++ L +G G++GGQ+LD++ E I E + Sbjct: 131 LLAYAFEYAAAQTKNVPAPQVLQVVAWLAKAVGASGLVGGQVLDLESEGKSDIKEETLSF 190 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I KTGAL+ G I+A A+ +RL + +N+G+ FQ+ DD+LD E+L K Sbjct: 191 IHTHKTGALLEACVVCGGILAGATAANLQRLSKYAQNIGLAFQIVDDILDITATQEELGK 250 >gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota] Length = 366 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 12/235 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 S + E + ++ LD + + Q ++ ++RY+LL GGK++R L Sbjct: 71 TFDFKSYMLEKAISVNKALD-------ASVSLQEPVKIHESMRYSLLAGGKRVRPLLSIA 123 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 LF + A+ A+E IH SL+HDDLP MDN +RRGKPT H Y E A++AG Sbjct: 124 ACELFGGHEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAG 183 Query: 121 NGLLTY-AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176 + +L AF ++++ + + ++++ L IG +G++ GQ++D+ E + Sbjct: 184 DAMLALAAFHLVATETRGVSSDQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLED 243 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + I + KT AL+ + GAI+ A+ E E++R + +G++FQ+ DD+LD Sbjct: 244 LEFIHRSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVT 298 >gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f. nagariensis] gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f. nagariensis] Length = 312 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 82/234 (35%), Positives = 127/234 (54%), Gaps = 10/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + + +K ++ LD+ + Q ++ D L ++RY+LL GGK++R L Sbjct: 19 SFDFNQYMVDRAKLVNKALDEAVPQ-------KYPDTLYESMRYSLLAGGKRVRPALCLA 71 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + AL A+E IH SLIHDDLPSMDN RRG+PT H Y E AI++G Sbjct: 72 ACELIGGDVQAALPAACAMEMIHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILSG 131 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + LLTYAFE I+ + ++++ L G +G++ GQ++DIQ E + + Sbjct: 132 DALLTYAFEHIARATKGVSAERVLRVIMELGRATGAEGLVAGQVVDIQSEDKEVGLDVLK 191 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KT AL+ + GAI+ A + E+LR + N+G+ FQ+ DD+LD + Sbjct: 192 YIHLHKTAALLEASVVCGAIVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQ 245 >gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina MBIC11017] gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina MBIC11017] Length = 301 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 84/239 (35%), Positives = 129/239 (53%), Gaps = 11/239 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N L L + + ++ LD + + + +++ A+RY+LL GGK++R L Sbjct: 8 NFNLVDYLSQRRELVEAALD-------ASIPVVYPEKIYEAMRYSLLAGGKRLRPILCLA 60 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L A+ A+E IH SLIHDDLP+MDN RRGKPT H +Y E AI+AG Sbjct: 61 ACELAGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAG 120 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 +GLL YA+E ++ Q+ +++ L H + G++GGQ++D++ E + + + Sbjct: 121 DGLLAYAYEHVAIETQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTL 180 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ + SGA +A ASQ+ R F N+G+ FQ+ DD+LD K Sbjct: 181 NFIHAHKTGALLEASVLSGAELAGASQDLLNRCSKFARNIGLAFQIIDDVLDVTATSEK 239 >gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri] gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri] Length = 345 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 133/242 (54%), Gaps = 16/242 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + ++ + +I+ LD + + + +RL ++RY+LL GGK+IR L Sbjct: 51 EFNAYIKGVNAKIERALD-------ASVPVHYPERLSESMRYSLLAGGKRIRPALCLAAC 103 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + TA+ A+E IH SLIHDDLPSMDN RRGKPT H Y E AI+AG+ Sbjct: 104 ELVGGDMETAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDA 163 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQV 177 LL++AFE I ++++ + +G +G++GGQ++DI E + + Sbjct: 164 LLSHAFEYIGRETKGASAEKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGAGPENVTVDTL 223 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KTGAL+ + +GAI+ AS+ + +L + +N+G+ FQ+ DD+LDC E+L Sbjct: 224 KYIHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTASSEEL 283 Query: 235 PK 236 K Sbjct: 284 GK 285 >gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem] gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem] Length = 295 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 131/240 (54%), Gaps = 12/240 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L L++ + +D L+ L + L ++RY++ GGK++R L+ Sbjct: 2 DLKQYLKQKCELVDQALERFLPH-----GKELPASLHGSMRYSVFAGGKRVRPVLLLAAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +AL A+E IH YSLIHDDLP+MDN RRG PT H Y E TAI+AG+ Sbjct: 57 EAVGGELNSALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179 LLT AF ++S ++ R +++ + H G +GM+GGQM+D++ E ID + Sbjct: 117 LLTEAFILLSCNGEGMEPGARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSY 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 I KTGAL+ + +GAI+ A++ + L + + +G+ FQ+ADD+LD E +L K Sbjct: 177 IHTHKTGALIRASVRAGAILGGANEETFDALTRYADAIGLAFQIADDVLDVEGTTEELGK 236 >gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501] gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501] Length = 309 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N L S L+E + ++ LD + +++ A+RY+LL GGK++R L Sbjct: 16 NFELASYLKEKKQLVEAALDQ-------SLHITRPEKIYEAMRYSLLAGGKRLRPILCLT 68 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L +L A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG Sbjct: 69 TCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 128 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177 + LL+YAFE +++ + ++ L +G G++GGQ+LD++ E + + Sbjct: 129 DALLSYAFEYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTL 188 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KTGAL+ + SGAI+A A + ERL + +N+G+ FQ+ DD+LD E+L Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASSEEL 248 Query: 235 PK 236 K Sbjct: 249 GK 250 >gi|13431547|sp|Q43133|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; Flags: Precursor gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba] Length = 366 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 82/244 (33%), Positives = 126/244 (51%), Gaps = 17/244 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + + ++ LD S + + ++ A+RY+LL GGK++R L Sbjct: 70 FDFMSYIIRKADSVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAA 122 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+ Sbjct: 123 CELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGD 182 Query: 122 GLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL++AFE ++S +++ + + L IG +G++ GQ++DI E +D Sbjct: 183 ALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLE 242 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 + I KT AL+ + G I+ S E ERLR F +G++FQ+ DD+LD + Sbjct: 243 HLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQ 302 Query: 233 DLPK 236 +L K Sbjct: 303 ELGK 306 >gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142] gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142] Length = 309 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 130/242 (53%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L S L+E + ++ LD + +++ A+RY+LL GGK++R L Sbjct: 16 DFDLASYLKEKKQLVEAALDQ-------SLPITRPEKIYEAMRYSLLAGGKRLRPILCLT 68 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L +L A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG Sbjct: 69 TCELMGGTREMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 128 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + LL+YAFE +++ + ++ L +G G++GGQ+LD++ E + + Sbjct: 129 DALLSYAFEYVATQTRNVDLANLMDVIARLGRTVGAAGLVGGQVLDLESEGRADVTVDTL 188 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234 I KTGAL+ + SGAI+A A + ERL + +N+G+ FQ+ DD+LD E+L Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDILDVTASTEEL 248 Query: 235 PK 236 K Sbjct: 249 GK 250 >gi|13431546|sp|Q42698|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase; Flags: Precursor gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus] Length = 357 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 126/240 (52%), Gaps = 14/240 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + + + ++ L+D +L + ++ ++RY+LL GGK++R L Sbjct: 65 DFKAYMIGKANSVNKALEDAVL-------VREPLKIHESMRYSLLAGGKRVRPMLCIAAC 117 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF A+ A+E IH SL+HDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 118 ELFGGTESVAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDA 177 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFM 179 LL +AFE I++ + +++ L IG +G++ GQ++D+ E I + Sbjct: 178 LLAFAFEHIATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEF 237 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I KT AL+ + GAI+ A+ + +LR F +G++FQ+ DD+LD ++L K Sbjct: 238 IHIHKTAALLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGK 297 >gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis] Length = 383 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 83/234 (35%), Positives = 127/234 (54%), Gaps = 12/234 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L+ + ++ LD + ++ +R+ A+RY+LL GGK++R L Sbjct: 89 FDFKEYLRSKAMAVNEALDR-------AVPLRYPERIHEAMRYSLLAGGKRVRPVLCISA 141 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDDLP MDN RRGKPT H + E TAI+AG+ Sbjct: 142 CELVGGTEEVAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAILAGD 201 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 LL++AFE I+ S + + +++ L IG QG++GGQ+ DI E +D + Sbjct: 202 ALLSFAFEHIAVSTSKSVGTDRILRVVSELGRTIGSQGLVGGQVADITSEGDASVDLDTL 261 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT L+ + GAI++ AS NE ER++ + ++G++FQ+ DD+LD Sbjct: 262 EWIHIHKTAVLLECSVMCGAIISGASDNEIERIQRYARSVGLLFQVVDDILDVT 315 >gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425] gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425] Length = 320 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L S L+E + +D L+ + + +++ A+RY+L+ GGK++R L Sbjct: 28 FDLVSYLKERQQWVDAALEQ-------SISVTYPEKIYQAMRYSLMAGGKRLRPILCLAT 80 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+ Sbjct: 81 CEMTGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGD 140 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 GLL YAFE ++ + +++ L H + G++GGQ++D++ E + + Sbjct: 141 GLLAYAFEYVAVKTQGVPAEWLLKVVARLGHAVAATGLVGGQVVDLECEGVKDVSVETLN 200 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KTGAL+ + GA + AS ++L + N+G+ FQ+ DD+LD E+L Sbjct: 201 FIHAHKTGALLEASVLCGAYLTGASDEVLQKLSRYARNVGLAFQIIDDVLDITATQEELG 260 Query: 236 K 236 K Sbjct: 261 K 261 >gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba] gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba] gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba] Length = 391 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 15/242 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + ++ LD + T + +++ ++RY+LL GGK++R L Sbjct: 97 FDFKKYMYSKAISVNEALD-------KAVPTHYPEKIHESMRYSLLAGGKRVRPTLCIAA 149 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH +LIHDDLP MDN +RRGKPT H + E TA++AG+ Sbjct: 150 CELVGGTEDLAMPAACAMEMIHTMTLIHDDLPCMDNDNLRRGKPTNHKAFGEDTAVLAGD 209 Query: 122 GLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 LL++AFE I+ ++ ++ R +++ L ++G +G++ GQ++DI E +D + Sbjct: 210 ALLSFAFEHIARSTSKTVESERVLRVICELGKSMGSEGLVAGQIVDIASEGDTSVDLKTL 269 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT L+ + SGAI+ AS+ E ER R + +G++FQ+ DD+LD E+L Sbjct: 270 EYIHLHKTAVLLECSVVSGAIIGGASEEEIERTRRYARCVGLLFQVVDDILDVTKTSEEL 329 Query: 235 PK 236 K Sbjct: 330 GK 331 >gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB] gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB] Length = 296 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 85/243 (34%), Positives = 129/243 (53%), Gaps = 11/243 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L L E + ++ L+D + + +L A RY+L GGK++R L Sbjct: 1 MGFDLKLYLAERKQLVEDALEDCFP-----VPSGLEKSVLEAARYSLFAGGKRLRPILCL 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + + A+ A+E IH YSLIHDDLP+MDN RRGKPT H + E A++A Sbjct: 56 AAAEVAGGSREAAMPAACALEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAVLA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ LLT AF+ +S + ++ +L G +GM+GGQ++D ++ +D V Sbjct: 116 GDALLTEAFDFVSKMDGDIPPRKILAVVATLVRASGYRGMIGGQVIDLECENRTVDLATV 175 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234 + KTGAL+ + E GA++ S + L+ +G +LG+ FQ+ DDLLD E D + Sbjct: 176 EYMHIHKTGALLSASLEVGALLGGGSDAQVSSLKRYGHHLGLAFQITDDLLDVEGDAREM 235 Query: 235 PKK 237 KK Sbjct: 236 GKK 238 >gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha haplocalyx var. piperascens] Length = 377 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 131/242 (54%), Gaps = 14/242 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + +K ++ L+ + +Q + ++ ++RY+LL GGK++R L Sbjct: 84 FDFDGYMLRKAKSVNKALE-------AAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAA 136 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SL+HDDLP MDN +RRGKPT H+ + E A++AG+ Sbjct: 137 CELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGD 196 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178 LL++AFE +++ +++ L ++G +G++ GQ++D+ E + E + Sbjct: 197 ALLSFAFEHVAAATKGAPPERIVRVLGELAVSVGSEGLVAGQVVDVCSEGMAEVGLDHLE 256 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ + GAI+ ++ E +LR F +G++FQ+ DD+LD ++L Sbjct: 257 FIHHHKTAALLQGSVVLGAILGGGNEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELG 316 Query: 236 KK 237 KK Sbjct: 317 KK 318 >gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies] Length = 386 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 82/244 (33%), Positives = 132/244 (54%), Gaps = 15/244 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 + + + ++ LD ++ ++ ++ ++RY+LL GGK++R L Sbjct: 90 VEFDFDKYMHSKAIAVNEALDKVI-------PPRYPQKIYESMRYSLLAGGKRVRPILCI 142 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L A+ AIE IH SLIHDDLP +DN +RRGKPT H + E TAIIA Sbjct: 143 AACELMGGTEELAMPTACAIEMIHTMSLIHDDLPYIDNDDLRRGKPTNHKVFGEDTAIIA 202 Query: 120 GNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDET 175 G+ LL+ AFE ++ ++ L +I +L+ + G +G++GGQ++DI+ E ID Sbjct: 203 GDALLSLAFEHVAVSTSRTLGTDIILRLLSEIGRATGSEGVMGGQVVDIESEGDPSIDLE 262 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 + + KT L+ + GAIM AS+++ ER R + +G++FQ+ DD+LD E Sbjct: 263 TLEWVHIHKTAVLLECSVVCGAIMGGASEDDIERARRYARCVGLLFQVVDDILDVSQSSE 322 Query: 233 DLPK 236 +L K Sbjct: 323 ELGK 326 >gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18] gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18] Length = 295 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 84/240 (35%), Positives = 129/240 (53%), Gaps = 12/240 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L L++ + +D L+ L + L A+RY++ GGK++R L+ Sbjct: 2 DLKEYLKQKCQLVDQALERYLPD-----GKELPASLHGAMRYSVFAGGKRVRPVLMLAAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + A+E IH YSLIHDDLP+MDN RRG PT H Y E TAI+AG+ Sbjct: 57 EAVGGSPQAVMPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179 LLT AF ++S+ R +++ + G +GM+GGQ++D++ E +D + Sbjct: 117 LLTEAFILLSANGEGGDPAARLRVIQEIAVASGSRGMVGGQVVDMESEGRHDVDLATLSY 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 I KTGAL+ + SGAIM AS+ + + L + + +G+ FQ+ADD+LD E +L K Sbjct: 177 IHTHKTGALIRASVRSGAIMGGASEEQFKALTRYADAIGLAFQIADDILDVEGTTEELGK 236 >gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9] gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9] Length = 294 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 11/237 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 +L+E + I+ L +L ++ + A++Y++ GGK++R L Sbjct: 2 FKEQLKEKQQLIEKELHRILEVE------ENPQIIYEAMKYSVFAGGKRLRPVLCLSSCE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+GL Sbjct: 56 LFEGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115 Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L AFE++ + + + + G +GM+GGQ++DI Q+ + ++ Sbjct: 116 LNLAFEVLIRHALENPHDYQRILKATNEIARASGCKGMIGGQVVDILSQNTKLTYEELKF 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + KTGAL+ + +GA +A A + + LR + +G+ FQ+ DD+LD + K Sbjct: 176 MHEHKTGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEK 232 >gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies] Length = 383 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 15/242 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++ + ++ LD + ++ +++ A+RY+LL GGK++R L Sbjct: 89 FDFKEYMRSKAMSVNEALDR-------AVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAA 141 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TA++AG+ Sbjct: 142 CELVGGSEELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGD 201 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177 LL++AFE I+ S ++ + +++ L IG +G+ GGQ+ D + + + Sbjct: 202 ALLSFAFEHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETL 261 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT L+ + SGAI+ AS +E ER+R + +G++FQ+ DD+LD E+L Sbjct: 262 EWIHIHKTAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEEL 321 Query: 235 PK 236 K Sbjct: 322 GK 323 >gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 371 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 125/238 (52%), Gaps = 15/238 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + S + ++ ++ LD S + + ++ A+ Y+LL GGK++R L Sbjct: 73 SFDFMSYIITKAELVNKALD-------SAVPLREPLKIHEAMSYSLLAGGKRVRPVLCIA 125 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG Sbjct: 126 ACELVGGEESTAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 185 Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173 + LL+++FE ++S + + + + L IG +G++ GQ++DI E +D Sbjct: 186 DALLSFSFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 245 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + I KT AL+ + GAI+ S +E ERLR F +G++FQ+ DD+LD Sbjct: 246 LEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVT 303 >gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis] Length = 383 Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 15/242 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++ + ++ LD + ++ +++ A+RY+LL GGK++R L Sbjct: 89 FDFKEYMRSKAMSVNEALDR-------AVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAA 141 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TA++AG+ Sbjct: 142 CELVGGSEELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGD 201 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177 LL++AFE I+ S ++ + +++ L IG +G+ GGQ+ D + + + Sbjct: 202 ALLSFAFEHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETL 261 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT L+ + SGAI+ AS +E ER+R + +G++FQ+ DD+LD E+L Sbjct: 262 EWIHIHKTAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEEL 321 Query: 235 PK 236 K Sbjct: 322 GK 323 >gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus] Length = 316 Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 80/233 (34%), Positives = 122/233 (52%), Gaps = 11/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + E S+ ++ L+D + H ++ A+RY+LL GGK++R L Sbjct: 23 FNFNLYMVEKSRSVNQALNDAVSLREPH-------KIHEAMRYSLLAGGKRVRPVLCIAA 75 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + N TA+ +IE IH SLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 76 CEVVGGNESTAMAAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENIAVLAGD 135 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 LL +AFE I+ + + + L +IG +G++ GQ++DI E I ++ Sbjct: 136 ALLAFAFEHIAVSTSGVSPERIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLE 195 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT AL+ + GAI+ E E+LR F +G++FQ+ DD+LD Sbjct: 196 FIHLHKTAALLEGSVVVGAILGGGCNEEVEKLRMFARYIGLMFQVVDDVLDVT 248 >gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis] gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media] gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media] gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana] Length = 393 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 132/242 (54%), Gaps = 15/242 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++ + +D LD + ++ +++ ++RY+LL GGK++R L Sbjct: 99 FDFNEYMKSKAVAVDAALD-------KAIPLEYPEKIHESMRYSLLAGGKRVRPALCIAA 151 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLP MDN RRGKPT H + E TA++AG+ Sbjct: 152 CELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGD 211 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF---IDETQV 177 LL++AFE I+ ++ + R+ ++S IG QG++GGQ++DI E +D + Sbjct: 212 ALLSFAFEHIAVATSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTL 271 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT L+ + SG I+ A+++E R+R + +G++FQ+ DD+LD E+L Sbjct: 272 EWIHIHKTAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEEL 331 Query: 235 PK 236 K Sbjct: 332 GK 333 >gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115928|ref|YP_004186087.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200] gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 294 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 11/237 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 KL+E + ++ L +L + + A+RY++ GGK++R L Sbjct: 2 FKEKLREKQQLVEKELHRILDIDEK------PEIIYEAMRYSVFAGGKRLRPVLCLSSCE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+GL Sbjct: 56 LLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115 Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L +E++ + ++ + + G +G++GGQ++DI Q+ + ++ Sbjct: 116 LNLGYEVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKF 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + KTGAL+ + +GA +A A++ E LR + +G FQ+ DD+LD + K Sbjct: 176 MHEHKTGALIEASVCAGAYIAGATEEEIHALREYARLIGFAFQIKDDILDVIGEEEK 232 >gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 294 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 83/233 (35%), Positives = 126/233 (54%), Gaps = 7/233 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 +L+E K I+D +L+ + RL A++Y+L GGK++R L + Sbjct: 2 ELKEYLKERKAIIDREILKYLPSVPP-FGKRLYEAVKYSLTVGGKRLRPILCMAGCEVVG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N+ AL AIE IH YSLIHDDLP+MDN +RRG PT ++DE TAI+AG+ LL Sbjct: 61 GNYEEALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWYKFDEATAILAGDALLNR 120 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183 AFE++S I+ + ++ G+ GM+ GQ D+ E + ++ I + Sbjct: 121 AFEVLSQWNFDCDRKIKV--IEEISKASGMLGMVLGQQCDMDAEGRKDVTLEELLFIHRH 178 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTG L+ + SG I S+ E L+ +G+++G+ FQ+ DD+LD D K Sbjct: 179 KTGRLITASVVSGGITGGGSEEEIGTLKKYGDSIGLAFQIIDDVLDVIGDQNK 231 >gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514] gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561] gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513] gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514] gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561] gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513] Length = 294 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 11/237 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 KL+E + ++ L +L + + A+RY++ GGK++R L Sbjct: 2 FKEKLREKQQLVEKELHRILDIEEK------PEIIYEAMRYSVFAGGKRLRPVLCLSSCE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+GL Sbjct: 56 LLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115 Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L +E++ + ++ + + G +G++GGQ++DI Q+ + ++ Sbjct: 116 LNLGYEVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTKLTYEELKF 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KT AL+ + +GA +A A++ + LR + +G FQ+ DD+LD + K Sbjct: 176 IHEHKTAALIEASVCAGAYIAGATEEDVHALREYARLIGFAFQIKDDILDVIGEEEK 232 >gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 294 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 11/237 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 +L+E + I+ L +L ++ + A++Y++ GGK++R L Sbjct: 2 FKEQLKEKQQLIEKELHRILEVE------ENPQIIYEAMKYSVFAGGKRLRPVLCLSSCE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+GL Sbjct: 56 LFEGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115 Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L AFE++ + + + + G +GM+GGQ++DI Q+ + ++ Sbjct: 116 LNLAFEVLIRHALENPHDYQRILKATDEIARASGCKGMIGGQVVDILSQNTKLTYEELKF 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + KTGAL+ + +GA +A A + + LR + +G+ FQ+ DD+LD + K Sbjct: 176 MHEHKTGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEK 232 >gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002] gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002] Length = 302 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 87/241 (36%), Positives = 130/241 (53%), Gaps = 15/241 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L LQE ++T LD L+ T + A+RY+LL GGK++R L Sbjct: 11 FSLAQYLQEQKTIVETALDQSLVITE-------PVTIYEAMRYSLLAGGKRLRPILCLAA 63 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + A+ A+E IH SLIHDDLP+MDN +RRGKPT H Y E AI+AG+ Sbjct: 64 CEMLGGTAAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGD 123 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178 LL+YAFE ++ + Q+++ L +G +G++GGQ++D++ E + + Sbjct: 124 ALLSYAFEYVAR-TPDVPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVAVETLN 182 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KTGAL+ +GAI+A A E + L + +N+G+ FQ+ DD+LD E+L Sbjct: 183 FIHTHKTGALLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILDITATAEELG 242 Query: 236 K 236 K Sbjct: 243 K 243 >gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies] gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis] Length = 382 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 82/234 (35%), Positives = 128/234 (54%), Gaps = 12/234 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L + ++ LD +Q ++ +++ A+RY+LL GGK++R L Sbjct: 88 FDFKEYLLSKAMAVNEALDR-------AVQLRYPEKIHEAMRYSLLAGGKRVRPVLCIAA 140 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDDLP MDN RRGKPT H + E TA++AG+ Sbjct: 141 CELVGGTEKLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAVLAGD 200 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 LL++AFE I+ S + + +++ L IG QG++GGQ+ DI E +D + Sbjct: 201 ALLSFAFEHIAVSTSKSVGSDRILRVVSELGRTIGSQGLVGGQVADITSEGNASVDLDTL 260 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT L+ + GAI++ AS+NE ER++ + ++G++FQ+ DD+LD Sbjct: 261 EWIHIHKTAVLLECSVVCGAIISGASENEIERVKRYARSVGLLFQVVDDILDVT 314 >gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A] gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A] Length = 309 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 86/241 (35%), Positives = 130/241 (53%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L S L+E + ++ LD + + +++ A+RY+LL GGK++R L Sbjct: 17 FDLVSYLKEKKQLVEAALD-------ASIPITCPEKIYEAMRYSLLAGGKRLRPILCLTT 69 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L AL A+E IH SLIHDDLP+MDN RRG+ T H Y E AI+AG+ Sbjct: 70 CELMGGTVEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGD 129 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 LL+YAFE +++ + ++ L +G G++GGQ+LD++ E I + Sbjct: 130 ALLSYAFEHVATQTHNVSLTNLVDVIARLGRTVGAAGLVGGQVLDLESEGKSNITSDILK 189 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235 I KTGAL+ + SGAI+A A+ + ERL + +N+G+ FQ+ DD+LD +L Sbjct: 190 FIHVHKTGALLETSVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDDILDITSTQAELG 249 Query: 236 K 236 K Sbjct: 250 K 250 >gi|296133204|ref|YP_003640451.1| Polyprenyl synthetase [Thermincola sp. JR] gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR] Length = 299 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 137/236 (58%), Gaps = 7/236 (2%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASL 64 + L+E ++++ I+++ L Q + ++ + + ++RY+ L GGK++R LV A Sbjct: 4 KAFLKELKRKVN-IIEEALSQYLPG-EDEYPETIHQSMRYSMLAGGKRLRPVLVLAAAEA 61 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + AIE IH YSLIHDDLP+MD+ RRGKPT H+ Y E AI+AG+ LL Sbjct: 62 VGGDVKKVIPAACAIEMIHTYSLIHDDLPAMDDDNYRRGKPTNHVVYGEAIAILAGDALL 121 Query: 125 TYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMI 180 T AFE++SS + + +++ ++ G +G++GGQ++DI E +D + I Sbjct: 122 TLAFEVLSSLVEEPGIDPQKVLRVIKEISLAAGSRGLIGGQVVDIGSENLDISAETLKYI 181 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTGAL A ++GAI++ AS+ + L + LG+ FQ+ DD+LD E D K Sbjct: 182 HIHKTGALFKAALKTGAILSSASEEQITALSRYAHFLGLGFQITDDILDIEGDTEK 237 >gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 293 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 85/232 (36%), Positives = 123/232 (53%), Gaps = 10/232 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L E + I+ L+ LL + L A+RY++ GGK++R L L Sbjct: 6 LMEKIEYINNGLNKLLDIDDK------PEILYDAMRYSVFAGGKRLRPVLCISSCELVGG 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+ LL Y Sbjct: 60 DRDDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYG 119 Query: 128 FEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184 FE++ + + + H G GM+GGQ++D +++ I E ++ + K Sbjct: 120 FEVLIHHALDSANCQNILRATEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHK 179 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 TGAL+ + +GAIM A ++L + E +G+ FQ+ DD+LD D K Sbjct: 180 TGALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESK 231 >gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9] gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9] Length = 309 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 12/236 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L + L E + D LD + + +++ A+RY+LL GGK++R L Sbjct: 15 QFNLYAYLGERQQLCDAALD-------KSIPLVYPEKIYEAMRYSLLAGGKRVRPILCLA 67 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG Sbjct: 68 TCEMIGGTIGMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAG 127 Query: 121 NGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176 +GLL +FE +++ Q + + Q++ + G G++GGQ++D+ E I Sbjct: 128 DGLLALSFEFVATQTPQTVPPDRTLQVIARMGSASGAPGLVGGQVVDLASEGQSNISLET 187 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I KT AL+ + G I+A AS + ++L C+ +N+G+ FQ+ DD+LD Sbjct: 188 LNFIHNHKTAALLEASVVCGGIIAGASPQDIQKLTCYSQNIGLAFQIIDDILDITA 243 >gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 309 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 132/242 (54%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N L S L+E +++ LD L+ + ++ A+RY+LL GGK++R L Sbjct: 16 NFSLASYLEEKRLIVESALDSSLV-------IGNPAKIYEAMRYSLLAGGKRLRPILCLA 68 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + AL A+E IH SLIHDDLP+MDN RRGK T H + E AI+AG Sbjct: 69 TCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAG 128 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 +GLL YAFE +++ + +++ L +G G++GGQ+LD++ E I + Sbjct: 129 DGLLAYAFEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETL 188 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KTGAL+ + SGA++A A + +L + +N+G+ FQ+ DD+LD E+L Sbjct: 189 GFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEEL 248 Query: 235 PK 236 K Sbjct: 249 GK 250 >gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803] gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803] Length = 302 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 91/242 (37%), Positives = 132/242 (54%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L LQ ++ LD S + +++ A+RY+LL GGK++R L Sbjct: 9 DFDLAQYLQVKKGVVEAALD-------SSLAIARPEKIYEAMRYSLLAGGKRLRPILCIT 61 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + AL A+E IH SLIHDDLPSMDN RRGKPT H Y E AI+AG Sbjct: 62 ACELCGGDEALALPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAG 121 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 +GLL YAFE + + Q Q++ L +G G++GGQ+LD++ E I + Sbjct: 122 DGLLAYAFEYVVTHTPQADPQALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITPETL 181 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KTGAL+ + +GAI+A A+ +++RL + +N+G+ FQ+ DD+LD E+L Sbjct: 182 TFIHTHKTGALLEASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEEL 241 Query: 235 PK 236 K Sbjct: 242 GK 243 >gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505] gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505] Length = 309 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 76/235 (32%), Positives = 122/235 (51%), Gaps = 12/235 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L + L E + D LD + + + + A+RY+LL GGK++R L Sbjct: 16 FNLYAYLGERQQLCDAALD-------KSIPLVYPETIYEAMRYSLLAGGKRVRPILCLAT 68 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+ Sbjct: 69 CEMIGGTIEMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGD 128 Query: 122 GLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 GLL +F+++++ Q R+ +++ + G G++GGQ++D+ E I + Sbjct: 129 GLLALSFQLVATQTPQTVPPERTLRVIARMGSASGAPGLVGGQVVDLASEGQSNISLETL 188 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KT AL+ + G I+A A+ + ++L + +N+G+ FQ+ DD+LD Sbjct: 189 NFIHNHKTAALLEASVVCGGIIAGAAPQDIQKLTRYSQNIGLAFQIIDDILDITA 243 >gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita] gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita] gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita] Length = 377 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 73/233 (31%), Positives = 125/233 (53%), Gaps = 11/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + +K ++ L+ + +Q + ++ ++RY+LL GGK++R L Sbjct: 84 FDFDGYMLRKAKSVNKALE-------AAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAA 136 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SL+HDDLP MDN +RRGKPT H+ + E A++AG+ Sbjct: 137 CELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGD 196 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178 LL++AFE +++ +++ L +IG +G++ GQ++D+ E + E + Sbjct: 197 ALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLE 256 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT AL+ + GAI+ + E +LR F +G++FQ+ DD+LD Sbjct: 257 FIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVT 309 >gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana] Length = 361 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 77/240 (32%), Positives = 124/240 (51%), Gaps = 13/240 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + E ++ LD + + + ++ ++RY+LL GGK+IR + Sbjct: 69 FNFDSYMLEKVNMVNEALD-------ASVPLKDPIKIHESMRYSLLAGGKRIRPMMCIAA 121 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + N L A+ A+E IH SL+HDDLP MDN RRGKP H Y E A++ G+ Sbjct: 122 CEIVGGNILNAMPAACAVEMIHTMSLVHDDLPCMDNDDFRRGKPISHKVYGEEMAVLTGD 181 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179 LL+ +FE I++ + + + + L ++G +G++ GQ++DI E D + Sbjct: 182 ALLSLSFEHIATATKGVSKDRIVRAIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEY 241 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 I KT L+ + GAIM S + E+LR F ++G++FQ+ DD+LD E+L K Sbjct: 242 IHIHKTAMLLESSVVIGAIMGGGSDQQIEKLRKFARSIGLLFQVVDDILDVTKSTEELGK 301 >gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var. palaestina] Length = 359 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 130/240 (54%), Gaps = 13/240 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + E ++R++ LDD + +H ++ A+RY+LL GGK++R L Sbjct: 67 FQFEEYMAEMAERVNQALDD-------SVPLRHPLKIHEAMRYSLLAGGKRVRPILCIAS 119 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + + A + A+E IH SLIHDDLP MDN RRG PT H + E TA++AG+ Sbjct: 120 CELVGGDPVAAHPIACALEMIHTMSLIHDDLPCMDNDDFRRGMPTNHKAFGEETAVLAGD 179 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL+ AFE +++ T + + +++ L +G G++GGQ++DI I+ +++ Sbjct: 180 ALLSLAFEHVATRSTGVSADRVVRVIAELGKCVGSDGLVGGQIVDIASAGKQIELSELEY 239 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I KT L+ + GAIM + ERLR + +G++FQ+ DD+LD E+L K Sbjct: 240 IHLHKTAILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILDVTKSSEELGK 299 >gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506] gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506] Length = 308 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 118/216 (54%), Gaps = 7/216 (3%) Query: 28 ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86 S + + +++ A+RY+LL GGK++R L L A+ A E H S Sbjct: 34 DSAVPVTYPEKIYEAMRYSLLAGGKRLRPILCLATCELLGGTVEMAMPTACAFEMSHTMS 93 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 LIHDDLP+MDN RRGK T H Y E AI+AG+GLL YAFE I++ + Q+ Sbjct: 94 LIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEFIAAQTQNVPPQQVLQV 153 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 + L +G ++GGQ++D++ E + E + I KTGAL+ GAI+A A Sbjct: 154 VARLGRAVGAAELVGGQVVDLESEGVSDVSEETLNFIHTHKTGALLEACVVCGAILAGAE 213 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 + +RL + +N+G+ FQ+ DD+LD E+L K Sbjct: 214 PTDLQRLSRYAQNIGLAFQIVDDILDITATQEELGK 249 >gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106] gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106] Length = 287 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 128/235 (54%), Gaps = 14/235 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + E ++ LD + + +++ A+RY+LL GGK++R L L Sbjct: 1 MAERKAEVEQALDR-------SIAVIYPEKIYEAMRYSLLAGGKRLRPILCLATCELAGG 53 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+ ++E IH SLIHDDLP+MDN RRG+ T H Y E AI+AG+GLL+YA Sbjct: 54 TMEMAMPTACSLEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYA 113 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMK 184 FE +++ T + ++ L +G G++GGQ++D++ E I E Q+ I K Sbjct: 114 FEFVATQTTNVPPQQVLDVIGHLGRAVGAAGLVGGQVVDVESEGKTDITEEQLTFIHTHK 173 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 TGAL+ SGAI+A S +ERL + + +G+ FQ+ DD+LD E+L K Sbjct: 174 TGALLEACVVSGAILAGTSTENRERLSRYAQKIGLAFQIVDDILDITATQEELGK 228 >gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21] gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21] Length = 295 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 12/240 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L L++ + +D L+ L + L ++RY++ GGK++R L+ Sbjct: 2 DLKQYLKQKCELVDQSLERFLPH-----GKELPASLHGSMRYSVFAGGKRVRPVLLLAAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 AL A+E IH YSLIHDDLP+MDN RRG PT H Y E TAI+AG+ Sbjct: 57 EAVGGALKPALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179 LLT AF ++S + R +++ + H G +GM+GGQM+D++ E ID + Sbjct: 117 LLTEAFILLSGNGEGVDPAARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSY 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 I KTGAL+ + +GAI+ A + + L + + +G+ FQ+ADD+LD E +L K Sbjct: 177 IHTHKTGALIRASVRAGAILGGADEEAFDALTRYADAIGLAFQIADDVLDVEGTTEELGK 236 >gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens] gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens] Length = 288 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 79/235 (33%), Positives = 130/235 (55%), Gaps = 14/235 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 ++ ++ ++ LD + Q+ +++ A+RY+LL GGK++R L L Sbjct: 1 MKSKAQAVNVALD-------KAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGG 53 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N ++ A+E +H SLIHDDLP MDN +RRGKPT H + E TA++AG+ LLTYA Sbjct: 54 NEEMSMPAACAMEMVHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLTYA 113 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMK 184 FE I+ T + + +++ L +G +G++ GQ++DI E + + + K Sbjct: 114 FEHIARDTTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDPTVGLETLEYVHTHK 173 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 T L+ + GAI+ AS++E RL + N+G++FQ+ DD+LD +L K Sbjct: 174 TAVLLESSVVCGAILGGASEDEISRLSKYARNVGLLFQVVDDILDVTKSSAELGK 228 >gi|307265160|ref|ZP_07546719.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919782|gb|EFN49997.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 294 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 11/237 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 KL+E + ++ L +L + + A+RY++ GGK++R L Sbjct: 2 FKEKLREKQQLVEKELHRILDIDEK------PEIIYEAMRYSVFAGGKRLRPVLCLSSCE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+GL Sbjct: 56 LLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115 Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L +E++ + ++ + + G +G++GGQ++DI Q+ + ++ Sbjct: 116 LNLGYEVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKF 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + KTGAL+ + +GA +A A++ E LR + +G FQ+ DD+LD + K Sbjct: 176 MHEHKTGALIEASVCAGAYIASATEEEIHALREYARLIGFAFQIKDDILDVIGEEEK 232 >gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301] gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301] Length = 299 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L++ K I+ LD + ++ + L ++RY+LL GGK+IR L Sbjct: 7 SYDFEKYLKQTKKVIEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLA 59 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 SL A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG Sbjct: 60 SCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAG 119 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + LLT AFE++S + N ++ L+ G G++GGQ++D++ E +D + Sbjct: 120 DALLTRAFEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLDTLE 179 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ +GA++A A++ + L + E +G+ FQ+ DD+LD K Sbjct: 180 YIHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEK 237 >gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza] Length = 364 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + E + ++ LDD + ++ + A+RY+LL GGK++R L Sbjct: 71 FNFNAYVVEKANHVNKALDDAVA-------VRNPPMIHDAMRYSLLAGGKRVRPMLCIAA 123 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + A+ A+E IH SLIHDDLP MDN +RRGKPT H + + A++AG+ Sbjct: 124 CEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGKDVAVLAGD 183 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVF 178 LL +AFE +++ T + + L IG +G++ GQ++D+ D + + Sbjct: 184 ALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLE 243 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ + GAI+ S ++ E+LR F +G++ Q+ DD+LD E+L Sbjct: 244 FIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLLQVVDDILDVTKSSEELG 303 Query: 236 K 236 K Sbjct: 304 K 304 >gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii] gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii] Length = 345 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 76/234 (32%), Positives = 128/234 (54%), Gaps = 10/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + + + +K ++ +D+ + ++ + L ++RY+LL GGK++R L Sbjct: 52 SFDFNTYMVDRAKLVNKAMDE-------AVPLKYPETLNESMRYSLLAGGKRVRPALCLA 104 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + AL A+E +H SLIHDDLPSMDN RRG+PT H Y E AI+AG Sbjct: 105 ACELVGGDIHAALPAACAMEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAG 164 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + LL+++FE I+ + ++++ L +G G++ GQ++DIQ E + + Sbjct: 165 DALLSFSFEHIARATKGVPAERVLRVIMELGKAVGQDGLVAGQVVDIQSEDKEVGLDVLK 224 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I + KT AL+ + GAI+ A ++ E+LR + N+G+ FQ+ DD+LD Sbjct: 225 YIHEHKTAALLEASVVCGAILGGADESTIEKLRKYSLNIGLAFQVIDDILDVTA 278 >gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus elongatus BP-1] gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus elongatus BP-1] Length = 307 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 79/235 (33%), Positives = 125/235 (53%), Gaps = 11/235 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L + L+E ++ L+ + + + +++ A+RY+L+ GGK++R L Sbjct: 14 TFDLKAYLKERQALVEAALE-------ASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLA 66 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L A+ A+E IH SLIHDDLP+MDN RRGKPT H Y E AI+AG Sbjct: 67 TCELMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAG 126 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 +GLL YAFE + + +++ L H + G++GGQ++D++ E I + Sbjct: 127 DGLLAYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETL 186 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ + SGA++ A +++ RL + N+G+ FQ+ DD+LD Sbjct: 187 HFIHSHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITS 241 >gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515] gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515] Length = 300 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 10/237 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L+E K ++ LD + ++ + L ++RY+LL GGK+IR L Sbjct: 9 SDFDKYLKETKKIVEEALD-------LSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 SL A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ Sbjct: 62 CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE++S + N ++ L+ G G++GGQ++D++ E +D + Sbjct: 122 ALLTRAFEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ +GA++A A+ + L + E +G+ FQ+ DD+LD K Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANDELLKALTTYAEGIGLAFQIIDDILDLTSSSEK 238 >gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312] gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT 9312] Length = 300 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 10/237 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L+ K ++ LD + ++ + L ++RY+LL GGK+IR L Sbjct: 9 SDFEEYLKNAKKVVEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 SL A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ Sbjct: 62 CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE++S + ++ L+ G G++GGQ++D++ E +D + Sbjct: 122 ALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ +GA++A A++ + L + E +G+ FQ+ DD+LD K Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANEETLQALTTYAEGIGLAFQIIDDILDLTSSSEK 238 >gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus elongatus] Length = 307 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 125/235 (53%), Gaps = 11/235 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + L+E ++ L+ + + + +++ A+RY+L+ GGK++R L Sbjct: 14 TFDVKAYLKERQALVEAALE-------ASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLA 66 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L A+ A+E IH SLIHDDLP+MDN RRGKPT H Y E AI+AG Sbjct: 67 TCELMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAG 126 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 +GLL YAFE + + +++ L H + G++GGQ++D++ E I + Sbjct: 127 DGLLAYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETL 186 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ + SGA++ A +++ RL + N+G+ FQ+ DD+LD Sbjct: 187 HFIHSHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITS 241 >gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus str. MIT 9202] gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus str. MIT 9202] Length = 300 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 10/237 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L+ K ++ LD + ++ + L ++RY+LL GGK+IR L Sbjct: 9 SDFEKYLKNTKKVVEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 SL A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ Sbjct: 62 CSLAGGKPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE++S + ++ L+ G G++GGQ++D++ E +D + Sbjct: 122 ALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ +GA++A A++ + L + E +G+ FQ+ DD+LD K Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEK 238 >gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis] Length = 387 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 83/244 (34%), Positives = 126/244 (51%), Gaps = 15/244 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 + + + + LD + + + ++ ++RY+LL GGK++R L Sbjct: 91 VEFDFNKYMLSKAMAVTEALDKAIPHS-------YPQKIHESMRYSLLAGGKRVRPVLCI 143 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L A+ A+E IH SLIHDDLP MDN +RRGKPT H + + TA++A Sbjct: 144 AACELVGGREELAMPTACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGQDTALLA 203 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDET 175 G+ L +AFE I++ + + + + L G QG++GGQ++DI +D F+D Sbjct: 204 GDALHAFAFEHIVAFTSKSVGSDGILRAVTELARATGPQGIMGGQIVDIASERDAFVDLQ 263 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 + I KT L A GAI+ AS +E ER+R F LG++FQ+ DD+LD E Sbjct: 264 TLEWIHIHKTAVLFECATVCGAIIGGASGDEIERIRRFARYLGLLFQVVDDILDVTKSSE 323 Query: 233 DLPK 236 DL K Sbjct: 324 DLGK 327 >gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa] gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa] Length = 314 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 79/240 (32%), Positives = 125/240 (52%), Gaps = 13/240 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 + K+++ L++ + QH ++ A+RY+LLG GK++ L Sbjct: 22 FQFKEYMLTKLKQVNEALEE-------AVPLQHPIKIHEAMRYSLLGNGKRMCPILCIAS 74 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ + A+E +H SLIHDDLP MDN +RRGKPT H + E AI+AG+ Sbjct: 75 CELVGGDEELAMPLACALEMVHAMSLIHDDLPCMDNDDLRRGKPTNHKVFGECIAILAGD 134 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL+ AFE I+S + + + + L IG +G++ GQ++DI E + + Sbjct: 135 ALLSLAFEHIASKTKNVSPDCVVRAIAELGSAIGSRGVVAGQIVDIDSEGKEVSMKTLEY 194 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I KT L+ + GAIM A ERLR + ++G+++Q+ DD+LD E+L K Sbjct: 195 IHVHKTAKLLEASAVCGAIMGGADDASIERLRKYARSIGLLYQVVDDILDATKSSEELGK 254 >gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215] gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215] Length = 300 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 10/237 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L+ K ++ LD + ++ + L ++RY+LL GGK+IR L Sbjct: 9 SDFEKYLKNTKKVVEEALD-------VSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 SL A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ Sbjct: 62 CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE++S + ++ L+ G G++GGQ++D++ E +D + Sbjct: 122 ALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ +GA++A A++ + L + E +G+ FQ+ DD+LD K Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEK 238 >gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter tengcongensis MB4] gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter tengcongensis MB4] Length = 294 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 81/241 (33%), Positives = 125/241 (51%), Gaps = 14/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 K + + ++ L +L + + A+RY++ GGK++R L Sbjct: 2 FKEKFKNLQQMVEEELHRILDVQEK------PEIIYEAMRYSVFAGGKRLRPVLCLSACE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + AL V +IE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GL Sbjct: 56 LLGGDLKKALPVACSIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAILAGDGL 115 Query: 124 LTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L +E++ + + + + G +G++GGQ+ DI Q+ + ++ Sbjct: 116 LNLGYEVLIRHALENPEDYEKILKAANEIATASGCKGIIGGQVEDILSQNTELTYEELKY 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 I + KT AL+ + +GA MA AS+ E E LR + +G+ FQ+ DD+LD D L K Sbjct: 176 IHEHKTAALIEASVCAGAHMAGASEKEVELLREYAGLIGLAFQIKDDILDVIGDEKTLGK 235 Query: 237 K 237 K Sbjct: 236 K 236 >gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901] gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901] Length = 295 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 9/237 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 S + K ++ + L + + + A+ Y+L GGK++R L+ Sbjct: 2 EFESLFKRYRKMVEEGIGRFLPPDDT-----YPPVIHQAMNYSLKAGGKRLRPVLMLAAG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + L +EC+H YSLIHDDLP+MDN RRGKPT H + E AI+AG+ Sbjct: 57 EWSGIAPEKLLPAAVGVECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDA 116 Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179 LLT AFE+ + + + + +++ L G +G++ GQ++D+ D + Sbjct: 117 LLTKAFELTAKTLEQGIPAERVVRVIQELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLY 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KT L+ ++ +G I+A A++ E + L +G +LG+ FQ+ DDLLD D K Sbjct: 177 IHLNKTARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQK 233 >gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 371 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 79/235 (33%), Positives = 124/235 (52%), Gaps = 15/235 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + S + ++ ++ LD S + + ++ A+RY+LL GGK++R L Sbjct: 73 SFDFMSYIITKAELVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIA 125 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG Sbjct: 126 ACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 185 Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173 + LL++AFE ++S + + + + L IG +G++ GQ++DI E +D Sbjct: 186 DALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 245 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I KT AL+ + AI+ S +E ERLR F +G++FQ+ DD+L Sbjct: 246 LEHLEFIHLHKTAALLEASAVLRAIVGGGSDDEIERLRKFARCIGLLFQVVDDIL 300 >gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A] gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A] Length = 299 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 121/234 (51%), Gaps = 10/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L++ R++ LD + + + ++L ++RY+LL GGK++R L Sbjct: 7 SFDFAEYLEKARTRVEDALD-------ASLGPEKPEKLRESMRYSLLAGGKRLRPILCLA 59 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L AL A+E IH SLIHDDLPSMDN +RRG+PT H Y + AI+AG Sbjct: 60 ACELAGGELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAG 119 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178 + LLT AFE++S + +++ L+ G G++GGQ LD + + +D + Sbjct: 120 DALLTRAFEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLE 179 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ GA++ A + E L + +G+ FQ+ DD+LD Sbjct: 180 YIHLHKTGALLKACVTCGALIGGADEKLLEALSIYARGIGLAFQIIDDILDVTA 233 >gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC 15579] gi|187773137|gb|EDU36939.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC 15579] Length = 290 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 87/236 (36%), Positives = 139/236 (58%), Gaps = 12/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L+ +L+ Sbjct: 3 KIKKIGEEIELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLLLNTYALYK 57 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 A I+ + +N ++ G+ GM+GGQ++DI +D+ I +++ + K K Sbjct: 118 AMNIMFEYSLKNGENALKAC-YTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK Sbjct: 177 TGALIKASILAGAILGSATSTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232 >gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 297 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 90/239 (37%), Positives = 134/239 (56%), Gaps = 11/239 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L ++ N +D L + L ++++ + A+ Y++ GGK++R L Sbjct: 2 SLDVFMKNNKNLVDQKLQEYLPN-----KSEYPTAIHEAMHYSVFAGGKRLRPLLTLAAG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF N T L AIE IH YSLIHDDLP++DN +RRGK T H+ + E AI+AG+ Sbjct: 57 DLFGANKKTILPFACAIELIHTYSLIHDDLPALDNDDLRRGKSTNHVVFGEDIAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177 LL YAFE+++S + + R+ + + G +GM+GGQ++DI+ E ID V Sbjct: 117 LLNYAFELMTSKGVENFTDARTPLWAISEVAKASGTKGMIGGQVVDIKSEKNADIDLETV 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I K KTGAL + GAI++ ASQ + E+L + + LG+ FQ+ DD+LD E D K Sbjct: 177 SYIHKHKTGALFTASIRIGAILSQASQADLEKLTTYAQKLGLAFQVVDDILDIEGDEQK 235 >gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii] gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii] Length = 366 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 84/243 (34%), Positives = 131/243 (53%), Gaps = 15/243 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L S LQ ++ LD+ L ++ D++ A+RY+LL GGK++R L Sbjct: 71 SFDLQSYLQFKGVAVNAALDEAL-------PMRYPDKIHEAMRYSLLAGGKRVRPILCIA 123 Query: 61 CASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TA++A Sbjct: 124 ASEMIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLA 183 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQ 176 G+ +L+ AFE I+ + +++ L +G QG++ GQ++DI E +D Sbjct: 184 GDAMLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDT 243 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I KTG L+ A GAI AS+ E R+R + + +G++FQ+ DD+LD ++ Sbjct: 244 LRYIHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQE 303 Query: 234 LPK 236 L K Sbjct: 304 LGK 306 >gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414] gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414] Length = 309 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 123/236 (52%), Gaps = 12/236 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L + LQ+ K +T LD + + +++ ++RY+LL GGK++R L Sbjct: 15 TFNLAAYLQKRKKLCETALDQAI-------PVIYPEKIYESMRYSLLAGGKRLRPILCLA 67 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + A+ A+E IH SLIHDDLP+MDN RRG+ T H Y + AI+AG Sbjct: 68 ACEMIGGTISMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAG 127 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF---IDETQ 176 +GLL YAFE +++ + R +++ +G G++GGQ++D+ E I Sbjct: 128 DGLLAYAFEFVATQTPENVSRERVLQVIARLGKALGAAGLVGGQVVDLDSEGKTDISLET 187 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I KT AL+ + G I+A AS +RL + +N+G+ FQ+ DD+LD Sbjct: 188 LNFIHNHKTAALLEASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILDITA 243 >gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545] gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545] Length = 343 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 14/236 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + + + +K I+ L D + + + +RL ++RY+LL GGK+IR L Sbjct: 48 DFGNYIADKNKAIEQALSDSVPEM-------YPERLHESMRYSLLAGGKRIRPCLCIAAC 100 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L A+ A+E IH SLIHDDLPSMDN RRGKPT H Y E AI+AG+ Sbjct: 101 ELMGGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDA 160 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLT-HNIGLQGMLGGQMLDIQDEFID-----ETQ 176 LL++AFE I + R+ +L +G +G++GGQ++DI E D Sbjct: 161 LLSHAFEYIGRETPKSVPAERTLRVLVDVGKCVGSEGLVGGQVVDIMSEGADADEVTLET 220 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I KTGAL+ + SGAI+A A + + ERL + + +G+ FQ+ DD+LDC + Sbjct: 221 LKYIHAHKTGALLEVSVTSGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQ 276 >gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 300 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 82/236 (34%), Positives = 125/236 (52%), Gaps = 10/236 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L + K ++ LD + ++ + L ++RY+LL GGK+IR L Sbjct: 10 DFEKYLTDTKKVVEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLASC 62 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 SL A+ AIE IH SLIHDDLP+MDN RRG+PT H Y + AI+AG+ Sbjct: 63 SLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDGFRRGRPTNHKVYGDAIAILAGDA 122 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LLT AFE++S + N ++ L+ G G++GGQ++D++ E +D + I Sbjct: 123 LLTRAFEMVSLRSPGVDSNRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYI 182 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTGAL+ + +GA++A A++ L + E +G+ FQ+ DD+LD K Sbjct: 183 HLHKTGALLKASVRTGAMIAGANEELLNALTTYAEGIGLAFQIIDDILDLTSSSEK 238 >gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307] gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307] Length = 300 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 81/233 (34%), Positives = 124/233 (53%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L+ +++ LD S + + + L A+RY+LL GGK++R L Sbjct: 9 FDFSHYLEAGRLKVEQALD-------SSLGPERPESLREAMRYSLLAGGKRLRPILCLAS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + AL A+E IH SLIHDDLP+MDN +RRG+PT H Y + TAI+AG+ Sbjct: 62 CELAGGDASLALPTATALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDATAILAGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE+++ + +++ L+ G G++GGQ++D+ E +D + Sbjct: 122 ALLTRAFEMVALRSPDVPAERLLKVIGELSLAAGAPGLVGGQIVDLASEGVEVDLDTLEY 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ + SGA++A A E LR + +G+ FQ+ DD+LD Sbjct: 182 IHLHKTGALLQASVLSGALIAGADDTLLEALRTYSRAIGLAFQIIDDILDVTA 234 >gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522] gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522] Length = 295 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 102/236 (43%), Positives = 138/236 (58%), Gaps = 10/236 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 NG L E K+ID L ++ +Q L A+ Y+L GGK+IR L+ Sbjct: 3 NGTLKHFFDEEKKQIDNRLPHIIENLNIPVQ------LRDAMIYSLKAGGKRIRPMLLLA 56 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +N V AIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG Sbjct: 57 TLRGYNKPLSHGYDVACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAG 116 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVF 178 +GLLTY+F++ISS L DN++ L+ ++ G +GM+GGQ+LD+Q E I Q+ Sbjct: 117 DGLLTYSFQLISSS-MLLPDNVKLLLIQKMSQAAGPEGMVGGQVLDMQGEGITLSVDQLQ 175 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 I KTG L+ + ESGAI+A S+NE+ L F ++LGI FQ+ DD+LD E D Sbjct: 176 KIHHHKTGDLLAVSVESGAILAGVSENERISLTSFAKHLGIAFQIKDDILDVEGDE 231 >gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601] gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601] Length = 300 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 81/237 (34%), Positives = 124/237 (52%), Gaps = 10/237 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L+ K ++ LD + ++ + L ++RY+LL GGK+IR L Sbjct: 9 SDFEKYLKNTKKVVEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 SL A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ Sbjct: 62 CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE++S + ++ L+ G G++GGQ++D++ E +D + Sbjct: 122 ALLTRAFEMVSLRSPGVDPTRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLKTLEY 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ +GA++A A++ L + E +G+ FQ+ DD+LD K Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANEKLLHALTTYAEGIGLAFQIIDDILDLTSSSEK 238 >gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa NIES-843] gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa NIES-843] Length = 309 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 131/242 (54%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L S L+E +++ LD L+ + ++ A+RY+LL GGK++R L Sbjct: 16 SFSLASYLEEKRLIVESALDSSLV-------IGNPAKIYEAMRYSLLAGGKRLRPILCLA 68 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + AL A+E IH SLIHDDLP+MDN RRGK T H + E AI+AG Sbjct: 69 TCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAG 128 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQV 177 +GLL YAFE +++ + +++ L +G G++GGQ+LD++ I + Sbjct: 129 DGLLAYAFEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETL 188 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KTGAL+ + SGA++A A + +L + +N+G+ FQ+ DD+LD E+L Sbjct: 189 GFIHTQKTGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEEL 248 Query: 235 PK 236 K Sbjct: 249 GK 250 >gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805] gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805] Length = 315 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 123/234 (52%), Gaps = 10/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + L + ++ LD + + + + L ++RY+LL GGK++R L Sbjct: 23 DFDFSAYLAKTRNLVEGALD-------AALGPERPESLRESMRYSLLAGGKRLRPILCLA 75 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A+ A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG Sbjct: 76 ACELVGGDASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAG 135 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + LL+ AFE++S + +++ L G G++GGQ++D++ E +D + Sbjct: 136 DALLSRAFEMVSLRSPGVPPERLLKVVAELALVSGAPGLVGGQVVDLESEGREVDLETLE 195 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KT AL+ +GA++ A N+ E +R + +G+ FQ+ DD+LD Sbjct: 196 YIHLHKTAALLRACVVTGALIGGADANQVEAMRTYANGIGLAFQIVDDILDVTA 249 >gi|303239901|ref|ZP_07326424.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2] gi|302592611|gb|EFL62336.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2] Length = 297 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 84/246 (34%), Positives = 126/246 (51%), Gaps = 16/246 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN Q + ++ LD+ + + + SA+RY+LL GGK++R L Sbjct: 1 MN--FKENQQRYADLVNAFLDNYVKENDL-----LEKSVYSAMRYSLLAGGKRLRPVLAL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L + + AIE +H YSLIHDDLP+MDN RRGK T H ++ E AI+A Sbjct: 54 AVCELLGGDINEVMPFACAIEMVHTYSLIHDDLPAMDNDDFRRGKLTNHKKFGEAIAILA 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSL---THNIGLQGMLGGQMLDIQDEFIDE-- 174 G+GLL AFE++ N Q + ++ + G+ GM+ GQ++D + E + Sbjct: 114 GDGLLNLAFELMIESTATDNCNNAVQKVKAMSYIAKSSGIHGMIAGQVIDTESENKEVAY 173 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232 + + K KTGAL+ S AI+ +AS+ + L + NLG+ FQ+ DD+LD E Sbjct: 174 ETLEYMHKCKTGALIKAPVVSSAIICNASEEDLRSLEAYAGNLGLAFQIKDDILDVEGST 233 Query: 233 -DLPKK 237 L KK Sbjct: 234 EKLGKK 239 >gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 300 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 79/233 (33%), Positives = 126/233 (54%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L + RI++ LD + + + ++L A+RY+LL GGK++R L Sbjct: 9 FDFTAYLAKARTRIESALD-------ASLGPERPNQLREAMRYSLLAGGKRLRPILCLAA 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ AIE IH SLIHDDLPSMDN +RRG+PT H Y E AI+AG+ Sbjct: 62 CELTGSDSENAISTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGEAIAILAGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE+++ + + +++ L+ G G++GGQ+ D++ E +D + Sbjct: 122 ALLTRAFEMVALRSPNVPKDRLLKVVGELSLVAGAPGLVGGQVEDLESEGKAVDLDTLEF 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ + GA++ A ++ L + + +G+ FQ+ DD+LD Sbjct: 182 IHIHKTGALLKASVVCGALIGGADEDLLIALSTYAKGIGLAFQIVDDILDVTA 234 >gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413] gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413] Length = 309 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 123/235 (52%), Gaps = 12/235 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L + L+E K + LD+ + + +++ ++RY+LL GGK++R L Sbjct: 16 FNLVAYLKERQKLCEAALDEAI-------PVIYPEKIYESMRYSLLAGGKRLRPILCLAT 68 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + A+ A+E IH SLIHDDLP+MDN RRG T H Y + AI+AG+ Sbjct: 69 SEMMGGTIEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGDDIAILAGD 128 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 GLL YAFE ++ + + Q++ L +G G++GGQ++D+ E I + Sbjct: 129 GLLAYAFEFVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDISLETL 188 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KT AL+ G I+A AS + +RL + +N+G+ FQ+ DD+LD Sbjct: 189 NFIHNHKTAALLEACVVCGGILAGASSEDVQRLSRYSQNIGLAFQIIDDILDITS 243 >gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 369 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 126/242 (52%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 S + + + I+ LD + + + ++ ++RY+LL GGK++R L Sbjct: 75 TFDFKSYMLQKAASINQALD-------AAVPIREPTKIHESMRYSLLAGGKRVRPALCLA 127 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L N A+ A+E IH SLIHDDLP MDN +RRGKPT HI + E A++AG Sbjct: 128 ACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAG 187 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177 + LL AFE I+ + + + L IG +G++ GQ++DI E + E ++ Sbjct: 188 DALLALAFEHIAIATLNVSPARIVRAVGELAKAIGAEGLVAGQVVDICSEGLSEVGLEKL 247 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT L+ A GAIM + E E+LR + ++G++FQ+ DD+LD ++L Sbjct: 248 EFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQEL 307 Query: 235 PK 236 K Sbjct: 308 GK 309 >gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa] gi|1345836|sp|P48368|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog; Short=GGPP synthase; AltName: Full=Farnesyltranstransferase gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa] Length = 300 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 84/239 (35%), Positives = 128/239 (53%), Gaps = 11/239 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 N L + L E + ++ L+ + + + +IRY+L GGK+IR L Sbjct: 7 NFNLLTYLYERKEIVEDTLN-------KSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLA 59 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L AL A+E IH SLIHDDLP+MDN RRGKPT HI Y E AI+AG Sbjct: 60 SCELAGGTMEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAG 119 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178 + LL YAFE I++ + ++ +++ + H++ G++GGQ++D+ E +T + Sbjct: 120 DALLAYAFEFIATQTKNVPADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETL 179 Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ A SGA++A A + + R + +N+G+ FQ+ DD+LD K Sbjct: 180 NFIHIHKTGALLEAAVLSGALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEK 238 >gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299] gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299] Length = 349 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 128/236 (54%), Gaps = 14/236 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + + E + I+ L D + + + +RL ++RY+LL GGK+IR L Sbjct: 54 DFAAYIAEKNAAIEQALSDSVPEM-------YPERLHESMRYSLLAGGKRIRPCLCIAAC 106 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L A+ A+E IH SLIHDDLPSMDN RRGKPT H Y E AI+AG+ Sbjct: 107 ELMGGTMDVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDA 166 Query: 123 LLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQ 176 LL++AFE I + ++++ + +G +G++GGQ++DI E + Sbjct: 167 LLSHAFEYIGRETPKSVPAERTLRVIVDVGKCVGSEGLVGGQVVDIMSEGAEAGEVTVET 226 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I KTGAL+ + +GAI+A A + + ERL + + +G+ FQ+ DD+LDC + Sbjct: 227 LQYIHAHKTGALLEVSVTAGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQ 282 >gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313] gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313] Length = 306 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 122/233 (52%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 P+ L ++ LDD + + ++L A+RY+LL GGK++R L Sbjct: 15 FDFPAYLAAAKASVEEALDD-------SLGPERPEQLREAMRYSLLAGGKRLRPILCLAA 67 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L AL A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ Sbjct: 68 CELAGGEPAEALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGD 127 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT +FE+++ + +++ L+ G G++GGQ++D++ E +D + Sbjct: 128 ALLTRSFEMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEF 187 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ GA++ A + + LR + +G+ FQ+ DD+LD Sbjct: 188 IHLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTA 240 >gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916] gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916] Length = 317 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L + ++ LDD + + + L A+RY+LL GGK++R L Sbjct: 20 FDFKAYLGSQKQLVEAALDD-------SLGPERPESLREAMRYSLLAGGKRLRPILCLAA 72 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ Sbjct: 73 CELAGGDPALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGD 132 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179 LLT AFE++S + +++ L+ G G++GGQ++D + + +D + Sbjct: 133 ALLTRAFEMVSLRSPGVPAERLLKVVAELSLVAGAPGLVGGQVVDLECEGKDVDLDTLEY 192 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ +GA++ A + + + LR + +G+ FQ+ DD+LD Sbjct: 193 IHLHKTGALLKACVITGALIGGADEAQLDSLRTYARGIGLAFQIVDDILDVTA 245 >gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto] gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto] Length = 290 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 87/236 (36%), Positives = 138/236 (58%), Gaps = 12/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+ Sbjct: 3 KIKKMGEEIELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 A I+ + + + ++ G+ GM+GGQ++DI +D+ I +++ + K K Sbjct: 118 AMNIMFEYSLKNGEKA-VKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232 >gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120] gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120] Length = 309 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 79/235 (33%), Positives = 123/235 (52%), Gaps = 12/235 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L + L+E K + LD + + + +++ ++RY+LL GGK++R L Sbjct: 16 FNLVAYLKERQKLCEAALD-------AAIPIIYPEKIYESMRYSLLAGGKRLRPILCLAT 68 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + A+ A+E IH SLIHDDLP+MDN RRG T H Y E AI+AG+ Sbjct: 69 SEMMGGTIEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGD 128 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178 GLL YAFE ++ + + Q++ L +G G++GGQ++D+ E +T + Sbjct: 129 GLLAYAFEFVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDTSLETL 188 Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KT AL+ G I+A AS +RL + +N+G+ FQ+ DD+LD Sbjct: 189 NFIHNHKTAALLEACVVCGGILAGASSENVQRLSRYSQNIGLAFQIIDDILDITS 243 >gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland] gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland] Length = 290 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 87/236 (36%), Positives = 137/236 (58%), Gaps = 12/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+ Sbjct: 3 KIKKMGEEIELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 A I+ + + ++ G+ GM+GGQ++DI +D+ I +++ + K K Sbjct: 118 AMNIMFEYSLKNGEKALKAC-YTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232 >gi|170761674|ref|YP_001787211.1| geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree] gi|169408663|gb|ACA57074.1| putative geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree] Length = 290 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 88/236 (37%), Positives = 138/236 (58%), Gaps = 12/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+ Sbjct: 3 KIKKMGEEIELWLKEYLDNKGN-----YDKKIYEAMIYSLEAGGKRIRPVLFLNTYSLYK 57 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 A I+ + + ++T G+ GM+GGQ++DI +D+ I +++ + K K Sbjct: 118 AMNIMFEYSLKNGEEALKAC-YTITKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232 >gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63] gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08] gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07] gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08] gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07] Length = 295 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 76/237 (32%), Positives = 129/237 (54%), Gaps = 9/237 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L+E + ++ +L + + + + +T ++ A+ Y+L GGK++R L E Sbjct: 2 EFKQCLKEKASFVEKVLKEYMPKEEGYQKT-----VIEAMNYSLSAGGKRLRPILTLEAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + N A+ AIE IH YSLIHDDLP++DN +RRG+PT H Y E I+AG+ Sbjct: 57 KIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDA 116 Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL YAFE +++ + + + + G+ GM+GGQ++D++ E I++ ++ Sbjct: 117 LLNYAFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDY 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KT A+M +GA + A+ + E + + +N+G+ FQ+ DD+LD D K Sbjct: 177 IHMNKTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDESK 233 >gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803] gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803] Length = 312 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 72/233 (30%), Positives = 124/233 (53%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S L + + ++ LD + + + + L ++RY+LL GGK++R L Sbjct: 21 FDFSSYLAKTRELVEQSLD-------AALGPERPESLRESMRYSLLAGGKRLRPILCLAA 73 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ Sbjct: 74 CELVGGDASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGD 133 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL+ AFE+++ + +++ L+ G G++GGQ++D++ E +D + Sbjct: 134 ALLSRAFEMVAVRSEGVPPERLLKVVAELSLVSGAPGLVGGQVVDLESEGREVDLETLEY 193 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KT AL+ +GA++ A ++ + +R + +G+ FQ+ DD+LD Sbjct: 194 IHLHKTAALLRACVVTGALIGGADASQVDAMRTYANGIGLAFQIVDDILDVTA 246 >gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630] gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26] gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932] gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42] gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255] gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55] gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34] gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79] gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196] gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291] gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58] gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile] gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196] gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291] Length = 295 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 76/237 (32%), Positives = 129/237 (54%), Gaps = 9/237 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L+E + ++ +L + + + + +T ++ A+ Y+L GGK++R L E Sbjct: 2 EFKQCLKEKASFVEKVLKEYMPKEEGYQKT-----VIEAMNYSLSAGGKRLRPILTLEAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + N A+ AIE IH YSLIHDDLP++DN +RRG+PT H Y E I+AG+ Sbjct: 57 KIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDA 116 Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL YAFE +++ + + + + G+ GM+GGQ++D++ E I++ ++ Sbjct: 117 LLNYAFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDY 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KT A+M +GA + A+ + E + + +N+G+ FQ+ DD+LD D K Sbjct: 177 IHMNKTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAK 233 >gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM 16646] gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM 16646] Length = 296 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 85/238 (35%), Positives = 126/238 (52%), Gaps = 10/238 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 +L+E K I+ LD + ++ ++ ++ A+RY+ GGK+IR L + A Sbjct: 3 NFEIELKEAGKIIEKALDFYIPKSN-----EYPQKIHEAMRYSTFNGGKRIRPVLTMKAA 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF + + IE IH YSLIHDDLP MDN RRGKPT H + + A++AG+ Sbjct: 58 ELFGLQGEKVIPTACGIEMIHTYSLIHDDLPIMDNDDFRRGKPTCHKVFGDAIALLAGDA 117 Query: 123 LLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 LLT AF I + ++ ++ G GM+GGQ +DI + IDE +F Sbjct: 118 LLTLAFNTIVKNAQIEGISMQAVIDVIGRISRASGSLGMIGGQTVDILSQGVSIDEKTLF 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTG L+ + +GA +A A ++ +L FGE +G+IFQ+ DDLLD D K Sbjct: 178 YMDYHKTGCLIQASLWAGARLAEAPASDLNKLDIFGEKIGLIFQIVDDLLDICGDEKK 235 >gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A] gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A] Length = 299 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 76/234 (32%), Positives = 120/234 (51%), Gaps = 10/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L++ R++ L + + + ++L ++RY+LL GGK++R L Sbjct: 7 SFDFAEYLEKARTRVEDAL-------GASLGPEKPEKLRESMRYSLLAGGKRLRPILCLA 59 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L AL A+E IH SLIHDDLPSMDN +RRG+PT H Y + AI+AG Sbjct: 60 ACELAGGELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAG 119 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178 + LLT AFE++S + +++ L+ G G++GGQ LD + + +D + Sbjct: 120 DALLTRAFEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLE 179 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ GA++ A + + L + +G+ FQ+ DD+LD Sbjct: 180 YIHLHKTGALLKACVTCGALIGGADEKLLDALSIYARGIGLAFQIIDDILDVTA 233 >gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205] Length = 312 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L+ + ++++ LD + + + L A+RY+LL GGK++R L Sbjct: 19 FDFAAYLESSRQQVEQALD-------GSLGPERPESLREAMRYSLLAGGKRLRPILCLAA 71 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLP+MDN +RRG PT H Y E AI+AG+ Sbjct: 72 CELAGGDAALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGD 131 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179 LLT AFE+++ + +++ L+ G G++GGQ++D + + +D + Sbjct: 132 ALLTRAFEMVALRSPGVPAEQLIKVVGELSLASGAPGLVGGQVVDLECEGKDVDLETLEY 191 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ +GA++A AS+ L + +G+ FQ+ DD+LD Sbjct: 192 IHLHKTGALLRSCVLTGALIAGASEALLAALTTYARGIGLAFQIIDDILDVTA 244 >gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana] Length = 348 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 80/243 (32%), Positives = 124/243 (51%), Gaps = 17/243 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 S + + ++ LD S + + ++ AIRY+LL GK++R L Sbjct: 53 FDFTSYMIGKANAVNEALD-------SAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAA 105 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L AL A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 106 CELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 165 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ----- 176 L+++AFE +++ T + + + L IG +G++ GQ++D+ +D+ Sbjct: 166 ALISFAFEHLATS-TAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEV 224 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I KT L+ A GAI+ S E E+LR F +G++FQ+ DD+LD E+ Sbjct: 225 LEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEE 284 Query: 234 LPK 236 L K Sbjct: 285 LGK 287 >gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides] Length = 288 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 76/223 (34%), Positives = 126/223 (56%), Gaps = 7/223 (3%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 D + + + ++ ++ ++RY+ L GGK++R L L TA+ A+ Sbjct: 6 DSVNKALEATVLLRYPIKIHESMRYSILAGGKRVRPLLCIAACELVGGQESTAMPAACAV 65 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SL+HDDLP MDN +RRGKPT H+ + E A++AG+ LL +AFE+I++ T + Sbjct: 66 EMIHTMSLMHDDLPCMDNDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTGVP 125 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESG 196 + +++ L +IG +G++ GQ++DI E + + + I KT AL+ + G Sbjct: 126 ADRIVRVIGELAKSIGSEGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEGSVVLG 185 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 AI+ A+ E E+LR F +G +FQ+ DD+LD ++L K Sbjct: 186 AILGGATDPEVEKLRKFARCIGFLFQVVDDILDVTKSSQELGK 228 >gi|15224197|ref|NP_179452.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75268021|sp|Q9ZU77|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7, chloroplastic; Short=GGPP synthase 7; Short=GGPS7; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7; AltName: Full=Dimethylallyltranstransferase 7; AltName: Full=Farnesyl diphosphate synthase 7; AltName: Full=Farnesyltranstransferase 7; AltName: Full=Geranyltranstransferase 7; Flags: Precursor gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP synthetase/farnesyltranstransferase [Arabidopsis thaliana] gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana] Length = 347 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 80/243 (32%), Positives = 124/243 (51%), Gaps = 17/243 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 S + + ++ LD S + + ++ AIRY+LL GK++R L Sbjct: 53 FDFTSYMIGKANAVNEALD-------SAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAA 105 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L AL A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 106 CELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 165 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ----- 176 L+++AFE +++ T + + + L IG +G++ GQ++D+ +D+ Sbjct: 166 ALISFAFEHLATS-TAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEV 224 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I KT L+ A GAI+ S E E+LR F +G++FQ+ DD+LD E+ Sbjct: 225 LEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEE 284 Query: 234 LPK 236 L K Sbjct: 285 LGK 287 >gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20] gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20] Length = 298 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 12/241 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 +L++ + ++ LD ++Q ++ L SA+RY+L+ GGK++R L Sbjct: 5 EFKQQLEKYADIVNEYLDRCIVQNELPEKS-----LYSAMRYSLMAGGKRLRPVLSLAVC 59 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + L A+E IH YSLIHDDLP+MDN RRG+PT H Y E AI+AG+G Sbjct: 60 DMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDG 119 Query: 123 LLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL AFEI+ + D R S+ + G+ GM+ GQ++D++ E +D + Sbjct: 120 LLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNR 179 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + ++KTGAL+ S AI+ A ++ ++L F ENLG+ FQ+ DD+LD E L K Sbjct: 180 MHRLKTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGK 239 Query: 237 K 237 K Sbjct: 240 K 240 >gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405] gi|125713574|gb|ABN52066.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405] Length = 295 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 12/241 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 +L++ + ++ LD ++Q ++ L SA+RY+L+ GGK++R L Sbjct: 2 EFKQQLEKYADIVNEYLDRCIVQNELPEKS-----LYSAMRYSLMAGGKRLRPVLSLAVC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + L A+E IH YSLIHDDLP+MDN RRG+PT H Y E AI+AG+G Sbjct: 57 DMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDG 116 Query: 123 LLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL AFEI+ + D R S+ + G+ GM+ GQ++D++ E +D + Sbjct: 117 LLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNR 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + ++KTGAL+ S AI+ A ++ ++L F ENLG+ FQ+ DD+LD E L K Sbjct: 177 MHRLKTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGK 236 Query: 237 K 237 K Sbjct: 237 K 237 >gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211] gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211] Length = 300 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 81/234 (34%), Positives = 124/234 (52%), Gaps = 10/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + L + R++ LD + + + +L A+RY+LL GGK++R L Sbjct: 8 SFDFAAYLAKEKIRVEAALD-------ASLGPERPKQLREAMRYSLLAGGKRLRPILCLA 60 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L TAL AIE IH SLIHDDLPSMDN +RRG+PT H Y + AI+AG Sbjct: 61 ACELIAGESETALPTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDALAILAG 120 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178 + LLT AFE++S + +++ L+ G G++GGQ+ D + + +D + Sbjct: 121 DALLTRAFEMVSLRSPGISAERLIKVVGELSLVAGAPGLVGGQVADLECEGKDVDIDTLE 180 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ + GA++ A + + LR + E +G+ FQ+ DD+LD Sbjct: 181 YIHIHKTGALLKASVVCGALIGGAKDDLLDALRTYAEAIGLAFQIIDDILDVTS 234 >gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916] gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916] Length = 290 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 86/236 (36%), Positives = 138/236 (58%), Gaps = 12/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+ Sbjct: 3 KIKKMGEEIELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 A I+ + + + ++ G+ GM+GGQ++DI +D+ I +++ + K K Sbjct: 118 AMNIMFEYSLKNGEKA-VKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L K+ Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKE 232 >gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360] gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360] gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313] Length = 298 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 86/241 (35%), Positives = 133/241 (55%), Gaps = 12/241 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 +L++ + ++ LD +++ ++ L SA+RY+L+ GGK++R L Sbjct: 5 EFKQQLEKYADIVNEYLDRCIVKNELPEKS-----LYSAMRYSLMAGGKRLRPVLSLAVC 59 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + L A+E IH YSLIHDDLP+MDN RRG+PT H Y E AI+AG+G Sbjct: 60 DMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDG 119 Query: 123 LLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL AFEI+ + D R S+ + G+ GM+ GQ++D++ E +D + Sbjct: 120 LLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNR 179 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + ++KTGAL+ S AI+ A ++ ++L F ENLG+ FQ+ DD+LD E L K Sbjct: 180 MHRLKTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGK 239 Query: 237 K 237 K Sbjct: 240 K 240 >gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp. lyrata] gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp. lyrata] Length = 403 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 18/244 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 + G + ++ I+ LD + + A+RY + GGK++R L Sbjct: 109 DFGFKPYMIRKAETINRALD-------KAIPLIEPLNIYKAMRYTIFAGGKRVRPILCLA 161 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L +A+ ++E IH SLI DDLP MDN +RRGKPT H + E AI++G Sbjct: 162 ACELVGGGERSAIPAACSVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSG 221 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL AFE ++ K +R + L +IG +G++ GQ +D+ E +D Sbjct: 222 GALLALAFEHLTEADVSSKKMVRV--VKELAKSIGTKGLVAGQAMDLSSEGLDPNDFRLE 279 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 + I KTGAL+ + GA++ S+ E E++R F +G++FQ+ DD+LD E Sbjct: 280 DLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRSFARCIGLLFQVVDDILDETKSSE 339 Query: 233 DLPK 236 +L K Sbjct: 340 ELGK 343 >gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis] Length = 381 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 77/236 (32%), Positives = 121/236 (51%), Gaps = 12/236 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 + + + ++ L+ + ++ ++ ++RY+LL GGK++R L Sbjct: 85 VEFDFNKYMDSKAMTVNEALN-------KAIPLRYPQKIYESMRYSLLAGGKRVRPVLCI 137 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L A+ AIE IH SL+HDDLP +DN +RRGKPT H + E TA+ A Sbjct: 138 AACELVGGTEELAIPTACAIEMIHTMSLMHDDLPCIDNDDLRRGKPTNHKIFGEDTAVTA 197 Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDET 175 GN L +YAFE I+ S + + +++ L G +G++GGQM+DI E ID Sbjct: 198 GNALHSYAFEHIAVSTSKTVGADRILRMVSELGRATGSEGVMGGQMVDIASEGDPSIDLQ 257 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + I KT L+ + GAI+ AS+ ER R + +G++FQ+ DD+LD Sbjct: 258 TLEWIHIHKTAMLLECSVVCGAIIGGASEIVIERARRYARCVGLLFQVVDDILDVT 313 >gi|323705302|ref|ZP_08116877.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535204|gb|EGB24980.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 293 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 86/232 (37%), Positives = 122/232 (52%), Gaps = 10/232 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L+E + I+ L++ L T + L A++Y++ GGK++R L L Sbjct: 6 LREKIEYINKGLNEFLS------LTDRPEVLFEAMKYSVFAGGKRLRPVLCISACELVGG 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+ LL Y Sbjct: 60 NKEDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYG 119 Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 FE +I K + + G +GM+ GQ++D+ E I E + + K Sbjct: 120 FEVLIQQALNSNKSQNILKAADEIARAAGCRGMIAGQVVDLLSENKEIGEYDLKFMHDHK 179 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 TGAL+ + +GAI+ A ++L + E LG FQ+ DD+LD + D K Sbjct: 180 TGALIKASILAGAIIGGADAATLKKLSSYAEYLGFAFQVKDDILDVQGDEAK 231 >gi|237795298|ref|YP_002862850.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str. 657] gi|229262575|gb|ACQ53608.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str. 657] Length = 290 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 86/236 (36%), Positives = 136/236 (57%), Gaps = 12/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K+++ + ++ L + L + ++ ++ A+ Y+L GGK+IR L SL+ Sbjct: 3 KIKKMGEEVELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 A I+ + + ++ G+ GM+GGQ++DI +D+ I ++ + K K Sbjct: 118 AMNIMFEYSLKNGEKALKAC-YTIAKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232 >gi|168184569|ref|ZP_02619233.1| geranyltranstransferase [Clostridium botulinum Bf] gi|182672379|gb|EDT84340.1| geranyltranstransferase [Clostridium botulinum Bf] Length = 290 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 87/236 (36%), Positives = 136/236 (57%), Gaps = 12/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+ Sbjct: 3 KIKKMGEEIELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 A I+ + + ++ G+ GM+GGQ++DI +D+ I ++ + K K Sbjct: 118 AMNIMFEYSLKNGEKALKAC-YTIAKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232 >gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303] gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303] Length = 306 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 122/233 (52%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 P+ L ++ LDD + + ++L A+RY+LL GGK++R L Sbjct: 15 FDFPAYLAAAKASVEEALDD-------SLGPERPEQLREAMRYSLLAGGKRLRPILCIAA 67 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L AL A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+ Sbjct: 68 CELAGGEPTQALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGD 127 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT +FE+++ + +++ L+ G G++GGQ++D++ E +D + Sbjct: 128 ALLTRSFEMVALRSKGVAPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEF 187 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ GA++ A + + LR + +G+ FQ+ DD+LD Sbjct: 188 IHLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTA 240 >gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311] gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311] Length = 312 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 73/234 (31%), Positives = 126/234 (53%), Gaps = 10/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L+ + R++ LD + M + + L A+RY+LL GGK++R L Sbjct: 20 TFDFANYLKLSRDRVEIALD-------ASMGPERPESLRDAMRYSLLAGGKRLRPILCLA 72 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A+ A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG Sbjct: 73 ACELVGGSSELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAG 132 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + +L+ AFE+++ + + +++ L G G++GGQ++D++ E +D + Sbjct: 133 DAMLSRAFEMVAVRSANVPADRLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLE 192 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KT AL+ +GA++ A+ ++ + +R + +G+ FQ+ DD+LD Sbjct: 193 YIHLHKTAALLRACVVTGALIGGANDDQLQAMRTYANGIGLAFQIIDDILDVTA 246 >gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter sp. Re1] gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter sp. Re1] Length = 296 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 84/237 (35%), Positives = 132/237 (55%), Gaps = 11/237 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN +++ ++ ++ L L + + +L A+ Y+ L GGK++R +V Sbjct: 1 MN-KFEGEMKYMAQVVEQELSRYLPRKD-----EFPSKLHEAMHYSTLSGGKRLRPIIVM 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + A LF +++ + IE IH YSLIHDDLP MDN RRGKPT H Y + A++A Sbjct: 55 KAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPVMDNDDFRRGKPTCHKIYGDAVALLA 114 Query: 120 GNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175 G+ LLT+AF I+ + + + ++ ++ G GM+GGQ +DI + + Sbjct: 115 GDALLTHAFATIAKNSKISGINPDAVVDVIEKVSLAAGGYGMIGGQTVDIITSGKDVSRD 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +F I KTG LM + SGA +A AS+ + E ++CFGE LG+IFQ+ DD+LD + Sbjct: 175 TLFYISTHKTGCLMSVSFWSGARLAGASKEDLETIKCFGEKLGLIFQIVDDILDIKG 231 >gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1] gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1] Length = 294 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 95/235 (40%), Positives = 131/235 (55%), Gaps = 8/235 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L L + +++ LD LL + L A+RY+LL GGK++R L C Sbjct: 2 ELKPYLADRKYLVESALDRLLPAAD-----REPRALTGAMRYSLLIGGKRLRPILTLACC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 A+ A+EC+H YSLIHDDLP+MDN +RRG PT H QY E TAI+AG+ Sbjct: 57 EAVGGALERAMNFACAMECVHTYSLIHDDLPAMDNDDLRRGHPTCHRQYGEATAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMI 180 LLT+AFE+ + P T + R +L+ L G GM+GGQMLDIQ E Q+ I Sbjct: 117 LLTHAFELAAKPVTGVLPEARLELIGELAMAAGTYGMVGGQMLDIQGEKRPLELVQLQNI 176 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL+ AC +GA + + ++ + L+ +GE LG+ FQ+ DD+LD D Sbjct: 177 HIHKTGALIRVACLAGARLGGGTPDQVKHLKRYGEALGLAFQITDDILDEVGDTK 231 >gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Syntrophus aciditrophicus SB] gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase [Syntrophus aciditrophicus SB] Length = 308 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 86/237 (36%), Positives = 129/237 (54%), Gaps = 12/237 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + ++E RID +D L + + L A+RY+L GGK+IR L A Sbjct: 12 DLNAYIKEKKLRIDEAIDRYLP-----GEEESPGELFKAMRYSLFAGGKRIRPILCLAAA 66 Query: 63 SLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 V+ L V A+E IH YSLIHDDLP+MDN RRGKPT H + + AI+AG Sbjct: 67 EAVGTSVSSDCLLPVACALEYIHTYSLIHDDLPAMDNDDYRRGKPTSHKVFGDALAILAG 126 Query: 121 NGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQ 176 + LLT AFE+++ T L I +++ + G GM+GGQ+ D++ E + Sbjct: 127 DALLTEAFELMTRTDFHTGLAPEILLRVIREIAAAAGAFGMVGGQVEDLRAEGKPGNLDT 186 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + I KTGA++ + +GAI++ S+ L +G +G++FQ+ADD+L+ E D Sbjct: 187 LNRIHNRKTGAMIVVSLRAGAILSGGSEQAVSALTDYGHKIGLVFQIADDILNVEGD 243 >gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ipp gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ipp gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (I) gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (I) gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (Ii) gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (Ii) gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands Length = 295 Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 73/233 (31%), Positives = 125/233 (53%), Gaps = 11/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + +K ++ L+ + +Q + ++ ++RY+LL GGK++R L Sbjct: 2 FDFDGYMLRKAKSVNKALE-------AAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAA 54 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SL+HDDLP MDN +RRGKPT H+ + E A++AG+ Sbjct: 55 CELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGD 114 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178 LL++AFE +++ +++ L +IG +G++ GQ++D+ E + E + Sbjct: 115 ALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLE 174 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT AL+ + GAI+ + E +LR F +G++FQ+ DD+LD Sbjct: 175 FIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVT 227 >gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410699|gb|ABP67703.1| farnesyl-diphosphate synthase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 298 Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 82/242 (33%), Positives = 123/242 (50%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 + L L+ ++ID LD LL + D + A+RY++ GGK++R L Sbjct: 3 SERLTEYLKYAQEKIDKHLDSLLGKN-------SPDVIYEAMRYSVFAGGKRLRPILCLL 55 Query: 61 CASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 L + L + AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E AI+ Sbjct: 56 SYELLSGKEADEKVLDIACAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAIL 115 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQD---EFIDE 174 AG+ LL A E+ + + K G +GM+GGQ++D+ + E +E Sbjct: 116 AGDALLNKAAEVCFNWILRNKAKENFIKAAEYLFKASGTEGMIGGQVIDVVNSGKEITEE 175 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 ++ + KT L+ +C GA +A A + +G+NLG+ FQ+ DD+LD D Sbjct: 176 NLLYEMHLKKTSKLIQASCVCGAYVAGAKEEVISDFEEYGKNLGLAFQIRDDILDFIGDS 235 Query: 235 PK 236 K Sbjct: 236 KK 237 >gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101] Length = 310 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 76/234 (32%), Positives = 123/234 (52%), Gaps = 10/234 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + L+ + +++ LD + + + L ++RY+LL GGK++R L Sbjct: 16 SFDFAAYLEASRLKVEAALD-------GSLGPERPESLRESMRYSLLAGGKRLRPILCLA 68 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A+ A+E IH SLIHDDLP+MDN +RRG PT H Y E AI+AG Sbjct: 69 ACELAGGDSAQAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAG 128 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178 + LLT AFE+++ + +++ L+ G G++GGQ++D + + +D + Sbjct: 129 DALLTRAFEMVALRSPGVPAEQLLKVVGELSLASGAPGLVGGQVVDLECEGKNVDLETLE 188 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ +GA++A A E LR + +G+ FQ+ DD+LD Sbjct: 189 YIHLHKTGALLRACVLTGALIAGAPDALLEALRTYARGIGLAFQIIDDILDVTA 242 >gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii] gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii] Length = 327 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 84/243 (34%), Positives = 131/243 (53%), Gaps = 15/243 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L S LQ ++ LD+ L ++ D++ A+RY+LL GGK++R L Sbjct: 32 SFDLQSYLQFKGVAVNAALDEAL-------PMRYPDKIHEAMRYSLLAGGKRVRPILCIA 84 Query: 61 CASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TA++A Sbjct: 85 ASEMIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLA 144 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQ 176 G+ +L+ AFE I+ + +++ L +G QG++ GQ++DI E +D Sbjct: 145 GDAMLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDM 204 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I KTG L+ A GAI AS+ E R+R + + +G++FQ+ DD+LD ++ Sbjct: 205 LRYIHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQE 264 Query: 234 LPK 236 L K Sbjct: 265 LGK 267 >gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora] gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora] Length = 300 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 80/233 (34%), Positives = 122/233 (52%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L+ + ++ LD + T+ L A+RY+LL GGK++R L Sbjct: 9 FDFAAYLRAARESVELALD-------GSLGTERPTSLSEAMRYSLLAGGKRLRPILCLAA 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L N A+ A+E IH SLIHDDLP+MDN +RRG+PT H Y E TAI+AG+ Sbjct: 62 CELAGGNVAAAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEATAILAGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFEI++ + +++ L+ G G++GGQM+D++ E ++ + Sbjct: 122 ALLTRAFEIVALRSPGVSPECILKVIGELSLAAGAPGLVGGQMVDLESEGKEVNLDTLEY 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ G ++ AS + LR + +G+ FQ+ DD+LD Sbjct: 182 IHLHKTGALLSACVICGGLIGDASDELLQALRNYARGIGLAFQIIDDILDVTA 234 >gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis] Length = 383 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 15/242 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L + ++ L+ + ++ +++ A+RY+LL GGK+IR L Sbjct: 89 FDFKEYLHSKAISVNEALER-------AVPLRYPEKIHEAMRYSLLAGGKRIRPILTIAA 141 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLPSMDN +RRGK T H + E TA++AG+ Sbjct: 142 CELVGGSEELAMPTACAMEMIHTMSLIHDDLPSMDNDDLRRGKLTNHKVFGEGTAVLAGD 201 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 LL++AFE I+ S + + + +++ L IG QG+ GGQ+ DI E + + Sbjct: 202 ALLSFAFEHIAVSTRKTVASHRVLRVVSELGKAIGSQGVAGGQVADITSEGDPSVGLETL 261 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT L+ A SGAI+ AS+NE ER + +G++FQ+ DD+LD E+L Sbjct: 262 EWIHIHKTAVLLECAVVSGAIIGGASENEIERTGRYARCVGLLFQVVDDILDVTRSSEEL 321 Query: 235 PK 236 K Sbjct: 322 GK 323 >gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065] Length = 284 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 86/230 (37%), Positives = 134/230 (58%), Gaps = 12/230 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+ ++ A Sbjct: 3 EEIELWLKEHLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKA 57 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+ Sbjct: 58 MPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF 117 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMC 190 + + + ++ G+ GM+GGQ++DI +D+ I +++ + K KTGAL+ Sbjct: 118 EYSLKNGEKA-VKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIK 176 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK Sbjct: 177 SSILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 226 >gi|148379844|ref|YP_001254385.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502] gi|148289328|emb|CAL83424.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502] Length = 294 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 136/236 (57%), Gaps = 12/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 ++++ + I+ L + L + ++ + A+ Y+L GGK+IR L SL+ Sbjct: 7 RIKKMGEEIELWLKEYLDNKGN-----YDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL Sbjct: 62 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 121 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 A I+ + + + ++ G+ GM+GGQ++DI +D+ I +++ + K K Sbjct: 122 AMNIMFEYSLKNGEKAL-EACYAIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 180 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL+ + +GAI+ + + E L +G+NLG+ FQ+ DD+LD E D L KK Sbjct: 181 TGALIKASILAGAILGSDTYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 236 >gi|170757695|ref|YP_001781434.1| geranyltranstransferase [Clostridium botulinum B1 str. Okra] gi|169122907|gb|ACA46743.1| putative geranyltranstransferase [Clostridium botulinum B1 str. Okra] Length = 290 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 86/236 (36%), Positives = 135/236 (57%), Gaps = 12/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K+++ + I+ L L + ++ ++ A+ Y+L GGK+IR L SL+ Sbjct: 3 KIKKMGEEIELWLKGYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 A I+ + + ++ + GM+GGQ++DI +D+ I +++ + K K Sbjct: 118 AMNIMFEYSLKNGEKALKAC-YTIAKAAEVDGMIGGQVVDILSEDKSITLDELYYMHKKK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232 >gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797] gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797] Length = 298 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 7/232 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 +E + T+++ L + A L +A+ Y+L GGK++R LV Sbjct: 8 FKEMWSNLQTLVNRQL-EEALDQSGDCPPILKAAMSYSLSAGGKRLRPILVLLSCEACGG 66 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + TAL AIE +H YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+ LLT A Sbjct: 67 DQSTALPAACAIEMVHTYSLIHDDLPAMDDDELRRGLPTSHIKFGEANAILAGDALLTRA 126 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMK 184 FE++++ + + + L + G GM+GGQ+ D++ E + + I K K Sbjct: 127 FELLANQIE--VKSCAAACCVDLANAAGAVGMVGGQVADLESEHLENPTLEILEAIHKRK 184 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 TG L+C A GA + A + L +G +G+ FQ+ DDLLD D K Sbjct: 185 TGRLICSALTMGARIGGADPATLKNLERYGTCIGLAFQITDDLLDLTGDEEK 236 >gi|153937414|ref|YP_001387682.1| geranyltranstransferase [Clostridium botulinum A str. Hall] gi|152933328|gb|ABS38827.1| putative geranyltranstransferase [Clostridium botulinum A str. Hall] Length = 290 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 136/236 (57%), Gaps = 12/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 ++++ + I+ L + L + ++ + A+ Y+L GGK+IR L SL+ Sbjct: 3 RIKKMGEEIELWLKEYLDNKGN-----YDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 A I+ + + + ++ G+ GM+GGQ++DI +D+ I +++ + K K Sbjct: 118 AMNIMFEYSLKNGEKAL-EACYAIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL+ + +GAI+ + + E L +G+NLG+ FQ+ DD+LD E D L KK Sbjct: 177 TGALIKASILAGAILGSDTYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232 >gi|167464892|ref|ZP_02329981.1| Polyprenyl synthetase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 303 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 82/239 (34%), Positives = 126/239 (52%), Gaps = 10/239 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G + + LQ +++++ L+ L +Q + L ++ Y+L+ GGK+IR LV Sbjct: 7 GSIQAYLQTRARQVEEALEGSLP-----VQWEFPADLRESMLYSLMAGGKRIRPVLVLAA 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 F + + V AIE IH YSLIHDDLP+MDN RRGKPT H ++ E AI+AG+ Sbjct: 62 VESFGLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRGKPTNHKKFGEAMAILAGD 121 Query: 122 GLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 LLT+AF ++ Q ++ ++ G +GM+GGQ D+Q ++ Sbjct: 122 ALLTHAFYSVTQAARQGGFSAEQVLAVVEEISVYAGARGMVGGQAADMQGVQGITRLEEL 181 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KT L+ + +GAI+A A + + L FG +G+ FQ+ DD+LD D K Sbjct: 182 EYIHACKTSDLIICSLRAGAILAGADEKQLRALTVFGSCIGMAFQIMDDILDVAGDEAK 240 >gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1] gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1] Length = 297 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 88/241 (36%), Positives = 135/241 (56%), Gaps = 11/241 (4%) Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58 MN + LQ+ +R++ L + + A+ + + A+ Y+L GGK+IR L+ Sbjct: 1 MNRAEVERFLQQQKQRLENALPHYITRMAA------PETIKRAMSYSLEAGGKRIRPLLL 54 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 F L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+ Sbjct: 55 FATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAIL 114 Query: 119 AGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175 AG+GLLTYAF++I+ ++ + +L+ L G +GM+ GQ+ DI+ E + Sbjct: 115 AGDGLLTYAFQVIAEANDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLE 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q+ I + KTG ++ ++ +GA++A A+ + +L F +LG+ FQ+ DD+LD E Sbjct: 175 QLEYIHRHKTGKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEE 234 Query: 236 K 236 K Sbjct: 235 K 235 >gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70] gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70] Length = 297 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 87/241 (36%), Positives = 131/241 (54%), Gaps = 11/241 (4%) Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58 MN + LQ+ +R++ L + + + + A+ Y+L GGK+IR L+ Sbjct: 1 MNRAEVEQFLQQQKQRLEESLPHYIARLNA------PGTIKRAMSYSLEAGGKRIRPLLL 54 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 F L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+ Sbjct: 55 FATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAIL 114 Query: 119 AGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175 AG+GLLTYAF++I+ ++ + +L+ L G +GM+ GQ+ DI+ E + Sbjct: 115 AGDGLLTYAFQVIAEMSDARIVPATKIRLIEELAKAAGPEGMVAGQVADIEGEGKQLSLE 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q+ I + KTG ++ ++ +GA++A A + L F +LG+ FQ+ DD+LD E Sbjct: 175 QLEYIHRHKTGKMLQYSVLAGALLADAKDEQLHHLHTFASHLGLAFQIRDDILDIEGSEE 234 Query: 236 K 236 K Sbjct: 235 K 235 >gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii] Length = 360 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 11/232 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + E + ++ L+ S + + + ++RY+LL GGK+IR L Sbjct: 68 EFKEYVLEKAISVNKALE-------SAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAAC 120 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+ Sbjct: 121 ELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDA 180 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFM 179 LL AFE I++ + + +++ L IG +G++ GQ++DI E I D + Sbjct: 181 LLALAFEHIATHTKGVSSDRIVRVIGELAKCIGAEGLVAGQVVDIISEGISDVDLKHLEF 240 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT AL+ + GAI+ A + E+LR F +G++FQ+ DD+LD Sbjct: 241 IHLHKTAALLEGSVVLGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVT 292 >gi|295399115|ref|ZP_06809097.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|294978581|gb|EFG54177.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93] Length = 297 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 88/241 (36%), Positives = 135/241 (56%), Gaps = 11/241 (4%) Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58 MN + LQ+ +R++ L + + A+ + + A+ Y+L GGK+IR L+ Sbjct: 1 MNRAEVERFLQQQKQRLENALPHYITRMAA------PETIKRAMSYSLEAGGKRIRPLLL 54 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 F L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+ Sbjct: 55 FATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAIL 114 Query: 119 AGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175 AG+GLLTYAF++I+ ++ + +L+ L G +GM+ GQ+ DI+ E + Sbjct: 115 AGDGLLTYAFQVIAEADDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLE 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q+ I + KTG ++ ++ +GA++A A+ + +L F +LG+ FQ+ DD+LD E Sbjct: 175 QLEYIHRHKTGKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEE 234 Query: 236 K 236 K Sbjct: 235 K 235 >gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus] Length = 319 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 129/237 (54%), Gaps = 10/237 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L E + ++T L + + + +L A+ Y+L GGK+IR L+ Sbjct: 5 SVEQFLNEQKQAVETALSRYIERL------EGPAKLKKAMAYSLEAGGKRIRPLLLLSTV 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+G Sbjct: 59 RALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDG 118 Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAF++I + + ++R +L+ L G +GM+ GQ D++ E + +++ Sbjct: 119 LLTYAFQLIVEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTG ++ ++ +GA++ A + L F +LG+ FQ+ DD+LD E K Sbjct: 179 IHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEK 235 >gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp. lyrata] gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp. lyrata] Length = 372 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 117/244 (47%), Gaps = 18/244 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 + ++ ++ LD+ + ++ A+RYA L GK++R L Sbjct: 78 TFEFDPYMISKAESVNKALDEAI-------PVGEPLKIHEAMRYAILAAGKRVRPILCLA 130 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L A+ A+E IH SLI DDLP MDN +RRGKPT H Y E AI++G Sbjct: 131 SCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSG 190 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL+ AFE +++ ++ + L +IG +G++ GQ +DI E +D Sbjct: 191 GALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLE 248 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 + I KT L+ A GAI+ S E E +R F +G++FQ+ DD+LD E Sbjct: 249 HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSE 308 Query: 233 DLPK 236 +L K Sbjct: 309 ELGK 312 >gi|322382773|ref|ZP_08056617.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153242|gb|EFX45688.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 298 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 82/239 (34%), Positives = 126/239 (52%), Gaps = 10/239 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G + + LQ +++++ L+ L +Q + L ++ Y+L+ GGK+IR LV Sbjct: 2 GSIQAYLQTRARQVEEALEGSLP-----VQWEFPADLRESMLYSLMAGGKRIRPVLVLAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 F + + V AIE IH YSLIHDDLP+MDN RRGKPT H ++ E AI+AG+ Sbjct: 57 VESFGLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRGKPTNHKKFGEAMAILAGD 116 Query: 122 GLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 LLT+AF ++ Q ++ ++ G +GM+GGQ D+Q ++ Sbjct: 117 ALLTHAFYSVTQAARQGGFSAEQVLAVVEEISVYAGARGMVGGQAADMQGVQGITRLEEL 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KT L+ + +GAI+A A + + L FG +G+ FQ+ DD+LD D K Sbjct: 177 EYIHACKTSDLIICSLRAGAILAGADEKQLRALTVFGSCIGMAFQIMDDILDVAGDEAK 235 >gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In Complex With Ggpp gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In Complex With Ggpp Length = 293 Score = 241 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 79/232 (34%), Positives = 119/232 (51%), Gaps = 14/232 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S + + ++ LD S + + ++ A RY+LL GGK++R L L Sbjct: 15 SYIIRKADSVNKALD-------SAVPLREPLKIHEAXRYSLLAGGKRVRPVLCIAACELV 67 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A A+E IH SLIHDDLP DN +RRGKPT H Y E A++AG+ LL+ Sbjct: 68 GGEESLAXPAACAVEXIHTXSLIHDDLPCXDNDDLRRGKPTNHKVYGEDVAVLAGDALLS 127 Query: 126 YAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ETQVFM 179 +AFE ++S +++ + + L IG +G++ GQ++DI E +D + Sbjct: 128 FAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKF 187 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KT AL+ + G I+ S E ERLR F +G++FQ+ DD+LD Sbjct: 188 IHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVT 239 >gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus WK1] gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus WK1] Length = 290 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 86/231 (37%), Positives = 133/231 (57%), Gaps = 10/231 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L++ ++I+ L + Q + A+ Y+L GGK+IR L+ F Sbjct: 5 LRQYKEQIEQQLPAYIESL------QAPQTIKEAMLYSLQAGGKRIRPLLLLSTLHAFRK 58 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + V A+E IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+ LLTYA Sbjct: 59 PIDIGMSVACALEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYA 118 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F++++ KT + +++ +L+ L G +GM+GGQ+ D++ E I Q+ I + KT Sbjct: 119 FQVVADDKT-ISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 G L+ ++ +GAI+ A++ + L F ++LG+ FQ+ DD+LD E D K Sbjct: 178 GKLLQYSIRAGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEGDEQK 228 >gi|295319241|gb|ADF99618.1| geranyltranstransferase [Clostridium botulinum F str. 230613] Length = 290 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 86/236 (36%), Positives = 137/236 (58%), Gaps = 12/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+ Sbjct: 3 KIKKMGEEIELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 A I+ + + ++ G+ GM+GGQ++DI +D+ I +++ +Q+ K Sbjct: 118 AMNIMFEYSLKNGEKALKAC-YTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMQQKK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 GAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK Sbjct: 177 AGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232 >gi|254513451|ref|ZP_05125516.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11] gi|221532455|gb|EEE35451.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11] Length = 301 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 111/242 (45%), Positives = 148/242 (61%), Gaps = 6/242 (2%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L + + + RI+T LD LL + + RLL+A+R+ L GGK++R LV Sbjct: 1 MTPDLKTHMAVQAIRIETRLDHLLGGSEFLESNKSPPRLLAAMRHGVLNGGKRLRPVLVL 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 ECA+L L V A+E IHCYSL+HDDLP+MDN +RRGKPTVH +DE T I+A Sbjct: 61 ECAALLGRCDEGVLDVACALELIHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATGILA 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177 G+ LLT AF++I IR QL L+ G+ GM GGQMLD+Q E D E ++ Sbjct: 121 GDALLTLAFDVIGQEAAHPDATIRLQLSRELSKASGVVGMAGGQMLDLQAEHCDRTEIEI 180 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 + MKTGAL+ +AC +GAI+A AS + +RL FG +G+ FQ+ADDLLD E+L Sbjct: 181 YKFHAMKTGALLRYACRAGAILADASNDNIDRLTRFGTTIGLSFQIADDLLDVVASPEEL 240 Query: 235 PK 236 K Sbjct: 241 GK 242 >gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 302 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 10/238 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + + ++E ++ + T L L Q + L A+ Y+L+ GGK++R LV A Sbjct: 7 SIEAYMKEIAEAVSTRLSSSLP-----AAWQVPETLSRAMDYSLMAGGKRLRPLLVVAAA 61 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + A+ V A+E +H YSLIHDDLP++DN RRGKPT H + E AI+AG+G Sbjct: 62 EALGGSRDAAMPVACAVEMVHTYSLIHDDLPALDNDDFRRGKPTNHKVFGEAMAILAGDG 121 Query: 123 LLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178 LLT+AF + +S K + ++ L+ G GM+GGQ+ D+Q E D Q+ Sbjct: 122 LLTHAFYSVVQASRKQGVPAEASLAIVEELSRFAGPGGMVGGQVADMQGEQGVTDLDQLR 181 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTG L+ F+ +G +A + + E L +G LG FQ+ DD+LD D K Sbjct: 182 YIHEHKTGDLIVFSVRAGGHIASGNAEQLEALERYGRALGHAFQIQDDILDLIGDESK 239 >gi|300854301|ref|YP_003779285.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528] gi|300434416|gb|ADK14183.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528] Length = 293 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 86/225 (38%), Positives = 130/225 (57%), Gaps = 6/225 (2%) Query: 16 IDTILDDLLLQTASHMQTQ--HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 I+T+ ++L +M+ + +N R+ A++Y+L GGK+IR L L+ + Sbjct: 7 IETLREELNKYLYDYMEGKGSYNKRVYEAMQYSLDAGGKRIRPLLFLLTYKLYKTDCNEV 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E A++AG+GLL A ++ Sbjct: 67 MDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAVLAGDGLLNEAMSLMF 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 KDN + ++ + G GM+GGQ +DI E I Q++ + KTGAL+ Sbjct: 127 RHCIGKKDNA-IRACSIISESAGADGMVGGQTVDILSENTKIPIDQLYYMHSKKTGALIK 185 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + S A+ A AS+ E ++L +GE LG+ FQ+ DD+LD D Sbjct: 186 GSIISAAVYAGASKAEIDKLSYYGEKLGLAFQIKDDILDLTGDTA 230 >gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1] gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1] Length = 315 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 136/237 (57%), Gaps = 10/237 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + L + ++ L+ LL + + A+RY+LL GGK++R L A Sbjct: 21 DIKQYLAAQRELVEAALEQLLPAEDGPLAAH-----IEAMRYSLLAGGKRVRPILCLAAA 75 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + L V A+ECIH YSLIHDDLP+MDN +RRG PT H ++ E AI+AG+G Sbjct: 76 EAVGSDPKPLLPVAGALECIHTYSLIHDDLPAMDNDDLRRGMPTSHKKFGEAAAILAGDG 135 Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 LL++AFE+++ P + + +L+ ++ +G +GM+GGQ+LDI+ E ++ ++ Sbjct: 136 LLSFAFELLARPLGEHGPGPAAQLRLLATVAAAVGPRGMVGGQVLDIEAEGRRLELDELQ 195 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A ++GAI AS+ + + L +G+ G+ FQ+ DDLL+ D Sbjct: 196 QIHRHKTGALITAAVQAGAIGGGASETQLQALTRYGQQTGLAFQIVDDLLNVTSDTA 252 >gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM 16795] gi|164603021|gb|EDQ96486.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM 16795] Length = 295 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 79/236 (33%), Positives = 130/236 (55%), Gaps = 9/236 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L+ S I+ +L + + + +T + A+ Y+L GGK++R L E A Sbjct: 2 AFKEDLKTKSAYIEDLLKQYMPKEEGYQKT-----IFEAMNYSLSSGGKRLRPILTLESA 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + + AIE IH YSLIHDDLP+MDN RRGKPT H + + A +AG+ Sbjct: 57 KIIGGDVKEVIPFCVAIEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGDGMATLAGDA 116 Query: 123 LLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL YAFEI+ ++ +IR + + + G+ GM+GGQ++DI+ E I++ ++ Sbjct: 117 LLNYAFEIMLKESLGKENADIRLKAIYEIARGAGIYGMIGGQVVDIESENKSIEKEKLDF 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I KT A++ +GAIM +A +++ + + + +N+G+ FQ+ DD+LD D Sbjct: 177 IHMNKTAAMIIGCMRAGAIMGNACEDDLQNITKYAKNIGLAFQIVDDILDIVGDEK 232 >gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea] Length = 367 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 16/243 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L E + +++ LD + ++ + A+RY+LL GGK++R L Sbjct: 72 FDFKAYLIEKANKVNEALDQ-------AVSVKNPPMIHEAMRYSLLAGGKRVRPILCIAA 124 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ-YDEVTAIIAG 120 L ++ A+E IH SLIHDDLP +RRGK + E A++AG Sbjct: 125 CELVGGEESNSVPAACAVEMIHTMSLIHDDLPCYGQRDLRRGKAHETTKSSCEDVAVLAG 184 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQ 176 + LL ++FE I++ + ++ +IG +G++ GQ+ D +++ Q Sbjct: 185 DSLLAFSFEYIATATKNVSPAKNFSRSRRISKSIGTEGLVAGQVADFVINGENQMFGLDQ 244 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I KT AL+ A GAI+ + E E+LR F +G++FQ+ DD+LD E+ Sbjct: 245 LEFIHIHKTAALLEAAVVLGAILGGGNPEEVEKLRRFARCIGLLFQVVDDILDVTKSSEE 304 Query: 234 LPK 236 L K Sbjct: 305 LGK 307 >gi|15224064|ref|NP_179960.1| GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2); farnesyltranstransferase [Arabidopsis thaliana] gi|75218930|sp|O04046|GGPP2_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 2; Short=GGPP synthase 2; Short=GGPS2; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2; AltName: Full=Dimethylallyltranstransferase 2; AltName: Full=Farnesyl diphosphate synthase 2; AltName: Full=Farnesyltranstransferase 2; AltName: Full=Geranyltranstransferase 2; Flags: Precursor gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana] gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana] gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana] Length = 376 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 18/244 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 + ++ ++ L++ + ++ A+RYA L GK++R L Sbjct: 82 TFEFDPYMMSKAESVNKALEEAI-------PVGEPLKIHEAMRYAILAAGKRVRPILCLA 134 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L A+ A+E IH SLI DDLP MDN +RRGKPT H Y E AI++G Sbjct: 135 SCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSG 194 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL+ AFE +++ ++ + L +IG +G++ GQ +DI E +D Sbjct: 195 GALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLE 252 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 + I KT L+ A GAI+ S E E +R F +G++FQ+ DD+LD E Sbjct: 253 HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSE 312 Query: 233 DLPK 236 +L K Sbjct: 313 ELGK 316 >gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp. lyrata] gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp. lyrata] Length = 356 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 77/245 (31%), Positives = 117/245 (47%), Gaps = 17/245 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + SK ++ +LD+ + + ++ A+RY LL GGK++R L Sbjct: 58 SEFMSYMIRKSKSVNEVLDEAVPLCEPVL------KIREAMRYTLLSGGKRVRPMLCLAA 111 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L TA+ A+E IH SLI DDLP MD+ +RRGKPT H + E AI+A + Sbjct: 112 CELVGGQESTAMPCACAVEMIHASSLIQDDLPCMDDDNLRRGKPTNHKVFGENIAILAVD 171 Query: 122 GLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID------E 174 L+ A + + S + +L + +G +G++ GQ D+ E Sbjct: 172 ALIALAIKHTVESTSLDVPPERVLLAILEMARAVGTEGLVAGQAADLDGEGKSFDNDTGL 231 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--- 231 + I KT AL+ A GAIM S E ER+R + +G++FQ+ DD+LD Sbjct: 232 KHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERIRSYARCIGLMFQVVDDVLDVTKSS 291 Query: 232 EDLPK 236 E+L K Sbjct: 292 EELGK 296 >gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 373 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 18/244 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 + ++ ++ L++ + ++ A+RYA L GK++R L Sbjct: 79 TFEFDPYMMSKAESVNKALEEAI-------PVGEPLKIHEAMRYAILAAGKRVRPILCLA 131 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L A+ A+E IH SLI DDLP MDN +RRGKPT H Y E AI++G Sbjct: 132 SCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSG 191 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL+ AFE +++ ++ + L +IG +G++ GQ +DI E +D Sbjct: 192 GALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLE 249 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 + I KT L+ A GAI+ S E E +R F +G++FQ+ DD+LD E Sbjct: 250 HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSE 309 Query: 233 DLPK 236 +L K Sbjct: 310 ELGK 313 >gi|28211243|ref|NP_782187.1| geranylgeranyl pyrophosphate synthase [Clostridium tetani E88] gi|28203683|gb|AAO36124.1| geranyltranstransferase [Clostridium tetani E88] Length = 288 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 10/231 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L +DT L + + +N + A+ Y++ +GGK+IR L ++N Sbjct: 3 LNSYKDEVDTWLKEYFKDKGT-----YNKSVYEAMSYSVNIGGKRIRPILALITYKIYNK 57 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N+ AL + AIE IH YSLIHDDLP MD+ +RRGKPT H + + A++AG+GLL A Sbjct: 58 NYKEALSIACAIEMIHTYSLIHDDLPCMDD-DLRRGKPTNHKVFGDGLAVLAGDGLLNEA 116 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185 F II Q K + + G++GM+GGQ++D ++ I+ ++ I + KT Sbjct: 117 FNIILKNGCQ-KGMTWVEAGYEIGKASGVEGMIGGQVVDVLNTNKSIEIEELDYIHEKKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 AL+ + +GAI+ A++ + L+ FG+ LG+ FQ+ DD+LD E D K Sbjct: 176 AALITASIMTGAILGEANEKDTTILKEFGKKLGLAFQIKDDILDIESDTRK 226 >gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp. lyrata] gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp. lyrata] Length = 372 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 122/244 (50%), Gaps = 18/244 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 N + ++ I+ LD+ + + A+RYA L GGK++R L Sbjct: 78 NFDFKPYMINKAETINRALDEAI-------PLIEPLNIHKAMRYAILAGGKRVRPILCLA 130 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L A++ A+E IH SLI DDLP MDN +RRGKPT H + E AI++G Sbjct: 131 ACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSG 190 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL AFE ++ K +R + L +IG +G++ GQ +D+ E +D Sbjct: 191 GALLALAFEHLTEADVSSKKMVRV--VKELAKSIGTKGLVAGQAMDLSSEGLDPNDVGLE 248 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 + I KTGAL+ + GA++ S+ E E++R F +G++FQ+ DD+LD E Sbjct: 249 DLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRYFARCIGLLFQVVDDILDETKSSE 308 Query: 233 DLPK 236 +L K Sbjct: 309 ELGK 312 >gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1] gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1] Length = 337 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 81/243 (33%), Positives = 132/243 (54%), Gaps = 13/243 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L + + I+ LD+ ++ T ++++ A++Y+L+ GGK+IR L Sbjct: 41 DFDLNQYIADKLPLIEKALDESVVSTEKE-----TEKIVEAMKYSLMAGGKRIRPVLCLA 95 Query: 61 CASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +FN + A+ ++E IH SLIHDDLPSMDN +RRGKPT H+ Y E AI+A Sbjct: 96 ACEMFNDGDSTPAMPAAVSLEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILA 155 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176 G+ LL+ +F ++ + + +++ L ++G +G+ GGQ++D++ E Sbjct: 156 GDALLSDSFRHVAEQTKGVAADRVLDVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLED 215 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EED 233 + I KT L+ A SGAI+ AS E + F N+G+ FQ+ADD+LD E+ Sbjct: 216 LRWIHTHKTATLLQVAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQSTEE 275 Query: 234 LPK 236 L K Sbjct: 276 LGK 278 >gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum HRM2] gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum HRM2] Length = 316 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 83/242 (34%), Positives = 128/242 (52%), Gaps = 16/242 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N + L+ ++ L +L + L A+ ++L+ GGK++R L Sbjct: 15 NFDFKAYLKARQTLVNERLGAILGSLDPRRE------LTCAMGHSLMAGGKRLRPILCLA 68 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + AL A+E IH YSL+HDDLP+MDN +RRG PT H + E TAI+AG Sbjct: 69 ACEACSAPLEPALPAACALEMIHTYSLVHDDLPAMDNDDLRRGIPTCHRAFGESTAILAG 128 Query: 121 NGLLTYAFEIISSPKTQLK----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-- 174 +GLLT+AF+I+S P+ K +R +L+ ++ G+ GM+ GQMLD+ + DE Sbjct: 129 DGLLTHAFQILSRPENLFKVFPDPGVRLELVAIISDAAGINGMVEGQMLDMLLQNADETV 188 Query: 175 ---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + I +KTG ++ + +GA+ A A E L + E +G+ FQ+ DD+LD E Sbjct: 189 TSLELLTQIHTLKTGGMIRASVVAGAVSAGADNAMIESLAVYAEKIGLAFQIVDDILDVE 248 Query: 232 ED 233 D Sbjct: 249 GD 250 >gi|585326|sp|Q08291|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus] Length = 297 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 130/237 (54%), Gaps = 10/237 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L E + ++T L + + + +L A+ Y+L GGK+IR L+ Sbjct: 5 SVEQFLNEQKQAVETALSRYIERL------EGPAKLKKAMAYSLEAGGKRIRPLLLLSTV 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+G Sbjct: 59 RALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDG 118 Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAF++I+ + + ++R +L+ L G +GM+ GQ D++ E + +++ Sbjct: 119 LLTYAFQLITEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTG ++ ++ +GA++ A + L F +LG+ FQ+ DD+LD E K Sbjct: 179 IHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEK 235 >gi|118443490|ref|YP_878055.1| geranyltranstransferase [Clostridium novyi NT] gi|118133946|gb|ABK60990.1| geranyltranstransferase [Clostridium novyi NT] Length = 289 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 83/232 (35%), Positives = 133/232 (57%), Gaps = 14/232 (6%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 + ++ L++ S +N + A++Y++ +GGK+IR L+ +++ N+ Sbjct: 7 KEEVNVWLNNYFENKGS-----YNKIVYDAMKYSVEVGGKRIRPTLMLCTYNVYKDNYKD 61 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 + + AIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLL A I+ Sbjct: 62 IMPMACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIM 121 Query: 132 SSPKTQLKDNIRSQLM-LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 + L ++IR+ ++ G++GM+GGQ++DI E I + + K KTG L Sbjct: 122 FNY--SLNNDIRALKASKIISEASGVEGMIGGQVVDIISEGKKITIDNLKYMHKNKTGKL 179 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + +GAI+ +A + + + L FGE LG+ FQ+ DD+LD D L K+ Sbjct: 180 IKSPIIAGAILGNAPKEDIDILEEFGEKLGLAFQIKDDILDVIGDVKVLGKE 231 >gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs] gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs] Length = 295 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 82/236 (34%), Positives = 129/236 (54%), Gaps = 9/236 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 +LQ + L D +M+ +N L+ +++Y+L GGK++R L Sbjct: 3 FREQLQHYIDLTNEHLKDYF-----NMKEGYNQTLIESMKYSLFAGGKRLRPILSLASYQ 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F + + IE IH YSLIHDDLP+MDN RRGK T H Y+E AI+AG+GL Sbjct: 58 MFRDDIEEVMPYACGIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYNEGVAILAGDGL 117 Query: 124 LTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 L Y+FE++ + D + + ++++ G+ GM+GGQ++D++ E ID+ + I Sbjct: 118 LNYSFELMLENAIKQNDIYKHIVAIKEISNSAGVHGMIGGQVVDLESENKIIDKEMLDYI 177 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT AL+ + + GAI+A A + + + G NLG+ FQ+ DD+LD D K Sbjct: 178 HINKTAALITTSLKVGAIIAGAQEEDIRNMEKVGLNLGLAFQIKDDILDVVGDEAK 233 >gi|284051541|ref|ZP_06381751.1| Polyprenyl synthetase [Arthrospira platensis str. Paraca] Length = 239 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 121/223 (54%), Gaps = 11/223 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L + L + + ++ LD + + + +++ ++RY+L+ GGK++R L Sbjct: 24 FDLSTYLSQKKELVEAALD-------AAITVTYPEKIYESMRYSLMAGGKRLRPTLCLAT 76 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDDLP+MDN RRGK T H Y + AI+AG+ Sbjct: 77 CELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGD 136 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 GLL+YAFE +++ + Q++ L +G G++GGQ++DI E + E + Sbjct: 137 GLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLT 196 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 I KTGAL+ GAI+A A++ + ERL + +N+G+ F Sbjct: 197 FIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAF 239 >gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella henselae str. Houston-1] gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella henselae str. Houston-1] Length = 300 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 106/233 (45%), Positives = 150/233 (64%), Gaps = 3/233 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 + L +++ ++ L LL + + + LL A+RY L GGK++R FLV + Sbjct: 2 HEFITLLAKHAHSVEKRLATLLSDQVQNGEIARPEILLKAMRYGVLNGGKRLRPFLVIQS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +LF++ +L V +A+ECIHCYSLIHDDLP+MDN +RRG+PTVHI +DE TAI+AGN Sbjct: 62 CALFDIPIEYSLNVASALECIHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGN 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179 LLT+AFEII+ ++L R +L+ +L GL GM+GGQMLD++ E + + Sbjct: 122 ALLTFAFEIIAHKTSELSFETRIRLITALAQASGLGGMIGGQMLDLEAEKKPQESKDITT 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q MKT L+ FAC++GAI+ +ASQ E+L FG LG+ FQL DDLLD Sbjct: 182 LQHMKTATLISFACQAGAIIGNASQELTEKLAAFGTYLGLAFQLTDDLLDVTA 234 >gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2] gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2] Length = 296 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 87/236 (36%), Positives = 130/236 (55%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M+ L S + + ++++ L D + + + + ++ Y+L GGK+IR L+ Sbjct: 1 MHQSLSSFSELHKEKLEIHLKDYVHKLNA------PPEVKESMLYSLEAGGKRIRPMLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + F + L AAIE +H YSLIHDDLPSMDN +RRGKPT H + E AI+A Sbjct: 55 ASLAAFGEDTSKGLWTAAAIEMVHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAFAILA 114 Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ LLTY+F+ I+ P + L+ L+ G +GM+GGQ DI+ E + Sbjct: 115 GDALLTYSFQTIAETPDEFASAETKLSLIKELSKASGAEGMVGGQAADIKGEGKQLGLED 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I KTG L+ + SGAI+A+ASQ + L F +LG+ FQ+ DD+LD E Sbjct: 175 LEYIHVHKTGKLLECSVVSGAILANASQETIQALSKFAYHLGLAFQIRDDILDLEG 230 >gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis] Length = 382 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 81/244 (33%), Positives = 127/244 (52%), Gaps = 15/244 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 + + + ++ LD + + +L ++RY+ L GGK++R L Sbjct: 86 VEFDFNKYMHAKAISVNQALDR-------AVPLRFPQKLHESMRYSILSGGKRVRPVLCI 138 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L A+ + AIE IH +L+HDD+P +DN IRRGKPT H + E TA+IA Sbjct: 139 AACELVGGTEELAMPIACAIEMIHVMTLLHDDMPCLDNDDIRRGKPTNHKVFGEGTALIA 198 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDET 175 G LL+ AFE I+ ++ N R +++ L G QG++GGQ LD+ E ++ Sbjct: 199 GVALLSVAFEHIAVSTSKTVGNDRILRMVSELGRTTGSQGIMGGQFLDLVSEGDASVNLQ 258 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 + I KT L+ + GAI+ AS++E ER+R + +GI+FQ+ DD+LD E Sbjct: 259 TLQWIHAHKTAVLLESSVVCGAIIGGASEDEIERIRRYASCVGILFQVVDDILDVTKSSE 318 Query: 233 DLPK 236 +L K Sbjct: 319 ELGK 322 >gi|302872147|ref|YP_003840783.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 299 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 15/240 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + + K ++ LD +L + + + + A+RY++ GGK++R L Sbjct: 6 LEEYINLSQKNVEEHLDKILKE-------KSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQ 58 Query: 64 LFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + + + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E AI+AG Sbjct: 59 MVSKDKEIDRKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTSHVVFGEAIAILAG 118 Query: 121 NGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQ 176 + LL A E+ ++ + + L G++GM+GGQ++DI + D E Sbjct: 119 DALLNLAAEVCLNWILNYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEEL 178 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +F + KT L+ +C GA++A A + L +G+NLG+ FQ+ DD+LD D K Sbjct: 179 LFEMHLKKTSRLIQASCVCGALVAGAEDSVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKK 238 >gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1] Length = 292 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 87/234 (37%), Positives = 130/234 (55%), Gaps = 9/234 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S +Q I+ L+++ + N L A+ Y+L+ GGK++R L+ A Sbjct: 2 MKSYMQRKMDLINQQLNEIYTEN-----MALNKDLAKAMNYSLMAGGKRLRPILIMAAAD 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 V+ LR+ +IE IH YSLIHDDLP+MDN RRGK T H + E AI+AG+ L Sbjct: 57 ALGVDGEKFLRLSTSIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT AFEII++ K + + +++ ++ G +GM+GGQ++D+Q E ID + + Sbjct: 117 LTMAFEIIATDKN-VDAETKIKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL C A SGAI+A A + + L + G+ FQ+ DD+LD D Sbjct: 176 AAKTGALFCAAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDILDVVGDEK 229 >gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana] Length = 373 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 18/244 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 + + ++ I+ LD+ + + A+RYA L GGK++R L Sbjct: 78 SFDFKPYMISKAETINRALDEAI-------PLIEPLNIHKAMRYAILAGGKRVRPILCLA 130 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L A++ A+E IH SLI DDLP MDN +RRGKPT H + E AI++G Sbjct: 131 ACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSG 190 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----T 175 LL AFE ++ K +R+ + L +IG +G++ GQ D+ E +++ Sbjct: 191 GALLALAFEHLTEADVSSKKMVRA--VKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLE 248 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 + I KTG+L+ + GA++ ++ E E++R F +G++FQ+ DD+LD E Sbjct: 249 DLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSE 308 Query: 233 DLPK 236 +L K Sbjct: 309 ELGK 312 >gi|168186200|ref|ZP_02620835.1| geranyltranstransferase [Clostridium botulinum C str. Eklund] gi|169295787|gb|EDS77920.1| geranyltranstransferase [Clostridium botulinum C str. Eklund] Length = 289 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 84/233 (36%), Positives = 131/233 (56%), Gaps = 16/233 (6%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 + I+ L++ + ++N + A++Y++ +GGK+IR L+ S++ N+ Sbjct: 7 KEEINVWLNNYFEN-----KGRYNKMVYDAMKYSVEVGGKRIRPILMLCTYSVYKDNYKE 61 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 + + AIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLL A I+ Sbjct: 62 IMPMACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIM 121 Query: 132 S--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187 S +K S+++ + G++GM+GGQ++DI E I + + K KTG Sbjct: 122 FNYSLNNDIKALKASKII---SEAAGVEGMIGGQVVDIISEGKKISIDNLRYMHKNKTGK 178 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 L+ + +GAI+ A + L FGE LG+ FQ+ DD+LD D L K+ Sbjct: 179 LIKSSIIAGAILGDAPNEDVNILDEFGEKLGLAFQIKDDILDVIGDEKILGKE 231 >gi|15224199|ref|NP_179454.1| GGPS4 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4); farnesyltranstransferase [Arabidopsis thaliana] gi|75266042|sp|Q9SLG2|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 4; AltName: Full=Dimethylallyltranstransferase 4; AltName: Full=Farnesyl diphosphate synthase 4; AltName: Full=Farnesyltranstransferase 4; AltName: Full=Geranyltranstransferase 4; Flags: Precursor gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP synthetase/farnesyltranstransferase [Arabidopsis thaliana] gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana] Length = 372 Score = 237 bits (606), Expect = 9e-61, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 18/244 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 + + ++ I+ LD+ + + A+RYA L GGK++R L Sbjct: 78 SFDFKPYMISKAETINRALDEAI-------PLIEPLNIHKAMRYAILAGGKRVRPILCLA 130 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L A++ A+E IH SLI DDLP MDN +RRGKPT H + E AI++G Sbjct: 131 ACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSG 190 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----T 175 LL AFE ++ K +R+ + L +IG +G++ GQ D+ E +++ Sbjct: 191 GALLALAFEHLTEADVSSKKMVRA--VKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLE 248 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 + I KTG+L+ + GA++ ++ E E++R F +G++FQ+ DD+LD E Sbjct: 249 DLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSE 308 Query: 233 DLPK 236 +L K Sbjct: 309 ELGK 312 >gi|312877544|ref|ZP_07737504.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311795685|gb|EFR12054.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 299 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 19/242 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + + K+++ L+ +L + + + + A+RY++ GGK++R L Sbjct: 6 LEEYINLSQKKVEEHLEKILAE-------RSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQ 58 Query: 64 LFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + + + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E AI+AG Sbjct: 59 MLSKDQEVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAG 118 Query: 121 NGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---E 174 + LL A E+ + K+ +++ L + G++GM+GGQ++DI + D E Sbjct: 119 DALLNLAAEVCMDWILRCGCEKNLVKAAKYLFWS--SGVEGMIGGQVIDITNSGQDIKSE 176 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 +F + KT L+ +C GA++A A + + FG+NLG+ FQ+ DD+LD D Sbjct: 177 ELLFEMHLKKTSRLIQASCVCGALVAGAENDVVSDMEEFGKNLGLAFQIRDDILDVIGDS 236 Query: 235 PK 236 K Sbjct: 237 KK 238 >gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF] gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF] Length = 295 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 86/235 (36%), Positives = 131/235 (55%), Gaps = 9/235 (3%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64 + ++E D L L ++ N ++ A+RY++ GGK++R + +L Sbjct: 4 KAIMKEYQILTDKKLHHYL-----DVKEDKNKTVIDAMRYSIFAGGKRLRPIVAIATYNL 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F N L A+E IH YSLIHDDLP+MD+ RRGK T H Y E AI+AG+ LL Sbjct: 59 FKDNLEEVLPYACALEMIHTYSLIHDDLPAMDDDNYRRGKLTNHKVYGEGIAILAGDALL 118 Query: 125 TYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 YAFEI+ S +TQ N+ Q + + G+ GM+GGQ++D++ E +D+ + I Sbjct: 119 NYAFEIMISHARTQSNANVHLQAIEEIAKAAGMNGMIGGQVVDLESENKQVDKNTLNYIH 178 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT AL+ A + GAI+A A++ + + G+N+G+ FQ+ DD+LD D K Sbjct: 179 YNKTAALIISAFKVGAIIAEATETDIAHMNSLGKNIGLAFQIQDDILDIIGDEKK 233 >gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 299 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 81/241 (33%), Positives = 128/241 (53%), Gaps = 15/241 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + + K+I+ L+ +L + + + + A+RY++ GGK++R L Sbjct: 5 ELEEYINLSQKKIEEHLEKILKE-------RSPEIIYQAMRYSVFAGGKRLRPLLCLLSY 57 Query: 63 SLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E AI+A Sbjct: 58 QMLSKDQEINQKVLDIASAIELIHTYSLIHDDLPAMDNDILRRGKPTNHVVFGEAIAILA 117 Query: 120 GNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ET 175 G+ LL A E+ + D + L G++GM+GGQ++DI + D E Sbjct: 118 GDALLNLAAEVCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEE 177 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +F + KT L+ +C GA++A A + L +G+NLG+ FQ+ DD+LD D Sbjct: 178 LLFEMHLKKTSRLIQASCVCGALVAGAEDDVVFDLEEYGKNLGLAFQIRDDVLDVIGDSK 237 Query: 236 K 236 K Sbjct: 238 K 238 >gi|253682719|ref|ZP_04863516.1| geranyltranstransferase [Clostridium botulinum D str. 1873] gi|253562431|gb|EES91883.1| geranyltranstransferase [Clostridium botulinum D str. 1873] Length = 287 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 86/229 (37%), Positives = 127/229 (55%), Gaps = 12/229 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 I+ L+D S +N L +++Y++ +GGK+IR L+ S++ N+ + Sbjct: 7 EINKWLNDYFENKGS-----YNKILYDSMKYSIEVGGKRIRPILMLSTYSIYKNNYKDIM 61 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + AIE IH YSLIHDDLP MDN +RRGKPT H + E AI+AG+GLL A I+ + Sbjct: 62 PMACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNIMFN 121 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 D + ++ G +GM+GGQ++DI E I ++ + K KTG L+ Sbjct: 122 YSLT-HDKLALMASKVISEASGAEGMIGGQVVDIISEGQEISPDKLKYMHKNKTGQLIKS 180 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + +GAI+ AS+ E E L FG LG+ FQ+ DD+LD D L K+ Sbjct: 181 SIIAGAILGGASKEEIEILDEFGSKLGLAFQIKDDILDVIGDSKILGKE 229 >gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C] gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 295 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 80/229 (34%), Positives = 120/229 (52%), Gaps = 10/229 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L ++ ID LD L Q +++ + A+RY++ GGK++R L A Sbjct: 6 LAAKAETIDAALDRYLRQA-----SENPPVIHEAMRYSVFAGGKRLRPALTLAAAQAVGA 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L AIE IH YSLIHDDLP+MDN +RRGKPT H + E A++AG+ L A Sbjct: 61 PERLVLPAACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVFGEAVALLAGSALFALA 120 Query: 128 FEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKM 183 FE+++ + L ++ + G G++GGQ LD+ + E ++ + + Sbjct: 121 FEVLAGCRRDGGLAAERILAVVEEVAAACGTAGLIGGQALDVVSVSRTVSEAELEAVHRA 180 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTGAL A +GA++ AS + ERL F E+ G+ FQ+ DD+LD Sbjct: 181 KTGALFRAAVRAGAVLGGASPVQLERLTVFAEHFGLAFQITDDILDVTG 229 >gi|49474704|ref|YP_032746.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella quintana str. Toulouse] gi|49240208|emb|CAF26676.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella quintana str. Toulouse] Length = 301 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 104/233 (44%), Positives = 151/233 (64%), Gaps = 4/233 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 + L +++ ++ LD LL + + + L+ A+RY L GGK++R FLV + Sbjct: 3 EFTTLLAKHAHSVERRLDTLLSDQVQNGEISRPEALIKAMRYGVLNGGKRLRPFLVIQSG 62 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF++ L V +A+EC+HCYSLIHDDLP+MDN +RRG+PTVHI +DE TAI+AGN Sbjct: 63 ALFDIPAEYCLDVASALECVHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNA 122 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFM 179 LLT+AFEII+ + L + +L+ +L + GL GM+GGQMLD++ E + + Sbjct: 123 LLTFAFEIIAHKASTLPFETKIKLITTLAQSAGLGGMIGGQMLDLEAEKKPQDSAISILT 182 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q MKT AL+ FAC++GAI+ +AS+ E+L FG LG+ FQL DDLLD Sbjct: 183 LQHMKTAALISFACQAGAIIGNASKELTEKLAAFGTYLGLAFQLTDDLLDITA 235 >gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps) [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps) [Thermodesulfovibrio yellowstonii DSM 11347] Length = 295 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 82/236 (34%), Positives = 125/236 (52%), Gaps = 11/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L L++ +I+ + L ++ Y+L GGK++R L Sbjct: 1 MNFELKKYLKDKKAKIEEFIKSYFQTF------PTPPILHDSVLYSLTAGGKRLRPILCI 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + AIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+A Sbjct: 55 ASYEACDG-MENIVPYATAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEGIAILA 113 Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQ 176 G+GLLT AF I+S+ + N +++ ++ GL+GM+ GQ D+ E DE Sbjct: 114 GDGLLTEAFTILSNKDYANISSNTLLKVISEISKAAGLRGMVAGQAYDLISEGKEPDERV 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 V I KT A++ + + GAI+A AS+ + + L +G+++G+ FQ+ DD+LD E Sbjct: 174 VEFIHLYKTAAMIKASVKVGAILAEASEEKIKNLEIYGQSIGLAFQIVDDILDIEG 229 >gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii] gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii] Length = 326 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 89/244 (36%), Positives = 131/244 (53%), Gaps = 15/244 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN + L++ +D LD + S L ++RY+L+ GGK++R L Sbjct: 31 MN--IKDYLEQKRLAVDCFLDQV-----SPPTATPPTTLHESMRYSLMAGGKRVRPILTI 83 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + V ++E IH YSLIHDDLPSMDN RRGKPT H Y E AI+A Sbjct: 84 AAAEAIGATPPGLMAVACSLEFIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEAMAILA 143 Query: 120 GNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175 G+ LLT AF++IS P+ + + +++ L + G GM+GGQ+ DIQ E ID Sbjct: 144 GDALLTMAFDLISRPELMKGCEPTRQVRILQELAYGSGNMGMVGGQVFDIQAENQDIDLP 203 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--- 232 + I K KTG L+ A GA+ A A+ + + + + E++G+ FQ+ADD+L+ Sbjct: 204 TLQNIHKHKTGMLIRAAVRMGAMAAGATDRQLDDMTGYAEDIGLAFQIADDVLNVTGTRE 263 Query: 233 DLPK 236 +L K Sbjct: 264 ELGK 267 >gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263] Length = 309 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 86/241 (35%), Positives = 135/241 (56%), Gaps = 12/241 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 ++L + +I+ L D + D ++SA++Y+L GGK++R L+ E Sbjct: 11 TAKFANRLTKKGHQIEAYLTDCFV-----GPFDAPDIIVSAMKYSLFAGGKRVRPILLME 65 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 ++F + A+ AIE IH YSLIHDDLP+MDN +RRG+PT H Y E AI+AG Sbjct: 66 TCAMFGGDERVAIPFACAIEMIHTYSLIHDDLPAMDNDDLRRGEPTNHKVYGENIAILAG 125 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLT---HNIGLQGMLGGQMLD---IQDEFIDE 174 + LL A E ++ R++ + +L+ G+ GM+GGQ D D+ I+E Sbjct: 126 DALLNAAVETAVEGIETMEPAERARGIAALSLLMRAAGVNGMIGGQTGDLLAEDDDAINE 185 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 ++ I KTGAL+ A GA++A AS++E++ LR +G +G+ FQ+ DD+LD E + Sbjct: 186 DKIVYIHAHKTGALLTAAVLIGAVLAGASEDEQQALRNYGSAIGMAFQVVDDILDVESET 245 Query: 235 P 235 Sbjct: 246 A 246 >gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans NG80-2] gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16] gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans NG80-2] gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16] Length = 297 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 127/237 (53%), Gaps = 10/237 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L E + ++ L + Q + L A+ Y+L GGK+IR L+ Sbjct: 5 EIEQFLNEQKQAVEAALSRYIAQL------HGPETLKKAMAYSLEAGGKRIRPLLLLSTI 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 N L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+G Sbjct: 59 QALGQNPSLGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDG 118 Query: 123 LLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179 LLTYAF++I+ ++ ++R QL+ L G +GM+ GQ+ D++ E ++ Sbjct: 119 LLTYAFQLIAEIHDERVPVDVRLQLIAELAKAAGPEGMVAGQVADMEGEGKTLALAELEY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTG ++ ++ +GA++ A + L F +LG+ FQ+ DD+LD E K Sbjct: 179 IHRHKTGKMLQYSVHAGALLGGADARQMRELNEFAAHLGLAFQIRDDILDIEGTEEK 235 >gi|288961625|ref|YP_003451935.1| geranyltranstransferase [Azospirillum sp. B510] gi|288913905|dbj|BAI75391.1| geranyltranstransferase [Azospirillum sp. B510] Length = 300 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 102/234 (43%), Positives = 147/234 (62%), Gaps = 8/234 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L S + E ++ ++ + LL T R+ A+RY L GGK++R FLV + Sbjct: 6 QSDLKSAMAEIAQAVELKIGALLPTTDLP-----EARVFEAMRYGCLNGGKRLRPFLVMQ 60 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 ++LF VN A+R AA+E +H YSL+HDDLP+MD+G +RRG+PT H Q+DE TAI+AG Sbjct: 61 SSALFGVNPDCAIRAAAAVEMVHSYSLVHDDLPAMDDGELRRGRPTCHRQFDEATAILAG 120 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178 +GLLT AFE+++ P T NIR QL+ +L G GM+GGQMLD + E D Sbjct: 121 DGLLTLAFEVLADPATHEDPNIRCQLVTALAKAAGGHGMVGGQMLDLIAEHETFDLGTTT 180 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q++KTG ++ F+CE+G I+ AS ++ LR + +LG+ FQ+ DDLLD E Sbjct: 181 RLQRLKTGEMIAFSCEAGGILGKASPPQRTALRAYAHDLGLAFQIVDDLLDVEG 234 >gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544] gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544] Length = 298 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 83/235 (35%), Positives = 126/235 (53%), Gaps = 5/235 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 GL + L+E K +++ L++ + + RL ++RY+L+ GGK++R L+ A Sbjct: 3 GLNTMLKEIWKERQQLVEKQLVKELEK-EPPLDARLAESMRYSLMAGGKRLRPILLMAAA 61 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L A+E IH YSLIHDDLP+MDN RRGK T H + + A++AG+ Sbjct: 62 DAVGAKGTDYLTTACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGMAVLAGDA 121 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LLT AFE+I + + + ++ G+ GM+GGQ +D++ E I Q+ + Sbjct: 122 LLTLAFEVIGR-QQHTDPATLLRTVQEISTAAGMNGMVGGQAIDLESEGHRISMEQLRKM 180 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL A SGAI+A AS+ + L + E G+ FQ+ DD+LD D Sbjct: 181 HMGKTGALFRAALRSGAILAGASEKQLAALTAYAEGFGLAFQITDDILDVTGDEA 235 >gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5] gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5] Length = 296 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 87/238 (36%), Positives = 128/238 (53%), Gaps = 10/238 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L LQ I+ L++LL + + T + A+ Y++ GGK++R L Sbjct: 1 MNS-LEQSLQHAIPLINQRLEELLSPSDEPLLT----TIHEAMLYSVRAGGKRLRPLLCL 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + L + AIE IH YSLIHDDLP++DN +RRGKPT H Y E AI+A Sbjct: 56 LTAGALRQDESRVLDIACAIEMIHTYSLIHDDLPALDNDDLRRGKPTNHRVYGEAMAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LL AFE++ L ++ +++ + + G GM+GGQ++DIQ E ID + Sbjct: 116 GDALLNRAFEVLCQL--PLAPDLVIRVIAEIASSSGTAGMIGGQVVDIQSEGKSIDMPTM 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTG ++ S AI A+ + E +G N+G+ FQ+ADD+LD E D Sbjct: 174 RYIHENKTGRIIRSCLVSSAIACQATAEQIELFDRYGYNIGLAFQIADDILDIEGDEA 231 >gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 299 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 80/243 (32%), Positives = 131/243 (53%), Gaps = 19/243 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + + K+++ L+ +L + + + + A+RY++ GGK++R L Sbjct: 5 ELEEYINLSQKKVEEHLEKILKE-------RSPEIIYQAMRYSVFAGGKRLRPLLCLLSY 57 Query: 63 SLFNVN---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E AI+A Sbjct: 58 QMVSKDQIVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILA 117 Query: 120 GNGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--- 173 G+ LL A E+ + ++ I++ L G++GM+GGQ++DI + D Sbjct: 118 GDALLNLAAEVCMDWILRYGCRENLIKAAKYLFWA--SGVEGMIGGQVIDITNSGQDIKS 175 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 E +F + KT L+ +C GA++A A + L +G+NLG+ FQ+ DD+LD D Sbjct: 176 EELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGD 235 Query: 234 LPK 236 K Sbjct: 236 SKK 238 >gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana CCMP1335] gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana CCMP1335] Length = 339 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 125/242 (51%), Gaps = 12/242 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L L I++ L + + + D++ ++ Y+L+ GGK+IR L Sbjct: 44 SFSLDEYLASKIGPIESAL-----EASVKSRIPQTDKICESMAYSLMAGGKRIRPVLCIA 98 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F + A+ A+E IH SLIHDDLPSMDN +RRGKPT H+ + E AI+AG Sbjct: 99 ACEMFGGSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHVVFGEDVAILAG 158 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177 + LL+ +FE ++ + ++ L ++G +G+ GGQ++D++ E + Sbjct: 159 DSLLSTSFEHVARETKGVSAEKIVDVIARLGKSVGAEGLAGGQVMDLECEAKPGTTLDDL 218 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 I KT L+ A SGA++ A+ E F N+G+ FQ+ADD+LD EDL Sbjct: 219 KWIHIHKTATLLQVAVASGAVLGGATPEEVAACELFAMNIGLAFQVADDILDVTASSEDL 278 Query: 235 PK 236 K Sbjct: 279 GK 280 >gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 378 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 74/244 (30%), Positives = 115/244 (47%), Gaps = 18/244 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 + ++ ++ L++ + ++ A+RYA L GK++R L Sbjct: 84 TFEFDPYMMSKAESVNKALEEAI-------PVGEPLKIHEAMRYAILAAGKRVRPILCLA 136 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A+E IH SLI DDLP MDN +RRGKPT Y E AI++G Sbjct: 137 SCELVGGQENATIPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTDKVYGEGVAILSG 196 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL+ AFE +++ ++ + L +IG +G++ GQ +DI E +D Sbjct: 197 GALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLE 254 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 + I KT L+ A GAI+ S E E +R F +G++FQ+ DD+LD E Sbjct: 255 HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSE 314 Query: 233 DLPK 236 +L K Sbjct: 315 ELGK 318 >gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275] gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275] Length = 295 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 72/237 (30%), Positives = 124/237 (52%), Gaps = 9/237 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 +L+ + + I+ + + + +T ++ A+ Y+L GGK++R L E Sbjct: 2 DFKEELKIRANYAEEIIKKYMPEEVGYQKT-----IMEAMNYSLSSGGKRLRPVLTLEAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + A+ AAIE IH YSLIHDDLP++DN +RRG+ T H + E AI+AG+ Sbjct: 57 RIVGGDTDNAIPFAAAIEMIHTYSLIHDDLPALDNDDLRRGRATNHKVFGEAMAILAGDA 116 Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL +A+E ++ + + + G+ GM+GGQ++D+Q E I + ++ Sbjct: 117 LLNFAYETMLKESIGKENPERYLRATYEIAKGAGIYGMVGGQVVDVQSENMQIPKEKLDY 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KT A+M +GA + A + + E + + +G+ FQ+ DD+LD D K Sbjct: 177 IHENKTAAMMVGCMRAGAAIGGADEKQMELITDYANKIGLAFQIVDDILDIVGDEAK 233 >gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 299 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 131/242 (54%), Gaps = 19/242 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + + K+++ L+ +L + + + + A+RY++ GGK++R L Sbjct: 6 LEEYINLSQKKVEEHLEKILAE-------RSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQ 58 Query: 64 LFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + + + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E AI+AG Sbjct: 59 MLSKDQEVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAG 118 Query: 121 NGLLTYAFEIISSPKTQ---LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---E 174 + LL A E+ + K+ +++ L G++GM+GGQ++DI + D E Sbjct: 119 DALLNLAAEVCMDWILRYGCEKNLVKAAKYLFWA--SGVEGMIGGQVIDITNSGQDIKSE 176 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 +F + KT L+ +C GA++A A + + FG+NLG+ FQ+ DD+LD D Sbjct: 177 ELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVYDMEEFGKNLGLAFQIRDDILDVIGDS 236 Query: 235 PK 236 K Sbjct: 237 KK 238 >gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila UWE25] gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia amoebophila UWE25] Length = 294 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 91/236 (38%), Positives = 134/236 (56%), Gaps = 9/236 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + + LQ S+ I+ LD L+ + + L+ A RYALL GGK++R L Sbjct: 3 DVANYLQTQSQLIEKRLDQLVSKRHGP-----HQNLIEAARYALLSGGKRLRPILALTTV 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + AL +E IH YSLIHDDLP MDN RRGK TVH QY E A++ G+ Sbjct: 58 QTLHGDIQEALSPACTLELIHTYSLIHDDLPCMDNDDYRRGKLTVHRQYSEGHAVLTGDF 117 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LLTYAFE++++ K L + +L+ L+ G GM+GGQ LD+ E I+ + ++ Sbjct: 118 LLTYAFELLATDK-YLTSEKKVKLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLL 176 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KT AL+ + E G I+A+A++ + +R FGEN+G+ FQ+ DD+LD K Sbjct: 177 HRNKTAALITASVEFGGILANATEEQLAHIREFGENIGLAFQITDDILDITSSEAK 232 >gi|310829047|ref|YP_003961404.1| Polyprenyl synthetase [Eubacterium limosum KIST612] gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612] Length = 297 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 89/236 (37%), Positives = 126/236 (53%), Gaps = 10/236 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L E K D +LL T D ++SA++Y+L GGK++R L+ E Sbjct: 4 FKETLLEKVKETDH---ELLACFDRKFDT--PDIIVSAMKYSLFAGGKRLRPILMKETCR 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+ L Sbjct: 59 CLGGDSADVKPLACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGENMAILAGDAL 118 Query: 124 LTYAFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L YA E I P K ++ + L H+ G+ GM+GGQ DI ++E I+E +++ Sbjct: 119 LNYAMETAIAGIPVDPSKTFHYTRALSYLAHSSGVNGMIGGQTGDILSENEAINEEKMYY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I KTGAL+ A G +A + E++ L + E +G+ FQ+ DD+LD D Sbjct: 179 IHAHKTGALLKAAVLCGGFVAKVTGEERDALETYSEKIGLAFQIVDDILDVTGDEK 234 >gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured Desulfobacterium sp.] Length = 316 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 86/237 (36%), Positives = 134/237 (56%), Gaps = 11/237 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60 + L S E +K I L +++ ++ S +L A+ Y+L+ GK+IR L Sbjct: 21 DFDLESYFAEKTKTIKNELINIINKSNSF------GQLSKAMEYSLISEGKRIRPILCIA 74 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A L AIE IH YSLIHDDLP++DN +RRGKPT H ++E TAI+AG Sbjct: 75 AAESVGGKQSDVLPAACAIEIIHTYSLIHDDLPAIDNDLLRRGKPTCHAAFNEATAILAG 134 Query: 121 NGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQ 176 + LLT AF+++S + N +++ ++ G GM+ GQM DI E + Sbjct: 135 DALLTLAFQVLSEFELHNNTNALKWLKIINLISTAAGYMGMIEGQMRDIASENTQILLNK 194 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + +KTGAL+ + ESGAI+A+AS ++ ++L+ + + +G+ FQ+ADDLL+ D Sbjct: 195 LEELHILKTGALIVASVESGAILANASLDQIKQLKIYAKKIGLAFQIADDLLNAMGD 251 >gi|310658649|ref|YP_003936370.1| geranyltranstransferase [Clostridium sticklandii DSM 519] gi|308825427|emb|CBH21465.1| geranyltranstransferase [Clostridium sticklandii] Length = 295 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 83/243 (34%), Positives = 135/243 (55%), Gaps = 13/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN ++ + + ++ +D+LL + + +L+ +++Y++ GGK++R L Sbjct: 1 MN--FKELMEFDKQIVEKYMDELL-----SINVIYEKKLIESMKYSVQAGGKRLRPILFL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E L N N + + AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E TAI+A Sbjct: 54 ETIKLLNKNPFDFIEIACAIEMIHTYSLIHDDLPAMDNDSLRRGKPTNHVVFGEATAILA 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+GLL A EI+ + ++ + ++ G+ GM+ GQ +DI+ E ID + Sbjct: 114 GDGLLNLAHEIMIAFVSKKLTKNNINGINIISKAAGINGMIAGQAVDIESEGKSIDIDTM 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234 I KTGAL+ + + A+M+ A L+ + + +G+ FQ+ DD+LD E +L Sbjct: 174 KFIHSNKTGALIEASIVAAAVMSDADDTRIAALKTYAKYIGLAFQITDDILDIEGNEAEL 233 Query: 235 PKK 237 KK Sbjct: 234 GKK 236 >gi|298528183|ref|ZP_07015587.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298511835|gb|EFI35737.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 298 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 15/242 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN +L +K I+ L+ L L A+ Y+L+ GGK++R L Sbjct: 1 MNREFKQELASRAKEIEDYLESCLQFE------GVPGELQQAMEYSLMAGGKRVRPVLCL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + L + +E IH YSL+HDDLP+MDN +RRGKPT H ++ E AI+A Sbjct: 55 AWGEMTGACTKDILPFASGLEMIHTYSLVHDDLPAMDNDDLRRGKPTSHKKFGEALAILA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQ 176 G+GLLT AF ++ KT ++ G GM+GGQ +D++ E ++ Sbjct: 115 GDGLLTQAFAMM--LKTSFPAENVLAAAGTVAQAAGPAGMVGGQCIDMRATGRESMELVD 172 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQN---EKERLRCFGENLGIIFQLADDLLDCEED 233 + + MKTGAL+ AC SGAI+A + + +G N+G+ FQ+ DD+LD D Sbjct: 173 LKGMHAMKTGALLRAACCSGAILAGSDPENGRDTLNAYNYGSNIGLAFQIVDDILDVTGD 232 Query: 234 LP 235 Sbjct: 233 EK 234 >gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM 8271] gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM 8271] Length = 289 Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 8/227 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 Q +++D L + + + ND L ++ Y L+ GGK++R L A + Sbjct: 2 FQNKYSYFTGLIEDFLQK----LPWKANDVLSESMAYTLMAGGKRVRPVLALAAAEIVGG 57 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + +E IH YSLIHDDLP++DN RRG+PT H + E TA++AG+GLLTY Sbjct: 58 APEVVIPCACGLEMIHTYSLIHDDLPALDNDDYRRGRPTNHKVFGEATALLAGDGLLTYG 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F++++S + + +++ +G QGM+ GQ+LD E + +Q+ I +KT Sbjct: 118 FQLLAS-DVPVPLERQIKVIRETAEAVGWQGMVRGQVLDTLGEKGELSVSQITNIHHLKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 GAL+ + GAI+ + E +L + LG+ FQ+ DD+LD E Sbjct: 177 GALLTASVRLGAILGGGLEEEIRQLSIYAAALGLAFQIKDDILDIEG 223 >gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701] gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701] Length = 300 Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 127/235 (54%), Gaps = 4/235 (1%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M + ++ + + +++ + L + + + + L A+RY+LL GGK++R L Sbjct: 1 MAVAVSTEF-DFAAYLESARGQVELALEAALGPERPESLREAMRYSLLAGGKRLRPILCL 59 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L AL A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+A Sbjct: 60 AACELAGGEVALALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAQAILA 119 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLT AFE+++ + Q++ L+ G G++GGQ++D++ E +D + Sbjct: 120 GDALLTRAFEMVALRSPGVPAERLLQVVGELSLAAGAPGLVGGQVVDLESEGKDVDLATL 179 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ +GA++A A + + LR + +G+ FQ+ DD+LD Sbjct: 180 EYIHLHKTGALLQACVLTGAMIAGAPEPLLQGLRTYSRGIGLAFQIIDDILDVTA 234 >gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678] gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678] Length = 294 Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 86/236 (36%), Positives = 129/236 (54%), Gaps = 9/236 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 S+L++ S I+ + L ++ + L SA+ Y+ GGK++R L+ E Sbjct: 2 DFISELKKKSDFIEAEIYAYLP-----LEEGYQKTLFSAMNYSYKAGGKRLRPILIMESY 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L L AAIE IH YSLIHDDLP++DN +RRGK T H + E AI+AG+G Sbjct: 57 KLCGGKGSEYLPYAAAIEMIHTYSLIHDDLPALDNDDLRRGKKTNHKVFGEAMAILAGDG 116 Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LL YA+E+I + D + + ++ G+ GM+GGQ++D++ E ID + Sbjct: 117 LLNYAYEVILNHALNSSDQPSAIKACKAIADGAGIYGMVGGQVVDVESESKEIDLACLDF 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I KT A++ +SGA +A A + E+L +G LG+ FQ+ADD+LD E D Sbjct: 177 IHLNKTAAMIVACMKSGAYLAGADDDTVEKLEAYGRYLGLAFQIADDILDIEGDEK 232 >gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium thermophilum] Length = 292 Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 84/228 (36%), Positives = 131/228 (57%), Gaps = 9/228 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + E ++ LD L+ T R+ A+RY+L+ GGK++R LV Sbjct: 2 IEAYFAEKVPEVNRWLDRLMPPA-----TTFPPRIHEAMRYSLMAGGKRLRPILVLAAGE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F V A E +H YSLIHDDLP+MDN +RRG PT H Q+DE TAI+AG+GL Sbjct: 57 AFGGAPERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 +T+AF I++ + +R L++ ++GM+ GQ++D++ E ID ++ I Sbjct: 117 MTHAFRILAEMDAPAEQKVRVIRELAVGSGT-VEGMIAGQIVDLEAERKPIDAERLKFIH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + KTGAL+ A G I+A A++++ L +G+ +G+ FQ+ADD+LD Sbjct: 176 RAKTGALIRGAVVCGGIVAGATESDLALLAAYGDRVGLAFQIADDILD 223 >gi|293376580|ref|ZP_06622808.1| geranyltranstransferase [Turicibacter sanguinis PC909] gi|325839379|ref|ZP_08166818.1| geranyltranstransferase [Turicibacter sp. HGF1] gi|292644806|gb|EFF62888.1| geranyltranstransferase [Turicibacter sanguinis PC909] gi|325490499|gb|EGC92815.1| geranyltranstransferase [Turicibacter sp. HGF1] Length = 291 Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 89/231 (38%), Positives = 135/231 (58%), Gaps = 10/231 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + ++ N K + ++ DL+ L ++ Y+L +GGK++R L+ Sbjct: 2 LSTYIETNKKPFEKVMFDLIESE------PIPSELKESMLYSLKVGGKRLRPILLFAVLE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 FN+ V AA+E IH YSLIHDDLP+MD+ +RRGKPT HI + E TAI+AG+ L Sbjct: 56 SFNLAPQKGYHVAAALEMIHTYSLIHDDLPAMDDDALRRGKPTNHIVFGEATAILAGDSL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 LT+AF++I+ + +L N R L+ +L+ G GM+ GQ+LD++ E + Q+ I Sbjct: 116 LTHAFKVIAEDE-RLTTNQRLSLIQALSLASGPMGMVAGQVLDMEAEVKAVSLEQLKQIH 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTG L+ FA +GAI+A A +L+ F +LG+ FQ+ DD+LD E Sbjct: 175 VNKTGRLIEFAIVAGAIIAQADDEVINQLKQFAYHLGLAFQIKDDILDVEG 225 >gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 299 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 15/240 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + + K+++ L+ +L + + + + A+RY++ GGK++R L Sbjct: 6 LEEYIYLSQKKVEENLEKILKE-------RSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQ 58 Query: 64 LFNVN---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + + + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E AI+AG Sbjct: 59 MVSKDQIVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAG 118 Query: 121 NGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQ 176 + LL A E+ + D + L G++GM+GGQ++DI + D E Sbjct: 119 DALLNLAAEVCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEEL 178 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +F + KT L+ +C GA++A A + L +G+NLG+ FQ+ DD+LD D K Sbjct: 179 LFEMHLKKTSRLIQASCVCGALVAAAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKK 238 >gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L] gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L] Length = 295 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 82/241 (34%), Positives = 135/241 (56%), Gaps = 12/241 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 +L+E S I+ ++ L + + +T + A+ Y+L GGK++R L+ E Sbjct: 2 DFKKELKERSIYIEDKIESYLPKEEGYQKT-----IFEAMNYSLRAGGKRLRPILLMEAY 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + A+E IH YSLIHDDLP++DN +RRGKPT HI + E AI+AG+ Sbjct: 57 KLCQGQGEDFVPYSVAMEMIHTYSLIHDDLPALDNDDLRRGKPTNHIVFGEAMAILAGDA 116 Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179 LL A+E ++++ + I + ++ G+ GM+GGQ++D++ E ID+ ++ Sbjct: 117 LLNTAYETMLNAAFKHSRPEISLRAAYEISRGAGIYGMIGGQVVDVESEDKKIDKDKLDY 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 I KT A++ + +GAI+A ++ E L + EN+G+ FQ+ DD+LD E D L K Sbjct: 177 IHMNKTAAMIVGSVRAGAILAGIDEDRLESLTKYAENIGLAFQIVDDILDIEGDEKLLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium DG1235] Length = 292 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 86/234 (36%), Positives = 130/234 (55%), Gaps = 10/234 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 KL+ I++ +D L A+ R+ A+ Y++ GGK++R LV Sbjct: 2 EFKEKLRTYQSEIESAVDQYLPAEATR-----PSRIHEAMLYSMRAGGKRLRPVLVLASK 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF+ + L A+ A+EC+H YSLIHDDLPS+D+G +RRGKPT H Q+DE TA++AG+ Sbjct: 57 ELFD-SELDAMPAAIAVECLHTYSLIHDDLPSIDDGDLRRGKPTSHKQFDEATAVLAGDA 115 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LL YAF++++ D + + L+ L G + ++GGQM DI E + E + I Sbjct: 116 LLAYAFQLLARHFANAPD-VCANLVGELGETAGSERLIGGQMEDILGEGGPLSEDTLNFI 174 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 KT AL+ G I+ A+ + + LR +G +GI FQ+ DD+LD D Sbjct: 175 HLNKTSALIECCLVMGGIIGGANYEQIDALRTYGREIGIAFQIIDDILDATSDE 228 >gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM 17244] gi|169259366|gb|EDS73332.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM 17244] Length = 294 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + +L++ ++ +L ++ + + Y+L GGK+IR L+ E Sbjct: 2 DIKKELKDKQSFVEDVLKKYTIKEGK------PKSIFESFNYSLFVGGKRIRPILLMESC 55 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + AL + AA+E IH YSLIHDDLP MD+ +RRGKPT H Y E TA++AG+ Sbjct: 56 KCVGGDTNEALPLMAAMEMIHTYSLIHDDLPCMDDDELRRGKPTNHTVYGEATALLAGDS 115 Query: 123 LLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179 LL A+E + KD N + M + + G++GM+ GQ++D++ E D + Sbjct: 116 LLNLAYETMLKGAKSSKDINRYVEAMNVIADSAGVKGMIAGQVMDMESEGKEPDGETLDF 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 I KTGA++ + SGA++ A+ +E + L + +G++FQ+ DD+LD D L K Sbjct: 176 IHDNKTGAILRASVISGAVVGGATDDELKNLSEYARAIGLMFQVVDDILDVVSDEETLGK 235 Query: 237 K 237 K Sbjct: 236 K 236 >gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa] gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa] Length = 287 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 80/232 (34%), Positives = 124/232 (53%), Gaps = 13/232 (5%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69 + +++ LD+ + QH ++ A+RY+LL GGK++R L L + Sbjct: 3 QKGNQVNKALDE-------AVPLQHPRKIHEAMRYSLLAGGKRVRPILCIASCELVGGDE 55 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A+ A+E IH SLIHDDLP MDN +RRG PT H + E TA++AG+ LL AFE Sbjct: 56 ELAMPTACALEMIHTMSLIHDDLPCMDNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFE 115 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187 ++ + + Q + L +G +G++ GQ++DI+ E + + + I KT Sbjct: 116 HVARNTKNVSSDRVVQALAELGSAVGSKGLVAGQVVDIESEGKEVSLSTLEYIHVHKTAK 175 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 L+ A GAIM A ERLR + ++G++FQ+ DD+LD E+L K Sbjct: 176 LLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDMTKSSEELGK 227 >gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16] gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16] Length = 293 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 89/233 (38%), Positives = 129/233 (55%), Gaps = 14/233 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 + R++ L + + Q + L A+ Y+L+ GGK+IR LV E + + Sbjct: 11 EAAQARVEEALRERVGQMGRYAD------LREAMEYSLMAGGKRIRPVLVLESCRMCGGD 64 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AL A+E IH YSLIHDDLP+MD+ +RRG+PT H+ Y E TAI+AG+GLLT AF Sbjct: 65 PEVALPFACAVEMIHTYSLIHDDLPAMDDDELRRGRPTNHMVYGEATAILAGDGLLTAAF 124 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTG 186 + ++ QL + L+ G GM+GGQ LD+ E T ++ +Q +KTG Sbjct: 125 QTLTQA--QLTAQQVVDAVACLSLAAGPDGMVGGQALDMAGEGRSLTRAELEQLQSLKTG 182 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 AL+ A E G I A S ++E +R + + LG FQ+ DD+LD E+L K Sbjct: 183 ALIAAAAELGCIAAGGSPEQRESVRQYAQCLGRAFQVQDDILDVTSTDEELGK 235 >gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426] gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus] gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Geobacillus kaustophilus HTA426] Length = 297 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 10/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L E + ++ L + + + + L A+ Y+L GGK+IR L+ Sbjct: 5 SVEQFLNEQKRAVEAALSSYMARL------RGPETLKKAMAYSLEAGGKRIRPLLLLATI 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+ Sbjct: 59 QALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDA 118 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179 LLTYAF++I+ ++ ++R QL+ L G +GM+ GQ D++ E ++ Sbjct: 119 LLTYAFQLIAEVDDDRVPPSVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I + KTG ++ ++ +GA++ A + L F +LG+ FQ+ DD+LD E Sbjct: 179 IHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEG 231 >gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum ATCC 824] gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum ATCC 824] gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum EA 2018] Length = 289 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 77/226 (34%), Positives = 123/226 (54%), Gaps = 9/226 (3%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 K ++ L + +N R+ ++ Y+L GGK++R L+ +++N ++ Sbjct: 7 KKEVEEYLSRYFEGKDN-----YNKRVYESMNYSLNAGGKRVRPLLLLASYAIYNKDYKE 61 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 + + AAIE IH YSLIHDDLP MDN +RRG+PT H + A++AG+GLL A I+ Sbjct: 62 VIDIAAAIEMIHTYSLIHDDLPCMDNDDLRRGRPTNHKIFGYSIALLAGDGLLNEAMNIM 121 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 + ++ ++ GM+GGQ++DI E I+E ++ + K KTG L+ Sbjct: 122 FKYCIGKGEEALKACLM-ISKAASSDGMIGGQVVDILSEGKKINEDELRYMHKKKTGELI 180 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A SGAI+ A ++ E L +G+ LG+ FQ+ DD+LD D Sbjct: 181 KAAVVSGAILGGAPLHDVELLSQYGDKLGLAFQIEDDILDIIGDTK 226 >gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61] gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3] gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52] gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61] gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3] gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52] Length = 297 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 80/233 (34%), Positives = 123/233 (52%), Gaps = 10/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L E + ++ L + + + + L A+ Y+L GGK+IR L+ Sbjct: 5 SVEQFLNEQKRAVEAALSSYMARL------RGPETLKKAMAYSLEAGGKRIRPLLLLATI 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+ Sbjct: 59 QALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDA 118 Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179 LLTYAF++++ + +R QL+ L G +GM+ GQ D++ E ++ Sbjct: 119 LLTYAFQLMAEIDDDRVPPPVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I + KTG ++ ++ +GA++ A + L F +LG+ FQ+ DD+LD E Sbjct: 179 IHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEG 231 >gi|331269445|ref|YP_004395937.1| polyprenyl synthetase [Clostridium botulinum BKT015925] gi|329125995|gb|AEB75940.1| Polyprenyl synthetase [Clostridium botulinum BKT015925] Length = 289 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 84/229 (36%), Positives = 126/229 (55%), Gaps = 12/229 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 I+ L+D S +N L +++Y++ +GGK+IR L+ S++ N+ + Sbjct: 9 EINKWLNDYFENKGS-----YNKVLYDSMKYSIEVGGKRIRPILMLSTYSIYKDNYKDIM 63 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + AIE IH YSLIHDDLP MDN +RRGKPT H + E AI+AG+GLL A ++ + Sbjct: 64 PMACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNVMFN 123 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 D + ++ G +GM+GGQ++DI E I ++ + K KTG L+ Sbjct: 124 YSLT-HDKVALMASKVISEAAGAEGMIGGQVVDIISEGQKISIDKLKYMHKNKTGQLIKS 182 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + +GAI+ AS+ E L FG LG+ FQ+ DD+LD D L K+ Sbjct: 183 SIIAGAILGGASKENLEILDEFGSKLGLAFQIKDDILDVIGDSKVLGKE 231 >gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL] gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL] Length = 299 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 19/242 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + + K+++ LD +L + + + + A+RY++ GGK++R L Sbjct: 6 LEEYINLSQKKVEKHLDGILKE-------RSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQ 58 Query: 64 LFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F+ + L + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E AI+AG Sbjct: 59 MFSEDKEIDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVMFGEAIAILAG 118 Query: 121 NGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---E 174 + LL A E+ + ++ I++ L G++GM+GGQ++DI + D E Sbjct: 119 DALLNLAAEVCMDWILRYGCRENLIKAAKYLFWA--SGVEGMIGGQVIDITNSGQDIKNE 176 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 +F + KT L+ +C GA++A A L +G+NLG+ FQ+ DD+LD D Sbjct: 177 ELLFEMHLKKTSRLIQASCVCGALVAGAEDRVVFDLEEYGKNLGLAFQIRDDVLDVIGDS 236 Query: 235 PK 236 K Sbjct: 237 KK 238 >gi|220927127|ref|YP_002502429.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060] gi|219951734|gb|ACL62126.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060] Length = 337 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 97/237 (40%), Positives = 144/237 (60%), Gaps = 7/237 (2%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61 P++L + ++ L++ L A + RL+ +R+A+LGG K++R FL E Sbjct: 35 ADFPARLTAVADAVEGFLNERLGDAAGPGEITRPVRLMQGMRHAVLGGGKRLRPFLTIET 94 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A + + AL G+ IE +HCYSL+HDDLP+MDN +RRGKPTVH +DE TAI+ G+ Sbjct: 95 ARMLGGPYAGALAAGSGIELVHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATAILVGD 154 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDET 175 LLT+AFEI++ P Q +R++L+L L GL GM+GGQ+LD+ E +D Sbjct: 155 ALLTFAFEILADPVWQPDARVRAELVLGLARAAGLGGMVGGQLLDLGAEGRFGPANLDVD 214 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q MKTGAL+ + ++GAI+ A +++ L +G LG FQ+ADD+LD E Sbjct: 215 ATLQLQAMKTGALLAVSVDAGAIVGGADPDQRAALLAYGRALGQAFQVADDILDREA 271 >gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum] Length = 363 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 125/241 (51%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + E + ++ LD+ ++ + ++ A+RY+LL GGK++R L Sbjct: 70 FNFKVYVAEKAICVNKALDEAIM-------VKDPPKIHEAMRYSLLAGGKRVRPMLCLAA 122 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L N A+ A+E IH SLIHDDLP MD+ +RRGKPT H Y E A++AG+ Sbjct: 123 CELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGD 182 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178 LL +AFE +++ T + + + L ++G +G++ GQ+ D + + + Sbjct: 183 ALLAFAFEYLATATTGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLE 242 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ + GAI+ + E ++LR F + +G++FQ+ DD+LD +L Sbjct: 243 FIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFAQCIGLLFQVVDDILDVTKSSSELG 302 Query: 236 K 236 K Sbjct: 303 K 303 >gi|237747173|ref|ZP_04577653.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS] gi|229378524|gb|EEO28615.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS] Length = 299 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 84/239 (35%), Positives = 125/239 (52%), Gaps = 11/239 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ + LQ I+ L DLL + Q + L A+RYA+L GGK+IR LV Sbjct: 5 MSENFNAWLQSVQSAIEKSLSDLLPS-----EKQFPEPLHQAMRYAVLDGGKRIRPLLVF 59 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +LF + +A+E IH YSLIHDD+P MDN +RRGKPT+H+Q+ E A++A Sbjct: 60 ATGALFGAPVAVMTQTASAVEMIHAYSLIHDDMPCMDNDVLRRGKPTLHVQFGEAMALLA 119 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177 G+ L AF ++S K + ++ + L+ G GM GGQ LD + + Q+ Sbjct: 120 GDALQAQAFIVLSKIDDDAK--LVAERLRILSEASGSLGMCGGQAIDLDSVGKNLSIDQL 177 Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + ++KTGAL+ + GA A E L + + +G+ FQ+ DD+LD D Sbjct: 178 EQMHRLKTGALLKASVMLGAFSAKRPDPEEITALDAYAKAIGLAFQVVDDILDVTADTA 236 >gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila LSv54] gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila LSv54] Length = 298 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 93/246 (37%), Positives = 135/246 (54%), Gaps = 17/246 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN + + L++ ++ +D +L+ + + + + A+RY+L GGK+IR L Sbjct: 1 MN--IKNYLEQKRSLVEEAMDRFMLEESGPFK-----KHIEAMRYSLFAGGKRIRPILCL 53 Query: 60 ECAS---LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 A L V A+ECIH YSLIHDDLP+MD+ +RRGK T H+ Y E A Sbjct: 54 AAADSICAQERTQENLLPVACALECIHTYSLIHDDLPAMDDDQLRRGKATNHVLYGEAGA 113 Query: 117 IIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--ID 173 I+AG+GLL++AF++I+ L R + + G GM+GGQ LDIQ E ID Sbjct: 114 ILAGDGLLSWAFDLIADRGKGNLTAEKRLDICHMVARAAGSLGMVGGQQLDIQSENKEID 173 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230 + I + KTGAL+ + SGAI A A+ + L +G N+G+ FQ+ DDLLD Sbjct: 174 FDTLATIHRSKTGALITCSIMSGAIGAGANAKQLHALEEYGNNIGLAFQIIDDLLDATAT 233 Query: 231 EEDLPK 236 E+L K Sbjct: 234 TEELGK 239 >gi|255524169|ref|ZP_05391129.1| Polyprenyl synthetase [Clostridium carboxidivorans P7] gi|296186627|ref|ZP_06855029.1| putative geranyltranstransferase [Clostridium carboxidivorans P7] gi|255512154|gb|EET88434.1| Polyprenyl synthetase [Clostridium carboxidivorans P7] gi|296048664|gb|EFG88096.1| putative geranyltranstransferase [Clostridium carboxidivorans P7] Length = 293 Score = 231 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 12/228 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 I+ L S +N ++ A+ Y+L GGK+IR L+ L+ + L Sbjct: 14 IENWLGSYFKDKGS-----YNKKVYEAMEYSLGAGGKRIRPLLLLLTYMLYKDDFEKVLP 68 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + +A+E IH YSLIHDDLP MDN +RRGKPT H + E A++AG+GLL I+ Sbjct: 69 IASAVEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAVAVLAGDGLLNEGMSIMLKS 128 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 + N + + + G +GM+GGQ +DI E I Q++ + KTGA++ + Sbjct: 129 CMNEQHNF-IKACSFIAESAGAEGMVGGQTVDILSENTKIPIDQLYYMHSKKTGAIIKAS 187 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 +GAI+ A + + E L +G+ LG+ FQ+ DD+LD D L KK Sbjct: 188 IIAGAILGEAPKRDIENLEYYGQKLGLAFQIKDDILDIVGDTEVLGKK 235 >gi|148258788|ref|YP_001243373.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1] gi|146410961|gb|ABQ39467.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1] Length = 307 Score = 231 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 103/237 (43%), Positives = 144/237 (60%), Gaps = 5/237 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 +L + ++ + +L +LL + RL+ ++RY+ L GGK++R FLV E A Sbjct: 8 DFTQRLDKTAEETEALLGELLGDAPLADEIARPQRLIESMRYSSLGGGKRLRPFLVVESA 67 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ TAI+AG+ Sbjct: 68 AVFGVPRKGALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDA 127 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVF 178 LLT AF+II+ + +R L +L G+ GM GGQ+LD+ E V Sbjct: 128 LLTIAFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDSGPVDVA 187 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q+MKTGAL+ F C +GA++ AS E + L +G LG FQ+ADDLLD E D Sbjct: 188 RVQQMKTGALLRFGCIAGALLGQASPAEYQALDDYGRALGEAFQIADDLLDVEGDAA 244 >gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum] Length = 303 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 89/237 (37%), Positives = 135/237 (56%), Gaps = 9/237 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + + L ++ LD L ++ Q L ++RY+LL GGK+IR L Sbjct: 8 AIEAYLNRCKNAVEQFLDSLFVKE----QRTDYGTLAESMRYSLLAGGKRIRPVLAMAAI 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + + + A +E IH YSLIHDDLPSMDN +RRGKPT H+ Y + TAI+AG+ Sbjct: 64 EALGKDPIPYIPLLAPLELIHTYSLIHDDLPSMDNDSLRRGKPTNHVIYGDATAILAGDA 123 Query: 123 LLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 LLT+AF ++S P + IR +++ L+ G+ GM+GGQ +DI E ++ + + Sbjct: 124 LLTHAFTLLSDPDYDKLVSFEIRLKIIQELSVGAGVNGMVGGQQMDIASEGKALNLSSLE 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + KTGAL+ + GA++ AS + E L +G+ +GI FQ+ADDLLD E D Sbjct: 184 FLHQHKTGALIRASLRIGALLGKASSPDFEHLDRYGQAVGIAFQIADDLLDVEGDAA 240 >gi|294101849|ref|YP_003553707.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261] gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261] Length = 300 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 12/244 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN + +L++N +D L S RL ++ Y+L GGK++R L Sbjct: 2 MNDMVKRELEKNR----VWFEDHLNSLCSSRPENIPPRLWESMTYSLQAGGKRLRPILCV 57 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + A L + A+E +H SLIHDDLP+MDN +RRGKPT H+ Y + AI+A Sbjct: 58 KAAESVGGEKEKVLPMALALEMVHTASLIHDDLPAMDNDSLRRGKPTNHMIYGDALAILA 117 Query: 120 GNGLLTYAFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDET 175 G+ LL +AFE + + + Q + +G G+ GGQ D + Sbjct: 118 GDALLAWAFEYSLKGLMDRGVPPSSIVQALSIFAQAVGPSGICGGQVLDTDPASFTSSLS 177 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 V I KT L+ + +GAI+ ASQ +G +LG+ FQ+ DD+LD E Sbjct: 178 FVANIALQKTAVLLQASLVTGAILGGASQEIAGAFGKYGRHLGLAFQIVDDILDVTSSPE 237 Query: 233 DLPK 236 +L K Sbjct: 238 ELGK 241 >gi|92116242|ref|YP_575971.1| polyprenyl synthetase [Nitrobacter hamburgensis X14] gi|91799136|gb|ABE61511.1| farnesyl-diphosphate synthase [Nitrobacter hamburgensis X14] Length = 308 Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats. Identities = 110/245 (44%), Positives = 150/245 (61%), Gaps = 10/245 (4%) Query: 1 MNGGLPS-----KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIR 54 M GL S +L + +T+L LL + RL+ A+RY+ L GGK++R Sbjct: 1 MTSGLSSADFVKRLDTTADETETLLGTLLSDAVLPDEIARPKRLMDAMRYSSLGGGKRLR 60 Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 FLV E +++F V +AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H D+ Sbjct: 61 PFLVVESSAVFGVPRDSALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTADDA 120 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--- 171 TAI+AG+GLLT AF+II+ + +R L +L G+ GM+GGQMLD+ E Sbjct: 121 TAILAGDGLLTLAFDIITRDEVHQDPAVRLLLTRALARAAGIGGMVGGQMLDLAGEGRFG 180 Query: 172 -IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + V +Q+MKTGAL+ F C SGA++ ASQ + + L +G LG FQ+ADDLLD Sbjct: 181 DREPVDVARLQQMKTGALLRFGCISGALLGQASQKDYQALDAYGRALGEAFQIADDLLDV 240 Query: 231 EEDLP 235 E D Sbjct: 241 EGDAA 245 >gi|306820732|ref|ZP_07454359.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551231|gb|EFM39195.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 295 Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats. Identities = 73/233 (31%), Positives = 129/233 (55%), Gaps = 8/233 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62 + + +Q++ + ++ + ++ ++ ++ +++ ++ Y+LLGG K++R L E Sbjct: 2 DIKTIMQDDKEIVERHIKKIM-----DIKLGYSQKIIESMSYSLLGGGKRLRPVLFIETL 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF+++ L + +E IH YSLIHDDLP+MDN +RRGKPT HI Y E AI+AG+ Sbjct: 57 KLFDIDFEQYLNIACVLEMIHTYSLIHDDLPAMDNDDLRRGKPTNHIVYGEDVAILAGDS 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LL ++E++ + ++ N G+ GM+GGQ+ D+ +E ID + I Sbjct: 117 LLNLSYEVLFDFLYKNSSPNNILACRLISKNAGIFGMIGGQVSDVINENKEIDIENLKYI 176 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT L+ + S A ++ S+ L + N+G+ FQ++DD+LD D Sbjct: 177 HYNKTAKLIMASILSAAYISDCSKEYITYLESYAYNIGMAFQISDDILDVVGD 229 >gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. SG-1] gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. SG-1] Length = 295 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 120/204 (58%), Gaps = 4/204 (1%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 +++ A+ Y+L GGK+IR L+ + L AA+E IH YSLIHDDLPS Sbjct: 31 PEKVKEAMAYSLKAGGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLPS 90 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN +RRGKPT H + E TAI+AG+GLLTY+FE+++ + +L+ L + Sbjct: 91 MDNDDLRRGKPTNHKVFGEATAILAGDGLLTYSFEVLAG-TPDVSAEKLIRLVSLLAKSA 149 Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G +GM+GGQ D++ E + ++ I K KTG L+ F+ + AI+A +++ + L Sbjct: 150 GPEGMVGGQAADMEGESQSLSVEELEYIHKNKTGRLLAFSVMAAAILADSTEEQISLLEE 209 Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236 + ++G+ FQ+ DD+LD E K Sbjct: 210 YAFHIGLAFQIQDDILDVEGSEEK 233 >gi|146337687|ref|YP_001202735.1| putative geranyltranstransferase [Bradyrhizobium sp. ORS278] gi|146190493|emb|CAL74492.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Bradyrhizobium sp. ORS278] Length = 306 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 104/237 (43%), Positives = 145/237 (61%), Gaps = 5/237 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 +L + ++ + +L +LL + RL+ ++RY+ L GGK++R FLV E A Sbjct: 7 DFTQRLDKTAEETEALLGELLSDAPLADEIARPKRLIESMRYSSLGGGKRLRPFLVVESA 66 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ TAI+AG+ Sbjct: 67 AVFGVPRRGALMAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDA 126 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178 LLT AF+II+ + +R L +L G+ GM GGQ+LD+ E D V Sbjct: 127 LLTIAFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDRDPVDVA 186 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q+MKTGAL+ F C +GA++ AS E + L +G LG FQ+ADDLLD E D Sbjct: 187 RVQQMKTGALLRFGCIAGALLGQASAAEYKALDDYGRALGEAFQIADDLLDVEGDAA 243 >gi|312899122|ref|ZP_07758500.1| putative geranyltranstransferase [Megasphaera micronuciformis F0359] gi|310619789|gb|EFQ03371.1| putative geranyltranstransferase [Megasphaera micronuciformis F0359] Length = 293 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 83/232 (35%), Positives = 120/232 (51%), Gaps = 9/232 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L+ KRIDT L +LL + L A+ Y+L GGK+IR L Sbjct: 2 SFRTSLESRKKRIDTRLAELLQTSTPEFSG-----LYEAMNYSLNAGGKRIRPVLFLAVL 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + L + A+EC+H YSLIHDDLP+MDN RRGKPT H Y + TA++AG+G Sbjct: 57 EAAGTDPDAFLDLACALECVHSYSLIHDDLPAMDNDDFRRGKPTNHKVYGDGTAVLAGDG 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LLTYAFE++++ I Q + H G GM+GGQ D+Q E + ++ Sbjct: 117 LLTYAFELMAAQSAAPAHKIL-QAIRIFAHAAGPAGMVGGQYFDLQSEGGVPTRAAMELM 175 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTG + + A++A + L +G+ LG+ FQ+ DD+LD Sbjct: 176 HRSKTGVIFTAIVQMAALLAGVRNETMKALTTYGDQLGLAFQITDDILDVVG 227 >gi|253990912|ref|YP_003042268.1| Geranyltranstransferase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782362|emb|CAQ85526.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP synthase [Photorhabdus asymbiotica] Length = 305 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 87/233 (37%), Positives = 129/233 (55%), Gaps = 10/233 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 +L+ +R++ +L L T N L+ A+++ ALLGGK++R FLV Sbjct: 9 FEQQLKTYQQRVNKVLISTLSSL-----TFPNSPLVRAMQHGALLGGKRLRPFLVYAVGE 63 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F ++ AA+ECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG+ L Sbjct: 64 MFGLSANNLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAGDAL 123 Query: 124 LTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180 AFEI+S + R +++ L G+ GM GGQ LD++ E ID + I Sbjct: 124 QALAFEILSKREMPDVTTANRLEMLAELATASGIAGMCGGQSLDLEAEGKHIDLQALEQI 183 Query: 181 QKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A + GA A S + L + + +G+ FQ+ DD+LD Sbjct: 184 HRHKTGALIRCAVKMGAYGAGQSGHDVLPELDQYAQAIGLAFQVQDDILDVIG 236 >gi|149191099|ref|ZP_01869358.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1] gi|148835027|gb|EDL52005.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1] Length = 294 Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats. Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L S Q N++++D LD RL+ A+RYALL GGK+ R FLV Sbjct: 1 MIEALKSYQQRNNEQLDAWLDHY---------PFQEQRLIEAMRYALLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +F + AAIECIH YSLIHDDLP+MD+ +RRG+ T HIQ+DE TAI+ Sbjct: 52 ATGQIFGCTNEQLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQATCHIQFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176 G+ L T AF I+S + + R ++ L H G GM GQ LD++ E + + Sbjct: 112 GDALQTLAFTILSEGELASFANEQRITMVQKLAHASGAAGMCIGQALDLEAENRNVTLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A + GA+ A +L + + +G+ FQ+ DD+LD D Sbjct: 172 LERIHRHKTGALIKCAVQLGALAAGDKGVQYLPQLENYADAIGLAFQVQDDILDIVGDTE 231 >gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541] gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541] Length = 291 Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 81/238 (34%), Positives = 126/238 (52%), Gaps = 12/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + + I+ L D L +T ++ L A+ Y+L+ GGK++R L+ A Sbjct: 1 MKELWRNRQELIERALRDELAKTDI-----LDNTLREAMEYSLMAGGKRLRPILLMAAAD 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + L A+E IH YSLIHDDLP+MDN RRGK T H Y + AI+AG+ L Sbjct: 56 AVGSDGTKLLPAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGDGIAILAGDAL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT AF ++ + + +++ ++ G +GM+GGQ+LD+Q E I ++ + Sbjct: 116 LTLAFTVLLR-QKDVPAVSLLRVVDEISRAAGAEGMVGGQVLDLQAENKTISLDELRRVH 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KTGAL A SGAI+ AS+ + L + ++ G+ FQ+ DD+LD D+ K Sbjct: 175 MGKTGALFHAALRSGAILGGASEQQLTALTAYADHFGLAFQITDDILDVVGNAEDIGK 232 >gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185] gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185] gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185] gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185] Length = 295 Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 9/238 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ ++ ++ + ++ L L + +++ L A+ Y+L+ GGK++R L+ Sbjct: 1 MHVNFKAEWKKRADLVEEGLLRELKKV-----PAYDETLEKAMEYSLMAGGKRLRPVLLM 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + L G AIE IH YSLIHDDLP+MDN RRGKPT H + + A++A Sbjct: 56 AAADAVGKDGAAFLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLT AFE++ + ++ ++ G GM+GGQ+LD++ E +D + Sbjct: 116 GDALLTLAFEVMLR-QEGAAPETLVTVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAAL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I KTGAL C A SGAI+A A + E L + E G+ FQ+ DD+LD D Sbjct: 175 RKIHMGKTGALFCAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDILDVTGDEA 232 >gi|219854470|ref|YP_002471592.1| hypothetical protein CKR_1127 [Clostridium kluyveri NBRC 12016] gi|219568194|dbj|BAH06178.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 298 Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 131/236 (55%), Gaps = 8/236 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +++ K + LD L + T +N ++ ++ Y+L GGK+IR L ++N Sbjct: 7 EIKRVFKSLKEELDIYLREYMKDRGT-YNRKIYDSMEYSLNAGGKRIRPMLFLLTYRMYN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ + + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+ G+ LL Sbjct: 66 KDYSKVMDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILGGDALLNE 125 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 A I+ +N + ++ + G +GM+GGQ +DI E I +++ + K Sbjct: 126 AMSIMFRHCIGKGENA-IRACSIISESAGAEGMIGGQTVDILSENVKISVDKLYYMHSRK 184 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGA++ + S A+ A + E ++L+C+GE LG+ FQ+ DD+LD D L KK Sbjct: 185 TGAIIKASIVSAAVYASTGEEEIDKLKCYGEKLGLAFQIKDDILDVLGDDAVLGKK 240 >gi|313118274|sp|Q9LRR0|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8, chloroplastic; Short=GGPP synthase 8; Short=GGPS8; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8; AltName: Full=Dimethylallyltranstransferase 8; AltName: Full=Farnesyl diphosphate synthase 8; AltName: Full=Farnesyltranstransferase 8; AltName: Full=Geranyltranstransferase 8; Flags: Precursor Length = 361 Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 81/244 (33%), Positives = 129/244 (52%), Gaps = 16/244 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + ++ ++ LD S + + + A+RY+LL GGK++R L Sbjct: 64 FDFKLYMIRKAESVNAALD------VSIVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 117 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 118 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGD 177 Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL AFE ++ + L + R + ++ L IG +G++ GQ++D+ E ++ Sbjct: 178 ALLALAFEHMTVVSSGLVASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLE 237 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 ++ I KT AL+ A GAIM ++ E E+LR + +G++FQ+ DD+LD E Sbjct: 238 RLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 297 Query: 233 DLPK 236 +L K Sbjct: 298 ELGK 301 >gi|326201956|ref|ZP_08191826.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] gi|325987751|gb|EGD48577.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782] Length = 294 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 80/220 (36%), Positives = 124/220 (56%), Gaps = 8/220 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 I+ L +++ + + + A+ Y+LL GGK++R L A + + + Sbjct: 14 IEERLQNIIPEVNEYCLD-----IKKAMSYSLLAGGKRLRPLLALAVAEMLDKPFDEVIN 68 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 G AIE IH YSLIHDDLP+MDN RRGKPT H + E AI+AG+GLL A+EI+ + Sbjct: 69 FGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGEAMAILAGDGLLNMAYEIMIND 128 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 + K + + + G GM+GGQ++D+Q E I+ ++ + ++KTGAL+ Sbjct: 129 AVESKSIDKMRAAGIVAKYAGSLGMVGGQVIDLQSEGKTIESDRLKTMHRLKTGALIKAP 188 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 E+ A++ A + E E L + NLG+ FQ+ DD+LD E Sbjct: 189 VEAAAVICGADKKEFELLSGYAANLGLAFQIKDDILDIEG 228 >gi|153953855|ref|YP_001394620.1| Fps [Clostridium kluyveri DSM 555] gi|146346736|gb|EDK33272.1| Fps [Clostridium kluyveri DSM 555] Length = 293 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 131/236 (55%), Gaps = 8/236 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +++ K + LD L + T +N ++ ++ Y+L GGK+IR L ++N Sbjct: 2 EIKRVFKSLKEELDIYLREYMKDRGT-YNRKIYDSMEYSLNAGGKRIRPMLFLLTYRMYN 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++ + + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+ G+ LL Sbjct: 61 KDYSKVMDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILGGDALLNE 120 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 A I+ +N + ++ + G +GM+GGQ +DI E I +++ + K Sbjct: 121 AMSIMFRHCIGKGENA-IRACSIISESAGAEGMIGGQTVDILSENVKISVDKLYYMHSRK 179 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGA++ + S A+ A + E ++L+C+GE LG+ FQ+ DD+LD D L KK Sbjct: 180 TGAIIKASIVSAAVYASTGEEEIDKLKCYGEKLGLAFQIKDDILDVLGDDAVLGKK 235 >gi|187735758|ref|YP_001877870.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835] gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 297 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 127/236 (53%), Gaps = 9/236 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + E ID LD LL + + + + A+RY++ GGK++R L A Sbjct: 5 SLNDYITEQCALIDAALDRLLP-----AEDESPETIHKAMRYSIFAGGKRMRPVLCLAAA 59 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + AL A+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ Sbjct: 60 EACGGLAVDALVPACAVEMMHTYSLIHDDLPAMDNDDLRRGKPTSHKAFGEGVAILAGDA 119 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LLT AF +I+ + +R + L G ++GGQ+LD++ E + E +V + Sbjct: 120 LLTEAFAVIAQVDDTERYTVR-DYVRELAATGGSTMLIGGQILDLEGEHKQLSEPEVRTV 178 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KT AL+ A G + A+A++++ E L FG NLG+ FQ+ DD+LD K Sbjct: 179 YEGKTAALLTTALRFGGMSANATESQLEALTDFGYNLGLAFQVIDDILDLTASTEK 234 >gi|282889795|ref|ZP_06298334.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500369|gb|EFB42649.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 305 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 89/235 (37%), Positives = 127/235 (54%), Gaps = 9/235 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 L Q + I+ L+ L + SHM Q L A RY+LLGG K+IR L Sbjct: 14 LEEFQQAALQHIEACLEKLFPE--SHMPYQS---LFDAARYSLLGGGKRIRPLLSLAVTQ 68 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A++ A+E IH YSL+HDDLPSMDN RRGKP++H + E AI+ G+ L Sbjct: 69 ALTGTFTQAIQPACALELIHTYSLVHDDLPSMDNDDFRRGKPSLHKVFPEGHAILTGDFL 128 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 LTYAFE++ S L +L+ L + G GM+ GQ++DI ++ + + I Sbjct: 129 LTYAFEVLCSS-PGLTAQQIVELVALLAKSAGGHGMIAGQIMDISAVNQTLTLDNLQHIH 187 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL+ A E GAI++ + E+ L+ FG +G+ FQ+ DD+LD K Sbjct: 188 QTKTGALITCAVEFGAIVSGCAPVERALLQQFGNEIGLAFQIIDDVLDITSSHAK 242 >gi|257467862|ref|ZP_05631958.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185] gi|317062151|ref|ZP_07926636.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185] gi|313687827|gb|EFS24662.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185] Length = 295 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 81/233 (34%), Positives = 122/233 (52%), Gaps = 9/233 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + L N K I++ +D L + + + + ++YA+L GGK++R L+ Sbjct: 3 FKNYLDSNKKLIESSMDTYLSELN------YPEVIAEGMKYAVLNGGKRLRPILLFMILD 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + AAIE IH YSL+HDDLP++DN RRGK T H ++ E I+ G+ L Sbjct: 57 ILGCEKENGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT+AF I++ L +++ + G+ GM+GGQM+DI E ID + I Sbjct: 117 LTHAFYILTDKNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDLETLKYIH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 KTG LM E I+ A + EKE L F + +G+ FQ+ DD+LD E D Sbjct: 177 SNKTGKLMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDF 229 >gi|225849919|ref|YP_002730153.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Persephonella marina EX-H1] gi|225646113|gb|ACO04299.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Persephonella marina EX-H1] Length = 290 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 4/206 (1%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIH 89 + ++L A+ Y+L GGK++R LV E A + + + A E IH YSLIH Sbjct: 23 PSGIPEKLFDAMAYSLSAGGKRLRPILVLESAKAVGMEDIKDIVDIAVATEFIHTYSLIH 82 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP+MD+ +RRGKPT HI Y E AI+AG+GL +YAFE+IS +T D + +++ Sbjct: 83 DDLPAMDDDELRRGKPTCHIVYGEAIAILAGDGLQSYAFELISKNRTVPPDKLL-KVINI 141 Query: 150 LTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 L+H G+ GM+GGQ DI E + I KT + C+ G ++A A++ E+ Sbjct: 142 LSHGTGIYGMVGGQAADILHEKENSFNDINFIHTHKTAKFIQSCCQMGGVLADATEEEEI 201 Query: 209 RLRCFGENLGIIFQLADDLLDCEEDL 234 L+ +G +G+ FQ+ DD+LD D Sbjct: 202 SLKNYGLYIGLAFQIQDDILDEIGDE 227 >gi|319404799|emb|CBI78400.1| geranyltranstransferase [Bartonella rochalimae ATCC BAA-1498] Length = 300 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 106/233 (45%), Positives = 156/233 (66%), Gaps = 3/233 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 + L ++++ ++ LD LL A + + + L++A+R+ L GGK++R FLV + Sbjct: 2 HEFTTLLAKHAQNVEKRLDILLSHKAQNDEITRPEILINAMRHGVLNGGKRLRPFLVIQS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+LF+++ +L +G A+ECIHCYSLIHDDLP++DN +RRG+PTVHI +DE TAI+AGN Sbjct: 62 AALFDISPEDSLDIGVALECIHCYSLIHDDLPALDNDTLRRGQPTVHIAFDEGTAILAGN 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179 LLT+AFEII+ R +L+ +LT GL GM+GGQMLD++ E +E+ Sbjct: 122 ALLTFAFEIIAHKACSFSSKTRIELITALTQAAGLGGMIGGQMLDLEAEKKPQNESATIT 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q+MKT AL+ FAC++GAIM AS+ +L FG ++G+ FQL DDLLD Sbjct: 182 LQQMKTAALIRFACQAGAIMGRASKTLTHKLASFGTHIGLAFQLTDDLLDLTS 234 >gi|253583347|ref|ZP_04860545.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725] gi|251833919|gb|EES62482.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725] Length = 295 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 80/233 (34%), Positives = 124/233 (53%), Gaps = 9/233 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + L + K I++ LD L + + + + ++YA+L GGK++R L+ Sbjct: 3 FKNYLDNSKKLIESNLDIYLNELN------YPEVIAEGMKYAVLNGGKRLRPILLFMVLD 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + + + AAIE IH YSL+HDDLP++DN RRGK T H ++ E I+ G+ L Sbjct: 57 ILDCDKEKGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT+AF I++ L +++ + G+ GM+GGQM+DI E ID + + Sbjct: 117 LTHAFYILTEKNKHLPAEKIVEIVRLTSSYAGINGMIGGQMVDIASEGKKIDLETLKYMH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 KTG LM E I+ A + E+E L F E +G+ FQ+ DD+LD E D Sbjct: 177 SNKTGKLMKLPVELACIIGDADREEREVLVKFSELIGLAFQIKDDILDIEGDF 229 >gi|269962343|ref|ZP_06176693.1| geranyltranstransferase [Vibrio harveyi 1DA3] gi|269832839|gb|EEZ86948.1| geranyltranstransferase [Vibrio harveyi 1DA3] Length = 294 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 126/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N+++++ L+ L L+ A++Y LLGGK++R FLV Sbjct: 1 MQETLTSYQQRNNQQLNLWLEQL---------PHQEQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF I++ + ++ R +++ +L G GM GQ LD ++ + Sbjct: 112 GDALQTLAFTILAEGELNPNAESQRIKMVQALAQASGASGMCLGQALDLGAENRRVSLAD 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D Sbjct: 172 LEEIHRNKTGALINCAVKLGALAAGEKGLEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231 >gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens] Length = 332 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 84/243 (34%), Positives = 133/243 (54%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 + L S L+ +K ++ LD + Q+ +++ A+RY+LL GGK++R L Sbjct: 37 LEFDLDSYLRAKAKAVNVALD-------KAVPMQYPEKIREAMRYSLLAGGKRVRPALCI 89 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N A+ A+E +H SLIHDDLP MD+ +RRGKPT H + E TA++A Sbjct: 90 AACELVGGNEDLAMPSACAMEMVHTMSLIHDDLPCMDDDDLRRGKPTNHKAFGEDTAVLA 149 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176 G+ LL YAFE I+ T + + +++ L +G +G++ GQ++DI E + Sbjct: 150 GDALLAYAFEHIARATTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDRTVGLEI 209 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + + KT L+ A SGAI+ AS++E RL + N+G++FQ+ DD+LD + Sbjct: 210 LEYVHTHKTAVLLESAVVSGAILGGASEDEISRLSNYARNVGLLFQVVDDILDVTKSSAE 269 Query: 234 LPK 236 L K Sbjct: 270 LGK 272 >gi|154483652|ref|ZP_02026100.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC 27560] gi|149735562|gb|EDM51448.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC 27560] Length = 296 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 87/243 (35%), Positives = 130/243 (53%), Gaps = 13/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN ++L+E + ++ I+ D + ++ A+ Y+L GGK++R LV Sbjct: 1 MN-NFDTELKERTAYVEKIVYDYCPKEEG-----LQKIIIEAMNYSLKAGGKRLRPMLVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E LF + A AA+E IH YSL+HDDLP+MDN RRGK T H Y E I+A Sbjct: 55 ETLRLFGGDEKEAYPFMAAMEMIHTYSLVHDDLPAMDNDMYRRGKKTTHAVYGEDIGILA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLL A+E +S + K R+ L +++ + G+ GM+GGQ +D+ +E D Sbjct: 115 GDGLLNMAYETMSMAILKSKYPQRAALAMNILAYKAGIYGMIGGQTVDVINENKEKDIDT 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + I K+KT AL+ A GAI+A + E + N+GI FQ+ DD+LD + Sbjct: 175 INFIHKLKTAALIEGAMMVGAILAGVDEQAVETVEEIATNVGIAFQIQDDILDVTGTLEE 234 Query: 234 LPK 236 L K Sbjct: 235 LGK 237 >gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii] Length = 363 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 122/241 (50%), Gaps = 14/241 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + E + ++ LD+ ++ M + A+RY+LL GGK++R L Sbjct: 70 FDFKVYVAEKAICVNRALDEAIMVKDPPM-------IHEAMRYSLLAGGKRVRPMLCFAA 122 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L N A+ A+E IH SLIHDDLP MD+ +RRGKPT H Y E A++AG+ Sbjct: 123 CELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGD 182 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178 LL +AFE +++ + + + L ++G +G++ GQ+ D + + + Sbjct: 183 ALLAFAFEYLATATIGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLE 242 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ + GAI+ + E ++LR F +G++FQ+ DD+LD +L Sbjct: 243 FIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFARCIGLLFQVVDDILDVTKSSSELG 302 Query: 236 K 236 K Sbjct: 303 K 303 >gi|126173596|ref|YP_001049745.1| polyprenyl synthetase [Shewanella baltica OS155] gi|125996801|gb|ABN60876.1| farnesyl-diphosphate synthase [Shewanella baltica OS155] Length = 293 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 132/238 (55%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S +QE +R+D L L +L +A+ Y ALLGGK+IR FLV Sbjct: 2 LVSAIQEYQQRVDNQLKQRLSTLE-----HTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 T AFEI++ + ++ L G +GM GGQ +D D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 MKTGAL+ A E I A+A +++ + F +G+ FQ+ DD+LD E+L K Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILDIVATTEELGK 234 >gi|152999876|ref|YP_001365557.1| polyprenyl synthetase [Shewanella baltica OS185] gi|160874501|ref|YP_001553817.1| polyprenyl synthetase [Shewanella baltica OS195] gi|217974160|ref|YP_002358911.1| polyprenyl synthetase [Shewanella baltica OS223] gi|151364494|gb|ABS07494.1| Polyprenyl synthetase [Shewanella baltica OS185] gi|160860023|gb|ABX48557.1| Polyprenyl synthetase [Shewanella baltica OS195] gi|217499295|gb|ACK47488.1| Polyprenyl synthetase [Shewanella baltica OS223] gi|315266739|gb|ADT93592.1| Polyprenyl synthetase [Shewanella baltica OS678] Length = 293 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 95/238 (39%), Positives = 131/238 (55%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S +QE +R+D L +L +A+ Y ALLGGK+IR FLV Sbjct: 2 LVSAIQEYQQRVDNQLKQRFSTLE-----DTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 T AFEI++ + ++ L G +GM GGQ +D D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 MKTGAL+ A E I A+A +++ + F +G+ FQ+ DD+LD E+L K Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILDIVATTEELGK 234 >gi|304409467|ref|ZP_07391087.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|307303825|ref|ZP_07583578.1| Polyprenyl synthetase [Shewanella baltica BA175] gi|304351985|gb|EFM16383.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|306912723|gb|EFN43146.1| Polyprenyl synthetase [Shewanella baltica BA175] Length = 293 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 95/238 (39%), Positives = 131/238 (55%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S +QE +R+D L +L +A+ Y ALLGGK+IR FLV Sbjct: 2 LVSAIQEFQQRVDNQLKQRFSTLE-----DTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 T AFEI++ + ++ L G +GM GGQ +D D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 MKTGAL+ A E I A+A +++ + F +G+ FQ+ DD+LD E+L K Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILDIVATTEELGK 234 >gi|227890599|ref|ZP_04008404.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741] gi|227867537|gb|EEJ74958.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741] Length = 305 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 91/242 (37%), Positives = 137/242 (56%), Gaps = 9/242 (3%) Query: 1 MNGGLPSKLQ-ENSKRIDTI-LDDLLLQTASHMQT-QHNDRLLSAIRYAL-LGGKKIRSF 56 MN L K++ N + I L L + ++ + N L ++RY++ GGK+IR Sbjct: 1 MNNYLKKKMRISNLTEFEKISLPKLENEMDLYLNSLNSNQILKESMRYSVDAGGKRIRPL 60 Query: 57 LVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115 LV A + +V ++E +H YSLIHDDLP MDN +RRGKPT H ++ + Sbjct: 61 LVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAI 120 Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--ID 173 A++AG+GLLT +FE +S T + ++ + +L+ L G QGM+ GQ DI E + Sbjct: 121 AVLAGDGLLTTSFEWLS--LTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYN 178 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ + KTGAL+ +AC +G I++ AS N+ E LR +GEN G+ FQ+ DDLLD D Sbjct: 179 LEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGD 238 Query: 234 LP 235 Sbjct: 239 AK 240 >gi|37527745|ref|NP_931090.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP synthase) [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787181|emb|CAE16258.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP synthase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 305 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 86/244 (35%), Positives = 132/244 (54%), Gaps = 7/244 (2%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M+ ++ +E K ++++L+ T S + +N + + LLGGK++R FLV Sbjct: 1 MSEQNSTQFKEQLKICQQRVNNVLISTLSSVAFANNPLVHAMQHGTLLGGKRLRPFLVYA 60 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F ++ AA+ECIH +SLIHDDLP+MDN +RRG+PT HI++ E AI+AG Sbjct: 61 VGEMFGLSANNLDAPAAAVECIHAFSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAG 120 Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 + L AFEI+S + R +++ L G+ GM GGQ LD+ E ID + Sbjct: 121 DALQALAFEILSKREMPDVTTADRLEMVAELATASGIAGMCGGQALDLAAEGRHIDLHML 180 Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED--- 233 I + KTGAL+ A GA A S + L + + +G+ FQ+ DD+LD D Sbjct: 181 EQIHRHKTGALIRCAVRMGAYGAGQSGHDALPELDQYAQAIGLAFQVQDDILDVIGDTEM 240 Query: 234 LPKK 237 + K+ Sbjct: 241 IGKR 244 >gi|300214352|gb|ADJ78768.1| Geranyltranstransferase [Lactobacillus salivarius CECT 5713] Length = 305 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 91/242 (37%), Positives = 137/242 (56%), Gaps = 9/242 (3%) Query: 1 MNGGLPSKLQ-ENSKRIDTI-LDDLLLQTASHMQT-QHNDRLLSAIRYAL-LGGKKIRSF 56 MN L K++ N + I L L + ++ + N L ++RY++ GGK+IR Sbjct: 1 MNNYLKKKMRISNLTEFEKISLPKLENEMDLYLNSLNSNQILKESMRYSVDAGGKRIRPL 60 Query: 57 LVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115 LV A + +V ++E +H YSLIHDDLP MDN +RRGKPT H ++ + Sbjct: 61 LVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAI 120 Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--ID 173 A++AG+GLLT +FE +S T + ++ + +L+ L G QGM+ GQ DI E + Sbjct: 121 AVLAGDGLLTTSFEWLS--LTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYN 178 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ + KTGAL+ +AC +G I++ AS N+ E LR +GEN G+ FQ+ DDLLD D Sbjct: 179 LEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGD 238 Query: 234 LP 235 Sbjct: 239 AK 240 >gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2] gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2] Length = 302 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 130/240 (54%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M+ L L+E ++D LD+ + L+ A+RY+L GGK++R L Sbjct: 5 MDFDLKVYLEEKRVQVDAALDEYFPKGDG-----LTTALIKAMRYSLFAGGKRLRPILCI 59 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A L V A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++A Sbjct: 60 AGAEAVGGVGQRVLPVACAVELIHTYSLIHDDLPVMDDDDLRRGKPTNHKVFGEAIALLA 119 Query: 120 GNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175 G+GLLT AF +++SPK ++ +++ + G +GM+GGQ++D + + + Sbjct: 120 GDGLLTEAFSLMTSPKATENIEPPGLLEVIQIIAVAAGCEGMVGGQVVDILWEGKNAEFE 179 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 V + KTGA++ + SGAI A A ++ + +G +G+ FQ++DD+LD E D Sbjct: 180 TVKFLHTHKTGAMIRASVMSGAIAAGARESVVQHFSSYGHKIGLAFQISDDILDVEGDSE 239 >gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum Ice1] gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum Ice1] Length = 296 Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 131/238 (55%), Gaps = 10/238 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L ++L++ + +ID L + + + A+RY+L GGK++R LV Sbjct: 2 DLKAELKQLNMKIDAALSRYMP-----AEDVAPPVIHKAMRYSLFAGGKRLRPVLVLAGC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + + A+E IH YSLIHDDLP+MD+ +RRG PT H+ + E TAI+AG+G Sbjct: 57 RAVGGDEESVMAAACALEMIHTYSLIHDDLPAMDDDDLRRGMPTNHVVFGEATAILAGDG 116 Query: 123 LLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 LLT AF +++ + + Q++ L G GM+GGQ++D++ E ID + Sbjct: 117 LLTRAFGVLAEEGLRCGRSPALVLQVIAELADAAGSMGMIGGQVMDMESENKQIDVATMA 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ + GA++ S + E L +G++LG+ FQ+ DDLLD + D K Sbjct: 177 YIHAHKTGALIRASLRIGALLGGGSVEQVEALSRYGDHLGLAFQITDDLLDIQGDPEK 234 >gi|326387412|ref|ZP_08209021.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM 19370] gi|326208068|gb|EGD58876.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM 19370] Length = 305 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 104/232 (44%), Positives = 140/232 (60%), Gaps = 4/232 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65 S L++ RI +D T + RL A+RY A+ GGK++R LVT ASLF Sbjct: 12 SLLKDALVRIQQEVDACFDATLP-VPEDPRARLYEAMRYSAIGGGKRLRPLLVTAVASLF 70 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V+ A+RVG A+E IH YSLIHDD+P MDN +R GKPTVH+ YD+ TA++AG+ L Sbjct: 71 GVDRSVAVRVGTALESIHVYSLIHDDMPCMDNDSLRHGKPTVHLAYDDATAVLAGDALQA 130 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKM 183 AFEI+S P +R +L+ +L H G+ GM+GGQM+DI E D V +Q++ Sbjct: 131 LAFEILSDPDLVGDPFVRIELVRTLAHASGINGMVGGQMMDIAAETASFDLATVTRLQQL 190 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL+ A E GAI+ H + LR + N+G+ FQ+ DDLLD E D Sbjct: 191 KTGALLAAAVEMGAILGHVPPEGRTHLRGYARNIGLAFQIVDDLLDAEGDEE 242 >gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae WA1] gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae WA1] Length = 296 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 84/243 (34%), Positives = 144/243 (59%), Gaps = 15/243 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L + + I+ +D++ ++ ++ + + ++Y L GGK++R L Sbjct: 1 MN--LKEYMNIRLEEINKTIDNVFDKSDIELE----NSFIEMLKYPLDAGGKRLRPILTC 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LFN ++ ++ A+E IH YSL+HDDLP+MDN +RRGKPT H++Y E AI+ Sbjct: 55 LACELFNGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILV 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+GLLT+AF+++S KT +KD+ +L+ L++ G+ GM+ GQ +D +++ I+ + Sbjct: 115 GDGLLTHAFQLLS--KTDVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDML 172 Query: 178 FMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233 ++ KTGA++ A GAI + + + N+ E + +GE +G+ FQ+ DD+LD D Sbjct: 173 KILHAKKTGAMIRGAIRLGAISSENINDNDIENITKYGEAIGLAFQIQDDILDVISDNET 232 Query: 234 LPK 236 L K Sbjct: 233 LGK 235 >gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4] gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4] Length = 297 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 127/235 (54%), Gaps = 11/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + L+E +D LD L + + L ++RY++ GGK+IR L+ Sbjct: 2 DLKAYLKERCTLVDEALDRFLPKAD-----ELPFSLHKSMRYSVFAGGKRIRPILMLAAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + A+ A+E IH YSLIHDDLP+MD+ RRG PT H + E AI+AG+ Sbjct: 57 DAVGGDISLAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAIAILAGDA 116 Query: 123 LLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 LLT AF ++S P L +++ ++H G GM+GGQ++D++ E +D V Sbjct: 117 LLTEAFILMSRVEPSASLPPEAVLRVIQEISHCAGSHGMVGGQVVDMESEGKAEMDLATV 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ + ++GAI+ A + L +GE +G+ FQ+ADD+LD E Sbjct: 177 QYIHTHKTGALIKASVKAGAILGGADEARLASLTTYGEAIGLAFQIADDILDIEG 231 >gi|254228604|ref|ZP_04922028.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] gi|262395026|ref|YP_003286880.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] gi|151938783|gb|EDN57617.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] gi|262338620|gb|ACY52415.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] Length = 294 Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 127/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N+++++ LD L L+ A++Y LLGGK++R FLV Sbjct: 1 MQQTLTSFQQRNNQQLNLWLDQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AAIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF II+ + + R ++ +L H+ G GM GQ LD ++ + + Sbjct: 112 GDALQTLAFTIIADGQLNPAAETQRINMIKALAHSSGANGMCVGQALDLGAENRQVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231 >gi|319406284|emb|CBI79921.1| geranyltranstransferase [Bartonella sp. AR 15-3] Length = 300 Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 105/233 (45%), Positives = 151/233 (64%), Gaps = 3/233 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 + L +++ ++ LD LL A + + + L++A+RY L GGK+ R FLV + Sbjct: 2 HEFTTLLAKHAHNVEKRLDILLSHKAQNGEISRPEILINAMRYGVLNGGKRFRPFLVIQS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+LF++ +L +G A+EC+HCYSLIHDDLP++DN +RRGKPTVH +DE TAI+AGN Sbjct: 62 AALFDIPPEHSLDIGVALECLHCYSLIHDDLPALDNDTLRRGKPTVHTAFDEGTAILAGN 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179 LLT+AFEII+ + L+ +LT GL GM+GGQMLD++ E +E+ Sbjct: 122 ALLTFAFEIIAHKACSFSSKTKIDLITALTQAAGLGGMIGGQMLDLEAEKKPQNESATIT 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q+MKT AL+ FAC++GAIM AS+ ++L FG +G+ FQL DDLLD Sbjct: 182 LQQMKTAALIRFACQAGAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLDLTS 234 >gi|58617311|ref|YP_196510.1| putative geranyltranstransferase [Ehrlichia ruminantium str. Gardel] gi|58416923|emb|CAI28036.1| Possible geranyltranstransferase [Ehrlichia ruminantium str. Gardel] Length = 276 Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 93/237 (39%), Positives = 133/237 (56%), Gaps = 9/237 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ + ++ S+ L ++L + H+D LL++++Y+L GK IR FLV Sbjct: 1 MSYNISYLMENYSRLFTKELYNILPKAD------HDDILLASMKYSLFTPGKYIRPFLVN 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A +FNVN L V AIE IH YSLIHDDLP MDN RRG+ + H ++ E AI+ Sbjct: 55 ASAQIFNVNIDRTLPVSVAIELIHVYSLIHDDLPGMDNEDTRRGQLSSHKKFTEAIAILT 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ LLT AFE++S+ IR +++ LT IG QGM+ GQ+LD + D + Sbjct: 115 GDALLTLAFEVLSTINE--SPYIRCRIIQVLTQAIGYQGMIKGQVLDTETIAKDINDIKT 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +KT L ACE G I+ AS E L+ +G NLG FQ+ DD+ D +D+ K Sbjct: 173 MHTLKTACLFSAACEVGGILGGASDTELNSLKNYGLNLGFAFQIKDDIADICKDISK 229 >gi|168214394|ref|ZP_02640019.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969] gi|168215448|ref|ZP_02641073.1| geranyltranstransferase [Clostridium perfringens NCTC 8239] gi|170714145|gb|EDT26327.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969] gi|182382163|gb|EDT79642.1| geranyltranstransferase [Clostridium perfringens NCTC 8239] Length = 290 Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 79/232 (34%), Positives = 126/232 (54%), Gaps = 15/232 (6%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 + +D L + ++N L ++ Y++ +GGK+IR L+ ++ ++ Sbjct: 7 KEEVDQSLKAYFNK-----DREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKK 61 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 L AIE IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A +I+ Sbjct: 62 ILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKIL 121 Query: 132 SSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGA 187 + K +++ ++ G GM+GGQ++DI +E I ++ + KTG Sbjct: 122 VDYSLEEGKSALKATKII--ADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGE 179 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 L+ + SGA++A AS+ + ++L FG LG+ FQ+ DD+LD DL K Sbjct: 180 LIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231 >gi|91974793|ref|YP_567452.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5] gi|91681249|gb|ABE37551.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5] Length = 321 Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 105/237 (44%), Positives = 142/237 (59%), Gaps = 5/237 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 +L ++ + +L LL + RL+ AIRYA L GGK++R FL E A Sbjct: 22 DFAKRLDTTAEDTEALLGRLLSDDLLPDEITRPRRLMEAIRYATLGGGKRLRPFLAVESA 81 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F V +AL VGAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ TAI+AG+ Sbjct: 82 AVFGVERASALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAGDA 141 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178 LLT+AF+II+ + +R L L GL GM+GGQ+LD+ E + V Sbjct: 142 LLTFAFDIITRDEVHRDPQVRLDLNRVLARCAGLGGMVGGQILDLAGEGRFGDREPVDVA 201 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q+MKTGAL+ + C +GAI+ A L +G LG FQ+ADDLLD E D Sbjct: 202 RLQQMKTGALLRYGCVAGAILGEAPPEHYRALDDYGRALGEAFQIADDLLDVEGDAA 258 >gi|319407760|emb|CBI81407.1| geranyltranstransferase [Bartonella sp. 1-1C] Length = 300 Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 104/233 (44%), Positives = 154/233 (66%), Gaps = 3/233 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 + L ++++ ++ LD LL A + + + L++A+R+ L GGK++R FLV + Sbjct: 2 HEFTTLLAKHAQNVEKRLDMLLSHKAQNDEIIRPEMLINAMRHGVLNGGKRLRPFLVIQS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+LF++ +L +G A+ECIHCYSLIHDDLP++DN +RRG+PTVHI +DE TAI+AGN Sbjct: 62 AALFDIPPEDSLDIGVALECIHCYSLIHDDLPALDNDTLRRGQPTVHIAFDEATAILAGN 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179 LLT+AFEII+ + +L+ +LT GL GM+GGQ+LD++ E +E Sbjct: 122 ALLTFAFEIIAHKTCSFSPKTKIELITALTQAAGLGGMIGGQLLDLEAEKKPHNENATTT 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q+MKT AL+ FAC++GAIM AS+ +L FG ++G+ FQL DDLLD Sbjct: 182 LQQMKTAALIRFACQAGAIMGRASKTLTHQLASFGTHIGLAFQLTDDLLDLTS 234 >gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335] gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335] Length = 307 Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats. Identities = 82/238 (34%), Positives = 132/238 (55%), Gaps = 14/238 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L S L + S +++ +D + + + +++ A+RY+LL GGK++R L Sbjct: 11 TFDLKSYLSDRSCQVEAAID-------AALPVVYPEQIYEAMRYSLLAGGKRLRPILCLA 63 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + + A+ A+E +H SLIHDDLP+MD+ RRGK T H Y E A++AG Sbjct: 64 TCEMLGASANIAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEGVAVLAG 123 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLT----HNIGLQGMLGGQMLDIQDEF--IDE 174 + LLTYAFE I++ Q D Q +L + +G +G++GGQ++D+ E +DE Sbjct: 124 DALLTYAFEHIATQTPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQVVDLASEGTLVDE 183 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I KT AL+ + SGA++A AS+ +RLR + + +G+ FQ+ DD+LD Sbjct: 184 ETLTFIHMHKTAALLEVSVTSGAMLAGASEAVVDRLRRYAQRIGLAFQIVDDVLDITS 241 >gi|27376057|ref|NP_767586.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110] gi|27349196|dbj|BAC46211.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110] Length = 307 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 104/238 (43%), Positives = 146/238 (61%), Gaps = 5/238 (2%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61 +L + + + +L LL + RL+ A+RY+ L GGK++R FLV E Sbjct: 7 SDFAKRLDKTADDTEALLGRLLADDILPDEIARPKRLMDAMRYSSLNGGKRLRPFLVVES 66 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H + D+ TAI+AG+ Sbjct: 67 AAVFGVPREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKKTDDATAILAGD 126 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQV 177 GLLT AF+I++ + N+R L +L G+ GM+GGQ+LD+ E + V Sbjct: 127 GLLTLAFDIVTRDEIHRDANVRLLLTRALARCAGIGGMVGGQILDLAGEGRFGGNEPIDV 186 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 IQ+MKTGAL+ + C +GAI+ A+ E + L +G LG FQ+ADDLLD E D Sbjct: 187 ARIQQMKTGALLRYGCIAGAILGQATAKEYQALDDYGRALGEAFQIADDLLDVEGDAA 244 >gi|190571159|ref|YP_001975517.1| geranyltranstransferase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018563|ref|ZP_03334371.1| geranyltranstransferase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357431|emb|CAQ54865.1| geranyltranstransferase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995514|gb|EEB56154.1| geranyltranstransferase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 260 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 131/212 (61%), Gaps = 12/212 (5%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+++ + ++L+SA+RY LL K IRSFLV +S+FN+ A+ AAIE Sbjct: 10 LVVEVNKLLPENSENKLISAMRYVLLAPAKHIRSFLVIASSSIFNIKVEKAITAAAAIEF 69 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSLIHDDLP MDN RRG+P+ H ++ E TA++AG+ LLT AFE++S ++ Sbjct: 70 IHAYSLIHDDLPCMDNSDTRRGQPSCHKKFGEATAVLAGDALLTLAFEVLSLLNCEI--- 126 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 + L+ IG++GM+GGQ+LDI D ++ I MKT L +CE GAI+ Sbjct: 127 -----IKVLSQAIGMKGMVGGQILDI---GADFDKIKEIHLMKTAKLFAASCEIGAIIGG 178 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A+ E+E L +G NLG+IFQ DD+ D E+D Sbjct: 179 ATDKEREALYNYGINLGLIFQAKDDIEDYEQD 210 >gi|110802213|ref|YP_699103.1| geranyltranstransferase [Clostridium perfringens SM101] gi|110682714|gb|ABG86084.1| geranyltranstransferase [Clostridium perfringens SM101] Length = 290 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 79/231 (34%), Positives = 123/231 (53%), Gaps = 13/231 (5%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 + +D L + ++N L ++ Y++ +GGK+IR L+ ++ ++ Sbjct: 7 KEEVDQSLKAYFDK-----DREYNKVLYDSMAYSVNVGGKRIRPILMLLSYYIYKSDYKK 61 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 L AIE IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A +I+ Sbjct: 62 ILTPAIAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKIL 121 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGAL 188 + + + + G GM+GGQ++DI +E I ++ + KTG L Sbjct: 122 VDYSLEEGISAL-KATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGEL 180 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + + SGAI+A AS+ + ++L FG LG+ FQ+ DD+LD DL K Sbjct: 181 IKASIMSGAILAEASERDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231 >gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379] gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379] Length = 297 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 128/235 (54%), Gaps = 11/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + L+E R+D LD L + +T+ L A+RY++ GGK++R L+ Sbjct: 2 DLKAYLKEQCARVDAALDSYLPR-----ETELPHSLHKAMRYSVFAGGKRVRPILMLAAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + A+ A+E IH YSLIHDDLP+MD+ RRG PT H + E AI+AG+ Sbjct: 57 QAVGGDTEVAIPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDA 116 Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 LLT AF+++S+P + R ++ + G GM+GGQ++D++ E ID V Sbjct: 117 LLTEAFKLLSNPACAAGVPSEARLAVIHQIASCAGSHGMVGGQVVDMESEGKSDIDLPTV 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ A +GA++ A + + + +G G+ FQ+ADD+LD E Sbjct: 177 QYIHTHKTGALIKAAVVAGALLGGADREKLAAITRYGSAAGLAFQIADDILDIEG 231 >gi|240851259|ref|YP_002972662.1| geranyltranstransferase [Bartonella grahamii as4aup] gi|240268382|gb|ACS51970.1| geranyltranstransferase [Bartonella grahamii as4aup] Length = 300 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 111/233 (47%), Positives = 153/233 (65%), Gaps = 3/233 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 + L ++ ++ LD LL + + L+ A+RY L GGK++R FLV + Sbjct: 2 HEFTTLLAKHGHTVEKRLDTLLSDQIQNGEISRPKNLIKAMRYGVLNGGKRLRPFLVIQS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+LF++ +L V A+ECIHCYSLIHDDLP+MDN +RRGKPTVHI +DE TAI+AGN Sbjct: 62 AALFDIPVEYSLDVACALECIHCYSLIHDDLPAMDNDILRRGKPTVHIAFDEATAILAGN 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179 LLT+AFEII+ + L +IR +L+ SL + GL GMLGGQMLD++ E + + + Sbjct: 122 ALLTFAFEIIAHKASTLSTDIRIKLITSLAQSAGLGGMLGGQMLDLEAEKKPQGSSDIIT 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q MKT AL+ FAC++GAI+ +AS+ E+L FG LG+ FQL DDLLD Sbjct: 182 LQHMKTAALISFACQAGAIIGNASKELTEKLTDFGTYLGLAFQLTDDLLDVTA 234 >gi|168206126|ref|ZP_02632131.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987] gi|170662394|gb|EDT15077.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987] Length = 290 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 78/232 (33%), Positives = 126/232 (54%), Gaps = 15/232 (6%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 + +D L + ++N L ++ Y++ +GGK+IR L+ ++ ++ Sbjct: 7 KEEVDQSLKAYFNK-----DREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKK 61 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 L AIE IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A +++ Sbjct: 62 ILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVL 121 Query: 132 SSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGA 187 + K +++ ++ G GM+GGQ++DI +E I ++ + KTG Sbjct: 122 VDYSLEEGKSALKATKII--ADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGE 179 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 L+ + SGA++A AS+ + ++L FG LG+ FQ+ DD+LD DL K Sbjct: 180 LIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231 >gi|86747642|ref|YP_484138.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2] gi|86570670|gb|ABD05227.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2] Length = 308 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 106/237 (44%), Positives = 143/237 (60%), Gaps = 5/237 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 +L ++ + +L LL + RL+ AIRY+ L GGK++R FL E A Sbjct: 9 DFAKRLDATAEDTEALLGRLLSDDLLPDEIARPRRLMEAIRYSTLGGGKRLRPFLAVESA 68 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F V+ AL VGAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ TAI+AG+ Sbjct: 69 AVFGVDRAGALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAGDA 128 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178 LLT AF+II+ + +R L L GL GM+GGQMLD+ E + V Sbjct: 129 LLTLAFDIITRDEVHQDAKVRLDLNRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVA 188 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q+MKTGAL+ + C +GAI+ AS + L +G LG FQ+ADDLLD E D Sbjct: 189 RLQQMKTGALLRYGCVAGAILGQASPEHYKALDDYGRALGEAFQIADDLLDVEGDAA 245 >gi|169343610|ref|ZP_02864609.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495] gi|169298170|gb|EDS80260.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495] Length = 290 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 77/231 (33%), Positives = 123/231 (53%), Gaps = 13/231 (5%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 + +D L + ++N L ++ Y++ +GGK+IR L+ ++ ++ Sbjct: 7 KEEVDQSLKAYFNK-----DREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKK 61 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 L AIE IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A +++ Sbjct: 62 ILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVL 121 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGAL 188 + + + + G GM+GGQ++DI +E I ++ + KTG L Sbjct: 122 VDYSLEEGTSAL-KATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGEL 180 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + + SGA++A AS+ + ++L FG LG+ FQ+ DD+LD DL K Sbjct: 181 IKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231 >gi|327439759|dbj|BAK16124.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris StLB046] Length = 294 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 86/235 (36%), Positives = 138/235 (58%), Gaps = 10/235 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L + N +++T + +L+ + L ++ Y+L GGK+IR V Sbjct: 1 MENMLKQFIDHNIPQLETTMYELVESIKA------PAHLKESMLYSLKAGGKRIRPLFVV 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 ++N + T+ VG+A+E IH YSLIHDDLPSMD+ +RRGKPT H+ Y E A +A Sbjct: 55 AVCEMYNQSLETSYTVGSAVEMIHTYSLIHDDLPSMDDDELRRGKPTNHVVYGEALATLA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ L T AF +I+ L R +L+ L+ G +GM+GGQ+LD+ E ++ ++ Sbjct: 115 GDALNTLAFGVIARLNN-LSAEKRIELVNLLSVAAGTEGMVGGQVLDMDGEKRLLNLKEL 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ F+ E+GA++A+AS +++E L + ++G+ FQ+ DD+LD E Sbjct: 174 ETVHVNKTGALLRFSIEAGAVLANASISDREALVEYAHHIGLAFQIQDDILDIEG 228 >gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum V4] gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum V4] Length = 300 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 8/232 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + + + E + +++ L + A L AI Y L GGK++R L A Sbjct: 8 EIENYIFEQQQVVESALRKFVTGKAKK-----PRILHEAIDYCLFSGGKRLRPILCLAGA 62 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 N AL + A+ECIH YSL+HDDLPSMDN RRGKP++H Y E AI+ G+ Sbjct: 63 HAVCRNSDCALPMACAVECIHTYSLVHDDLPSMDNDDFRRGKPSLHKIYGEALAILTGDA 122 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LL AFE+ S + SQ++ L G + ++ GQ+ D++ E I TQ+ I Sbjct: 123 LLALAFEVASLCSPLGRTYPVSQMIWELARTAGSRALVAGQVADLEAEGKEIGLTQLRYI 182 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT AL+ + GA+ A A + + + +G LG+ FQ+ DD+LD + Sbjct: 183 HCRKTAALITTSLRLGAMAADADKKTLDLITRYGRALGLAFQIIDDILDVTQ 234 >gi|254787182|ref|YP_003074611.1| geranyltranstransferase [Teredinibacter turnerae T7901] gi|237687258|gb|ACR14522.1| geranyltranstransferase [Teredinibacter turnerae T7901] Length = 295 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 92/245 (37%), Positives = 137/245 (55%), Gaps = 16/245 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN L + + S +++ L + +H R+ A+RY+L+ GGK+IR LV Sbjct: 1 MNPALQEFINDTSLQVNRCL-----EGWTHPADAVAPRVTEAMRYSLMNGGKRIRPTLVY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A +V + L A+ECIH YSLIHDDLP+MDN +RRGKPT HI +DE TAI+A Sbjct: 56 AAARAVSVPNEATLAGAGAVECIHAYSLIHDDLPAMDNDDLRRGKPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---- 175 G+GL T AFE +S+ + ++ +L G +GM+ GQM+D++ E + + Sbjct: 116 GDGLQTLAFEKLSTIE---DPATAVAMIRTLALASGDKGMVAGQMIDMESEGLQQAFTIS 172 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233 + I + KTGAL+ A GA ASQ + + L + + +G+ FQ+ DD+LD D Sbjct: 173 HLEKIHRHKTGALIRAAVLMGARSVQASQEQTQSLIRYADAIGLAFQVQDDILDVISDTA 232 Query: 234 -LPKK 237 L K+ Sbjct: 233 TLGKR 237 >gi|150016579|ref|YP_001308833.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052] gi|149903044|gb|ABR33877.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052] Length = 289 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 84/230 (36%), Positives = 132/230 (57%), Gaps = 12/230 (5%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 K I+ L++ + S N + + Y+L +GGK+IR L++ ++ ++ Sbjct: 7 KKDINEYLENYFSEKGS-----FNRIIYDSCSYSLNIGGKRIRPILLSLTYYIYKEDYRK 61 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 + + AA+E IH YSLIHDDLP MDN +RRGKPT HI++ E A++AG+ LL A I+ Sbjct: 62 VIPMAAAMEMIHTYSLIHDDLPCMDNDDLRRGKPTNHIKFQENIAVLAGDALLNEAMIIM 121 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 + ++N + + G +GM+GGQ++DI E I + ++ + KTGAL+ Sbjct: 122 MDYALKSENNAL-RAAHEIAVAAGAEGMIGGQVVDIISEGKKISQDELEYMHAKKTGALI 180 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 A SGAI+A A +++ LR +GE LG++FQ+ DD+LD D L K Sbjct: 181 RAAIVSGAILAEAPEDDLRLLREYGEKLGLVFQIKDDILDVIGDSNVLGK 230 >gi|269965070|ref|ZP_06179235.1| geranyltranstransferase [Vibrio alginolyticus 40B] gi|269830373|gb|EEZ84598.1| geranyltranstransferase [Vibrio alginolyticus 40B] Length = 294 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 128/240 (53%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N+++++ LD L L+ A++Y LLGGK++R FLV Sbjct: 1 MQQTLTSFQQRNNQQLNLWLDQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AAIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF II+ + + + R ++ +L H+ G GM GQ LD ++ + + Sbjct: 112 GDALQTLAFTIIADGQLSPAAEAQRINMIKALAHSSGASGMCVGQALDLGAENRQVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231 >gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110] gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110] Length = 309 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 131/242 (54%), Gaps = 14/242 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L S L++ + ++ LD + +++ A+RY+LL GGK++R L Sbjct: 16 DFDLASYLKDKKQLVEAALDQ-------SLPIIRPEKIYEAMRYSLLAGGKRLRPILCLT 68 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L +L A+E IH SLIHDDLP+MD+ RRGK T H Y E AI+AG Sbjct: 69 TCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAG 128 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + LL+YAFE +++ + ++ L +G G++GGQ+LD++ E + + Sbjct: 129 DALLSYAFEYVATQTRNVDLANLMNVIARLGRTVGAAGLVGGQVLDLESEGKLDVTVDTL 188 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234 I KTGAL+ + SGAI+A A Q + ERL + +N+G+ FQ+ DD+LD E+L Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKQEDVERLSRYAQNIGLAFQIIDDILDVTASTEEL 248 Query: 235 PK 236 K Sbjct: 249 GK 250 >gi|91225061|ref|ZP_01260283.1| geranyltranstransferase [Vibrio alginolyticus 12G01] gi|91190004|gb|EAS76275.1| geranyltranstransferase [Vibrio alginolyticus 12G01] Length = 294 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 128/240 (53%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N+++++ LD L L+ A++Y LLGGK++R FLV Sbjct: 1 MQQTLTSFQQRNNQQLNLWLDQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AAIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF II+ + + + R ++ +L H+ G GM GQ LD ++ + + Sbjct: 112 GDALQTLAFTIIADGQLSPAAEAQRINMIKALAHSSGASGMCIGQALDLGAENRQVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231 >gi|110799631|ref|YP_696503.1| geranyltranstransferase [Clostridium perfringens ATCC 13124] gi|168210817|ref|ZP_02636442.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626] gi|182625644|ref|ZP_02953413.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721] gi|110674278|gb|ABG83265.1| geranyltranstransferase [Clostridium perfringens ATCC 13124] gi|170711106|gb|EDT23288.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626] gi|177909046|gb|EDT71521.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721] Length = 290 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 78/231 (33%), Positives = 123/231 (53%), Gaps = 13/231 (5%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 + +D L + ++N L ++ Y++ +GGK+IR L+ ++ ++ Sbjct: 7 KEEVDQSLKAYFNK-----DREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKK 61 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 L AIE IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A +I+ Sbjct: 62 ILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKIL 121 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGAL 188 + + + + G GM+GGQ++DI +E I ++ + KTG L Sbjct: 122 VDYSLEEGISAL-KATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGEL 180 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + + SGA++A AS+ + ++L FG LG+ FQ+ DD+LD DL K Sbjct: 181 IKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231 >gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399] gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399] Length = 295 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 12/242 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M + Q ++ L L +T +D+L +++ Y+L+ GGK++R L+ Sbjct: 1 MGAEMKELWQSRRTLVERALQAELDRTDI-----LDDKLRASMAYSLMAGGKRLRPILLM 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A V+ + A+E IH YSLIHDDLP+MDN RRGK T H YDE TAI+A Sbjct: 56 AAADAVGVDGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYDEGTAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 G+ LLT AF +I + + +++ G +GM+GGQMLD++ E I ++ Sbjct: 116 GDALLTLAFTVILR-QQDVPAERLLRVVDETGRAAGAEGMVGGQMLDLEAENRRISMEEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234 + KTGAL A GAI+A AS+ + L + ++ G+ FQ+ DD+LD D+ Sbjct: 175 RRVHMGKTGALFRAALRCGAILAGASERQLAALTAYADHFGLAFQITDDILDVIGTAEDI 234 Query: 235 PK 236 K Sbjct: 235 GK 236 >gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis Ellin345] gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis Ellin345] Length = 315 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 86/233 (36%), Positives = 137/233 (58%), Gaps = 12/233 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L L++ D L+ LL TQ + A+R+++ GGK++R LV E A Sbjct: 24 LKETLEQGRILADAALERLLPP-----GTQRPPSIHQAMRHSVFAGGKRLRPILVMEAAR 78 Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + +GAA+E +H YSLIHDDLP++DN +RRG+PT H+ + E TAI+AG+ Sbjct: 79 MITGSLPDGVDELGAALEMLHTYSLIHDDLPALDNDDLRRGRPTCHVAFGEATAILAGDA 138 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFI--DETQVFM 179 L TYA+E+++ +T R Q++ + H G + GM+GGQ+LD++ E D V Sbjct: 139 LQTYAYEVMARLRTT--AEARVQIIEEVAHATGTIDGMIGGQVLDLEAEHTHADAATVEY 196 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I + KTGAL+ + +G + A A + + +R+R FG++ G+ FQ+ DD+LD + Sbjct: 197 IHRSKTGALITASVVAGGLYAGADKAQVQRIREFGKSAGLAFQIVDDVLDVTQ 249 >gi|33152401|ref|NP_873754.1| farnesyl-diphosphate synthase [Haemophilus ducreyi 35000HP] gi|33148624|gb|AAP96143.1| geranyltranstransferase [Haemophilus ducreyi 35000HP] Length = 308 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 91/241 (37%), Positives = 133/241 (55%), Gaps = 11/241 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M L + L +RI+ L + L Q+ L A+ YA LLGGK+IR FL+ Sbjct: 12 MTYSLTTDLNAIQQRINHFLSNQLPQS-----PTEQPPLNQAMAYAVLLGGKRIRPFLMY 66 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + V T AAIE IH YSL+HDDLP+MDN +RRGKPT HI +DE TAI+A Sbjct: 67 TTGKMLGVPLTTLDHSAAAIEAIHAYSLVHDDLPAMDNDQLRRGKPTCHIAFDEATAILA 126 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 GN L AFE+I++ L D + Q + +L+ G +GM GQ LD +++ ++ T++ Sbjct: 127 GNALQALAFELIANA-PHLTDWQKVQQIRTLSTAAGAKGMCLGQNLDLLAENKSLNLTEL 185 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ + ++ +QN K+ L + + +G+ FQ+ DD+LD Sbjct: 186 EQIHRHKTGALIVASVLMAVNLSDHAQNNAIKQPLERYAQAIGLAFQVQDDILDVIGQTD 245 Query: 236 K 236 K Sbjct: 246 K 246 >gi|317471815|ref|ZP_07931152.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA] gi|316900706|gb|EFV22683.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA] Length = 297 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 122/237 (51%), Gaps = 11/237 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN +L++ I+ ILD L + +T +L A+ + GGK++R L+ Sbjct: 1 MNE-FDQELKKRISHIEEILDHYLPKPEGFQKT-----VLKAMNTTVKAGGKRLRPMLME 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E +F AAIE IH YSLIHDDLP++DN RRG+ T HI Y E AI+A Sbjct: 55 ETYKMFGGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175 G+ LL YAFE SS ++ ++ + L G+ GM+GGQ D++ E + Sbjct: 115 GDALLNYAFETASSAFALEDADLPKVAEAIRILARKPGIYGMIGGQAADVELEGTVLSME 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 Q+ I KT AL+ GA++A AS + + + G +G+ FQ+ DD+LD Sbjct: 175 QIMFIHHNKTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILDITG 231 >gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum] Length = 297 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 94/241 (39%), Positives = 135/241 (56%), Gaps = 12/241 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + + L KR+D L+ L + S + RL IRY+LL GGK+IR L Sbjct: 2 EITAYLDMQKKRVDKALEALFERELS----REYGRLAEGIRYSLLAGGKRIRPVLALAAI 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + L + +E +H YSL+HDDLP+MDN +RRG+PT H+ Y E AI+AG+ Sbjct: 58 EAVGGDGESLLPLTLPLELVHTYSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDA 117 Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 LLT+AF ++S P L + R +++ L+ GL GM+GGQ LDI E + ++ Sbjct: 118 LLTHAFTLLSDPVYDKVLPASRRMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELE 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLP 235 + + KTGAL+ + G I+A AS E L +GE +GI FQ+ADDLLD E+L Sbjct: 178 NLHRHKTGALLRASVRIGGILAGASSEWVEALTRYGEAVGIAFQIADDLLDVLGTAEELG 237 Query: 236 K 236 K Sbjct: 238 K 238 >gi|167746999|ref|ZP_02419126.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662] gi|167653959|gb|EDR98088.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662] Length = 297 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 122/237 (51%), Gaps = 11/237 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN +L++ I+ ILD L + +T +L A+ + GGK++R L+ Sbjct: 1 MNE-FDQELKKRISHIEKILDHYLPKPEGFQKT-----VLKAMNTTVKAGGKRLRPMLME 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E +F AAIE IH YSLIHDDLP++DN RRG+ T HI Y E AI+A Sbjct: 55 ETYKMFGGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175 G+ LL YAFE SS ++ ++ + L G+ GM+GGQ D++ E + Sbjct: 115 GDALLNYAFETASSAFALEDADLPKVAEAIRILARKPGIYGMIGGQAADVELEGTVLSME 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 Q+ I KT AL+ GA++A AS + + + G +G+ FQ+ DD+LD Sbjct: 175 QIMFIHHNKTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILDITG 231 >gi|83593950|ref|YP_427702.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170] gi|83576864|gb|ABC23415.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170] Length = 305 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 104/240 (43%), Positives = 147/240 (61%), Gaps = 12/240 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61 L + + I+ L L+ T R++ A+RYA L GGK++R FLV + Sbjct: 8 SHLNEVMAAEALAINDHLSQLMPATDGP-----EGRVVDAMRYAALEGGKRLRPFLVLQS 62 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A LF+V+ AL V AAIE IHCYSLIHDDLP+MDN +RRG+PTVH QYDE TAI+AG+ Sbjct: 63 AQLFSVSRACALNVAAAIEMIHCYSLIHDDLPAMDNDDLRRGRPTVHRQYDEPTAILAGD 122 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDET 175 LLT AFE+I+ P T +R L+ L G +GM+GGQM+D+ E +D Sbjct: 123 ALLTKAFEVIALPGTHSDPAVRCDLVTELAIAAGAKGMVGGQMIDLMAERGLIDGALDVP 182 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + ++KTG L+ F+ +GAI+ A +++++ L + +LG+ FQ+ADDLLD E D Sbjct: 183 AITRMHQLKTGRLISFSSIAGAILGKAPRSQRQALFNYAHDLGLAFQIADDLLDVEGDTA 242 >gi|289207601|ref|YP_003459667.1| polyprenyl synthetase [Thioalkalivibrio sp. K90mix] gi|288943232|gb|ADC70931.1| Polyprenyl synthetase [Thioalkalivibrio sp. K90mix] Length = 297 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 86/231 (37%), Positives = 126/231 (54%), Gaps = 8/231 (3%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASL 64 L+ +RI+T+LD L ++ + RL+ A+RYA L GGK++R LV + Sbjct: 7 SEALKAYQRRIETVLDQRLAADSAP-----DPRLIEAMRYATLSGGKRLRPVLVYAAGAT 61 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + AA+E +H YSLIHDDLP+MDN +RRG+PT H +DE TAI+AG+ L Sbjct: 62 CGAPDDVLDAMAAAVEMVHVYSLIHDDLPAMDNDDLRRGRPTCHRAFDEATAILAGDALQ 121 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQK 182 AFEI+++ L + L H GL GM GGQ +D + ID ++ + + Sbjct: 122 ACAFEIMTAGVRALPGTAALDALAELAHAAGLHGMAGGQAIDLGACGKPIDLAELERMHR 181 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +KTGAL+ + GAI + L + E +G+ FQ+ DD+LD E D Sbjct: 182 LKTGALIRVSVRLGAIAGGVPGDALGHLTRYAECIGLAFQIRDDVLDVEGD 232 >gi|18310802|ref|NP_562736.1| geranyltranstransferase [Clostridium perfringens str. 13] gi|18145483|dbj|BAB81526.1| geranyltranstransferase [Clostridium perfringens str. 13] Length = 301 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 134/238 (56%), Gaps = 12/238 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHM--QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65 L++ + I+++ +++ ++ ++N L ++ Y++ +GGK+IR L+ ++ Sbjct: 7 LEDTAMNINSLKEEVDQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIY 66 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 ++ L AIE IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL Sbjct: 67 KSDYKKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLN 126 Query: 126 YAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQ 181 A +I+ + K +++ ++ G GM+GGQ++DI +E I ++ + Sbjct: 127 EAMKILVDYSLEEGKSALKATKII--ADAAGSDGMIGGQIVDIINEDKEEISLKELDYMH 184 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KTG L+ + SGA++A AS+ + ++L FG LG+ FQ+ DD+LD DL K Sbjct: 185 LKKTGELIKASIMSGAVLAEASEGDIKKLEGFGYKLGLAFQIKDDILDVVGNAKDLGK 242 >gi|182677419|ref|YP_001831565.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633302|gb|ACB94076.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 310 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 108/243 (44%), Positives = 150/243 (61%), Gaps = 8/243 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61 +L + ++ + LD LL + +T R L A+RYA L GGK++R FL+ E Sbjct: 8 EDFQQRLTQIAEATEKTLDHLLGPSPLPGETLRPPRFLEAMRYASLGGGKRLRPFLLVET 67 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A LF + LR +A+E IHCYSL+HDDLP++DN +RRG+PT H YDE TAI+ G+ Sbjct: 68 ARLFGIEGEGVLRAASALEMIHCYSLVHDDLPALDNDDLRRGRPTTHKAYDEATAILVGD 127 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQV 177 GLLTYAF++++ P T IR +L+L+L G+ GM+GGQ+LDI+ E V Sbjct: 128 GLLTYAFDVLADPATHKDPAIRIELVLALARAAGVGGMVGGQVLDIEAEQAKTPHTAEAV 187 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234 +Q MKTGAL+ +A +GAI A S+ +E L +G+ LG FQ+ADD+LD E D L Sbjct: 188 IELQSMKTGALLHYAVIAGAIFAGVSKQTREALSAYGQALGAAFQVADDILDVEADTEAL 247 Query: 235 PKK 237 KK Sbjct: 248 GKK 250 >gi|296327940|ref|ZP_06870475.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154896|gb|EFG95678.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 297 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 86/243 (35%), Positives = 131/243 (53%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN L+E + +T L L + + + + + + YA L GGK++R FL+ Sbjct: 1 MN-DFQVYLKEKTDFFETELKKELKELS------YPETIAKGMEYAILNGGKRLRPFLLF 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ Sbjct: 54 ATLELLNQNIEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176 G+ LLTYAF ++S +L + + ++S T G+ GM+GGQM+DIQ E ID Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGIDGMIGGQMIDIQSENKKIDLET 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + I KTG L+ E I+A+ ++++E L + + +G+ FQ+ DD+LD E D Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANLEKDKREVLEEYADLIGLAFQVKDDILDVEGTFED 233 Query: 234 LPK 236 L K Sbjct: 234 LGK 236 >gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563] gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563] Length = 294 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 140/242 (57%), Gaps = 15/242 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L + K I+ ++++ ++ ++ + + ++Y L GGK++R L Sbjct: 1 MN--LKEYMNIRLKDINNNIENIFDKSDIELE----NSFIEMLKYPLDAGGKRLRPVLTL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF ++ A+ ++E IH YSL+HDDLP+MDN +RRGKPT H++Y E AI+ Sbjct: 55 LACELFEGDYKKAVIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILV 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+GLLT+AF+++S K +KD+ +L+ L++ G+ GM+ GQ +D +++ I+ + Sbjct: 115 GDGLLTHAFQLLS--KADVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDML 172 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234 ++ KT A++ A GAI + + N+ E + +GE +G+ FQ+ DD+LD D L Sbjct: 173 KVLHAKKTAAMIRGAVRLGAISSE-NDNDIENITKYGEAIGLAFQIQDDILDVISDNETL 231 Query: 235 PK 236 K Sbjct: 232 GK 233 >gi|304415488|ref|ZP_07396128.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1] gi|304282658|gb|EFL91181.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1] Length = 313 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 83/235 (35%), Positives = 129/235 (54%), Gaps = 10/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 +L +R+D L + + SH + +L+ AIRY +L GGK+IR +LV Sbjct: 9 DFHQQLTLYQRRVDEKLKNFIQPLPSHSR-----QLIEAIRYTVLCGGKRIRPYLVYATG 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F ++ + AA+ECIH YSL+HDDLP+MD+ +RRG+P+ HI++ E AI+AG+ Sbjct: 64 KMFGLSPGSLDVAAAAVECIHAYSLVHDDLPAMDDDNLRRGQPSCHIKFGEAIAILAGDA 123 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF +++ P + R +++ L IG GM GQ LD+ E I + Sbjct: 124 LQTLAFSLLADQPMPNVTLENRLKIVSELAKAIGAGGMCAGQALDLAAEHCQISLASLEK 183 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I + KTGAL+ A GA+ A S+ L + + +G+ FQ+ DD+LD + Sbjct: 184 IHRHKTGALIRAAVRIGALAAGERSEKTLSLLDDYADAIGLAFQVQDDILDITGE 238 >gi|260494283|ref|ZP_05814414.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33] gi|260198429|gb|EEW95945.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33] Length = 297 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 84/243 (34%), Positives = 133/243 (54%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN L+E + +T L L + + + + + + + YA L GGK++R FL+ Sbjct: 1 MN-DFQVYLKEKTDFFETELKKELKELS------YPETIANGMEYAILNGGKRLRPFLLF 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N + ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ Sbjct: 54 VTLELLNEDIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176 G+ LLTYAF ++S +L + + ++S T G+ GM+GGQM+DI+ E ID Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLET 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + I KTG L+ + E I+A+ ++++E L + + +G+ FQ+ DD+LD E D Sbjct: 174 LKYIHSHKTGKLIKLSIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFED 233 Query: 234 LPK 236 L K Sbjct: 234 LGK 236 >gi|325578412|ref|ZP_08148547.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392] gi|325160148|gb|EGC72277.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392] Length = 297 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 88/240 (36%), Positives = 136/240 (56%), Gaps = 11/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M+ ++L++ RI+ L + + S +N L A++Y LLGGK++R FLV Sbjct: 1 MSYQFGTELKQVQDRINQFLANQFEEIDS-----YNAHLRDAMKYGLLLGGKRVRPFLVY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AAIE IH YSLIHDDLP+MDN +RRG+PT HI +DE TAI+A Sbjct: 56 ATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLPAMDNDELRRGQPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ L +AFEI++ + L + QL+ L G+QGM GQ LD+ E ++ ++ Sbjct: 116 GDALQAFAFEILTEAPS-LSAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +I + KTGAL+ A + G I + ++ +++L + + +G+ FQ+ DD+LD E D Sbjct: 175 ELIHRNKTGALLTAALKLGFICSPHFENKELEQQLERYSQTIGLAFQVQDDILDIEGDSA 234 >gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121] gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121] Length = 293 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 7/231 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L++ S + +D L Q S ++L +A+RY+L GGK+IR L A L Sbjct: 3 LKQFSTYTQSRVDQYLEQQLSDYAP--ANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGD 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AA+E IH YSLIHDDLP+MDN +RRGKPT HIQ+DE TAI+AG+ L T+A Sbjct: 61 ISSLTDASAAALESIHAYSLIHDDLPAMDNDELRRGKPTCHIQFDEATAILAGDALQTFA 120 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185 FE++S+P T + + +L+ L G GM+ GQM+D +++ I ++ + KT Sbjct: 121 FELLSNP-TSAQPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQMHVHKT 179 Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 GAL+ + GA+ + +L + +G+ FQ+ DD++D D Sbjct: 180 GALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTE 230 >gi|238795560|ref|ZP_04639075.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969] gi|238720679|gb|EEQ12480.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969] Length = 306 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 132/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +L + +R++ L D + + L+ A+RY A+LGGK++R +LV Sbjct: 9 DFSQQLTAHQQRVNQALLDFIAPL-----PFGDSDLVEAMRYGAVLGGKRLRPYLVYATG 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F ++ + AAIECIH YSLIHDDLP+MDN +RRG+PT H+++ E AI+AG+ Sbjct: 64 QMFGLSLVNLDAPAAAIECIHAYSLIHDDLPAMDNDDLRRGQPTCHVKFGEANAILAGDA 123 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ + + D R ++ L G+ GM GGQ LD++ E I + Sbjct: 124 LQTLAFSILAEADMSDVADKDRLAMVAELARASGVAGMCGGQALDLEAEARQISLADLEQ 183 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E +G+ FQ+ DD+LD D + Sbjct: 184 IHRHKTGALIRAAVRLGALAAGERGRAALPFLDRYAEAIGLAFQVQDDILDVIGDTATIG 243 Query: 236 KK 237 K+ Sbjct: 244 KR 245 >gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21] gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21] Length = 292 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 11/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 L + L+E S+ +D L + R+ A+ Y AL GGK++R L+ A Sbjct: 3 DLSTYLKERSELVDGFLK-------IRIGVGAISRVDEAMAYSALAGGKRLRPILLMAAA 55 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + +A+E IH YSLIHDDLP MDN RRG+ T H + + A++AG+G Sbjct: 56 DAVGGKGTDFLPLASALEMIHTYSLIHDDLPEMDNDDYRRGRLTNHKVFGQAMAVLAGDG 115 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180 LLT AFE+++ + + + +++ + G +GM+GGQ LDI E ++ ++ + Sbjct: 116 LLTQAFEVMTE-QKGVDPALMVEIIHLIARCAGPEGMVGGQALDINAEEKHLEPAEMKQL 174 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL A SGA++ S++E L F G+ FQ+ DD+LD E D Sbjct: 175 HEAKTGALFIAAIRSGALLGGGSKDEVNALTKFATFFGLAFQITDDILDVEGDSK 229 >gi|300870060|ref|YP_003784931.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli 95/1000] gi|300687759|gb|ADK30430.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli 95/1000] Length = 295 Score = 225 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 83/242 (34%), Positives = 137/242 (56%), Gaps = 14/242 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L + K ID+ ++++ ++ ++ + L ++Y L GGK++R L Sbjct: 1 MN--LKEYMNIRLKDIDSEINNIFKSSSISLE----NNFLDMLKYPLDAGGKRLRPILTC 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LFN ++ A+ ++E IH YSL+HDDLP+MDN +RRGKPT H++Y E AI+ Sbjct: 55 LACELFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILV 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+GLLT++FEI+S+ + D +L+ +++ G+ GM+ GQ +D ++ ID + Sbjct: 115 GDGLLTHSFEILSNAN--VNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEML 172 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234 ++ KTGA++ A GAI + E + +GE +G+ FQ+ DD+LD D L Sbjct: 173 KILHSKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETL 232 Query: 235 PK 236 K Sbjct: 233 GK 234 >gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3] gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3] Length = 295 Score = 225 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 88/234 (37%), Positives = 129/234 (55%), Gaps = 10/234 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + L K ++ LD +L RL SA+R++L GGK++R L A Sbjct: 3 NLETYLARRQKAVNEALDRILADCVP------GGRLFSAMRHSLKAGGKRLRPILCMAAA 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 AL G AIE IH YSL+HDDLP++DN +RRG+P H +DE TAI AG+ Sbjct: 57 EAVGGTWEDALFPGCAIELIHTYSLVHDDLPAIDNDPLRRGQPACHAAFDEATAIFAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L T AFE++SS + + R L+ ++ G GM+ GQM DI Q + Q+ Sbjct: 117 LHTLAFEVLSSDRYIFFQGKRRLALIHLISRATGNHGMIEGQMRDILAQGGNLGLDQLKE 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++KTGAL+ + +GA+ A+ + +L + EN+G+ FQ+ADDLL+ E D Sbjct: 177 LHRLKTGALITASVHAGALTGKATVRQTGKLIEYAENIGLAFQVADDLLNVEGD 230 >gi|71892019|ref|YP_277749.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796125|gb|AAZ40876.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 306 Score = 225 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 89/243 (36%), Positives = 131/243 (53%), Gaps = 13/243 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 ++L+E+ +R+D + L+ Q L+ AIRY+ LLGGK++R FLV + Sbjct: 5 DFANELRESHQRVDEAISRYLIMFLK----QDVSLLMQAIRYSVLLGGKRLRPFLVYQTG 60 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF + AAIECIH YSLIHDDLP MDN +RRG PT H+++ E A++AG+ Sbjct: 61 KLFGIRSSNLNAPAAAIECIHAYSLIHDDLPIMDNDKLRRGHPTCHVKFGESIAVLAGDA 120 Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178 L T AF I+S + D R +++ +L G GM GQ LD ++ I TQ+ Sbjct: 121 LHTLAFTILSEAHMPTITDQDRLKMIATLASASGANGMCLGQSLDLINKNNKNISATQLE 180 Query: 179 MIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEE--DL 234 I + KTG+L+ A GA+ A + + L + +G+ FQ+ DD++D D Sbjct: 181 TIYQYKTGSLIRAAVRIGALAAGNKSCDDVLSFLDHYATTIGLAFQIQDDIIDISHAYDQ 240 Query: 235 PKK 237 KK Sbjct: 241 KKK 243 >gi|85713667|ref|ZP_01044657.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] gi|85699571|gb|EAQ37438.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] Length = 308 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 103/239 (43%), Positives = 145/239 (60%), Gaps = 5/239 (2%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 + +L + + +L+ LL + RL+ A+RY+ L GGK++R FLV E Sbjct: 7 SADFAKRLDSTADETEALLEKLLSDAPLPDEIARPKRLMDAMRYSSLGGGKRLRPFLVVE 66 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H D+ TAI+AG Sbjct: 67 SSAVFGVAREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDATAILAG 126 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQ 176 +GLLT AF+II+ + +R L +L G+ GM+GGQ+LD+ E Sbjct: 127 DGLLTLAFDIITRDEVHQDPTVRLLLTRALARAAGIGGMVGGQLLDLAGEGRFGDRGPVD 186 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 V +Q+MKTGAL+ F C +GA++ ASQ + + L +G LG FQ+ADDLLD E D Sbjct: 187 VARVQQMKTGALLRFGCIAGALLGQASQEDYQALDTYGRALGEAFQIADDLLDVEGDAA 245 >gi|57239293|ref|YP_180429.1| putative geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden] gi|58579257|ref|YP_197469.1| putative geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden] gi|57161372|emb|CAH58295.1| putative geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden] gi|58417883|emb|CAI27087.1| Possible geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden] Length = 276 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 93/237 (39%), Positives = 132/237 (55%), Gaps = 9/237 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M + ++ S+ L ++L + H+D LL++++Y+L GK IR FLV Sbjct: 1 MFYNISHLMENYSRLFTKELYNILPKAD------HDDILLASMKYSLFTPGKYIRPFLVN 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A +FNVN L V AIE IH YSLIHDDLP MDN RRG+ + H ++ E AI+ Sbjct: 55 ASAQIFNVNIDRTLPVSVAIELIHVYSLIHDDLPGMDNEDTRRGQLSSHKKFTEAIAILT 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ LLT AFE++S+ IR +++ LT IG QGM+ GQ+LD + D + Sbjct: 115 GDALLTLAFEVLSTINE--SPYIRCRIIQVLTQAIGYQGMIKGQVLDTETIAKDINDIKT 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +KT L ACE G I+ AS E L+ +G NLG FQ+ DD+ D +D+ K Sbjct: 173 MHTLKTACLFSAACEVGGILGGASDTELNSLKNYGLNLGFAFQIKDDIADICKDISK 229 >gi|222055717|ref|YP_002538079.1| Polyprenyl synthetase [Geobacter sp. FRC-32] gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter sp. FRC-32] Length = 297 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 86/235 (36%), Positives = 129/235 (54%), Gaps = 11/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L S L+E + +D L+ L + L ++RY++ GGK+IR L+ Sbjct: 2 DLKSYLKERCQLVDDALNRFLP-----LADDLPASLHKSMRYSIFAGGKRIRPILMLAAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 N A+ A+E IH YSLIHDDLP+MD+ RRG PT H + E AI+AG+ Sbjct: 57 EAVGGNISQAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDA 116 Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 LLT AF ++S+ + Q++ ++ G +GM+GGQ++D++ E ID V Sbjct: 117 LLTEAFILLSNLAAAPTVPPAALVQVIQEISCCAGSRGMVGGQVVDMESEGNAEIDLATV 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ + +SGA++ AS + E L +GE +G+ FQ+ADD+LD E Sbjct: 177 QYIHTHKTGALIKASVKSGALLGGASSKDAESLTRYGEAIGLAFQIADDILDIEG 231 >gi|197284007|ref|YP_002149879.1| geranyltranstransferase [Proteus mirabilis HI4320] gi|227358123|ref|ZP_03842464.1| geranyltranstransferase [Proteus mirabilis ATCC 29906] gi|194681494|emb|CAR40356.1| geranyltranstransferase [Proteus mirabilis HI4320] gi|227161459|gb|EEI46496.1| geranyltranstransferase [Proteus mirabilis ATCC 29906] Length = 307 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 95/244 (38%), Positives = 129/244 (52%), Gaps = 13/244 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 KL +R+D L+ L + L A+RY ALLGGK++R FLV Sbjct: 8 TDAFRQKLHSAHQRVDEALNQALQTL-----PFSDMPLSQAMRYGALLGGKRLRPFLVYA 62 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +FNV AAIECIH YSLIHDDLP+MDN +RRGKPT HI++ E AI+AG Sbjct: 63 VGEMFNVPVANLDVPAAAIECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILAG 122 Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177 + L T AFEI++ + + R ++ L GL GM GGQ LD +D+ ID + Sbjct: 123 DALQTLAFEILAKNAMPDVAIADRVAMIAELATASGLAGMCGGQALDLDAEDKSIDLVAL 182 Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDC---EED 233 I KTGAL+ A GA+ A + L + ++G+ FQ+ DD+LD E+ Sbjct: 183 EKIHLHKTGALIRAAVRLGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTEE 242 Query: 234 LPKK 237 K+ Sbjct: 243 TGKR 246 >gi|75674693|ref|YP_317114.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255] gi|74419563|gb|ABA03762.1| farnesyl-diphosphate synthase [Nitrobacter winogradskyi Nb-255] Length = 308 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 107/245 (43%), Positives = 147/245 (60%), Gaps = 10/245 (4%) Query: 1 MNGGLPS-----KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIR 54 M GL S +L + + +L+ LL + RL A+RY+ L GGK++R Sbjct: 1 MTSGLSSADFAIRLDTTADETEAVLEKLLSDAPLPDEIARPRRLTDAMRYSSLGGGKRLR 60 Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 FLV E +++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H D+ Sbjct: 61 PFLVVESSAVFGVPREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDA 120 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--- 171 TAI+AG+GLLT AF+II+ + +R L +L G+ GM+GGQ+LD+ E Sbjct: 121 TAILAGDGLLTLAFDIITRDEVHDDPAVRLLLTRALARAAGIGGMVGGQLLDLAGEGRFG 180 Query: 172 -IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 V +Q+MKTGAL+ F C +GA++ ASQ + + L +G LG FQ+ADDLLD Sbjct: 181 DRGPVDVARVQQMKTGALLRFGCIAGALLGQASQKDYQALDAYGRALGEAFQIADDLLDV 240 Query: 231 EEDLP 235 E D Sbjct: 241 ESDAA 245 >gi|148826941|ref|YP_001291694.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittGG] gi|148718183|gb|ABQ99310.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittGG] Length = 296 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 94/238 (39%), Positives = 135/238 (56%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL+A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLNAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG'] Length = 303 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 87/237 (36%), Positives = 137/237 (57%), Gaps = 9/237 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + + L ++ L+ L ++ L ++RY+LL GGK+IR L Sbjct: 8 AIEAYLNRCKYAVEQFLESLFVKELG----TDYGTLAESMRYSLLAGGKRIRPVLAMAAM 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + + + + A +E IH YSLIHDDLPSMD+ +RRGKPT H+ Y + TAI+AG+ Sbjct: 64 EALDRDPIPCIPLLAPLELIHTYSLIHDDLPSMDDDSLRRGKPTNHVIYGDATAILAGDA 123 Query: 123 LLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 LLT+AF ++S P + IR +++ L+ G+ GM+GGQ +DI E ++ + + Sbjct: 124 LLTHAFTLLSDPDYDKLVSFEIRLKIIHELSVGAGINGMVGGQQMDIASEGKALNLSSLE 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + KTGAL+ + GA++ AS ++ ERL +G+ +GI FQ+ADDLLD E D Sbjct: 184 FLHQHKTGALIRASLRIGALLGKASSSDFERLDRYGQAVGIAFQIADDLLDVEGDAA 240 >gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC 7421] gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC 7421] Length = 295 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 84/241 (34%), Positives = 127/241 (52%), Gaps = 13/241 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L + L++ +++ LD L Q Q+ D+L A+RY+LL GGK++R L Sbjct: 3 QFDLDAYLRQCRSQVEAALDRYLPQ-------QYPDKLYEAMRYSLLAGGKRLRPILCLT 55 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + + A+ A+E +H SLIHDDLP+MD+ RRGK T H Y E AI+AG Sbjct: 56 SCRMSGGSADLAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDMAILAG 115 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + LL YAF++I+ + +++ L G++GGQ++D++ E I + Sbjct: 116 DALLAYAFQLIAEKTVGAQPERVVEVLGRLGKAASGAGLVGGQVVDLESEGRTITLETLE 175 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KTGAL+ + SGAI+A A ERL + +G+ FQ+ DDLLD +L Sbjct: 176 YIHTHKTGALLEVSVISGAILAGADGGVVERLTRYSRCIGLAFQIRDDLLDITATQAELG 235 Query: 236 K 236 K Sbjct: 236 K 236 >gi|121601917|ref|YP_988458.1| polyprenyl synthetase [Bartonella bacilliformis KC583] gi|120614094|gb|ABM44695.1| polyprenyl synthetase [Bartonella bacilliformis KC583] Length = 300 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 107/233 (45%), Positives = 147/233 (63%), Gaps = 3/233 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 + L +++ + L+ LL + + LL A+RY L GGK +R F V + Sbjct: 2 HEFTTLLAKHADAVKQRLNMLLNNHVQEGEIARPELLLQAMRYGVLNGGKCLRPFFVIQS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+LF+V AL VG A+ECIHCYSLIHDDLP+MDN +RRGKPTVH +DE TAI+AGN Sbjct: 62 AALFDVPPEHALDVGVALECIHCYSLIHDDLPAMDNDILRRGKPTVHKAFDEATAILAGN 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179 LLT+AFEII+ L R L+ +L GL GM+GGQ+LD++ E D T++ Sbjct: 122 ALLTFAFEIIAHKACALLPQTRLNLITALAQAAGLGGMIGGQILDLEAEKKPQDRTKILT 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q+MKT AL+ F+C++GAIM +AS + ++ FG +G+ FQL DDLLD Sbjct: 182 LQRMKTAALISFSCQAGAIMGNASASITQQFADFGTQIGLAFQLTDDLLDVTS 234 >gi|220929321|ref|YP_002506230.1| polyprenyl synthetase [Clostridium cellulolyticum H10] gi|219999649|gb|ACL76250.1| Polyprenyl synthetase [Clostridium cellulolyticum H10] Length = 294 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 79/220 (35%), Positives = 125/220 (56%), Gaps = 8/220 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 I+ L +++ + + + A+ Y+LL GGK++R L A +F+ + Sbjct: 14 IEERLHNIIPEVDEYCLD-----IEQAMSYSLLAGGKRLRPVLALAVAEMFDKPFDEVIN 68 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 G AIE IH YSLIHDDLP+MDN RRGK T H + E AI+AG+GLL A+EI+ + Sbjct: 69 FGCAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDGLLNMAYEIMIND 128 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFA 192 + ++ + + + G GM+GGQ++D+Q E I+ ++ + ++KTGAL+ Sbjct: 129 AVESRNIEKMRAAGIVAKYAGALGMVGGQVIDLQSEEKTIESDRLKTMHRLKTGALIKAP 188 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 E+ A++ A + E E L + NLG+ FQ+ DD+LD E Sbjct: 189 VEAAAVICGADKKEFELLSGYAANLGLAFQIKDDILDIEG 228 >gi|229844084|ref|ZP_04464225.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 6P18H1] gi|229813078|gb|EEP48766.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 6P18H1] Length = 296 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 94/238 (39%), Positives = 134/238 (56%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|209963898|ref|YP_002296813.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW] gi|209957364|gb|ACI98000.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW] Length = 296 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 103/235 (43%), Positives = 150/235 (63%), Gaps = 8/235 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M L + + + ++++ +D LL + RL A+RY L GGK++R FLV Sbjct: 1 MPKTLTAAMADTVEQVEAAIDVLLPRVDLP-----EARLFEAMRYGCLGGGKRLRPFLVM 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E A LF VN ALR AA+E IHCYSL+HDDLP+MD+ +RRG+PT+H++YDE TAI+A Sbjct: 56 ESARLFGVNPACALRAAAAVEFIHCYSLVHDDLPAMDDSDLRRGRPTLHLEYDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ LLT AFEI++ P+T +R +L+ +L G +GM+GGQMLD +D D + Sbjct: 116 GDALLTVAFEILADPETHEDAQVRCRLVSALAKAAGPRGMVGGQMLDLMAEDRTFDIGAI 175 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q++KTG L+ F+ +GAI+ AS + L+ + +LG+ FQ+ADDLLD E Sbjct: 176 TRLQRLKTGELIAFSATAGAILGRASPPQHHALQAYAHDLGLAFQIADDLLDVEG 230 >gi|309973121|gb|ADO96322.1| Geranyltranstransferase [Haemophilus influenzae R2846] Length = 296 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 134/238 (56%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQSLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|311030982|ref|ZP_07709072.1| Polyprenyl synthetase [Bacillus sp. m3-13] Length = 298 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 82/237 (34%), Positives = 128/237 (54%), Gaps = 10/237 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + +++ K ++ L + + + LL ++ Y+L GGK++R LV Sbjct: 6 DLQTFMKDRKKLVEDALFSYMN------AVEAPEVLLESMNYSLKAGGKRLRPLLVLATL 59 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + V A+E IH YSL+HDDLPSMD+ RRGKPT H + E AI+AG+ Sbjct: 60 KSFGKPEELGMPVACAVEMIHTYSLVHDDLPSMDDDDFRRGKPTNHKVFGEAMAILAGDA 119 Query: 123 LLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT++FE++ +K LM L G GM+GGQ+ D++ E + + Sbjct: 120 LLTHSFEVMEDLLNFDVKPMKVVTLMKELAKAAGPTGMVGGQVADMEGEGAQLSLQDLEY 179 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTG L+ F+ +GAI+ A++ + +L F ++LG+ FQ+ DD+LD E D K Sbjct: 180 IHRNKTGKLLGFSIVAGAILGDATEEQISKLEQFADHLGLAFQIRDDILDIEGDAAK 236 >gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91] gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91] Length = 297 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 9/236 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ E I++ L+ L T RL A+RYA+L GGK++R L Sbjct: 1 MHPDFQLWTTERLALIESFLEQNLPATNCA-----PARLHEAMRYAVLNGGKRVRPLLSF 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L + + AA+E IH YSL+HDDLP MDN +RRGKPT HI+Y E TA++ Sbjct: 56 AAGELSGADKTQVIAASAAVELIHAYSLVHDDLPCMDNDILRRGKPTCHIRYGEPTALLV 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177 G+ L + AF++++ + +++ L G +GM GGQ LD + + ++ Sbjct: 116 GDSLQSLAFQLLAESALTEDPRTQLEMIRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPEL 175 Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA ++++ ++L F + +G+ FQ+ DD+LD E Sbjct: 176 EFMHIHKTGALIRAAVILGARCGSRLNEDQFKQLDHFAKCIGLAFQVVDDILDAEA 231 >gi|237737790|ref|ZP_04568271.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229419670|gb|EEO34717.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 300 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 75/234 (32%), Positives = 121/234 (51%), Gaps = 9/234 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L K ++ +D L + + + + ++YA+L GGK++R L+ Sbjct: 8 FKEYLGMGKKLVEDGIDKYLGEL------TYPEVIAEGMKYAVLNGGKRLRPILLFMTLD 61 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + L +AIE IH YSL+HDDLP++DN RRGK T H ++ E I+ G+ L Sbjct: 62 ILGCEREKGLATASAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDAL 121 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT+AF +++ + L +++ + G+ GM+GGQM+DI E ID + + Sbjct: 122 LTHAFYVLTEKNSHLSAEKIVEIVKLTSSYAGINGMIGGQMVDIASEGKKIDLETLRYMH 181 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTG L+ E ++A AS ++E L + E +G+ FQ+ DD+LD E D Sbjct: 182 AHKTGKLIKLPVEVACVIADASIEDREVLTKYSELIGLAFQIKDDILDIEGDFE 235 >gi|319776299|ref|YP_004138787.1| geranyltranstransferase [Haemophilus influenzae F3047] gi|317450890|emb|CBY87115.1| geranyltranstransferase [Haemophilus influenzae F3047] Length = 296 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 137/238 (57%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ L SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLETQLEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYTT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAGKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L + G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALVQILAKSSGIQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + A + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAETIGLAFQVQDDILDIEGDSA 233 >gi|56551751|ref|YP_162590.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|241762408|ref|ZP_04760487.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56543325|gb|AAV89479.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|241373095|gb|EER62744.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 298 Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 97/240 (40%), Positives = 148/240 (61%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M L + +++ ++ ID + + L + RL+ A+RYA + GGK++R LV Sbjct: 1 MAVNLKTMMEQVAQDIDRLFAEQLP-----VPEDPRRRLVEAMRYAAIGGGKRLRPLLVV 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +LFNV+ ALRVG AIECIH YSLIHDD+P MDN +RRGKPTVH +D+ +A+++ Sbjct: 56 ATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLS 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175 G+ L AFEI+S K ++R +L+ +L G GM+GGQ +D+ E D Sbjct: 116 GDALQALAFEILSEEKIHTDPHVRLELIQALAIASGKDGMVGGQAIDLAAETSTVPFDLP 175 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +Q++KTGAL F E+GAIM +++ ++RL+ + ++G+ FQ+ADDL+D E D Sbjct: 176 TITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEA 235 >gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753] gi|156866965|gb|EDO60337.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753] Length = 293 Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 80/228 (35%), Positives = 121/228 (53%), Gaps = 10/228 (4%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69 + RI+ L L + ++ A+ Y+LL GGK+IR L E + + Sbjct: 6 QYLSRIEEALASYLP-----AKDCLQKDVIEAMEYSLLAGGKRIRPTLTLEFCRVCGGDV 60 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A+ A+E IH YSLIHDDLP MDN +RRG+P HIQY E A++AG+GLLT AFE Sbjct: 61 QAAMPFACAVEMIHSYSLIHDDLPCMDNSDLRRGRPANHIQYGEDIALLAGDGLLTLAFE 120 Query: 130 IISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185 SP++ ++ L G +GM+GGQ++D +++ + + + KT Sbjct: 121 TALSPESIKLAGAQRGAEAARLLAKAAGAEGMVGGQVIDLQHENQRAPIEVLLEMDRKKT 180 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ A + G +A A Q ++E + +G+ FQ+ DD+LD D Sbjct: 181 GALIQAAAQMGCAVAGADQKQREAAVEYAACVGLAFQIRDDILDVISD 228 >gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113] gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113] Length = 296 Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 122/234 (52%), Gaps = 9/234 (3%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64 + R++ L+ L + RL A+RYA+LGG K++R L Sbjct: 5 EDWVNALQARVEQALEKTLPPASKP-----PKRLHEAMRYAVLGGGKRLRPLLTYSAGMA 59 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 V +A+E IH YSL+HDDLPSMDN +RRG+PT H + E TA++AG+ L Sbjct: 60 VGVAEAALDAPASAVELIHAYSLVHDDLPSMDNDDLRRGQPTCHKAFGETTALLAGDALQ 119 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQK 182 AF I++ P + + + ++ L G +GM GGQ +D+ I +++ + + Sbjct: 120 ALAFRILAEPASTIPAENQINMLKLLAEAAGSRGMAGGQAIDLDSVGIQLTLSEMETMHR 179 Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +KTGAL+ + GA A +Q+ E+L F + +G+ FQ+ DD+LD E D Sbjct: 180 LKTGALIRASVLLGAWCQPAITQDTIEKLDHFAQCIGLAFQIQDDVLDVESDTA 233 >gi|19704662|ref|NP_604224.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714968|gb|AAL95523.1| Dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 297 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 86/243 (35%), Positives = 131/243 (53%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN L+E + +T L L + + + + + + YA L GGK++R FL+ Sbjct: 1 MN-DFQVYLKEKTDFFETELKKELKELS------YPETIAKGMEYAILNGGKRLRPFLLF 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ Sbjct: 54 VTLELLNENINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176 G+ LLTYAF ++S +L + + ++S T G+ GM+GGQM+DIQ E ID Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGIDGMIGGQMIDIQSENKKIDLET 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + I KTG L+ E I+A+ ++++E L + + +G+ FQ+ DD+LD E D Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANLEKDKREVLEEYADLIGLAFQVKDDILDVEGTFED 233 Query: 234 LPK 236 L K Sbjct: 234 LGK 236 >gi|90961512|ref|YP_535428.1| geranyltranstransferase [Lactobacillus salivarius UCC118] gi|90820706|gb|ABD99345.1| Geranyltranstransferase [Lactobacillus salivarius UCC118] Length = 297 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 122/205 (59%), Gaps = 6/205 (2%) Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDL 92 N L ++RY++ GGK+IR LV A + +V ++E +H YSLIHDDL Sbjct: 30 SNQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDL 89 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT H ++ + A++AG+GLLT +FE +S T + ++ + +L+ L Sbjct: 90 PEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLS--LTDIDNDKKIKLISQLAL 147 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G QGM+ GQ DI E + ++ + KTGAL+ +AC +G I++ AS N+ E L Sbjct: 148 AAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELL 207 Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235 R +GEN G+ FQ+ DDLLD D Sbjct: 208 RKYGENFGLAFQIYDDLLDVIGDAK 232 >gi|294785112|ref|ZP_06750400.1| geranyltranstransferase [Fusobacterium sp. 3_1_27] gi|294486826|gb|EFG34188.1| geranyltranstransferase [Fusobacterium sp. 3_1_27] Length = 297 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 83/243 (34%), Positives = 130/243 (53%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN L+E + +T L L + + + + + + YA L GGK++R FL+ Sbjct: 1 MN-DFQVYLKEKTDFFETELKKELKELS------YPEIIAKGMEYATLNGGKRLRPFLLF 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ Sbjct: 54 ATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176 G+ LLTYAF ++S +L + + ++S T G+ GM+GGQM+DI+ E I Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIGLET 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + I KTG L+ E I+A+ +++++ L + + +G+ FQ+ DD+LD E D Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFED 233 Query: 234 LPK 236 L K Sbjct: 234 LGK 236 >gi|301156308|emb|CBW15779.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1] Length = 297 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 87/237 (36%), Positives = 135/237 (56%), Gaps = 11/237 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M+ ++L++ RI+ L + + S +N L A++Y LLGGK++R FLV Sbjct: 1 MSYQFGTELKQVQDRINQFLANQFEEIDS-----YNAPLRDAMKYGLLLGGKRVRPFLVY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AAIE IH YSLIHDDLP+MDN +RRG+PT HI +DE TAI+A Sbjct: 56 ATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLPAMDNDELRRGQPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ L +AFEI++ + L + QL+ L G+QGM GQ LD+ E ++ ++ Sbjct: 116 GDALQAFAFEILTEAPS-LSAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +I + KTGAL+ A + G I + ++ +++L + + +G+ FQ+ DD+LD E Sbjct: 175 ELIHRNKTGALLTAALKLGFICSPHFENKELEQQLERYSQAIGLAFQVQDDILDIEG 231 >gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001] gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001] Length = 321 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 P+ L+ R++ LD + + + + L A+RY+LL GGK++R L Sbjct: 28 FDFPAYLEAARLRVEAALD-------AALGPERPESLREAMRYSLLAGGKRLRPILCLAA 80 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+ Sbjct: 81 CELAGGESERAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEANAILAGD 140 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179 LLT AFE+++ + + ++ L+ G G++GGQ++D + + +D + Sbjct: 141 ALLTRAFEMVALRSSGVPPERLLAVVGELSLASGAPGLVGGQVVDLECEGKTVDLDTLEY 200 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ GA++A A LR + +G+ FQ+ DD+LD Sbjct: 201 IHLHKTGALLRACVLCGALIAGAPDALLTALRTYARGIGLAFQIIDDILDVTA 253 >gi|254994133|ref|ZP_05276323.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL J2-064] Length = 233 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 ++ ++D+ L + S + RL ++ Y++ GGK+IR LV VN L Sbjct: 7 FLEQYKKVIDESLFKEISERNIE--PRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I Sbjct: 65 LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 ++ + L R L+ ++ + G +GM+GGQ+ D++ E + ++ I KTG L Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + FA S A +A A + +RLR F EN+GI FQ++DD+LD D K Sbjct: 184 LIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|237742320|ref|ZP_04572801.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13] gi|229429968|gb|EEO40180.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13] Length = 297 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 82/243 (33%), Positives = 129/243 (53%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN L+E + +T L L + + + + + + YA L GGK++R FL+ Sbjct: 1 MN-DFQVYLKEKTDFFETELKRELKELS------YPETIAKGMEYATLNGGKRLRPFLLF 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ Sbjct: 54 ATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176 G+ LLTYAF ++S + + + ++S T G+ GM+GGQM+DI+ E I Sbjct: 114 GDSLLTYAFYVLSQKNLEFLSSEQLVNIISKTSEYAGINGMIGGQMIDIESENKKIGLET 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + I KTG L+ E I+A+ +++++ L + + +G+ FQ+ DD+LD E D Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFED 233 Query: 234 LPK 236 L K Sbjct: 234 LGK 236 >gi|320157198|ref|YP_004189577.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio vulnificus MO6-24/O] gi|319932510|gb|ADV87374.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O] Length = 294 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 124/240 (51%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L S Q N+++++ LD L N L+ A+RY L LGGK+ R FLV Sbjct: 1 MIDVLASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + +AIECIH YSLIHDDLP+MD+ +RRG+PT H+++DE TAI+ Sbjct: 52 ATGEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD ++ + + Sbjct: 112 GDALQTLAFTILAEGTLSPDGETQRVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A GA+ A +L + +G+ FQ+ DD+LD D Sbjct: 172 LEEIHRNKTGALIRCAVRLGALAAGEKGLAILPQLEKYSTAIGLAFQVQDDILDIISDTE 231 >gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus coahuilensis m4-4] Length = 294 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 84/239 (35%), Positives = 134/239 (56%), Gaps = 10/239 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L S + E I+D L++ ++ L ++ Y++ GGK+IR L+ Sbjct: 1 MTTNLRSFMTEYK----AIIDKELVEQIDYLSI--PTSLKESMIYSVSAGGKRIRPVLLL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + ++ A+E +H YSLIHDDLPSMD+ +RRGKPT H + E TAI+A Sbjct: 55 ATIEAFGKSPALGIKAAVALEMVHTYSLIHDDLPSMDDDDLRRGKPTNHKVFGEATAILA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLTY+FE+I+S K + + +L+ G +GM+GGQ+ D++ E + ++ Sbjct: 115 GDALLTYSFEVIASMK-DILPQTKIELVRLFAKAAGPEGMVGGQVADMEGERKTLTLEEL 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTG L+ +A +GAI+ AS+ E + + E++G+ FQ+ DD+LD E K Sbjct: 174 EYIHRNKTGKLLQYAVVAGAIIGGASKEEVRLYKEYAEHIGLAFQIKDDILDIEGTEDK 232 >gi|37679053|ref|NP_933662.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] gi|37197795|dbj|BAC93633.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] Length = 298 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 124/240 (51%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L S Q N+++++ LD L N L+ A+RY L LGGK+ R FLV Sbjct: 5 MIDVLASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + +AIECIH YSLIHDDLP+MD+ +RRG+PT H+++DE TAI+ Sbjct: 56 ATGEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILT 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD ++ + + Sbjct: 116 GDALQTLAFTILAEGTLSPDGETQRVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEE 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A GA+ A +L F +G+ FQ+ DD+LD D Sbjct: 176 LEEIHRNKTGALIRCAVRLGALAAGEKGLAILPQLEKFSTAIGLAFQVQDDILDIISDTE 235 >gi|254302823|ref|ZP_04970181.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323015|gb|EDK88265.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 297 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 127/240 (52%), Gaps = 13/240 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 L+E + +T L L + + + + + + YA L GGK++R FL+ Sbjct: 3 DFQVYLKEKTSFFETELKKELQELS------YPETIAKGMEYAILNGGKRLRPFLLFATL 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ G+ Sbjct: 57 ELLNQNIEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDS 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAF I+S + + + ++S T G+ GM+GGQM+DI+ E ID + Sbjct: 117 LLTYAFYILSQKNLKFLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKY 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 I KTG L+ E I+A+ +++KE L + +G+ FQ+ DD+LD E +L K Sbjct: 177 IHSHKTGKLIKLPIEIACIIANVEKDKKEVLEEYANLIGLAFQVKDDILDVEGTFEELGK 236 >gi|316931945|ref|YP_004106927.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1] gi|315599659|gb|ADU42194.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1] Length = 308 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 102/237 (43%), Positives = 144/237 (60%), Gaps = 5/237 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 +L ++ + +L LL + RL+ AIRY+ L GGK++R FL E A Sbjct: 9 DFAKRLDSTAEDTEALLGRLLSDELMTDEIARPRRLMEAIRYSTLGGGKRLRPFLAVESA 68 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F ++ AL VGAA+ECIHCYSLIHDDLP+MD+ +RRG+PT+H YD+ TAI+AG+ Sbjct: 69 AVFGIDRDAALLVGAALECIHCYSLIHDDLPAMDDSDLRRGRPTLHKAYDDATAILAGDA 128 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178 LLT+AF+I++ + +R L L GL GM+GGQMLD+ E + V Sbjct: 129 LLTFAFDIVTRDEVHTDPTVRLMLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVA 188 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q+MKTGAL+ + C +GAI+ A+ + L +G LG FQ+ADDLLD E D Sbjct: 189 KLQQMKTGALLRYGCVAGAILGQANAEQYRALDDYGRALGEAFQIADDLLDVESDAE 245 >gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] Length = 297 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 80/236 (33%), Positives = 126/236 (53%), Gaps = 9/236 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 M+ S E ++T L+ L +T RL A+RY++LGG K++R L Sbjct: 1 MHPDFQSWASEQLALVETCLEKHLPETNCA-----PARLHDAMRYSVLGGGKRVRPLLSF 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L + A GAA+E IH YSL+HDDLP MDN +RRGKPT H++YDE TA++ Sbjct: 56 AAGELSGADKTHATIAGAAVELIHVYSLVHDDLPCMDNDTLRRGKPTCHVRYDEPTALLV 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177 G+ L + AF++++ +++ +++ L G +GM GGQ LD + + ++ Sbjct: 116 GDSLQSLAFQLLTETNLTEDPHVQLEMVRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPEL 175 Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA + + + + L F + +G+ FQ+ DD+LD E Sbjct: 176 EFMHIHKTGALIRAAVILGARCGNRLDETQFKLLDHFAKCMGLAFQVIDDILDTEA 231 >gi|170021207|ref|YP_001726161.1| geranyltranstransferase [Escherichia coli ATCC 8739] gi|169756135|gb|ACA78834.1| Polyprenyl synthetase [Escherichia coli ATCC 8739] Length = 299 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MDN +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|257125255|ref|YP_003163369.1| polyprenyl synthetase [Leptotrichia buccalis C-1013-b] gi|257049194|gb|ACV38378.1| Polyprenyl synthetase [Leptotrichia buccalis C-1013-b] Length = 296 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 86/243 (35%), Positives = 138/243 (56%), Gaps = 15/243 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L L++ K ++ L +LL + + ++ ++L A+ YA++ GGK+IR L+ Sbjct: 2 LREYLEDKKKIVEGNLKELL----GNYENKYPEKLSEAMEYAVMNGGKRIRPILMYMICD 57 Query: 64 LFNVN----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF N + + AA+E IHCYSL+HDDLP+MDN RRGK TVH +Y+E ++ Sbjct: 58 LFEKNNCKSYDKIKEIAAALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGVLV 117 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLT AF II++ K+ L D + +++ L+ G GM+GGQ +D++ E ++ + Sbjct: 118 GDVLLTEAFGIIANSKS-LGDKNKIEIISKLSEYAGFFGMVGGQFVDMESENKKVEIDTL 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234 I KTG L+ A E I ++E++ + + LGI FQ+ DD+LD E ++ Sbjct: 177 KYIHAHKTGKLLTAAIELPMIALDIESEKREKMVEYSKLLGIAFQIKDDILDIEGNFEEI 236 Query: 235 PKK 237 KK Sbjct: 237 GKK 239 >gi|319425679|gb|ADV53753.1| Polyprenyl synthetase [Shewanella putrefaciens 200] Length = 293 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 134/238 (56%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S +QE R+DT L +L +A++Y ALLGGK+IR FLV Sbjct: 2 LASTIQEYQLRVDTQLKQRFSTLE-----DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 T AFEI++ + ++ +L G +GM GGQ +D D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 MKTGAL+ A E I A+A +++ + + F +G+ FQ+ DD+LD E+L K Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMTFAHAVGLAFQVQDDILDIIATTEELGK 234 >gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102] gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102] Length = 309 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L + ++ LD L+ + + L A+RY+LL GGK++R L Sbjct: 18 FDFKAYLAKAKATVEQALDQSLV-------PERPESLREAMRYSLLAGGKRLRPILCLAA 70 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+ Sbjct: 71 CELAGGDAAQAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGD 130 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE+++ + +++ L+ G G++GGQ++D++ E +D + Sbjct: 131 ALLTRAFEMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEY 190 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ +GA++ A LR + +G+ FQ+ DD+LD Sbjct: 191 IHLHKTGALLSACVITGAMIGGADDELIAALRVYARGIGLAFQIIDDILDITA 243 >gi|146292379|ref|YP_001182803.1| polyprenyl synthetase [Shewanella putrefaciens CN-32] gi|145564069|gb|ABP75004.1| farnesyl-diphosphate synthase [Shewanella putrefaciens CN-32] Length = 293 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 135/238 (56%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S +QE R+DT L +L +A++Y ALLGGK+IR FLV Sbjct: 2 LASTIQEYQLRVDTQLKQRFSTLE-----DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 T AFEI++ + + ++ +L G +GM GGQ +D D+ ID + + Sbjct: 117 QTLAFEIVTEAVSGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 MKTGAL+ A E I A+A +++ + + F +G+ FQ+ DD+LD E+L K Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMTFAHAVGLAFQVQDDILDIIATTEELGK 234 >gi|126653065|ref|ZP_01725200.1| YqiD [Bacillus sp. B14905] gi|126590166|gb|EAZ84290.1| YqiD [Bacillus sp. B14905] Length = 293 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 91/242 (37%), Positives = 141/242 (58%), Gaps = 14/242 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L ++ N +I+ + L+ + + + L ++ Y+L GGK+IR V Sbjct: 1 MNEPLKYFIESNIPQIEETMFALVSKIDAPVD------LKDSMLYSLKAGGKRIRPLFVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L+ N L VG+ IE IH YSLIHDDLPSMDN RRGKPT H Y E A +A Sbjct: 55 AVLELYQKNLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 G+ L T AF I++ + ++ R +L+ L+ G +GM+GGQ+LD++ E +D T++ Sbjct: 115 GDALNTLAFGILA--RMEVTAEKRIELVQLLSVAAGAEGMVGGQVLDMEGEQRQLDLTEL 172 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234 + KTGAL+ F+ E+GA++A AS+ ++ L+ + ++G+ FQ+ DD+LD E +L Sbjct: 173 EQVHVNKTGALLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEEL 232 Query: 235 PK 236 K Sbjct: 233 GK 234 >gi|145638945|ref|ZP_01794553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittII] gi|145271917|gb|EDK11826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittII] gi|309750914|gb|ADO80898.1| Geranyltranstransferase [Haemophilus influenzae R2866] Length = 296 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 94/238 (39%), Positives = 134/238 (56%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|256027758|ref|ZP_05441592.1| dimethylallyltransferase [Fusobacterium sp. D11] gi|289765715|ref|ZP_06525093.1| dimethylallyltransferase [Fusobacterium sp. D11] gi|289717270|gb|EFD81282.1| dimethylallyltransferase [Fusobacterium sp. D11] Length = 297 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 86/243 (35%), Positives = 131/243 (53%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN L+E + +T L L + + + + + + YA L GGK++R FL+ Sbjct: 1 MN-DFQVYLKEKTDFFETELKKELKELS------YPETIAKGMEYAILNGGKRLRPFLLF 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ Sbjct: 54 VILELLNENINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176 G+ LLTYAF ++S +L + + ++S T G+ GM+GGQM+DI+ E ID Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLET 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + I KTG L+ E I+A+ +++KE L + + +G+ FQ+ DD+LD E D Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANVEKDKKEVLEEYADLIGLAFQVKDDILDVEGTFED 233 Query: 234 LPK 236 L K Sbjct: 234 LGK 236 >gi|288574875|ref|ZP_06393232.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570616|gb|EFC92173.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 300 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 127/233 (54%), Gaps = 8/233 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L +L++ + + ++D + R+ A+ Y+L +GGK++R L A Sbjct: 7 LKRELKDKKEIFERYMEDWV----GSRPEGVPPRMWDAMVYSLKVGGKRLRPVLCMAAAE 62 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L L + A+E +H SLIHDDLP+MD+ +RRG+PT H+ Y E AI+AG+ L Sbjct: 63 LLGGRSDLVLPMALALEMVHTASLIHDDLPAMDDDVLRRGQPTNHVVYGEALAILAGDAL 122 Query: 124 LTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MI 180 L AFE+ ++ +++ + + +IG G+ GGQ+LD++ E +E I Sbjct: 123 LCQAFELPLTELPSEIPRGNVVKAVAHFARSIGPGGICGGQVLDMESEGSEEECSSPTEI 182 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +KT AL+ + +GAI++ S + E L +G LG+ FQ+ADD+LD + D Sbjct: 183 STLKTAALIRTSLITGAILSGGSAEDLEALESYGLELGVAFQIADDILDVKGD 235 >gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus Ellin6076] gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus Ellin6076] Length = 298 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 82/233 (35%), Positives = 131/233 (56%), Gaps = 11/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L L + + +D+ LD L+ ++ + + A+RY+L GGK+IR L E A Sbjct: 7 DLRDYLAQQQRLVDSELDRLVPP-----ESAAPETIHRAMRYSLFAGGKRIRPILCIEAA 61 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + ++E IH YSLIHDDLP++DN RRGK T H + + AI+AG+ Sbjct: 62 RTVSDDCAGVAAAACSLELIHTYSLIHDDLPALDNDDYRRGKLTNHKVFGDAMAILAGDS 121 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQ--VFM 179 LLT AF++++ D +++L+ L G + GM+GGQ+ D++ E + Sbjct: 122 LLTLAFQVLAQLDA--PDARKTRLIAELATASGTVGGMIGGQVADLEGEGKPPDAQLLET 179 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I + KTGAL+ + GAI A A++ + E L C+G+++G+ FQ+ DD+LD EE Sbjct: 180 IHRAKTGALLRASLRLGAIFAGAAEPQYEALSCYGQHVGLAFQIVDDILDVEE 232 >gi|27363789|ref|NP_759317.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] gi|27359906|gb|AAO08844.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] Length = 298 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 124/240 (51%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L S Q N+++++ LD L N L+ A+RY L LGGK+ R FLV Sbjct: 5 MIDVLASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + +AIECIH YSLIHDDLP+MD+ +RRG+PT H+++DE TAI+ Sbjct: 56 ATGEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILT 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD ++ + + Sbjct: 116 GDALQTLAFTILAEGTLSADGETQRVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEE 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A GA+ A +L + +G+ FQ+ DD+LD D Sbjct: 176 LEEIHRNKTGALIRCAVRLGALAAGEKGLAILPQLEKYSTAIGLAFQVQDDILDIISDTE 235 >gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18] gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29] gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28] gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28] gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29] gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18] Length = 296 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 136/236 (57%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+I ++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +GAI+++A++ ++E+L F +N+G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVEG 230 >gi|260752677|ref|YP_003225570.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552040|gb|ACV74986.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 298 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 97/240 (40%), Positives = 148/240 (61%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M L + +++ ++ ID + + L + RL+ A+RYA + GGK++R LV Sbjct: 1 MAVNLKTMMEQVAQDIDRLFAEQLP-----VPEDPRRRLVEAMRYAAIGGGKRLRPLLVA 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +LFNV+ ALRVG AIECIH YSLIHDD+P MDN +RRGKPTVH +D+ +A+++ Sbjct: 56 ATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLS 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175 G+ L AFEI+S K ++R +L+ +L G GM+GGQ +D+ E D Sbjct: 116 GDALQALAFEILSEEKIHTDPHVRLELIQALAIASGKDGMVGGQAIDLAAETSTVPFDLP 175 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +Q++KTGAL F E+GAIM +++ ++RL+ + ++G+ FQ+ADDL+D E D Sbjct: 176 TITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEA 235 >gi|153802298|ref|ZP_01956884.1| geranyltranstransferase [Vibrio cholerae MZO-3] gi|124122180|gb|EAY40923.1| geranyltranstransferase [Vibrio cholerae MZO-3] Length = 294 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 90/240 (37%), Positives = 126/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R ++ +L G+QGM GQ LD+ E I + Sbjct: 112 GDALQTLAFTILAEGDLSAAGETQRVAMIQALAEASGVQGMCLGQALDLAAENRLISLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|14590908|ref|NP_142981.1| geranylgeranyl pyrophosphate synthetase [Pyrococcus horikoshii OT3] gi|90108478|pdb|1WY0|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthetase From Pyrococcus Horikoshii Ot3 gi|3257488|dbj|BAA30171.1| 342aa long hypothetical geranylgeranyl pyrophosphate synthetase [Pyrococcus horikoshii OT3] Length = 342 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 17/238 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61 L ++++E +K ID + +L+ + + L A R Y L GGK++R F+V Sbjct: 5 EELFARIKEKAKLIDEKIFELIPEKDPRV-------LYEAARHYPLAGGKRVRPFVVLTS 57 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + L A+ AIE IH YSL+HDD+ MD RRGKPTVH + AI+AG+ Sbjct: 58 TEAVGGDPLRAIYPAVAIELIHNYSLVHDDIMDMDE--TRRGKPTVHRIWGVNMAILAGD 115 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178 L + AFE ++ + + R ++ N + GQ D++ E + + Sbjct: 116 LLFSKAFEAVARAEIPPEKKARVLEVIVKASN----ELCEGQARDLEFEKKSTVTIEEYM 171 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL + + G I+ ++ + L +G N+GI FQ+ DD+LD D K Sbjct: 172 EMISGKTGALFEASAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLDLIADEKK 229 >gi|238924568|ref|YP_002938084.1| geranyltranstransferase [Eubacterium rectale ATCC 33656] gi|238876243|gb|ACR75950.1| geranyltranstransferase [Eubacterium rectale ATCC 33656] Length = 307 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 124/237 (52%), Gaps = 12/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 +LQ+ + I+ +L+ L ++ + A+ Y++ GGK++R L+ E Sbjct: 10 SQFMEELQQKVEHINNVLEKFLP-----VEEGQQRIIFEAMNYSVRAGGKRLRPILMEET 64 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +F + AAIE IH YSL+HDDLP+MDN RRGK T H Y E I+AG+ Sbjct: 65 YHMFGGSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGD 124 Query: 122 GLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-----FIDET 175 LL A+E + ++ D ++ L G+ GM+GGQ++D++ E I Sbjct: 125 ALLNLAYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITRE 184 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ I ++KTGAL+ + GAI+A AS +E R+ LG+ FQ+ DD+LD Sbjct: 185 KLDFIYRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTS 241 >gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 299 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 121/237 (51%), Gaps = 10/237 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 + + R++ LD + +T H RL A+RY AL GGK++R LV Sbjct: 5 NMEQHISALRARLEQALDRWIP-----AETTHPARLHEAMRYSALGGGKRVRPVLVYGAG 59 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 V A+E IH YSLIHDDLP+MDN +RRGKPT H +DE AI+AG+ Sbjct: 60 QALGVAPERLDGPACAVELIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEAMAILAGDA 119 Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179 + AF+I+S P R ++M +L G +GM GGQ +D + +D Q+ Sbjct: 120 MQALAFQILSMDPDMLDDPARRLRMMETLARAAGSRGMAGGQAIDLGSVGKQLDIAQLED 179 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ + GA+ A + E L F + +G+ FQ+ DD+LD E D Sbjct: 180 MHVHKTGALIRASVLLGALSAPEVDKAHLENLDRFAKCVGLAFQIRDDILDVEGDTA 236 >gi|94500549|ref|ZP_01307080.1| Polyprenyl synthetase [Oceanobacter sp. RED65] gi|94427339|gb|EAT12318.1| Polyprenyl synthetase [Oceanobacter sp. RED65] Length = 294 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 125/213 (58%), Gaps = 3/213 (1%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82 +L+ + RL A+ Y+LL GGK++R +V + + A + A+E I Sbjct: 17 ILKADYVLPNVDAQRLKDAMTYSLLNGGKRVRPLMVYATTRSLSGDLQAADQCALAVEMI 76 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H YSL+HDDLP+MD+ +RRG+PT HI +DE TAI+AG+ L T AF+++ P + Sbjct: 77 HAYSLVHDDLPAMDDDELRRGQPTCHIAFDEATAILAGDALQTQAFQVLVQPIDGMAPQQ 136 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 + +++ +L H GL GM GGQ LD++ D+ +D + + KTGAL+ + + G + A Sbjct: 137 QLRMVQTLAHASGLAGMAGGQSLDLEAVDKQVDIEYLQNMHLHKTGALIEASVKLGGLCA 196 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +AS+ + L + + +G+ FQ+ DD+LD D Sbjct: 197 NASEQQLSYLSVYAQAIGLAFQVQDDILDVISD 229 >gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605] gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605] Length = 296 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L + ++++ LD + + + L A+RY+LL GGK++R L Sbjct: 5 FDFKAYLGKAKEQVEAALD-------GSLGPERPESLREAMRYSLLAGGKRLRPILCLAA 57 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L AL A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+ Sbjct: 58 CELAGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGD 117 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE+++ + +++ L+ G G++GGQ++D++ E +D + Sbjct: 118 ALLTRAFEMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEY 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ +GA++ A + + LR + +G+ FQ+ DD+LD Sbjct: 178 IHLHKTGALLSACVITGAMIGGADEALIKALRTYARGIGLAFQIIDDILDITA 230 >gi|256845599|ref|ZP_05551057.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2] gi|256719158|gb|EEU32713.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2] Length = 297 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 127/240 (52%), Gaps = 13/240 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 L+E + +T L L + + + + + + YA L GGK++R FL+ Sbjct: 3 DFQVYLKEKTDFFETELKKELKELS------YPETIAKGMEYAILNGGKRLRPFLLFATL 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ G+ Sbjct: 57 ELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDS 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAF ++S + + + ++S T G+ GM+GGQM+DI+ E I + Sbjct: 117 LLTYAFYVLSQKNLEFLSSEQLVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKY 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 I KTG L+ E I+A+ +++++ L + + +G+ FQ+ DD+LD E DL K Sbjct: 177 IHSHKTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDIEGTFEDLGK 236 >gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis thaliana] Length = 306 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 80/226 (35%), Positives = 124/226 (54%), Gaps = 10/226 (4%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 D+ + S + + A+RY+LL GGK++R L L + TA+ A+ Sbjct: 21 DNSISSVKSLKKRTEPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAV 80 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ LL AFE ++ + L Sbjct: 81 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLV 140 Query: 140 DNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ETQVFMIQKMKTGALMCFAC 193 + R + ++ L IG +G++ GQ++D+ E ++ ++ I KT AL+ A Sbjct: 141 ASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAA 200 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 GAIM ++ E E+LR + +G++FQ+ DD+LD E+L K Sbjct: 201 VIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGK 246 >gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109] gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109] Length = 296 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L + +R++ LD + + + L A+RY+LL GGK++R L Sbjct: 5 FDFKAYLGKAKERVEAALD-------GSLGPERPESLREAMRYSLLAGGKRLRPILCLAA 57 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L AL A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+ Sbjct: 58 CELAGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGD 117 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE+++ + +++ L+ G G++GGQ++D++ E +D + Sbjct: 118 ALLTRAFEMVALRSPDVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEY 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ +GAI+ A + + LR + +G+ FQ+ DD+LD Sbjct: 178 IHLHKTGALLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDILDITA 230 >gi|254173046|ref|ZP_04879720.1| bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sp. AM4] gi|214033202|gb|EEB74030.1| bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sp. AM4] Length = 343 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 81/237 (34%), Positives = 121/237 (51%), Gaps = 17/237 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECA 62 L ++++ +K +D I+ +L+ + +L A R Y L GGK++R F+V A Sbjct: 6 ELFTRIKNLAKDVDKIILELVPEKD-------PKKLYEAARHYPLAGGKRVRPFVVLRAA 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + AL AA+E IH YSL+HDD+ MD +RRG+PTVH + AI+AG+ Sbjct: 59 EAVGGDPEKALYPAAAVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGVNMAILAGDL 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFM 179 L + AFE I+ + + R +L T N + GQ LDI+ E DE + Sbjct: 117 LFSKAFEAIAKAEVSPEKKARILEVLVKTSN----ELCEGQALDIEFETKDEVTVDEYLK 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL + GAI+ ++ L +G N+GI FQ+ DD+LD D K Sbjct: 173 MISGKTGALFDGSATIGAIVGTDNEEYIRALSKWGRNVGIAFQIWDDVLDLIADEEK 229 >gi|258624384|ref|ZP_05719332.1| geranyltranstransferase [Vibrio mimicus VM603] gi|258583346|gb|EEW08147.1| geranyltranstransferase [Vibrio mimicus VM603] Length = 294 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 88/240 (36%), Positives = 126/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+ Sbjct: 52 ITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111 Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ + + R ++ +L G QGM GQ LD+ E + + Sbjct: 112 GDALQTLAFTILAEGSLSPAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRTILPHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|332977569|gb|EGK14339.1| geranyltranstransferase [Desmospora sp. 8437] Length = 298 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 82/239 (34%), Positives = 126/239 (52%), Gaps = 10/239 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L+E +K ++ L + + + A + L A+ Y+LL GGK++R L Sbjct: 2 EEIQRYLKEKAKSVEARLKEYMERPAGI-----PETLREAMAYSLLAGGKRLRPVLTLAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A + AL A+E IH YSLIHDDLP+MD+ RRG PT H Y E AI+AG+ Sbjct: 57 AEALGGDEEKALPFACAVEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKIYGEAMAILAGD 116 Query: 122 GLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 LLT AF++++ +L L+ G +GM+GGQ+ DIQ E + ++ Sbjct: 117 ALLTRAFDVMAEGALDAELPRKTALTLIRECAVRAGAEGMVGGQVKDIQGEGREVSLEEL 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTG L+ + GA++ + ++E + L + E LG+ FQ+ DD+LD D K Sbjct: 177 QDIHRSKTGDLITGSVRIGAMVGGSGEDELQALTGYAERLGLAFQIQDDVLDVVGDHQK 235 >gi|240948732|ref|ZP_04753104.1| geranyltranstransferase [Actinobacillus minor NM305] gi|240296948|gb|EER47526.1| geranyltranstransferase [Actinobacillus minor NM305] Length = 299 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 86/238 (36%), Positives = 136/238 (57%), Gaps = 11/238 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 L + L +R++ ++ L Q ++H + L+ A+ YA LLGGK++R FL+ Sbjct: 6 ELKTDLVTFQQRVNQFIEQELKQYSAH-----HSPLIDAMAYAVLLGGKRVRPFLIYATG 60 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + V+ AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+AG+ Sbjct: 61 RMLGVSLKALDHSAAAMESIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILAGDS 120 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180 L T+AFE+I+ L D + + + SL G +GM GQ LD +++ I +++ +I Sbjct: 121 LQTFAFELIAK-DPFLTDLQKIKQIQSLAKAAGAKGMCLGQSLDLISENKAISLSELELI 179 Query: 181 QKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL+ + G ++ + K L C+ + +G+ FQ+ DD+LD D K Sbjct: 180 HRNKTGALIVASVLMGFNLSDYAQDEKIKNALECYAKAIGLAFQVQDDILDVIGDTDK 237 >gi|257464799|ref|ZP_05629170.1| geranyltranstransferase [Actinobacillus minor 202] gi|257450459|gb|EEV24502.1| geranyltranstransferase [Actinobacillus minor 202] Length = 299 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 85/238 (35%), Positives = 136/238 (57%), Gaps = 11/238 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 L + L +R++ ++ L Q ++ ++ L+ A+ YA LLGGK++R FL+ Sbjct: 6 ELKTDLVTFQQRVNQFIEQELKQYSA-----YHSPLIDAMAYAVLLGGKRVRPFLIYATG 60 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + V+ AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+AG+ Sbjct: 61 RMLGVSLEALDHSAAAMESIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILAGDS 120 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180 L T+AFE+I+ L D + + + SL G +GM GQ LD +++ I +++ +I Sbjct: 121 LQTFAFELIAK-DPFLTDLQKVKQIQSLAQAAGARGMCLGQSLDLISENKAISLSELELI 179 Query: 181 QKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL+ + G ++ + K L C+ + +G+ FQ+ DD+LD D K Sbjct: 180 HRNKTGALIVASVLMGFNLSDYARDEKIKNALECYAKAIGLAFQVQDDILDVIGDTDK 237 >gi|167766573|ref|ZP_02438626.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1] gi|167711696|gb|EDS22275.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1] gi|291558609|emb|CBL37409.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium SSC/2] Length = 297 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN ++++ +I+ ILD+ L +T +L+A+ + GGK++R L+ Sbjct: 1 MN--FKDEMKQKVAQIEIILDEYLPAQEGLQKT-----VLTAMNTTVKAGGKRLRPMLIN 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E +F AAIE IH YSLIHDDLP++DN RRG+ T HI Y E AI+A Sbjct: 54 ETYQMFGGKEDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILA 113 Query: 120 GNGLLTYAFEIISSP-KTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDE 174 G+ LL YA+E+ + KD I + + L G+ GM+GGQ+ D++ E + Sbjct: 114 GDALLNYAYEVATKAFDLAEKDKIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSM 173 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 Q+ I K KT AL+ GA++A AS+ + ++ GE +G+ FQ+ DD+LD D Sbjct: 174 EQILFIHKNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGDE 233 Query: 235 P 235 Sbjct: 234 E 234 >gi|237744132|ref|ZP_04574613.1| dimethylallyltransferase [Fusobacterium sp. 7_1] gi|229431361|gb|EEO41573.1| dimethylallyltransferase [Fusobacterium sp. 7_1] Length = 297 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 130/240 (54%), Gaps = 13/240 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 L+E + +T L L + + + + + + + YA L GGK++R FL+ Sbjct: 3 DFQVYLKEKTDFFETELKKELKELS------YPETIANGMEYAILNGGKRLRPFLLFVTL 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L N + ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ G+ Sbjct: 57 ELLNEDIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDS 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAF ++S +L + + ++S T G+ GM+GGQM+DIQ E ID + Sbjct: 117 LLTYAFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIQSENKKIDLETLKY 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 I KTG L+ E I+A+ ++++E L + + +G+ FQ+ DD+LD E DL K Sbjct: 177 IHSHKTGKLIKLPIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236 >gi|258515780|ref|YP_003192002.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 296 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 10/238 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 ++L++ + ++D L+ LL +S + + A+RY++ GGK++R ++ A Sbjct: 2 EFLNELKKIAGQVDAALNRYLLPESS-----CPEIIHRAMRYSIFAGGKRLRPAMLIAAA 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + A+E IH YSLIHDDLPSMD+ RRGKPT H + E AI+AG+ Sbjct: 57 EAVGGSADKVMPAACALELIHTYSLIHDDLPSMDDDDYRRGKPTNHKVFGEAMAILAGDA 116 Query: 123 LLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVF 178 LLT +F++++ S + + +++ ++ G G++GGQ++DI ++ ID + Sbjct: 117 LLTMSFQLLAGLSGRNGIAPADVVRVIADISAAAGTTGLIGGQVVDIVSANQEIDAGTLE 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL A SGA+++ A E + L + E+ G+ FQ+ DD+LD D+ K Sbjct: 177 YIHTKKTGALFRAAIRSGAVLSGADDEELKSLTNYAEHFGLAFQITDDILDVAGDMQK 234 >gi|319409361|emb|CBI83005.1| geranyltranstransferase [Bartonella schoenbuchensis R1] Length = 300 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 107/228 (46%), Positives = 152/228 (66%), Gaps = 3/228 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65 + L +++ I+ LD LL A + + + L+ A+R+ L GGK++R FLV + A+LF Sbjct: 6 ALLAKHTHNIEKRLDTLLNYKAQNNEIARPEILIKAMRHGTLNGGKRLRPFLVIQSAALF 65 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 ++ +L +G A+EC+HCYSLIHDDLP+MDN +RRGKPTVH ++E TAI+AGN LLT Sbjct: 66 DIPLEQSLDIGVALECVHCYSLIHDDLPAMDNDTLRRGKPTVHKAFNEATAILAGNALLT 125 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKM 183 AFEII+ L IR L+ +L GL GMLGGQMLD++ E + + +Q M Sbjct: 126 LAFEIIAHKACALSPQIRIDLITALAQAAGLGGMLGGQMLDLEAENKPQDHHAIITLQHM 185 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 KT AL+ FAC++GAI+ +AS+ + ++L FG +LG+ FQL DDLLD Sbjct: 186 KTAALISFACQAGAIIGNASKTQIDQLSTFGTHLGLAFQLTDDLLDVT 233 >gi|14521122|ref|NP_126597.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Pyrococcus abyssi GE5] gi|5458339|emb|CAB49828.1| idsA-like multifunctional short chain isoprenyl diphosphate synthase [Pyrococcus abyssi GE5] Length = 346 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 78/238 (32%), Positives = 117/238 (49%), Gaps = 17/238 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61 L ++++E +K +D L +L+ + + L A R Y L GGK+IR F+V Sbjct: 9 DELFNRIKERAKLVDEKLFELIPE-------KEPKVLYEAARHYPLAGGKRIRPFVVLTA 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 N L A+ AIE IH YSL+HDD+ MD RRGKPTVH + AI+AG+ Sbjct: 62 TEAVGGNALKAIYPAVAIELIHNYSLVHDDIMDMDE--TRRGKPTVHKVWGINMAILAGD 119 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 L + AFE IS + + + + N + GQ LD++ E + + Sbjct: 120 LLFSKAFEAISRAEISPEKKAKVLETIVKASN----ELCEGQALDLEFENREMVSIEEYM 175 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL + + G I+ ++ E L +G N+G+ FQ+ DD+LD D K Sbjct: 176 RMISGKTGALFDASAKVGGIVGTENEEYIEALSRWGRNVGMAFQIWDDVLDLIADEEK 233 >gi|329737240|gb|EGG73494.1| geranyltranstransferase [Staphylococcus epidermidis VCU028] Length = 288 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +++Y+L GGK+IR ++ + N ++ L A+E IH YSLIHDDLP+MDN Sbjct: 25 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK T H Y E AI+AG+ LLT AFE++S+ T ++D+++ ++ L+ G Sbjct: 85 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSN-DTTIEDSVKVSIIKRLSKASGHW 143 Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD++ E I + I + KTGAL+ F+ + +A QN + L F Sbjct: 144 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 203 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLD D K Sbjct: 204 HLGMMFQIKDDLLDVYGDESK 224 >gi|301300958|ref|ZP_07207123.1| putative geranyltranstransferase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851425|gb|EFK79144.1| putative geranyltranstransferase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 277 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 122/205 (59%), Gaps = 6/205 (2%) Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDL 92 N L ++RY++ GGK+IR LV A + +V ++E +H YSLIHDDL Sbjct: 10 SNQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDL 69 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P MDN +RRGKPT H ++ + A++AG+GLLT +FE +S T + ++ + +L+ L Sbjct: 70 PEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLS--LTDIDNDKKIKLISQLAL 127 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G QGM+ GQ DI E + ++ + KTGAL+ +AC +G I++ AS N+ E L Sbjct: 128 AAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELL 187 Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235 R +GEN G+ FQ+ DDLLD D Sbjct: 188 RKYGENFGLAFQIYDDLLDVIGDAK 212 >gi|153216011|ref|ZP_01950233.1| geranyltranstransferase [Vibrio cholerae 1587] gi|124114524|gb|EAY33344.1| geranyltranstransferase [Vibrio cholerae 1587] Length = 294 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD+ E I + Sbjct: 112 GDALQTLAFTILAEGTLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|27468120|ref|NP_764757.1| geranyltranstransferase [Staphylococcus epidermidis ATCC 12228] gi|251810934|ref|ZP_04825407.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060] gi|27315666|gb|AAO04801.1|AE016748_35 geranyltranstransferase [Staphylococcus epidermidis ATCC 12228] gi|251805614|gb|EES58271.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060] Length = 293 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +++Y+L GGK+IR ++ + N ++ L A+E IH YSLIHDDLP+MDN Sbjct: 30 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK T H Y E AI+AG+ LLT AFE++S+ T ++D+++ ++ L+ G Sbjct: 90 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSN-DTTIEDSVKVSIIKRLSKASGHW 148 Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD++ E I + I + KTGAL+ F+ + +A QN + L F Sbjct: 149 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 208 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLD D K Sbjct: 209 HLGMMFQIKDDLLDVYGDESK 229 >gi|282876057|ref|ZP_06284924.1| geranyltranstransferase [Staphylococcus epidermidis SK135] gi|281295082|gb|EFA87609.1| geranyltranstransferase [Staphylococcus epidermidis SK135] Length = 298 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +++Y+L GGK+IR ++ + N ++ L A+E IH YSLIHDDLP+MDN Sbjct: 35 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK T H Y E AI+AG+ LLT AFE++S+ T ++D+++ ++ L+ G Sbjct: 95 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSN-DTTIEDSVKVSIIKRLSKASGHW 153 Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD++ E I + I + KTGAL+ F+ + +A QN + L F Sbjct: 154 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 213 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLD D K Sbjct: 214 HLGMMFQIKDDLLDVYGDESK 234 >gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453] gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453] Length = 301 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 82/243 (33%), Positives = 130/243 (53%), Gaps = 12/243 (4%) Query: 1 MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57 MN P + E R+D+ L +L + + + L ++ Y+L+ GGK++R L Sbjct: 1 MNNRQPINQYMNEICDRLDSELTNLFPPS-----WKVPETLHKSMSYSLMAGGKRMRPLL 55 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V + A+ V A+E +H YSL+HDDLP+MD+ RRGKPT H + E +AI Sbjct: 56 VIAACEAGGGSRDAAIPVACAVEMVHTYSLVHDDLPAMDDDDYRRGKPTNHKVFGEASAI 115 Query: 118 IAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--ID 173 +AG+ LLT+AF I +S + + ++ L G +GM+GGQ+ D++ E Sbjct: 116 LAGDALLTHAFYSIIQASRQFGVPAERVLSIVEDLAEYAGPRGMVGGQVADMEGEQGLTT 175 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 Q+ I KT L+ F+ +G +A ++ + E LR FG ++G+ FQ+ DD+LD D Sbjct: 176 LEQLEYIHLHKTSDLIMFSLMAGGHIAGCTEAQIESLRIFGHHIGLAFQIQDDILDLVGD 235 Query: 234 LPK 236 K Sbjct: 236 ESK 238 >gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 291 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 82/238 (34%), Positives = 128/238 (53%), Gaps = 12/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + + + ++ L L +T +D L A+ Y+L+ GGK++R L+ A Sbjct: 1 MKERWRARQEMVERALQAELDRTD-----VLDDTLRQAMAYSLMAGGKRLRPVLLMAAAD 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + L V A+E IH YSLIHDDLP+MDN RRGK T H + + AI+AG+GL Sbjct: 56 AVGGDGAKFLSVACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 LT AF +I + + + +++ ++ G +GM+GGQ+LD++ E I ++ + Sbjct: 116 LTLAFTVILR-QQDVSADTLLRVVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVH 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KTGAL A SGAI+ AS+ + L + E G+ FQ+ DD+LD D+ K Sbjct: 175 MGKTGALFRAALRSGAILGGASEAQLASLTTYAEQFGLAFQITDDILDVVGTAEDIGK 232 >gi|319899404|ref|YP_004159501.1| geranyltranstransferase [Bartonella clarridgeiae 73] gi|319403372|emb|CBI76931.1| geranyltranstransferase [Bartonella clarridgeiae 73] Length = 301 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 105/234 (44%), Positives = 154/234 (65%), Gaps = 4/234 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 + L +++ ++ LD LL A + + + L++A+R+ L GGK++R FLV + Sbjct: 2 HEFTTLLAKHAYNVEKRLDTLLSHKAQNGEITRPEILINAMRHGVLNGGKRLRPFLVIQS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A++F++ +L +G A+EC+HCYSLIHDDLP++DN +RRGKPTVH+ +DE TAI+AGN Sbjct: 62 AAIFDIPPEHSLDIGVALECLHCYSLIHDDLPALDNDTLRRGKPTVHVAFDEATAILAGN 121 Query: 122 GLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVF 178 LLT+AFEII+ + + L+ +LT GL GM+GGQMLD++ E DE+ Sbjct: 122 ALLTFAFEIIAHKEAYSFSPKTKIDLITALTQAAGLGGMIGGQMLDLEAEKKPQDESATI 181 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q+MKT ALM FAC++GAIM AS+ ++L FG +G+ FQL DDLLD Sbjct: 182 TLQQMKTAALMRFACQAGAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLDLVS 235 >gi|90422021|ref|YP_530391.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18] gi|90104035|gb|ABD86072.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18] Length = 308 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 105/240 (43%), Positives = 147/240 (61%), Gaps = 5/240 (2%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 ++ +L + + + +L LL + RL+ AIRY+ L GGK++R FLV Sbjct: 6 LSADFVQRLDQTADDTEALLARLLSDQLLPDEIARPRRLMEAIRYSSLAGGKRLRPFLVV 65 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E A++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ TAI+A Sbjct: 66 ESAAVFGVPRGAALLAGAALECIHCYSLIHDDLPAMDNSELRRGRPTLHRAYDDATAILA 125 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175 G+ LLT AF+II+ + +R L +L G+ GM+GGQMLD+ E + Sbjct: 126 GDALLTLAFDIITRDEIHSDAGVRLALTRALARASGIGGMVGGQMLDLAGEGRFGDREPV 185 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 V +Q+MKTGAL+ F C +GAI+ A++ + + L +G LG FQ+ADDLLD E D Sbjct: 186 DVARLQQMKTGALLRFGCIAGAILGQATKEQTKALDDYGRALGEAFQIADDLLDVEGDAA 245 >gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ] gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ] Length = 297 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 82/235 (34%), Positives = 127/235 (54%), Gaps = 11/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L L+E +D L+ L + + + L A+RY++ GGK++R L+ Sbjct: 2 DLKVYLKEKIALVDAALEQYLPK-----EEERPQSLHKAMRYSIFAGGKRVRPVLMLAAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 A+ A+E IH YSLIHDDLP+MD+ RRG+PT H + E AI+AG+G Sbjct: 57 EAVGGQIDKAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDG 116 Query: 123 LLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 LLT AF+++S P+ + R ++ + G GM+GGQ++D++ E +D V Sbjct: 117 LLTEAFKLMSDPRFAAGIDPAARLGVIHEIATCAGTYGMVGGQVVDMESEGKPDMDLPTV 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ + +GA++ A + +R +GE G+ FQ+ADD+LD E Sbjct: 177 QYIHAHKTGALIKASVVAGALLGGADDKQLAAIRRYGEAAGLAFQIADDILDIEG 231 >gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase [Deferribacter desulfuricans SSM1] gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase [Deferribacter desulfuricans SSM1] Length = 300 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 88/243 (36%), Positives = 135/243 (55%), Gaps = 13/243 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 N L + ++ ++R+D + + L + + L+ ++RY++ GGK++R L+ Sbjct: 4 NFNLKNYIKFFAQRVDDWIRNYLT-----YENEQTIGLIESMRYSIFAGGKRLRPVLIYS 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F AA+E +H YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG Sbjct: 59 SYGIFESYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKMFGEATAILAG 118 Query: 121 NGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 + LLT AFEI+ + + L + G +GM+GGQ DI +E ID+ Sbjct: 119 DALLTLAFEIMLDKDINKDIPTETILEAAFKLAKSAGYKGMVGGQYADIINENKEIDKNT 178 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EED 233 + I K KT AL+ + CE GAI+ A + +K+ L FGE +G+ FQ+ DD+LD E+ Sbjct: 179 LDFIHKHKTAALISYCCELGAILGFADEKDKQNLAEFGEKIGLAFQIVDDILDITSTTEE 238 Query: 234 LPK 236 L K Sbjct: 239 LGK 241 >gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 299 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 92/239 (38%), Positives = 129/239 (53%), Gaps = 10/239 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 N L LQ +R + L L Q + LL A++Y ALLGGK++R FL Sbjct: 3 NSSLLQLLQHYQERNNQQLTHWL-----DAQPFADQTLLKAMKYGALLGGKRVRPFLTYV 57 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 ++ VN AAIECIH YSLIHDDLP+MD+ +RRG+PT HI +DE TA++AG Sbjct: 58 TGNMLGVNEENLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIAFDEATAVLAG 117 Query: 121 NGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177 + L T AFEI++ + ++ R +++ L G GM GQ LD + + + TQ+ Sbjct: 118 DALQTLAFEILAEGTLSIDGESQRIKMIKELAQASGAAGMCMGQALDLDGEGKHLGLTQL 177 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I K KTGAL+ A GA+ A +L + E +G+ FQ+ DD+LD D Sbjct: 178 EQIHKHKTGALIRCAVRLGALAAGEKGLEILPQLNTYAEAIGLAFQVQDDILDVISDTE 236 >gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3] gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3] Length = 296 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 136/236 (57%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MKIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+I ++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +GAI+++A++ ++E+L F +N+G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVEG 230 >gi|169828970|ref|YP_001699128.1| geranyltranstransferase [Lysinibacillus sphaericus C3-41] gi|168993458|gb|ACA40998.1| Geranyltranstransferase [Lysinibacillus sphaericus C3-41] Length = 293 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 92/242 (38%), Positives = 140/242 (57%), Gaps = 14/242 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L ++ N +I+ + L+ + + + L ++ Y+L GGK+IR V Sbjct: 1 MNEPLKYFIESNIPQIEETMFALVSKIDAPVD------LKDSMLYSLKAGGKRIRPLFVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L+ N L VGA IE IH YSLIHDDLPSMDN RRGKPT H Y E A +A Sbjct: 55 AVLELYRKNLQDGLIVGAVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 G+ L T AF I++ + + R +L+ L+ G +GM+GGQ+LD++ E +D T++ Sbjct: 115 GDALNTLAFGILA--RMDVTAEKRIELVQLLSVAAGAEGMVGGQVLDMEGEQRQLDLTEL 172 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234 + KTGAL+ F+ E+GA++A AS+ ++ L+ + ++G+ FQ+ DD+LD E +L Sbjct: 173 EQVHVNKTGALLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEEL 232 Query: 235 PK 236 K Sbjct: 233 GK 234 >gi|84489654|ref|YP_447886.1| IdsA [Methanosphaera stadtmanae DSM 3091] gi|84372973|gb|ABC57243.1| IdsA [Methanosphaera stadtmanae DSM 3091] Length = 327 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 76/230 (33%), Positives = 111/230 (48%), Gaps = 14/230 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L+ ++ ID ++DD L + + L + Y + GGKK R L Sbjct: 7 LKAYAEEIDVVIDDSLSKLE-------PESLYESSEYLIKAGGKKFRPALTLLSCQAVGG 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AL+ AAIE H +SLIHDD+ MDN RRGKP VH + E AI+AG+ L + Sbjct: 60 KPEKALKAAAAIELTHTFSLIHDDI--MDNDDTRRGKPAVHKVWGEPLAILAGDSLFAKS 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMK 184 FE++S R L + N + + GQ LD+ E + + + + K Sbjct: 118 FELLSQSAEDNIAYERVVDALQVLTNSCIN-ICEGQALDMAFEDTFNVTKDEYMNMIYKK 176 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 TG L+ + GAIM AS NE + LR +G+ +G+ FQ+ DD +D D Sbjct: 177 TGDLITASTTIGAIMGGASSNEIQALRTYGKQIGLAFQIQDDYIDLTGDE 226 >gi|229523313|ref|ZP_04412720.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] gi|229339676|gb|EEO04691.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] Length = 294 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD+ E I + Sbjct: 112 GDALQTLAFTILAEGTLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|260776529|ref|ZP_05885424.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260607752|gb|EEX34017.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 294 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 126/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M+ L S Q N+++++ L+ L L+ A+RY LLGGK+ R FLV Sbjct: 1 MHEALTSLQQRNNRQLERWLNQL---------PHQEQPLIEAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKLEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ + + R +++ +L G GM GQ LD+ E + + Sbjct: 112 GDALQTLAFTILADGELSPEAETYRIKMVKALAEASGANGMCLGQALDLSAEGQKVSLAE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A +L F + +G+ FQ+ DD+LD D Sbjct: 172 LENIHRNKTGALMKCAIRLGALAAGQKGSEILPQLDQFADAIGLAFQVQDDILDIISDTE 231 >gi|302879474|ref|YP_003848038.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] Length = 297 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 8/238 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M + E + +L +L Q RL A+RYA+L GGK++R L Sbjct: 2 MTADFSAWAAERQAAFEEVLRRVLPQ-----PEVSPQRLHQAMRYAVLEGGKRVRPLLAF 56 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L + V A++E IH YSL+HDD+P MD+ +RRGKPT H+QYDE TA++ Sbjct: 57 AAGELTGADIARVDIVAASVELIHAYSLVHDDMPCMDDDVLRRGKPTCHVQYDEATALLV 116 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177 G+ L T AF++++ + + ++ L G +GM GGQ LD + + ++ Sbjct: 117 GDSLQTLAFQLLTEHRLSDGPQQQMAMIRLLASASGSRGMAGGQAIDLDSVGKSLTLPEL 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ A GA S + L + + +G+ FQ+ DD+LD E D Sbjct: 177 ENMHIHKTGALIRAAVLLGAQCGAVSPVQLACLDHYAKCVGLAFQVVDDVLDAEADTA 234 >gi|317498984|ref|ZP_07957266.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893733|gb|EFV15933.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 297 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 82/241 (34%), Positives = 128/241 (53%), Gaps = 13/241 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN ++++ +I+ ILD+ L +T +L+A+ + GGK++R L+ Sbjct: 1 MN--FKDEMKQKVAQIEIILDEYLPAQEGLQKT-----VLTAMNTTVKAGGKRLRPMLIN 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E +F AAIE IH YSLIHDDLP++DN RRG+ T HI Y E AI+A Sbjct: 54 ETYQMFGGKGDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILA 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNI---RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDE 174 G+ LL YA+E+ + + + + + L G+ GM+GGQ+ D++ E + Sbjct: 114 GDALLNYAYEVATKAFDLAEKDQIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSM 173 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 Q+ I K KT AL+ GA++A AS+ + ++ GE +G+ FQ+ DD+LD D Sbjct: 174 EQILFIHKNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGDE 233 Query: 235 P 235 Sbjct: 234 E 234 >gi|225848385|ref|YP_002728548.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Sulfurihydrogenibium azorense Az-Fu1] gi|225643069|gb|ACN98119.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Sulfurihydrogenibium azorense Az-Fu1] Length = 288 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 89/236 (37%), Positives = 137/236 (58%), Gaps = 14/236 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + L++ ++ I+T L +L+ + L A+ Y+L GGK+IR L+ E + Sbjct: 3 DIKIYLKQKAELINTYLKNLIPK-------GTPKELFDAMEYSLTVGGKRIRPILIIESS 55 Query: 63 SLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 N V+ + V ++E IH YSLIHDDLP+MD+ +RRGKPT H + E AI+AG Sbjct: 56 KAVNPDVDIEDFIDVALSVEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAG 115 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 +GLLTYAFE+IS + D + +++ +++++G+ GM+GGQ DI + F D + I Sbjct: 116 DGLLTYAFELISGNQKITPDKLL-KVINVISNSVGVYGMVGGQAGDILENFKD---IDFI 171 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT + C+ G I+A AS+ E E L+ +G +GI FQ+ DD+LD D K Sbjct: 172 HTHKTAKFISGCCQVGGILAGASKKEIENLKNYGLYIGIAFQIWDDILDEIGDEEK 227 >gi|163869177|ref|YP_001610429.1| geranyltranstransferase [Bartonella tribocorum CIP 105476] gi|161018876|emb|CAK02434.1| geranyltranstransferase [Bartonella tribocorum CIP 105476] Length = 301 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 106/233 (45%), Positives = 152/233 (65%), Gaps = 3/233 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 + L ++ +++ L LL + + + L+ A+RY L GGK++R FLV + Sbjct: 2 HEFTTLLAKHGHTVESRLSTLLSDHIQNGEISRPENLIKAMRYGVLNGGKRLRPFLVIQS 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+LF++ +L V A+EC+HCYSLIHDDLP+MDN +RRGKPTVH+++DE TAI+AGN Sbjct: 62 AALFDIPVEHSLDVACALECVHCYSLIHDDLPAMDNDILRRGKPTVHVEFDEATAILAGN 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179 LLT+AFEII+ L + R +L+ +L + GL GMLGGQMLD++ E + + Sbjct: 122 ALLTFAFEIIAHKANTLSTDTRIKLITALAQSAGLGGMLGGQMLDLEAEKKPQENTDIIT 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q+MKT AL+ FAC++GAI+ +ASQ +L FG LG+ FQL DDLLD Sbjct: 182 LQRMKTAALISFACQAGAIIGNASQELLTKLTAFGSYLGLAFQLTDDLLDVTA 234 >gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana] Length = 345 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 76/246 (30%), Positives = 114/246 (46%), Gaps = 19/246 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60 + S + +K ++ L++ + + ++ A+RY LL GK++R L Sbjct: 47 DFKFMSYMVNKAKSVNKALEEAVPLREPEL------KIREAMRYTLLSDGKRVRPMLCLA 100 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L TA+ AIE +H SLI DDLP MDN +RRGKPT HI + E AI+A Sbjct: 101 ACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILAS 160 Query: 121 NGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD------IQDEFID 173 L+ A + SS + + + + + +G++ GQ D D Sbjct: 161 QALIALAVQKTTSSTFADVPPERILKTVQEMVKAV--EGLVAGQQADLAGEGMRFDSDTG 218 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-- 231 + I KT AL+ A GAIM S E ERLR + +G++FQ+ DD+LD Sbjct: 219 LEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKS 278 Query: 232 -EDLPK 236 E+L K Sbjct: 279 SEELGK 284 >gi|163816790|ref|ZP_02208153.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759] gi|158448047|gb|EDP25042.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759] Length = 313 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 9/234 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + E ++RID I+ L + +T + A+ Y++ GGK++R L+ E Sbjct: 20 SLDKAIAERAERIDGIVAGYLPKVEGFPRT-----VCEAMAYSVEAGGKRLRPMLMEETY 74 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + AAIE IH YSLIHDDLP++DN RRG+ T H+ + E AI+AG+ Sbjct: 75 RMLGGSTDVVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRQTSHVVFGEAMAILAGDA 134 Query: 123 LLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM 179 LL YA+E +D + S+ + L G+ GMLGGQ++D++ + Q+ Sbjct: 135 LLNYAYETACKAFDLDEDARKVSEALRILARKPGVYGMLGGQVVDVEMTGRTLTREQLEY 194 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KTGAL+ + GA++A A + E + ++G+ FQ+ DD+LD D Sbjct: 195 VYENKTGALIEASMMIGAVLAGADSEQVEAVEKIASDIGMAFQVQDDILDVCGD 248 >gi|121588137|ref|ZP_01677884.1| geranyltranstransferase [Vibrio cholerae 2740-80] gi|121728346|ref|ZP_01681376.1| geranyltranstransferase [Vibrio cholerae V52] gi|147674651|ref|YP_001216368.1| geranyltranstransferase [Vibrio cholerae O395] gi|153817233|ref|ZP_01969900.1| geranyltranstransferase [Vibrio cholerae NCTC 8457] gi|227081066|ref|YP_002809617.1| geranyltranstransferase [Vibrio cholerae M66-2] gi|229505505|ref|ZP_04395015.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|262168689|ref|ZP_06036384.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] gi|298498988|ref|ZP_07008795.1| geranyltranstransferase [Vibrio cholerae MAK 757] gi|121547628|gb|EAX57727.1| geranyltranstransferase [Vibrio cholerae 2740-80] gi|121629401|gb|EAX61831.1| geranyltranstransferase [Vibrio cholerae V52] gi|126512267|gb|EAZ74861.1| geranyltranstransferase [Vibrio cholerae NCTC 8457] gi|146316534|gb|ABQ21073.1| geranyltranstransferase [Vibrio cholerae O395] gi|227008954|gb|ACP05166.1| geranyltranstransferase [Vibrio cholerae M66-2] gi|227012710|gb|ACP08920.1| geranyltranstransferase [Vibrio cholerae O395] gi|229357728|gb|EEO22645.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|262022807|gb|EEY41513.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] gi|297543321|gb|EFH79371.1| geranyltranstransferase [Vibrio cholerae MAK 757] Length = 294 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD+ E I + Sbjct: 112 GDALQTLAFTILAEGDLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|261492167|ref|ZP_05988738.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495736|ref|ZP_05992178.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308591|gb|EEY09852.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312240|gb|EEY13372.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 297 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 87/241 (36%), Positives = 134/241 (55%), Gaps = 11/241 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M+ L + L +RI+ L + L T S L+ A+ YA LLGGK++R FL+ Sbjct: 1 MSYLLATDLTHLQQRINHFLAEKLKTTDS-----VGSPLVEAMAYAVLLGGKRVRPFLIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + V AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A Sbjct: 56 ATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ L ++AFE++++ L D + + L G +GM GQ LD +++ + ++ Sbjct: 116 GDALQSFAFELLAT-DPHLTDREKVAQVTELATASGAKGMCLGQSLDLIAENKAVSLEEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +I + KTGAL+ + G ++ SQN K+ L + + +G+ FQ+ DD+LD D Sbjct: 175 ELIHRNKTGALILSSVMMGLNLSEHSQNLAIKQPLVNYAKAIGLAFQVQDDILDVIGDTD 234 Query: 236 K 236 K Sbjct: 235 K 235 >gi|15231055|ref|NP_188651.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75273683|sp|Q9LJY2|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10, mitochondrial; Short=GGPP synthase 10; Short=GGPS10; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10; AltName: Full=Dimethylallyltranstransferase 10; AltName: Full=Farnesyl diphosphate synthase 10; AltName: Full=Farnesyltranstransferase 10; AltName: Full=Geranyltranstransferase 10; Flags: Precursor gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana] gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP synthetase/farnesyltranstransferase [Arabidopsis thaliana] gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana] Length = 344 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 76/246 (30%), Positives = 114/246 (46%), Gaps = 19/246 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60 + S + +K ++ L++ + + ++ A+RY LL GK++R L Sbjct: 47 DFKFMSYMVNKAKSVNKALEEAVPLREPEL------KIREAMRYTLLSDGKRVRPMLCLA 100 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L TA+ AIE +H SLI DDLP MDN +RRGKPT HI + E AI+A Sbjct: 101 ACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILAS 160 Query: 121 NGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD------IQDEFID 173 L+ A + SS + + + + + +G++ GQ D D Sbjct: 161 QALIALAVQKTTSSTFADVPPERILKTVQEMVKAV--EGLVAGQQADLAGEGMRFDSDTG 218 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-- 231 + I KT AL+ A GAIM S E ERLR + +G++FQ+ DD+LD Sbjct: 219 LEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKS 278 Query: 232 -EDLPK 236 E+L K Sbjct: 279 SEELGK 284 >gi|153830561|ref|ZP_01983228.1| geranyltranstransferase [Vibrio cholerae 623-39] gi|148873959|gb|EDL72094.1| geranyltranstransferase [Vibrio cholerae 623-39] Length = 294 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD+ E I + Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|18977474|ref|NP_578831.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638] gi|18893173|gb|AAL81226.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638] Length = 340 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 77/240 (32%), Positives = 113/240 (47%), Gaps = 17/240 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVT 59 M L K++E +K +D L L+ + + L A R Y L GGK++R F+V Sbjct: 1 MYDELFKKIKEKAKFVDEKLLSLIPE-------KEPKILYEAARHYPLAGGKRVRPFVVL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A+ AIE IH YSL+HDD+ MD RRG+PTVH + AI+A Sbjct: 54 TATEAVGGEWEKAIYPAVAIELIHNYSLVHDDIMDMDE--TRRGRPTVHKVWGINMAILA 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQ 176 G+ L + AFE IS + + R + N + GQ +D++ E D + Sbjct: 112 GDLLFSKAFEAISRAEIPPEKKARVLETVVKASN----ELCEGQAMDLEFEKRDTVTIEE 167 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL + + G I+ ++ L +G N+GI FQ+ DD+LD D K Sbjct: 168 YMRMISGKTGALFDASAKVGGIVGTDNEEYINALSTWGRNVGIAFQIWDDVLDLIADEEK 227 >gi|167758090|ref|ZP_02430217.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704] gi|167663987|gb|EDS08117.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704] Length = 314 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 10/233 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + ++++ ++I+ IL + L + ++ A+ Y+LL GGK++R L+ E Sbjct: 21 MQAQMKHKVEKIEGILTEYLPRQEG-----FQSIIMEAMNYSLLAGGKRLRPMLMNETYR 75 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF AAIE IH YSL+HDDLP+MDN RRG+ T HI Y E I+AG+ L Sbjct: 76 LFGGESPLIRPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDAL 135 Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179 L YAFE + + + + L G+ GM+GGQ++D+++ I + + Sbjct: 136 LNYAFETAFKAFVMEPEESLLIGRALGVLGEKAGIYGMIGGQVIDVKETGHSIPKEVLDT 195 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I ++KT AL+ + GAI+ AS+ E + + +GI FQ+ DD+LD Sbjct: 196 IYELKTSALIEASMMVGAILGGASEEEVKIIEKIARYVGIAFQIQDDILDVTS 248 >gi|120599627|ref|YP_964201.1| polyprenyl synthetase [Shewanella sp. W3-18-1] gi|120559720|gb|ABM25647.1| farnesyl-diphosphate synthase [Shewanella sp. W3-18-1] Length = 293 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 95/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S +QE R+DT L +L +A++Y ALLGGK+IR FLV Sbjct: 2 LASTIQEYQLRVDTQLKQRFSTLE-----DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 T AFEI++ + ++ +L G +GM GGQ +D D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 MKTGAL+ A E I +A +++ + + F +G+ FQ+ DD+LD E+L K Sbjct: 177 NMKTGALISCAVELALIAVNAPKDQYQTMMTFAHAVGLAFQVQDDILDIIATTEELGK 234 >gi|238898686|ref|YP_002924367.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466445|gb|ACQ68219.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 312 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 82/240 (34%), Positives = 129/240 (53%), Gaps = 10/240 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 + +L + KR++T L L + +N LL +RY+ L+GGK++R +LV Sbjct: 13 SFDFDQQLSKYQKRVETYLSSALDKL-----PAYNTVLLDVMRYSTLMGGKRLRPYLVYA 67 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + ++ AAIECIH YSL+HDDLPSMDN +RRG+ T H+++ E AI+AG Sbjct: 68 TGQMLGLSLSNLDAPAAAIECIHSYSLLHDDLPSMDNDDLRRGELTGHVKFGEANAILAG 127 Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177 + L + AF I++ + + R ++ L G GM GGQ LD+ E++D + Sbjct: 128 DSLQSLAFSILADDRMPDVVTEDRLAMLSELARASGATGMCGGQALDMASEYLDISLETL 187 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +I KTGAL+ A GA+ A + L + +++G+ FQ+ DD+LD + K Sbjct: 188 ELIHHHKTGALLRAAVRLGALAAGETGRKALPWLDQYAKSIGLAFQVQDDILDEIGEARK 247 >gi|283797528|ref|ZP_06346681.1| geranyltranstransferase [Clostridium sp. M62/1] gi|291074897|gb|EFE12261.1| geranyltranstransferase [Clostridium sp. M62/1] Length = 298 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 12/236 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L +L + ++ + I+ L Q +T H + A+ Y++ GGK++R L+ E Sbjct: 2 ELKEQLLQYTRETEEIVFSYLPQ-----ETGHQKTIFEAMNYSVRAGGKRLRPLLMREVY 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+ Sbjct: 57 RLFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 LL YA E S D + + + + L+ G+ GM+GGQ +D++ ++ + + Sbjct: 117 LLIYAVETASRAFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREK 176 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I ++KTGAL+ + GA++A AS+ E + + N+G+ FQ+ DD+LD Sbjct: 177 LDFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTG 232 >gi|323693774|ref|ZP_08107969.1| geranyltranstransferase [Clostridium symbiosum WAL-14673] gi|323502160|gb|EGB18027.1| geranyltranstransferase [Clostridium symbiosum WAL-14673] Length = 294 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 78/232 (33%), Positives = 123/232 (53%), Gaps = 9/232 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 + +L ++++ ++ ++ L H +T + A+ Y++ GGK++R L+ E Sbjct: 2 MNEQLLQSTEEVEQVIYSYLPAEEGHQKT-----IFEAMNYSVKAGGKRLRPLLMREVYR 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+ L Sbjct: 57 LFGGTGKEIEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVVYGYDMAVLAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180 L YA E + ++ R + + L G+ GM+GGQ +D++ D+ I + ++ I Sbjct: 117 LIYAIETAARAFQMTDNSQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKLIPKDKLDFI 176 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++KTGAL+ A GA+MA AS E E + +G+ FQ+ DD+LD Sbjct: 177 YRLKTGALLEAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTS 228 >gi|254285563|ref|ZP_04960527.1| geranyltranstransferase [Vibrio cholerae AM-19226] gi|150424425|gb|EDN16362.1| geranyltranstransferase [Vibrio cholerae AM-19226] Length = 294 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD+ E I + Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917] gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917] Length = 315 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 124/233 (53%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L +++ LD + + + + L A+RY+LL GGK++R L Sbjct: 20 FDFNAYLAARKAEVESALD-------ASLPPERPESLREAMRYSLLAGGKRLRPILCLAA 72 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+ Sbjct: 73 CELAGGDPALAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGD 132 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE+++ + Q++ L+ G G++GGQ++D++ E +D + Sbjct: 133 ALLTRAFEMVALRSPGVPAERLLQVVAELSLVAGAPGLVGGQVVDLESEGKQVDLETLEY 192 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ +GA++A A + + LR + +G+ FQ+ DD+LD Sbjct: 193 IHLHKTGALLRACVITGALIAGADASRIDSLRTYARGIGLAFQIVDDILDVTA 245 >gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8] gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8] Length = 303 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 84/239 (35%), Positives = 131/239 (54%), Gaps = 16/239 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62 P LQ + ++ +LDDLL + RL A+RYA+LGG K++R+ LV Sbjct: 7 AFPEWLQGRVQHVEDVLDDLLPPADA-----LPSRLHEAMRYAVLGGGKRVRAALVYAAG 61 Query: 63 SLFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 V+ + R AA+E IH YSL+HDDLP MD+ +RRG+PT H+++DE TA Sbjct: 62 QACPVSGSVLAVQASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVKFDEATA 121 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE 174 ++AG+ L AF++++S + + Q SL G QGM GGQ +D+ + Sbjct: 122 MLAGDALQPLAFDLLAS--MPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGHALSR 179 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ + MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 180 DELQTMHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTAD 238 >gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666] gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666] Length = 306 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 121/236 (51%), Gaps = 6/236 (2%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L + + + I+ L + A L A+RYA+L GGK++R LV Sbjct: 10 FTLSAWSAQQLETIEQALSRWV---ACPTDAPAPAGLGDAMRYAVLDGGKRLRPLLVMAA 66 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 N N ALR A+E IH YSL+HDD+P MDN +RRGKPTVH+++ E A++AG+ Sbjct: 67 CEAVNGNAEAALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALLAGD 126 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179 L AFE ++ + +++L L G QGM GGQ +D+ + T Q+ Sbjct: 127 ALQALAFEFLTPDDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGLPLTSGQLHE 186 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + ++KTGAL+ + G A + LR +G +G+ FQ+ DD+LD D Sbjct: 187 MHRLKTGALLQASVMMGTACGAAPPAAQHALREYGAAVGLAFQVVDDILDVTADSA 242 >gi|258621633|ref|ZP_05716665.1| geranyltranstransferase [Vibrio mimicus VM573] gi|258586105|gb|EEW10822.1| geranyltranstransferase [Vibrio mimicus VM573] Length = 294 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 88/240 (36%), Positives = 127/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+ Sbjct: 52 ITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ + + R ++ +L G QGM GQ LD+ E + + Sbjct: 112 GDALQTLAFTILAEGTLSPAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALSAGEKGRAILPHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|46907589|ref|YP_013978.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str. F2365] gi|47093750|ref|ZP_00231500.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858] gi|226223964|ref|YP_002758071.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes Clip81459] gi|254932322|ref|ZP_05265681.1| geranyltranstransferase [Listeria monocytogenes HPB2262] gi|46880857|gb|AAT04155.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str. F2365] gi|47017871|gb|EAL08654.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858] gi|225876426|emb|CAS05135.1| Putative Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583878|gb|EFF95910.1| geranyltranstransferase [Listeria monocytogenes HPB2262] gi|328467501|gb|EGF38570.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 1816] gi|328475077|gb|EGF45865.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 220] gi|332311804|gb|EGJ24899.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A] Length = 293 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 ++ ++D+ L + S + RL ++ Y++ GGK+IR LV VN L Sbjct: 7 FLEQYKKVIDESLFKEISERNIE--PRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I Sbjct: 65 LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 ++ + L R L+ ++ + G +GM+GGQ+ D++ E + ++ I KTG L Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + FA S A +A A + +RLR F EN+GI FQ++DD+LD D K Sbjct: 184 LIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|153827049|ref|ZP_01979716.1| geranyltranstransferase [Vibrio cholerae MZO-2] gi|229513011|ref|ZP_04402477.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] gi|229525505|ref|ZP_04414910.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|254225115|ref|ZP_04918729.1| geranyltranstransferase [Vibrio cholerae V51] gi|262191492|ref|ZP_06049677.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae CT 5369-93] gi|297581274|ref|ZP_06943198.1| geranyltranstransferase [Vibrio cholerae RC385] gi|125622502|gb|EAZ50822.1| geranyltranstransferase [Vibrio cholerae V51] gi|149739090|gb|EDM53386.1| geranyltranstransferase [Vibrio cholerae MZO-2] gi|229339086|gb|EEO04103.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|229349904|gb|EEO14858.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] gi|262032640|gb|EEY51193.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae CT 5369-93] gi|297534590|gb|EFH73427.1| geranyltranstransferase [Vibrio cholerae RC385] gi|327483628|gb|AEA78035.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4] Length = 294 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD+ E I + Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|115522205|ref|YP_779116.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53] gi|115516152|gb|ABJ04136.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53] Length = 308 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 109/237 (45%), Positives = 146/237 (61%), Gaps = 5/237 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 +L + ++ +T L LL + RL+ AIRY+ L GGK++R FLV E A Sbjct: 9 DFAQRLDQTAEDTETQLASLLSDALLPDEIARPKRLMEAIRYSTLGGGKRLRPFLVVESA 68 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F V AL VGAA+ECIHCYSLIHDDLPSMDN +RRG+PT+H YD+ TAI+AG+ Sbjct: 69 AVFGVPRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDA 128 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178 LLT AF+IIS + +R L +L G+ GM+GGQMLD+ E + V Sbjct: 129 LLTLAFDIISRDEIHPDAKVRLLLTRALARASGIGGMVGGQMLDLAGEGRFGDREPVDVA 188 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q+MKTGAL+ F C +GA++ AS + + L +G LG FQ+ADDLLD E D Sbjct: 189 RLQQMKTGALLRFGCIAGALLGQASPQQYQALDDYGRALGEAFQIADDLLDVEGDAA 245 >gi|323495108|ref|ZP_08100195.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio brasiliensis LMG 20546] gi|323310659|gb|EGA63836.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio brasiliensis LMG 20546] Length = 294 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L L N L+ A+RY LLGGK+ R FLV Sbjct: 1 MQEALTSLQQRNNQQLDNWLQSL---------PHQNLPLIEAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKLEDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF I++ + +N R +++ L G GM GQ LD ++ + + Sbjct: 112 GDALQTLAFTILADGQLNPEAENYRIKMVKVLADASGANGMCMGQALDLAAENRNVSLQE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + + +G+ FQ+ DD+LD D Sbjct: 172 LEEIHRNKTGALMKSAIRLGALAAGEKGERVLPLLDQYADAIGLAFQVQDDILDIISDTE 231 >gi|15231869|ref|NP_188069.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana] Length = 284 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 80/222 (36%), Positives = 123/222 (55%), Gaps = 10/222 (4%) Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L T + + + A+RY+LL GGK++R L L + TA+ A+E IH Sbjct: 3 LSTFRSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIH 62 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 SLIHDDLP MDN +RRGKPT H + E A++AG+ LL AFE ++ + L + R Sbjct: 63 TSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASER 122 Query: 144 -SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ETQVFMIQKMKTGALMCFACESGA 197 + ++ L IG +G++ GQ++D+ E ++ ++ I KT AL+ A GA Sbjct: 123 MIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGA 182 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 IM ++ E E+LR + +G++FQ+ DD+LD E+L K Sbjct: 183 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGK 224 >gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941] gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941] Length = 299 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 84/226 (37%), Positives = 122/226 (53%), Gaps = 7/226 (3%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 +R I ++ L + + +RL A+RY+LL GGK++R L E A LF Sbjct: 9 RWERHRRIFEEYL-EGLRFTEEPALERLQEAMRYSLLAGGKRVRPLLCMESARLFGAPPE 67 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 L AAIE IH YSLIHDDLP+MDN RRG+PT H ++ E AI+AG+ A + Sbjct: 68 RVLPSAAAIELIHTYSLIHDDLPAMDNDDFRRGRPTSHKKFGEAMAILAGDAFFGEALTL 127 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTG 186 I + + + R ++ L + G+ GM+GGQ+LD+ D +FMI + KTG Sbjct: 128 I-TVRQEGTCEQRLGVVQELASSTGVNGMVGGQVLDMDQTGAGGSADPGMLFMIHRYKTG 186 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 AL+ + GAI+A A + E + + LG+ FQ+ DD+LD Sbjct: 187 ALIRSSARVGAILAGAGEEGLEAISRYATELGLCFQIVDDVLDAVG 232 >gi|262165140|ref|ZP_06032877.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] gi|262024856|gb|EEY43524.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] Length = 294 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 88/240 (36%), Positives = 127/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+ Sbjct: 52 ITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ + + R ++ +L G QGM GQ LD+ E + + Sbjct: 112 GDALQTLAFTILAEGTLSPAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAILPHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|284006403|emb|CBA71639.1| geranyltranstransferase [Arsenophonus nasoniae] Length = 302 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 90/244 (36%), Positives = 128/244 (52%), Gaps = 13/244 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M + Q R++ L + + + +L++A++Y ALLGGK++R FLV Sbjct: 1 MTLSFADQRQWVQNRVNKTLLNQFQRL-----PFNQSQLVAAMKYGALLGGKRLRPFLVY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + NV AA+ECIH +SLIHDDLP+MDN +RRG+PT HI + E AI+A Sbjct: 56 AIGDMLNVAVENLDVPAAAVECIHAFSLIHDDLPAMDNDNLRRGQPTCHISFGEAHAILA 115 Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF+I+S S + D R ++ L G GM GGQ LD++ E ID T Sbjct: 116 GDALQTLAFDILSRSAMPDVSDTYRLAMIAELATATGAAGMCGGQALDMESEGQQIDFTT 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233 + I KTGAL+ A A+ A L + +G++FQ+ DD+LD D Sbjct: 176 LETIHHHKTGALIRAAIRMSALTAGNQGNKLLPLLDNYANAIGLLFQVHDDILDVTGDTD 235 Query: 234 -LPK 236 L K Sbjct: 236 ILGK 239 >gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032] gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032] Length = 296 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 132/240 (55%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L L + I+ L + + L S++ Y+L GGK++R LV Sbjct: 1 MTSNLNEFLTTRKQTIEDYLFTYVQELTI------PKDLKSSMLYSLKAGGKRLRPVLVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + N + VG A+E IH YSLIHDDLP MD+ +RRGKPT H Y E TA++A Sbjct: 55 ALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLA 114 Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176 G+ LLT +F +I S + + + + +++ L + G GM+GGQ D++ E + + Sbjct: 115 GDALLTESFRLITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I KTG L+ F+ +GA++A AS ++ E+LR F ++GI FQ+ DD+LD E K Sbjct: 175 LEYIHARKTGKLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEK 234 >gi|114320106|ref|YP_741789.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1] gi|114226500|gb|ABI56299.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1] Length = 306 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 82/229 (35%), Positives = 124/229 (54%), Gaps = 10/229 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70 R++ LD L + +H RL A+RY AL GGK++R LV Sbjct: 20 WRARVEQALDYWLPEAQTH-----PARLHQAMRYSALSGGKRLRPILVFATGQALGAAPT 74 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A+ECIH YSLIHDDLP+MD+ +RRG+PT H +DE TAI+AG+ L T AF I Sbjct: 75 LLDGPACAVECIHAYSLIHDDLPAMDDDELRRGQPTCHKAFDEATAILAGDALQTLAFHI 134 Query: 131 ISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187 ++ +++ R +++ L G +GM GGQ +D+ +D Q+ + KTGA Sbjct: 135 LAHDPGGVQNSRARLRMVEVLALAAGSRGMAGGQAIDLAATGQQLDVAQLEDMHIHKTGA 194 Query: 188 LMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + + GA+ A + +RL +G+ +G+ FQ+ DD+LD E + Sbjct: 195 LIRASVQLGALAASPVDEELLQRLDHYGKCIGLAFQIRDDILDVEGETE 243 >gi|299537767|ref|ZP_07051056.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1] gi|298726746|gb|EFI67332.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1] Length = 293 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 89/242 (36%), Positives = 137/242 (56%), Gaps = 14/242 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L ++ N+ +I+ + L+ Q + L ++ Y+L GGK+IR V Sbjct: 1 MNEPLKYFIESNTPQIEETMFSLVEQIDAPAD------LKESMLYSLKAGGKRIRPLFVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L+ N L VG+ IE IH YSLIHDDLPSMDN RRGKPT H Y E A +A Sbjct: 55 AVLELYRENLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 G+ L T AF I++ + + R +L+ L+ G +GM+GGQ+LD++ E ++ ++ Sbjct: 115 GDALNTLAFGILA--RMDIAAEKRIELVQLLSIAAGAEGMVGGQVLDMEGEQRQLNLAEL 172 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234 + KTGAL+ F+ E+GA++A S ++ L+ + ++G+ FQ+ DD+LD E +L Sbjct: 173 EQVHVNKTGALLRFSIEAGAVLADVSAQDRATLKEYAHHIGLAFQIQDDILDIEGTTEEL 232 Query: 235 PK 236 K Sbjct: 233 GK 234 >gi|299822995|ref|ZP_07054881.1| geranyltranstransferase [Listeria grayi DSM 20601] gi|299816524|gb|EFI83762.1| geranyltranstransferase [Listeria grayi DSM 20601] Length = 293 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 88/235 (37%), Positives = 131/235 (55%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L L+ + + +D + LL + + + T L A+RY+L GGK+IR L+ Sbjct: 4 LEQFLKTSKQLVD---EQLLAEVDARVIT---PTLKKAMRYSLEAGGKRIRPILLFATLI 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + AA+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+GL Sbjct: 58 SLRTELEKGKKTAAALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDATAILAGDGL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ 181 LT AF ++S + L R +L+ + G +GM+ GQ DI +D + ++ I Sbjct: 118 LTLAFSLLSEEEA-LPAESRVKLIQLFAEHAGPEGMVAGQQADIEAEDRSVTLEELAAIH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL+ A +GAI+A+A E+L + +N+G+ FQ+ADD+LD D K Sbjct: 177 RKKTGALLKSAVLAGAIIANADAETYEKLNIYADNIGVAFQIADDILDVVGDEQK 231 >gi|229530007|ref|ZP_04419397.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] gi|229333781|gb|EEN99267.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] Length = 294 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD+ E I + Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|295116024|emb|CBL36871.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium SM4/1] Length = 298 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 12/236 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L +L + ++ + I+ L Q +T H + A+ Y++ GGK++R L+ E Sbjct: 2 ELKEQLLQYTRETEEIVYSYLPQ-----ETGHQKTIFEAMNYSVRAGGKRLRPLLMREVY 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+ Sbjct: 57 RLFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 LL YA E S D + + + + L+ G+ GM+GGQ +D++ ++ + + Sbjct: 117 LLIYAVETASRAFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREK 176 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I ++KTGAL+ + GA++A AS+ E + + N+G+ FQ+ DD+LD Sbjct: 177 LDFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTG 232 >gi|254824578|ref|ZP_05229579.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194] gi|293593816|gb|EFG01577.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194] Length = 293 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 86/228 (37%), Positives = 130/228 (57%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 ++ ++D+ L + + + RL ++ Y++ GGK+IR LV VN L Sbjct: 7 FLEQYKKVIDESLFKEINERNIE--PRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I Sbjct: 65 LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 ++ + L R L+ ++ + G +GM+GGQ+ D++ E + ++ I KTG L Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + FA S A +A A + +RLR F EN+GI FQ++DD+LD D K Sbjct: 184 LIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|225025925|ref|ZP_03715117.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353] gi|224956711|gb|EEG37920.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353] Length = 297 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 84/241 (34%), Positives = 132/241 (54%), Gaps = 13/241 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + +L + ++I+ +D L + +T +LSA+ Y++ GGK++R L+ E Sbjct: 3 SIKEQLSKKIEKIEQTIDFYLPEEKGLQKT-----VLSAMNYSVKAGGKRLRPMLMAETY 57 Query: 63 SLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +F + + AAIE IH YSLIHDDLP++DN +RRG PT HI++ E AI+AG+ Sbjct: 58 EMFGGADSSVIEPFMAAIEMIHTYSLIHDDLPALDNDALRRGMPTAHIKFGEAMAILAGD 117 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLD--IQDEFIDETQVF 178 LL YAFE + +I++ L + T G+ GM+GGQ +D +++ I + Sbjct: 118 ALLNYAFETAAKAFDGTNKDIQTAKALQILTRKPGIYGMIGGQTVDVEQENKAISFDTLM 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235 I KT AL+ A GA++A AS+ E + +GI FQ+ DD+LD E++ Sbjct: 178 YIHNNKTAALIECAMMIGAVLAGASEKEVSMIEQIANKVGIAFQIEDDILDVVSTSEEIG 237 Query: 236 K 236 K Sbjct: 238 K 238 >gi|189485328|ref|YP_001956269.1| geranyltranstransferase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287287|dbj|BAG13808.1| geranyltranstransferase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 297 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 82/248 (33%), Positives = 126/248 (50%), Gaps = 22/248 (8%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 N + + + I+ +L L + S + +RY+ L GGK++R LV Sbjct: 3 NIDFKKYILQKVEYINLVLKKFLPKDNSVVSQG--------MRYSVLAGGKRLRPVLVIL 54 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A LF V + AIE +H YSLIHDDLP+MDN +RRG H ++ E AI+ G Sbjct: 55 AAELFGVKAENVIPAACAIEYLHTYSLIHDDLPAMDNDDLRRGISANHKKFGEAAAILCG 114 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE------ 174 + LLT +F +I+ K+ K+ ++ + L + G +GM+ GQ DI + Sbjct: 115 DALLTESFSLITKSKSSEKN--INEAVRILAYYGGYKGMIAGQTEDILETGKWSKKNKIL 172 Query: 175 --TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ IQ KT ALM + + GA++A A + + L +G+N GI FQ+ DD+LD Sbjct: 173 LGEKIKFIQIQKTAALMIASLKIGAVLAGADKEGLKALEVYGKNAGIAFQIVDDILDVYA 232 Query: 233 D---LPKK 237 D L K+ Sbjct: 233 DKKLLGKE 240 >gi|292492812|ref|YP_003528251.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4] gi|291581407|gb|ADE15864.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4] Length = 296 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 74/227 (32%), Positives = 120/227 (52%), Gaps = 9/227 (3%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLT 71 R + L+ +L RL A+RYA+LGG K++R LV + Sbjct: 12 QARTERALEQVLPPADKP-----PKRLHEAMRYAVLGGGKRLRPLLVYSTGMALGASEAV 66 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 +A+E IH YSL+HDDLPSMDN +RRG+PT H +DE TA++ G+ L + AF I+ Sbjct: 67 LDAPASAVELIHAYSLVHDDLPSMDNDDLRRGRPTCHKAFDEATALLVGDALQSLAFRIL 126 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189 + + L + + ++++ L +GM GGQ +D++ + + ++ + ++KTGAL+ Sbjct: 127 ADSTSGLPASNQIKMLMLLAEAASSRGMAGGQAIDLESVGQLLTLAELETMHRLKTGALI 186 Query: 190 CFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GA + E L F + +G+ FQ+ DD+LD E D Sbjct: 187 RASVLLGAWCHPTIDPHTLENLDRFAQCIGLAFQIQDDVLDVESDTA 233 >gi|15640906|ref|NP_230537.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|153823688|ref|ZP_01976355.1| geranyltranstransferase [Vibrio cholerae B33] gi|229510825|ref|ZP_04400304.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229517946|ref|ZP_04407390.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229608524|ref|YP_002879172.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|254848025|ref|ZP_05237375.1| geranyltranstransferase [Vibrio cholerae MO10] gi|255744681|ref|ZP_05418632.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262161186|ref|ZP_06030297.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1] gi|9655345|gb|AAF94052.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126518791|gb|EAZ76014.1| geranyltranstransferase [Vibrio cholerae B33] gi|229344661|gb|EEO09635.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229350790|gb|EEO15731.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229371179|gb|ACQ61602.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|254843730|gb|EET22144.1| geranyltranstransferase [Vibrio cholerae MO10] gi|255737712|gb|EET93106.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262028936|gb|EEY47589.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1] Length = 294 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD+ E I + Sbjct: 112 GDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|254829880|ref|ZP_05234535.1| hypothetical protein Lmon1_00925 [Listeria monocytogenes 10403S] Length = 293 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 ++ ++D+ L + + + RL ++ Y++ GGK+IR LV VN L Sbjct: 7 FLEQYKKVIDESLFKEINERNIE--PRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPL 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I Sbjct: 65 LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSI 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGAL 188 ++ L R L+ ++ + G +GM+GGQ+ D++ E + ++ I KTG L Sbjct: 125 LAEDDN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKHVTLEELSSIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +A S A +A A + +RLR F EN+GI FQ++DD+LD D K Sbjct: 184 LIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599] gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599] Length = 322 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 78/239 (32%), Positives = 121/239 (50%), Gaps = 8/239 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 L + + + ++ L L + DRL A+RYA+LGG K++R LV Sbjct: 21 LQAWMHACAAHVEEALAARLPGPSGQAPGLAPDRLHEAMRYAVLGGGKRVRPLLVYAAGE 80 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + A+E IH YSL+HDD+P+MDN +RRGKPTVH QY E A++ G+ L Sbjct: 81 LVGADARVLDGAACAVELIHVYSLVHDDMPAMDNDDMRRGKPTVHRQYGEAMAMLVGDAL 140 Query: 124 LTYAFEIISSPKTQLKDNI----RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 AFE++ +P + + ++ L G GM GGQ LDI+ + Q+ Sbjct: 141 QALAFEVLVAPLVEADPQAARVPAATMVAVLARAAGSWGMAGGQALDIEGVGLRLSRPQL 200 Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + KTGA++ + E G + S + E ++ +G +G+ FQ+ DD+LD D Sbjct: 201 EAMHRAKTGAMLSVSVELGLLAGGQPSADLAEAMQRYGRAIGLAFQVVDDILDVTADSA 259 >gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC 2396] gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC 2396] Length = 299 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 86/236 (36%), Positives = 121/236 (51%), Gaps = 10/236 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 L Q N +ID L +LL + RL A+ Y L GGK++R L+ Sbjct: 5 TDSLDDFFQRNRAQIDQALANLLPEPEGPKA-----RLNEAMGYCVLNGGKRVRPLLLLA 59 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + AL A+E IH YSL+HDDLP+MD+ +RRGKPT HI YDE TAI+ G Sbjct: 60 TTEALGGDLQQALPACCAVELIHAYSLVHDDLPAMDDDSLRRGKPTCHIAYDEATAILVG 119 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 +GL T AF ++ + Q++ L G QGM+GGQ +DI E + ++ Sbjct: 120 DGLQTLAFSALTES-SGASAESVLQMVRELARASGHQGMVGGQAIDIYSEGHTLKLEELE 178 Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTGAL+ + GA+ + A E LR F +G+ FQ+ DD++D E D Sbjct: 179 RMHLEKTGALIEASIVLGALASGRADAECIEGLRRFARAIGLAFQVRDDIIDVESD 234 >gi|254852589|ref|ZP_05241937.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503] gi|300765397|ref|ZP_07075379.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017] gi|258605902|gb|EEW18510.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503] gi|300513834|gb|EFK40899.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017] Length = 293 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 ++ ++D+ L + S + RL ++ Y++ GGK+IR LV VN L Sbjct: 7 FLEQYKKVIDESLFKEISERNIE--PRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I Sbjct: 65 LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 ++ + L R L+ ++ + G +GM+GGQ+ D++ E + ++ I KTG L Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTIEELSSIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + FA S A +A A + +RLR F EN+GI FQ++DD+LD D K Sbjct: 184 LIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|260893255|ref|YP_003239352.1| Polyprenyl synthetase [Ammonifex degensii KC4] gi|260865396|gb|ACX52502.1| Polyprenyl synthetase [Ammonifex degensii KC4] Length = 286 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 L E ++ I+ LD L + + ++RY++LGG K++R L+ A Sbjct: 7 LAEKARLIEEALDRYLPPEFAP-----PHPIHQSMRYSVLGGGKRLRPALLLGAAEAVGA 61 Query: 68 N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + L IE IHCYSL+HDDLP+MDN RRG+PT H + E AI+ G+ LLT Sbjct: 62 DVAEDLLLAACGIELIHCYSLVHDDLPAMDNDDFRRGRPTSHRVFGEAIAILTGDALLTL 121 Query: 127 AFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQK 182 FE+++ + + ++++ + G +GM+GGQ+LD+ + + I + Sbjct: 122 GFELLARAALVARQGSEVGLRVIVEVARAAGSEGMVGGQVLDLGGSKNADPALLLEEIHR 181 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL A +GA++ A + ++L + E LG+ FQ+ DD+LD +E+ Sbjct: 182 KKTGALFVAAVRAGALLGGAQEEALQKLTLYAEELGLAFQIVDDILDLDEEAK 234 >gi|70726395|ref|YP_253309.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435] gi|68447119|dbj|BAE04703.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435] Length = 293 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 91/234 (38%), Positives = 134/234 (57%), Gaps = 10/234 (4%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64 + E +I++ LD ++ + N L +++Y+L GGK+IR LV + Sbjct: 3 KKSMNELINQINSALDGVIE------TSPLNTNLEESMQYSLNAGGKRIRPLLVFLTLDV 56 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N ++ + A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ LL Sbjct: 57 LNQDYKKGKKTALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALL 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182 T AFEII+ + L+ +++ +++ L HN G GM+GGQ LD+Q E +D + I K Sbjct: 117 TKAFEIIADDEL-LESDVKVKILSRLAHNSGHLGMVGGQTLDMQSEDKPVDLDTLEQIHK 175 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTGAL+ FA S A +A ++ + L F ++G++FQ+ DDLLD D K Sbjct: 176 AKTGALLQFAVLSAADIAKVDKSTSQALEDFSNHMGLMFQIKDDLLDVYGDESK 229 >gi|304312212|ref|YP_003811810.1| Polyprenyl synthetase [gamma proteobacterium HdN1] gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1] Length = 297 Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 9/237 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M L + LQ R++T L+ + + +L A+ YA++ GGK++R L Sbjct: 1 MTFDLHAYLQTAQFRVNTRLEYWFAKQNTTAA-----KLSEAMHYAVMNGGKRLRPVLAF 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A A+E +H YSL+HDDLP+MDN +RRG PT HI +DE TAI+A Sbjct: 56 AAAEACGTDASLANDAACALEMLHSYSLVHDDLPAMDNDALRRGVPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L AFE+++S + + I+ +++ SL G GM GGQ LD+ +D Sbjct: 116 GDALQCLAFEVLASSELPSMTTPIKLEMIRSLAVASGTHGMAGGQALDLAASGKLLDLHG 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + I ++KTG L+ A GA+ AHA ++ L + LG+ +Q+ DD+LD D Sbjct: 176 LETIHRLKTGCLIRAAVRLGALAAHAPESSLLALDQYASALGLAYQVQDDILDVTGD 232 >gi|323498628|ref|ZP_08103620.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio sinaloensis DSM 21326] gi|323316326|gb|EGA69345.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio sinaloensis DSM 21326] Length = 294 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 84/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N+ +++ L+ L L+ A+RY LLGGK+ R FLV Sbjct: 1 MQEALTSLQQRNNAQLEAWLNTL---------PHQQQPLIEAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCTLEELDTPAAAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF I++ R +++ +L G GM GQ LD ++ + + Sbjct: 112 GDALQTLAFTILADGHLNPDAQAQRIKMVKALAEASGAAGMCMGQALDLAAENRDVSLQE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + + +G+ FQ+ DD+LD D Sbjct: 172 LEEIHRNKTGALMKCAIRLGAMAAGSKGVEVLPLLDKYADAIGLAFQVQDDILDIISDTE 231 >gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200] gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200] Length = 296 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F L A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGLGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230 >gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134] gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842] gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222] gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407] gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185] gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2] gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W] gi|74489206|gb|EAO52676.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134] gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842] gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W] gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2] gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185] gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407] gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str. T04001] gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222] gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis CT-43] Length = 296 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230 >gi|291525241|emb|CBK90828.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale DSM 17629] gi|291529300|emb|CBK94886.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale M104/1] Length = 307 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 123/237 (51%), Gaps = 12/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 +LQ+ + I+ +L+ L + + A+ Y++ GGK++R L+ E Sbjct: 10 SQFMEELQQKVEHINDVLEKFLPAEEGQQRI-----IFEAMNYSVRAGGKRLRPILMEET 64 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +F + AAIE IH YSL+HDDLP+MDN RRGK T H Y E I+AG+ Sbjct: 65 YHMFGGSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGD 124 Query: 122 GLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-----FIDET 175 LL A+E + ++ D ++ L G+ GM+GGQ++D++ E I Sbjct: 125 ALLNLAYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITRE 184 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ I ++KTGAL+ + GAI+A AS +E R+ LG+ FQ+ DD+LD Sbjct: 185 KLDFIYRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTS 241 >gi|6466227|gb|AAF12843.1|AF203881_16 geranyltransferase [Zymomonas mobilis subsp. mobilis ZM4] Length = 298 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 147/240 (61%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M L + +++ ++ ID + + L + RL+ A+RYA + GGK++R LV Sbjct: 1 MAVNLKTMMEQVAQDIDRLFAEQLP-----VPEDPRRRLVEAMRYAAIGGGKRLRPLLVV 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +LFNV+ ALRVG AIECIH YSLIHDD+P MDN +RRGKPTVH +D+ +A+++ Sbjct: 56 ATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLS 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175 G+ L AFEI+S K ++R +L+ +L GM+GGQ +D+ E D Sbjct: 116 GDALQALAFEILSEEKIHTDPHVRLELIQALLSPPVKDGMVGGQAIDLAAETSTVPFDLP 175 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +Q++KTGAL F E+GAIM +++ ++RL+ + ++G+ FQ+ADDL+D E D Sbjct: 176 TITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEA 235 >gi|167855502|ref|ZP_02478265.1| geranyltranstransferase [Haemophilus parasuis 29755] gi|167853368|gb|EDS24619.1| geranyltranstransferase [Haemophilus parasuis 29755] Length = 297 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 86/237 (36%), Positives = 130/237 (54%), Gaps = 11/237 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN L ++L + +RI+ L + L Q +N L+ A+ YA LLGGK++R FL+ Sbjct: 1 MNYDLFAELSQYQQRINHFLSEQLSQY-----PAYNTPLIDAMSYAVLLGGKRVRPFLIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + V A+E IH YSL+HDDLP+MDN +RRGKPT HI +DE TAI+A Sbjct: 56 ATGKMLGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ L ++AFE+++ L + M L + G +GM GQ LD+Q E I ++ Sbjct: 116 GDALQSFAFELLA-FDPSLTAEQKVAQMQWLAKSAGAKGMCLGQSLDLQSEHKAIALDEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I + KTGAL+ + G ++ K++L + + +G+ FQ+ DD+LD Sbjct: 175 ERIHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAKAIGLAFQVQDDILDVIG 231 >gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1] gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1] Length = 295 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 8/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + + R + + LL QT RL +A+RY++L GGK++R L Sbjct: 2 SDFLSWVSIHQSRFEDAVGRLLPQTD-----VLPQRLHAAMRYSVLEGGKRVRPLLAYAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L AA+E IH YSL+HDD+P MD+ +RRGKPT HI+YDE TA++ G+ Sbjct: 57 GELAGAPIERVEIAAAAVELIHAYSLVHDDMPCMDDDVLRRGKPTCHIEYDEATALLVGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179 L + AF+++S + + + Q++ L G +GM GGQ +D+ ++ Sbjct: 117 ALQSLAFQLLSEHRLSDDPSRQLQMVRLLAAASGSRGMAGGQAIDLASVGKQLAMPELEQ 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ A GA Q + ++L +G+ +G+ FQ+ DD+LD E D Sbjct: 177 MHIYKTGALIRAAILLGAHCGKLDQAQLDKLDRYGKCIGLAFQVVDDVLDSEADTA 232 >gi|295090870|emb|CBK76977.1| Geranylgeranyl pyrophosphate synthase [Clostridium cf. saccharolyticum K10] Length = 298 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 12/236 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L +L + ++ + I+ L Q +T H + A+ Y++ GGK++R L+ E Sbjct: 2 ELKEQLLQYTRETEEIVYSYLPQ-----ETGHQKTIFEAMNYSVRAGGKRLRPLLMREVY 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+ Sbjct: 57 RLFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 LL YA E S D + + + + L+ G+ GM+GGQ +D++ ++ + + Sbjct: 117 LLIYAVETASRAFLSGADAVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREK 176 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I ++KTGAL+ + GA++A AS+ E + + N+G+ FQ+ DD+LD Sbjct: 177 LDFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTG 232 >gi|262402761|ref|ZP_06079322.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] gi|262351543|gb|EEZ00676.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] Length = 294 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 88/240 (36%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q NS+++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNSQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+ Sbjct: 52 ITGQMLGCELNELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD+ E + + Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + + +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYADAVGLAFQVQDDILDIISDTE 231 >gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp. lyrata] gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp. lyrata] Length = 360 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 83/244 (34%), Positives = 125/244 (51%), Gaps = 17/244 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + +K ++ LD + + + A+RY+LL GGK++R L Sbjct: 64 FDFKSYMINKAKSVNAALD-------ISVPLREPLTVQEAVRYSLLAGGKRVRPMLCIAS 116 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L N TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 117 CELVGGNEATAMPAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGD 176 Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL AFE ++ + L R + + L IG G++ GQM+D+ E ++ Sbjct: 177 ALLALAFEHMTVVSSGLVPPERMIRAVAELARAIGTTGLVAGQMIDLASERLNPHDAGLE 236 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 ++ I KT AL+ A G IM ++ E E+LR + +G++FQ+ DD+LD E Sbjct: 237 RLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTE 296 Query: 233 DLPK 236 +L K Sbjct: 297 ELGK 300 >gi|127513698|ref|YP_001094895.1| polyprenyl synthetase [Shewanella loihica PV-4] gi|126638993|gb|ABO24636.1| farnesyl-diphosphate synthase [Shewanella loihica PV-4] Length = 293 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 91/238 (38%), Positives = 132/238 (55%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L + +R+D L + + Q +L +A+ + AL+GGK+IR FLV Sbjct: 2 LNEAITRYQQRVDGQLRHFI-----NAQDDTEPQLKAAMEHGALIGGKRIRPFLVYAVGE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI ++E TAI+AG+ L Sbjct: 57 MLGVPLERLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFNEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 T AFEIIS +L + + ++ +L G GM GGQ +D+ D ID + + Sbjct: 117 QTLAFEIISQEGGELSASQQLAMVRALAKASGYSGMCGGQAMDLNATDRQIDLETLKRLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 ++KTGAL+ A E I A + + L F + +G+ FQ+ DD+LD E+L K Sbjct: 177 RLKTGALIRCAVELPIIAAKVTDEQASHLLTFADAIGLAFQVQDDVLDIIASTEELGK 234 >gi|269121046|ref|YP_003309223.1| polyprenyl synthetase [Sebaldella termitidis ATCC 33386] gi|268614924|gb|ACZ09292.1| Polyprenyl synthetase [Sebaldella termitidis ATCC 33386] Length = 290 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 85/235 (36%), Positives = 135/235 (57%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L L+E + + L + + + ++ +RL ++ Y+++ GGK++R L+ A Sbjct: 2 LKIYLKEKREIFEKYLQEKMTEL------KYPERLAESMIYSVMNGGKRLRPVLMYMIAD 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +FN ++ AA+ECIH YSL+HDDLP+MD+ RRGK T H ++DE TAI+AG+ L Sbjct: 56 IFNQDYSRIEDTAAALECIHSYSLVHDDLPAMDDDTYRRGKLTTHKKFDEATAILAGDAL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LTYAF +IS+ + ++++ + ++ L+ G+ GM+GGQ +D++ E I + I Sbjct: 116 LTYAFYVISASEK-IENSGKVNIIRILSDYSGINGMVGGQYVDMESENKEISFDTLKYIH 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTG L+ A E +KE L + E +GI FQ+ DDLLD E D K Sbjct: 175 SHKTGKLLKAAVELPLEALAIEGKQKEVLLEYSELIGIAFQIKDDLLDIEGDFEK 229 >gi|217964491|ref|YP_002350169.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Listeria monocytogenes HCC23] gi|217333761|gb|ACK39555.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Listeria monocytogenes HCC23] gi|307570945|emb|CAR84124.1| geranyltranstransferase [Listeria monocytogenes L99] Length = 293 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 ++ I+D+ L + S + + L ++ Y++ GGK+IR LV VN L Sbjct: 7 FLEQYKKIIDESLFKEISERKIE--PTLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I Sbjct: 65 LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 ++ + L R L+ ++ + G +GM+GGQ+ D++ E + ++ I KTG L Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + FA S A +A A + +RLR F EN+GI FQ++DD+LD D K Sbjct: 184 LIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 296 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230 >gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876] gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876] Length = 296 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 82/236 (34%), Positives = 133/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPSVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230 >gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212] gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212] Length = 297 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 122/236 (51%), Gaps = 9/236 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 MN S RI+T L+ L +RL A+RY++LGG K++R L Sbjct: 1 MNPDFQSWAAACQARIETFLETRLPAADC-----VPERLHKAMRYSVLGGGKRVRPLLSF 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L + V AA+E IH YSL+HDDLP MD+ +RRGKPT H++YDE TA++ Sbjct: 56 AAGELVAADLERVTVVAAAVELIHAYSLVHDDLPCMDDDILRRGKPTCHVEYDEATALLT 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177 G+ L T AFE+++ + Q++ L G +GM GGQ LD + + ++ Sbjct: 116 GDSLQTLAFELLAEKPLADIPETQLQMIAQLALASGSRGMAGGQAFDLDSVGKMLSLPEL 175 Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA + + + +L F + +G+ FQ+ DDLLD E Sbjct: 176 EFMHIHKTGALIRAAVMLGARCSSCLNDEQLAQLDHFAKCVGLAFQVVDDLLDTEA 231 >gi|332283715|ref|YP_004415626.1| geranyltranstransferase [Pusillimonas sp. T7-7] gi|330427668|gb|AEC19002.1| geranyltranstransferase [Pusillimonas sp. T7-7] Length = 304 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 127/240 (52%), Gaps = 17/240 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62 P L + + I+ +LD +L Q +T + L A+RYA+LGG K++R+ LV Sbjct: 7 DFPIWLDDRVQHIEAVLDQVLPQ-----ETVVPESLHEAMRYAVLGGGKRVRAALVYAAG 61 Query: 63 SLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115 + + AA+E IH YSLIHDDLP MD+ +RRG+PTVH+++ E T Sbjct: 62 EAALQSGTPASAQQIGLDHAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTVHVRFSEAT 121 Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--D 173 A++AG+ L AFE++ + + Q L + G GM+GGQ +D + + Sbjct: 122 AMLAGDALQPLAFELLG--LMPIAPALIVQATQLLARSAGSLGMVGGQAIDCESVGVALS 179 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + Q+ + MKTGA++ + G I+A A ++ L + +G+ FQ+ DD+LD D Sbjct: 180 KEQLQQMHSMKTGAMLEASVLLGGIVAGAGSAVRQGLEDYATAIGLAFQVVDDILDVTAD 239 >gi|304395483|ref|ZP_07377366.1| Polyprenyl synthetase [Pantoea sp. aB] gi|304356777|gb|EFM21141.1| Polyprenyl synthetase [Pantoea sp. aB] Length = 299 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 L ++++ L + + L++A+ Y ALLGGK++R FLV Sbjct: 2 DFARLLDVYQQQVNAALTRFIEPL-----PFQSSPLVNAMHYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI+Y E TAI+AG+ Sbjct: 57 EMLHADPASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116 Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ + R ++ L G+ GM GGQ LD+ E +D Q+ Sbjct: 117 LQTLAFSILADEAMPGVSAEYRLMMLSELAKASGVAGMCGGQALDLAAEGKSVDLDQLEQ 176 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A A + L + E +G+ FQ+ DD+LD D + Sbjct: 177 IHRHKTGALIRSAVRLGALTAGDAGREALPLLDRYAEAIGLAFQVQDDILDVVGDTAVIG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|39933601|ref|NP_945877.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009] gi|39647447|emb|CAE25968.1| putative geranyltranstransferase (farnesyl-diphosphate synthase) [Rhodopseudomonas palustris CGA009] Length = 308 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 105/237 (44%), Positives = 145/237 (61%), Gaps = 5/237 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 +L ++ + +L LL + RL+ AIRY+ L GGK++R FL E A Sbjct: 9 DFAKRLDTTAEETEALLGRLLSDELMSDEIARPRRLMDAIRYSTLGGGKRLRPFLAVESA 68 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F ++ AL VGAA+ECIHCYSLIHDDLPSMDN +RRG+PT+H YD+ TAI+AG+ Sbjct: 69 AVFGIDRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDA 128 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178 LLT+AF+I++ + +R L L GL GM+GGQMLD+ E + V Sbjct: 129 LLTFAFDIVTRDEVHNDPTVRLLLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVA 188 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q+MKTGAL+ + C +GAI+ AS ++ L +G LG FQ+ADDLLD E D Sbjct: 189 RLQQMKTGALLRYGCVAGAILGQASPDQYRALDDYGRALGEAFQIADDLLDVEGDAA 245 >gi|58696945|ref|ZP_00372440.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila simulans] gi|58699606|ref|ZP_00374302.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila ananassae] gi|225630859|ref|YP_002727650.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi] gi|58533876|gb|EAL58179.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila ananassae] gi|58536823|gb|EAL60043.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila simulans] gi|225592840|gb|ACN95859.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi] Length = 263 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 9/212 (4%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+++ + ++L+SA+RY LL K IRSFLV + +FN + V AAIE Sbjct: 10 LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H YSLIHDDLP MDN RR + + H ++DE TA++AG+ LLT AFE++SS + Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSL-----NE 124 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 R +++ L+ IG++GM+GGQ LDI D ++ I MKT L +CE GAI+ Sbjct: 125 KRCEIIKVLSQAIGIRGMVGGQALDI---DTDFNKIKEIHLMKTAKLFAASCEIGAIIGG 181 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A+ ++ L FG NLG+IFQ DD+ D E+D Sbjct: 182 ATDEQRRALYNFGINLGLIFQAKDDIEDYEQD 213 >gi|254502825|ref|ZP_05114976.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] gi|222438896|gb|EEE45575.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11] Length = 301 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 109/235 (46%), Positives = 150/235 (63%), Gaps = 3/235 (1%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S L + RI+T L LL +T + +RL++A+R+ AL GGK++R LV Sbjct: 1 MTFDLKSHLAAQAGRIETALTSLLKETERDGEISRPERLINAMRHGALNGGKRLRPVLVM 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + A LF ++ G A+E IHCYSL+HDDLP+MD+ +RRG+PTVH YD+ TAI+A Sbjct: 61 DAAGLFGRADDGVVQAGCALELIHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDDATAILA 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177 G+ LLT AF++I+ + IR +L L G+ GM GGQMLD++ E D E ++ Sbjct: 121 GDALLTLAFDVITDEAVHPEAGIRLRLCRELARASGIGGMAGGQMLDLESEHRDRSEAEI 180 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q MKTGAL+ +AC +GAI+ AS + ERL FGE +G+ FQLADDLLD E Sbjct: 181 RHLQSMKTGALLRYACRAGAILGDASDADVERLTRFGEIIGLAFQLADDLLDVEA 235 >gi|77361281|ref|YP_340856.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas haloplanktis TAC125] gi|76876192|emb|CAI87414.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas haloplanktis TAC125] Length = 295 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 85/202 (42%), Positives = 122/202 (60%), Gaps = 4/202 (1%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 ++ + +A Y+L+ GGK++R FLV + + + AAIECIH YSL+HDDLP+ Sbjct: 29 DETIKAATHYSLMNGGKRLRPFLVYATGKMLGADKQDLDVLAAAIECIHSYSLVHDDLPA 88 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRG+PT HI Y E AI+AG+ L AFE+I+ + +++ L H Sbjct: 89 MDDDELRRGRPTCHIVYGEAHAILAGDALQALAFELIAKHNFNCSAQAQVKMIAELAHAS 148 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLR 211 GLQGM+ GQ LDI D+ I ++ I K+KTGAL+ A GA+ + + SQN E L Sbjct: 149 GLQGMVAGQGLDIAATDKVITVAELERIHKLKTGALISCAITLGALCSNNVSQNTLENLA 208 Query: 212 CFGENLGIIFQLADDLLDCEED 233 FG +G+ FQ+ DD+LD E D Sbjct: 209 TFGYAIGLAFQVHDDILDVEGD 230 >gi|87200267|ref|YP_497524.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM 12444] gi|87135948|gb|ABD26690.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM 12444] Length = 303 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 101/236 (42%), Positives = 139/236 (58%), Gaps = 8/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61 G L L ++ ID D LL + DRL+ A+RYA + GGK++R LV Sbjct: 10 GLLKPALAAIAEDIDRSFDLLLP-----VPGDPRDRLVEAMRYAAIGGGKRLRPLLVCAT 64 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +L V+ A+RVG AIE IH YSLIHDDLP MDN +R GKPTVH+ +D+ TA++AG+ Sbjct: 65 GALHGVSREAAVRVGTAIEAIHVYSLIHDDLPCMDNDGLRHGKPTVHVAFDDATAVLAGD 124 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L +AFE++S P T R +L+ +L G+ GM GGQM+DI E D V Sbjct: 125 ALHDFAFEVLSDPATSGDPFTRIELIRTLATASGMNGMCGGQMMDIVAETSSFDLPTVTR 184 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q++KTGAL+ + E GAI+ + LR + ++G+ FQ+ADDLLD E D Sbjct: 185 LQQLKTGALLGASVELGAILGKVPPEGRTHLRGYARDIGLAFQIADDLLDAEGDEA 240 >gi|145298029|ref|YP_001140870.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850801|gb|ABO89122.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida A449] Length = 296 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 87/230 (37%), Positives = 123/230 (53%), Gaps = 6/230 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67 L + S+ +DD L + RL A+RY LLGGK++R FLV + V Sbjct: 3 LDDFSRLHRQRIDDCLSAQLESLPA-MAPRLRDAMRYGLLLGGKRVRPFLVYAVGEMLGV 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AA+ECIH YSL+HDDLP+MDN +RRG+PTVH +DE TAI+AG+ L T A Sbjct: 62 KRELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLA 121 Query: 128 FEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 F I++ + R +++ +L G GM GGQ LD+Q E I ++ + + K Sbjct: 122 FSILADHPLPDRLLANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLPELEQVHRHK 181 Query: 185 TGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 TGAL+ A GA+ A L+ + +G+ FQ+ DD+LD D Sbjct: 182 TGALIECAVALGALCKADVDDTTLAALQTYAAAIGLAFQVQDDILDITGD 231 >gi|315282228|ref|ZP_07870682.1| geranyltranstransferase [Listeria marthii FSL S4-120] gi|313614130|gb|EFR87820.1| geranyltranstransferase [Listeria marthii FSL S4-120] Length = 293 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 87/231 (37%), Positives = 129/231 (55%), Gaps = 6/231 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L + ++D+ L + S + +L ++ Y++ GGK+IR LV N Sbjct: 4 LTVFLEHYKKVIDESLFKEISVRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNA 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + L +R A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT A Sbjct: 62 DPLLGVRTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKIFGDATAILAGDALLTLA 121 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F I++ + L R L+ ++ + G +GM+GGQ D++ E + ++ I KT Sbjct: 122 FSILAEDEN-LSFETRLALIKEISFSSGAEGMVGGQQADMEAENKQVTLEELSSIHARKT 180 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 G L+ FA S A +A A + +RLR F EN+GI FQ++DD+LD D K Sbjct: 181 GELLIFAVTSAAKIAEADSEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|255284124|ref|ZP_05348679.1| geranyltranstransferase [Bryantella formatexigens DSM 14469] gi|255265298|gb|EET58503.1| geranyltranstransferase [Bryantella formatexigens DSM 14469] Length = 295 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 85/239 (35%), Positives = 126/239 (52%), Gaps = 12/239 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 +L + S+ + ++ L +T LL A+ Y++ GGK++R L+ E Sbjct: 3 FKEELAKRSEEVQAVVYAYLPAEEGFQKT-----LLEAMNYSMTAGGKRLRPLLMQETYR 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF N AAIE IH +SL+HDDLP+MDN RRGK T H+ Y E AI+AG+GL Sbjct: 58 LFGGNGKVVEPFMAAIEMIHTHSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDGL 117 Query: 124 LTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 L YA+E N + M LT G+ GMLGGQ +D+Q + ++ I Sbjct: 118 LNYAYETACRAFALEPGNPHIGEAMTVLTTKTGVYGMLGGQAVDVQSVGGTLSREKLDFI 177 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 ++KT AL+ + +GAI+A AS+ E + ++G+ FQ+ DD+LD +L K Sbjct: 178 YRLKTSALIECSMMTGAILAGASEEEIRTIGQVASDVGLAFQIQDDILDVTSTSQELGK 236 >gi|192288955|ref|YP_001989560.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] gi|192282704|gb|ACE99084.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] Length = 308 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 105/237 (44%), Positives = 145/237 (61%), Gaps = 5/237 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 +L ++ + +L LL + RL+ AIRY+ L GGK++R FL E A Sbjct: 9 DFAKRLDTTAEETEALLGRLLSDELMSDEIARPRRLMDAIRYSTLGGGKRLRPFLAVESA 68 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F ++ AL VGAA+ECIHCYSLIHDDLPSMDN +RRG+PT+H YD+ TAI+AG+ Sbjct: 69 AVFGIDRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDA 128 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178 LLT+AF+I++ + +R L L GL GM+GGQMLD+ E + V Sbjct: 129 LLTFAFDIVTRDEVHNDPTVRLLLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVA 188 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q+MKTGAL+ + C +GAI+ AS ++ L +G LG FQ+ADDLLD E D Sbjct: 189 RLQQMKTGALLRYGCVAGAILGQASPDQYRALDDYGRALGEAFQIADDLLDVEGDAA 245 >gi|311693472|gb|ADP96345.1| geranyltranstransferase [marine bacterium HP15] Length = 298 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 82/229 (35%), Positives = 126/229 (55%), Gaps = 11/229 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 L+ R+D LD + + ++ + RL A+RY++LGG K+IR L A Sbjct: 12 LETCRARVDAELDRCITRDSA------SGRLQEAMRYSVLGGGKRIRPALCLAAAKAMGQ 65 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AL ++E IH YSLIHDDLP+MD+ +RRG+PT HI +DE TAI+AG+ L A Sbjct: 66 TGDEALIPACSVELIHAYSLIHDDLPAMDDDELRRGRPTTHIAFDEATAILAGDALQALA 125 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185 F ++ L +++R ++ L G GM+GGQ +D++ + + Q+ + + KT Sbjct: 126 FGWLAEA-PGLSESVRLIMVRELARASGHGGMVGGQAIDLESVGKTLALAQLETMHRHKT 184 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ + GA+ A + L + + LG+ FQ+ DDLLD E D Sbjct: 185 GALIETSVRIGALTAPSVDEQALASLTQYAKALGLAFQVQDDLLDIEGD 233 >gi|212223283|ref|YP_002306519.1| bifunctional short-chain isoprenyl diphosphate synthase [Thermococcus onnurineus NA1] gi|212008240|gb|ACJ15622.1| bifunctional short-chain isoprenyl diphosphate synthase [Thermococcus onnurineus NA1] Length = 342 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 123/238 (51%), Gaps = 17/238 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61 L +++++ +K +D +L L+ + + +L A R Y L GGK++R F+V Sbjct: 5 DELFARVKKMAKSVDDVLFKLIPE-------REPRKLYDAARHYPLAGGKRVRPFVVLRA 57 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A + AL AA+E IH YSL+HDD+ MD +RRG+PTVH + AI+AG+ Sbjct: 58 AEAVGGDPSKALYPAAAVELIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGINMAILAGD 115 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178 L + AFE ++ + + R +L T N + GQ LDI+ E +E + Sbjct: 116 LLFSKAFEAVARAEISPEKKARILEVLVQTSN----ELCEGQALDIEFETREEVTVDEYL 171 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL + GAI+ ++ + L +G N+GI FQ+ DD+LD D K Sbjct: 172 QMISGKTGALFDGSATIGAIVGTDNEEYIQALSKWGRNVGIAFQIWDDVLDLIADEEK 229 >gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Bacillus pumilus ATCC 7061] gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Bacillus pumilus ATCC 7061] Length = 296 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 133/240 (55%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L L + I+ L + + + L S++ Y+L GGK++R LV Sbjct: 1 MTSNLNEFLTTRKQTIEDYLFTYVQELTI------PEDLKSSMLYSLKAGGKRLRPVLVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + N + VG A+E IH YSLIHDDLP MD+ +RRGKPT H Y E TA++A Sbjct: 55 ALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLA 114 Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176 G+ LLT +F +I S + + + + +++ L + G GM+GGQ D++ E + + Sbjct: 115 GDALLTESFRLITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I KTG L+ F+ +GA++A AS ++ E+LR F ++GI FQ+ DD+LD E K Sbjct: 175 LESIHARKTGKLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEK 234 >gi|219870895|ref|YP_002475270.1| geranyltranstransferase [Haemophilus parasuis SH0165] gi|219691099|gb|ACL32322.1| geranyltranstransferase [Haemophilus parasuis SH0165] Length = 297 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 87/237 (36%), Positives = 130/237 (54%), Gaps = 11/237 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN L ++L + +RI+ L + L Q +N L+ A+ YA LLGGK++R FL+ Sbjct: 1 MNYDLFAELSQYQQRINHFLSEQLSQY-----PAYNTPLIDAMSYAVLLGGKRVRPFLIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + V A+E IH YSL+HDDLP+MDN +RRGKPT HI +DE TAI+A Sbjct: 56 ATGKMLGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ L ++AFE+++ L + M L + G +GM GQ LD+Q E I ++ Sbjct: 116 GDALQSFAFELLA-FDPSLTAEQKVAQMQWLAKSAGAKGMCLGQSLDLQSEHKAIALDEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I + KTGAL+ + G ++ K++L + E +G+ FQ+ DD+LD Sbjct: 175 ERIHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAEAIGLAFQVQDDILDVIG 231 >gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325] gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325] Length = 306 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 126/236 (53%), Gaps = 12/236 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 LQ+ +RI+ L L + L+ A+RY LLGGK+IR FLV Sbjct: 15 FSQDLQQVQERINAFLAQQLNLNTA------PSPLIEAMRYGVLLGGKRIRPFLVYATGR 68 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + + A +E IH YSLIHDDLP+MDN +RRG+PT HI +DE TAI+AG+ L Sbjct: 69 MLGADLIQLDYAAAGLEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDEATAILAGDAL 128 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 +AFEI++ L + L+ +L G +GM GQ LD+ E I ++ I Sbjct: 129 QAFAFEILTQAPA-LSAEQKLALVSTLAQASGAKGMCLGQSLDLISEQKQISLAELEQIH 187 Query: 182 KMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ A + G I + + ++L+ + +G+ FQ+ DD+LD E + Sbjct: 188 RNKTGALLTAALQLGFICSPHFGDKTLAQQLQRYSRAIGLAFQVQDDILDIEGESE 243 >gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676] gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676] Length = 296 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKL------VSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230 >gi|16803403|ref|NP_464888.1| hypothetical protein lmo1363 [Listeria monocytogenes EGD-e] gi|224499942|ref|ZP_03668291.1| hypothetical protein LmonF1_09784 [Listeria monocytogenes Finland 1988] gi|224501694|ref|ZP_03670001.1| hypothetical protein LmonFR_04127 [Listeria monocytogenes FSL R2-561] gi|254827624|ref|ZP_05232311.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165] gi|284801748|ref|YP_003413613.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578] gi|284994890|ref|YP_003416658.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923] gi|16410779|emb|CAC99441.1| lmo1363 [Listeria monocytogenes EGD-e] gi|258600002|gb|EEW13327.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165] gi|284057310|gb|ADB68251.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578] gi|284060357|gb|ADB71296.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923] Length = 293 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 ++ ++D+ L + + + RL ++ Y++ GGK+IR LV VN L Sbjct: 7 FLEQYKKVIDESLFKEINERNIE--PRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPL 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I Sbjct: 65 LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSI 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 ++ L R L+ ++ + G +GM+GGQ+ D++ E + ++ I KTG L Sbjct: 125 LAEDDN-LSFETRIALINQISFSSGAEGMVGGQLADLEAENKQVTLEELSSIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +A S A +A A + +RLR F EN+GI FQ++DD+LD D K Sbjct: 184 LIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|254509029|ref|ZP_05121134.1| geranyltranstransferase [Vibrio parahaemolyticus 16] gi|219548064|gb|EED25084.1| geranyltranstransferase [Vibrio parahaemolyticus 16] Length = 294 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 124/240 (51%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q ++++++ LD L L+ A+RY LLGGK+ R FLV Sbjct: 1 MQEALTSLQQRSNQQLERWLDTL---------PHQQQPLIDAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + AAIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGSSLEQLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF I++ + + + R ++ L G GM GQ LD ++ + + Sbjct: 112 GDALQTLAFTILAEGQLSPEAEAQRIMMVKVLAEASGAAGMCMGQALDLAAENRIVSLQE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A L + + +G+ FQ+ DD+LD D Sbjct: 172 LEEIHRNKTGALMKCAIRMGALAAGEKGIEVLPLLDKYADAIGLAFQVQDDILDVISDTE 231 >gi|313608930|gb|EFR84685.1| geranyltranstransferase [Listeria monocytogenes FSL F2-208] Length = 293 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 ++ I+D+ L + S + + L ++ Y++ GGK+IR LV VN L Sbjct: 7 FLEQYKKIIDESLFKEISERKIE--PTLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I Sbjct: 65 LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 ++ + L R L+ ++ + G +GM+GGQ+ D++ E + ++ I KTG L Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQLADMEAESKQVTLEELSSIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + FA S A +A A + +RLR F EN+GI FQ++DD+LD D K Sbjct: 184 LIFAITSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|262172097|ref|ZP_06039775.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] gi|261893173|gb|EEY39159.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] Length = 294 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 88/240 (36%), Positives = 127/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+ Sbjct: 52 ITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ + + R ++ +L G QGM GQ LD+ E + + Sbjct: 112 GDALQTLAFTILAEGTLSPAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAILLHLDRYAEAVGLAFQVQDDILDIISDTE 231 >gi|299143832|ref|ZP_07036912.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518317|gb|EFI42056.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 290 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 8/214 (3%) Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL--TALRVGAAIECIHCYSLI 88 ++ ++ ++ Y+L GGK++R L + + L AIE IH YSLI Sbjct: 27 ADEYQKKVYESMSYSLSSGGKRVRPLLSLLAYKSVSGSEDFTKILPFATAIELIHTYSLI 86 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD----NIRS 144 HDDLP+MDN +RRGKPT H Y E AI+AG+GLL + E++S + + Sbjct: 87 HDDLPAMDNDDLRRGKPTNHKVYSEAIAILAGDGLLNMSAEVMSRELDKYDEMDELKRAI 146 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 + M + G+ GM+GGQ++D++ + ++ + K+KT AL+ A SGAI+A AS Sbjct: 147 KAMKYIFTASGVHGMIGGQVIDMEYGYNMNLDICESMYKLKTAALIKAAIVSGAIIAGAS 206 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 E + +GI +Q+ DD+LD E D K+ Sbjct: 207 DEEIATFEEYANCIGIAYQIRDDILDLEADSKKE 240 >gi|291562669|emb|CBL41485.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium SS3/4] Length = 297 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 78/243 (32%), Positives = 125/243 (51%), Gaps = 12/243 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + + K +T++ L + +T H + A+ Y++ GGK++R L+ Sbjct: 1 MADNFKERFSQAVKETETVVYSYLPE-----ETGHQKTIFEAMNYSVKAGGKRLRPLLMR 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E LF N AA+E IH SLIHDDLP MDN RRGK T Y A++A Sbjct: 56 EVYRLFGGNGPEIKPFMAAMEMIHTSSLIHDDLPCMDNDEYRRGKLTTWKAYGYDMAVLA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 G+ L+ YAFE S + D ++ + + L G+ GM+GGQ +D++ + + + Sbjct: 116 GDALMIYAFETASKAFSMGADPAKAGRAIGILAEKTGIYGMIGGQTVDVELTGKAVPREK 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I ++KTGAL+ + GA++A A+ E + + +G+ FQ+ DD+LD E+ Sbjct: 176 LDFIYRLKTGALLEASMMIGAVLAGATVEEIKEVETMASEVGLAFQIQDDILDVTSTQEE 235 Query: 234 LPK 236 L K Sbjct: 236 LGK 238 >gi|290893528|ref|ZP_06556511.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria monocytogenes FSL J2-071] gi|290556873|gb|EFD90404.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria monocytogenes FSL J2-071] Length = 285 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 87/224 (38%), Positives = 128/224 (57%), Gaps = 6/224 (2%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 I +D+ L + S + + L ++ Y++ GGK+IR LV VN L ++ Sbjct: 3 IKKYIDESLFKEISERKIE--PALKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVK 60 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I++ Sbjct: 61 TATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAED 120 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 + L R L+ ++ + G +GM+GGQ+ D++ E + ++ I KTG L+ FA Sbjct: 121 EN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFA 179 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A A + +RLR F EN+GI FQ++DD+LD D K Sbjct: 180 VTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 223 >gi|225377100|ref|ZP_03754321.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM 16841] gi|225211005|gb|EEG93359.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM 16841] Length = 303 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 82/234 (35%), Positives = 127/234 (54%), Gaps = 10/234 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 + +++Q I+ I+ L + +T ++ A+ Y+ L GGK++R L++E Sbjct: 9 DIRAEIQTRVDEIEQIIKRYLPEEEGWQKT-----IMEAMNYSILAGGKRLRPMLMSETY 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF AA+E IH YSL+HDDLP+MDN RRGK T H Y E I+AG+ Sbjct: 64 RLFGGKSKVIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDA 123 Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178 LL YAFE + DN + M L G+ GM+GGQ++D+Q E I + ++ Sbjct: 124 LLNYAFETAAKAFDMEPDNRNIGKAMQILATKAGIYGMVGGQVVDVQSEDSGDITKEKLD 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I ++KTGAL+ + GA++A A++NE+ + +G+ FQ+ DD+LD Sbjct: 184 FIYRLKTGALIESSMLIGAVLAGATKNEQNTIEKAATEVGLAFQIQDDILDVTS 237 >gi|283834262|ref|ZP_06354003.1| geranyltranstransferase [Citrobacter youngae ATCC 29220] gi|291069784|gb|EFE07893.1| geranyltranstransferase [Citrobacter youngae ATCC 29220] Length = 299 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 89/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ ++ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFTQQLQACVEQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSL+HDDLP+MDN +RRG PT H+++ E AI+AG+ Sbjct: 57 QMFGVSLSTLDAPAAAVECIHAYSLMHDDLPAMDNDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF IIS P ++ D R ++ L G+ GM GGQ LD++ E ++ + Sbjct: 117 LQTLAFSIISDAPMPEVADRDRIAMLSELAQASGIAGMCGGQALDLEAEGHQVELDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A E L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRECLAILDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|57867011|ref|YP_188659.1| geranyltranstransferase [Staphylococcus epidermidis RP62A] gi|293366522|ref|ZP_06613199.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W2(grey)] gi|57637669|gb|AAW54457.1| geranyltranstransferase [Staphylococcus epidermidis RP62A] gi|291319291|gb|EFE59660.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W2(grey)] Length = 293 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +++Y+L GGK+IR ++ + N ++ L A+E IH YSLIHDDLP+MDN Sbjct: 30 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 89 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK T H Y E AI+AG+ LLT AFE++S+ T ++D+++ ++ L+ G Sbjct: 90 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSN-DTTIEDSVKVSIIKRLSKASGHL 148 Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD++ E I + I + KTGAL+ F+ + +A QN + L F Sbjct: 149 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 208 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLD D K Sbjct: 209 HLGMMFQIKDDLLDVYGDESK 229 >gi|254361652|ref|ZP_04977790.1| geranyltranstransferase [Mannheimia haemolytica PHL213] gi|153093170|gb|EDN74186.1| geranyltranstransferase [Mannheimia haemolytica PHL213] Length = 297 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 11/241 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M+ L + L +RI+ L + L T S L+ A+ YA LLGGK++R FL+ Sbjct: 1 MSYLLATDLTHLQQRINHFLAEKLKTTDS-----VGSPLVEAMAYAVLLGGKRVRPFLIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + V AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A Sbjct: 56 ATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ L ++AFE++++ L D + + L G +GM GQ LD +++ + ++ Sbjct: 116 GDALQSFAFELLAT-DPHLTDREKVVQVTELATASGAKGMCLGQSLDLIAENKAVSLEEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEEDLP 235 +I + KTGAL+ + G ++ SQN + L + + +G+ FQ+ DD+LD + Sbjct: 175 ELIHRNKTGALILSSVMMGLNLSEYSQNVAIKQPLVNYAKAIGLAFQVQDDILDVIGETD 234 Query: 236 K 236 K Sbjct: 235 K 235 >gi|329725410|gb|EGG61893.1| geranyltranstransferase [Staphylococcus epidermidis VCU144] gi|329735348|gb|EGG71640.1| geranyltranstransferase [Staphylococcus epidermidis VCU045] Length = 298 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +++Y+L GGK+IR ++ + N ++ L A+E IH YSLIHDDLP+MDN Sbjct: 35 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 94 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRGK T H Y E AI+AG+ LLT AFE++S+ T ++D+++ ++ L+ G Sbjct: 95 DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSN-DTTIEDSVKVSIIKRLSKASGHL 153 Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD++ E I + I + KTGAL+ F+ + +A QN + L F Sbjct: 154 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 213 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLD D K Sbjct: 214 HLGMMFQIKDDLLDVYGDESK 234 >gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264] gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4] gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24] gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550] gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171] gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264] gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550] gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24] gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4] gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171] Length = 296 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKL------VSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230 >gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus] Length = 300 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 75/235 (31%), Positives = 123/235 (52%), Gaps = 9/235 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60 N S + ++ L+ LL RL A+RYA+LGG K++R L Sbjct: 5 NSDFQSWARSRQALVEEALNRLLPPAE-----VAPQRLHQAMRYAVLGGGKRVRPLLCYA 59 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + AA+E IH YSL+HDDLP MD+ +RRGKPT H++YDE TA++AG Sbjct: 60 AGEVSGAELERLSTAAAALELIHVYSLVHDDLPCMDDDVLRRGKPTCHVEYDEATALLAG 119 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVF 178 + L + AF++++ + + +++ L G +GM GGQ +D++ + + ++ Sbjct: 120 DSLQSLAFQLLAEYRVADSPQTQLRMLEHLARAAGSRGMAGGQAIDLEATGKTLTLPELE 179 Query: 179 MIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ + GA A + + +RL F + +G+ FQ+ DD+LD + Sbjct: 180 FMHIHKTGALIRASVILGANCGRALASKDMDRLDHFAKRIGLAFQVVDDVLDAQS 234 >gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987] gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97] gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187] gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26] gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987] gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97] gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187] gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26] Length = 296 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +G+I+++A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230 >gi|323484856|ref|ZP_08090212.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum WAL-14163] gi|323401852|gb|EGA94194.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum WAL-14163] Length = 294 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 78/232 (33%), Positives = 123/232 (53%), Gaps = 9/232 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 + +L ++++ ++ ++ L H +T + A+ Y++ GGK++R L+ E Sbjct: 2 MNEQLLQSTEEVEQVVYSYLPAEEGHQKT-----IFEAMNYSVKAGGKRLRPLLMREVYR 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF + AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+ L Sbjct: 57 LFGGTGIEIEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVVYGYDMAVLAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180 L YA E + + R + + L G+ GM+GGQ +D++ D+ I + ++ I Sbjct: 117 LIYAIETAARAFQMTDNAQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKLIPKDKLDFI 176 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++KTGAL+ A GA+MA AS E E + +G+ FQ+ DD+LD Sbjct: 177 YRLKTGALLEAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTS 228 >gi|291550249|emb|CBL26511.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus torques L2-14] Length = 296 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 81/220 (36%), Positives = 120/220 (54%), Gaps = 10/220 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76 IL + L + + ++ A+ Y+L+ GGK++R L+ E LF Sbjct: 16 AILREYLPEANG-----YQSVIMEAMEYSLMAGGKRLRPMLMMETYRLFGGETEVIYPFM 70 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E IH YSL+HDDLP+MDN RRG+ T HI Y E I+AG+ LL YAFE Sbjct: 71 AAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETACKAFE 130 Query: 137 QLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFA 192 Q + Q M L G+ GM+GGQ++D+++ IDE + I ++KTGAL+ A Sbjct: 131 QFPEESLRIGQAMRVLARKAGIYGMIGGQVVDVKESGHQIDEEVLDFIFRLKTGALIESA 190 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 GAI+A AS+ + + ++ +G+ FQ+ DD+LD Sbjct: 191 MMIGAILAGASKEDVKSMQKIAGKIGMAFQIQDDILDVTS 230 >gi|242399212|ref|YP_002994636.1| Bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sibiricus MM 739] gi|242265605|gb|ACS90287.1| Bifunctional short chain isoprenyl diphosphate synthase [Thermococcus sibiricus MM 739] Length = 341 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 17/236 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECAS 63 L L+E K +D ++ +L+ + + + A R Y L GGK+IR F+V Sbjct: 6 LFEALKEKIKIVDEVIFELIPE-------KEPKIIYDAARHYPLAGGKRIRPFIVLTSTE 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 N A+ AA+E +H YSL+HDD+ MD RRG+PTVH + AI+AG+ L Sbjct: 59 AVGGNPEKAVYAAAAVELLHNYSLVHDDIMDMDE--KRRGRPTVHKVWGVNMAILAGDLL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 + FE ++ + + ++ ++S T N + GQ D++ E + + + Sbjct: 117 FSKVFEAVAKIPVEAEKVVKVLDVISKTSN----ELCEGQARDLEFENKETVTIDEYMKM 172 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTGAL+ + G ++ + + L +G N+GI FQ+ DD+LD D K Sbjct: 173 ISGKTGALIDASATIGGLIGTENNEYIQALSKYGRNVGIAFQIWDDVLDLIADEEK 228 >gi|165976224|ref|YP_001651817.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876325|gb|ABY69373.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 297 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 88/241 (36%), Positives = 141/241 (58%), Gaps = 11/241 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M+ L + L +RI+ L T ++ L+ A+ YA LLGGK++R FL+ Sbjct: 1 MSYSLSTDLSVIQQRINDFLS-----TKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +V AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A Sbjct: 56 ATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ L ++AFE+I+ ++ L D+ + + + SLT G +GM GQ LD +D+ ++ ++ Sbjct: 116 GDALQSFAFELIAQDES-LTDSQKVRQIQSLTQAAGARGMCLGQSLDLLAEDKAVNLAEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +I + KTGAL+ + G ++ SQN K++L + + +G+ FQ+ DD+LD + Sbjct: 175 ELIHRNKTGALIIASVLMGFNLSAHSQNLAVKQQLERYAQAIGLAFQVQDDILDVIGETH 234 Query: 236 K 236 K Sbjct: 235 K 235 >gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15] gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15] Length = 296 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKL------VSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230 >gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 296 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +G+I+++A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230 >gi|209883275|ref|YP_002287132.1| geranyltranstransferase [Oligotropha carboxidovorans OM5] gi|209871471|gb|ACI91267.1| geranyltranstransferase [Oligotropha carboxidovorans OM5] Length = 312 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 102/237 (43%), Positives = 144/237 (60%), Gaps = 5/237 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 L + + +LD LL + + + RL+ A+RY+ L GGK++R FLV A Sbjct: 13 DFSKLLDATAADTEALLDRLLSERPEQGEIERPHRLIEAMRYSSLNGGKRLRPFLVVASA 72 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++FNV AL GAA+ECIHCYSLIHDDLPSMDN +RRG+PT H ++DE TAI+AG+ Sbjct: 73 AIFNVPREGALMAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTSHKKFDEATAILAGDS 132 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVF 178 LLT AF+II+ + +R L +L G+ GM GGQ++D+ E + V Sbjct: 133 LLTLAFDIITRDEVHRDPTVRLLLTRALARAAGIGGMAGGQIMDLAGEGRFGDKEPPDVA 192 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q+MKTGAL+ + C +GA++ AS+++ L +G G FQ+ADDLLD E D Sbjct: 193 KLQQMKTGALLKYGCIAGALLGQASKDQYAALDAYGHAFGEAFQIADDLLDVEGDAA 249 >gi|34763574|ref|ZP_00144509.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl pyrophosphate synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886763|gb|EAA23901.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl pyrophosphate synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 297 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 82/243 (33%), Positives = 129/243 (53%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN L+E + +T L L + + + + + + YA L GGK++R FL+ Sbjct: 1 MN-DFQVYLKEKTDFFETELKRELKELS------YPETIAKGMEYATLNGGKRLRPFLLF 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ Sbjct: 54 ATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176 G+ LLTYAF ++S +L + + ++S T G+ GM+GGQM+DI+ E I Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIGLET 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + I KTG L+ E I+A +++++ L + + +G+ FQ+ DD+LD E + Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIADLEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEE 233 Query: 234 LPK 236 L K Sbjct: 234 LGK 236 >gi|297616623|ref|YP_003701782.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297144460|gb|ADI01217.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 301 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 76/236 (32%), Positives = 124/236 (52%), Gaps = 10/236 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 +L + ++ + + + + + + A+ YA+ GGK++R LV E A Sbjct: 8 FEGELADKKAYVEKFMREFMPP-----ENAYPQVIHRAMHYAVFNGGKRLRPILVLESAQ 62 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + AL V A+E IH YSL+HDDLP+MD+ +RRGKPT H + E AI+ G+ L Sbjct: 63 VVGKDLTRALPVACAMEMIHSYSLVHDDLPAMDDDDLRRGKPTCHKVFGEANAILTGDAL 122 Query: 124 LTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179 LT AFEI+++ ++ ++++ +G GM+GGQ+LD++ E D + Sbjct: 123 LTLAFEIMTACAELPGMEPRYVAKVVRETARAVGSLGMVGGQVLDLELEGKDTDFFTLKT 182 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL +GA++ + L + EN G+ FQ+ DD+LD E D Sbjct: 183 LHSKKTGALFRACLRAGALLFGVEDERLQALTRYAENFGLAFQITDDILDVEGDEK 238 >gi|317492932|ref|ZP_07951356.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919054|gb|EFV40389.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 301 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 129/237 (54%), Gaps = 10/237 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L+ +R D L + + +L++A+RY ALLGGK++R +LV Sbjct: 4 FEQLLKTYHQRADAALIQYIEPL-----PFADGQLVAAMRYGALLGGKRLRPYLVYATGE 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F ++ AA+ECIH YSL+HDDLP+MD+ +RRG+PT HI++ E AI+AG+ L Sbjct: 59 MFGLSLDNLDAPAAAVECIHAYSLMHDDLPAMDDDNLRRGQPTSHIKFGEAHAILAGDAL 118 Query: 124 LTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180 T AF I++ SP + + R ++ L G+ GM GGQ LD++ E ++D + I Sbjct: 119 QTLAFSILADSPMPDVAVSDRLAMLSELAQASGVAGMCGGQALDLEAEGKYVDLQSLERI 178 Query: 181 QKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTGAL+ A GA+ A + L + +G+ FQ+ DD+LD D K Sbjct: 179 HNHKTGALIRCAIRMGALAAGDTGRAALPLLDRYAAAIGLAFQVQDDILDVIGDSEK 235 >gi|6016394|sp|O66126|ISPA_MICLU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|2982677|dbj|BAA25265.1| farnesyl diphosphate synthase [Micrococcus luteus] Length = 291 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 88/214 (41%), Positives = 122/214 (57%), Gaps = 5/214 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L+ ++ + RL AI Y+L GGK+IR LV N L G A+E Sbjct: 14 NLINESLLNKYHPAQSRLHEAINYSLSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIALE 73 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN RRGK T H ++DE TAI+AG+ LLT AF+ I TQL Sbjct: 74 MIHTYSLIHDDLPAMDNDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCI--LNTQLNA 131 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI 198 I+ L+ L+ G GM+ GQMLD+Q E + ++ I KTG L+ A S I Sbjct: 132 EIKLSLINLLSTASGSNGMVYGQMLDMQGEHKTLTLNELERIHIHKTGELIRAAIVSAGI 191 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + + + E+L G+N+G++FQ+ DD+LD E Sbjct: 192 IMNFNDAQIEQLNIIGKNVGLMFQIKDDILDVEG 225 >gi|169837010|ref|ZP_02870198.1| Dimethylallyltransferase [candidate division TM7 single-cell isolate TM7a] Length = 269 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 84/238 (35%), Positives = 138/238 (57%), Gaps = 10/238 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 LQ+ K +++D L++ + + ++ ++L A+ YA++ GGK+IR L+ LF+ Sbjct: 6 LQKYLKEKKKVVEDNLMELLGNYRDKYPEKLAKAMEYAVMNGGKRIRPILMYMICDLFDE 65 Query: 68 N---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N + + A+E IHCYSL+HDDLP+MDN RRGK TVH +Y+E ++ G+ LL Sbjct: 66 NKKSYDKIKEIAVALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGVLVGDVLL 125 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182 T AF +++S K L+D + Q++ L+ G GM+GGQ +DI+ E ++ + I Sbjct: 126 TEAFGVVASAKN-LEDKSKVQIISKLSEYAGFFGMVGGQFVDIESEHKKVEIDTLKYIHA 184 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237 KTG L+ A E I + + +++ + + LGI FQ+ DD+LD E ++ KK Sbjct: 185 HKTGKLLTAAIELPMIALNIENEKYQKMVEYSKLLGIAFQIKDDILDIEGNFEEIGKK 242 >gi|332159126|ref|YP_004424405.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Pyrococcus sp. NA2] gi|331034589|gb|AEC52401.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Pyrococcus sp. NA2] Length = 341 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 76/238 (31%), Positives = 115/238 (48%), Gaps = 17/238 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61 L +++E +K +D L +++ + + L A R Y L GGK++R F+V Sbjct: 4 DELFERIREKAKFVDEKLFEIIPE-------KEPKVLYEAARHYPLAGGKRVRPFVVLTS 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + AL AIE IH YSL+HDD+ MD RRGKPTVH + AI+AG+ Sbjct: 57 TEAVGGDWRKALYPAVAIELIHNYSLVHDDIMDMDE--TRRGKPTVHRVWGINMAILAGD 114 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 L + AFE IS + + + + L N + GQ +D++ E + + Sbjct: 115 LLFSKAFEAISRAEVPPEKKAKILETIVLASN----ELCEGQAMDLEFENREAVTIEEYM 170 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL + + G I+ S+ L +G N+GI FQ+ DD+LD D K Sbjct: 171 NMVSGKTGALFEASAKIGGIVGSESEEYINALARWGRNVGIAFQIWDDVLDLIADEKK 228 >gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803] gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803] Length = 296 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 133/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGELLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +GAI++ A++ +++ L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEKNLLTFAKYIGLAFQIRDDILDVEG 230 >gi|197301783|ref|ZP_03166853.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC 29176] gi|197299223|gb|EDY33753.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC 29176] Length = 296 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 78/237 (32%), Positives = 127/237 (53%), Gaps = 12/237 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN + + ++I+ IL L + + +T ++ A+ Y+L+ GGK++R L+ Sbjct: 1 MN--FKEEYTDRVEKIEKILKKYLPEKKGYQRT-----IMEAMEYSLMAGGKRLRPMLMW 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E LF AAIE IH YSL+HDDLP+MDN RRG+ T HI Y E I+A Sbjct: 54 ESYRLFGGEGAAIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILA 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175 G+ LL YAFE + ++ + + L G+ GM+GGQ++D+Q+ + + Sbjct: 114 GDALLNYAFETACRAFEEESEHALRIGKALKILADKAGIYGMIGGQVVDVQESGKAVSGE 173 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I ++KT AL+ + +GA++A A + + R+ +G+ FQ+ DD+LD Sbjct: 174 VLDFIYRLKTSALIEASMMAGAVLAGAEEGQVSRMEQIAGKIGLAFQIQDDILDVTS 230 >gi|261416040|ref|YP_003249723.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 295 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 15/241 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 + S+ + + + I D + H+ RL A+RY++ GGK++R L Sbjct: 3 SIESEAKIAQEYLARIAKDAEAKFDEHLPPVKDRPCRLHEAMRYSMFAGGKRLRPGLAKA 62 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F +A+E +H +SLIHDDLP +DN RRGK T H ++ E TA++AG Sbjct: 63 TFDMFGGKGEKIWLATSALEMLHTFSLIHDDLPCVDNDDYRRGKLTSHKKFGEATAVMAG 122 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + L +AFE++ ++ + L H +G GM+GG+M DI+ E +D V Sbjct: 123 DALCIHAFEMMGKTGN-------AKAIELLAHLLGTYGMIGGEMTDIECEGKTVDLEIVD 175 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLP 235 I KT AL+ + GA++A AS+ + E +R +G ++G+ FQ+ DD+LD E+L Sbjct: 176 YIHYHKTAALIEASLLVGAMLAKASEKDMEIIRNYGRSIGLAFQIVDDILDIVSTTEELG 235 Query: 236 K 236 K Sbjct: 236 K 236 >gi|237740341|ref|ZP_04570822.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31] gi|229422358|gb|EEO37405.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31] Length = 298 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 86/243 (35%), Positives = 130/243 (53%), Gaps = 13/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN L+E + +T L L + + + + + + YALL GGK++R FL+ Sbjct: 1 MNSDFQVYLKEKTNFFETELKKELKELS------YPETIAKGMEYALLNGGKRLRPFLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N + ++ IE IH YSL+HDDLP++DN RRGK T H + E AI+ Sbjct: 55 TTLELLNQDIQKGVKSAIGIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILI 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176 G+ LLTYAF ++S + + ++S T G+ GM+GGQM+DI+ E I+ Sbjct: 115 GDALLTYAFYMLSEKNLNILSFEQITKIISKTSAYSGVNGMIGGQMIDIESENKKINLET 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + I K KTG L+ E I+A S++++ L + E +G+ FQ+ DD+LD E D Sbjct: 175 LKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFED 234 Query: 234 LPK 236 L K Sbjct: 235 LGK 237 >gi|24373100|ref|NP_717143.1| geranyltranstransferase [Shewanella oneidensis MR-1] gi|24347286|gb|AAN54587.1|AE015598_6 geranyltranstransferase [Shewanella oneidensis MR-1] Length = 293 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 95/238 (39%), Positives = 137/238 (57%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L + ++E R+ DD L Q S ++ +L +A+ + ALLGGK+IR FLV Sbjct: 2 LVNAIKEYQLRV----DDQLKQRFSTLE-DTAPQLKAAMTHGALLGGKRIRPFLVYSVGQ 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVPLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 T AFEI++ + ++ +L G +GM GGQ +D D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 MKTGAL+ A E I A+A +++ + + F +G+ FQ+ DD+LD E+L K Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGK 234 >gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera] Length = 1187 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 14/230 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58 M L S I+T L++ + ++ ++ A+RY++L GGK+ + Sbjct: 303 MQFDLRSYWTTLISEINTKLEEAI-------PVKYPQQIYEAMRYSVLAKGGKRAPPVMC 355 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 LF + L A A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+ Sbjct: 356 VAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAIL 415 Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176 AG+ L F I S P + + +++ + ++G GM GQ LD++ Sbjct: 416 AGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGA---PNS 472 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 V +Q+ K G + + G + A+ ++ RLR +G +G+++Q+ DD Sbjct: 473 VDFVQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDD 522 >gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3] gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3] Length = 296 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGIGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEG 230 >gi|46143506|ref|ZP_00135080.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208283|ref|YP_001053508.1| geranyltranstransferase [Actinobacillus pleuropneumoniae L20] gi|303251195|ref|ZP_07337374.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307245667|ref|ZP_07527753.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307250028|ref|ZP_07531996.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252381|ref|ZP_07534278.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254629|ref|ZP_07536460.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259080|ref|ZP_07540810.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|126097075|gb|ABN73903.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302649929|gb|EFL80106.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306853369|gb|EFM85588.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306857950|gb|EFM90038.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860303|gb|EFM92319.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862424|gb|EFM94387.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866747|gb|EFM98605.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 297 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 87/241 (36%), Positives = 138/241 (57%), Gaps = 11/241 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M+ L + L +RI+ L T ++ L+ A+ YA LLGGK++R FL+ Sbjct: 1 MSYSLSTDLSVIQQRINDFLS-----TKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +V AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A Sbjct: 56 ATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ L ++AFE+I+ ++ L D+ + + + SL G +GM GQ LD +D ++ ++ Sbjct: 116 GDALQSFAFELIAQDES-LTDSQKVRQIQSLAQAAGARGMCLGQSLDLLAEDTAVNLAEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +I + KTGAL+ + G ++ SQN K+ L + + +G+ FQ+ DD+LD + Sbjct: 175 ELIHRNKTGALIIASVLMGFNLSAHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETD 234 Query: 236 K 236 K Sbjct: 235 K 235 >gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa] Length = 314 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 14/231 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75 T++ ++ + + Q+ D++ A+RY++L G K+ + LF N A Sbjct: 27 TLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRHAAFPT 86 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133 A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG+ L F I S Sbjct: 87 ACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDMAILAGDALFPLGFRHIVSHT 146 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 P + + ++ + +G GM GQ LD++ V +Q+ K G + + Sbjct: 147 PSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEG---GPNSVEFVQEKKFGEMGECSA 203 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD-------CEEDLPKK 237 G ++A A +E +RLR +G +G+++Q+ DD+L+ +ED K+ Sbjct: 204 VCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILEAKTMKSKVDEDKKKR 254 >gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293] gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293] Length = 296 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230 >gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271] gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271] Length = 296 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEG 230 >gi|242242790|ref|ZP_04797235.1| geranyltranstransferase [Staphylococcus epidermidis W23144] gi|242233926|gb|EES36238.1| geranyltranstransferase [Staphylococcus epidermidis W23144] gi|319400858|gb|EFV89077.1| geranyltranstransferase [Staphylococcus epidermidis FRI909] Length = 288 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 L +++Y+L GGK+IR ++ + N ++ L A+E IH YSLIHDDLP+MDN Sbjct: 25 LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 84 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 RRG+ T H Y E AI+AG+ LLT AFE++S+ T ++D+++ ++ L+ G Sbjct: 85 DDYRRGELTNHKVYGEWKAILAGDALLTKAFELVSN-DTTIEDSVKVNIIQRLSKASGHL 143 Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 GM+GGQ LD++ E I + I K KTGAL+ F+ + +A QN + L F Sbjct: 144 GMVGGQALDMESEGKSIRLETLESIHKTKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 203 Query: 216 NLGIIFQLADDLLDCEEDLPK 236 +LG++FQ+ DDLLD D K Sbjct: 204 HLGMMFQIKDDLLDVYGDESK 224 >gi|317056625|ref|YP_004105092.1| polyprenyl synthetase [Ruminococcus albus 7] gi|315448894|gb|ADU22458.1| Polyprenyl synthetase [Ruminococcus albus 7] Length = 297 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 79/245 (32%), Positives = 123/245 (50%), Gaps = 15/245 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L+ +ID L + + + +L A+ Y+L GGK++R LV Sbjct: 1 MTDRHEQLLKAYCAKIDEQLLRF-----TENKPELQSVVLEAMEYSLTAGGKRLRPILVL 55 Query: 60 ECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 E + + ++V ++E IH YSLIHDDLP MDN RRGKP+ H + E A++ Sbjct: 56 EFYRMCGGEDIDKMIKVACSVELIHTYSLIHDDLPCMDNDDFRRGKPSCHKAFSEDIALL 115 Query: 119 AGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDE 174 AG+ L T AFE+I+ + + L+ L+ IG GM+GGQ++D ++E ID Sbjct: 116 AGDALNTLAFEVITDCAMEGTISAETAVMLVSVLSKAIGTDGMIGGQVIDLETENEVIDI 175 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232 + +Q KTGAL+ AC G +++ + + +G FQ+ DD+LD Sbjct: 176 ETLNRLQSCKTGALIEAACVMGVVLSG-KMEYIPAAADYAQAMGRAFQIVDDILDVTGTF 234 Query: 233 -DLPK 236 +L K Sbjct: 235 EELGK 239 >gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis] Length = 369 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 114/217 (52%), Gaps = 5/217 (2%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALR 74 +++ ++ + + ++ +++ ++RY++L K+ + + AL Sbjct: 85 NSVRKEMEAELEKSVPLRYPEKIHVSMRYSVLAEKAKRGPPMMCIAACEAVGGSKQQALP 144 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E +H SLIHDDLP MD+ IRRG+P+ H + A++AG+ L FE I S Sbjct: 145 TACALEMVHTASLIHDDLPCMDDDPIRRGQPSNHTVFGVDMAVLAGDALFPLGFEYIVSS 204 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCF 191 + + + +++ + +G QGM+ GQ +D + D + V I + K G + Sbjct: 205 TSDVPPDRIVKVIAQIAKTVGSQGMVVGQYMDLGSTGNNKFDPSLVEFIHERKFGIMAEC 264 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + +G I+ A+ E ERLR +G ++G+++Q+ADD+L Sbjct: 265 SAVTGGIIGGATDEEVERLRNYGRSVGVLYQIADDIL 301 >gi|313894537|ref|ZP_07828101.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412] gi|313440933|gb|EFR59361.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412] Length = 292 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 77/238 (32%), Positives = 124/238 (52%), Gaps = 12/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + + I+ L ++L + L ++ Y+L+ GGK+IR L Sbjct: 2 FKEYLAASKQNIEQWLGEVLTSPNQEFKP-----LYESMNYSLMQGGKRIRPILSKAVLE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A+ECIH YSL+HDDLP+MDN RRG T H Y E AI+AG+GL Sbjct: 57 MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ 181 LTYAF+++++ KT + + + G +GM+GGQ D+ +++ I ++ ++ Sbjct: 117 LTYAFQLMTANKTATAQE-KLDAIQCVATAAGPEGMVGGQAFDMLSENKHIPLEELQVLH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + KTGAL + E G I+ +A + L + LG++FQ+ DD+LD +L K Sbjct: 176 RGKTGALFNASVELGLILGNADTATRTALMKYANCLGLLFQITDDILDVTGTIEELGK 233 >gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241] gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342] gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241] gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342] gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 296 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230 >gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 296 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 133/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKL------VSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ +D + + + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMDAEGKRLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230 >gi|294791863|ref|ZP_06757011.1| geranyltranstransferase [Veillonella sp. 6_1_27] gi|294457093|gb|EFG25455.1| geranyltranstransferase [Veillonella sp. 6_1_27] Length = 292 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 12/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + + I+ L ++L + Q ++L ++ Y+L+ GGK+IR L Sbjct: 2 FKDYLASSKQNIEQWLGEVL-----NSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A+ECIH YSL+HDDLP+MDN RRG T H Y E AI+AG+GL Sbjct: 57 MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 LTYAF++++S T + + + G +GM+GGQ D +D+ I ++ ++ Sbjct: 117 LTYAFQLMTS-NTVASAQQKLDAIKCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KTGAL + E G I+ A+ + L + LG++FQ+ DD+LD +L K Sbjct: 176 TGKTGALFNASVELGLILGSANNTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGK 233 >gi|153814704|ref|ZP_01967372.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756] gi|317500234|ref|ZP_07958464.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087536|ref|ZP_08336468.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847735|gb|EDK24653.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756] gi|316898360|gb|EFV20401.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA] gi|330401754|gb|EGG81332.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium 3_1_46FAA] Length = 296 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 81/237 (34%), Positives = 123/237 (51%), Gaps = 12/237 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN ++ +++I+ IL L QT H + A+ Y+L+ GGK++R L+ Sbjct: 1 MN--FKEDCRKRTEKIEEILRKYLPD-----QTGHQQIIEEAMEYSLMAGGKRLRPMLMK 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E LF AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I+ Sbjct: 54 ETFDLFGGKGGVIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEDMGILT 113 Query: 120 GNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175 G+ LL YAFE S N + + + L G+ GM+GGQ++D++ I Sbjct: 114 GDALLNYAFETACSAFETDPQNSILIGRALKILAGKAGIYGMIGGQVVDVRSAGCKISGE 173 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I ++KTGAL+ + GA++A A + E ++ +G+ FQ+ DD+LD Sbjct: 174 LLAFIYRLKTGALIEASVMIGAVLAGAKEEEIGKMEEIAGKIGLAFQIQDDILDVTS 230 >gi|269797982|ref|YP_003311882.1| polyprenyl synthetase [Veillonella parvula DSM 2008] gi|269094611|gb|ACZ24602.1| Polyprenyl synthetase [Veillonella parvula DSM 2008] Length = 292 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 125/238 (52%), Gaps = 12/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + + I+ L ++L + Q ++L ++ Y+L+ GGK+IR L Sbjct: 2 FKDYLASSKQNIEQWLGEVL-----NSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A+ECIH YSL+HDDLP+MDN RRG T H Y E AI+AG+GL Sbjct: 57 MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 LTYAF++++S T + + + G +GM+GGQ D +D+ I ++ ++ Sbjct: 117 LTYAFQLMTS-NTVASAQQKLDAIKCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KTGAL + E G I+ A++ + L + LG++FQ+ DD+LD +L K Sbjct: 176 TGKTGALFNASVELGLILGSANKTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGK 233 >gi|49483771|ref|YP_040995.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425647|ref|ZP_05602071.1| ispA [Staphylococcus aureus subsp. aureus 55/2053] gi|257428308|ref|ZP_05604706.1| ispA [Staphylococcus aureus subsp. aureus 65-1322] gi|257430945|ref|ZP_05607325.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 68-397] gi|257433634|ref|ZP_05609992.1| ispA protein [Staphylococcus aureus subsp. aureus E1410] gi|257436547|ref|ZP_05612591.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876] gi|282904104|ref|ZP_06311992.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160] gi|282905931|ref|ZP_06313786.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908841|ref|ZP_06316659.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911160|ref|ZP_06318962.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914329|ref|ZP_06322115.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899] gi|282919298|ref|ZP_06327033.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427] gi|282924623|ref|ZP_06332291.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101] gi|283958286|ref|ZP_06375737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus A017934/97] gi|293503404|ref|ZP_06667251.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 58-424] gi|293510420|ref|ZP_06669126.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809] gi|293530960|ref|ZP_06671642.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015] gi|295428100|ref|ZP_06820732.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590934|ref|ZP_06949572.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8] gi|49241900|emb|CAG40594.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271341|gb|EEV03487.1| ispA [Staphylococcus aureus subsp. aureus 55/2053] gi|257275149|gb|EEV06636.1| ispA [Staphylococcus aureus subsp. aureus 65-1322] gi|257278375|gb|EEV09011.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 68-397] gi|257281727|gb|EEV11864.1| ispA protein [Staphylococcus aureus subsp. aureus E1410] gi|257283898|gb|EEV14021.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876] gi|282313458|gb|EFB43853.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101] gi|282317108|gb|EFB47482.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427] gi|282321510|gb|EFB51835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899] gi|282324855|gb|EFB55165.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327105|gb|EFB57400.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331223|gb|EFB60737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595722|gb|EFC00686.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160] gi|283790435|gb|EFC29252.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920228|gb|EFD97294.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015] gi|291095070|gb|EFE25335.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 58-424] gi|291466784|gb|EFF09304.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809] gi|295128458|gb|EFG58092.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575820|gb|EFH94536.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8] gi|312438010|gb|ADQ77081.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH60] gi|315195423|gb|EFU25810.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus CGS00] Length = 293 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 94/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ N +L ++ Y+L GGK+IR L+ N + ++ Sbjct: 7 NKLIDEVNNELSVAINKSVMNTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 67 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ FA Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] Length = 326 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 17/240 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58 +N L + I+ LD+ + +H + A+RY++L G K+ + Sbjct: 43 LNFDLRTYWTTLITEINQKLDEAI-------PVKHPAGIYEAMRYSVLPQGPKRAPPVMC 95 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 LF + L A A+E +H SLIHDDLP MD+ +RRGKP+ H Y AI+ Sbjct: 96 VAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAIL 155 Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176 AG+ L AF+ I S P + +L+ + +G GM GQ +D++ + Sbjct: 156 AGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLS- 214 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +Q+ K GA+ + G ++ A+++E + LR +G +G+++Q+ DD+ ED K Sbjct: 215 --FVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI---TEDKKK 269 >gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] Length = 299 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 11/231 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 LQ ID L D + Q ++ + RL A+RY LLGG K+IR L A Sbjct: 13 LQHCRAEIDQQLADYMDQASA------SQRLQDAMRYGLLGGGKRIRPALCLAAAEAVGG 66 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AL A+E IH YSL+HDDLP+MDN +RRG+ T HI +DE +AI+AG+ L A Sbjct: 67 QRQIALAPACALEMIHAYSLMHDDLPAMDNDDLRRGRATAHIAFDESSAILAGDALQAEA 126 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185 F ++++ +L ++ ++ +L + G GM+GGQ +D++ + Q+ + + KT Sbjct: 127 FRVLATA-PRLSAEVKLAMVKALANACGANGMVGGQAIDLESVARTLTLDQLENMHRHKT 185 Query: 186 GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 GAL+ + GA+ + L + LG+ FQ+ DDLLD E D Sbjct: 186 GALIEASVHLGALAGGVKDPALLDALARYARALGLAFQVQDDLLDIEGDTE 236 >gi|46015555|pdb|1RTR|A Chain A, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate Synthase gi|46015556|pdb|1RTR|B Chain B, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate Synthase Length = 301 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + ++ Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 67 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ FA Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 186 VMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|290474684|ref|YP_003467564.1| geranyltranstransferase [Xenorhabdus bovienii SS-2004] gi|289173997|emb|CBJ80784.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Xenorhabdus bovienii SS-2004] Length = 305 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 131/237 (55%), Gaps = 6/237 (2%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M+ + +E+ ++D L+ T S + + L +A+ + A+LGGK++R FLV Sbjct: 1 MSEQYKAPFEEHLSACQQHVNDKLMATFSSLP-FLDSPLATAMLHGAVLGGKRLRPFLVY 59 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +F ++ + A+ECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+A Sbjct: 60 SVGEMFGLSRESLDAPALALECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGESLAILA 119 Query: 120 GNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L + AFEI++ + + R ++ L GL GM GGQ LD++ E ID Sbjct: 120 GDALQSLAFEILAKQDMPNIALSDRLAMVAELATASGLAGMCGGQSLDLEAEGKQIDLAT 179 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I + KTGAL+C A GA A + L + + +G+ FQ+ DD+LD Sbjct: 180 LEQIHRHKTGALICTAVRLGAYSAGQRGREVLPLLDQYSQAIGLAFQVHDDILDVIG 236 >gi|240145667|ref|ZP_04744268.1| geranyltranstransferase [Roseburia intestinalis L1-82] gi|257202256|gb|EEV00541.1| geranyltranstransferase [Roseburia intestinalis L1-82] Length = 296 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 10/234 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 + +++ ++ + I+ L + + +T ++ A+ Y+ L GGK++R L+ E Sbjct: 2 DIKAEIGRHTDEAEQIITSYLPEEKGYQKT-----VIEAMNYSFLAGGKRLRPILMLETY 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF AAIE IH YSL+HDDLP+MDN RRGK T H+ Y E AI+AG+ Sbjct: 57 RLFGGKSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVF 178 LLTYAFE + N + + L+ G+ GM+GGQ +D++ E + ++ Sbjct: 117 LLTYAFETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLD 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I ++KT AL+ + GA++A A+ +E++ + +G+ FQ+ DD+LD Sbjct: 177 FIYRLKTSALIEASMMIGAVLAGATGSEQKIVEAVASKVGLAFQIQDDILDVTS 230 >gi|47095946|ref|ZP_00233549.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854] gi|254898472|ref|ZP_05258396.1| hypothetical protein LmonJ_01615 [Listeria monocytogenes J0161] gi|254912037|ref|ZP_05262049.1| geranyltranstransferase [Listeria monocytogenes J2818] gi|254936364|ref|ZP_05268061.1| geranyltranstransferase [Listeria monocytogenes F6900] gi|47015692|gb|EAL06622.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854] gi|258608955|gb|EEW21563.1| geranyltranstransferase [Listeria monocytogenes F6900] gi|293590003|gb|EFF98337.1| geranyltranstransferase [Listeria monocytogenes J2818] Length = 293 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 ++ ++D+ L + + + RL ++ Y++ GGK+IR LV VN L Sbjct: 7 FLEQYKKVIDESLFKEINERNIE--PRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPL 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I Sbjct: 65 LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSI 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGAL 188 ++ L R L+ ++ + G +GM+GGQ+ D++ E + ++ I KTG L Sbjct: 125 LAEDDN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKHVTLEELSSIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +A S A +A A + +RLR F EN+GI FQ++DD+LD D K Sbjct: 184 LIYAVTSAAKIAEADLEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1] gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1] Length = 296 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 80/236 (33%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E +H YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKEKNLGVGAACALEMVHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230 >gi|291536359|emb|CBL09471.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis M50/1] Length = 296 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 10/234 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 + +++ ++ + I+ L + + +T ++ A+ Y+ L GGK++R L+ E Sbjct: 2 DIKAEIGRHTDEAEQIITSYLPEEKGYQKT-----VIEAMNYSFLAGGKRLRPILMLETY 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF AAIE IH YSL+HDDLP+MDN RRGK T H+ Y E AI+AG+ Sbjct: 57 RLFGGKSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVF 178 LLTYAFE + N + + L+ G+ GM+GGQ +D++ E + ++ Sbjct: 117 LLTYAFETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLD 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I ++KT AL+ + GA++A A+ +E++ + +G+ FQ+ DD+LD Sbjct: 177 FIYRLKTSALIEASMMIGAVLAGATGSEQKIVEEVASKVGLAFQIQDDILDVTS 230 >gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107] gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107] Length = 296 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 124/233 (53%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L + + ++ LDD + + + L A+RY+LL GGK++R L Sbjct: 5 FDFKAYLGKAKETVEAALDD-------SLGPERPESLRDAMRYSLLAGGKRLRPILCLAA 57 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + A+ A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+ Sbjct: 58 CELAGGDAKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGD 117 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE+++ + + +++ L+ G G++GGQ++D++ E +D + Sbjct: 118 ALLTRAFEMVALRSPGVPADQLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEY 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ +GA++ +A LR + +G+ FQ+ DD+LD Sbjct: 178 IHLHKTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITA 230 >gi|238754213|ref|ZP_04615570.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473] gi|238707460|gb|EEP99820.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473] Length = 305 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 91/241 (37%), Positives = 130/241 (53%), Gaps = 6/241 (2%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 MN G P + ++ LL + + H+D L+ A+RY LLGGK++R +LV Sbjct: 1 MNMGEPVLFNQQLAVYQQRANNALLSFIAPLPFNHSD-LVQAMRYGTLLGGKRLRPYLVY 59 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +F V T AA+ECIH YSL+HDDLP+MDN +RRG+PT HI++ E AI+A Sbjct: 60 ATGQMFGVPLATLDAPAAAVECIHAYSLMHDDLPAMDNDDLRRGQPTCHIKFGEANAILA 119 Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ P + R ++ L G+ GM GGQ LD+ E I T+ Sbjct: 120 GDALQTLAFSILADAPMPDVTLQDRISMLSELATASGVAGMCGGQALDLAAEERQISLTE 179 Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A A+ A A +L + +G+ FQ+ DD+LD D Sbjct: 180 LEKIHRHKTGALIRTAVRMAALTAGTAGHLAMPQLDRYANAIGLAFQVQDDILDVIGDTA 239 Query: 236 K 236 K Sbjct: 240 K 240 >gi|57650478|ref|YP_186407.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL] gi|87160564|ref|YP_494166.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195328|ref|YP_500132.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221639|ref|YP_001332461.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509750|ref|YP_001575409.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140058|ref|ZP_03564551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258451179|ref|ZP_05699214.1| geranyltranstransferase [Staphylococcus aureus A5948] gi|262049107|ref|ZP_06021984.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30] gi|262051188|ref|ZP_06023412.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3] gi|282924770|ref|ZP_06332437.1| geranyltranstransferase [Staphylococcus aureus A9765] gi|284024581|ref|ZP_06378979.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 132] gi|294848552|ref|ZP_06789298.1| geranyltranstransferase [Staphylococcus aureus A9754] gi|304380890|ref|ZP_07363550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|57284664|gb|AAW36758.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL] gi|87126538|gb|ABD21052.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202886|gb|ABD30696.1| geranyltranstransferase, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374439|dbj|BAF67699.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368559|gb|ABX29530.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257861234|gb|EEV84047.1| geranyltranstransferase [Staphylococcus aureus A5948] gi|259160825|gb|EEW45845.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3] gi|259162776|gb|EEW47341.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30] gi|269941012|emb|CBI49396.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus TW20] gi|282592777|gb|EFB97783.1| geranyltranstransferase [Staphylococcus aureus A9765] gi|294824578|gb|EFG41001.1| geranyltranstransferase [Staphylococcus aureus A9754] gi|304340617|gb|EFM06551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198784|gb|EFU29112.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus CGS01] gi|329314199|gb|AEB88612.1| Geranyltranstransferase [Staphylococcus aureus subsp. aureus T0131] gi|329728330|gb|EGG64767.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21189] Length = 293 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + ++ Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 67 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ FA Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 186 VMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|310689999|pdb|3P8R|A Chain A, Crystal Structure Of Polyprenyl Synthase From Vibrio Cholerae Length = 302 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 89/238 (37%), Positives = 124/238 (52%), Gaps = 14/238 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 L S Q N++++D L+ + QT L+ A+RY LLGGK+ R +LV Sbjct: 11 EALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYIT 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ Sbjct: 62 GQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L T AF I++ R ++ +L G QGM GQ LD+ E I ++ Sbjct: 122 ALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELE 181 Query: 179 MIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D Sbjct: 182 TIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 239 >gi|282850211|ref|ZP_06259590.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745] gi|282579704|gb|EFB85108.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745] Length = 292 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 12/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + + I+ L ++L + Q ++L ++ Y+L+ GGK+IR L Sbjct: 2 FKDYLASSKQNIEQWLGEVL-----NSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A+ECIH YSL+HDDLP+MDN RRG T H Y E AI+AG+GL Sbjct: 57 MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 LTYAF++++S T + + + G +GM+GGQ D +D+ I ++ ++ Sbjct: 117 LTYAFQLMTS-NTVASAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KTGAL + E G I+ A+ + L + LG++FQ+ DD+LD +L K Sbjct: 176 SGKTGALFNASVELGLILGCANNTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGK 233 >gi|225018823|ref|ZP_03708015.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum DSM 5476] gi|224948383|gb|EEG29592.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum DSM 5476] Length = 300 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 84/240 (35%), Positives = 132/240 (55%), Gaps = 14/240 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 +L E + +D L+ LL + ++ A+RY++ GGK+IR L E Sbjct: 7 EFQDQLNEYIQLVDRELERLLPD-----EDILQKSVVDAMRYSVTAGGKRIRPVLTLEVC 61 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + AL A+E IH YSLIHDDLP MD+ +RRGKP+ HI + E TA++AG+ Sbjct: 62 RMLGGDPHKALPFACAVELIHSYSLIHDDLPCMDDDAMRRGKPSCHIAFGESTALLAGDA 121 Query: 123 LLTYAFEIISSP----KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-- 176 LLT AFE S T ++ +R+ +LS G+ GM+GGQ++D++ E Sbjct: 122 LLTLAFETASHAPQTHGTGCEETLRAISILS--RLAGVHGMIGGQVIDLESEGRGIEYPV 179 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + +KTGAL+ AC+ GA A A + + +++ + + LG+ FQ+ DD+LD D + Sbjct: 180 LHQMHLLKTGALIKAACQMGAAAAGAQEEDLDKIGEYADALGLAFQICDDILDVVGDEAQ 239 >gi|42521829|ref|NP_967209.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100] gi|39574359|emb|CAE77863.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100] Length = 289 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 7/230 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61 + + ++ Q ++ ++ L D+ L S + L SA GGK+ R L Sbjct: 8 DQEIAARTQAVNQFVEKYLSDMELPAGSAISELRKSMLYSA----TNGGKRFRPVLSLLV 63 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 LF L AA+E IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 64 GELFGAGKERILPFAAAVEMIHTYSLIHDDLPCMDNDDMRRGKPTNHKVFGEDFALLAGD 123 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM 179 LLT AF +I+ + L L+ G++GM+GGQ +D++ D+ + ++ Sbjct: 124 ALLTEAFMLIAE-NYGDNSFLVGHLTRLLSSAAGIRGMVGGQAIDLRAGDKQMSLEELTH 182 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + ++KTGAL+ A E A++A A E E L+ FGE LG+ FQ+ADD+LD Sbjct: 183 LHRLKTGALIRVAVEGAAVIAGAKPTEIESLKKFGEGLGLAFQVADDVLD 232 >gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822] gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis] Length = 303 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 130/237 (54%), Gaps = 16/237 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 L+E ++ ++ +LD+LL RL A+RYA+LGG K++R+ LV Sbjct: 11 WLRERAQHVEHVLDELLPGADIA-----PTRLHEAMRYAVLGGGKRVRAVLVYAAGQACP 65 Query: 67 VNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 VN T R AA+E IH YSL+HDDLP MD+ +RRG+PTVH+Q+DE TA++AG Sbjct: 66 VNGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAG 125 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178 + L AFE+++ + + Q L G QGM GGQ +D+ + ++ Sbjct: 126 DALQPLAFELLA--GMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQ 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 184 TMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTA 240 >gi|228935501|ref|ZP_04098319.1| Geranyltranstransferase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824253|gb|EEM70067.1| Geranyltranstransferase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 296 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 80/236 (33%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F+ + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLEFAKAAGPEGMVGGQVADMEAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230 >gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430] Length = 295 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 131/242 (54%), Gaps = 12/242 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M + Q ++ L L +T +D+L +++ Y+L+ GGK++R L+ Sbjct: 1 MGAEMKELWQSRRTLVERALQAELDRTDI-----LDDKLRASMAYSLMAGGKRLRPILLM 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + + A+E IH YSLIHDDLP+MDN RRGK T H YDE TAI+A Sbjct: 56 AAADAVGADGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKAYDEGTAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 G+ LLT AF +I + + +++ ++ + G +GM+GGQMLD++ E I ++ Sbjct: 116 GDALLTLAFTVILR-QQDVPAERLLRIVDEISRSAGAEGMVGGQMLDLEAENRRISMEEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234 + KTGAL A SGAI+A AS+ + L + ++ G+ FQ+ DD+LD D+ Sbjct: 175 QRVHMGKTGALFRAALRSGAILAGASEQQLAALTTYADHFGLAFQITDDILDVVGTAEDI 234 Query: 235 PK 236 K Sbjct: 235 GK 236 >gi|238019305|ref|ZP_04599731.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748] gi|237864004|gb|EEP65294.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748] Length = 292 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 77/238 (32%), Positives = 125/238 (52%), Gaps = 12/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + + I+ L ++L + L ++ Y+L+ GGK+IR L Sbjct: 2 FKDYLASSKQHIEQWLGEVLTSPNREFKP-----LYESMNYSLMQGGKRIRPILSKAVLE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + + A+ECIH YSL+HDDLP+MDN RRG T H Y E AI+AG+GL Sbjct: 57 MLHKDPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGMAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ 181 LTYAF+++++ +T + + + G +GM+GGQ D+ +D+ I ++ ++ Sbjct: 117 LTYAFQLMTANETATAQE-KLDAIQCVATAAGPEGMVGGQAFDMLSEDKHIPLEELKVLH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + KTGAL + E G I+ +A + L + LG++FQ+ DD+LD +L K Sbjct: 176 RGKTGALFNASVELGLILGNADTATRTALMEYANCLGLLFQITDDILDVTGTIEELGK 233 >gi|254472285|ref|ZP_05085685.1| geranyltranstransferase [Pseudovibrio sp. JE062] gi|211958568|gb|EEA93768.1| geranyltranstransferase [Pseudovibrio sp. JE062] Length = 301 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 106/238 (44%), Positives = 146/238 (61%), Gaps = 3/238 (1%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M+ L S + E ++ ++ L LL + + +RLL A+ Y AL GGK++R L+ Sbjct: 1 MSVALKSVITETAQSLEEKLTSLLGEKVLPQEVARPERLLEAMNYAALSGGKRLRPVLMV 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E A LF L +A+ECIHCYSL HDDLP+MD+ +RRG+PT H +DE TAI+A Sbjct: 61 EAARLFGHEDEGTLVAASALECIHCYSLAHDDLPAMDDDDLRRGRPTTHKAFDEATAILA 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177 G+ LLT AF+ I+ + IR +L L G+ GM GGQMLD+ E D E ++ Sbjct: 121 GDALLTIAFDFIADEQVHPDAAIRLRLSQELARASGIGGMAGGQMLDLASEHRDRTEAEI 180 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ +AC +GAI+A+AS ++ RL FGE +G+ FQLADDLLD D Sbjct: 181 RQLQAMKTGALIRYACRAGAILANASDDDIARLTRFGEIIGLAFQLADDLLDLTGDAE 238 >gi|303252274|ref|ZP_07338440.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247789|ref|ZP_07529826.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307256855|ref|ZP_07538633.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261287|ref|ZP_07542962.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|302648733|gb|EFL78923.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855732|gb|EFM87898.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306864589|gb|EFM96494.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869018|gb|EFN00820.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 297 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 88/241 (36%), Positives = 139/241 (57%), Gaps = 11/241 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M+ L + L +RI+ L T ++ L+ A+ YA LLGGK++R FL+ Sbjct: 1 MSYSLSTDLSVIQQRINDFLS-----TKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +V AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A Sbjct: 56 ATGRMLDVPLEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ L ++AFE+I ++ L D+ + + + SLT G +GM GQ LD +D+ ++ ++ Sbjct: 116 GDALQSFAFELIVQDES-LTDSQKVRQIQSLTQAAGARGMCLGQSLDLLAEDKAVNLAEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +I + KTGAL+ + G ++ SQN K+ L + + +G+ FQ+ DD+LD + Sbjct: 175 ELIHRNKTGALIIASVLMGFNLSVHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETD 234 Query: 236 K 236 K Sbjct: 235 K 235 >gi|117618681|ref|YP_857809.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560088|gb|ABK37036.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 296 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 89/237 (37%), Positives = 126/237 (53%), Gaps = 9/237 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67 L + S+ +DD L + RL A+RY LLGGK++R FLV + V Sbjct: 3 LDDFSRLHRQRIDDCLSAQLESLPA-MAPRLRDAMRYGLLLGGKRVRPFLVYAVGEMLGV 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AA+ECIH YSL+HDDLP+MDN +RRG+PTVH +DE TAI+AG+ L T A Sbjct: 62 KNELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLA 121 Query: 128 FEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 F I++ R +++ L G GM GGQ LD+Q E I ++ + + K Sbjct: 122 FTILADHPMPDSLLANRVRMLSRLARASGYLGMCGGQALDLQAEGRQISIAELEQVHRHK 181 Query: 185 TGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL+ A GA+ A + L+ + +G+ FQ+ DD+LD D L K+ Sbjct: 182 TGALIECAVALGALCKADVDETTLSALQTYAAAIGLAFQVQDDILDITGDTATLGKR 238 >gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp. lyrata] gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp. lyrata] Length = 337 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 120/248 (48%), Gaps = 13/248 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVT 59 + S + +K I+ LDD + + + + A+RY LL GGK++R L Sbjct: 30 DSEFISYMNNKAKSINKALDDSIPLCNNSVPLWKPVLEVREAMRYTLLSGGKRVRPMLCL 89 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L TA+ A+E IH SLI DDLP MD+ +RRGKPT H + E TAI+A Sbjct: 90 VACELVGGQESTAMPAACAVEMIHASSLILDDLPCMDDDSLRRGKPTNHKVFGEKTAILA 149 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-------IQDEF 171 N L++ A E ++S + + + + +G++G++ GQ D + E Sbjct: 150 ANALMSLAVEQTLASTSLGVTSERVLRAVQEMARAVGIEGLVAGQAADLAGGRMSFETED 209 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + I KT L+ A GAIM S E ERL+ + +G++FQ+ DD+LD Sbjct: 210 EGLRYLEFIHIHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDET 269 Query: 232 ---EDLPK 236 E+L K Sbjct: 270 KSSEELGK 277 >gi|261212060|ref|ZP_05926346.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC341] gi|260838668|gb|EEX65319.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC341] Length = 294 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 87/240 (36%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N++++D L+ + Q+ L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSYQQRNNQQLDLWLNRIPFQSLP---------LIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ Sbjct: 52 ITGQMLGCELNELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R ++ +L G QGM GQ LD+ E + + Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + + +G+ FQ+ DD+LD D Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYADAVGLAFQVQDDILDIISDTE 231 >gi|315303030|ref|ZP_07873740.1| geranyltranstransferase [Listeria ivanovii FSL F6-596] gi|313628597|gb|EFR97020.1| geranyltranstransferase [Listeria ivanovii FSL F6-596] Length = 293 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 86/228 (37%), Positives = 128/228 (56%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 + ++DD LL + + +L ++ Y++ GGK+IR LV N + + Sbjct: 7 FLEHYKKVMDDSLLTEINKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNTDPM 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y + TAI+AG+ LLT AF + Sbjct: 65 RGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKRTNHKVYGDATAILAGDALLTLAFSV 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 ++ L R L+ L+ + G +GM+GGQ D++ E I ++ I KTG L Sbjct: 125 LAE-DANLTFETRLALINELSFSSGAEGMVGGQQADMEAENKKITLEELATIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + FA S A +A A+ + +RLR F EN+G+ FQ++DD+LD D K Sbjct: 184 LIFAVTSAAKIAEATPEQTKRLRIFAENIGVGFQISDDILDVIGDETK 231 >gi|21283203|ref|NP_646291.1| hypothetical protein MW1474 [Staphylococcus aureus subsp. aureus MW2] gi|49486358|ref|YP_043579.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MSSA476] gi|253732175|ref|ZP_04866340.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|297207759|ref|ZP_06924194.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911840|ref|ZP_07129283.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70] gi|21204643|dbj|BAB95339.1| ispA [Staphylococcus aureus subsp. aureus MW2] gi|49244801|emb|CAG43248.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MSSA476] gi|253723964|gb|EES92693.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|296887776|gb|EFH26674.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886086|gb|EFK81288.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70] Length = 293 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + ++ Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 67 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ FA Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|15222767|ref|NP_175376.1| GGPS6 (geranylgeranyl pyrophosphate synthase 6); farnesyltranstransferase [Arabidopsis thaliana] gi|85540951|sp|O22043|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6, mitochondrial; Short=GGPP synthase 6; Short=GGPS6; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6; AltName: Full=Dimethylallyltranstransferase 6; AltName: Full=Farnesyl diphosphate synthase 6; AltName: Full=Farnesyltranstransferase 6; AltName: Full=Geranyltranstransferase 6; Flags: Precursor gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana] gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana] gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana] gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana] Length = 336 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 13/248 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVT 59 + S ++ +K I+ LD+ + + + + A+RY LL GGK++R L Sbjct: 29 DSEFISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCL 88 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L TA+ A+E IH SLI DDLP MD+ +RRGKPT H + E T+I+A Sbjct: 89 VACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILA 148 Query: 120 GNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-------IQDEF 171 N L + A + ++S + + + + +G +G++ GQ D ++E Sbjct: 149 SNALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNED 208 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + + ++ KT L+ A GAIM S E ERL+ + +G++FQ+ DD+LD Sbjct: 209 DELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDET 268 Query: 232 ---EDLPK 236 E+L K Sbjct: 269 KSSEELGK 276 >gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas acetoxidans DSM 684] gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas acetoxidans DSM 684] Length = 297 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 86/236 (36%), Positives = 131/236 (55%), Gaps = 11/236 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + L +R++ L L + QH +L A+ Y++ GGK++R L+ Sbjct: 2 DLKNYLTSQRQRVEEALAQTLPP-----KQQHPTQLHEAMHYSVFAGGKRLRPILMMAAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + L A+E IH YSLIHDDLP+MD+ +RRG+PT H + E TAI+AG+ Sbjct: 57 EAVGGDIENVLPAACAMEMIHTYSLIHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDA 116 Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQV 177 LLT AF ++S+P Q+ D R +++ L G GM+GGQ++D++ E + D V Sbjct: 117 LLTEAFVVLSAPSDSVQINDRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQPDLATV 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I KTGAL+ + +GA++ A+ + E L FG+ G+ FQ+ADD+LD D Sbjct: 177 DYIHAHKTGALILASIRAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGD 232 >gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1] gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160 [Aromatoleum aromaticum EbN1] Length = 298 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 127/239 (53%), Gaps = 11/239 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 MN + ++ +R +T L++LL RL A+RYA+LGG K+IR LV Sbjct: 4 MN--FLAWMEAIQRRSETALENLLPDANIA-----PARLHEAMRYAVLGGGKRIRPLLVH 56 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L +V A+E IH YSL+HDDLP MDN +RRGKPTVH++YD+ TA++ Sbjct: 57 AAGGLVGAAPERLDKVACAVELIHAYSLVHDDLPCMDNDVLRRGKPTVHVEYDDATALLV 116 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ L AF+ +S + + ++ L G +GM GGQ +D + + ++ Sbjct: 117 GDSLQALAFQSLSEHPLTEDPSEQLSMITQLARASGSRGMAGGQAIDLAAVGKQLSREEL 176 Query: 178 FMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ + GA A + ERL +G+ +G++FQ+ DD+LD + D Sbjct: 177 EYMHIHKTGALIRASVLLGAACGARLDSDRLERLDHYGKLVGLLFQVVDDILDTQSDTA 235 >gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2] gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2] Length = 327 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 87/236 (36%), Positives = 124/236 (52%), Gaps = 6/236 (2%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L + I+ L AS + L A+RYA+L GGK++R LV Sbjct: 31 FDLRAWSAGQLAAIERALS---CWVASPDEAPAPAGLCDAMRYAVLDGGKRLRPLLVMAA 87 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + N + TALR AIE IH YSL+HDD+P MDN +RRGKPTVH+QY E A++AG+ Sbjct: 88 CAAVNGDAATALRPACAIELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQYGEAQALLAGD 147 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179 L AFE+++ + +++L L G QGM GGQ +D+ + T Q+ Sbjct: 148 ALQALAFELLTPGDDSVDAPTQARLCRLLAQAAGYQGMAGGQAIDLASVGLPLTSAQLHE 207 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + ++KTGAL+ + GA AS LR +G +G+ FQ+ DD+LD D Sbjct: 208 MHRLKTGALLQASVMMGAACGAASPTALAALRDYGAAIGLAFQVVDDILDVTADAA 263 >gi|15924511|ref|NP_372045.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp. aureus Mu50] gi|15927102|ref|NP_374635.1| hypothetical protein SA1352 [Staphylococcus aureus subsp. aureus N315] gi|148268006|ref|YP_001246949.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150394073|ref|YP_001316748.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156979840|ref|YP_001442099.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp. aureus Mu3] gi|253314891|ref|ZP_04838104.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006308|ref|ZP_05144909.2| geranyltranstransferase-like protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793598|ref|ZP_05642577.1| polyprenyl synthetase [Staphylococcus aureus A9781] gi|258411102|ref|ZP_05681382.1| polyprenyl synthetase [Staphylococcus aureus A9763] gi|258420094|ref|ZP_05683049.1| polyprenyl synthetase [Staphylococcus aureus A9719] gi|258437354|ref|ZP_05689338.1| polyprenyl synthetase [Staphylococcus aureus A9299] gi|258443560|ref|ZP_05691899.1| polyprenyl synthetase [Staphylococcus aureus A8115] gi|258446767|ref|ZP_05694921.1| polyprenyl synthetase [Staphylococcus aureus A6300] gi|258448681|ref|ZP_05696793.1| polyprenyl synthetase [Staphylococcus aureus A6224] gi|258453498|ref|ZP_05701476.1| polyprenyl synthetase [Staphylococcus aureus A5937] gi|269203151|ref|YP_003282420.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98] gi|282893023|ref|ZP_06301257.1| geranyltranstransferase [Staphylococcus aureus A8117] gi|282928993|ref|ZP_06336580.1| geranyltranstransferase [Staphylococcus aureus A10102] gi|295406644|ref|ZP_06816449.1| geranyltranstransferase [Staphylococcus aureus A8819] gi|296275122|ref|ZP_06857629.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MR1] gi|297245773|ref|ZP_06929638.1| geranyltranstransferase [Staphylococcus aureus A8796] gi|13701320|dbj|BAB42614.1| ispA [Staphylococcus aureus subsp. aureus N315] gi|14247292|dbj|BAB57683.1| geranyltranstransferase homolog [Staphylococcus aureus subsp. aureus Mu50] gi|147741075|gb|ABQ49373.1| farnesyl-diphosphate synthase [Staphylococcus aureus subsp. aureus JH9] gi|149946525|gb|ABR52461.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156721975|dbj|BAF78392.1| geranyltranstransferase homolog [Staphylococcus aureus subsp. aureus Mu3] gi|257787570|gb|EEV25910.1| polyprenyl synthetase [Staphylococcus aureus A9781] gi|257840252|gb|EEV64716.1| polyprenyl synthetase [Staphylococcus aureus A9763] gi|257843805|gb|EEV68199.1| polyprenyl synthetase [Staphylococcus aureus A9719] gi|257848559|gb|EEV72547.1| polyprenyl synthetase [Staphylococcus aureus A9299] gi|257850966|gb|EEV74909.1| polyprenyl synthetase [Staphylococcus aureus A8115] gi|257854342|gb|EEV77291.1| polyprenyl synthetase [Staphylococcus aureus A6300] gi|257857959|gb|EEV80848.1| polyprenyl synthetase [Staphylococcus aureus A6224] gi|257864229|gb|EEV86979.1| polyprenyl synthetase [Staphylococcus aureus A5937] gi|262075441|gb|ACY11414.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98] gi|282589400|gb|EFB94491.1| geranyltranstransferase [Staphylococcus aureus A10102] gi|282764341|gb|EFC04467.1| geranyltranstransferase [Staphylococcus aureus A8117] gi|285817204|gb|ADC37691.1| Geranyltranstransferase (farnesyldiphosphate synthase) [Staphylococcus aureus 04-02981] gi|294968391|gb|EFG44415.1| geranyltranstransferase [Staphylococcus aureus A8819] gi|297177424|gb|EFH36676.1| geranyltranstransferase [Staphylococcus aureus A8796] gi|312829911|emb|CBX34753.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129799|gb|EFT85789.1| hypothetical protein CGSSa03_01898 [Staphylococcus aureus subsp. aureus CGS03] gi|329727336|gb|EGG63792.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21172] gi|329730812|gb|EGG67190.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21193] Length = 293 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + ++ Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGVK 66 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 67 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ FA Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|313633363|gb|EFS00206.1| geranyltranstransferase [Listeria seeligeri FSL N1-067] Length = 293 Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 + ++D+ LL + + +L ++ Y++ GGK+IR LV V+ + Sbjct: 7 FLEHYKKVVDESLLTEINKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALQVDPM 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ++V A+E IH YSLIHDDLP+MDN RRGK T H Y + TAI+AG+ LLT AF I Sbjct: 65 RGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVYGDATAILAGDALLTLAFSI 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 ++ + L R L+ ++ + G +GM+GGQ D++ E + ++ I KTG L Sbjct: 125 LAEDEN-LSFETRIGLINQISFSSGAEGMVGGQQADMEAENKQVTLAELTSIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + FA S A +A AS + +RLR F EN+GI FQ++DD+LD D K Sbjct: 184 LIFAVTSAAKIAEASIEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I] gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I] gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS] Length = 303 Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 130/237 (54%), Gaps = 16/237 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 L+E ++ ++ +LD+LL RL A+RYA+LGG K++R+ LV Sbjct: 11 WLRERAQHVEHVLDELLPGADIA-----PTRLHEAMRYAVLGGGKRVRAALVYAAGQACP 65 Query: 67 VNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 VN T R AA+E IH YSL+HDDLP MD+ +RRG+PTVH+Q+DE TA++AG Sbjct: 66 VNGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAG 125 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178 + L AFE+++ + + Q L G QGM GGQ +D+ + ++ Sbjct: 126 DALQPLAFELLA--GMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQ 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 184 TMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTA 240 >gi|190150135|ref|YP_001968660.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263471|ref|ZP_07545086.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915266|gb|ACE61518.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871114|gb|EFN02843.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 297 Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 86/241 (35%), Positives = 137/241 (56%), Gaps = 11/241 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M+ L + L +RI+ L T ++ L+ A+ YA LLGGK++R FL+ Sbjct: 1 MSYSLSTDLSVIQQRINDFLS-----TKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +V AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A Sbjct: 56 ATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ L ++AFE+I+ ++ L D+ + + + SL G +GM GQ LD +D ++ ++ Sbjct: 116 GDALQSFAFELIAQDES-LTDSQKVRQIQSLAQAAGARGMCLGQSLDLLAEDTAVNLAEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +I + KT AL+ + G ++ SQN K+ L + + +G+ FQ+ DD+LD + Sbjct: 175 ELIHRNKTSALIIASVLMGFNLSAHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETD 234 Query: 236 K 236 K Sbjct: 235 K 235 >gi|291538771|emb|CBL11882.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis XB6B4] Length = 296 Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 10/234 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 + +++ ++ + I+ L + + +T ++ A+ Y+ L GGK++R L+ E Sbjct: 2 DIKAEIGRHTDEAEQIITSYLPEEKGYQKT-----VIEAMNYSFLAGGKRLRPILMLETY 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF AAIE IH YSL+HDDLP+MDN RRGK T H+ Y E AI+AG+ Sbjct: 57 RLFGGRSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVF 178 LLTYAFE + N + + L+ G+ GM+GGQ +D++ E + ++ Sbjct: 117 LLTYAFETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLD 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I ++KT AL+ + GA++A A+ +E++ + +G+ FQ+ DD+LD Sbjct: 177 FIYRLKTSALIEASMMIGAVLAGATGSEQKIVEAVASKVGLAFQIQDDILDVTS 230 >gi|260767267|ref|ZP_05876208.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio furnissii CIP 102972] gi|260617775|gb|EEX42953.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio furnissii CIP 102972] gi|315180898|gb|ADT87812.1| geranyltranstransferase [Vibrio furnissii NCTC 11218] Length = 294 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 87/240 (36%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S N++++D L+ L N L+ A+RY LLGGK+ R +LV Sbjct: 1 MIEALSSFQHRNNEQLDLWLNRL---------PNQNLPLIEAMRYGLLLGGKRARPYLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+ Sbjct: 52 ITGQMLGCEPSDLDTPASAIECIHAYSLIHDDLPAMDDDELRRGKPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ + R +++ +L G QGM GQ LD+ E + + Sbjct: 112 GDALQTLAFTILAEGTLSDAGEMNRVKMIQALAEASGAQGMCLGQALDLAAENRLVALDE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A + L + + +G+ FQ+ DD+LD D Sbjct: 172 LENIHRNKTGALMRCAIRMGAMAAGHKGLDVLPHLDRYADAVGLAFQVQDDILDIISDTE 231 >gi|302751353|gb|ADL65530.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|320140593|gb|EFW32447.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MRSA131] gi|320144130|gb|EFW35899.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus MRSA177] Length = 288 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + ++ Sbjct: 2 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 61 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 62 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ FA Sbjct: 122 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 180 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 181 VMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224 >gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51] gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 289 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 128/234 (54%), Gaps = 12/234 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 +L++ ++ +D+ L L ++ Y+L GGK+IR L A Sbjct: 2 FQKELEDYARLVDSYLAQF---------PWPTGTLAESMNYSLSAGGKRIRPVLALAAAH 52 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + L A+E IH YSLIHDDLP+MDN RRG+ H + E AI+AG+ L Sbjct: 53 AVGGDCEDILPAVCALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGQAILAGDAL 112 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LTYAFE+I+ P + ++ + + + + G +GM+GGQMLD++ E ++ ++ + Sbjct: 113 LTYAFELIAQPMSGVEPQRQLRAIREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVH 172 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++KTGA++ A GAI+A ++ + E L + + +G+ FQ+ DD+LD E D Sbjct: 173 RLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESDSE 226 >gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50] gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50] Length = 303 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 130/237 (54%), Gaps = 16/237 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 L+E ++ ++ +LD+LL RL A+RYA+LGG K++R+ LV Sbjct: 11 WLRERAQHVEHVLDELLPGADIA-----PSRLHEAMRYAVLGGGKRVRAALVYAAGQACP 65 Query: 67 VNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 VN T R AA+E IH YSL+HDDLP MD+ +RRG+PTVH+Q+DE TA++AG Sbjct: 66 VNGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAG 125 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178 + L AFE+++ + + Q L G QGM GGQ +D+ + ++ Sbjct: 126 DALQPLAFELLA--GMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQ 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 184 TMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTA 240 >gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana] Length = 326 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 17/240 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58 +N L + I+ LD+ + +H + A+RY++L G K+ + Sbjct: 43 LNFDLRTYWTTLITEINQKLDEAI-------PVKHPAGIYEAMRYSVLAQGAKRAPPVMC 95 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 LF + L A A+E +H SLIHDDLP MD+ +RRGKP+ H Y AI+ Sbjct: 96 VAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAIL 155 Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176 AG+ L AF+ I S P + +L+ + +G GM GQ +D++ + Sbjct: 156 AGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLS- 214 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +Q+ K GA+ + G ++ A+++E + LR +G +G+++Q+ DD+ ED K Sbjct: 215 --FVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI---TEDKKK 269 >gi|328956986|ref|YP_004374372.1| geranyltranstransferase [Carnobacterium sp. 17-4] gi|328673310|gb|AEB29356.1| geranyltranstransferase [Carnobacterium sp. 17-4] Length = 299 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 82/221 (37%), Positives = 125/221 (56%), Gaps = 7/221 (3%) Query: 17 DTILDDLLLQTASHMQTQHNDR--LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 D ++ + ++ + L A+ Y+L GGK+IR L+ + Sbjct: 8 DKVIPSFEEEMLGYIGENGIKKAPLHEAMFYSLEAGGKRIRPLLLLATIQSLGGDIRKGY 67 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 V AA+E IH YSLIHDDLP+MDN +RRGKPT HI Y E TAI+AG+ LLT AFEII+ Sbjct: 68 AVSAALEFIHTYSLIHDDLPAMDNDDLRRGKPTSHIVYGEDTAILAGDALLTQAFEIIA- 126 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 + + +L+L+L + G +GM+ GQM DIQ E + ++ I + KTG L+ F Sbjct: 127 -VSDASPEKKVKLILALAKSAGPEGMILGQMADIQGETKDLSLEELQFIHRNKTGELLKF 185 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + ++A A+ +E+L + E++G+ +Q+ DD+LD Sbjct: 186 PIYAACVIADAATEVEEQLMGYAEHIGLAYQIRDDILDVIG 226 >gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54] Length = 303 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 86/241 (35%), Positives = 131/241 (54%), Gaps = 16/241 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62 P LQ + ++ +LDDLL + RL A+RYA+LGG K++R+ LV Sbjct: 7 AFPEWLQGRVRHVEDVLDDLLPPADA-----VPARLHEAMRYAVLGGGKRVRAALVYAAG 61 Query: 63 SLFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 V+ + R AA+E IH YSL+HDDLP MD+ +RRG+PT H+Q+DE TA Sbjct: 62 QACPVSGSVLAVEASLDRAAAAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATA 121 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE 174 ++AG+ L AFE+++S + + Q SL G QGM GGQ +D+ + Sbjct: 122 MLAGDALQPLAFELLAS--MPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSR 179 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + ++ MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 180 DDLQLMHSMKTGAMLACSVALGGIVAGASSASRQALDVYAQAMGLAFQVVDDILDVTADS 239 Query: 235 P 235 Sbjct: 240 A 240 >gi|196041614|ref|ZP_03108906.1| geranyltranstransferase [Bacillus cereus NVH0597-99] gi|229093237|ref|ZP_04224355.1| Geranyltranstransferase [Bacillus cereus Rock3-42] gi|196027602|gb|EDX66217.1| geranyltranstransferase [Bacillus cereus NVH0597-99] gi|228690211|gb|EEL44005.1| Geranyltranstransferase [Bacillus cereus Rock3-42] Length = 296 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F+ + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKKLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230 >gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902] gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902] Length = 296 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L + ++ LDD + + + L A+RY+LL GGK++R L Sbjct: 5 FDFKAYLGKAKDTVEAALDD-------SLGPERPESLRDAMRYSLLAGGKRLRPILCLAA 57 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+ Sbjct: 58 CELAGGEAKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGD 117 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT AFE+++ + +++ L+ G G++GGQ++D++ E +D + Sbjct: 118 ALLTRAFEMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEY 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ +GA++ +A LR + +G+ FQ+ DD+LD Sbjct: 178 IHLHKTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITA 230 >gi|30264253|ref|NP_846630.1| geranyltranstransferase [Bacillus anthracis str. Ames] gi|47529696|ref|YP_021045.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187080|ref|YP_030332.1| geranyltranstransferase [Bacillus anthracis str. Sterne] gi|49478571|ref|YP_038239.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141318|ref|YP_085511.1| geranyltranstransferase [Bacillus cereus E33L] gi|65321563|ref|ZP_00394522.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis str. A2012] gi|118479369|ref|YP_896520.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al Hakam] gi|165872980|ref|ZP_02217602.1| geranyltranstransferase [Bacillus anthracis str. A0488] gi|167638604|ref|ZP_02396880.1| geranyltranstransferase [Bacillus anthracis str. A0193] gi|170687399|ref|ZP_02878616.1| geranyltranstransferase [Bacillus anthracis str. A0465] gi|170709043|ref|ZP_02899473.1| geranyltranstransferase [Bacillus anthracis str. A0389] gi|177654844|ref|ZP_02936601.1| geranyltranstransferase [Bacillus anthracis str. A0174] gi|190565928|ref|ZP_03018847.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I] gi|196034877|ref|ZP_03102284.1| geranyltranstransferase [Bacillus cereus W] gi|196046422|ref|ZP_03113648.1| geranyltranstransferase [Bacillus cereus 03BB108] gi|218905314|ref|YP_002453148.1| geranyltranstransferase [Bacillus cereus AH820] gi|225866160|ref|YP_002751538.1| geranyltranstransferase [Bacillus cereus 03BB102] gi|227816954|ref|YP_002816963.1| geranyltranstransferase [Bacillus anthracis str. CDC 684] gi|228916814|ref|ZP_04080379.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929224|ref|ZP_04092251.1| Geranyltranstransferase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228947895|ref|ZP_04110182.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229186421|ref|ZP_04313585.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1] gi|229601140|ref|YP_002868472.1| geranyltranstransferase [Bacillus anthracis str. A0248] gi|254683942|ref|ZP_05147802.1| geranyltranstransferase [Bacillus anthracis str. CNEVA-9066] gi|254721777|ref|ZP_05183566.1| geranyltranstransferase [Bacillus anthracis str. A1055] gi|254736290|ref|ZP_05193996.1| geranyltranstransferase [Bacillus anthracis str. Western North America USA6153] gi|254754038|ref|ZP_05206073.1| geranyltranstransferase [Bacillus anthracis str. Vollum] gi|254757909|ref|ZP_05209936.1| geranyltranstransferase [Bacillus anthracis str. Australia 94] gi|301055671|ref|YP_003793882.1| geranyltranstransferase [Bacillus anthracis CI] gi|30258898|gb|AAP28116.1| geranyltranstransferase [Bacillus anthracis str. Ames] gi|47504844|gb|AAT33520.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181007|gb|AAT56383.1| geranyltranstransferase [Bacillus anthracis str. Sterne] gi|49330127|gb|AAT60773.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974787|gb|AAU16337.1| geranyltranstransferase [Bacillus cereus E33L] gi|118418594|gb|ABK87013.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al Hakam] gi|164711263|gb|EDR16818.1| geranyltranstransferase [Bacillus anthracis str. A0488] gi|167513452|gb|EDR88822.1| geranyltranstransferase [Bacillus anthracis str. A0193] gi|170126070|gb|EDS94967.1| geranyltranstransferase [Bacillus anthracis str. A0389] gi|170668594|gb|EDT19340.1| geranyltranstransferase [Bacillus anthracis str. A0465] gi|172080505|gb|EDT65591.1| geranyltranstransferase [Bacillus anthracis str. A0174] gi|190562847|gb|EDV16813.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I] gi|195992416|gb|EDX56377.1| geranyltranstransferase [Bacillus cereus W] gi|196022892|gb|EDX61573.1| geranyltranstransferase [Bacillus cereus 03BB108] gi|218538297|gb|ACK90695.1| geranyltranstransferase [Bacillus cereus AH820] gi|225790308|gb|ACO30525.1| geranyltranstransferase [Bacillus cereus 03BB102] gi|227007089|gb|ACP16832.1| geranyltranstransferase [Bacillus anthracis str. CDC 684] gi|228597048|gb|EEK54704.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1] gi|228811882|gb|EEM58216.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830514|gb|EEM76124.1| Geranyltranstransferase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843001|gb|EEM88084.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265548|gb|ACQ47185.1| geranyltranstransferase [Bacillus anthracis str. A0248] gi|300377840|gb|ADK06744.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI] Length = 296 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F+ + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230 >gi|239627502|ref|ZP_04670533.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239517648|gb|EEQ57514.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 303 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 131/242 (54%), Gaps = 15/242 (6%) Query: 1 MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57 MN +L+ + I+ ++ L + + H +T +L A+ Y+++ GGK++R L Sbjct: 1 MNDKETFKQELKTRTAEIEQLIKTYLPEESGHQKT-----ILEAMNYSMMTGGKRLRPML 55 Query: 58 VTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 + E LF + + AA+E IH SL+HDDLP MD+ +RRGKP+ ++ E Sbjct: 56 MQEMCRLFTGCLLESVIPFMAAVEMIHTSSLVHDDLPCMDDDMMRRGKPSTWAEFGEDIG 115 Query: 117 IIAGNGLLTYAFEIISSP-KTQLKDNIRSQL---MLSLTHNIGLQGMLGGQMLDIQDEF- 171 ++ G+ L+ YAFE +S +T + + S++ M L G+ GM+GGQ +D++ Sbjct: 116 VLTGDALMMYAFETAASAFETSIDPDELSRIGKAMGILARKTGVYGMIGGQTVDVELAGG 175 Query: 172 -IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 I + ++ I ++KTGAL+ + GA++ A+ + + + +G+ FQ+ DD+LD Sbjct: 176 PIPKDKLDFIYRLKTGALIEASMLIGAVLGGAADEDCKIVESLARKIGMAFQIQDDILDV 235 Query: 231 EE 232 Sbjct: 236 TG 237 >gi|293392564|ref|ZP_06636884.1| geranyltranstransferase [Serratia odorifera DSM 4582] gi|291424966|gb|EFE98175.1| geranyltranstransferase [Serratia odorifera DSM 4582] Length = 300 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 88/239 (36%), Positives = 127/239 (53%), Gaps = 10/239 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 S+LQ +R D L + + D ++ A+R+ ALLGGK++R FLV Sbjct: 2 SDFNSQLQVYRQRADDALLGFIAPL-----PFNKDAMVEAMRHGALLGGKRLRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +F V+ AAIECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG+ Sbjct: 57 GEMFGVSLNNLDVPAAAIECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAGD 116 Query: 122 GLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L T AF I++ + R ++ L G+ GM GGQ LD+ E I+ + Sbjct: 117 ALQTLAFSILADADMPDVALRDRLAMVSELAGASGVAGMCGGQALDLAAEGRQINLEALE 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I ++KTGAL+ A GA+ A +L + +G+ FQ+ DD+LD + K Sbjct: 177 QIHRLKTGALIRAAVRLGALAAGEPGRAALVQLDRYAAAIGLAFQVQDDILDVIGETAK 235 >gi|253733229|ref|ZP_04867394.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH130] gi|253728769|gb|EES97498.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH130] Length = 288 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + ++ Sbjct: 2 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 61 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 62 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ FA Sbjct: 122 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 180 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 181 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224 >gi|78223142|ref|YP_384889.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15] gi|78194397|gb|ABB32164.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15] Length = 297 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 85/235 (36%), Positives = 126/235 (53%), Gaps = 11/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + L+E +D L+ L + + A+RY++ GGK+IR L+ Sbjct: 2 DLKNYLKERCAIVDEALERSLP-----GEGDLPVSVHRAMRYSVFAGGKRIRPVLMLAAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 AL A+E IH YSLIHDDLP+MD+ RRG+PT H + E AI+AG+ Sbjct: 57 EAVGGTPDLALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKD--NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 LLT AF ++SSP+ K ++ + G +GM+GGQ++D++ E ID V Sbjct: 117 LLTEAFILMSSPEYAAKAGHARILPVIHEIGICAGSRGMVGGQVVDMESEGKKDIDLATV 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGALM + ++GAI+ A + + +GE +G+ FQ+ADD+LD E Sbjct: 177 QYIHTHKTGALMKASVKAGAILGGAEGDALAAMTRYGEAIGLAFQIADDILDIEG 231 >gi|302333198|gb|ADL23391.1| putative geranyltranstransferase [Staphylococcus aureus subsp. aureus JKD6159] Length = 288 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + ++ Sbjct: 2 NKLIDEVNNELSVAINKSVLDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 61 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 62 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ FA Sbjct: 122 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 180 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 181 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224 >gi|294139891|ref|YP_003555869.1| geranyltranstransferase [Shewanella violacea DSS12] gi|293326360|dbj|BAJ01091.1| geranyltranstransferase [Shewanella violacea DSS12] Length = 293 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 94/238 (39%), Positives = 138/238 (57%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L + +R+D+ L+ ++ QT + +LL+AI++ ALLGGK+IR FLV Sbjct: 2 LIDTITRYQQRVDSQLEKII-----DAQTITDPKLLAAIKHGALLGGKRIRPFLVYAIGD 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + N+ AAIEC+H YSLIHDDLP+MD+ +RRG+PTVH+ +DE TAI+AG+ L Sbjct: 57 MLNIPLKKLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 FEII P ++ + ++ +L G GM GGQ +D+ D+ ID + + Sbjct: 117 QALGFEIICEPIDGIEPSQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTKLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 K+KTGAL+ A E I A S E+ L F + +G+ FQ+ DD+LD E+L K Sbjct: 177 KLKTGALIRCAVELPMIAAQVSPEEQTLLLEFADTIGLAFQVQDDVLDIISSTEELGK 234 >gi|23502633|ref|NP_698760.1| geranyltranstransferase [Brucella suis 1330] gi|161619701|ref|YP_001593588.1| polyprenyl synthetase [Brucella canis ATCC 23365] gi|254703547|ref|ZP_05165375.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] gi|260568852|ref|ZP_05839320.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261754180|ref|ZP_05997889.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] gi|23348639|gb|AAN30675.1| geranyltranstransferase [Brucella suis 1330] gi|161336512|gb|ABX62817.1| Polyprenyl synthetase [Brucella canis ATCC 23365] gi|260154236|gb|EEW89318.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261743933|gb|EEY31859.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] Length = 304 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 113/235 (48%), Positives = 153/235 (65%), Gaps = 3/235 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 + L + ++ L LL + + RL++A+R+ L GGK++R FLV E A Sbjct: 7 DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ Sbjct: 67 ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180 LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + + Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEASIITL 186 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q MKTGAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241 >gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196] gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196] Length = 297 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 74/236 (31%), Positives = 115/236 (48%), Gaps = 9/236 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 M + + RI+ L LL +RL A+RY +LGG K++R L Sbjct: 1 MTADFQDWARSHQVRIENSLQTLLPAAD-----VAPERLHEAMRYTVLGGGKRVRPLLAF 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N A+E IH YSL+HDDLP MD+ +RRGKPT HI+Y E A++ Sbjct: 56 AAGELNKANEERVTIAAIAVELIHVYSLVHDDLPCMDDDVLRRGKPTCHIEYGEAIALLT 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQV 177 G+ L + AF++++ ++ +++ L G +GM GGQ +D+ + ++ Sbjct: 116 GDSLQSLAFQLLAEYSLADTPKMQLEMIRRLAQAAGSRGMAGGQAVDLASVGRTLSLPEL 175 Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA + + L F + +G+ FQ+ DD+LD E Sbjct: 176 EFMHIHKTGALIRAAVMLGAYCGSRLDEAQLAALDHFAKCIGLAFQVVDDVLDAEA 231 >gi|52080961|ref|YP_079752.1| polyprenyl synthetase,polyprenyl synthetase [Bacillus licheniformis ATCC 14580] gi|52786337|ref|YP_092166.1| YqiD [Bacillus licheniformis ATCC 14580] gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2] gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis ATCC 14580] gi|52348839|gb|AAU41473.1| YqiD [Bacillus licheniformis ATCC 14580] gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2] Length = 296 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 91/240 (37%), Positives = 134/240 (55%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M G L L+ I+ L + Q L ++ Y+L GGK++R LV Sbjct: 1 MTGKLEGFLKSRKTVIEERLPMYIKDL------QAPSILKESMLYSLEAGGKRLRPILVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H Y E TAI+A Sbjct: 55 ALLHAYGKDEEAGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKIYGEATAILA 114 Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176 G+ LLT +F++I S+ + + R +L+ L G +GM+GGQ+LD++ E + + Sbjct: 115 GDALLTESFKMITSNMPSDVSAEKRIRLVNELISAAGAEGMVGGQILDMEAESKSVSLDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I + KT L+ F+ +GAI+A AS+ E E+LR F ++GI FQ+ DD+LD E K Sbjct: 175 LQRIHEGKTAKLLSFSVIAGAILADASEKEIEKLREFSHHIGIGFQIRDDILDLEGSEDK 234 >gi|254518734|ref|ZP_05130790.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA] gi|226912483|gb|EEH97684.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA] Length = 291 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 8/207 (3%) Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 +N + + Y+L +GGK+IR L L+ N+ + + +AIE IH YSLIHDDLP Sbjct: 26 YNKIIYDSASYSLNIGGKRIRPILFLLTYGLYKENYKDVIEMASAIEMIHTYSLIHDDLP 85 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLT 151 MDN +RRG PT H ++ E A++AG+ LL A ++ S K K + S+ + Sbjct: 86 CMDNDDLRRGMPTNHKKFGENIAVLAGDMLLNEAMSLMIKFSIKNGAKALLASREI---A 142 Query: 152 HNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 G +GM+GGQ++D+ +E I + ++ + KTG L+ + + AI+A A + + E Sbjct: 143 EAAGPEGMIGGQIVDVINEGKLISKEELLYMHSKKTGELIRVSIIAAAILADAPKKDIEI 202 Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236 L FG LG+ FQ+ DD+LD D+ K Sbjct: 203 LNDFGLKLGLAFQIKDDILDITGDISK 229 >gi|15233848|ref|NP_195558.1| GGR (geranylgeranyl reductase); farnesyltranstransferase [Arabidopsis thaliana] gi|85680919|sp|Q39108|GGR_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase-related protein, chloroplastic; Flags: Precursor gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana] gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana] gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis thaliana] gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana] Length = 326 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 17/240 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58 +N L + I+ LD+ + +H + A+RY++L G K+ + Sbjct: 43 LNFDLRTYWTTLITEINQKLDEAI-------PVKHPAGIYEAMRYSVLAQGAKRAPPVMC 95 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 LF + L A A+E +H SLIHDDLP MD+ +RRGKP+ H Y AI+ Sbjct: 96 VAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAIL 155 Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176 AG+ L AF+ I S P + +L+ + +G GM GQ +D++ + Sbjct: 156 AGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLS- 214 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +Q+ K GA+ + G ++ A+++E + LR +G +G+++Q+ DD+ ED K Sbjct: 215 --FVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI---TEDKKK 269 >gi|240103885|ref|YP_002960194.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA) [Thermococcus gammatolerans EJ3] gi|239911439|gb|ACS34330.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA) [Thermococcus gammatolerans EJ3] Length = 343 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 17/237 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECA 62 L +++++ + +D I+ +L+ + + L A R Y L GGK++R F+V Sbjct: 6 ELFTRIRKLAGDVDKIILELVPE-------KEPKTLYDAARHYPLAGGKRVRPFVVLRAT 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + AL AA+E IH YSL+HDD+ MD +RRG+PTVH + AI+AG+ Sbjct: 59 EAVGGDPEKALYPAAAVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGINMAILAGDL 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFM 179 L + AFE ++ K R +L T N + GQ LDI+ E DE + Sbjct: 117 LFSKAFEAVAKAKVDPDKKARILEVLVKTSN----ELCEGQALDIEFETRDEVTVDEYLK 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL + GAI+ ++ + L +G N+GI FQ+ DD+LD D K Sbjct: 173 MISGKTGALFDGSATIGAIVGTDNEEYIQALSKWGRNVGIAFQIWDDVLDLIADEKK 229 >gi|289434644|ref|YP_003464516.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170888|emb|CBH27430.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 293 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 6/231 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L + ++D+ LL + + +L ++ Y++ GGK+IR LV V Sbjct: 4 LSLFLEHYKKVVDESLLTEINKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALQV 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + ++ ++V A+E IH YSLIHDDLP+MDN RRGK T H Y + TAI+AG+ LLT A Sbjct: 62 DPMSGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVYGDATAILAGDALLTLA 121 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F I++ + L R L+ ++ + G +GM+GGQ D++ E + ++ I KT Sbjct: 122 FSILAEDEN-LSFETRIGLINQISFSSGAEGMVGGQQADMEAENKQVTLAELTSIHARKT 180 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 G L+ FA S A +A AS + +RLR F EN+G+ FQ++DD+LD D K Sbjct: 181 GELLIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQISDDILDVIGDETK 231 >gi|167756949|ref|ZP_02429076.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402] gi|237734652|ref|ZP_04565133.1| geranyltranstransferase [Mollicutes bacterium D7] gi|167703124|gb|EDS17703.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402] gi|229382472|gb|EEO32563.1| geranyltranstransferase [Coprobacillus sp. D7] Length = 282 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 79/227 (34%), Positives = 133/227 (58%), Gaps = 10/227 (4%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75 + +++ + + ++ + ++ A++Y+L+ GGK+IR ++ + ++ N+ L + Sbjct: 2 ENLIEQINERLLEIIEEFGDSKVKEAMKYSLMAGGKRIRPVMMLQVIRSYDKNYQDYLDI 61 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AIE IH YSLIHDDLP MDN +RRG+ T H Q+DE TAI+AG+ LL A +I K Sbjct: 62 ACAIEMIHTYSLIHDDLPGMDNDDLRRGRLTCHKQFDEATAILAGDALLNEAVNVI--IK 119 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFAC 193 T++ D ++ L+ +L G+ GM+ GQ LD++ E Q+ +I KTG L+ A Sbjct: 120 TKVPDELKISLLATLYQASGINGMILGQALDMEYETKLATRDQLDLIHHHKTGDLISAAM 179 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GA++A + ++++ G +G+ FQ+ DD+LD D L KK Sbjct: 180 KMGALIA--NPDDQKTWVEIGYKIGLAFQIQDDVLDVVGDSSLLGKK 224 >gi|313205981|ref|YP_004045158.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868] gi|312445297|gb|ADQ81652.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868] gi|325336579|gb|ADZ12853.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer RA-GD] Length = 323 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 16/224 (7%) Query: 22 DLLLQT-ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 DL+ + H L + Y + GGK++R +V LF + A++ AI Sbjct: 9 DLVAEAIEKHQFKNEPKELYEPMNYIISHGGKRLRPIMVLMGCELFGGSLEKAMKPALAI 68 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E H ++LIHDD+ MD+ +RR KPT+H + I++G+ LL A++ L+ Sbjct: 69 EFFHNFTLIHDDI--MDDAPLRRNKPTIHTLHGINVGILSGDALLIKAYQFF----EDLE 122 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESG 196 + + + + + + GQ +D+ E + + KTG L + + G Sbjct: 123 PELFKKCITLFSETGAV--LCEGQQMDVNFETNSNVTYEDYIKMITYKTGVLSAASFKIG 180 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 A++A A++ E E L FG+++GI FQ+ DD LD + KK Sbjct: 181 AMIAGATEQEAEALYQFGKHIGIAFQIMDDYLDVFGNQEQFGKK 224 >gi|313638049|gb|EFS03327.1| geranyltranstransferase [Listeria seeligeri FSL S4-171] Length = 293 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 + ++D+ LL + + +L ++ Y++ GGK+IR LV + + Sbjct: 7 FLEHYKKVVDESLLTEINKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALQADPM 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 ++V A+E IH YSLIHDDLP+MDN RRGK T H Y + TAI+AG+ LLT AF I Sbjct: 65 RGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVYGDATAILAGDALLTLAFSI 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 ++ + L R L+ ++ + G +GM+GGQ D++ E + ++ I KTG L Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQQADMEAENKQVTLAELTSIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + FA S A +A AS + +RLR F EN+G+ FQ++DD+LD D K Sbjct: 184 LIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQISDDILDVIGDETK 231 >gi|188996777|ref|YP_001931028.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931844|gb|ACD66474.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 287 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 92/236 (38%), Positives = 137/236 (58%), Gaps = 14/236 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L+E + I+ LD + + + L +A+RY+L GGK+IR LV ECA Sbjct: 2 EFKNILKEKASFINKQLDRFVPRCI-------PEELSNAMRYSLEAGGKRIRPILVIECA 54 Query: 63 SLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +VN + + + E IH YSLIHDDLP+MD+ +RRGKPT H + E AI+AG Sbjct: 55 KAVKEDVNVEDFIDIAISTEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAG 114 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 +GLLT+AFE+IS+ +L +++ L+HN+G+ GM+GGQ DI F D V I Sbjct: 115 DGLLTFAFELISN-NKKLSAEKIVKVINILSHNVGIYGMVGGQAADILPNFKD---VEFI 170 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT + C+ G ++A A++ E +L+ +G N+G+ FQ+ DD+LD D K Sbjct: 171 HLNKTAKFLSACCQIGCVLADATEEEILKLKNYGINIGLAFQIWDDILDEIGDEEK 226 >gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442] gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B] gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442] Length = 296 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F+ + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYRQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230 >gi|82751126|ref|YP_416867.1| geranyltranstransferase [Staphylococcus aureus RF122] gi|258423175|ref|ZP_05686068.1| geranyltranstransferase [Staphylococcus aureus A9635] gi|82656657|emb|CAI81083.1| geranyltranstransferase [Staphylococcus aureus RF122] gi|257846625|gb|EEV70646.1| geranyltranstransferase [Staphylococcus aureus A9635] Length = 293 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 92/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + ++ Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 67 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E I+ + MI K KTGAL+ FA Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPINLETLEMIHKTKTGALLTFA 185 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|323440419|gb|EGA98131.1| geranyltranstransferase [Staphylococcus aureus O11] gi|323443193|gb|EGB00811.1| geranyltranstransferase [Staphylococcus aureus O46] Length = 288 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + ++ Sbjct: 2 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 61 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 62 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ FA Sbjct: 122 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 180 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 181 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224 >gi|84394354|ref|ZP_00993075.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01] gi|84375013|gb|EAP91939.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01] Length = 294 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 87/240 (36%), Positives = 123/240 (51%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S N+++++ LD L N L++A+RY LLGGK+ R FLV Sbjct: 1 MIETLLSYQARNNEQLNLWLDRL---------PHQNQNLINAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRG T HI+YDE TAI+ Sbjct: 52 ITGEMLGCTAEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R +++ L G QGM GQ LDI+ E + + Sbjct: 112 GDALQTLAFTILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + + KTGALM A GA+ A +L + + +G+ FQ+ DD+LD D Sbjct: 172 LEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTE 231 >gi|261252274|ref|ZP_05944847.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] gi|260935665|gb|EEX91654.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] Length = 294 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 122/240 (50%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N+ +++ L L N L+ A+RY LLGGK+ R FLV Sbjct: 1 MQEALTSFQQRNNDQLNLWLQAL---------PHQNQPLIEAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + +A+ECIH YSLIHDDLP+MD+ +RRG+ T HI++DE TAI+ Sbjct: 52 ITGQMLGCDKSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQTTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF I++ + R +++ L G GM GQ LD ++ + + Sbjct: 112 GDALQTLAFTILADGDLHPNAEVNRIKMIKVLADASGANGMCLGQALDLAAENRSVSLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGALM A GA+ A +L + + +G+ FQ+ DD+LD D Sbjct: 172 LEEIHRNKTGALMKSAIRLGALAAGEKGLEVMPQLDKYADAVGLAFQVQDDILDIVSDTE 231 >gi|86147429|ref|ZP_01065741.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222] gi|85834722|gb|EAQ52868.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222] Length = 294 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 87/240 (36%), Positives = 123/240 (51%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S N+++++ LD L N L++A+RY LLGGK+ R FLV Sbjct: 1 MIETLLSYQARNNEQLNLWLDRL---------PHQNQNLINAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRG T HI+YDE TAI+ Sbjct: 52 ITGEMLGCTAEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R +++ L G QGM GQ LDI+ E + + Sbjct: 112 GDALQTLAFTILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + + KTGALM A GA+ A +L + + +G+ FQ+ DD+LD D Sbjct: 172 LEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTE 231 >gi|77165502|ref|YP_344027.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707] gi|254434894|ref|ZP_05048402.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] gi|76883816|gb|ABA58497.1| farnesyl-diphosphate synthase [Nitrosococcus oceani ATCC 19707] gi|207091227|gb|EDZ68498.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] Length = 296 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 9/232 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 + R + L+ L + RL A+RYA+LGG K++R L Sbjct: 7 WVNALQARAERALEKTLPPANNP-----PKRLHEAMRYAVLGGGKRLRPLLTYSAGIALG 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V+ +A+E IH YSL+HDDLPSMDN +RRG PT H + E TA++AG+ L Sbjct: 62 VSEAVLDAPASAVELIHAYSLVHDDLPSMDNDSLRRGHPTCHKAFGETTALLAGDALQAL 121 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 AF ++ P + + + ++ L G +GM GGQ +D+ + +++ + ++K Sbjct: 122 AFRTLAEPTSAIPAKNQINMLELLAEAAGSRGMAGGQAIDLDSVGVQLTLSEMETMHRLK 181 Query: 185 TGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 TGAL+ + GA +Q+ E L F + +G+ FQ+ DD+LD E D Sbjct: 182 TGALIRASVLLGAWCHPEITQDTLENLDRFAQCIGLAFQIQDDVLDVESDTA 233 >gi|294793724|ref|ZP_06758861.1| geranyltranstransferase [Veillonella sp. 3_1_44] gi|294455294|gb|EFG23666.1| geranyltranstransferase [Veillonella sp. 3_1_44] Length = 292 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 12/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + + I+ L ++L + Q ++L ++ Y+L+ GGK+IR L Sbjct: 2 FKDYLASSKQNIEQWLGEVL-----NSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A+ECIH YSL+HDDLP+MDN RRG T H Y E AI+AG+GL Sbjct: 57 MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 LTYAF++++S T + + + G +GM+GGQ D +D+ I ++ ++ Sbjct: 117 LTYAFQLMTS-NTVASAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KTGAL + E G I+ A+ + L + LG++FQ+ DD+LD +L K Sbjct: 176 TGKTGALFNASVELGLILGCANNTTRTFLMEYSNCLGLLFQITDDILDVTGTIEELGK 233 >gi|229123698|ref|ZP_04252893.1| Geranyltranstransferase [Bacillus cereus 95/8201] gi|228659833|gb|EEL15478.1| Geranyltranstransferase [Bacillus cereus 95/8201] Length = 296 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F+ + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMKAEGKQLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230 >gi|283470800|emb|CAQ50011.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Staphylococcus aureus subsp. aureus ST398] Length = 293 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N H ++ Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTKHELGMK 66 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 67 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E I+ + MI K KTGAL+ FA Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPINLETLEMIHKTKTGALLTFA 185 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|303257087|ref|ZP_07343101.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47] gi|302860578|gb|EFL83655.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47] Length = 300 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 127/241 (52%), Gaps = 13/241 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 M ++ +R++ ++ L Q A +L SA+RY+++GG K++R LV Sbjct: 1 MTVAFKDWVKACQQRVEKAAENNLPQEALI-----PQKLHSAMRYSVIGGGKRVRPLLVY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +++ + A+EC+H YSLIHDDLP MDN +R GKPT H + E A++A Sbjct: 56 AVGQIYDADPENLDLTALAVECVHSYSLIHDDLPCMDNDILRHGKPTTHTAFGEAVAMLA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQ 176 G+ L AF + +T+L R +L+ L + +GM GGQ +D+ ++ + + Sbjct: 116 GDALQPEAFLFLV--RTKLPAEQRIKLVELLAYASSTRGMCGGQAIDLSVVGNQKMTIEE 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + ++ MKTGAL+ + GA SQ++ +L +G +G+ FQ+ DD+LD D Sbjct: 174 LRLMHSMKTGALLKASVLLGAFAGKKTPSQHDLSQLEVYGNAIGLAFQIVDDILDVVGDT 233 Query: 235 P 235 Sbjct: 234 A 234 >gi|75274213|sp|Q9LUD9|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3, chloroplastic; Short=GGPP synthase 3; Short=GGPS3; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3; AltName: Full=Dimethylallyltranstransferase 3; AltName: Full=Farnesyl diphosphate synthase 3; AltName: Full=Farnesyltranstransferase 3; AltName: Full=Geranyltranstransferase 3; Flags: Precursor gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 360 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 81/244 (33%), Positives = 124/244 (50%), Gaps = 17/244 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + ++ ++ LD + + + A+RY+LL GGK++R L Sbjct: 64 FDFKLYMIRKAESVNAALD-------VSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 116 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+ Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176 Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL AFE ++ + L R + ++ L IG G++ GQM+D+ E ++ Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLE 236 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 + I KT AL+ A G IM ++ E E+LR + +G++FQ+ DD+LD E Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296 Query: 233 DLPK 236 +L K Sbjct: 297 ELGK 300 >gi|332686260|ref|YP_004456034.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/ geranyltranstransferase [Melissococcus plutonius ATCC 35311] gi|332370269|dbj|BAK21225.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/ geranyltranstransferase (farnesyldiphosphate synthase)/ geranylgeranyl pyrophosphate synthetase [Melissococcus plutonius ATCC 35311] Length = 296 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 86/233 (36%), Positives = 127/233 (54%), Gaps = 12/233 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 K ID I ++ SH Q L A+ Y++ GGK++R L+ + FN Sbjct: 8 KQKHIDRIEKEMANFIESHTSDQS---LKKAMLYSIQAGGKRLRPLLLLATINSFNCPIE 64 Query: 71 T-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A + AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF+ Sbjct: 65 QGAYQTAAALEMLHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEALAILAGDGLLTGAFQ 124 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGA 187 +++ + I +L T G +GM+ GQ D+Q E ++ ++ + + KTGA Sbjct: 125 LLALSTIEAGKKILLTQLLGQT--AGTEGMVAGQSGDLQGEKKALNLQELSEVHRKKTGA 182 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 L+ F+ +G I+A+ S+ L+ G+ FQ+ DDLLD EE KK Sbjct: 183 LIEFSFMAGGILANQSEEIIYLLKQLANAFGLAFQIRDDLLDVIGSEEKQGKK 235 >gi|170727812|ref|YP_001761838.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908] gi|169813159|gb|ACA87743.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908] Length = 293 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 92/238 (38%), Positives = 137/238 (57%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L + +R+D L ++ Q+ + +LL+A+++ AL+GGK+IR FLV Sbjct: 2 LAQATTQYQQRVDNQLTQVI-----DAQSVTDSQLLAAMKHGALIGGKRIRPFLVYAIGE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + NV AAIECIH YSLIHDDLP+MD+ +RRG+PTVH+ +DE TAI+AG+ L Sbjct: 57 MLNVPQEKLDAAAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 AF+I+S P L ++ +L G GM GGQ +D+ D+ ID + + Sbjct: 117 QALAFDILSQPIDGLTPTQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 K+KTGAL+ A E I A ++E+ L F + +G+ FQ+ DD++D E+L K Sbjct: 177 KLKTGALIRCAVELPMIAADLPKDEQALLMTFADAVGLAFQVQDDVIDIISSTEELGK 234 >gi|58584994|ref|YP_198567.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419310|gb|AAW71325.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 305 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 89/249 (35%), Positives = 131/249 (52%), Gaps = 39/249 (15%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+ + + +RL+SA+RY LL K IR FLV + +FNV + + A+EC Sbjct: 10 LITEINKILPEDSQNRLISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVEC 69 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSLIHDDLP MDN RRG+ + H ++D+ TA++AG+ LLT AFEI+SS N Sbjct: 70 IHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNEG--SN 127 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLD--------IQDEFIDETQ----------------- 176 R +++ +L+ IG +GM+GGQ+LD +++D Sbjct: 128 KRCEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTL 187 Query: 177 -----------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + I MKT L +CE GAI+ A+ ++ L +G NLG+IFQ D Sbjct: 188 GSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATDKQRRALYNYGVNLGLIFQAKD 247 Query: 226 DLLDCEEDL 234 D+ D ++D Sbjct: 248 DIRDYKQDE 256 >gi|226941241|ref|YP_002796315.1| IspA [Laribacter hongkongensis HLHK9] gi|226716168|gb|ACO75306.1| IspA [Laribacter hongkongensis HLHK9] Length = 297 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 8/237 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 + + + + ++T L L T L A+RYA L GGK++R LV Sbjct: 3 DTDFLRWMTDIQQHVETALAASLP-----AGTHAATPLFDAMRYAALDGGKRVRPLLVFA 57 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + A+ECIH YSL+HDDLP MD+ +RRGKPT HI + E A++AG Sbjct: 58 AGDVSGATPEALSAAACAVECIHAYSLVHDDLPCMDDDVLRRGKPTCHIAHGEAMALLAG 117 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178 + L +AFE+++ P + + ++ +L H G +GM GGQ +D +D+T + Sbjct: 118 DALQAHAFELLAIPLPGVVPARQLAMVSALAHAAGPRGMCGGQAIDLAAVGHALDQTALE 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ +E L + +G+ FQ+ DD+LDCE D Sbjct: 178 YMHCLKTGALIQAAVRLGALAGSPDDDELAALDRYARRIGLAFQVIDDVLDCEADSA 234 >gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis thaliana] Length = 360 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 81/244 (33%), Positives = 124/244 (50%), Gaps = 17/244 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + ++ ++ LD + + + A+RY+LL GGK++R L Sbjct: 64 FDFKLYMIRKAESVNAALD-------VSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 116 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+ Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176 Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL AFE ++ + L R + ++ L IG G++ GQM+D+ E ++ Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRAVVELARTIGTTGLVAGQMIDLASERLNPDKVGLE 236 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 + I KT AL+ A G IM ++ E E+LR + +G++FQ+ DD+LD E Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296 Query: 233 DLPK 236 +L K Sbjct: 297 ELGK 300 >gi|255065407|ref|ZP_05317262.1| geranyltranstransferase [Neisseria sicca ATCC 29256] gi|255050232|gb|EET45696.1| geranyltranstransferase [Neisseria sicca ATCC 29256] Length = 298 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 84/241 (34%), Positives = 132/241 (54%), Gaps = 12/241 (4%) Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57 MN L + Q+ + + +L+ L + Q L A+RY L GGK++R L Sbjct: 1 MNPANELKAWQQKAQAQTELLLERFLPS-----ENQVPHTLHEAMRYVTLGGGKRLRPLL 55 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V + L + + + AAIE +H YSL+HDD+P+MDN +RRGKPT H++YDE TA+ Sbjct: 56 VLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATAL 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175 + G+ L T AF+++S P T L + ++ +L G GM GGQ +D+ + + +++ Sbjct: 116 LVGDALQTQAFDVLSRP-TGLPAERQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQA 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 Q+ + +KTG L+ A GA+ N+ L + LG+ FQ+ DD+LDCE D Sbjct: 175 QLEQMHSLKTGTLIRAAVVLGALACPDLDSNDVRTLDNYAAKLGLAFQVIDDVLDCEADT 234 Query: 235 P 235 Sbjct: 235 A 235 >gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531] gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531] Length = 291 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 9/231 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + +E + ++ L L +T +D L A+ Y+L+ GGK++R L+ A Sbjct: 1 MKERWRERQELVERALQAELDRTD-----VLDDTLRQAMAYSLMAGGKRLRPVLLMAAAD 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + L V A+E IH YSLIHDDLP+MDN RRGK T H + + AI+AG+GL Sbjct: 56 AVGADGAKFLSVACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 LT AF +I + + + +++ ++ G +GM+GGQ+LD++ E I ++ + Sbjct: 116 LTLAFTVILRQQN-VSADTLLRVVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVH 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTGAL A SGAI+ AS+ + L + E G+ FQ+ DD+LD Sbjct: 175 MGKTGALFRAALRSGAILGGASEAQLAALTTYAEQFGLAFQITDDILDVIG 225 >gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 343 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 13/248 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVT 59 + S + +K I+ LD+ + + + + A+RY LL GGK++R L Sbjct: 36 DSEFISYMNNKAKSINKALDNSIPLCNNSVPLWEPVLEVHKAMRYTLLSGGKRVRPMLCL 95 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L TA+ A+E IH SLI DDLP MD+ +RRG PT H + E T+I+A Sbjct: 96 VACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGIPTNHKVFGEKTSILA 155 Query: 120 GNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-------IQDEF 171 N L++ A + ++S + + + + +G +G++ GQ D ++E Sbjct: 156 SNALMSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNED 215 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + + ++ KT L+ A GAIM S E ERL+ + +G++FQ+ DD+LD Sbjct: 216 DELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDET 275 Query: 232 ---EDLPK 236 E+L K Sbjct: 276 KSSEELGK 283 >gi|163749512|ref|ZP_02156760.1| geranyltranstransferase [Shewanella benthica KT99] gi|161330921|gb|EDQ01848.1| geranyltranstransferase [Shewanella benthica KT99] Length = 293 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 89/238 (37%), Positives = 137/238 (57%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L + +R+D+ L+ + QT + +LL+A+++ ALLGGK+IR FLV Sbjct: 2 LVDTITRYQQRVDSQLEKIFDN-----QTVTDPKLLAAMKHGALLGGKRIRPFLVYAIGD 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + ++ AAIEC+H YSLIHDDLP+MD+ +RRG+PTVH+ +DE AI+AG+ L Sbjct: 57 MLSIPLKQLDSSAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEAAAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 AFE++ P ++ ++ +L G GM GGQ +D+ ++ ID + + Sbjct: 117 QALAFEVMCEPIDEIAPRQNLAMVRALAKASGYSGMCGGQAMDLSATNKPIDLATLSQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 K+KTGAL+ A E I A SQ E+ L F + +G+ FQ+ DD+LD ++L K Sbjct: 177 KLKTGALIRCAVELPMIAAQVSQEEQTLLMEFADAIGLAFQVQDDVLDIISSTDELGK 234 >gi|315639632|ref|ZP_07894772.1| geranyltranstransferase [Enterococcus italicus DSM 15952] gi|315484593|gb|EFU75049.1| geranyltranstransferase [Enterococcus italicus DSM 15952] Length = 289 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 125/212 (58%), Gaps = 9/212 (4%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIH 89 + + ++L ++RY++ GGK+IR L+ +L+ N A+ +V AA+E +H YSLIH Sbjct: 21 EQTNEEQLAESMRYSVEAGGKRIRPLLLASTYALYQKNVSQAVCQVAAAVELVHTYSLIH 80 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DDLP+MDN +RRGKPT H + E AI+AG+GLLT AF+++ +L D+ + + Sbjct: 81 DDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTLAFQVLGQA--ELADDKKVACLTL 138 Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 L G GM+ GQ DI+ E + Q+ I KTG L+ F+ +G I+ AS E+ Sbjct: 139 LAQTAGTLGMVAGQAADIEAEGKQLSLEQLQGIHARKTGELIRFSVIAGGIIGGASAKEQ 198 Query: 208 ERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 +L F LG+ FQ+ DDLLD E+L K Sbjct: 199 AQLDSFARKLGLAFQIKDDLLDVLATTEELGK 230 >gi|300715575|ref|YP_003740378.1| Geranyltranstransferase [Erwinia billingiae Eb661] gi|299061411|emb|CAX58523.1| Geranyltranstransferase [Erwinia billingiae Eb661] Length = 299 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 125/242 (51%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 L + R++ L + N L++A+ Y ALLGGK++R FLV Sbjct: 2 DFSDLLTAHHTRVNQALQRFIAPL-----PFQNSPLVNAMEYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E TAI+AG+ Sbjct: 57 EMLGADDAALDAPAAAVECIHAYSLIHDDLPAMDDDSLRRGQPTCHIKFGEDTAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P + R ++ L G+ GM GGQ LD+ E +D + Sbjct: 117 LQTLAFSILADTPMPGVSAEYRVAMLSELAQASGVAGMCGGQALDLAAEGQQVDLAALEQ 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + +G+ FQ+ DD+LD D + Sbjct: 177 IHRHKTGALIRSAVRLGALAAGERGRAALPALDRYANAIGLAFQVQDDILDVVGDTAIIG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|296533686|ref|ZP_06896240.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957] gi|296265985|gb|EFH12056.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957] Length = 300 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 101/239 (42%), Positives = 146/239 (61%), Gaps = 12/239 (5%) Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57 M G L + L+E + I+ LD LL Q +L +A+RY++LGG K++R FL Sbjct: 1 MTGDTPLSAALREAAAEIEHTLDMLLPQEEGP-----EAKLYAAMRYSVLGGGKRMRGFL 55 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V E A+ F V+ ++ALRV AAIE +H YSL+HDDLP+MDN +RRGKPT H Y E TAI Sbjct: 56 VLEGAAQFGVSRVSALRVAAAIEMLHAYSLVHDDLPAMDNDELRRGKPTTHRAYGEATAI 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFID 173 +AG+ L +AF +++ T +R++L L L G +GM GGQMLD+ E + Sbjct: 116 LAGDALQAHAFAVLAGEDTHSDPAVRAELCLRLALAAGSKGMCGGQMLDMLAEEATEALS 175 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 E+ + +Q +KTG L+ F+ E+GA++ A ++ L +G LG FQ+ADD+LD Sbjct: 176 ESAIGRLQLLKTGKLIEFSAEAGAVLGKAPGPQRHALCAYGRELGAAFQIADDILDATA 234 >gi|218710368|ref|YP_002417989.1| geranyltranstransferase [Vibrio splendidus LGP32] gi|218323387|emb|CAV19564.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio splendidus LGP32] Length = 294 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 87/240 (36%), Positives = 123/240 (51%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S N+++++ LD L N L++A+RY LLGGK+ R FLV Sbjct: 1 MIETLLSYQARNNEQLNLWLDRL---------PHQNQNLINAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRG T HI+YDE TAI+ Sbjct: 52 ITGEMLGCTAEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R +++ L G QGM GQ LDI+ E + + Sbjct: 112 GDALQTLAFTILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + + KTGALM A GA+ A +L + + +G+ FQ+ DD+LD D Sbjct: 172 LEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTE 231 >gi|298694804|gb|ADI98026.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED133] Length = 293 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + ++ Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 67 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ FA Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLEILEMIHKTKTGALLTFA 185 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+ KE L + +LG++FQ+ DDLLDC D K Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma] Length = 338 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 12/234 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + I+ LD S + +L A+RY LL GGK++R + Sbjct: 44 FDFKSYMINKITSINEALD-------SAVPLIEPIKLHEAMRYTLLSGGKRVRPIVCIAA 96 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + T + A E IH S++ DDLP MDN RRGK + H Y E ++A Sbjct: 97 CELVGGHESTVMPTACAQEMIHSMSVMLDDLPCMDNDDFRRGKLSNHRVYGEKITLLAVR 156 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD----IQDEFIDETQV 177 L A + + + + + + + G +G GQ+ D +D + Q+ Sbjct: 157 SLQALAVDHVVTATRGVPPERLVRALTEMAILTGSKGAAAGQIADLCSSGEDFNVSIEQL 216 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I KTG L + SGAI+ AS+ E E+LR F + +G++FQ+ DD+LD Sbjct: 217 EHIHMQKTGTLCEGSVVSGAIIGGASEEEIEKLRKFSKCIGLMFQIVDDVLDVT 270 >gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] Length = 290 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 12/234 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 +L++ ++ +D+ L L ++ Y+L GGK+IR L A Sbjct: 3 FQKELEDYARLVDSYLAQF---------PWPTGTLAESMNYSLSAGGKRIRPVLALAAAH 53 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + L A+E IH YSLIHDDLP+MDN RRG+ H + E AI+AG+ L Sbjct: 54 AVGGDCEDILPAVCALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGQAILAGDAL 113 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LTYAFE+++ P + + + + + + G +GM+GGQMLD++ E ++ ++ + Sbjct: 114 LTYAFELLAQPMSGVDSQRQLRAVREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVH 173 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++KTGA++ A GAI+A ++ + E L + + +G+ FQ+ DD+LD E D Sbjct: 174 RLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESDSE 227 >gi|317047156|ref|YP_004114804.1| polyprenyl synthetase [Pantoea sp. At-9b] gi|316948773|gb|ADU68248.1| Polyprenyl synthetase [Pantoea sp. At-9b] Length = 299 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 88/237 (37%), Positives = 126/237 (53%), Gaps = 10/237 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 L +R++ L LL + L++A++Y ALLGGK++R FLV Sbjct: 2 DFAKLLSAYHERVNLALTRLLDPL-----PFQSSPLVNAMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI+Y E TAI+AG+ Sbjct: 57 EMLKADPASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P + R ++ L G+ GM GGQ LD+ E ID Q+ Sbjct: 117 LQTLAFSILADQPMPGVSAEARITMISELAQASGVAGMCGGQALDLAAEGQSIDLAQLEQ 176 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A GA+ A + L + +G+ FQ+ DD+LD D Sbjct: 177 IHRHKTGALIRAAVRLGALAAGEQGRAALPVLDVYANAIGLAFQVQDDILDVVGDTA 233 >gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776] gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776] Length = 318 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 89/237 (37%), Positives = 126/237 (53%), Gaps = 7/237 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 L+E K+I+ +D L T + L ++RY AL GGK++R LV + Sbjct: 23 EFTQHLRELQKQIEMAMDTALSAT-PDVTRFVPPSLFESMRYSALGGGKRLRPVLVLLAS 81 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + L A+ A+E IHCYSLIHDDLP+MD+ +RRG+PT HI Y E TAI+AG+G Sbjct: 82 EACGADPLQAMPAAVALEMIHCYSLIHDDLPAMDDDDLRRGRPTNHIVYGEATAILAGDG 141 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179 LLT AFE++++ + + + L G GM+GGQ D+ E ++ Sbjct: 142 LLTRAFEVLATEISN--KELALACVADLASAAGWCGMVGGQAADLAAETTPVTTLAELEQ 199 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTG L+ A G + AS + E L +G +G+ FQ+ADDLLD E K Sbjct: 200 IHHRKTGRLLACALTMGGRLGGASVQQLESLARYGFAIGLAFQIADDLLDVEGSSEK 256 >gi|149377246|ref|ZP_01894993.1| geranyltranstransferase [Marinobacter algicola DG893] gi|149358434|gb|EDM46909.1| geranyltranstransferase [Marinobacter algicola DG893] Length = 299 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 86/236 (36%), Positives = 133/236 (56%), Gaps = 10/236 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60 N L + L++ +ID L+ L Q ++RL A+RY++LGG K+IR L Sbjct: 5 NTRLAAFLEQCRNQIDAELERQLC-----ASGQGSERLQQAMRYSVLGGGKRIRPALCLA 59 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A+ +A+ ++E IH YSLIHDDLP+MDN +RRG+ T HI +DE TAI+AG Sbjct: 60 AATALGQPRESAIVPACSLELIHAYSLIHDDLPAMDNDDLRRGRATTHIAFDEATAILAG 119 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178 + L T AF ++ + D +R ++ L G QGM GGQ +D++ + + Q+ Sbjct: 120 DALQTLAFGWLAEA-PGVDDQVRLAMIRELATASGHQGMAGGQAIDLESVGKQLTVEQLE 178 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KTGAL+ + GA+ A ++++ L + + LG+ FQ+ DDLLD E D Sbjct: 179 NMHRHKTGALIAASVRMGALTATDVNEDQLAALTVYSQTLGLAFQVQDDLLDIEGD 234 >gi|225677225|ref|ZP_03788218.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590749|gb|EEH11983.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 263 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 9/212 (4%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+++ + ++L+SA+RY LL K IRSFLV + +FN + V AAIE Sbjct: 10 LIVEVNRLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H YSLIHDDLP MDN RR + + H ++DE TA++AG+ LLT AFE++SS + Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSL-----NE 124 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 R +++ L+ IG++GM+GGQ LDI D ++ I MKT L +CE GAI+ + Sbjct: 125 KRCEIIKVLSQAIGIRGMVGGQALDI---GADFNKIKEIHLMKTAKLFAASCEIGAIIGN 181 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A +++ L +G NLG+IFQ DD+ D E+D Sbjct: 182 AIDKQRKALYNYGINLGLIFQAKDDIEDYEQD 213 >gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2] gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2] Length = 296 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 92/235 (39%), Positives = 135/235 (57%), Gaps = 10/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + L + ++ LD LL + + A+RY+LL GGK+IR L A Sbjct: 2 DIKQYLNHRCQEVEQALDQLLPPIEGPLAGH-----VEAMRYSLLAGGKRIRPILCLAAA 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + L V AA+ECIH YSLIHDDLP+MD+ +RRG PT H ++ E AI+AG+G Sbjct: 57 EALPTDSRPLLPVAAALECIHTYSLIHDDLPAMDDDDLRRGNPTCHKKFGEAAAILAGDG 116 Query: 123 LLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 LL++AFE+++ P + + L+ ++ IG GM+GGQ+LDI+ E I+ Q+ Sbjct: 117 LLSFAFELLARPLATKNISAGEQLHLIGNIAAAIGPMGMVGGQVLDIEAEGRQIELEQLQ 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I + KTGAL+ A +SGAI A + + E L +GE +G+ FQ+ DDLL+ D Sbjct: 177 QIHRCKTGALITVAVQSGAIGGGADRRQYEALTSYGEQIGLAFQIVDDLLNVTGD 231 >gi|256114345|ref|ZP_05455078.1| Polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|265995644|ref|ZP_06108201.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|262766928|gb|EEZ12546.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] Length = 304 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 113/235 (48%), Positives = 153/235 (65%), Gaps = 3/235 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 + L + ++ L LL + + RL++A+R+ L GGK++R FLV E A Sbjct: 7 DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ Sbjct: 67 ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180 LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + + Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q MKTGAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241 >gi|94676522|ref|YP_588724.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219672|gb|ABF13831.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 304 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 94/234 (40%), Positives = 135/234 (57%), Gaps = 9/234 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L SKLQ++S I+ +L+ L +S N L++A+R AL GGK++R FL+ + Sbjct: 10 DLISKLQKSSNYIEIVLEQHLCTLSSK-----NKILVTAMRSALTGGKRLRPFLIYQTGK 64 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF + + AAIECIH YSLIHDDLP+MDN +RRGKPT HIQ+ E AI+AG+ L Sbjct: 65 LFGIKKHSLNAAAAAIECIHAYSLIHDDLPAMDNHKLRRGKPTCHIQFGEKIAILAGDAL 124 Query: 124 LTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 T AF I+++ + + +R +++ L + G GM GQ L+++ +F + V I Sbjct: 125 HTLAFTILANAQMPAIPIKVRLKMIEILANASGANGMCLGQALELESQFKKMSAKAVETI 184 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ A GAI A S+ L + +G+ FQ+ DDL D ED Sbjct: 185 YSYKTGALIRAAVHIGAIAAGNKSKLAINYLDRYATAIGLAFQVQDDLWDISED 238 >gi|39996864|ref|NP_952815.1| geranyltranstransferase [Geobacter sulfurreducens PCA] gi|39983752|gb|AAR35142.1| geranyltranstransferase [Geobacter sulfurreducens PCA] gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens KN400] Length = 297 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 82/235 (34%), Positives = 129/235 (54%), Gaps = 11/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L L+E +D L+ L + + + A+RY++ GGK++R L+ Sbjct: 2 DLKGYLKERCALVDEALERHLP-----AEDELPSSVHRAMRYSVFAGGKRVRPILMLAAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + AL A+E IH YSLIHDDLP+MD+ RRG+PT H + E AI+AG+ Sbjct: 57 DAVGGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDA 116 Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 LLT AF +ISSP + + ++ + G +GM+GGQ++D++ E ID V Sbjct: 117 LLTEAFILISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATV 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTGAL+ + ++GA++ A+ + + + +GE +G+ FQ+ADD+LD E Sbjct: 177 QYIHTRKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEG 231 >gi|312137122|ref|YP_004004459.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Methanothermus fervidus DSM 2088] gi|311224841|gb|ADP77697.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase [Methanothermus fervidus DSM 2088] Length = 322 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 15/232 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 L++ SK I+ + + + + L+ A GGK+IR LV Sbjct: 3 YLEKYSKLIEEEIRKNISDIEPTELYKSSAHLIEA------GGKRIRPSLVLLSTESVGG 56 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AL AIE IH +SLIHDD+ MD +RRG+ TVH+ + E AI+AG+ L + A Sbjct: 57 KIEDALNAATAIELIHTFSLIHDDI--MDKDEVRRGRATVHVIWGEPLAILAGDVLFSKA 114 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMK 184 FE++ K ++ +++ + GQ D+ E + E + + K Sbjct: 115 FEVMLKSNIDEKRLVKVLDVMTKA----CVNLCKGQAYDMLFEKNFEVKEKEYLEMIYYK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 T +L+ + + GAI+ + S+ E L +G+ LG+ FQ+ DD LD D + Sbjct: 171 TASLIAASTKIGAIIGNGSKEEINALYNYGKFLGLAFQIHDDYLDIAGDEKQ 222 >gi|153853044|ref|ZP_01994453.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814] gi|149753830|gb|EDM63761.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814] Length = 300 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 12/239 (5%) Query: 1 MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57 MN +++ I+ IL + L + + + ++ A+ Y+L+ GGK++R L Sbjct: 1 MNSKEEFTVQMKRKVAEIEEILKEYLPKPEGYQKV-----IMEAMEYSLMAGGKRLRPML 55 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 + E + LF AA+E IH YSL+HDDLP+MDN RRG+ T HI Y E I Sbjct: 56 MRETSRLFGDETEALCPFMAALEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGI 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQD--EFID 173 +AG+ LL YAFE + + L G+ GM+GGQ++D+++ + Sbjct: 116 LAGDALLNYAFETAFRAFETAPQESLKIGRALSVLGRKAGVYGMIGGQVIDVKETGHAVP 175 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + I ++KTGAL+ A GAI+ A + + ++ +GI FQ+ DD+LD Sbjct: 176 KDVLDTIYELKTGALIECAMMIGAILGGAEEEDVRKVEKIAHYVGIAFQIQDDILDVTS 234 >gi|322514115|ref|ZP_08067184.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976] gi|322120026|gb|EFX92005.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976] Length = 297 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 86/241 (35%), Positives = 136/241 (56%), Gaps = 11/241 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M+ L + L +RI+ L T + L+ A+ YA LLGGK++R FL+ Sbjct: 1 MSYSLSTDLTAIQQRINDFLA-----TKLQAHQAYGSPLIDAMSYAVLLGGKRVRPFLIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + V+ AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A Sbjct: 56 ATGRMLGVSLEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDETTAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ L ++AFE+I+ ++ L D+ + + +L G +GM GQ LD +D+ ++ ++ Sbjct: 116 GDALQSFAFELIAQDES-LTDSQKVWQIQALAQAAGARGMCLGQSLDLLAEDKAVNLAEL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +I + KTGAL+ + G + SQN K+ L + + +G+ FQ+ DD+LD + Sbjct: 175 ELIHRNKTGALIVASVLMGFNSSAHSQNLAVKQPLERYAQAIGLAFQVQDDILDVIGETD 234 Query: 236 K 236 K Sbjct: 235 K 235 >gi|295093395|emb|CBK82486.1| Geranylgeranyl pyrophosphate synthase [Coprococcus sp. ART55/1] Length = 294 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 77/231 (33%), Positives = 124/231 (53%), Gaps = 9/231 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 + E + RI+ I++ L +T + A+ Y++ GGK++R L+ E LF Sbjct: 6 IAEKAARINDIVESYLPPADGFNRT-----VCEAMAYSVEAGGKRLRPMLMEETYRLFGG 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AAIE IH YSLIHDDLP++DN RRG+ T H+ + E AI+AG+ LL YA Sbjct: 61 KSEVIKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRKTSHVVFGEAMAILAGDALLNYA 120 Query: 128 FEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184 +E +D + + M L G+ GM+GGQ++D++ + + + Q+ + + K Sbjct: 121 YETACKAFGMGEDIHAVASAMCVLAQKPGINGMIGGQVVDVEMTGKELSKEQLEYVYENK 180 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 TGAL+ + GAI+A A + + + ++G+ FQ+ DD+LD D Sbjct: 181 TGALIEASMMIGAILAGADEAKVAAVHKIASDVGMAFQIQDDILDVCGDSA 231 >gi|186510058|ref|NP_188073.2| GGPS3 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 3); farnesyltranstransferase [Arabidopsis thaliana] gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana] Length = 360 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 81/244 (33%), Positives = 124/244 (50%), Gaps = 17/244 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + ++ ++ LD + + + A+RY+LL GGK++R L Sbjct: 64 FDFKLYMIRKAESVNAALD-------VSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 116 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+ Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176 Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL AFE ++ + L R + ++ L IG G++ GQM+D+ E ++ Sbjct: 177 ALLALAFEHMTFVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLE 236 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 + I KT AL+ A G IM ++ E E+LR + +G++FQ+ DD+LD E Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296 Query: 233 DLPK 236 +L K Sbjct: 297 ELGK 300 >gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603] gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603] Length = 297 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 80/233 (34%), Positives = 131/233 (56%), Gaps = 10/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 5 AFDAFLKESKTFVEENLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLFATL 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G Sbjct: 59 QAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118 Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAF+ I++ + ++ + +L+L L G +GM+ GQ+ D++ E + ++ Sbjct: 119 LLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 179 IHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEG 231 >gi|163845354|ref|YP_001623009.1| hypothetical protein BSUIS_B1253 [Brucella suis ATCC 23445] gi|163676077|gb|ABY40187.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 304 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 113/235 (48%), Positives = 153/235 (65%), Gaps = 3/235 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 + L + ++ L LL + + RL++A+R+ L GGK++R FLV E A Sbjct: 7 DFTTLLNRRAMEVEAALAGLLDECPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ Sbjct: 67 ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180 LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + + Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q MKTGAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241 >gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579] gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579] Length = 296 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 133/236 (56%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 1 MTIAFDTFLKESKTFVEEKL------VSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I K K G L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 175 LEYIHKHKAGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230 >gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1] gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1] Length = 297 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 124/234 (52%), Gaps = 11/234 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + ++ ++++ L+ + A L A+RY +L GGK++R LV Sbjct: 4 DEFDTWSRDRLEQVEAALERWVPALA-------PAGLGDAMRYGVLDGGKRLRPLLVLSA 56 Query: 62 ASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + ALR ++E IH YSLIHDD+P MD+ +RRGKPTVH+++ + A++AG Sbjct: 57 AEAVGATDSEAALRAACSVELIHAYSLIHDDMPCMDDDVLRRGKPTVHVKFGQAQAMLAG 116 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178 + + AFE+++ + ++++L L G GM GGQ +D+ +DE + Sbjct: 117 DAMQALAFEVLTPEDDSVPLALQARLCGLLARAAGQDGMAGGQAIDLASIGRPLDEQSLS 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + KTGAL+ + GA AS ++ L +G LG+ FQ+ DD+LD + Sbjct: 177 DMHRRKTGALLQASVMMGAACGDASPQARQALSEYGAALGLAFQVVDDILDVTQ 230 >gi|17986554|ref|NP_539188.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] gi|62290646|ref|YP_222439.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941] gi|82700560|ref|YP_415134.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225628336|ref|ZP_03786370.1| geranyltranstransferase [Brucella ceti str. Cudo] gi|225853224|ref|YP_002733457.1| polyprenyl synthetase [Brucella melitensis ATCC 23457] gi|237816147|ref|ZP_04595142.1| geranyltranstransferase [Brucella abortus str. 2308 A] gi|254689934|ref|ZP_05153188.1| geranyltranstransferase [Brucella abortus bv. 6 str. 870] gi|254694426|ref|ZP_05156254.1| geranyltranstransferase [Brucella abortus bv. 3 str. Tulya] gi|254698085|ref|ZP_05159913.1| geranyltranstransferase [Brucella abortus bv. 2 str. 86/8/59] gi|254708366|ref|ZP_05170194.1| geranyltranstransferase [Brucella pinnipedialis M163/99/10] gi|254708781|ref|ZP_05170592.1| geranyltranstransferase [Brucella pinnipedialis B2/94] gi|254714624|ref|ZP_05176435.1| geranyltranstransferase [Brucella ceti M644/93/1] gi|254717522|ref|ZP_05179333.1| geranyltranstransferase [Brucella ceti M13/05/1] gi|254730969|ref|ZP_05189547.1| geranyltranstransferase [Brucella abortus bv. 4 str. 292] gi|256030307|ref|ZP_05443921.1| geranyltranstransferase [Brucella pinnipedialis M292/94/1] gi|256045376|ref|ZP_05448270.1| geranyltranstransferase [Brucella melitensis bv. 1 str. Rev.1] gi|256061806|ref|ZP_05451941.1| geranyltranstransferase [Brucella neotomae 5K33] gi|256160480|ref|ZP_05458169.1| geranyltranstransferase [Brucella ceti M490/95/1] gi|256255686|ref|ZP_05461222.1| geranyltranstransferase [Brucella ceti B1/94] gi|256258189|ref|ZP_05463725.1| geranyltranstransferase [Brucella abortus bv. 9 str. C68] gi|256263286|ref|ZP_05465818.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|256370183|ref|YP_003107694.1| geranyltranstransferase [Brucella microti CCM 4915] gi|260167981|ref|ZP_05754792.1| geranyltranstransferase [Brucella sp. F5/99] gi|260547118|ref|ZP_05822856.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260565731|ref|ZP_05836214.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260755469|ref|ZP_05867817.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260758692|ref|ZP_05871040.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260762526|ref|ZP_05874863.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260884489|ref|ZP_05896103.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|261214740|ref|ZP_05929021.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|261219357|ref|ZP_05933638.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261222894|ref|ZP_05937175.1| polyprenyl synthetase [Brucella ceti B1/94] gi|261315865|ref|ZP_05955062.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261316274|ref|ZP_05955471.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261322419|ref|ZP_05961616.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261325809|ref|ZP_05965006.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261757424|ref|ZP_06001133.1| polyprenyl synthetase [Brucella sp. F5/99] gi|265987340|ref|ZP_06099897.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|265991805|ref|ZP_06104362.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265998853|ref|ZP_06111410.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|294851019|ref|ZP_06791695.1| geranyltranstransferase [Brucella sp. NVSL 07-0026] gi|297249039|ref|ZP_06932747.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196] gi|17982161|gb|AAL51452.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] gi|62196778|gb|AAX75078.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941] gi|82616661|emb|CAJ11743.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225616182|gb|EEH13230.1| geranyltranstransferase [Brucella ceti str. Cudo] gi|225641589|gb|ACO01503.1| Polyprenyl synthetase [Brucella melitensis ATCC 23457] gi|237788609|gb|EEP62822.1| geranyltranstransferase [Brucella abortus str. 2308 A] gi|256000346|gb|ACU48745.1| geranyltranstransferase [Brucella microti CCM 4915] gi|260095483|gb|EEW79361.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260151104|gb|EEW86199.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260669010|gb|EEX55950.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260672952|gb|EEX59773.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260675577|gb|EEX62398.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260874017|gb|EEX81086.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|260916347|gb|EEX83208.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|260921478|gb|EEX88131.1| polyprenyl synthetase [Brucella ceti B1/94] gi|260924446|gb|EEX91014.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261295109|gb|EEX98605.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261295497|gb|EEX98993.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261301789|gb|EEY05286.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261304891|gb|EEY08388.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261737408|gb|EEY25404.1| polyprenyl synthetase [Brucella sp. F5/99] gi|262553542|gb|EEZ09311.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|263002761|gb|EEZ15164.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263093252|gb|EEZ17349.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|264659537|gb|EEZ29798.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|294821662|gb|EFG38658.1| geranyltranstransferase [Brucella sp. NVSL 07-0026] gi|297174172|gb|EFH33529.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196] gi|326409783|gb|ADZ66848.1| polyprenyl synthetase [Brucella melitensis M28] gi|326539499|gb|ADZ87714.1| polyprenyl synthetase [Brucella melitensis M5-90] Length = 304 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 113/235 (48%), Positives = 153/235 (65%), Gaps = 3/235 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 + L + ++ L LL + + RL++A+R+ L GGK++R FLV E A Sbjct: 7 DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ Sbjct: 67 ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180 LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + + Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q MKTGAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241 >gi|315022294|gb|EFT35322.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM] Length = 323 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 16/224 (7%) Query: 22 DLLLQT-ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 DL+ + H L + Y + GGK++R +V LF + A++ AI Sbjct: 9 DLVAEAIEKHQFKNEPKELYEPMNYIISHGGKRLRPIMVLMGCELFGGSLEKAMKPALAI 68 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E H ++LIHDD+ MD +RR KPT+H + I++G+ LL A++ L+ Sbjct: 69 EFFHNFTLIHDDI--MDGAPLRRNKPTIHTLHGINVGILSGDALLIKAYQFF----EDLE 122 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESG 196 + + + + + + GQ +D+ E + + KTG L + + G Sbjct: 123 PELFKKCITLFSETGAV--LCEGQQMDVNFETNSNVTYEDYIKMITYKTGVLSAASFKIG 180 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 A++A A++ E E L FG+++GI FQ+ DD LD + KK Sbjct: 181 AMIAGATEQEAEALYQFGKHIGIAFQIMDDYLDVFGNQEQFGKK 224 >gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273] gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272] gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272] gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273] Length = 297 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 81/233 (34%), Positives = 132/233 (56%), Gaps = 10/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 5 AFDAFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLFATL 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G Sbjct: 59 QAFGKEKNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAF++I + + ++ + +L+L L G +GM+ GQ+ D++ E + ++ Sbjct: 119 LLTYAFQVIMTYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 179 IHKHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEG 231 >gi|148976608|ref|ZP_01813295.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium SWAT-3] gi|145963959|gb|EDK29217.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium SWAT-3] Length = 294 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 123/240 (51%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S N+++++ LD L N L++A+RY LLGGK+ R FLV Sbjct: 1 MIETLLSYQARNNEQLNLWLDRL---------PHQNQNLINAMRYGLLLGGKRARPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +A+ECIH YSLIHDDLP+MD+ +RRG T HI++DE TAI+ Sbjct: 52 ITGEMLGCTAEELDTPASAVECIHAYSLIHDDLPAMDDDELRRGHQTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ R +++ L G QGM GQ LDI+ E + + Sbjct: 112 GDALQTLAFTILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRAVTLKE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + + KTGALM A GA+ A +L + + +G+ FQ+ DD+LD D Sbjct: 172 LEEVHRNKTGALMKSAIRLGALAAGEKAFEVLPQLDKYADAIGLAFQVQDDILDIIGDTE 231 >gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553] gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553] Length = 303 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 16/240 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 LQ + ++ +LDDL+ RL A+RYA+LGG K++R+ +V Sbjct: 8 FAEWLQGRVRHVEDVLDDLMPPAE-----VLPVRLHEAMRYAVLGGGKRVRAAMVYAAGQ 62 Query: 64 LFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V+ + R AA+E IH YSL+HDDLP MDN +RRG+PT H+Q+DE TA+ Sbjct: 63 ACPVSGSVLAIEASLDRAAAAVELIHAYSLVHDDLPCMDNDTLRRGRPTTHVQFDEATAM 122 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175 +AG+ L AF++++S + + Q SL G QGM GGQ +D + Sbjct: 123 LAGDALQPLAFDLLAS--MPIAPALIVQATQSLARAAGSQGMAGGQAIDLLSVGHSLSRD 180 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++ + MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 181 ELQTMHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAMGLAFQVVDDILDVTADTA 240 >gi|330834019|ref|YP_004408747.1| geranyltranstransferase [Metallosphaera cuprina Ar-4] gi|329566158|gb|AEB94263.1| geranyltranstransferase [Metallosphaera cuprina Ar-4] Length = 327 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 115/236 (48%), Gaps = 16/236 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L L E +++ +D + L A RY L GGK++R +V + Sbjct: 2 ELEKYLGEVITQVNETIDKYIQGDV--------PELYEASRYLLKAGGKRLRPLMVVLSS 53 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + A+ GAAIE +H ++LIHDD+ MD RRG PTVH+++ TAI+AG+ Sbjct: 54 ELLGGSRDRAILAGAAIEVLHNFTLIHDDI--MDQDTTRRGLPTVHVKWGIPTAILAGDL 111 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179 L AFE+I+ L ++ + + + +I + + GQ +D++ E + E Sbjct: 112 LHAKAFELITESIKGLPIDLAYRALNCFSRSIVI--VSEGQAMDMEFERRWDVTENLYLE 169 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + KT L + G ++A+ + E L FGE +GI FQ+ DD+L D Sbjct: 170 MIRKKTAQLFACSAHLGGLLANGTNEEVNSLYDFGEKIGIAFQIMDDILGITADEK 225 >gi|330830903|ref|YP_004393855.1| Geranyltranstransferase [Aeromonas veronii B565] gi|328806039|gb|AEB51238.1| Geranyltranstransferase [Aeromonas veronii B565] Length = 296 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 84/223 (37%), Positives = 117/223 (52%), Gaps = 6/223 (2%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVG 76 +DD L + RL A+ Y LLGGK++R FLV + V Sbjct: 12 QRIDDCLSAQLESLPA-MAPRLRDAMSYGLLLGGKRVRPFLVYAVGEMLGVKSELLDGPA 70 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+ECIH YSL+HDDLP+MDN +RRG+PTVH +DE TAI+AG+ L T AF I++ Sbjct: 71 AAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPM 130 Query: 137 QLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFAC 193 R +++ +L G GM GGQ LD+Q E I ++ + + KTGAL+ A Sbjct: 131 PDSLMANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLAELEQVHRHKTGALIECAV 190 Query: 194 ESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 GA+ A L+ + +G+ FQ+ DD+LD D Sbjct: 191 ALGALCKADVDDATLAALQTYAAAIGLAFQVQDDILDITGDTA 233 >gi|331000960|ref|ZP_08324597.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859] gi|329569919|gb|EGG51676.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859] Length = 300 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 127/241 (52%), Gaps = 13/241 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 M ++ +R++ ++ L Q A +L SA+RY+++GG K++R LV Sbjct: 1 MTVAFKDWVKACQQRVEKAAENNLPQEALI-----PQKLHSAMRYSVIGGGKRVRPLLVY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +++ + A+EC+H YSLIHDDLP MDN +R GKPT H + E A++A Sbjct: 56 AVGQIYDADPENLDLTALAVECVHSYSLIHDDLPCMDNDILRHGKPTTHAAFGEAVAMLA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQ 176 G+ L AF + +T+L R +L+ L + +GM GGQ +D+ ++ + + Sbjct: 116 GDALQPEAFLFLV--RTKLPAEQRIKLVELLAYASSTRGMCGGQAIDLSVVGNQKMTIEE 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + ++ MKTGAL+ + GA SQ++ +L +G +G+ FQ+ DD+LD D Sbjct: 174 LRLMHSMKTGALLKASVLLGAFAGKKTPSQHDLSQLEVYGNAIGLAFQIVDDILDVVGDT 233 Query: 235 P 235 Sbjct: 234 A 234 >gi|325958579|ref|YP_004290045.1| dimethylallyltranstransferase [Methanobacterium sp. AL-21] gi|325330011|gb|ADZ09073.1| Dimethylallyltranstransferase [Methanobacterium sp. AL-21] Length = 328 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 15/234 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 L++ S ID + + L + L+ A GGKKIR +V A Sbjct: 7 LKKYSSDIDEEIQNSLSTVDPEELKKSTQHLIKA------GGKKIRPSMVVLSAIAVGGA 60 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AL+ AA+E IH +SLIHDD+ MD +RRG+P+VH+ + E AI+AG+ L + AF Sbjct: 61 PEEALKTAAAVELIHTFSLIHDDI--MDEDDMRRGEPSVHVLWGEPMAILAGDTLFSKAF 118 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKT 185 E + R L + ++ + GQ D+ E + E + KT Sbjct: 119 ETVLETPIDNVSYERVVGALKTVVDSCIK-ICEGQASDMCFEGNFEVSEEAYMNMIYKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 GAL+ + +SGAI+ + + E L +G +G+ FQ+ DD LD E+DL K Sbjct: 178 GALIAASTKSGAIIGGGTPEQVELLSEYGRLVGLAFQIQDDYLDVMSDEQDLGK 231 >gi|331091277|ref|ZP_08340118.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404724|gb|EGG84263.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium 2_1_46FAA] Length = 296 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 82/228 (35%), Positives = 125/228 (54%), Gaps = 10/228 (4%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 + I+ IL L ++ H ++++ A+ Y L+ GGK+IR L+ E +F Sbjct: 8 EAKVTEIENILRKYLPDSSGH-----QEKIMEAMEYNLMAGGKRIRPMLMKETYEMFGGT 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AAIE IH YSLIHDDLP+MDN RRG+ T HI Y E I+AG+ LL YAF Sbjct: 63 GKIIEPFMAAIEMIHTYSLIHDDLPAMDNDDYRRGRKTTHIVYGEAMGILAGDALLNYAF 122 Query: 129 EIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184 E S +DN + + + L G+ GM+GGQ++D+ + +D+ + I +K Sbjct: 123 ETASEAFDMDRDNGYLIGKALQILGRKAGIYGMIGGQVVDVAASGKAVDKDVLDFIYDLK 182 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 TGAL+ + GAI+A A++ E + + + +G+ FQ+ DD+LD Sbjct: 183 TGALIEASMMIGAILAGATEQEVKIIESAAKKVGLAFQIQDDILDVTS 230 >gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4] gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196] gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621] gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4] gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621] gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196] Length = 297 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 80/233 (34%), Positives = 131/233 (56%), Gaps = 10/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 5 AFDAFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLFATL 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G Sbjct: 59 QAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118 Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAF+ I++ + ++ + +L+L L G +GM+ GQ+ D++ E + ++ Sbjct: 119 LLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 179 IHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEG 231 >gi|148560740|ref|YP_001259620.1| geranyltranstransferase [Brucella ovis ATCC 25840] gi|148371997|gb|ABQ61976.1| geranyltranstransferase [Brucella ovis ATCC 25840] Length = 304 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 113/235 (48%), Positives = 153/235 (65%), Gaps = 3/235 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 + L + ++ L LL + + RL++A+R+ L GGK++R FLV E A Sbjct: 7 DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ Sbjct: 67 ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180 LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + + Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q MKTGAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241 >gi|261379616|ref|ZP_05984189.1| geranyltranstransferase [Neisseria subflava NJ9703] gi|284798098|gb|EFC53445.1| geranyltranstransferase [Neisseria subflava NJ9703] Length = 298 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 12/241 (4%) Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57 MN L + Q+ + + +L L ++Q L A+RY L GGK++R L Sbjct: 1 MNPANELKTWQQKAQAQTELLLAHFLPS-----ESQVPHTLHEAMRYVTLGGGKRLRPLL 55 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V + L N + AAIE +H YSL+HDD+P+MDN +RRGKPT H+QYDE TA+ Sbjct: 56 VLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATAL 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175 + G+ L T AF+++S P T L + ++ +L G GM GGQ +D+ + + +++ Sbjct: 116 LVGDALQTQAFDVLSRP-TGLPAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQA 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 ++ + +KTGAL+ A GA+ + + + L + LG+ FQ+ DD+LDCE D Sbjct: 175 ELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQTLDRYAAKLGLAFQVIDDVLDCEADT 234 Query: 235 P 235 Sbjct: 235 A 235 >gi|225570636|ref|ZP_03779659.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM 15053] gi|225160554|gb|EEG73173.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM 15053] Length = 300 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 82/227 (36%), Positives = 124/227 (54%), Gaps = 10/227 (4%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69 + I+T+L D L + Q + ++ A+ Y+LL GGK++R L+ E LFN Sbjct: 13 RKVQEIETVLQDYLPR-----QKGYQSIIMEAMSYSLLAGGKRLRPMLMKETYDLFNGRS 67 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I+AG+ LL YAFE Sbjct: 68 KALKPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRRTTHVVYGEDMGILAGDALLNYAFE 127 Query: 130 IISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKT 185 ++ + + + L G+ GM+GGQ++D+++ D + + I ++KT Sbjct: 128 TAFKAFVTEPEDSLLIGRALGVLGEKAGIYGMIGGQVIDVRETGRDISKEVLDTIYELKT 187 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 AL+ A GAI+ AS+ E + + N+GI FQ+ DD+LD Sbjct: 188 AALIESAMMIGAILGGASEEEVKAVEQIAGNVGIAFQIQDDILDVVS 234 >gi|319638772|ref|ZP_07993531.1| geranyltranstransferase [Neisseria mucosa C102] gi|317400013|gb|EFV80675.1| geranyltranstransferase [Neisseria mucosa C102] Length = 298 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 12/241 (4%) Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57 MN L + Q+ + + +L L ++Q L A+RY L GGK++R L Sbjct: 1 MNPANELKTWQQKAQAQTELLLAHFLP-----YESQVPHTLHEAMRYVTLGGGKRLRPLL 55 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V + L N + AAIE +H YSL+HDD+P+MDN +RRGKPT H+QYDE TA+ Sbjct: 56 VLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATAL 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175 + G+ L T AF+++S P T L + ++ +L G GM GGQ +D+ + + +++ Sbjct: 116 LVGDALQTQAFDVLSRP-TGLPAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQA 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 ++ + +KTGAL+ A GA+ + + + L + LG+ FQ+ DD+LDCE D Sbjct: 175 ELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQTLDRYAAKLGLAFQVIDDVLDCEADT 234 Query: 235 P 235 Sbjct: 235 A 235 >gi|299132868|ref|ZP_07026063.1| Polyprenyl synthetase [Afipia sp. 1NLS2] gi|298593005|gb|EFI53205.1| Polyprenyl synthetase [Afipia sp. 1NLS2] Length = 312 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 99/237 (41%), Positives = 141/237 (59%), Gaps = 5/237 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 L + + +LD LL + + RL+ A+RY+ L GGK++R FL A Sbjct: 13 DFNKLLDATAADTEALLDRLLSERPEQGEILRPKRLIEAMRYSSLNGGKRLRPFLAVASA 72 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F+V AL GAA+ECIHCYSLIHDDLPSMDN +RRG+PT H ++D+ TAI+AG+ Sbjct: 73 AMFDVPRQGALLAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTSHKKFDDATAILAGDS 132 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVF 178 LLT AF+II+ + +R L +L G+ GM GGQ++D+ E + V Sbjct: 133 LLTLAFDIITRDEVHRDPTVRLLLTRALARAAGIGGMAGGQIMDLAGEGRFGDKEPPDVA 192 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q+MKTGAL+ + C +GA++ AS+ + L +G G FQ+ADDLLD E D Sbjct: 193 KLQQMKTGALLKYGCIAGALLGQASKEQYAALDAYGHAFGEAFQIADDLLDVEGDAA 249 >gi|56964228|ref|YP_175959.1| geranyltranstransferase [Bacillus clausii KSM-K16] gi|56910471|dbj|BAD64998.1| geranyltranstransferase [Bacillus clausii KSM-K16] Length = 295 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 84/236 (35%), Positives = 136/236 (57%), Gaps = 9/236 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M+ + L+E + +D L + + + + RL A+ Y+L GGK++R L+ Sbjct: 1 MSALFQTFLEEARQLVDKKLPEYVRELEAE------HRLKEAMLYSLEAGGKRVRPVLLL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +N L L AIE +H YSL+HDDLP+MD+ +RRG+PT H + E TAI+A Sbjct: 55 AVLEAYNQPILHGLDTACAIEMVHTYSLVHDDLPAMDDDDLRRGQPTNHKVFGEATAILA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLT +F +I++ L + ++ +L+ G GM+GGQ+ D+ E + Q+ Sbjct: 115 GDALLTQSFALIANADAPLSAKTKVSIIAALSKAAGASGMVGGQLADMFAEGKQLTVEQL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + K KTG L+ F+ E+GA++A S E+ +L FG+ +G++FQ+ DD+LD E D Sbjct: 175 ANVHKRKTGELLAFSIEAGALIAGVSNEERSKLNEFGQEIGLLFQIKDDILDVEGD 230 >gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048] gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048] Length = 297 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 80/233 (34%), Positives = 131/233 (56%), Gaps = 10/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L+E+ ++ L + Q + L A+ Y+L GGK++R L+ Sbjct: 5 AFDAFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLFATL 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G Sbjct: 59 QAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118 Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAF+ I++ + ++ + +L+L L G +GM+ GQ+ D++ E + ++ Sbjct: 119 LLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 179 IHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEG 231 >gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens] Length = 352 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 73/237 (30%), Positives = 125/237 (52%), Gaps = 11/237 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + L + + ++ LD+ L T T ++ ++RY+LL GGK++R + Sbjct: 55 DFDLKAYFAQKVAAVEKALDESLTCT-----TPETKIIVESMRYSLLAGGKRVRPVMCIA 109 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F A+ AIE IH SLIHDDLP+MDN +RRG PT H+ Y + AI+AG Sbjct: 110 ACEMFGGTEAMAMPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGMPTNHVIYGDDVAILAG 169 Query: 121 NGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDET 175 + LL+ +FE + S + + + L +G G+ GGQ++D++ E + Sbjct: 170 DALLSTSFEHCAVGSTAEGIPAERIVETIRRLGEAVGAVGLAGGQVMDLECEAKSGVSLE 229 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ I KT L+ + +GA++A A++++ + + ++GI FQ+ADD+LD Sbjct: 230 ELTWIHTHKTAKLLEVSVAAGAVLAGAAKDDVRQCETYANDIGIAFQVADDILDVTA 286 >gi|320540321|ref|ZP_08039973.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson] gi|320029641|gb|EFW11668.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson] Length = 306 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 127/240 (52%), Gaps = 10/240 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 + +L +R D L D + ++ L++++R+ ALLGGK++R FLV Sbjct: 7 SAAFADQLLAFRQRTDRTLLDFIAPL-----PFNDGDLVASMRHGALLGGKRLRPFLVYT 61 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F + AA+ECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG Sbjct: 62 TGQMFGIAQNNLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAG 121 Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 + L + AF I++ + + R ++ L G+ GM GGQ +D+ E I + Sbjct: 122 DALQSLAFSILADAEMPDVALRDRLAMVSELAAASGVAGMCGGQSMDLDAEGKQIGLAAL 181 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTGAL+ A GA+ A +S L + +G+ FQ+ DD+LD + K Sbjct: 182 EQIHRHKTGALIRAAIRLGALAAGSSGRAALPLLDRYAAAIGLAFQVQDDILDVIGETEK 241 >gi|327392961|dbj|BAK10383.1| geranyltranstransferase IspA [Pantoea ananatis AJ13355] Length = 299 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P L ++++ L LL + L++A++Y ALLGGK++R FLV Sbjct: 2 DFPELLDAYHRQVNRALTGLLDAL-----PFQSSPLVNAMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI+Y E TAI+AG+ Sbjct: 57 EMLHADKASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P + R ++ L G+ GM GGQ LD+ E + Q+ Sbjct: 117 LQTLAFSILADQPMPGVSAEYRLAMLSELAKASGVAGMCGGQALDLAAEGQSVGLAQLEQ 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA A + L + + +G+ FQ+ DD+LD D + Sbjct: 177 IHRHKTGALIRAAVRLGAFAAGEKGREALPYLDRYADAIGLAFQVQDDILDVTGDTAVIG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|291616530|ref|YP_003519272.1| IspA [Pantoea ananatis LMG 20103] gi|291151560|gb|ADD76144.1| IspA [Pantoea ananatis LMG 20103] Length = 299 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P L ++++ L LL + L++A++Y ALLGGK++R FLV Sbjct: 2 DFPELLDAYHRQVNRALTGLLDAL-----PFQSSPLVNAMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI+Y E TAI+AG+ Sbjct: 57 EMLHADKASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P + R ++ L G+ GM GGQ LD+ E + Q+ Sbjct: 117 LQTLAFSILADQPMPGVSAEYRLAMLSELAKASGVAGMCGGQALDLAAEGQSVGLAQLEQ 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA A + L + + +G+ FQ+ DD+LD D + Sbjct: 177 IHRHKTGALIRAAVRLGAFAAGEKGREALPYLDRYADAIGLAFQVQDDILDVTGDTAVIG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10] gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10] Length = 307 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 80/234 (34%), Positives = 125/234 (53%), Gaps = 10/234 (4%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 + E R+D+ +L + + L ++ Y+L+ GGK++R LV Sbjct: 16 YMNEICDRLDSEFTNLFPS-----GWKVPETLSRSMSYSLMAGGKRMRPLLVIAACEAGG 70 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A+ V A+E +H YSLIHDDLP+MD+ RRGKPT H + E +AI+AG+ LLT+ Sbjct: 71 GSREAAVPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTH 130 Query: 127 AFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182 AF I ++ K + ++ L G +GM+GGQ+ D++ E Q+ I Sbjct: 131 AFYSVIQAARKHGVPAERVLSIVEDLAVYAGPRGMVGGQVADMEGEQGITTLEQLEYIHL 190 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT L+ F+ +G +A S ++ E LR FG ++G+ FQ+ DD+LD D K Sbjct: 191 HKTSDLIMFSLMAGGHVAGCSDSQIESLRTFGHHIGLAFQIQDDILDLVGDESK 244 >gi|85711191|ref|ZP_01042251.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] gi|85695104|gb|EAQ33042.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] Length = 295 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 86/237 (36%), Positives = 125/237 (52%), Gaps = 13/237 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 MN + E +D L+ L+ SH+ + L A+ Y LLGGK+IR +L Sbjct: 1 MN--IKQFTAEVRSAVDNRLNQLI---ESHIASSS---LKEAMAYGVLLGGKRIRPYLTM 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A L AL A+E IH YSLIHDDLP+MD+ +RRG PT HI++ E TA++A Sbjct: 53 AVAELCGAETNDALDAACAVELIHAYSLIHDDLPAMDDDELRRGHPTCHIKFGEATAVLA 112 Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176 G+ L T AFE++S+ +T+L R ++ L G +GM GQ LD IDE + Sbjct: 113 GDALQTLAFEVLSTNLETKLSSQRRIAMIQHLASASGAKGMCFGQALDLDATGRAIDELE 172 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I + KTGAL+ + G + + SQ + F +G+ +Q+ DD+LD Sbjct: 173 LEKIHRHKTGALIRASAALGVLAGNDESQQYLDHFCDFASWIGLAYQVYDDILDVVG 229 >gi|298370440|ref|ZP_06981756.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314] gi|298281900|gb|EFI23389.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314] Length = 298 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 84/241 (34%), Positives = 132/241 (54%), Gaps = 12/241 (4%) Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57 MN L Q+ + + +L+ L + Q L A+RY L GGK++R L Sbjct: 1 MNPANELKVWQQKAQAQTELLLERFLPS-----ENQVPHTLHEAMRYVTLGGGKRLRPLL 55 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V + L + + + AAIE +H YSL+HDD+P+MDN +RRGKPT H++YDE TA+ Sbjct: 56 VLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATAL 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175 + G+ L T AF+++S P T L + ++ +L G GM GGQ +D+ + + +++ Sbjct: 116 LVGDALQTQAFDVLSRP-TGLPAERQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQA 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 Q+ + +KTGAL+ A GA+ ++ L + LG+ FQ+ DD+LDCE D Sbjct: 175 QLEQMHSLKTGALIRAAAVLGALACPDLDSDDVRTLDNYAAKLGLAFQVIDDVLDCEADT 234 Query: 235 P 235 Sbjct: 235 A 235 >gi|210615786|ref|ZP_03290767.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787] gi|210150122|gb|EEA81131.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787] Length = 296 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 120/222 (54%), Gaps = 10/222 (4%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 I+ IL L ++ ++ A+ Y+LL GGK++R L+ E LF + Sbjct: 14 IEQILKKYLP-----VKEGLQKEIMEAMEYSLLAGGKRLRPMLMRETYVLFGGDEELIEP 68 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I+AG+ LL +AFE Sbjct: 69 FMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEAMGILAGDALLNFAFETAVKA 128 Query: 135 KTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190 Q M L+ G+ GM+GGQ++D++ + + + + I ++KT AL+ Sbjct: 129 FAMCPQKSIEIGQAMRILSEKAGIYGMIGGQVVDVKSAGQAVSKEVLDFIYELKTSALIE 188 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A GA++A AS+ E +++ + +G+ FQ+ DD+LD Sbjct: 189 CAMMIGAVLAGASETEVQKIEQIAKYVGVAFQIQDDILDVTS 230 >gi|194366666|ref|YP_002029276.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3] gi|194349470|gb|ACF52593.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3] Length = 292 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 84/230 (36%), Positives = 122/230 (53%), Gaps = 10/230 (4%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64 + RI++ LD L A + RL A+RY++LGG K++R LV L Sbjct: 4 EALFARWRDRIESQLDAALPSPA-----EAPQRLHQAMRYSVLGGGKRMRPLLVYASGQL 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F + A+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+AG+ L Sbjct: 59 FGAQPESLDAAAMAVELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQ 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQK 182 T AF +++ L +R + +L H G GM GGQ +D + + + Sbjct: 119 TRAFGLLADA--PLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHA 176 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTGAL+ A GA+ A + + +L F + LG+ FQ+ DD+LD E Sbjct: 177 LKTGALIRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEA 226 >gi|326800486|ref|YP_004318305.1| geranyltranstransferase [Sphingobacterium sp. 21] gi|326551250|gb|ADZ79635.1| Geranyltranstransferase [Sphingobacterium sp. 21] Length = 324 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 15/227 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 + TI+ + L + + + L I+Y L GGK++R L A LF Sbjct: 5 AALQTIIGEALTERNF---PDNPNTLYEPIKYFLAIGGKRLRPVLTLLAAELFGATIKEG 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L AIE H ++L+HDD+ MD +RRG+ T+H ++D TAI++G+ L A+++++ Sbjct: 62 LPAALAIEMFHNFTLMHDDI--MDEAPLRRGRETIHKKWDINTAILSGDATLIRAYQLLA 119 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALM 189 K +L + N Q + GQ LD+ E + E + + ++KT L+ Sbjct: 120 ECKPELLAELL------KVFNKMAQEVCEGQQLDMDFEKLATVTEEEYLHMIRLKTSVLL 173 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A E GAI+ A + ++ L FG N+GI FQL DD+LD D K Sbjct: 174 GAALEIGAILGGADKQDRSNLYTFGVNIGIAFQLQDDILDVYGDPSK 220 >gi|237756447|ref|ZP_04584985.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691395|gb|EEP60465.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5] Length = 287 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 92/236 (38%), Positives = 134/236 (56%), Gaps = 14/236 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L+E + I+ LD + + L +A+RY+L GGK+IR LV E A Sbjct: 2 EFKDILKEKASFINKQLDRFVPNCI-------PEELSNAMRYSLEAGGKRIRPILVIESA 54 Query: 63 SLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +VN + + + E IH YSLIHDDLP+MD+ +RRGKPT H + E AI+AG Sbjct: 55 KAVKEDVNVEDFIDIAISTEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAG 114 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 +GLLTYAFE+IS+ +L +++ L+HN+G+ GM+GGQ DI F D V I Sbjct: 115 DGLLTYAFEVISN-NKKLSAEKIVKVINILSHNVGIYGMVGGQAADILPNFKD---VEFI 170 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT + C+ G ++A A++ E +L+ +G N+G+ FQ+ DD+LD D K Sbjct: 171 HLNKTAKFLSACCQIGGVLADATEEEILKLKNYGINIGLAFQIWDDILDEIGDEEK 226 >gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5] gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5] Length = 304 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 80/234 (34%), Positives = 124/234 (52%), Gaps = 10/234 (4%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 + E R+D+ +L + + L ++ Y+L+ GGK++R LV Sbjct: 13 YMNEICDRLDSEFTNLFPS-----GWKVPETLSRSMSYSLMAGGKRMRPLLVIAACEAGG 67 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A+ V A+E +H YSLIHDDLP+MD+ RRGKPT H + E +AI+AG+ LLT+ Sbjct: 68 GSREAAVPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTH 127 Query: 127 AFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182 AF I ++ K + ++ L G +GM+GGQ+ D++ E Q+ I Sbjct: 128 AFYSVIQAARKHGVPAERVLSIVEDLAEYAGPRGMVGGQVADMEGEQGITTLEQLEYIHL 187 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT L+ F+ +G +A S + E LR FG ++G+ FQ+ DD+LD D K Sbjct: 188 HKTSDLIMFSLMAGGHVAGCSDAQIESLRTFGHHIGLAFQIQDDILDLVGDESK 241 >gi|238917015|ref|YP_002930532.1| geranyltranstransferase [Eubacterium eligens ATCC 27750] gi|238872375|gb|ACR72085.1| geranyltranstransferase [Eubacterium eligens ATCC 27750] Length = 297 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 78/243 (32%), Positives = 131/243 (53%), Gaps = 14/243 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 ++L++ I+ I+ L + +T + ++ ++ Y++ GGK++R L+ E Sbjct: 2 SDFKNELEQEVVFINDIILRYLPE-----ETGLDKKIRESMNYSVNAGGKRVRPMLMLEV 56 Query: 62 ASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L N AA+ECIH YSL+HDDLP+MDN RRG+ T H + E I+AG Sbjct: 57 YKLCGGNDCQVVYPFMAALECIHSYSLVHDDLPAMDNDDYRRGRLTTHKVFGEDFGILAG 116 Query: 121 NGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 +GLL A+EI++ + +I +++ M + G++GM+GGQ +D++ + E Q Sbjct: 117 DGLLNLAYEIMAEALVSGEGDIETKAKAMEVIARKAGIKGMVGGQAVDVELTGRTLSEEQ 176 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I ++KTGAL+ A +GA +A ++L +G FQ+ DD+LD E+ Sbjct: 177 LDFIFRLKTGALIEAAFLAGAYLAGCDDETADKLCRAASLIGFAFQIRDDILDVTSSLEE 236 Query: 234 LPK 236 L K Sbjct: 237 LGK 239 >gi|114563954|ref|YP_751468.1| polyprenyl synthetase [Shewanella frigidimarina NCIMB 400] gi|114335247|gb|ABI72629.1| farnesyl-diphosphate synthase [Shewanella frigidimarina NCIMB 400] Length = 293 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 94/238 (39%), Positives = 130/238 (54%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L + R++ IL+ L + L +A+ + ALLGGK+IR FLV Sbjct: 2 LAEAITTYQNRVNGILNQHLT-----LLDDAAPDLKAAMLHGALLGGKRIRPFLVYSVGD 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + VN + AAIECIH YSLIHDDLP+MDN +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MLGVNINALDKAAAAIECIHAYSLIHDDLPAMDNDALRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 T AFEII++P L + ++ L G QGM GGQ +D+ D I+ ++ + Sbjct: 117 QTLAFEIITAPCNDLHPKQQLAMVRVLAKASGYQGMCGGQAIDLSATDHSINLDRLTELH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 KTGAL+ A E I A + + + LG+ FQ+ DD+LD E+L K Sbjct: 177 NKKTGALISCAVELALIAADVPDEHYKLMMKYAHTLGLAFQVQDDILDITASTEELGK 234 >gi|226323204|ref|ZP_03798722.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758] gi|225208394|gb|EEG90748.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758] Length = 300 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 129/240 (53%), Gaps = 13/240 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 +++E ++ I+ +L L + + +++ A+ Y+++ GGK++R L+ E Sbjct: 7 FKEEMKERTEVIEKLLVKYLPKAEG-----YQSQIMEAMEYSVMAGGKRLRPMLMQETYR 61 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF AA+E IH YSL+HDDLP+MDN RRG+ T HI Y E I+AG+ L Sbjct: 62 LFGGEGKEIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEAMGILAGDAL 121 Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L YAFE + + + + L G+ GM+GGQ++D+ +DE + Sbjct: 122 LNYAFETAVKAFEIAPEKSLLIGKALKILAEKAGIYGMIGGQVVDVASCGVGLDEGMLNF 181 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 I ++KTGAL+ + GA++A A E E+++ +GI FQ+ DD+LD E+L K Sbjct: 182 IYELKTGALIESSMMIGALLAGAEDAELEKVQKIASGVGIAFQIQDDILDVTSTTEELGK 241 >gi|266620367|ref|ZP_06113302.1| geranyltranstransferase [Clostridium hathewayi DSM 13479] gi|288868039|gb|EFD00338.1| geranyltranstransferase [Clostridium hathewayi DSM 13479] Length = 295 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 74/236 (31%), Positives = 123/236 (52%), Gaps = 11/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L+ ++ ++ +++ L + +T +L A+ Y++ GGK++R L+ Sbjct: 1 MN--FNEMLETRTREVEAVVERYLPAADGYQKT-----VLDAMNYSVRAGGKRLRPMLME 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E LF + AAIE IH SLIHDDLP MDN +RRG PT ++Y A++A Sbjct: 54 ETYRLFGGSGTVVEPFMAAIEMIHTSSLIHDDLPCMDNDELRRGLPTTWVKYGYDMAVLA 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 G+ LL YA E + +D + + L G+ GM+GGQ +D++ ++ + + Sbjct: 114 GDSLLIYAVETAAKAFALTEDAAVVGRCIGILAQKTGIYGMIGGQTVDVELTNKPVPHEK 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I +KTGAL+ + GA++A A + E + +G+ FQ+ DD+LD Sbjct: 174 LDFIYHLKTGALLESSMMIGALLAGADEEETRLVEQMAAAIGLAFQIQDDILDVTS 229 >gi|312112938|ref|YP_004010534.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311218067|gb|ADP69435.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 296 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 109/234 (46%), Positives = 147/234 (62%), Gaps = 6/234 (2%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 +L++++ R++ LD+ L ++ DRLL A+RY L GGK+ R FLV E A+ Sbjct: 3 FTERLEDHASRVERHLDEWL---STDKLGAVPDRLLDAMRYGTLGGGKRFRPFLVIESAA 59 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF V AL G+A+ECIHCYSL+HDDLP+MDN +RRG+PTVH +D+ TAI+AG+ L Sbjct: 60 LFGVPVEKALNAGSALECIHCYSLVHDDLPAMDNDDLRRGRPTVHKAFDDATAILAGDTL 119 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT AFEII+ T +R+ L L L G GM GGQMLD+ + E + +Q Sbjct: 120 LTVAFEIIAHESTHPNPAVRAALGLELARASGGAGMAGGQMLDLMAPGKMLGEADIRTLQ 179 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 MKTGAL+ + C +G I+ AS+ E L+ +G+ LG FQLADDLLD E D Sbjct: 180 AMKTGALITYGCVAGGILGEASKAELAALKTYGDALGAAFQLADDLLDAEGDAA 233 >gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 345 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 7/219 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75 T++ ++ + + Q +++ A+RY+ L G K+ + LF N L A Sbjct: 60 TLIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGGNRLAAFPT 119 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133 A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG+ L + I S Sbjct: 120 ACALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHT 179 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 P + + +++ + +G GM GQ LD++ + V Q+ K G + + Sbjct: 180 PTGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEG---GPSFVEFAQEKKYGEMSECSA 236 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G ++A A +E +RLR +G +G+++Q+ DD+L+ + Sbjct: 237 VCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDVLEAKA 275 >gi|224543278|ref|ZP_03683817.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM 15897] gi|224523811|gb|EEF92916.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM 15897] Length = 284 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 10/227 (4%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75 + I++++ + + + + A+ Y+++ GGK++R L + ++V++ L + Sbjct: 4 NNIIEEVNARLKEILSSYRPGLVKEAMTYSVMAGGKRLRPLLFIQTLRAYSVDYHKYLDI 63 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AIE IH YSLIHDDLP MDN +RRGKPT H Q+DE TAI+AG+ LL + +I + Sbjct: 64 ACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTCHKQFDEATAILAGDALLNESMNVI--IR 121 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFAC 193 L D ++ +++ L + GL GM+ GQ D+ E ++ I KTGAL+ Sbjct: 122 MDLDDALKVEVLRYLYNASGLGGMIYGQQQDMYFETHTATLDELQAIHHDKTGALISVPM 181 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 + ++A + + ++L G LG+ FQ+ DD+LD E L KK Sbjct: 182 KIAGLIAK--KEDADKLENIGFKLGLAFQIQDDILDVTSTTETLGKK 226 >gi|294501200|ref|YP_003564900.1| geranyltranstransferase [Bacillus megaterium QM B1551] gi|294351137|gb|ADE71466.1| geranyltranstransferase [Bacillus megaterium QM B1551] Length = 298 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 135/240 (56%), Gaps = 12/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L + R++T L +++ + + L ++ Y+L GGK++R L+ Sbjct: 5 MN--LKEYISFTKDRVETRLPEVVKALHAPVN------LKESMLYSLTAGGKRLRPVLLF 56 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + L A+E IH YSLIHDDLPSMD+ +RRGKPT H Y E TAI+A Sbjct: 57 ATLHAFGKDESMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILA 116 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ LLT +F++IS ++ +++ QL+ L G +GM+ GQ+ D++ E + + Sbjct: 117 GDALLTNSFQLISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDE 176 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I KTG L+ F ++GAI+A A+ ++E L F +++G+ FQ+ DD+LD E K Sbjct: 177 LEYIHLHKTGKLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEK 236 >gi|325569748|ref|ZP_08145772.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755] gi|325157053|gb|EGC69219.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755] Length = 298 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 15/241 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 L +E++ I+ +++ + + S + RL +++Y++ GGK+IR L+ Sbjct: 2 SALTEFTKEHAPLIEEVMERFVKEHTS------DQRLFKSMQYSIQAGGKRIRPLLLAAT 55 Query: 62 ASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + F+ TA+ + AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG Sbjct: 56 VAAFHKPVNTAVYQCAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAG 115 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 +GLLT AF++++ +++ N + L+ L+ G QGM+ GQ DIQ E + ++ Sbjct: 116 DGLLTAAFQLVAMA--EIEANQKVLLLQQLSKAAGTQGMVAGQAADIQGENQALSLEELM 173 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLP 235 I + KTG L+ FA +G ++A ++ L F +++G+ FQ+ DDLLD E+L Sbjct: 174 SIHERKTGELIRFAVIAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELG 233 Query: 236 K 236 K Sbjct: 234 K 234 >gi|225388185|ref|ZP_03757909.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme DSM 15981] gi|225045743|gb|EEG55989.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme DSM 15981] Length = 303 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 74/245 (30%), Positives = 130/245 (53%), Gaps = 16/245 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 ++++ +K I+ I++ L + +T H +L A+ Y++ GGK++R L+ E Sbjct: 5 EQFKAEMERRTKEIEQIIEPYLPE-----ETGHQKTVLEAMNYSMKAGGKRLRPMLMQEV 59 Query: 62 ASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 LF + L + AA+E IH SL+HDDLP MD+ +RRGKP+ +Y E ++ G Sbjct: 60 CRLFTGDVLDCVIPFMAAVEMIHTSSLVHDDLPCMDDDRLRRGKPSTWAEYGEDIGVLTG 119 Query: 121 NGLLTYAFEIISSPKTQLKD----NIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDE 174 + L+ YAFE + D + + + L H G GM+GGQ +D++ I Sbjct: 120 DALMMYAFETAARAFETSIDPDEISAIGRSIGILAHKTGAFGMIGGQTVDVELAGSDIPR 179 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232 ++ I ++KTGAL+ + GA++ A++ + + + ++G+ FQ+ DD+LD Sbjct: 180 DKLDFIYRLKTGALLEASMLIGAVLGGAAEEDCKIVERLASHIGMAFQIQDDILDVTGSE 239 Query: 233 -DLPK 236 +L K Sbjct: 240 AELGK 244 >gi|170730756|ref|YP_001776189.1| geranyltranstransferase [Xylella fastidiosa M12] gi|167965549|gb|ACA12559.1| geranyltranstransferase [Xylella fastidiosa M12] Length = 291 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 91/235 (38%), Positives = 130/235 (55%), Gaps = 13/235 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ L ++ +R D+ L+ L + TQ RL +A+RY +L GGK+IR LV Sbjct: 1 MSKALFTR---WCQRTDSYLERTL-----SIPTQAPQRLHAAMRYTVLSGGKRIRPLLVY 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF+V+ AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ Sbjct: 53 AAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILT 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177 G+ L T AFE ++ ++R + +LTH G+ GM GGQ LDI +T + Sbjct: 113 GDALQTLAFECLADA--PADASLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKAL 170 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + +K+G LM A GA+ S + L F LG+ FQ+ DD+LD E Sbjct: 171 EAMHALKSGTLMRAAVRMGALAGDPSPEDLHSLDTFAATLGLAFQVRDDILDIES 225 >gi|209694502|ref|YP_002262430.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238] gi|208008453|emb|CAQ78619.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238] Length = 298 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 89/244 (36%), Positives = 133/244 (54%), Gaps = 18/244 (7%) Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55 M L +L Q N + ++ + + +Q L A++YALL GGK+ R Sbjct: 1 MTDSLKQQLPIFQQRNIEHLNQWFEKIEIQQ---------QPLTDAMKYALLLGGKRARP 51 Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115 +LV A++ ++ A AA+ECIH YSLIHDDLP+MDN +RRG T HI++DE T Sbjct: 52 YLVYITANMLGIDSEHADAPAAAVECIHSYSLIHDDLPAMDNDDLRRGHATCHIKFDEAT 111 Query: 116 AIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172 AI+AG+ L T AFEI+++ + ++ R ++ L+ G GM GQ LD+Q E + Sbjct: 112 AILAGDALQTLAFEILANGTLAEEAESSRIDMIRVLSKASGASGMCMGQSLDLQAEGKQV 171 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCE 231 D + I KTGALM A + GA+ A + +L + + +G+ FQ+ DD+LD Sbjct: 172 DLLSLEQIHANKTGALMKSAIQLGALCAGEKGKQILPQLEKYADAIGLAFQVQDDILDIT 231 Query: 232 EDLP 235 D Sbjct: 232 SDTE 235 >gi|225428131|ref|XP_002281076.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|225467464|ref|XP_002264102.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 341 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 14/232 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58 M L S I+T L++ + ++ ++ A+RY++L GGK+ + Sbjct: 46 MQFDLRSYWTTLISEINTKLEEAI-------PVKYPQQIYEAMRYSVLAKGGKRAPPVMC 98 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 LF + L A A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+ Sbjct: 99 VAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAIL 158 Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176 AG+ L F I S P + + +++ + ++G GM GQ LD++ Sbjct: 159 AGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGA---PNS 215 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 V +Q+ K G + + G + A+ ++ RLR +G +G+++Q+ DD+L Sbjct: 216 VDFVQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVL 267 >gi|295706547|ref|YP_003599622.1| geranyltranstransferase [Bacillus megaterium DSM 319] gi|294804206|gb|ADF41272.1| geranyltranstransferase [Bacillus megaterium DSM 319] Length = 298 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 133/237 (56%), Gaps = 10/237 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + R++T L +++ + + L ++ Y+L GGK++R L+ Sbjct: 6 NLKEYISFTKDRVETRLPEVVKALHAPVN------LKESMLYSLTAGGKRLRPVLLFATL 59 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + L A+E IH YSLIHDDLPSMD+ +RRGKPT H Y E TAI+AG+ Sbjct: 60 HAFGKDESMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDA 119 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT +F++IS ++ +++ QL+ L G +GM+ GQ+ D++ E + ++ Sbjct: 120 LLTNSFQLISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEY 179 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTG L+ F ++GAI+A A+ ++E L F +++G+ FQ+ DD+LD E K Sbjct: 180 IHLHKTGKLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEK 236 >gi|254719767|ref|ZP_05181578.1| Polyprenyl synthetase [Brucella sp. 83/13] gi|265984787|ref|ZP_06097522.1| polyprenyl synthetase [Brucella sp. 83/13] gi|264663379|gb|EEZ33640.1| polyprenyl synthetase [Brucella sp. 83/13] Length = 304 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 112/235 (47%), Positives = 154/235 (65%), Gaps = 3/235 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 + L + ++ L LL + + RL++A+R+ L GGK++R FLV E A Sbjct: 7 DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF + LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ Sbjct: 67 ALFGQHGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDS 126 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180 LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + + Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q MKTGAL+ FACE+GAI+A AS+ ++ER+ FG +G+ FQLADDLLD D Sbjct: 187 QAMKTGALIRFACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAG 241 >gi|212636370|ref|YP_002312895.1| polyprenyl synthetase [Shewanella piezotolerans WP3] gi|212557854|gb|ACJ30308.1| Polyprenyl synthetase [Shewanella piezotolerans WP3] Length = 293 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 94/238 (39%), Positives = 138/238 (57%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L L +RI+ +L + + +L +A+++ AL+GGK+IR FLV Sbjct: 2 LAESLVTYQQRINQLLATRIDALDDI-----DPKLKAAMKHGALIGGKRIRPFLVYAIGE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + NV T AAIEC+H YSLIHDDLP+MD+ +RRG+PTVHI YDE TAI+AG+ L Sbjct: 57 MLNVKLETLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAYDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 AFEIIS P + + ++ +L + G GM GGQ +D+ D+ I+ + + Sbjct: 117 QALAFEIISEPIKNIAPSQNLAMVKALANASGYSGMCGGQAMDLSATDKQIELATLIQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 K+KTGAL+ A E I A + +E++ L F + +G+ FQ+ DD+LD E+L K Sbjct: 177 KLKTGALIRCAVEFAIIAAKINDDERQALVDFADAIGLAFQVQDDVLDIIASTEELGK 234 >gi|254700427|ref|ZP_05162255.1| geranyltranstransferase [Brucella suis bv. 5 str. 513] gi|261750926|ref|ZP_05994635.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] gi|261740679|gb|EEY28605.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] Length = 304 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 112/235 (47%), Positives = 153/235 (65%), Gaps = 3/235 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 + L + ++ L L+ + + RL++A+R+ L GGK++R FLV E A Sbjct: 7 DFTTLLNRRAMEVEAALAGLMDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ Sbjct: 67 ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180 LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E DE + + Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q MKTGAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241 >gi|228476147|ref|ZP_04060855.1| geranyltranstransferase [Staphylococcus hominis SK119] gi|228269970|gb|EEK11450.1| geranyltranstransferase [Staphylococcus hominis SK119] Length = 296 Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 94/239 (39%), Positives = 136/239 (56%), Gaps = 10/239 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L + E + I+ LD ++ + N +L +++Y+L GGK+IR LV Sbjct: 1 MKMMLKKSMNELIEIINNNLDGIIK------SSPLNTKLEESMQYSLDAGGKRIRPVLVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + N N+ L+ A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+A Sbjct: 55 LTLEVLNENYKKGLQTALALEMIHTYSLIHDDLPAMDNDDFRRGKLTNHKVYGEWKAILA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLT +FE+I++ K L + +++ L H+ G GM+GGQ LD+ E I+ + Sbjct: 115 GDALLTKSFELIANDKN-LDAETKVKVISRLAHDSGNLGMVGGQTLDMDSENTPIELHTL 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I K KTGAL+ F+ S A +A+ ++ L CF E+LG++FQ+ DDLLD D K Sbjct: 174 EQIHKAKTGALLKFSILSAADIANVNKEILNTLDCFSEHLGLMFQIKDDLLDVYGDEKK 232 >gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941] gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941] Length = 299 Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 123/235 (52%), Gaps = 6/235 (2%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M P+ ++ + ++++ L + + +RL A+RY+LL GGK++R L Sbjct: 1 MRSASPAGVEGFLA-LREVIEEYL-EGLRFTEEPALERLQEAMRYSLLAGGKRVRPLLCM 58 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E ASLF L AAIE IH +SLIHDDLP+MDN RRGKPT H ++ E AI+A Sbjct: 59 ESASLFGAPPERVLPSAAAIELIHTFSLIHDDLPAMDNDDFRRGKPTSHKKFGEAMAILA 118 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ + +I+ + + + + ++ L H GL G+ GGQ LD ++ Sbjct: 119 GDAFFGESLALITDHQEGSAEQVLA-VVRELAHATGLAGLAGGQALDLEHTGRRAGPKEL 177 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ + GAI+A A + E + + LG+ FQ+ DD+LD Sbjct: 178 ELTHHHKTGALIRASARIGAILAGAGEEGLEAISRYATELGLCFQIVDDVLDAVG 232 >gi|73667184|ref|YP_303200.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake] gi|72394325|gb|AAZ68602.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake] Length = 283 Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 90/215 (41%), Positives = 128/215 (59%), Gaps = 3/215 (1%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+ + S + + D LL++IRY++ GK IR FLV A +F+VN L V AA+E Sbjct: 24 LIQKLESMLPENNQDILLTSIRYSIFSPGKHIRPFLVNAVAQMFDVNVDRTLPVSAAVEI 83 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSLIHDDLP MDN IRRG+ + H +++E AI+ G+ LLT AFEI+S+ Sbjct: 84 IHVYSLIHDDLPGMDNEEIRRGQASSHKKFNEAVAILTGDALLTLAFEILSTINE--SPL 141 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 IR +++ +L H IG QGM+ GQ+LD + D ++ I +KT CE G I+ + Sbjct: 142 IRCRIIKTLAHAIGYQGMIQGQILDTETIAKDINEIQNIHVLKTAQFFSAICELGGILGN 201 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 AS + L +G NLG FQ+ DD+ D ++D K Sbjct: 202 ASNIQLNALANYGLNLGHAFQIKDDIADEDQDKSK 236 >gi|194466515|ref|ZP_03072502.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23] gi|194453551|gb|EDX42448.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23] Length = 290 Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 87/239 (36%), Positives = 127/239 (53%), Gaps = 15/239 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + L ++I+ L L L A+ Y+L+ GGK++R L Sbjct: 1 MSTPLPILKEQIENYLSKSLAADVDQA------TLRDAMNYSLMAGGKRLRPALTLATIE 54 Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + LR +A+E +H YSLIHDDLP+MDN +RRGKPT H ++ A +AG+G Sbjct: 55 MLGGTINDDLLRAASALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDG 114 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180 LLT AF+ ++ L N+RSQL L L G GM+ GQ DI+ E + Q+ + Sbjct: 115 LLTLAFQWVAD--NHLPANVRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLTLNQLRYL 172 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + KTG L+ +A +G IM S K+ L FGEN G+ FQ+ DDL+D E++ K Sbjct: 173 HRQKTGELIRYAVLAGGIMMDQSAEIKQELAAFGENYGLAFQIYDDLMDILSTTEEMGK 231 >gi|313672239|ref|YP_004050350.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM 19672] gi|312938995|gb|ADR18187.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM 19672] Length = 298 Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 90/244 (36%), Positives = 142/244 (58%), Gaps = 13/244 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + + ++ +K++D+ L+ ++ +Q+ D L+ A+RY+L GGK++R L+ Sbjct: 1 MKLDINNYIKFWAKKVDSWLEQYVISN-----SQYIDGLVEAMRYSLFAGGKRLRPALIY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +F+ AA+E +H YSLIHDDLP+MD+ +RRGKPT H+ Y E AI+A Sbjct: 56 SSFGIFDGYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHVVYGEGVAILA 115 Query: 120 GNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDET 175 G+ LLT AFEI+ SS + + + L G +GM+GGQ D++ E F ++ Sbjct: 116 GDALLTKAFEIMTSSSLNPDVDPVMMLEAANKLAIATGEKGMVGGQYADLKAEGGFFNDG 175 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 V I KT AL+ + CE GAI+ +A+ EK+ + FG+ +G+ FQ+ DD+LD E Sbjct: 176 TVSFIHLNKTAALISYCCELGAILGYATDEEKKDMSQFGKKIGLAFQIIDDILDLTCTTE 235 Query: 233 DLPK 236 +L K Sbjct: 236 ELGK 239 >gi|291520797|emb|CBK79090.1| Geranylgeranyl pyrophosphate synthase [Coprococcus catus GD/7] Length = 303 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 86/236 (36%), Positives = 131/236 (55%), Gaps = 13/236 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L +L+E + I+ +L+ +L + A +T + SA+RY+L+ GGK+IR L+ E Sbjct: 3 LEQELKEKTADIEKLLERMLPEEAGLQKT-----IFSAMRYSLMAGGKRIRPLLIAETYR 57 Query: 64 LFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + A AAIE IH YSLIHDDLP++DN RRG+ T H Y E AI+AG+ Sbjct: 58 FFGGTDMALAEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRLTSHKVYGEAMAILAGDA 117 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQ--DEFIDETQ 176 LL YAFE S +D+ ++ + G+ GM+GGQ++D++ + I E Sbjct: 118 LLNYAFETASKAMDHARDDEELLRVMKAFRILSSKPGINGMIGGQVVDVELTGKPIPEKT 177 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I ++KTGAL+ A GA +A AS + + ++G+ FQ+ DD+LD Sbjct: 178 LRFIFELKTGALIEAAMMIGAQLAGASDEQIAAVEKAAGDIGMAFQIQDDVLDVIG 233 >gi|51892982|ref|YP_075673.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum IAM 14863] gi|51856671|dbj|BAD40829.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum IAM 14863] Length = 297 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 125/240 (52%), Gaps = 11/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M G + ++++ LD + RL+ A+RY+LL GGK++R L Sbjct: 1 MRGEFQQYMAARRQQVEAALDRYTAGLDA------PSRLVEAMRYSLLAGGKRLRPILTI 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + LF + + A+E IH YSLIHDDLP MD+ +RRG+PT H Y E A++A Sbjct: 55 AASELFGLEAADVMPGACALEMIHTYSLIHDDLPCMDDDDLRRGRPTCHKVYGEAMAVLA 114 Query: 120 GNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DET 175 G+ LLT AF +++ ++ + L H G +GM+GGQ+ D+ E DE Sbjct: 115 GDALLTQAFALMAEQAAVPRVGPARAVRAAAELAHAAGAEGMVGGQVEDLAWEGRQADEP 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q+ I +KTGAL A G I+A A + + +RL + + G+ FQ+ DD+LD D Sbjct: 175 QLRRIHSLKTGALFRAAVRMGGILAGAGEEDLDRLGRYATHFGLAFQIWDDVLDVTGDAA 234 >gi|260438375|ref|ZP_05792191.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876] gi|292808961|gb|EFF68166.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876] Length = 297 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 75/235 (31%), Positives = 119/235 (50%), Gaps = 10/235 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN +L+ + D ++ + L + N L A+ Y++ GGK++R L+ Sbjct: 1 MN--FKEELRIRTDYADNVVKEFLSKEEG-----FNKELCEAMNYSVNAGGKRLRPILLH 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF + AA E +H YSL+HDDLP++DN RRG PT H ++ E TAI+A Sbjct: 54 TFYKLFGGDSDIVKPCMAAYEMLHTYSLVHDDLPAIDNDNYRRGMPTTHARFGEATAILA 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+GLL A+E + + G+ GMLGGQ D E I + + Sbjct: 114 GDGLLHQAYETFIKIFDTEISTRTVKALKIFGDKTGINGMLGGQSADVLHTGEIISDELL 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I + KTGAL+ A +G+++A + + +++ GE +G+ FQ+ DD+LD Sbjct: 174 YYIYEKKTGALIEGAMLTGSVLAGCNDEDLAKIKRVGELVGLAFQIKDDILDIYG 228 >gi|77919267|ref|YP_357082.1| geranyltranstransferase [Pelobacter carbinolicus DSM 2380] gi|77545350|gb|ABA88912.1| farnesyl-diphosphate synthase [Pelobacter carbinolicus DSM 2380] Length = 296 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 121/235 (51%), Gaps = 10/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + L+E ++D LD L + L A+RY+ GK+IR L+ Sbjct: 2 DLNAYLKERRAQVDKALDTYLP-----GEDVLPISLHKAMRYSTFAAGKRIRPILMMAAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + A+E IH YSLIHDDLP+MD+ RRG+PT H Y + AI+AG+ Sbjct: 57 EAVGGTVDKVMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKVYGDALAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLS--LTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 LLT AF ++S ++ + +S + G GM+GGQ++D+ E ID + Sbjct: 117 LLTEAFILLSRLGEDGGVSLEAARRVSADIARCAGSMGMVGGQVVDMDSEGKEIDLATLE 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I KTGAL+ + +SGA++ AS + + L + + G+ FQ+ADD+LD D Sbjct: 177 YIHTRKTGALILASVQSGAVLGGASSEQVDNLGRYAKAAGLAFQVADDILDIVGD 231 >gi|154502459|ref|ZP_02039519.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149] gi|153796855|gb|EDN79275.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149] Length = 300 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 76/234 (32%), Positives = 121/234 (51%), Gaps = 10/234 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 +E + +I+ IL L + + + ++ A+ Y+ L GGK++R L+ E Sbjct: 6 SFKEIQKEKTAQIERILKAYLPRAQG-----YQEVIMDAMSYSMLAGGKRLRPMLMQETY 60 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I+ G+ Sbjct: 61 RLFGGADSVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMGILTGDA 120 Query: 123 LLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 LL YAFE +S + + + + L G+ GM+GGQ++D++ ID ++ Sbjct: 121 LLNYAFETAASAFETAPEKSLLIGKAIRILGQKAGIYGMIGGQVVDVKSSGKKIDGEKLE 180 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I ++KTGAL+ + GA++A A + + +G+ FQ+ DD+LD Sbjct: 181 FIYRLKTGALIEASMMIGAVLAGADDESVQVVEEIAAKVGMAFQIQDDILDVIS 234 >gi|251796322|ref|YP_003011053.1| polyprenyl synthetase [Paenibacillus sp. JDR-2] gi|247543948|gb|ACT00967.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2] Length = 302 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 83/244 (34%), Positives = 124/244 (50%), Gaps = 13/244 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + + L E + ++ L + L + +L ++ Y+L GGK++R LV Sbjct: 1 MITDIKTYLHECAALVEKSLPEALP-----AEWNIPPQLRESMLYSLQAGGKRLRPALVL 55 Query: 60 ECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 A + A L V AIE IH YSL+HDDLP+MDN RRGK T H + E A Sbjct: 56 AAAEAVHGQAAAARHALPVACAIEYIHTYSLVHDDLPAMDNDDYRRGKLTNHKVFGEAMA 115 Query: 117 IIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FI 172 I+AG+ LLT+AF +I + + + ++ L G +GM+GGQ D+Q E Sbjct: 116 ILAGDALLTHAFHLIPKVARLGGISAEVALDIVEDLAMLAGARGMVGGQAADMQGEQGIT 175 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ I KT L+ F+ +G + AS + E LR +G N+G+ FQ+ DD+LD Sbjct: 176 SIEELEYIHLHKTSDLIVFSVTAGGRIGGASAEQLEALRHYGRNIGLAFQIQDDILDLIG 235 Query: 233 DLPK 236 D K Sbjct: 236 DEKK 239 >gi|54308001|ref|YP_129021.1| putative geranyltranstransferase [Photobacterium profundum SS9] gi|46912427|emb|CAG19219.1| putative geranyltranstransferase [Photobacterium profundum SS9] Length = 300 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 88/239 (36%), Positives = 119/239 (49%), Gaps = 10/239 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 N L L+ R + L L Q + L+ ++Y LLGGK+ R FL Sbjct: 4 NLTLSQSLKHYQDRSNQHLAQWL-----EAQPFADQALVKTMKYGTLLGGKRARPFLTYI 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + AA+ECIH YSLIHDDLP+MD+ +RRG PT HI +DE AI+AG Sbjct: 59 TGQMLGAECADLDTPAAAVECIHAYSLIHDDLPAMDDDELRRGHPTCHIAFDEALAILAG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 + L T AFEI++ K N R ++ L G GM GQ LD++ E +D Q+ Sbjct: 119 DALQTLAFEILADGKLNDDGNTQRIAMIKELAQASGAAGMCVGQALDLEAEGKHVDLQQL 178 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I K KTGAL+ A GA+ A +L F + +G+ FQ+ DD+LD D Sbjct: 179 ETIHKHKTGALIRCAVRLGALAAGQKGVAVLPQLNQFADAIGLAFQVQDDILDVTSDTE 237 >gi|238783627|ref|ZP_04627648.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970] gi|238715505|gb|EEQ07496.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970] Length = 306 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 89/244 (36%), Positives = 133/244 (54%), Gaps = 13/244 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 + +L + +R++ L D + L+ A+RY A+LGGK++R +LV Sbjct: 7 STDFSQQLAAHQQRVNQALLDFIAPL-----PFGESDLVEAMRYGAVLGGKRLRPYLVYA 61 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F ++ AAIECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG Sbjct: 62 TGQMFGLSLTALDAPAAAIECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAG 121 Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 + L T AF I++ + + D R ++ L H G+ GM GGQ LD++ E I ++ Sbjct: 122 DALQTLAFTILAEAEMPDVADKDRLAMVAELAHASGVAGMCGGQALDLEAEARQISLAEL 181 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDCEED--- 233 I + KTGAL+ A GA+ A A L + E +G+ FQ+ DD+LD D Sbjct: 182 EQIHRHKTGALIRAAVRLGALAAGARGRAALPLLDRYAEAIGLAFQVQDDILDVIGDTAT 241 Query: 234 LPKK 237 + K+ Sbjct: 242 IGKR 245 >gi|291519198|emb|CBK74419.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens 16/4] Length = 305 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 77/238 (32%), Positives = 127/238 (53%), Gaps = 11/238 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + ++L ++ + ++ L + A++Y++ GGK++R L+ E Sbjct: 10 DINNELIVRAEAAEDVVIRFLPDVEG-----LQSSIFDAMQYSVTAGGKRLRPILMNETF 64 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF AAIE IH YSL+HDDLP+MDN +RRGKPT H Y E ++AG+ Sbjct: 65 TLFGGEGDVIEPFMAAIELIHTYSLVHDDLPAMDNDSLRRGKPTTHAVYGEAMGVLAGDA 124 Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQV 177 LL YAFE + D +R + M L G+ GM+GGQ++D++ E + + ++ Sbjct: 125 LLNYAFETALNAYDADIDTVRVTEAMRILARKAGVFGMIGGQVVDVESEKKQLEMTKEKI 184 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I ++KTGAL+ A GA++A A++ + + + +G+ FQ+ DD+LD D Sbjct: 185 DFIYELKTGALIEAAMMIGAVLAGATEQQVTTVENVAKKIGLAFQIQDDILDVIGDEA 242 >gi|257875398|ref|ZP_05655051.1| geranyltranstransferase [Enterococcus casseliflavus EC20] gi|257809564|gb|EEV38384.1| geranyltranstransferase [Enterococcus casseliflavus EC20] Length = 295 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 84/239 (35%), Positives = 140/239 (58%), Gaps = 15/239 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 + +E++ I+ +++ + + S + RL +++Y++ GGK+IR L+ + Sbjct: 1 MKEFTKEHAPLIEEVMERFVKEHTS------DQRLFESMQYSIQAGGKRIRPLLLVATVA 54 Query: 64 LFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F+ TA+ + AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+G Sbjct: 55 AFHKPINTAVYQCAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDG 114 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LLT AF++++ +++ N + L+ L+ G QGM+ GQ DIQ E + ++ I Sbjct: 115 LLTAAFQLVAMA--EIEANQKVLLLQQLSKAAGTQGMVAGQAADIQGENQALRLEELMSI 172 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + KTG L+ FA +G ++A ++ L F +++G+ FQ+ DDLLD E+L K Sbjct: 173 HERKTGELIRFAVIAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGK 231 >gi|225076775|ref|ZP_03719974.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens NRL30031/H210] gi|224951873|gb|EEG33082.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens NRL30031/H210] Length = 298 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 12/241 (4%) Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57 MN L + Q+ + + +L L ++Q L A+RY L GGK++R L Sbjct: 1 MNPANELKTWQQKAQAQTELLLVHFLPS-----ESQVPHTLHEAMRYVTLGGGKRLRPLL 55 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V + L N + AAIE +H YSL+HDD+P+MDN +RRGKPT H+QYDE TA+ Sbjct: 56 VLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATAL 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175 + G+ L T AF+++S P T L + ++ +L G GM GGQ +D+ + + +++ Sbjct: 116 LVGDALQTQAFDVLSRP-TGLPAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQA 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 ++ + +KTGAL+ A GA+ + + + L + LG+ FQ+ DD+LDCE D Sbjct: 175 ELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQTLDHYAAKLGLAFQVIDDVLDCEADT 234 Query: 235 P 235 Sbjct: 235 A 235 >gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804] gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii] Length = 303 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 83/241 (34%), Positives = 129/241 (53%), Gaps = 16/241 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62 LQ ++ I+ +LD+ L + RL A+RYA+LGG K+IR+ LV Sbjct: 7 AFADWLQGRAQHIEAVLDECLPAADA-----LPARLHEAMRYAVLGGGKRIRAALVYAAG 61 Query: 63 SLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 VN R AA+E IH YSLIHDDLP MD+ +RRG+PT H+Q+DE TA Sbjct: 62 QACPVNGSAVAIQASMDRAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTTHVQFDEATA 121 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE 174 ++AG+ L AFE+++ + + Q +L G GM GGQ +D+ + + Sbjct: 122 MLAGDALQPLAFELLAD--MPIAPALVVQATQALARAAGSLGMAGGQAIDLHSVGQALSR 179 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 ++ + MKTGA++ + G I++ AS + ++ L + + +G+ FQ+ DD+LD D Sbjct: 180 DELQTMHSMKTGAMLACSVALGGIVSGASSSTRQALDDYAQAVGLAFQVVDDILDVTADS 239 Query: 235 P 235 Sbjct: 240 A 240 >gi|187250684|ref|YP_001875166.1| geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum Pei191] gi|186970844|gb|ACC97829.1| Geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum Pei191] Length = 334 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 83/270 (30%), Positives = 130/270 (48%), Gaps = 45/270 (16%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L+ + ++ L +L+ A+ + + ++ Y+L GGK++R LV Sbjct: 1 MNE-FEKYLKTKAAFVEKGLSKYILKIAN-----SPEVIKDSMAYSLEAGGKRVRPVLVM 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A F + A+E +H YSLIHDDLPSMDN +RRGKPT H Y E A++A Sbjct: 55 AAAEAFGKKAADVMPAACAVEMVHTYSLIHDDLPSMDNDSLRRGKPTNHKVYGEDLALLA 114 Query: 120 GNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----- 172 G+ LLTYAFE+ + + + + + +G +GM+GGQ+ DI E + Sbjct: 115 GDALLTYAFEVFAQNGDVKSIGHKNTLKALQLFANGVGSEGMVGGQVTDIYAEGLIEGKF 174 Query: 173 -------------------------------DETQVFMIQKMKTGALMCFACESGAIMAH 201 ET + I KTGAL+ + E+GA++A Sbjct: 175 KRITAVKKESKALSKKSVKYFLMPAKLKEVSAETVLSYIHANKTGALIRSSIEAGAVLAG 234 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCE 231 AS+ ++ +R +G +G+ FQ+ DD+LD Sbjct: 235 ASEADRANMRKYGNAMGLAFQIVDDILDVT 264 >gi|190575335|ref|YP_001973180.1| putative geranyltranstransferase [Stenotrophomonas maltophilia K279a] gi|190013257|emb|CAQ46891.1| putative geranyltranstransferase [Stenotrophomonas maltophilia K279a] Length = 292 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 10/227 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 RI++ LD L A + RL A+RY++LGG K++R LV LF Sbjct: 7 FARWRDRIESQLDAALPSPA-----EAPQRLHQAMRYSVLGGGKRMRPLLVYASGHLFGT 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + ++E IH YSL+HDDLP+MD+ +RRGKPT H+ +DE TAI+AG+ L T A Sbjct: 62 QPESLDAAAMSVELIHAYSLVHDDLPAMDDDALRRGKPTTHVAFDEATAILAGDALQTRA 121 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185 F +++ L +R + +L H G GM GGQ +D + + + +KT Sbjct: 122 FGLLADA--PLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKT 179 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 GAL+ A GA+ A + + +L F + LG+ FQ+ DD+LD E Sbjct: 180 GALIRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEA 226 >gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6] gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6] Length = 298 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 77/220 (35%), Positives = 120/220 (54%), Gaps = 5/220 (2%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76 T LD + ++ + L A+RY +L GGK++R LV A + + ALR Sbjct: 12 TALDQVEIELDRQVPADAPAELGLAMRYGVLDGGKRLRPLLVLAAAGCVDGHPEAALRAA 71 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SP 134 A+E IH YSLIHDD+P MDN +RRGKPTVH+QY E A++AG+ + AFE+++ Sbjct: 72 CAVELIHAYSLIHDDMPCMDNDVLRRGKPTVHVQYGEARAMLAGDAMQALAFEVLTPEDT 131 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFA 192 + ++++L L G+ GM GGQ +D + +DE + + KTGAL+ + Sbjct: 132 DDGVPPALQARLCSLLARASGVLGMAGGQAIDLAHVGKQMDEAALQDMHGRKTGALLQAS 191 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 GA + + + L +G +G+ FQ+ DD+LD + Sbjct: 192 VLMGAACGRTTPAQWQALADYGWAIGLAFQVVDDILDVTQ 231 >gi|304440276|ref|ZP_07400166.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371325|gb|EFM24941.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 289 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 83/232 (35%), Positives = 129/232 (55%), Gaps = 12/232 (5%) Query: 15 RIDTILD--DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 R + +++ D L T ++ +++Y+L GGK++R L S+FN + Sbjct: 5 RYEELINIIDQNLYTNIPTTDDFQKKIYESMKYSLSTGGKRVRPILALVSYSIFNDDSKN 64 Query: 72 ---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + A+E IH YSLIHDDLP+MDN IRRGKPT H Y+E AI+AG+GLL A Sbjct: 65 FSEIIPFAVALEYIHTYSLIHDDLPAMDNDDIRRGKPTNHKVYNEAIAILAGDGLLNLAA 124 Query: 129 EIISSPKTQLKDNIRSQLMLSLTH----NIGLQGMLGGQ--MLDIQDEFIDETQVFMIQK 182 E+++ + D I+ + + + G+QGM+GGQ +D+ + + +V + K Sbjct: 125 EVVAKELEGITDPIKLKRAIKSFRYIFSSSGIQGMVGGQTIDIDLSVDEMSLEEVETMYK 184 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 +KTGAL+ GAIM A+ E + + E LG+ +Q+ DD+LD E+DL Sbjct: 185 LKTGALIKAPLAVGAIMGGATPEELISIEGYAEQLGLQYQIKDDILDYEDDL 236 >gi|288553327|ref|YP_003425262.1| geranyltranstransferase [Bacillus pseudofirmus OF4] gi|288544487|gb|ADC48370.1| geranyltranstransferase [Bacillus pseudofirmus OF4] Length = 296 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 92/240 (38%), Positives = 130/240 (54%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L E K ID L + + D L A+ Y+L GGK++R L+ Sbjct: 1 MNEQLKGFFNEYRKLIDARLPSYIEDL------RAPDTLKQAMTYSLKAGGKRVRPLLLL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 FN + AIE IH YSLIHDDLP+MD+ RRG+PT H Y E AI+A Sbjct: 55 ATLDGFNRPIEDGFDLACAIEMIHTYSLIHDDLPAMDDDDTRRGQPTNHKVYGEAMAILA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176 G+ LLTY+FE+I+S ++ ++ + L G GM+GGQ+ DI+ E T + Sbjct: 115 GDALLTYSFELITSMSAVREEPAKALTLVRELAKASGPCGMVGGQVADIEGENRSLTVQE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I KTG L+ ++ +GA++A AS+ + E LR F LG++FQ+ DD+LD E D K Sbjct: 175 LADIHHHKTGDLLAYSIIAGAVLADASEEDLEHLRMFAIELGLLFQIKDDILDVEGDSDK 234 >gi|258591119|emb|CBE67414.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [NC10 bacterium 'Dutch sediment'] Length = 312 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 83/248 (33%), Positives = 121/248 (48%), Gaps = 23/248 (9%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 L L E +D L+ L Q + + A+RY++ GGK++R L+ Sbjct: 4 EELRRYLDERRLLVDEALEQYLPQASDP-----PKEIHEAVRYSVFAGGKRLRPILILAA 58 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 AL AAIE IH YSLIHDDLP+MD+ RRG+ T H Y E AI+AG+ Sbjct: 59 TEAAGGQMEQALGAAAAIEMIHTYSLIHDDLPAMDDDDYRRGRLTCHKVYGEAMAILAGD 118 Query: 122 GLLTYAFEIISSPKTQLKD---------------NIRSQLMLSLTHNIGLQGMLGGQMLD 166 LLT AF ++S+ R ++ + G +GM+GGQ++D Sbjct: 119 ALLTQAFILLSAENPPCPPLAKGGWGDLKGVYDSEARLMVIREIAEAAGSKGMVGGQVVD 178 Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + +D ID + + + KTGAL+ G I+A A + E L +GE +G+ FQ+ Sbjct: 179 MLQEDREIDLPTLTYLHEHKTGALIRVCLRVGGILASAGSEQMEALTRYGERIGLAFQIV 238 Query: 225 DDLLDCEE 232 DD+LD E Sbjct: 239 DDILDLEG 246 >gi|115379699|ref|ZP_01466777.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps) [Stigmatella aurantiaca DW4/3-1] gi|310821402|ref|YP_003953760.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1] gi|115363289|gb|EAU62446.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps) [Stigmatella aurantiaca DW4/3-1] gi|309394474|gb|ADO71933.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1] Length = 312 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 76/236 (32%), Positives = 117/236 (49%), Gaps = 12/236 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62 +L E + + LD+ A H L +AIR ALL GK++R L E Sbjct: 18 DFRRRLHERQQLVARALDEHFPPGAGH--------LTAAIREALLADGKRLRPILCLEAC 69 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + AL A+E IH +L+HDDLP+MD+ R G+P +H + E AI+AG+ Sbjct: 70 EWVGGSVKAALPAACALEMIHKMTLVHDDLPAMDDAETRNGRPALHKVHGEALAILAGDA 129 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180 LL +AF +++S + + + + L +G G+ GGQ LD+ Q E + ++ + Sbjct: 130 LLVHAFGLLASTR-GVPAERVTVAIRRLCQALGTTGLAGGQALDVLSQTEGVTPEKLDHV 188 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT + A GA M A ++ E L +G LG FQ++DDLLD ++ K Sbjct: 189 HTWKTASFFEVAIVIGAEMGGADASQVEALARYGMLLGRAFQISDDLLDARDEKGK 244 >gi|166030417|ref|ZP_02233246.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC 27755] gi|166029775|gb|EDR48532.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC 27755] Length = 300 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 83/244 (34%), Positives = 132/244 (54%), Gaps = 13/244 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 +N + ++ + I+ L + L + Q + ++ A+ Y+LL GGK++R L+ Sbjct: 3 LNLDFKVQKEQKVREIEDSLQNYLPK-----QKGYQKIIMEAMGYSLLAGGKRLRPMLMK 57 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E +LF + AAIE +H YSL+HDDLP+MDN RRG+ T H+ Y E AI+A Sbjct: 58 ETYTLFGGHSKVIEPFMAAIEMVHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMAILA 117 Query: 120 GNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175 G+ LL YAFE ++ + L G+ GMLGGQ++D+++ + + Sbjct: 118 GDALLNYAFETAVKAFVLEPEDSMTIGNAIRVLGEKAGIYGMLGGQVIDVKETGHAVSKD 177 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 + I ++KTGAL+ A GAI+ ASQ E + + +G+ FQ+ DD+LD +E Sbjct: 178 VLDTIYELKTGALIEAAMMIGAILGGASQEEVKTVERIASLVGLAFQVQDDILDVISTQE 237 Query: 233 DLPK 236 +L K Sbjct: 238 ELGK 241 >gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228] Length = 293 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 88/234 (37%), Positives = 142/234 (60%), Gaps = 10/234 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + L+ ++ I+ L LL Q + +L +++Y LL GGK+IR L A Sbjct: 4 IKNILKAKAEVIEENLIKLL-----DCQDELAPQLTKSMKYTLLSGGKRIRPILTLLIAE 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L N+ AL+ G+A+E IH YSLIHDDLP+MD+ +RRGK T H+ + E TAI+AG+GL Sbjct: 59 LLEGNYQAALKAGSALEMIHSYSLIHDDLPAMDDDKLRRGKKTNHLVFGEATAILAGDGL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181 LTYAF++++ +LK +++ +++ + G QGM+GGQ+LD++ E D T ++ + Sbjct: 119 LTYAFQVLADL--ELKPDLKVKIIANTAKFSGYQGMVGGQVLDLEAENKDLTLQEMQKVH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ + +G + EK+ L + E +G++FQ+ DDLLD + Sbjct: 177 QAKTGALIKASVLNGVYCSDFKPEEKKALLTYAEKIGVLFQIVDDLLDLTGETE 230 >gi|168335575|ref|ZP_02693638.1| Polyprenyl synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 288 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 90/228 (39%), Positives = 126/228 (55%), Gaps = 12/228 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 +ID +L + L + +T RL A+RY++L GGK+IR L+ A Sbjct: 8 KIDEMLXNYLAK-----ETGECTRLQEAMRYSVLQGGKRIRPILMRLAYEAVGGTGNIA- 61 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 AIE +H YSLIHDDLP+MDN +RRG PT H+++DE TAI+AG+GLLT AFEI+ Sbjct: 62 PYMCAIEFVHTYSLIHDDLPAMDNDALRRGLPTNHVKFDEATAILAGDGLLTLAFEIMLQ 121 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 D ++ L G GM+ GQM D+ E I + IQ KTGAL+ Sbjct: 122 DLVSDMDPAKAIAANILATGAGASGMVLGQMYDMFYEGKEISIEMLEKIQLNKTGALIKS 181 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 A + GA++ + S++E L +G LG +FQ+ DD+LD +L K Sbjct: 182 ALKMGAVLGYGSESELFALELYGIYLGKVFQIIDDILDITGQVNELGK 229 >gi|241760634|ref|ZP_04758726.1| geranyltranstransferase [Neisseria flavescens SK114] gi|241318815|gb|EER55341.1| geranyltranstransferase [Neisseria flavescens SK114] Length = 298 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 12/241 (4%) Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57 MN L + Q+ + + +L L ++Q L A+RY L GGK++R L Sbjct: 1 MNPANELKTWQQKAQAQTELLLAHFLPS-----ESQVPHTLHEAMRYVTLGGGKRLRPLL 55 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V + L N + AAIE +H YSL+HDD+P+MDN +RRGKPT H+QYDE TA+ Sbjct: 56 VLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATAL 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175 + G+ L T AF+++S P T L + ++ +L G GM GGQ +D+ + + +++ Sbjct: 116 LVGDALQTQAFDVLSRP-TGLSAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQA 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 ++ + +KTGAL+ A GA+ + + + L + LG+ FQ+ DD+LDCE D Sbjct: 175 ELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQTLDHYAAKLGLAFQVIDDVLDCEADT 234 Query: 235 P 235 Sbjct: 235 A 235 >gi|262382413|ref|ZP_06075550.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295291|gb|EEY83222.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 324 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 12/224 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + IL + + + T L I Y L LGGK+IR L +++N + A++ Sbjct: 4 FENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +E H ++L+HDDL MD RR KPTVH ++ TAI++G+ +L A+++I S Sbjct: 64 PALGLEVFHNFTLLHDDL--MDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGST 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191 + + + + GGQ D++ E + E + + ++KT L+ Sbjct: 122 EHGHLKQVLDLFTQTAAE------ICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLAC 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + ++GA++ ASQ + L FG N+G+ FQL DDLLD D Sbjct: 176 SLKTGALLGGASQEDASNLYAFGINIGLAFQLQDDLLDVYGDTA 219 >gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera] Length = 341 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 14/232 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58 M L S I+T L++ + ++ ++ A+RY++L GGK+ + Sbjct: 46 MQFDLRSYWTTLISEINTKLEEAI-------PVKYPQQIYEAMRYSVLAKGGKRAPPVMC 98 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 LF + L A A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+ Sbjct: 99 VAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAIL 158 Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176 AG+ L F I S P + + +++ + ++G GM GQ LD++ Sbjct: 159 AGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGA---PNS 215 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 V +Q+ K G + + G + A+ ++ RLR +G +G+++Q+ DD+L Sbjct: 216 VDFVQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDML 267 >gi|314936356|ref|ZP_07843703.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80] gi|313654975|gb|EFS18720.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80] Length = 293 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 93/235 (39%), Positives = 135/235 (57%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + E + I+ LD ++ + N +L +++Y+L GGK+IR LV Sbjct: 2 LKKSMNELIEIINNNLDGIIK------SSPLNTKLEESMQYSLDAGGKRIRPVLVLLTLE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + N N+ L+ A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ L Sbjct: 56 VLNENYKKGLQTALALEMIHTYSLIHDDLPAMDNDDFRRGKLTNHKVYGEWKAILAGDAL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT +FE+I++ K L + +++ L H+ G GM+GGQ LD+ E I+ + I Sbjct: 116 LTKSFELIANDKN-LDAETKVKVISRLAHDSGNLGMVGGQTLDMDSENTPIELHTLEQIH 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 K KTGAL+ F+ S A +A+ ++ L CF E+LG++FQ+ DDLLD D K Sbjct: 175 KAKTGALLKFSILSAADIANVNKEILNTLDCFSEHLGLMFQIKDDLLDVYGDEKK 229 >gi|15602398|ref|NP_245470.1| hypothetical protein PM0533 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720796|gb|AAK02617.1| IspA [Pasteurella multocida subsp. multocida str. Pm70] Length = 295 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 84/234 (35%), Positives = 131/234 (55%), Gaps = 12/234 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L L + +RI+T L L +S L A+RY LLGGK+IR FLV Sbjct: 4 LSQDLPQLQQRINTFLAQQLNVDSS------PSPLAEAMRYGVLLGGKRIRPFLVYATGR 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A++E +H YSLIHDDLP+MD+ ++RRG+PT HI +D TAI+AG+ L Sbjct: 58 MLGADLNQLDYAAASVEAVHAYSLIHDDLPAMDDDHLRRGQPTCHIAFDHATAILAGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 +AFEI++ L+ + L+ +L+ G++GM GQ LD+ E I ++ I Sbjct: 118 QAFAFEILTQAPA-LQAEQKLALVQTLSQAAGVKGMCLGQSLDLISEQKHISLIELEQIH 176 Query: 182 KMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTGA++ A + G I + + ++L+ + E +G+ FQ+ DD+LD E + Sbjct: 177 RNKTGAMLSAAIQLGRICSPHFKNDTLAQQLQRYSEAIGLAFQVQDDILDIEGE 230 >gi|304322149|ref|YP_003855792.1| putative geranyltranstransferase (farnesyl-diphosphate synthase) [Parvularcula bermudensis HTCC2503] gi|303301051|gb|ADM10650.1| putative geranyltranstransferase (farnesyl-diphosphate synthase) [Parvularcula bermudensis HTCC2503] Length = 296 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 92/230 (40%), Positives = 134/230 (58%), Gaps = 4/230 (1%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M+ L L + + L++ L+ + RL +A+ + AL GGK++R FLV Sbjct: 1 MSDTLSDYLITRANLVTKSLENRLVINRTESPALG--RLRAAMAHGALGGGKRLRPFLVL 58 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E AS+F + AL AIE +HCYSLIHDDLP+MD+ RRG+P+VH YDE AI+A Sbjct: 59 EAASIFGADDEAALPAATAIEMVHCYSLIHDDLPAMDDADTRRGRPSVHKAYDEAIAILA 118 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+GLLT AF +++ T +L+ L G GM+GGQM+D+ + DE + Sbjct: 119 GDGLLTDAFALLTEEGTYTAPTA-CRLVRELALAAGSGGMVGGQMMDLYPDGGDEAAIVG 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 IQ+ KTGAL+ A GAI+ A+ +++ LR + +G FQ+ DD+LD Sbjct: 178 IQRRKTGALIEAAAVMGAIVGAAAPSDEAALRQYAAAVGEAFQVVDDILD 227 >gi|257462419|ref|ZP_05626833.1| dimethylallyltransferase [Fusobacterium sp. D12] gi|317060083|ref|ZP_07924568.1| geranyltranstransferase [Fusobacterium sp. D12] gi|313685759|gb|EFS22594.1| geranyltranstransferase [Fusobacterium sp. D12] Length = 290 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 117/230 (50%), Gaps = 10/230 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67 ++ + + L+++L Q + + ++YA L GGK+IR L+ +L Sbjct: 1 MRNYREYFNEKLEEILAQYNT------PVWIAEGMQYACLQGGKRIRPQLLFMSLALLGK 54 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L A+E IH YSL+HDDLP+MDN RRG+ T H ++ E AI+ G+ LLT A Sbjct: 55 EIALGLPFALALEMIHSYSLVHDDLPAMDNDEYRRGQLTTHKKFGEANAILIGDALLTNA 114 Query: 128 FEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 F ++ + +++ + G+ GM+GGQ +D+ E I + I + K Sbjct: 115 FSVMVRGSMGKVSSEKILEIVALFSEYAGVDGMIGGQAMDVAYEGKQISYKTLSFIHEHK 174 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 TG L+ I+ AS +++ L +G N+G+ FQ+ DD+LD E D Sbjct: 175 TGRLLLLPILVACILGDASLEQRKALEIYGRNIGLAFQIKDDILDVEGDF 224 >gi|148544405|ref|YP_001271775.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016] gi|184153768|ref|YP_001842109.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112] gi|227363170|ref|ZP_03847304.1| geranyltranstransferase [Lactobacillus reuteri MM2-3] gi|325682725|ref|ZP_08162241.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A] gi|148531439|gb|ABQ83438.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016] gi|183225112|dbj|BAG25629.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112] gi|227071776|gb|EEI10065.1| geranyltranstransferase [Lactobacillus reuteri MM2-3] gi|324977075|gb|EGC14026.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A] Length = 290 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 88/239 (36%), Positives = 127/239 (53%), Gaps = 15/239 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + L ++I+ L L L A+ Y+L+ GGK++R L Sbjct: 1 MSTPLPILKEQIENYLSKSLAADVDQA------TLRDAMNYSLMAGGKRLRPALTLATIE 54 Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + LR +A+E +H YSLIHDDLP+MDN +RRGKPT H ++ A +AG+G Sbjct: 55 MLGGTLNDDLLRAASALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDG 114 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180 LLT AF+ ++ L NIRSQL L L G GM+ GQ DI+ E + Q+ + Sbjct: 115 LLTMAFQWVAD--NHLPANIRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLTLNQLRYL 172 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + KTG L+ +A +G IM S K+ L FGEN G+ FQ+ DDL+D E++ K Sbjct: 173 HRQKTGELIRYAVLAGGIMMDQSAEIKQELAAFGENYGLAFQIYDDLMDVLSTTEEMGK 231 >gi|261365698|ref|ZP_05978581.1| geranyltranstransferase [Neisseria mucosa ATCC 25996] gi|288565797|gb|EFC87357.1| geranyltranstransferase [Neisseria mucosa ATCC 25996] Length = 298 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 84/241 (34%), Positives = 133/241 (55%), Gaps = 12/241 (4%) Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57 MN L + Q+ + + +L+ L + Q L A+RY L GGK++R L Sbjct: 1 MNPANELKAWQQKAQAQTELLLERFLPS-----ENQVPHTLHEAMRYVTLGGGKRLRPLL 55 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 V + L + + + AAIE +H YSL+HDD+P+MDN +RRGKPT H++YDE TA+ Sbjct: 56 VLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATAL 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175 + G+ L T AF+++S P T L + ++ +L G GM GGQ +D+ + + +++ Sbjct: 116 LVGDALQTQAFDVLSRP-TGLPAEHQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQA 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 Q+ + +KTGAL+ A GA+ ++ L + LG+ FQ+ DD+LDCE D Sbjct: 175 QLEQMHSLKTGALIRAAVVLGALACPDLDSDDVRTLDDYAAKLGLAFQVIDDVLDCEADT 234 Query: 235 P 235 Sbjct: 235 A 235 >gi|188534651|ref|YP_001908448.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99] gi|188029693|emb|CAO97572.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99] Length = 299 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 10/230 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67 L + +R++ + + Q + L++AI Y ALLGGK++R FLV ++ + Sbjct: 7 LTSHYQRVNAAIQGFVSQL-----PFQSTPLVNAIEYGALLGGKRLRPFLVYATGNMLHA 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AA+ECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG+ L T A Sbjct: 62 DDAALDAPAAAVECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEDAAILAGDALQTLA 121 Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 F I++ P + R ++ L G+ GM GGQ LD+ E + ++ I + K Sbjct: 122 FSILADAPMPGVTAESRVAMLSELAQASGVAGMCGGQALDLAAEGKRVTLDELEQIHRHK 181 Query: 185 TGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED 233 TGAL+ A GA+ A A L F + +G+ FQ+ DD+LD D Sbjct: 182 TGALIRSAVRLGALSAGAPGRAALPALDRFADAIGLAFQVQDDILDVIGD 231 >gi|167750990|ref|ZP_02423117.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702] gi|167656169|gb|EDS00299.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702] Length = 302 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 72/239 (30%), Positives = 114/239 (47%), Gaps = 10/239 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 +GG + +E + L + + L A Y+L GGK+IR L E Sbjct: 12 DGGFDAVFREYRAIFEKQLRTVCDSFCDNGAKYKA--LYDAASYSLEAGGKRIRPVLAFE 69 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + + A+ A+E IH +SLIHDDLP MDN +RRG+P+ H + E A++AG Sbjct: 70 MCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDNDDMRRGRPSCHKAHGEAVALLAG 129 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + L YA + I + L ++ ++ L GM+ GQ +D +F + + Sbjct: 130 DALSAYAGKYICD--SDLSAEKKTAMIKELYDR--TLGMIEGQTIDTDGKFDTLDGLLSM 185 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 +MKT L+ A G I A A + + R + ++G+ FQ+ DD+LD E+L K Sbjct: 186 YEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILDVTSTVEELGK 244 >gi|169824537|ref|YP_001692148.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328] gi|167831342|dbj|BAG08258.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328] Length = 269 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 79/232 (34%), Positives = 120/232 (51%), Gaps = 17/232 (7%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 +E K I+ L DL + ND++ A++Y L+ G K++R L +FN Sbjct: 4 KEIVKLINNSLKDL---------SFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNE 54 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + +IE IH YSL+HDDL MDN RRGK TVH +Y E A++ G+ LL Y+ Sbjct: 55 SISEPMNYALSIELIHNYSLVHDDLECMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYS 114 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 FE++S +K+ + + + G GM+ GQ+LDI D I E + I KT Sbjct: 115 FEVLSES---IKNEVDAMCANYIVKKSGCFGMIRGQLLDI-DSKISEDNIIEIYDKKTCN 170 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237 L+ + S I++ +L + NLG+ FQ+ DD++D E D+ KK Sbjct: 171 LLKASTVSAGILSKVDHTTLLKLENYAFNLGMAFQIIDDIMDYENDIKINKK 222 >gi|300722008|ref|YP_003711288.1| geranyltranstransferase [Xenorhabdus nematophila ATCC 19061] gi|297628505|emb|CBJ89072.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Xenorhabdus nematophila ATCC 19061] Length = 315 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 5/202 (2%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L +A+++ A+LGGK++R FLV +F ++ + A+ECIH YSLIHDDLP+ Sbjct: 45 DSPLGTAMQHGAVLGGKRLRPFLVYSVGEMFGLSRKSLDAAALALECIHAYSLIHDDLPA 104 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHN 153 MDN +RRG+PT HI++ E AI+AG+ L + AFE+++ + + R ++ L Sbjct: 105 MDNDDLRRGQPTCHIKFGESQAILAGDALQSLAFELLAHYDMPDVALSDRLAMVAELASA 164 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERL 210 G GM GGQ LD++ E ID + I + KTGAL+ A GA A + L Sbjct: 165 SGFAGMCGGQSLDLEAEGKQIDLASLEQIHRHKTGALIRAAARLGAYSAGQRGREVIPLL 224 Query: 211 RCFGENLGIIFQLADDLLDCEE 232 + + +G+ FQ+ DD+LD Sbjct: 225 DQYTQAIGLAFQVHDDILDVIG 246 >gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428] gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428] Length = 293 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 86/236 (36%), Positives = 128/236 (54%), Gaps = 9/236 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L S L K ID LD L + + +T + A+RY+L GGK++R L A Sbjct: 2 ELKSYLTARGKLIDQALDRFLPRASVKPRT-----IHKAMRYSLFAGGKRLRPALTLAAA 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + AL A+ECIH YSLIHDDLP MD+ +RRG+PT H + E A++AG+ Sbjct: 57 EACDGEVARALPAACAVECIHTYSLIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LLT AFEI++ K + + + + L G Q ++GGQ+ D++ E I ++ I Sbjct: 117 LLTIAFEILAQAKETSRYKMPAL-IGELAGASGSQWLIGGQVADLEGEGKKISGAELKYI 175 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KT AL+ + G + A+AS + L FG++LG+ FQ+ DD+LD + K Sbjct: 176 HRCKTAALLTASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQTTEK 231 >gi|332704078|ref|ZP_08424166.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay] gi|332554227|gb|EGJ51271.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay] Length = 298 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 10/234 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + L +++ ++ L L +RLL+++ Y+LL GGK++R L + Sbjct: 4 SAIKEDLLASARHVEGFLRTSLH------GRGVPERLLTSMEYSLLAGGKRLRPVLCLKW 57 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A L ++ A+ A++E IH YSLIHDDLP+MDN +RRGKP+ H Q+DE TAI+AG+ Sbjct: 58 AKLCGLDMEKAMPFAASLELIHTYSLIHDDLPAMDNDDLRRGKPSNHKQFDEATAILAGD 117 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178 GLLT AF +++ L M ++ G GM+GGQ LD++ I Q+ Sbjct: 118 GLLTEAFSLMAQAAESLPAERVVCAMKAVAAAAGAGGMVGGQALDMEYTGKAGISLDQLQ 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + MKTGAL+ AC SGA++A + + E+ +G +G+ FQ+ADD+LD Sbjct: 178 TMHAMKTGALIRVACLSGAMLAGSKASVLEKASTYGAAIGVAFQIADDILDVVG 231 >gi|332524231|ref|ZP_08400457.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2] gi|332107566|gb|EGJ08790.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2] Length = 296 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 78/220 (35%), Positives = 122/220 (55%), Gaps = 4/220 (1%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78 LD + + + L A+RY +L GGK++R LV + ALR A Sbjct: 15 LDAVEAALEAWVPDNAPAGLGEAMRYGVLDGGKRLRPLLVMAACEALGGSREAALRSACA 74 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E IH YSL+HDD+P MDN +RRGKPTVH++Y E A++AG+ + AFEI+ +P + Sbjct: 75 VELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKYGEAQAMLAGDAMQALAFEIL-TPDEGV 133 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196 + +++ L+ L G GM GGQ +D+ + +DE + + + KTGAL+ + + G Sbjct: 134 EPALQASLVRLLARAAGHAGMAGGQAIDLANTGRLLDEATLREMHRKKTGALLLVSVQMG 193 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + + L +GE +G+ FQ+ DD+LDC + K Sbjct: 194 AACGSPAPATWQALSEYGEAIGLAFQVVDDILDCTQASDK 233 >gi|289522987|ref|ZP_06439841.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503530|gb|EFD24694.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 298 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 83/243 (34%), Positives = 121/243 (49%), Gaps = 14/243 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 N L + ++IDT L+++L + + L I Y+LL GGK+IR L Sbjct: 3 NVELKQIFESKKEKIDTYLENILNN------DEIPEVLCQCIAYSLLNGGKRIRPVLCQI 56 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A ++ L + AAIE H SLIHDDLP MDN RRGK T H Y E A++AG Sbjct: 57 TAEKLGIDPDGVLPLAAAIEMAHTASLIHDDLPCMDNDDYRRGKLTNHKVYGEAMAVLAG 116 Query: 121 NGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQ 176 + LL Y FE+ P+ + + +H IG G+ GGQ LDI E +E Sbjct: 117 DSLLAYGFELCLQELPRLGFTQSNILNALKIFSHAIGPCGICGGQALDITQEGHEGEEEF 176 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 ++ + ++KT L+ + + A + A + L +G +LGI FQ+ DD+LD + Sbjct: 177 LWKMCELKTATLLRASITASAALVGAGEKTMSCLHNYGTHLGISFQIIDDILDVTGTISE 236 Query: 234 LPK 236 L K Sbjct: 237 LGK 239 >gi|255022132|ref|ZP_05294135.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756] gi|254968396|gb|EET25955.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756] Length = 304 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 81/238 (34%), Positives = 123/238 (51%), Gaps = 12/238 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61 Q +RI+ +LD+LL RL A+RY+ L GGK++R LV Sbjct: 8 ESFAEFRQRRVERIEKVLDELLPPADI-----LPGRLHEAMRYSTLGGGKRVRPLLVYAG 62 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + R AA+E IH YSL+HDDLP+MDN +RRG+PT H +DE TAI+ G+ Sbjct: 63 GQCLGLADELLDRAAAALEMIHAYSLVHDDLPAMDNDDMRRGRPTCHKAFDEATAILVGD 122 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFM 179 LLT+AF++++ P L + + L L G +GM+GGQ +D+ + Q + Sbjct: 123 ALLTHAFQVLAEPVPGLAPAQQLAMALDLARAAGSRGMVGGQAIDLAAVGHELAQPALEQ 182 Query: 180 IQKMKTGALMCFACES---GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + KTG L+ A + A +A + L + + +G+ FQ+ DD+LD D+ Sbjct: 183 MHLQKTGMLIRCALQLPLQAAAIA-PDASVASALLRYADRIGLAFQVQDDILDEIGDI 239 >gi|261402402|ref|YP_003246626.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7] gi|261369395|gb|ACX72144.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7] Length = 317 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 19/229 (8%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69 E K+ID L + + ND L +A ++ L GGK++R +L +L N Sbjct: 6 EILKKIDEELKKYVDK---------NDELYNASKHLLFAGGKRLRPYLTVITYNLKKDNM 56 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 L AA+E IH Y+LIHDD+ MDN RRGKPTVH+ Y E AI+AG+ L AFE Sbjct: 57 EEILPAAAAVELIHNYTLIHDDI--MDNDDERRGKPTVHVVYGEPIAILAGDLLYAKAFE 114 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGA 187 +S+ K K + +++ + + GQ +D++ E + + + KTGA Sbjct: 115 AVSNIKDSKKAHDVLKIL-----SKACVEVCEGQAMDMKFENYNPTMEEYLEMIRKKTGA 169 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ + E GAIMA S+ EK L+ + + +G+ FQ+ DD+LD D K Sbjct: 170 LLEASVEIGAIMADCSEEEKTALKEYAKRIGLTFQIQDDVLDLIGDKNK 218 >gi|71274508|ref|ZP_00650796.1| Polyprenyl synthetase [Xylella fastidiosa Dixon] gi|71900337|ref|ZP_00682472.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1] gi|71164240|gb|EAO13954.1| Polyprenyl synthetase [Xylella fastidiosa Dixon] gi|71729912|gb|EAO32008.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1] Length = 291 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 91/235 (38%), Positives = 130/235 (55%), Gaps = 13/235 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ L ++ +R D+ L+ L + TQ RL +A+RY +L GGK+IR LV Sbjct: 1 MSKALFTR---WCQRTDSYLERTL-----SILTQAPQRLHAAMRYTVLSGGKRIRPLLVY 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF+V+ AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ Sbjct: 53 AAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILT 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177 G+ L T AFE ++ ++R + +LTH G+ GM GGQ LDI +T + Sbjct: 113 GDALQTLAFECLADA--PADASLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKAL 170 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + +K+G LM A GA+ S + L F LG+ FQ+ DD+LD E Sbjct: 171 EAMHALKSGTLMRAAVRMGALAGDPSPEDLHSLDTFAATLGLAFQVRDDILDIES 225 >gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1] Length = 293 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 128/236 (54%), Gaps = 12/236 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 + + K +D L+ L+ + + A+RY++ GGK++R L A +F V Sbjct: 5 INQAIKDVDEALERLIPAEDT-----FPQEIHRAVRYSVFAGGKRLRPLLTLAAAEIFGV 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L AL AIE +H YSLIHDDLP++D+ RRG+ + H + + AI+AG+ LLT A Sbjct: 60 PRLHALPAACAIEMVHTYSLIHDDLPALDDDDYRRGRLSNHKVFGDAMAILAGDSLLTLA 119 Query: 128 FEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 FE + + +L +L G+ GM+GGQ++D+ E ++ + I + K Sbjct: 120 FETLAAEATAYFAPATVVRLTEALGKAAGMSGMIGGQVVDLLSEGKQVNAATLDYIHRHK 179 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL +SGAIM AS E +RL F +N+G+ FQ+ DD+LD D L KK Sbjct: 180 TGALFTCCIKSGAIMGGASLEEMQRLTVFAQNIGLAFQIVDDILDITGDEAALGKK 235 >gi|255994613|ref|ZP_05427748.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989] gi|255993326|gb|EEU03415.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989] Length = 297 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 80/228 (35%), Positives = 121/228 (53%), Gaps = 13/228 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 IDT + ++LL + L A+ Y+L GGK++R L+ E A + + L Sbjct: 12 IDTKMREILLSKEEIAKP-----LREAMEYSLYAGGKRVRPVLLMEAARAVGGDPGSVLD 66 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 AAIE IH YSLIHDDLP++D+ RRGK T H + E AI+AG+GL A+E++ S Sbjct: 67 YAAAIEFIHTYSLIHDDLPALDDDEYRRGKKTNHKVFGEAMAILAGDGLQALAYEVMLSC 126 Query: 135 KTQLKDN-----IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGA 187 + + + + + G + M+ GQ++DI + T + + +MKTGA Sbjct: 127 IAKSDNMGDEILKKIKAANEIVMAAGTEAMVSGQVMDINSCSDKDSLTMLEKMHRMKTGA 186 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ A GAI+A A + + R +GEN+G+ FQ+ DD LD D Sbjct: 187 LITAAVVVGAILAGADERQVAAFRKYGENIGLAFQMVDDKLDVSGDSK 234 >gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72] gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72] Length = 300 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 123/235 (52%), Gaps = 8/235 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62 + + +R + L +L + T +RL A+RYA+LGG K++R LV Sbjct: 8 DFAAWMGAIQQRTEAALAGVLPE-----PTIAPERLHEAMRYAVLGGGKRVRPLLVHAAG 62 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++ R+ A+E IH YSL+HDD+P MD+ +RRGKPTVH++YD+ TA++ G+ Sbjct: 63 AIGGAQPERLDRIACAVELIHAYSLVHDDMPCMDDDVLRRGKPTVHVEYDDATALLVGDA 122 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180 L T AF++++S + ++ L G +GM GGQ +D +D ++ + Sbjct: 123 LQTLAFQVLASAPVTDMPTRQLGMIGLLAMASGSRGMAGGQAIDLAAVGRQLDLRELEFM 182 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL+ + GA ERL + + G++FQ+ DD+LD E D Sbjct: 183 HIHKTGALIRCSVLLGAQAGTVDGETLERLDRYAKLTGLLFQVVDDILDAEADTA 237 >gi|306844758|ref|ZP_07477343.1| geranyltranstransferase [Brucella sp. BO1] gi|306274930|gb|EFM56700.1| geranyltranstransferase [Brucella sp. BO1] Length = 288 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 111/224 (49%), Positives = 151/224 (67%), Gaps = 3/224 (1%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73 ++ L LL + + RL++A+R+ L GGK++R FLV E A+LF + L Sbjct: 2 EVEAALASLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVL 61 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 RV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYAF+II+S Sbjct: 62 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 121 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCF 191 +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKTGAL+ F Sbjct: 122 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 181 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ACE+GAI+A AS+ ++ER+ FG +G+ FQLADDLLD D Sbjct: 182 ACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAG 225 >gi|239832857|ref|ZP_04681186.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] gi|239825124|gb|EEQ96692.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] Length = 316 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 114/238 (47%), Positives = 155/238 (65%), Gaps = 3/238 (1%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 ++ + L + ++ L LL Q + +RLL+A+R+ L GGK++R FLV Sbjct: 16 LSTDFTAALNLRAMEVEMALTGLLDQRLRTGEIARPERLLAAMRHGVLNGGKRLRPFLVV 75 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E A+LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+A Sbjct: 76 ESAALFGKGGDAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILA 135 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV 177 G+ LLTYAF+I+SS +T L IR +L+ +L GL GM GGQ LD+ E DE + Sbjct: 136 GDSLLTYAFDIVSSDETDLDPAIRVRLVSALARASGLGGMAGGQALDLMAETSKPDEAGI 195 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GAI+A+AS ++ER+ FG +G+ FQLADDLLD D Sbjct: 196 ITLQAMKTGALIRFACEAGAIIANASTEDRERMAEFGSAIGLAFQLADDLLDVTADAE 253 >gi|302380702|ref|ZP_07269167.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3] gi|302311645|gb|EFK93661.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3] Length = 269 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 79/232 (34%), Positives = 120/232 (51%), Gaps = 17/232 (7%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 +E K I+ L DL + ND++ A++Y L+ G K++R L +FN Sbjct: 4 KEIVKLINNSLKDL---------SFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNE 54 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + +IE IH YSL+HDDL MDN RRGK TVH +Y E A++ G+ LL Y+ Sbjct: 55 SISEPMNYALSIELIHNYSLVHDDLECMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYS 114 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 FE++S +K+ + + + G GM+ GQ+LDI D I E + I KT Sbjct: 115 FEVLSES---IKNEVDAMCANYIVKKSGCFGMIRGQLLDI-DSKISEDNIIEIYDKKTCN 170 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237 L+ + S I++ +L + NLG+ FQ+ DD++D E D+ KK Sbjct: 171 LLKASTVSAGILSKVDHTTLLKLENYAFNLGMAFQIIDDIMDYENDIKIEKK 222 >gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays] gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays] Length = 367 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 77/249 (30%), Positives = 129/249 (51%), Gaps = 21/249 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + E + ++ LD A+ + L A+RYALL GGK++R L Sbjct: 65 FDFKAYMGERAVAVNRALD------AAVPAGEPPAALHDAMRYALLAGGKRVRPALCLAA 118 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 ++ A+ AA+E +H SL+HDDLP MD+ +RRGKPT H+ Y E A++AG+ Sbjct: 119 CAVVGGPEPWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGD 178 Query: 122 GLLTYAFEIISSPKTQLKD-------NIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE 170 LL+ +F ++S + D + + L IG +G++ GQ++D++ E Sbjct: 179 ALLSLSFHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSE 238 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + ++ I KT AL+ + GAI+ + + ERLR + ++G++FQ+ DD+LD Sbjct: 239 TVPLERLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDV 298 Query: 231 E---EDLPK 236 E+L K Sbjct: 299 TKSSEELGK 307 >gi|153008460|ref|YP_001369675.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] gi|151560348|gb|ABS13846.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] Length = 304 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 117/238 (49%), Positives = 157/238 (65%), Gaps = 3/238 (1%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 ++ + L + ++ L LL Q + +RLL+A+R+ L GGK++R FLV Sbjct: 4 LSTDFTAILNHRAMEVEMALTGLLDQRLKTGEIARPERLLAAMRHGVLNGGKRLRPFLVV 63 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E A+LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+A Sbjct: 64 ESAALFGKGSDAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILA 123 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV 177 G+GLLTYAF+IISS +T L IR QL+ +L GL GM+GGQ LD+ E DE + Sbjct: 124 GDGLLTYAFDIISSDETDLDAAIRLQLVSALARASGLGGMVGGQALDLMAETSKPDEAGI 183 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GAI+A+AS ++ER+ FG +G+ FQLADDLLD D Sbjct: 184 ITLQAMKTGALIRFACEAGAIIANASSEDRERMAEFGSAIGLAFQLADDLLDVTADAE 241 >gi|153808868|ref|ZP_01961536.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185] gi|149128694|gb|EDM19912.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185] Length = 324 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 15/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L I Y L LGGK+IR L+ +L+ + + Sbjct: 6 QLLDKINNYISEIQFTREPKGLYEPIEYILSLGGKRIRPVLMLMAYNLYREDVASIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AAIE H ++L+HDDL MD +RRGKPTVH +++ TAI++G+ +L AF ++++ + Sbjct: 66 AAIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDAMLILAFRLMTAAPS 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 + + + + GQ LD++ E D E + + ++KT L+ + Sbjct: 124 EHLKEV------MELFGLTTLEICEGQQLDMEFESRDNVTEDEYIEMIRLKTAVLLAGSL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A A+ + E L FG +G+ FQL DDLLD D KK Sbjct: 178 KIGAILAGATAEDAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKK 224 >gi|71898704|ref|ZP_00680873.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1] gi|71731469|gb|EAO33531.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1] Length = 291 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 91/235 (38%), Positives = 131/235 (55%), Gaps = 13/235 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ L ++ +R D+ L+ L + TQ RL +A+RY +L GGK+IR LV Sbjct: 1 MSKALFTR---WCQRTDSYLERTL-----SIPTQAPQRLHAAMRYTVLSGGKRIRPLLVY 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF+V+ AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ Sbjct: 53 AAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILT 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177 G+ L T AFE ++ ++R + +LTH G+ GM GGQ LDI +T + Sbjct: 113 GDALQTLAFECLADAPAD--TSLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKAL 170 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ +K+G LM A GA+ S + L F LG+ FQ+ DD+LD E Sbjct: 171 EVMHALKSGTLMRAAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIES 225 >gi|57641403|ref|YP_183881.1| bifunctional short-chain isoprenyl diphosphate synthase [Thermococcus kodakarensis KOD1] gi|37999032|dbj|BAD00093.1| isoprenyl diphosphate synthase [Thermococcus kodakaraensis] gi|57159727|dbj|BAD85657.1| bifunctional short-chain isoprenyl diphosphate synthase [Thermococcus kodakarensis KOD1] Length = 343 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 122/238 (51%), Gaps = 17/238 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61 L ++++E +K +D ++ +L+ + + L A R Y L GGK++R F+V Sbjct: 5 DELFARIKEKAKDVDRVILELVPE-------KEPLELYKAARHYPLAGGKRVRPFVVLRA 57 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A + AL A++E IH YSL+HDD+ MD +RRG+PTVH + AI+AG+ Sbjct: 58 AEAVGGDPEKALYPAASVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKLWGVNMAILAGD 115 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVF 178 L + AFE I+ + + R +L T N+ + GQ LDI+ E + + Sbjct: 116 LLFSKAFEAIAKAEVPAEKKARILDVLVRTSNL----LCEGQALDIEFETKEEVTVEEYL 171 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL + E GAI+ + L +G N+GI FQ+ DD+LD D K Sbjct: 172 KMISGKTGALFQGSAEIGAIVGTEDEEYIGALSKWGMNVGIAFQIWDDVLDLIADEEK 229 >gi|284048214|ref|YP_003398553.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731] gi|283952435|gb|ADB47238.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731] Length = 291 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 74/235 (31%), Positives = 116/235 (49%), Gaps = 11/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L S L+ ++ L + + A+ Y++ GGK++R L+ A Sbjct: 2 ELRSYLRSRGALVNGYL-------QVRLGVGSISPVDKAMMYSVAAGGKRLRPILLMAAA 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + V A +E IH YSLIHDDLPSMDN RRG+ T H + + A++AG+G Sbjct: 55 DAVGAKGSDFVAVAAGLEMIHTYSLIHDDLPSMDNDDYRRGRLTNHKVFGDAMALLAGDG 114 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180 LLT AFE++ + + + +++ + G GM+GGQ LDI +D+ + Q+ + Sbjct: 115 LLTQAFEVMLEQR-GVDPKVLLEVVRLVAKCAGPTGMVGGQALDITSEDQQLTLEQMKKL 173 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGA+ A GA++ A + F G+ FQ+ DD+LD E D Sbjct: 174 HEAKTGAMFVAAVRGGAMLGGADPETLRIMTHFANLFGLAFQITDDILDVEGDAK 228 >gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1] gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1] Length = 324 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 123/236 (52%), Gaps = 11/236 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 +QE R + L + A L A+RYA+L GGK++R LV A Sbjct: 32 DFSVWMQERLVRTEEALSRWVGINA-------PAGLGEAMRYAVLDGGKRLRPLLVWAAA 84 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LR G A+E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E +A++AG+ Sbjct: 85 EAVGGQAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDA 144 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180 L AFE++ + +++++L L G GM GGQ +D+ + + ETQ+ + Sbjct: 145 LQALAFELLLPEDDGIPCSMQARLCRLLGAAAGSHGMAGGQAIDLASVGKQLSETQLREM 204 Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++KTGAL+ + GA A L +G+ LG+ FQ+ DD+LD D Sbjct: 205 HRLKTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSA 260 >gi|327398343|ref|YP_004339212.1| Farnesyltranstransferase [Hippea maritima DSM 10411] gi|327180972|gb|AEA33153.1| Farnesyltranstransferase [Hippea maritima DSM 10411] Length = 291 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 119/237 (50%), Gaps = 15/237 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLF 65 SKL + +D +++L + A+ Y GGK+IR+ LV A +F Sbjct: 3 SKLSHYKELVDNFINEL------AQIKRFPPIFQEALFYTPKSGGKRIRAMLVMCAADMF 56 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +L + +AIE +H YSLIHDDLP MDN RRGKP H Y E A++ G+GL T Sbjct: 57 GADETKSLHIASAIELMHAYSLIHDDLPVMDNDDFRRGKPANHKVYGEDLALLVGDGLNT 116 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ------VFM 179 Y F +I+ + D + +++ L++N G+ GM+ GQ++D+ V Sbjct: 117 YTFNVIADA--PIDDARKVKIVKWLSNNAGIGGMVVGQVVDVLSSRDRLKGHSHKKLVNF 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I K KT L+ + GAI + + +RL +G G+ FQ+ DD LD D K Sbjct: 175 IHKHKTAKLIQASVVCGAICGNPDDVQLDRLAKYGLYAGVAFQIIDDYLDVVGDEEK 231 >gi|333029215|ref|ZP_08457276.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011] gi|332739812|gb|EGJ70294.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011] Length = 324 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 13/209 (6%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + + L I Y L +GGK+IR L+ L+ + L AIE H ++L+HD Sbjct: 20 EKKDPKNLYEPIHYVLSIGGKRIRPILMLLAYQLYKDDLEKTLPAACAIEVYHNFTLLHD 79 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DL MD +RR KPTVH ++ TAI++G+ +L ++ +++ + + ++ Sbjct: 80 DL--MDKSDLRRNKPTVHNVWNANTAILSGDAMLILSYHLLAKAPQENLSAVLNEF---- 133 Query: 151 THNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 N + GQ DI+ E + + ++KT L+ + + GAI+A AS + Sbjct: 134 --NKVTLEICEGQQYDIEFETKNSVKAEDYLDMIRLKTAVLLASSIKMGAIIAGASDEDT 191 Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L FG N+G+ FQL DD LD D PK Sbjct: 192 NLLYDFGLNVGLAFQLQDDYLDVYGD-PK 219 >gi|289192774|ref|YP_003458715.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22] gi|288939224|gb|ADC69979.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22] Length = 317 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 80/230 (34%), Positives = 125/230 (54%), Gaps = 19/230 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 + ++ID L + + ND+L +A ++ L GGK+IR +L L N Sbjct: 5 KNILQKIDEELKTYVDK---------NDKLYNASKHLLFAGGKRIRPYLTVVTYMLKKDN 55 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L AA+E IH Y+LIHDD+ MDN RRGKPTVH+ Y E AI+AG+ L AF Sbjct: 56 IREVLPAAAAVELIHNYTLIHDDI--MDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAF 113 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186 E +S +KDN ++ +L + + + GQ +D++ E + + + + KTG Sbjct: 114 EAVSR----IKDNKKAHEVLKILSKACV-EVCEGQAMDMEFENYYPTMEEYLEMIRKKTG 168 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 AL+ + E GA+MA ++ E+E L+ + + +G+ FQ+ DD+LD D K Sbjct: 169 ALLEASVEIGAVMADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKK 218 >gi|327191787|gb|EGE58789.1| geranyltranstransferase protein [Rhizobium etli CNPAF512] Length = 387 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 117/236 (49%), Positives = 167/236 (70%), Gaps = 3/236 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++L+ N++ I+ +LD LLL A + + L A+ YA+L GGK++R FLV E Sbjct: 89 DTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPFLVVES 148 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+L + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVH+++DE TAI+AG+ Sbjct: 149 AALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATAILAGD 208 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179 LLTYAF+I+++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + Sbjct: 209 SLLTYAFDIVAAPETALPDTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 268 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD D Sbjct: 269 LQAMKTGALIRFACEAGAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDAA 324 >gi|146304882|ref|YP_001192198.1| geranyltranstransferase [Metallosphaera sedula DSM 5348] gi|145703132|gb|ABP96274.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Metallosphaera sedula DSM 5348] Length = 327 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 16/236 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L +E +++ +D L H T+ L A RY + GGK++R +V + Sbjct: 2 DLDQYFEEIVAKVNATMDSFL-----HGDTRE---LYEASRYLISAGGKRLRPLVVVLSS 53 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L A+ GAA+E +H ++LIHDD+ MD RRG PTVH+++ TAI+AG+ Sbjct: 54 DLLGGERHRAILAGAAVEVLHNFTLIHDDI--MDQDTTRRGIPTVHVKWGIPTAILAGDL 111 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFM 179 L AF+I++ L ++ +++ + ++ + + GQ +D++ E I E Sbjct: 112 LHAKAFQILTESIKGLSGDVAYKVLDCFSRSVIV--VSEGQAMDMEFEKRWDIREKDYLE 169 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + KT L + G ++A S+ E L FGE +GI FQ+ DD+L D Sbjct: 170 MIRRKTAQLFACSAYLGGVLAGGSEEEVNNLYEFGEKMGIAFQIVDDILGITADEK 225 >gi|330445276|ref|ZP_08308928.1| geranyltranstransferase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489467|dbj|GAA03425.1| geranyltranstransferase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 300 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 123/229 (53%), Gaps = 10/229 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70 +R + +L + L Q + L+ A++Y LLGGK+ R FL + V Sbjct: 14 YQQRSNDVLANWLA-----TQPFADKALIKAMQYGTLLGGKRARPFLTYVTGEMLGVTQD 68 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI +DE TAI+AG+ L T AFEI Sbjct: 69 DLDTPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIAFDEATAILAGDALQTLAFEI 128 Query: 131 ISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGA 187 +++ + N R ++ L G GM GQ LD++ E + Q+ +I + KTGA Sbjct: 129 LANGQLSQDGNTQRIAMVSELAKASGAAGMCLGQTLDLEAEGKHVGLEQLELIHRHKTGA 188 Query: 188 LMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ A GA+ A +L + E +G+ FQ+ DD+LD D Sbjct: 189 LIRCAVRLGALAAGEKGIAILPQLDKYAEAIGLAFQVQDDILDVISDTE 237 >gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata] gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata] Length = 329 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 33/244 (13%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + + ++ LD S + + ++ A+RY+LL GGK++R L Sbjct: 49 FDFMSYMIGKANSVNKALD-------SAVSLREPIKIHEAMRYSLLAGGKRVRPVLCIAA 101 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L AL A+E IH SLIHDDLP + E A++AG+ Sbjct: 102 CELVGGEEFLALPAACAVEMIHTMSLIHDDLPF----------------FGEDVAVLAGD 145 Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---- 176 LL++AFE +++ ++ R + + L IG +G++ GQ++D+ E +D+ Sbjct: 146 ALLSFAFEHLATETPEIISPARVVRAIGELAKAIGSEGLVAGQVVDLTSEGMDQNDVGLE 205 Query: 177 -VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 + I KT L+ A GAI + E ERLR F +G++FQ+ DD+LD E Sbjct: 206 LLEFIHLHKTAVLLEAATVLGAIFGGGTNEEIERLRKFARCIGLLFQVVDDILDVTKSSE 265 Query: 233 DLPK 236 +L K Sbjct: 266 ELGK 269 >gi|259909275|ref|YP_002649631.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96] gi|224964897|emb|CAX56420.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96] gi|283479330|emb|CAY75246.1| geranyltranstransferase [Erwinia pyrifoliae DSM 12163] Length = 299 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 86/232 (37%), Positives = 123/232 (53%), Gaps = 10/232 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67 L + +R++ L + Q + L++A+ Y ALLGGK++R FLV + Sbjct: 7 LTSHYQRVNAALQGFISQL-----PFQSTPLVNAMEYGALLGGKRLRPFLVYATGDMLRA 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N AAIECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG+ L T A Sbjct: 62 NDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEEAAILAGDALQTLA 121 Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 F I++ P + R ++ L G+ GM GGQ LD+ E + ++ I + K Sbjct: 122 FSILADAPMPGVVAESRIAMLSELAQASGVAGMCGGQALDLAAEGKQVTLNELEQIHRHK 181 Query: 185 TGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 TGAL+ A GA+ A + L F +G+ FQ+ DD+LD D Sbjct: 182 TGALIRSAVRLGALTAGERGRAALPALDRFANAIGLAFQVQDDILDVTGDTE 233 >gi|118591313|ref|ZP_01548711.1| geranyltranstransferase [Stappia aggregata IAM 12614] gi|118435985|gb|EAV42628.1| geranyltranstransferase [Stappia aggregata IAM 12614] Length = 301 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 104/235 (44%), Positives = 144/235 (61%), Gaps = 3/235 (1%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L +K ++ L+ LL A + RLL+A+R+ AL GGK++R LV Sbjct: 1 MTLDPNQHLTFQAKFVEATLETLLADQALPGEQVRPPRLLAAMRHGALNGGKRLRPVLVM 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E A+LF L+ A+E +HCYSL+HDDLP+MD+ +RRG+PTVH YDE TAI+A Sbjct: 61 ETANLFGRADDGVLQAACALELVHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDEATAILA 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLT AF++I+ +R +L L G GM GGQMLD++ E E ++ Sbjct: 121 GDALLTLAFDVITGEAVHADAAVRLRLSRELARASGFGGMAGGQMLDLESEHRERTEAEI 180 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q MKTGAL+ +AC +GAI+A A + + +RL FGE +G+ FQLADDLLD E Sbjct: 181 RQLQSMKTGALLRYACRAGAILADAPEADIDRLTRFGEVIGLAFQLADDLLDVEA 235 >gi|253995978|ref|YP_003048042.1| polyprenyl synthetase [Methylotenera mobilis JLW8] gi|253982657|gb|ACT47515.1| Polyprenyl synthetase [Methylotenera mobilis JLW8] Length = 303 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 130/240 (54%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRS 55 M G+ + + I+ +LD+ L +T L A+RY+LLGG K++R+ Sbjct: 6 MTDGVATDFLVWAKAKQGHIEIVLDEALPS-----ETTAPQVLHDAMRYSLLGGGKRVRA 60 Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115 L A L N A A+E IH YSL+HDD+P MDN +RRGKP+ H QYD+ T Sbjct: 61 LLCYAAAELCATNATIADAAACAVEMIHAYSLVHDDMPCMDNDDLRRGKPSCHKQYDDAT 120 Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFID 173 A++ G+ L + AF+++S+P N + ++ L G GM GGQ +D+ + + Sbjct: 121 ALLVGDALQSLAFDVLSTPTLCESANQQISMLNILAKASGSLGMAGGQAIDLASVGKALS 180 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++ + K+KTGAL+ A GA + + + + + E++G+ FQ+ DD+LD E D Sbjct: 181 QHELENMHKLKTGALIQAAALLGA--SSGTAEQMSAVIVYAEHIGLAFQVVDDILDVEAD 238 >gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032] gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032] Length = 298 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 90/236 (38%), Positives = 139/236 (58%), Gaps = 12/236 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + + L + +R++ L L+L+ A + + ++RY+L GGK+IR L A Sbjct: 2 EIATYLNDQRQRVEDQLAALMLKPAGDFS-----QHIESMRYSLFVGGKRIRPILCLAGA 56 Query: 63 SLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AL V A+ECIH YSLIHDDLP+MD+ +RRGKPT H + E AI+A Sbjct: 57 EAVDSGEATRQRALSVACALECIHTYSLIHDDLPAMDDDDLRRGKPTNHTVFGEAAAILA 116 Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLT+AF+++SS + D R +++ ++ G GM+GGQ LD+ E + Sbjct: 117 GDGLLTFAFDLLSSQASADINDAARIRIIQTIARAAGPLGMVGGQSLDMIYEGQQVGYEM 176 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I + KTGAL+ + SGA++A AS ++ L+ +G+N+G+ FQ+ DDLLD E Sbjct: 177 LRTIHRSKTGALITASVLSGAMVAGASAEQETALKTYGDNIGLAFQIVDDLLDVEA 232 >gi|189024858|ref|YP_001935626.1| polyprenyl synthetase [Brucella abortus S19] gi|189020430|gb|ACD73152.1| Polyprenyl synthetase [Brucella abortus S19] Length = 288 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 112/224 (50%), Positives = 150/224 (66%), Gaps = 3/224 (1%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73 ++ L LL + + RL++A+R+ L GGK++R FLV E A+LF L Sbjct: 2 EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVL 61 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 RV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYAF+II+S Sbjct: 62 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 121 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCF 191 +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKTGAL+ F Sbjct: 122 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 181 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D Sbjct: 182 ACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 225 >gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays] gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays] Length = 361 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 21/249 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + ++E + ++ LD A+ L A+RYALL GGK++R L Sbjct: 59 FNFKAYMEERAVAVNRALD------AAIPAGGLPAALHDAMRYALLAGGKRVRPALCLAA 112 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 ++ A+ AA+E +H SL+HDDLP MD+ +RRGKPT H+ Y E A++AG+ Sbjct: 113 CAVVGGPESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGD 172 Query: 122 GLLTYAFEIISSPKTQLK-------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE 170 LL+ +F ++S + + + L IG +G++ GQ++D++ + Sbjct: 173 ALLSLSFHHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQ 232 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + + I KT AL+ + GAI+ + + E LR + ++G++FQ+ DD+LD Sbjct: 233 TVPLELLEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDV 292 Query: 231 E---EDLPK 236 E+L K Sbjct: 293 TKSSEELGK 301 >gi|227544389|ref|ZP_03974438.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A] gi|300909750|ref|ZP_07127211.1| geranyltranstransferase [Lactobacillus reuteri SD2112] gi|227185652|gb|EEI65723.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A] gi|300893615|gb|EFK86974.1| geranyltranstransferase [Lactobacillus reuteri SD2112] Length = 290 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 128/224 (57%), Gaps = 11/224 (4%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVGA 77 ++D L ++ + Q L S++ Y+L+ GGK++R L + + LR + Sbjct: 12 IEDYLSKSLATDIDQA--TLESSMSYSLMAGGKRLRPALTLTTIEMLGGTLNDDLLRAAS 69 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E +H YSLIHDDLP+MDN +RRGKPT H ++ A +AG+GLLT AF+ ++ Sbjct: 70 ALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVAD--NH 127 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACES 195 L N+RSQL L L G GM+ GQ DI+ E ++ Q+ + + KTG L+ +A + Sbjct: 128 LPANVRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLNLNQLKYLHRQKTGELIRYAVLA 187 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 G IM S K+ L FGEN G+ FQ+ DDL+D E++ K Sbjct: 188 GGIMMDQSAEIKQELAAFGENYGLAFQIYDDLMDVLSTTEEMGK 231 >gi|332531501|ref|ZP_08407403.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624] gi|332039053|gb|EGI75477.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624] Length = 313 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 81/237 (34%), Positives = 130/237 (54%), Gaps = 9/237 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTEC 61 + + + E R++ L + + + +H D +L A+RYA+L GGK++R LV Sbjct: 8 SMRAWMDERLTRVEHALQEWVGVD----EPEHLDVVLGLAMRYAVLDGGKRLRPLLVLAA 63 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 ALR A E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E A++AG+ Sbjct: 64 CEAVRGEADAALRAACATELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEAQALLAGD 123 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L AFE+++ + + ++++L L G GM GGQ +D+ +DE ++ Sbjct: 124 ALQALAFELLTPDDEVAVPVGMQARLCRLLARAAGSSGMAGGQAIDLASVGVKLDEERLR 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + ++KTGAL+ + GA H +Q ++ L +G +G+ FQ+ DD+LD D Sbjct: 184 QMHRLKTGALLQASVMMGAACGHPTQAQQAALSDYGAAIGLAFQVVDDILDVTADSA 240 >gi|294054659|ref|YP_003548317.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221] gi|293613992|gb|ADE54147.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221] Length = 294 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 82/235 (34%), Positives = 128/235 (54%), Gaps = 10/235 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M +KL + +R++T +D LL +H RL A+RY++ GGK++R LV Sbjct: 1 MEASFKAKLSQYQQRVETGIDTLLPSEDTH-----PVRLHRAMRYSMEAGGKRLRPVLVL 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + L + + + AIEC+H Y+LIHDDLPS+DN +RRG+P+ H Q+DE TA++A Sbjct: 56 ALSELAD-SGQDPIAAAVAIECLHTYTLIHDDLPSLDNSDLRRGRPSCHKQFDEPTAVLA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLT+AFE++S + L+ L G + ++GGQ DI +E +D + Sbjct: 115 GDALLTFAFELLSREYAS-SPELAVGLIQDLADASGSRRLIGGQQEDIDNEGKPVDADTL 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I + KT AL+ A G + ++ G +LG+ FQ+ DD+LD Sbjct: 174 QYIHENKTAALLTAALSMGLRFTQPGAQALQLIQKVGFHLGMTFQIVDDILDATS 228 >gi|257865770|ref|ZP_05645423.1| geranyltranstransferase [Enterococcus casseliflavus EC30] gi|257872105|ref|ZP_05651758.1| geranyltranstransferase [Enterococcus casseliflavus EC10] gi|257799704|gb|EEV28756.1| geranyltranstransferase [Enterococcus casseliflavus EC30] gi|257806269|gb|EEV35091.1| geranyltranstransferase [Enterococcus casseliflavus EC10] Length = 295 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 84/239 (35%), Positives = 140/239 (58%), Gaps = 15/239 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 + +E++ I+ +++ + + S + RL +++Y++ GGK+IR L+ + Sbjct: 1 MKEFTKEHAPLIEEVMERFVKEHTS------DRRLFESMQYSIQAGGKRIRPLLLAATVA 54 Query: 64 LFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F+ TA+ + AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+G Sbjct: 55 AFHKPINTAVYQCAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDG 114 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LLT AF++++ +++ N + L+ L+ G QGM+ GQ DIQ E + ++ I Sbjct: 115 LLTAAFQLVAMA--EIEANQKVLLLQQLSKAAGTQGMVAGQAADIQGENQALRLEELMSI 172 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + KTG L+ FA +G ++A ++ L F +++G+ FQ+ DDLLD E+L K Sbjct: 173 HERKTGELIRFAVIAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGK 231 >gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis thaliana] Length = 360 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 123/244 (50%), Gaps = 17/244 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + ++ ++ LD + + + A+RY+LL GGK++R L Sbjct: 64 FDFKLYMIRKAESVNAALD-------VSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 116 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+ Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176 Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL AFE ++ + L R + ++ L IG G++ GQM+D+ E ++ Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLE 236 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 + I KT AL+ A G IM ++ E E+LR + +G++FQ+ DD+ D E Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIPDVTKSTE 296 Query: 233 DLPK 236 +L K Sbjct: 297 ELGK 300 >gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] Length = 360 Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 17/244 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + ++ + L+ + Q + A+RY+LL GGK++R L Sbjct: 64 FDFKSYMIRKAESVSMALN-------VSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAA 116 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SLIHDDLP MD+ +RRGKPT H + E A++AG+ Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGD 176 Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL AFE ++ + L R + + L IG +G++ GQ+ D+ + ++ Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLE 236 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 ++ I KT AL+ A GAI+ ++ E ++LR +G +G++FQ+ DD++D E Sbjct: 237 RLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTE 296 Query: 233 DLPK 236 +L K Sbjct: 297 ELGK 300 >gi|212703021|ref|ZP_03311149.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098] gi|212673609|gb|EEB34092.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098] Length = 298 Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 12/238 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 + S L+E K +++ L L + RL ++ Y+L GGK++R L Sbjct: 5 TEAMKSLLKERGKLVESYLATCLD------GQEMPPRLRESMLYSLQAGGKRLRPVLCLS 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 CA+L + L +AIE +H YSLIHDDLP+MD+ +RRGKP+ H +DE TAI+AG Sbjct: 59 CAALCGLKAEDVLPFASAIEMVHTYSLIHDDLPAMDDDDLRRGKPSNHKAFDEATAILAG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQV 177 + LLT AF + + +L + M G GM+GGQ D+ + ++ Sbjct: 119 DALLTDAFAHM--CRVELPAGQVLRAMAEFARAAGSSGMVGGQEWDMLYTGLPPVSMAEL 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + MKTGAL+ +C GA++A A+ + ER+ +G LG+ FQ+ADD+LD D Sbjct: 177 RRMHAMKTGALLRASCVCGALLAGAADDVCERIGRYGAALGVAFQIADDILDVVSDTA 234 >gi|299783413|gb|ADJ41411.1| Geranyltranstransferase [Lactobacillus fermentum CECT 5716] Length = 311 Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 124/229 (54%), Gaps = 10/229 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECASLFN 66 + + + ++DD L A+H+ + LL ++ Y+LL GGK++R L A L Sbjct: 1 MARQLQELVAVVDDYL---ATHLAGACDQPLLEKSMAYSLLAGGKRLRPTLTIAVAELLG 57 Query: 67 VN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 +R A+E IH YSLIHDDLP+MDN +RRGKPT H Y A +AG+GLLT Sbjct: 58 KTIDDDLVRAACALELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVYGPGVATLAGDGLLT 117 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM 183 AFE +S QLK +R +L+ L G GM+ GQ D+ + + Q+ + + Sbjct: 118 LAFEWVSD--NQLKAPVRLRLVQELAKAAGPAGMVAGQATDVSATGQELSLAQLKKLHRQ 175 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTGAL+ +A +G ++A + L FGE G+ FQ+ DD+LD Sbjct: 176 KTGALLRYAVLAGGLIAEQETAVLDCLTTFGEAYGLAFQIYDDILDVTA 224 >gi|323137013|ref|ZP_08072093.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242] gi|322397774|gb|EFY00296.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242] Length = 310 Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 108/243 (44%), Positives = 152/243 (62%), Gaps = 8/243 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 +L + ++ + LD LL + RLL A+RY +L GGK++R FLV E Sbjct: 8 EEFRRRLDQAAEATEAALDSLLAPAPLADEITRPARLLEAMRYVSLGGGKRLRPFLVIES 67 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A LF V +ALR A+E IHCYSL HDDLP+MD+ +RRG+PT H +DE TAI+AG+ Sbjct: 68 ARLFGVEGASALRTACALEMIHCYSLAHDDLPAMDDDDLRRGRPTAHKAFDEATAILAGD 127 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQV 177 GLLTYAF++++ P T ++R L+L+L GL GM+GGQ LD+ E + + + Sbjct: 128 GLLTYAFDVVADPATHPDASLRVSLVLALARAAGLGGMVGGQALDLAAETAATPLSQAET 187 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234 +Q MKTGAL+ FA ++G I+ A+ +K+ LR +GE LG FQ+ADD+LD E D L Sbjct: 188 MQMQAMKTGALLRFAVDAGGILGGAAPAQKKALRRYGEALGAAFQIADDILDAEGDTAAL 247 Query: 235 PKK 237 K+ Sbjct: 248 GKR 250 >gi|319792406|ref|YP_004154046.1| polyprenyl synthetase [Variovorax paradoxus EPS] gi|315594869|gb|ADU35935.1| Polyprenyl synthetase [Variovorax paradoxus EPS] Length = 304 Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 87/240 (36%), Positives = 129/240 (53%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSK----RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55 M P++L S+ R++ L + + L A+RYA+L GGK++R Sbjct: 6 MTDWTPARLAGWSEPHLMRVEAALSR-------WVGVEAPVLLGDAMRYAVLDGGKRLRP 58 Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115 LV + N ALR A E IH YSL+HDDLP MDN +RRGKPTVH+++ E Sbjct: 59 LLVLAASEAVGGNEAAALRAACAAELIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEAD 118 Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--D 173 A++AG+ L AFE+++ ++ ++ L L G QGM GGQ +D+ I + Sbjct: 119 ALLAGDALQALAFELLAPEGDEIPAATQATLCRLLARAAGSQGMAGGQAIDLASVGIALN 178 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ETQ+ + ++KTGAL+ + E GA + S LR +G +G+ FQ+ DD+LD D Sbjct: 179 ETQLREMHRLKTGALLQGSVEMGAACGNVSAAALAALRDYGAAIGLAFQVVDDILDVTAD 238 >gi|294782565|ref|ZP_06747891.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA] gi|294481206|gb|EFG28981.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA] Length = 298 Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 82/243 (33%), Positives = 125/243 (51%), Gaps = 13/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN L+E + + + + + + YALL GGK++R FL+ Sbjct: 1 MNSDFKVYLKEKTNFF------ETELKKELEELSYPETIAKGMEYALLNGGKRLRPFLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N + ++ +E IH YSL+HDDLP++DN RRGK T H + E AI+ Sbjct: 55 TTLELLNQDIQKGVKSAIGVEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILI 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176 G+ LLTYAF ++S + + ++S T G+ GM+GGQM+DI+ E I+ Sbjct: 115 GDALLTYAFYMLSEKNLNILSFEQITNIISKTSAYSGINGMIGGQMIDIESENKKINLET 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + I K KTG L+ E I+A S++++ L + E +G+ FQ+ DD+LD E D Sbjct: 175 LKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFED 234 Query: 234 LPK 236 L K Sbjct: 235 LGK 237 >gi|20089495|ref|NP_615570.1| bifunctional short chain isoprenyl diphosphate synthase [Methanosarcina acetivorans C2A] gi|19914402|gb|AAM04050.1| bifunctional short chain isoprenyl diphosphate synthase [Methanosarcina acetivorans C2A] Length = 324 Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 73/236 (30%), Positives = 118/236 (50%), Gaps = 17/236 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L ++++ S +D +++LL H + L A RY + GGK++R ++ Sbjct: 2 MLMMLIDEIKKRSSHVDAAINELL-------PVTHPEELYKASRYLVDAGGKRLRPAVLI 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + + L A+E +H ++LIHDD+ MD IRRG P VH+++ E AI+A Sbjct: 55 LAAEAVGSDLKSVLPAAVAVELVHNFTLIHDDI--MDKDNIRRGMPAVHVKWGEAGAILA 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQ 176 G+ L + AFEI+S + ++ +LS T + GQ LD+ E + E + Sbjct: 113 GDTLYSKAFEILSKVENDPVRILKCMDVLSKT----CTEICEGQWLDMDFEKRDRVTELE 168 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + KT L A + GA++ AS E L +G +GI FQ+ DD+LD Sbjct: 169 YLEMVEKKTSVLYAAAAKIGALLGGASDEVAESLSEYGRLIGIGFQMYDDVLDMVA 224 >gi|90410905|ref|ZP_01218919.1| putative geranyltranstransferase [Photobacterium profundum 3TCK] gi|90328118|gb|EAS44429.1| putative geranyltranstransferase [Photobacterium profundum 3TCK] Length = 300 Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 86/239 (35%), Positives = 119/239 (49%), Gaps = 10/239 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 N L L+ R + L L Q + L+ ++Y LLGGK+ R FL Sbjct: 4 NLTLSQSLKHYQDRSNQHLAQWL-----EAQPFADQALVKTMKYGTLLGGKRARPFLTYI 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + AA+ECIH YSLIHDDLP+MD+ +RRG PT HI +DE AI+AG Sbjct: 59 TGQMLGAECADLDTPAAAVECIHAYSLIHDDLPAMDDDELRRGHPTCHIAFDEALAILAG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 + L T AFEI++ + N R ++ L G GM GQ LD++ E +D ++ Sbjct: 119 DALQTLAFEILADGQLSDDGNTQRIAMIKELAQASGAAGMCVGQALDLEAEGKRVDLQKL 178 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I K KTGAL+ A GA+ A +L F + +G+ FQ+ DD+LD D Sbjct: 179 EAIHKHKTGALIRCAVRLGALAAGQKGVAVLPQLNQFADAIGLAFQVQDDILDVTSDTE 237 >gi|218264432|ref|ZP_03478283.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii DSM 18315] gi|218222005|gb|EEC94655.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii DSM 18315] Length = 324 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 12/224 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + IL + + T L I Y L LGGK+IR LV +L+ N A++ Sbjct: 4 FNDILQKIEQEITRLQFTYPPKSLYEPIEYILSLGGKRIRPALVLMACNLYKENVDIAIK 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +E H ++L+HDDL MD RR KPTVH +++ TAI++G+ +L A+++I Sbjct: 64 PALGLEVFHNFTLLHDDL--MDEADKRRNKPTVHKVWNDNTAILSGDAMLIAAYQLIGET 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191 K++ I + + GGQ D++ E + E + + ++KT L+ Sbjct: 122 KSESLKEILDLFTRT------ALEICGGQQYDMEFESRTDVTEAEYIEMIRLKTAVLLAC 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A + GAIM +A + + E L FG N+G+ FQL DDLLD D Sbjct: 176 ALKMGAIMGNAPEADAEALYQFGINIGLAFQLQDDLLDVYGDTA 219 >gi|1303919|dbj|BAA12575.1| YqiD [Bacillus subtilis] Length = 272 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 135/240 (56%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L S L + K I+ L + + D L ++ Y+L GGK++R +V Sbjct: 1 MTNKLTSFLADRKKTIENQL------SVYTEKLDMPDSLKKSMLYSLQAGGKRLRPLIVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H + E TA++A Sbjct: 55 AVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLA 114 Query: 120 GNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 G+GLLT +F++I+S + ++ R +L+ L G +GM+GGQ+ D++ + + + Sbjct: 115 GDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAGNRQVTLEE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I + KT L+ F +GAI+A A + + E LR F ++GI FQ+ DD+LD E K Sbjct: 175 LESIHERKTSKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEK 234 >gi|108759145|ref|YP_632810.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622] gi|108463025|gb|ABF88210.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622] Length = 297 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 125/236 (52%), Gaps = 12/236 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L S L R++ +L++ + + + +L A+RY+LL GGK++R L Sbjct: 3 TFQLNSFLAAQQARVEALLNERVARLG---PSGTPPQLAEAMRYSLLAGGKRLRPVLCLA 59 Query: 61 CASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 A L + A A+E +H YSL+HDDLP+MDN RRG+ T H Y E AI Sbjct: 60 FADLVARGSAVSAVAGDAACALEYVHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAMAI 119 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQ 176 +AG+ LLT AF +++S +++R+ L L G GM+GGQ+LD +D Sbjct: 120 LAGDALLTEAFTLVASG----PESMRAALCRELAVASGAAGMVGGQVLDTAEDRPSALDY 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + +MKTGAL+ AC G + + + R +G+ +G+ FQ+ADD+LD Sbjct: 176 LIRMHRMKTGALIRAACRMGVLASGGDADALARADTYGDAVGLAFQIADDVLDVTA 231 >gi|15232010|ref|NP_189747.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75263903|sp|Q9LHR4|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12, chloroplastic; Short=GGPP synthase 12; Short=GGPS12; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12; AltName: Full=Dimethylallyltranstransferase 12; AltName: Full=Farnesyl diphosphate synthase 12; AltName: Full=Farnesyltranstransferase 12; AltName: Full=Geranyltranstransferase 12; Flags: Precursor gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana] gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana] Length = 360 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 17/244 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + ++ + L+ + Q + A+RY+LL GGK++R L Sbjct: 64 FDFKSYMIRKAESVSMALN-------VSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAA 116 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SLIHDDLP MD+ +RRGKPT H + E A++AG+ Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGD 176 Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL AFE ++ + L R + + L IG +G++ GQ+ D+ + ++ Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLE 236 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 ++ I KT AL+ A GAI+ ++ E ++LR +G +G++FQ+ DD++D E Sbjct: 237 RLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTE 296 Query: 233 DLPK 236 +L K Sbjct: 297 ELGK 300 >gi|157376460|ref|YP_001475060.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3] gi|157318834|gb|ABV37932.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3] Length = 293 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 89/238 (37%), Positives = 135/238 (56%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L + + +R+D + ++ A+ + +L +A+++ AL+GGK+IR FLV Sbjct: 2 LARAISQYQQRVDEQIKSIIDSQAT-----TDLKLQAAMKHGALIGGKRIRPFLVYAIGD 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + NV AAIEC+H YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MLNVAPEKLDACAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 AFE I P + + ++ +L G GM GGQ +D+ D+ ID + + Sbjct: 117 QALAFESICEPINGITPSQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTKLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 ++KTGAL+ A E I A + E+ L F + +G+ FQ+ DD+LD E+L K Sbjct: 177 RLKTGALIRCAVELPMIAAAVTVEEQNLLMDFADAIGLAFQVQDDVLDIIASTEELGK 234 >gi|295099642|emb|CBK88731.1| Geranylgeranyl pyrophosphate synthase [Eubacterium cylindroides T2-87] Length = 282 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 124/232 (53%), Gaps = 17/232 (7%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 S +T L + +L+ R A+ Y+L+ GGK++R L+ + ++ Sbjct: 3 QSNEFETYLKETVLEKL-------PSRTKEAMCYSLMNGGKRVRPQLLFAALQHYGMDPK 55 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 AIE IH YSLIHDDLP+MDN RRGKP+ H YDE AI+AG+GLLT AFE+ Sbjct: 56 DGFACACAIEMIHTYSLIHDDLPAMDNDDFRRGKPSCHKAYDEACAILAGDGLLTKAFEV 115 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGA 187 + +T D + +L+ +L+ G+ GM+ GQ LDIQ D + I + KT Sbjct: 116 V--LRTPCSDTNKVKLVEALSSYSGIDGMIYGQELDIQSENDPHATLDTLLKIDEYKTAK 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 L+ AI+A+ + E ++ G +LG+ FQ+ DD+LD E+L K Sbjct: 174 LLTLPLVCAAIIAN-KHEDIEIMKKIGYDLGVQFQIQDDILDVTKTSEELGK 224 >gi|15231877|ref|NP_188071.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75274215|sp|Q9LUE1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9, chloroplastic; Short=GGPP synthase 9; Short=GGPS9; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9; AltName: Full=Dimethylallyltranstransferase 9; AltName: Full=Farnesyl diphosphate synthase 9; AltName: Full=Farnesyltranstransferase 9; AltName: Full=Geranyltranstransferase 9; Flags: Precursor gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana] gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana] Length = 360 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 122/244 (50%), Gaps = 17/244 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + ++ ++ LD + + A+RY+LL GGK++R L Sbjct: 64 FDFKLYMIRKAESVNAALD-------VSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAA 116 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+ Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176 Query: 122 GLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL AFE ++ + L + ++ L IG G++ GQM+D+ E ++ Sbjct: 177 ALLALAFEHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLE 236 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 + I KT AL+ A G IM ++ E E+LR + +G++FQ+ DD+LD E Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296 Query: 233 DLPK 236 +L K Sbjct: 297 ELGK 300 >gi|225432262|ref|XP_002275812.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 361 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 16/244 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + + E +K ++ LD + + + + A+RY+LL GGK+I + Sbjct: 65 DFNFKAYMLEKAKSVNQALD-------TAIPLREPLEIHKAMRYSLLDGGKRIHPIVCIS 117 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L TA+ V A+E +H SL+ DDLP MDN IRRGKP+ H + E I+A Sbjct: 118 ACELVGGQESTAMPVVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGESVTILAV 177 Query: 121 NGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---T 175 + LL AFE +++ T + + + L +IG QG++ GQ LD+ E E Sbjct: 178 DALLALAFEHVATMSTVGVVPPMVTVHAIQELARSIGSQGLVAGQFLDLSSEGSPEIGLE 237 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232 + I K G L+ + GA++ S + E LR FG +G+++Q+ DD+LD + Sbjct: 238 GLESIHINKAGPLLEASAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQ 297 Query: 233 DLPK 236 +L K Sbjct: 298 ELGK 301 >gi|224476632|ref|YP_002634238.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421239|emb|CAL28053.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus TM300] Length = 292 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 86/221 (38%), Positives = 124/221 (56%), Gaps = 8/221 (3%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLTALRVG 76 +++LLLQ+ N L ++RY+L GGK+IR L+ E + N ++ L+ Sbjct: 9 INELLLQSIPLSPLDTN--LEESMRYSLEAGGKRIRPLLLIETLKMLSNNSDYSKGLQTA 66 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E +H YSLIHDDLP+MDN RRGK T H Y E A++AG+ LLT AF +IS+ + Sbjct: 67 LALEMVHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKALLAGDALLTKAFHLIST-DS 125 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 L R +L+ L+ G GM+GGQ LD++ E I + I K KTGAL+ +A Sbjct: 126 LLDAEARIKLVEGLSDASGHLGMIGGQTLDMESENKQIPLETLQQIHKEKTGALLTYAIM 185 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + + L + E+LG+IFQ+ DDLLD D Sbjct: 186 AAVTIVKPPNEISDILNNYSEHLGLIFQIKDDLLDVYGDEK 226 >gi|292898693|ref|YP_003538062.1| geranyltranstransferase [Erwinia amylovora ATCC 49946] gi|291198541|emb|CBJ45649.1| geranyltranstransferase [Erwinia amylovora ATCC 49946] gi|312171554|emb|CBX79812.1| geranyltranstransferase [Erwinia amylovora ATCC BAA-2158] Length = 299 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 10/227 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA 72 +R++ L + Q + L++A+ Y ALLGGK++R FLV + + Sbjct: 12 QRVNAALQGFISQL-----PFQSSPLVNAMEYGALLGGKRLRPFLVYATGDMLRADDAAL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AAIECIH YSLIHDDLP+MDN +RRG+PT HI++ E +AI+AG+ L T AF I++ Sbjct: 67 DAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEESAILAGDALQTLAFSILA 126 Query: 133 S-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 P + R ++ L G+ GM GGQ LD+ E + ++ I + KTGAL+ Sbjct: 127 DAPMPGVMAESRIAMLSELAQASGVAGMCGGQALDLAAEGKKVTLNELEQIHRHKTGALI 186 Query: 190 CFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A GA+ A S L F +G+ FQ+ DD+LD D Sbjct: 187 RSAVRLGALTAGESGRAALPALDRFANAIGLAFQVQDDILDVTGDTE 233 >gi|15837263|ref|NP_297951.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella fastidiosa 9a5c] gi|9105539|gb|AAF83471.1|AE003910_7 geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella fastidiosa 9a5c] Length = 291 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 89/235 (37%), Positives = 130/235 (55%), Gaps = 13/235 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59 M+ L ++ +R D+ L+ L + TQ RL +A+RY +L GK+IR LV Sbjct: 1 MSEALFTR---WRQRTDSYLERTL-----SIPTQAPQRLHAAMRYTVLSRGKRIRPLLVY 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF+V+ AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ Sbjct: 53 AAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILT 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177 G+ L T AFE ++ + ++R + +LTH G+ GM GGQ +DI +T + Sbjct: 113 GDALQTLAFECLADAPSD--TSLRIAWLQTLTHAAGVAGMCGGQAIDIDATGQSQTLKAL 170 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + +K+G LM A GA+ S + L F LG+ FQ+ DD+LD E Sbjct: 171 EAMHALKSGTLMRAAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIES 225 >gi|150010302|ref|YP_001305045.1| putative isoprenoid biosynthesis related protein [Parabacteroides distasonis ATCC 8503] gi|255012432|ref|ZP_05284558.1| putative isoprenoid biosynthesis related protein [Bacteroides sp. 2_1_7] gi|298374699|ref|ZP_06984657.1| polyprenyl synthetase [Bacteroides sp. 3_1_19] gi|149938726|gb|ABR45423.1| putative isoprenoid biosynthesis related protein [Parabacteroides distasonis ATCC 8503] gi|298269067|gb|EFI10722.1| polyprenyl synthetase [Bacteroides sp. 3_1_19] Length = 324 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 12/224 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + IL + + + T L I Y L LGGK+IR L +++N + A++ Sbjct: 4 FENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +E H ++L+HDDL MD RR KPTVH ++ TAI++G+ +L A+++I S Sbjct: 64 PALGLEVFHNFTLLHDDL--MDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGST 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191 + + + + GGQ D++ E + E + + ++KT L+ Sbjct: 122 EHGHLKQVLDLFTQTAAE------ICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLAC 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + ++GA++ ASQ + L FG N+G+ FQL DDLLD D Sbjct: 176 SLKTGALLGGASQEDAGNLYAFGINIGLAFQLQDDLLDVYGDTA 219 >gi|325265404|ref|ZP_08132128.1| geranyltranstransferase [Clostridium sp. D5] gi|324029405|gb|EGB90696.1| geranyltranstransferase [Clostridium sp. D5] Length = 296 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 122/244 (50%), Gaps = 15/244 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN Q + I+ IL L + ++ A+ YAL+ GGK++R L+ Sbjct: 1 MN--FKETYQTKVEAIERILKAYLPAGEG-----YQTVIMEAMEYALMAGGKRLRPMLMQ 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E LF AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I+ Sbjct: 54 ETYRLFGGCGTRIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVMYGEDIGILT 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175 G+ LL AFE + + + + L G+ GM+GGQ++D++ I Sbjct: 114 GDALLNCAFETAAKAFDMEPEKSLQTGKALQILAGKAGIYGMIGGQVVDVKSTGDQISGE 173 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 ++ I K+KTGAL+ + GA++A A++ + + +G+ FQ+ DD+LD E Sbjct: 174 KLNFIYKLKTGALIEASMMIGAVLAGAAREQVNAVEEIAGKVGLAFQIQDDILDVTSTAE 233 Query: 233 DLPK 236 +L K Sbjct: 234 ELGK 237 >gi|310642662|ref|YP_003947420.1| polyprenyl synthetase [Paenibacillus polymyxa SC2] gi|309247612|gb|ADO57179.1| Polyprenyl synthetase [Paenibacillus polymyxa SC2] Length = 303 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 81/238 (34%), Positives = 121/238 (50%), Gaps = 10/238 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + + + L + D L ++ Y+L GGK++R LV A Sbjct: 8 SFKEYLAVTADAVSSALTEQFP-----AHWDIPDVLRESMNYSLTAGGKRLRPLLVIAAA 62 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + AL V A+E +H YSLIHDDLP+MD+ RRGK T H Y E A++AG+ Sbjct: 63 EAFGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDA 122 Query: 123 LLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178 LLT+AF I + + ++ L+ G +GM+GGQ+ D+ E ++ Sbjct: 123 LLTHAFYCIVQAGRLHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKELE 182 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KT L+ F+ +G +A A +++ E LRCFG +LG+ FQ+ DD+LD D K Sbjct: 183 YIHLHKTADLIIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESK 240 >gi|288802129|ref|ZP_06407570.1| polyprenyl synthetase [Prevotella melaninogenica D18] gi|302346894|ref|YP_003815192.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845] gi|288335564|gb|EFC73998.1| polyprenyl synthetase [Prevotella melaninogenica D18] gi|302150740|gb|ADK97001.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845] Length = 324 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 15/228 (6%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 + IL + + + L I+Y L LGGK+IR L+ +LF + T L Sbjct: 5 NEILSKVNEYINNLTYDRKPQSLYEPIKYVLSLGGKRIRPTLMLLSYNLFKDDPETILSP 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E H Y+L+HDDL MD+ +RRG+ TVH+++D TAI++G+ +L AFE ++ Sbjct: 65 ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMAQCD 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFA 192 ++ + + + GQ D++ E + E + + ++KT L+ A Sbjct: 123 SRHLSEVL------RLFTVTALEIGEGQQYDMEFENRNDVKEEEYIEMIRLKTSVLLACA 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A A + E L FGE +G+ FQL DD LD D KK Sbjct: 177 MKIGAILADAPAEDVENLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 224 >gi|15228704|ref|NP_189589.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] gi|75335025|sp|Q9LIA0|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11, chloroplastic; Short=GGPP synthase 11; Short=GGPS11; AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11; AltName: Full=Dimethylallyltranstransferase 11; AltName: Full=Farnesyl diphosphate synthase 11; AltName: Full=Farnesyltranstransferase 11; AltName: Full=Geranyltranstransferase 11; Flags: Precursor gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana] gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana] Length = 357 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 17/244 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + ++ + L+ + Q + A+RY+LL GGK++R L Sbjct: 61 FDFKSYMIRKAESVSAALN-------VSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAA 113 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + TA+ A+E IH SLIHDDLP MD+ +RRGKPT H ++ E A++AG+ Sbjct: 114 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGD 173 Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175 LL AFE ++ L R + ++ L IG +G++ GQ+ D+ + ++ Sbjct: 174 ALLALAFEHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLE 233 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--- 232 ++ I KT AL+ A GAIM ++ E E+LR + +G++FQ+ DD+LD E Sbjct: 234 RLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTK 293 Query: 233 DLPK 236 +L K Sbjct: 294 ELGK 297 >gi|169350498|ref|ZP_02867436.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552] gi|169292818|gb|EDS74951.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552] Length = 282 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 7/218 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76 I+ ++ + + ++ A++Y+LL GGK+IR L+ + +N+ L Sbjct: 3 QIIQEINTRLIKITDCFQDSKVKDAMKYSLLAGGKRIRPLLMLRIIQSYGLNYHDYLDAA 62 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE IH YSLIHDDLP MDN +RRGKPT H Q+DE TAI+AG+GLL A +I Sbjct: 63 CAIEMIHTYSLIHDDLPGMDNDDLRRGKPTCHRQFDEATAILAGDGLLNEAANVILKANY 122 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACE 194 + I +L G+ GM+ GQ LD +++ + ++ +I KTG L+ + + Sbjct: 123 NSELKIALLSIL--YQASGVNGMILGQALDIKFENKKANRKELDLIHHHKTGDLISASMQ 180 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 GA++A+ N+ E + G +G+ FQ+ DD+LD Sbjct: 181 MGALVANV--NDLETFKEIGYKIGLAFQIQDDILDVVG 216 >gi|153810474|ref|ZP_01963142.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174] gi|149833653|gb|EDM88734.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174] Length = 263 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 122/240 (50%), Gaps = 12/240 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 +LQ+ + + ++ L + +T + A+ Y++ GGK++R L+ E Sbjct: 6 NFKEELQQRTDYAEEVIRRWLPEERGFSKT-----MAQAMNYSMCAGGKRLRPILLLETL 60 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF + A A IE IH +SLIHDDLP++DN RRG+ T H Y E +++G Sbjct: 61 RLFGGDEKLAEPFMAGIEMIHTHSLIHDDLPAIDNDDYRRGRLTTHKVYGEAMGVLSGVT 120 Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFM 179 LL YA+E + D R + + + G+ GMLGGQ +D++++ + + Sbjct: 121 LLNYAYETMFRAFELTDDKDRVIRAVRIMAEKTGIYGMLGGQSVDVENDGKPLEKDLLDY 180 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 I + KT AL+ + +GA++A A + + + ++G+ FQ+ DD+LD +L K Sbjct: 181 IYEHKTSALIEASMMAGAVLAGADEEQTSMIEQAASDIGLAFQIQDDILDVTSTSQELGK 240 >gi|264679659|ref|YP_003279566.1| polyprenyl synthetase [Comamonas testosteroni CNB-2] gi|262210172|gb|ACY34270.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2] Length = 324 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 123/236 (52%), Gaps = 11/236 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 +QE R + L + A L A+RYA+L GGK++R LV A Sbjct: 32 DFSVWMQERLARTEDALSRWVGINA-------PAGLGEAMRYAVLDGGKRLRPLLVWAAA 84 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LR G A+E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E +A++AG+ Sbjct: 85 EAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDA 144 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180 L AFE++ + +++++L L G QGM GGQ +D+ + + E Q+ + Sbjct: 145 LQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKHLSEAQLREM 204 Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++KTGAL+ + GA A L +G+ LG+ FQ+ DD+LD D Sbjct: 205 HRLKTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSA 260 >gi|221310351|ref|ZP_03592198.1| hypothetical protein Bsubs1_13321 [Bacillus subtilis subsp. subtilis str. 168] gi|221314675|ref|ZP_03596480.1| hypothetical protein BsubsN3_13242 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319598|ref|ZP_03600892.1| hypothetical protein BsubsJ_13163 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323874|ref|ZP_03605168.1| hypothetical protein BsubsS_13292 [Bacillus subtilis subsp. subtilis str. SMY] gi|255767538|ref|NP_390308.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str. 168] gi|321311912|ref|YP_004204199.1| geranyltranstransferase [Bacillus subtilis BSn5] gi|251757288|sp|P54383|ISPA_BACSU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|225185166|emb|CAB14359.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str. 168] gi|291484870|dbj|BAI85945.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto BEST195] gi|320018186|gb|ADV93172.1| geranyltranstransferase [Bacillus subtilis BSn5] Length = 296 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 87/240 (36%), Positives = 135/240 (56%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L S L + K I+ L + + D L ++ Y+L GGK++R +V Sbjct: 1 MTNKLTSFLADRKKTIENQL------SVYTEKLDMPDSLKKSMLYSLQAGGKRLRPLIVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H + E TA++A Sbjct: 55 AVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLA 114 Query: 120 GNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLT +F++I+S + ++ R +L+ L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I + KT L+ F +GAI+A A + + E LR F ++GI FQ+ DD+LD E K Sbjct: 175 LESIHERKTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEK 234 >gi|68171692|ref|ZP_00545051.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa] gi|88657808|ref|YP_507273.1| putative geranyltranstransferase [Ehrlichia chaffeensis str. Arkansas] gi|67998884|gb|EAM85577.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa] gi|88599265|gb|ABD44734.1| putative geranyltranstransferase [Ehrlichia chaffeensis str. Arkansas] Length = 267 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 90/215 (41%), Positives = 125/215 (58%), Gaps = 3/215 (1%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L+ Q S + + D LL+++RY++ GK IR FLV A +FNVN L V AA+E Sbjct: 8 LVKQLESILPENNQDILLTSMRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAVEI 67 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSLIHDDLP +DN IRRG+ + H +++E AI+ G+ LLT AFEI+S+ Sbjct: 68 IHVYSLIHDDLPGIDNENIRRGQASSHKKFNEAIAILTGDALLTLAFEILSTIDE--SPF 125 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 IR ++ +L +G QGM+ GQ+LD + D + I +KT ACE G I+ + Sbjct: 126 IRCCMIKALAKALGYQGMIQGQILDTETIAKDTNDIQAIHVLKTAQFFSVACELGGILGN 185 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 AS E L +G NLG FQ+ DD+ D +D K Sbjct: 186 ASNIELNALANYGLNLGHAFQVKDDIADANQDKSK 220 >gi|262039631|ref|ZP_06012924.1| geranyltranstransferase [Leptotrichia goodfellowii F0264] gi|261746346|gb|EEY33892.1| geranyltranstransferase [Leptotrichia goodfellowii F0264] Length = 271 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 118/202 (58%), Gaps = 4/202 (1%) Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 ++ + L A++YA++ GGK+IR L+ LF + + A+E IHCYSL+HDDL Sbjct: 6 KYPEELSEAMKYAVMNGGKRIRPILMYMICDLFGKKYDKIEDMATALEFIHCYSLVHDDL 65 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 P+MDN RRGK T H++Y E TAI+ G+ LLT AF +I+ + D +++++ L+ Sbjct: 66 PAMDNDMYRRGKLTTHVKYGESTAILVGDVLLTEAFNVIAESEKT-DDTAKAKIIAKLSE 124 Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G GM+GGQ +DI+ E + + I KTG L+ A E I ++++E+L Sbjct: 125 YAGFYGMIGGQFMDIKSEHTRVSYDTLKYIHANKTGKLITAAIELPLIALDIEESKREKL 184 Query: 211 RCFGENLGIIFQLADDLLDCEE 232 + E +G FQ+ DD+LD E Sbjct: 185 VGYSELIGTAFQIKDDILDIEG 206 >gi|306839463|ref|ZP_07472271.1| geranyltranstransferase [Brucella sp. NF 2653] gi|306405408|gb|EFM61679.1| geranyltranstransferase [Brucella sp. NF 2653] Length = 288 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 111/224 (49%), Positives = 151/224 (67%), Gaps = 3/224 (1%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73 ++ L LL + + RL++A+R+ L GGK++R FLV E A+LF + L Sbjct: 2 EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVL 61 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 RV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYAF+II+S Sbjct: 62 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYAFDIIAS 121 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCF 191 +T+L R +L+ +LT GL GM GGQ LD+ E DE + +Q MKTGAL+ F Sbjct: 122 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 181 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ACE+GAI+A AS+ ++ER+ FG +G+ FQLADDLLD D Sbjct: 182 ACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAG 225 >gi|28199392|ref|NP_779706.1| farnesyl-diphosphate synthase [Xylella fastidiosa Temecula1] gi|182682121|ref|YP_001830281.1| polyprenyl synthetase [Xylella fastidiosa M23] gi|28057498|gb|AAO29355.1| geranyltranstransferase [Xylella fastidiosa Temecula1] gi|182632231|gb|ACB93007.1| Polyprenyl synthetase [Xylella fastidiosa M23] gi|307578386|gb|ADN62355.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 291 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 91/235 (38%), Positives = 130/235 (55%), Gaps = 13/235 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ L ++ +R D+ L+ L + TQ RL +A+RY +L GGK+IR LV Sbjct: 1 MSKALFTR---WCQRTDSYLERTL-----SIPTQAPQRLQAAMRYTVLSGGKRIRPLLVY 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF+V+ AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ Sbjct: 53 AAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILT 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177 G+ L T AFE ++ ++R + +LTH G+ GM GGQ LDI +T + Sbjct: 113 GDALQTLAFECLADA--PADTSLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKAL 170 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + +K+G LM A GA+ S + L F LG+ FQ+ DD+LD E Sbjct: 171 EAMHALKSGTLMRAAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIES 225 >gi|330814378|ref|YP_004358617.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487473|gb|AEA81878.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 293 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 100/237 (42%), Positives = 138/237 (58%), Gaps = 10/237 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 + ++ + + D L Q + N+ L A+ Y L GGKKIRS+L Sbjct: 2 STFDTDIKLVADKTDQYLKSYFSQQ------KQNNELFEAMGYGLFAGGKKIRSYLTVAA 55 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 LF++ TA+ V AAIEC+H YSLIHDDLPSMDN RRGK + H ++ E TAI+AGN Sbjct: 56 FDLFDIKEETAIAVAAAIECVHSYSLIHDDLPSMDNDDFRRGKESTHKKFGESTAILAGN 115 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179 LLT AFEI++S L ++S L+ +L G G+ GGQ LD+ E DE + Sbjct: 116 SLLTIAFEILTSNHLNLDKEVKSDLVFALASCSGHLGIAGGQFLDLSFEGKAQDEKTIIH 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +Q KTG LM F E+ AI+A + N++E L+ G ++G++FQ+ADDLLD D K Sbjct: 176 MQNKKTGELMGFCTEAAAIVAKKN-NDREELKKIGLDIGLLFQIADDLLDVYGDQNK 231 >gi|256839153|ref|ZP_05544663.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256740072|gb|EEU53396.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 324 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 12/224 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + IL + + + T L I Y L LGGK+IR L +++N + A++ Sbjct: 4 FENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +E H ++L+HDDL MD RR KPTVH ++ TAI++G+ +L A+++I S Sbjct: 64 PALGLEVFHNFTLLHDDL--MDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGST 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191 + + + + GGQ D++ E ++E + + ++KT L+ Sbjct: 122 EHGHLKQVLDLFTQTAAE------ICGGQQFDMEFESRMDVNEEEYIEMIRLKTAVLLAC 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + ++GA++ ASQ + L FG N+G+ FQL DDLLD D Sbjct: 176 SLKTGALLGGASQEDAGNLYAFGINIGLAFQLQDDLLDVYGDTA 219 >gi|85373942|ref|YP_458004.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594] gi|84787025|gb|ABC63207.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594] Length = 305 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 97/235 (41%), Positives = 140/235 (59%), Gaps = 8/235 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L S L ++ ID + D LL + L+ A+RY A+ GGK++R LV A Sbjct: 14 LSSALNRIARDIDAVFDVLLP-----VPDDTRAPLVEAMRYSAMDGGKRVRPLLVVATAE 68 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + V+ ALRVG A+E IH YSLIHDDLP MD+ +RRGK T+H YDE TA++AG+ L Sbjct: 69 MLGVSRDPALRVGCAVEAIHVYSLIHDDLPCMDDDELRRGKATLHKAYDEATAVLAGDSL 128 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 AFEI++ +T +++L+ +L G+ GM GGQM+D+ E D + +Q Sbjct: 129 HALAFEILTDDETTPDPFTQAELVRTLAAASGMAGMAGGQMMDMAAESADYDLHTITRLQ 188 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++KTGAL+ + E GAI+A + + LR + ++G+ FQ+ADDLLD E D K Sbjct: 189 QLKTGALLAASVEMGAILAKIPREGRSHLRAYARDIGLAFQIADDLLDAEGDEEK 243 >gi|81428294|ref|YP_395294.1| farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei 23K] gi|78609936|emb|CAI54983.1| Farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei 23K] Length = 290 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 76/228 (33%), Positives = 117/228 (51%), Gaps = 6/228 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + + + L + L ++ Y+++ GGK++R L+ Sbjct: 1 MADFKQLAARELPQFDAYLKRELAKIQEPTLQKSMTYSVMAGGKRLRPLLLFAVLESTGQ 60 Query: 68 N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + TA R A+E IH YSLIHDDLP+MDN +RRG+PT H + E AI+AG+GLLT Sbjct: 61 SIDETAFRAAGALELIHSYSLIHDDLPAMDNDDLRRGQPTNHKVFGEAEAILAGDGLLTL 120 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 AFE +++ + R +L+ L G GM+ GQ+ DI+ E + Q+ + +K Sbjct: 121 AFEWLATLN--VTAEQRIELVRLLAQAAGANGMVAGQIEDIEGEHKTLTLAQLQQVHHLK 178 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 TG L+ A GA++A + E LR F + G+ FQ+ DD+LD Sbjct: 179 TGCLIEVAVAMGAVLAQLGEVETTALRGFAQQFGLAFQIQDDILDVTS 226 >gi|319937357|ref|ZP_08011764.1| geranyltranstransferase [Coprobacillus sp. 29_1] gi|319807723|gb|EFW04316.1| geranyltranstransferase [Coprobacillus sp. 29_1] Length = 282 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 126/235 (53%), Gaps = 17/235 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 +++ I++ L++LL + N + A+ Y+LL GK++R L + + Sbjct: 1 MEQLRTEINSRLEELL-------EPLKNGPVKEAMSYSLLAPGKRLRPLLFLSVLRSYQI 53 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ + + AIE IH YSLIHDDLP MDN +RRG+PT H Q+DE TAI+AG+ LL Sbjct: 54 DYHIYMDIACAIEMIHTYSLIHDDLPGMDNDDLRRGRPTCHKQFDEATAILAGDALLNLG 113 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 I + +++ +L+ L G+ GM+ GQ DI E + Q+ I K KT Sbjct: 114 VNTI--LNISIDSDLKVKLLNRLYEASGINGMIYGQQQDITFEKQLANLEQLKDIHKHKT 171 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 G L+ + + G+++A+ S + G +LG+ FQ+ DD+LD E L KK Sbjct: 172 GELIAVSMQLGSLIANPSDYQY--WTSIGFDLGLAFQIQDDILDVVGNTEQLGKK 224 >gi|217977003|ref|YP_002361150.1| Polyprenyl synthetase [Methylocella silvestris BL2] gi|217502379|gb|ACK49788.1| Polyprenyl synthetase [Methylocella silvestris BL2] Length = 309 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 105/242 (43%), Positives = 147/242 (60%), Gaps = 8/242 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 +L+ + ++T+LD LL + + RLL AIRY+ L GGK++R FL+ E A Sbjct: 8 EFDKRLKTAADAVETMLDRLLGPSPLAGEIARPGRLLEAIRYSSLGGGKRLRPFLLIETA 67 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF V R AA+E IHCYSL+HDDLP++DN +RRG+ T H YDE TAI+ G+G Sbjct: 68 RLFGVEGEGVTRAAAAVEMIHCYSLVHDDLPALDNDDLRRGRATTHKAYDEATAILVGDG 127 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVF 178 LLTYAF++++ P T IR++L+L+L G GM+GGQ+LD++ E V Sbjct: 128 LLTYAFDVLADPATHADPAIRAELVLALARAAGFGGMIGGQVLDLEAEQSTAPHTAEAVI 187 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 +Q MKTGAL+ F+ +GAI+ A + L +G LG FQ+ADD+LD E D L Sbjct: 188 RLQSMKTGALLHFSVLAGAIIGAADAKARAALSAYGHALGAAFQVADDILDVEADEATLG 247 Query: 236 KK 237 K+ Sbjct: 248 KR 249 >gi|15606136|ref|NP_213513.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5] gi|6225572|sp|O66952|ISPA_AQUAE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|2983323|gb|AAC06913.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5] Length = 262 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 79/219 (36%), Positives = 119/219 (54%), Gaps = 8/219 (3%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTA 72 +RI+T + + + ++ + + L+ A++Y L GK+IR AS N A Sbjct: 2 ERIETWKEKIEKRLNEILKPEGPEELIEAMKYYPLQKGKRIRPLFTVAVASALGGNEDDA 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + VG+ IE IH YSLIHDDLP MDN RRG PT HI++ E A++AG+ LLTY FE++S Sbjct: 62 ITVGSGIELIHNYSLIHDDLPCMDNDVWRRGLPTCHIKFGEAMALLAGDALLTYTFEVLS 121 Query: 133 SPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 + L ++ + G GM+GGQ+LDI+ ++ + KTGAL Sbjct: 122 QRENYKTLSCEEILEINKIIAQKAGSNGMVGGQVLDIKGY----EDLYEVSVKKTGALFE 177 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GA++A + KE + G +G++FQ+ DD LD Sbjct: 178 ACFMCGAVVAKRREKLKE-MESIGRKVGLLFQMVDDYLD 215 >gi|152979039|ref|YP_001344668.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z] gi|150840762|gb|ABR74733.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z] Length = 296 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 87/229 (37%), Positives = 131/229 (57%), Gaps = 7/229 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67 Q+N ++ ++ + + + T + L A++Y LLGGK+IR FLV + Sbjct: 4 FQQNLCQVQHRINSFMENQFNDINTFGSP-LADAMKYGLLLGGKRIRPFLVYATGDMLGA 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AAIE IH YSLIHDDLP+MDN +RRGKPT HI +D TAI+AG+ L T+A Sbjct: 63 DLNALDYAAAAIESIHAYSLIHDDLPAMDNDELRRGKPTCHIAFDHATAILAGDALQTFA 122 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 FEII+ T L + +L+ L+ G++GM GQ LD+ E + ++ +I + KT Sbjct: 123 FEIITKS-TALCAEQKLKLVQELSRAAGVRGMCLGQSLDLLAEQKKVTLAELELIHRNKT 181 Query: 186 GALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 GAL+ A G I + +A+ RL+ + + +G+ FQ+ DD+LD E Sbjct: 182 GALLTAALMMGFICSPHYANHALACRLKQYADAIGLAFQVRDDILDIEG 230 >gi|90022863|ref|YP_528690.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40] gi|89952463|gb|ABD82478.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40] Length = 295 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 129/235 (54%), Gaps = 9/235 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ L L + + + +L++ L+ +N L+ A+RY+LL GGK++R LV Sbjct: 1 MSTELTHFLAKYREHTNGLLEERLIGLK-----HYNTDLIEAMRYSLLLGGKRVRPVLVY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A A AIE IH YSLIHDDLP+MD+ +RRG+PT HI Y E TAI+A Sbjct: 56 AAAYATGGISAAADDCACAIEAIHTYSLIHDDLPAMDDDALRRGQPTCHIAYSEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ L AFE +++ + + + Q + +L G GM+ GQ +D D+ +D + Sbjct: 116 GDALQCQAFEWLANSQ-HMPASAALQAIAALAKASGASGMVLGQAIDLAAVDKSVDLQHL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + KTGAL+ + E GAI A A+ + +LR + +G+ FQ+ DD+LD Sbjct: 175 ETMHQHKTGALISASVEMGAIAAGATPTQTAQLRQYASAIGLAFQVQDDILDVTA 229 >gi|229825480|ref|ZP_04451549.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC 49176] gi|229790043|gb|EEP26157.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC 49176] Length = 307 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 83/246 (33%), Positives = 127/246 (51%), Gaps = 15/246 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN +L+ + + ++ + + + + L A+ Y+LL GGK++R ++ Sbjct: 1 MNNTFTDRLRLKTDEAEKLVAEYAPKLG-----EEDKLLEEAMNYSLLAGGKRLRPLIML 55 Query: 60 ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 E LF + AA+E IH YSLIHDDLP+MDN +RRG+PT H Y E AI+ Sbjct: 56 EIFRLFGGKKEGLVRPFAAALEMIHTYSLIHDDLPAMDNDDLRRGRPTNHKVYGEAVAIL 115 Query: 119 AGNGLLTYAFEIISSP----KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---- 170 AG+GLL A E S +T + + + L G GM+GGQ+LD+ E Sbjct: 116 AGDGLLNLAAETSSKAFRYCETICEYKRVGEALSRLFTYSGADGMIGGQILDMLSEEGKK 175 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 E + +KTG L+ A GA++A A ++E + + G ++G++FQL DD+LD Sbjct: 176 EKTEDFFLTMYDLKTGGLIKAAFVIGALLAGAGEDEIDIIEKVGASVGLVFQLQDDILDI 235 Query: 231 EEDLPK 236 D K Sbjct: 236 SGDETK 241 >gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98] Length = 297 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 10/234 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 G + + E+ I+ L + Q + L A+ Y+L GGK++R L+ Sbjct: 4 GDFDAFVIESKMFIEKELARYANEL------QCPNVLRDAMTYSLEAGGKRLRPLLLFAT 57 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+ Sbjct: 58 LHAFGKERELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGD 117 Query: 122 GLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178 GLLTYAF+++S+ + I+ +L L L G +GM+ GQ+ D++ E + ++ Sbjct: 118 GLLTYAFQVVSAYNYEGISSEIKLRLALELAKAAGPEGMVAGQVADMEAEGKHLTLNELE 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I K KTG L+ FA +GAI+A A++ E+E+L F + +G+ FQ+ DD+LD E Sbjct: 178 YIHKHKTGRLLEFAVLAGAILAGATKEEEEKLLAFAKYVGLAFQIRDDILDVEG 231 >gi|301308384|ref|ZP_07214338.1| polyprenyl synthetase [Bacteroides sp. 20_3] gi|300833854|gb|EFK64470.1| polyprenyl synthetase [Bacteroides sp. 20_3] Length = 324 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 12/224 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + IL + + + T L I Y L LGGK+IR L +++N + A++ Sbjct: 4 FENILQRIKSEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +E H ++L+HDDL MD RR KPTVH ++ TAI++G+ +L A+++I S Sbjct: 64 PALGLEVFHNFTLLHDDL--MDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGST 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191 + + + + GGQ D++ E + E + + ++KT L+ Sbjct: 122 EHGHLKQVLDLFTQTAAE------ICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLAC 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A ++GA++ ASQ + + L FG N+G+ FQL DDLLD D Sbjct: 176 ALKTGALLGGASQKDADHLYAFGINIGLAFQLQDDLLDVYGDTA 219 >gi|302670346|ref|YP_003830306.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio proteoclasticus B316] gi|302394819|gb|ADL33724.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio proteoclasticus B316] Length = 313 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 25/252 (9%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M +L + + I+ IL L + + +T ++ A+ Y+LL GGK++R ++ Sbjct: 1 MGNDFNKRLADKAAHIEDILKAFLPKEEGYART-----VIEAMNYSLLAGGKRLRPMMIL 55 Query: 60 ECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 E LF + + AA+E IH YSL+HDDLP+MDN RRG+ T H Y A Sbjct: 56 EAYKLFAGNDADEKVVYPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHAVYGAGMA 115 Query: 117 IIAGNGLLTYAFEII---------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 +AG+GLL A+E S N + L G+ GM+GGQ DI Sbjct: 116 TLAGDGLLNLAYETAINGAMRGTTLSDYDGDNSNRYLAALDILAGKAGIYGMVGGQCADI 175 Query: 168 QDEFIDE-------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220 E E + I + KTGAL+ + GA++ AS + + G N+GI Sbjct: 176 CAENATEIPEDEMKDTLHYIDENKTGALIEASLMIGAVIGGASAQQVSMMEKIGSNVGIA 235 Query: 221 FQLADDLLDCEE 232 FQ+ DD+LD Sbjct: 236 FQIQDDILDITS 247 >gi|312143726|ref|YP_003995172.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus'] gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus'] Length = 294 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 93/237 (39%), Positives = 139/237 (58%), Gaps = 9/237 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G + L+ + ++ L++L+ + + L A+RY LL GGK+IR L Sbjct: 2 DGFKAILKSKAAELENSLEELMELKEDELAPE----LSEAMRYTLLSGGKRIRPILTLLT 57 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L ++ AL+ G+A+E IH YSLIHDDLP+MD+ +RRGK T H+ + E AI+AG+ Sbjct: 58 TELLKGDYQAALKSGSALEMIHSYSLIHDDLPAMDDDQLRRGKKTNHLVFGEAKAILAGD 117 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAFEI+S +L+ + +++ + N G+ GM+GGQ LDI E + ++ Sbjct: 118 ALLTYAFEILSEL--ELEPAKKIKIIKLIASNSGMLGMVGGQTLDIDAEKKELSLAEMQK 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ + SG + S+ EKE L+ + ENLG++FQ+ DDLLD D K Sbjct: 176 IHAAKTGALIKASVLSGVYCSVYSRTEKEALQKYAENLGVLFQVVDDLLDVTGDTEK 232 >gi|149925097|ref|ZP_01913408.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1] gi|149814025|gb|EDM73658.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1] Length = 294 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 83/232 (35%), Positives = 118/232 (50%), Gaps = 5/232 (2%) Query: 3 GGLPSKLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 LPS L E ++ LD +L A RL A+RYA+L GGK++R L Sbjct: 5 FDLPSYLDECRAAVNAALDAVLAMPEAGQPGADDPGRLREAMRYAVLQGGKRMRPVLTIA 64 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + AL A+E IH YSL+HDDLP+MDN RRGKPTVH+++ AI+ G Sbjct: 65 ACQAAGGDTAHALPAACALEMIHAYSLVHDDLPAMDNDLERRGKPTVHVEFGHANAILVG 124 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178 + LLT AFE+++ + + + L G+ GM+GGQ LD+ + D + Sbjct: 125 DALLTDAFEVLARGTEGVPRANIADAVTILARCAGINGMVGGQALDLIAGQDIADLETLE 184 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLD 229 + +KTG L A G + + A+ +L +G GI FQ ADD+LD Sbjct: 185 RVHALKTGGLYAAAGALGGLSSPTAAPEAATQLERYGLAFGIAFQHADDVLD 236 >gi|262068286|ref|ZP_06027898.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693] gi|291378024|gb|EFE85542.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693] Length = 298 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 83/243 (34%), Positives = 125/243 (51%), Gaps = 13/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN L+E + + + + + + YALL GGK++R FL+ Sbjct: 1 MNSDFQVYLKEKTNFF------ETELKKELEELSYPETIAKGMEYALLNGGKRLRPFLLF 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L N + ++ IE IH YSL+HDDLP++DN RRGK T H + E AI+ Sbjct: 55 TTLELLNQDIQKGVKSAIGIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILI 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176 G+ LLTYAF ++S L + ++S T G+ GM+GGQM+DI+ E I+ Sbjct: 115 GDALLTYAFYMLSQKNLNLLSFEQITNIISKTSAYAGINGMIGGQMIDIESENKKINLET 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + I K KTG L+ E I+A S++++ L + E +G+ FQ+ DD+LD E + Sbjct: 175 LKYIHKHKTGKLIKLPIEIACIIAGVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFEE 234 Query: 234 LPK 236 L K Sbjct: 235 LGK 237 >gi|154491788|ref|ZP_02031414.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC 43184] gi|154088029|gb|EDN87074.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC 43184] Length = 324 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 12/224 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + IL + + T L I Y L LGGK+IR LV +L+ N TA+ Sbjct: 4 FNDILQKIEQEITRLQFTYPPKSLYDPIEYILSLGGKRIRPALVLMACNLYKENVDTAVN 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 +E H ++L+HDDL MD+ RR KPTVH ++ TAI++G+ +L A+++I Sbjct: 64 PALGLEVFHNFTLLHDDL--MDDADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGET 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191 +++ I + + GGQ D++ E + E + + ++KT L+ Sbjct: 122 ESESLKEILDLFTRT------ALEICGGQQYDMEFESRTDVTEEEYIEMIRLKTAVLLAC 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A + GAIM +A + + E L FG N+G+ FQL DDLLD D Sbjct: 176 ALKMGAIMGNAPKADAETLYQFGINIGLAFQLQDDLLDVYGDTA 219 >gi|20094211|ref|NP_614058.1| geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19] gi|19887236|gb|AAM01988.1| Geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19] Length = 324 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 68/238 (28%), Positives = 113/238 (47%), Gaps = 22/238 (9%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + +L + +D ++++L + + L A + + GGK+IR L Sbjct: 1 MRSEILKELNRARELVDAKIEEVLPR-------GGPEDLYDACWHLIEAGGKRIRPLLAI 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + + L A+E IH ++LIHDD+ MD RRG P VH+++ AI+A Sbjct: 54 KSCLMLGGSEEDVLPEAVAVELIHTFTLIHDDI--MDEDDERRGVPAVHVKWGVPVAILA 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176 G+ L + AFE+ + ++ + GQ +DI E + E + Sbjct: 112 GDTLFSKAFEVAAEGGDVEAVKELAR---------ACTEICEGQAMDIGFENRTEVTEDE 162 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + + KT AL+ +C G + A A++ + E LR +GENLGI FQ+ DD+LD D Sbjct: 163 FLEMIRKKTAALIRTSCVVGGLKAGANREQLEALREYGENLGIAFQIQDDVLDLVGDE 220 >gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44] gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44] Length = 313 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 123/236 (52%), Gaps = 11/236 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 +QE R + L + A L A+RYA+L GGK++R LV A Sbjct: 21 DFSVWMQERLARTEDALSRWVGINA-------PAGLGEAMRYAVLDGGKRLRPLLVWAAA 73 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LR G A+E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E +A++AG+ Sbjct: 74 EAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDA 133 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180 L AFE++ + +++++L L G QGM GGQ +D+ + + E Q+ + Sbjct: 134 LQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREM 193 Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++KTGAL+ + GA A L +G+ LG+ FQ+ DD+LD D Sbjct: 194 HRLKTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSA 249 >gi|302387567|ref|YP_003823389.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1] gi|302198195|gb|ADL05766.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1] Length = 298 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 9/235 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 N L +K + +++ L + T +L+A+ Y++ GGK++R L+ E Sbjct: 3 NMNFNDMLSARTKEVGLVVETYLPPVEGYQST-----VLAAMDYSVRAGGKRLRPMLMEE 57 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 LF N AA+E IH SLIHDDLP MDN +RRG PT +++ A++AG Sbjct: 58 TYRLFGGNGKEIEPFMAAMEMIHTSSLIHDDLPCMDNDTLRRGLPTAWVKFGYDMAVLAG 117 Query: 121 NGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQV 177 +GLL Y+ E + + ++ ++ M L G+ GM+GGQ +D++ + I + ++ Sbjct: 118 DGLLIYSMETAAKALSMTDRPDLVARCMGILAEKTGIHGMIGGQTVDVELAGKPIPKEKL 177 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I ++KTGAL+ + GA++ A + + + + LG+ FQ+ DD+LD Sbjct: 178 HFIYRLKTGALLEASMMIGALLGGADERQLKLVENMASCLGMAFQIQDDILDLTS 232 >gi|296313727|ref|ZP_06863668.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768] gi|296839651|gb|EFH23589.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768] Length = 298 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 10/236 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 L + Q + + +L+ L + + L A+RYA L GGK++R LV + Sbjct: 6 DLKAWQQRAQAQTELLLERFLPS-----EGEIPHTLHEAMRYAALDGGKRLRPMLVLAAS 60 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L H + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G+ Sbjct: 61 ELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVGDA 120 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180 L T AF+++S P T+L + ++ L G +GM GGQ +D+ + + + + + Sbjct: 121 LQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGRQMPQADLEQM 179 Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 180 HSLKTGALIRAAVVLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|163781563|ref|ZP_02176563.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp. 128-5-R1-1] gi|159882783|gb|EDP76287.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp. 128-5-R1-1] Length = 266 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 86/228 (37%), Positives = 118/228 (51%), Gaps = 15/228 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 +L RI+ L +LL+ Q L A+ Y L GK++R L AS Sbjct: 3 RLSLWKDRIEDRLRELLV-------PQQPQELFEAMAYYLFQPGKRVRPLLTVAVASSLG 55 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A+ VG AIE IH YSLIHDDLP+MDN RRG P+ H ++ E A++AG+ LLTY Sbjct: 56 GDEEDAITVGCAIEMIHNYSLIHDDLPAMDNDDFRRGLPSCHRKFGEAMAVLAGDALLTY 115 Query: 127 AFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 AFE++S L +L+ ++ G+ GM+GGQ LDI E + + K Sbjct: 116 AFELMSKEGVFRTLSPEEVVKLINTIAVKSGIGGMVGGQALDIGG----EENLEEVNLKK 171 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T AL SG I++H KE L G G++FQL DD+LD + Sbjct: 172 TAALFEACFISGGIVSHRGDLFKE-LEEVGREFGLLFQLVDDILDRDG 218 >gi|290968311|ref|ZP_06559853.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L] gi|290781670|gb|EFD94256.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L] Length = 295 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 84/238 (35%), Positives = 120/238 (50%), Gaps = 13/238 (5%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64 + L I+ L LL T L A+ Y+LL GGK+IR L Sbjct: 5 EAYLAAKKTVIEARLQQLLPVTEPAFAP-----LYKAMNYSLLAGGKRIRPILFLAALEA 59 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + V A+EC+H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLL Sbjct: 60 LGKESSVYMDVACALECVHSYSLIHDDLPAMDNDDLRRGKPTNHRVFGEGMAILAGDGLL 119 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQ 181 T+AFE+++ + + I + L H G GM+GGQ D+ E I + ++ Sbjct: 120 TFAFELLARQRVADAEKI-GACIRVLAHAAGPAGMVGGQAYDLLSEGHGDIGTEGLKLMH 178 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + KTG + I+A A ++ L+ + E LG+ FQ+ DD+LD E +L K Sbjct: 179 RGKTGVIFEAVMSMAGILAAAPAAVRQVLQAYAEQLGLTFQITDDILDACGTEAELGK 236 >gi|262274770|ref|ZP_06052581.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] gi|262221333|gb|EEY72647.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] Length = 310 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 89/240 (37%), Positives = 125/240 (52%), Gaps = 19/240 (7%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRL--------------LSAIRY-ALLGGKKIRSFLVT 59 +I + D L T H QT++ND+L + A+++ ALLGGK++R FL Sbjct: 8 KIRAMSDTALTSTLLHYQTRNNDKLAYWLASLGHQEQPLIQAMKHGALLGGKRVRPFLTY 67 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF AA+ECIH YSLIHDDLP+MDN +RRG+PT H+ +DE +AI+A Sbjct: 68 MTGKLFGAPDEALDTPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHVAFDEASAILA 127 Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ + R Q++ L G GM GQ LD+ E +D Sbjct: 128 GDALQTLAFTILAEGDLSPEGEAYRIQMVKELAAASGAAGMCLGQALDLSAEGKKVDVDT 187 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A GA+ A +L F +G+ FQ+ DD+LD D Sbjct: 188 LETIHRNKTGALIRCAVRLGALAAGKKGATYLSQLDTFSNAIGLAFQVQDDILDIISDTE 247 >gi|171464023|ref|YP_001798136.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193561|gb|ACB44522.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 300 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 93/242 (38%), Positives = 133/242 (54%), Gaps = 16/242 (6%) Query: 1 MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57 MN + +S R + LD LL + RL AIRYA GG K+IR L Sbjct: 1 MNSVFSFHEWVTSHSIRTEQTLDRLLDSAQTI-----PHRLHEAIRYAAQGGGKRIRPLL 55 Query: 58 VTECASLFN----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113 V L N V AIECIH YSL+HDDLP MD+ Y+RRG+PTVH +DE Sbjct: 56 VYAAGQLGNKSDVVPVEFLDAAAVAIECIHAYSLVHDDLPCMDDDYLRRGRPTVHKAFDE 115 Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EF 171 TA++ G+ L T AFEI+++ T +R +++ +L G +GM GGQ +D++ + Sbjct: 116 ATALLVGDALQTRAFEILAN--TNGDAQVRLRMISTLAAASGSRGMAGGQAIDLESVGKK 173 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 +D + + MKTGAL+ A E G I AH + + +L+ + ++LG+ FQ+ DD+LD Sbjct: 174 LDLQGLKQMHAMKTGALLSCAVELGGIAAHLNFAQMMQLQSYSKSLGLAFQIVDDVLDAT 233 Query: 232 ED 233 D Sbjct: 234 AD 235 >gi|15669051|ref|NP_247855.1| bifunctional short chain isoprenyl diphosphate synthase IdsA [Methanocaldococcus jannaschii DSM 2661] gi|2497457|sp|Q58270|IDSA_METJA RecName: Full=Bifunctional short chain isoprenyl diphosphate synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; AltName: Full=Geranyltranstransferase gi|1591545|gb|AAB98865.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Methanocaldococcus jannaschii DSM 2661] Length = 327 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 124/230 (53%), Gaps = 19/230 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 + ++ID L + + +D+L +A ++ L GGK+IR +L L + Sbjct: 15 KNILQKIDEELKTYVDK---------DDKLYNASKHLLFAGGKRIRPYLTVVTYMLKKDD 65 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L AA+E IH Y+LIHDD+ MDN RRGKPTVH+ Y E AI+AG+ L AF Sbjct: 66 IEEVLPAAAAVELIHNYTLIHDDI--MDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAF 123 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186 E +S +KDN ++ +L + + + GQ +D++ E + + + + KTG Sbjct: 124 EAVSR----IKDNKKAHEVLKILSKACV-EVCEGQAMDMEFENYYPTMEEYLDMIRKKTG 178 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 AL+ + GA+MA ++ E+E L+ + + +G+ FQ+ DD+LD D K Sbjct: 179 ALLEASVGIGAVMADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKK 228 >gi|260174038|ref|ZP_05760450.1| putative isoprenyl synthetase [Bacteroides sp. D2] gi|315922307|ref|ZP_07918547.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696182|gb|EFS33017.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 324 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L I Y L LGGK+IR L+ +L+ + + Sbjct: 6 QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++ Sbjct: 66 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPP 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ LD++ E + E + + ++KT L+ + Sbjct: 124 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A A+ + E L FG ++G+ FQL DDLLD D KK Sbjct: 178 KIGAILAGATAEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224 >gi|237720117|ref|ZP_04550598.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229450669|gb|EEO56460.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 324 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L I Y L LGGK+IR L+ +L+ + + Sbjct: 6 QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++ Sbjct: 66 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPP 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ LD++ E + E + + ++KT L+ + Sbjct: 124 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A A+ + E L FG ++G+ FQL DDLLD D KK Sbjct: 178 KIGAILAGATAEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224 >gi|228998970|ref|ZP_04158552.1| Geranyltranstransferase [Bacillus mycoides Rock3-17] gi|229006508|ref|ZP_04164153.1| Geranyltranstransferase [Bacillus mycoides Rock1-4] gi|228754742|gb|EEM04142.1| Geranyltranstransferase [Bacillus mycoides Rock1-4] gi|228760587|gb|EEM09551.1| Geranyltranstransferase [Bacillus mycoides Rock3-17] Length = 297 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 78/233 (33%), Positives = 132/233 (56%), Gaps = 10/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + ++E+ ++ L Q Q + L A+ Y+L GGK++R L+ Sbjct: 5 AFDAFVKESKTFVEEQLARYANQL------QCPNVLREAMTYSLEAGGKRLRPLLLFATL 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G Sbjct: 59 QAFEKERELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118 Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT+AF+++++ Q + + +L L L G +GM+ GQ+ D++ E ++ +++ Sbjct: 119 LLTHAFQVVTAYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I K KTG L+ +A +GA++A A+ ++++L F + +G+ FQ+ DD+LD E Sbjct: 179 IHKHKTGRLLEYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVEG 231 >gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group] gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa Japonica Group] gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa Japonica Group] gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group] Length = 376 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 12/236 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 + L + + LD M +RL ++RY+ L GGK++R L Sbjct: 81 SFDFQRYLSARADAVHDALDR-------AMPRGFPERLCESMRYSVLAGGKRVRPVLALA 133 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A V A+E IH SLIHDD+P MD+ +RRG+P+ H+ + E TA++AG Sbjct: 134 ACELVGGDAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAG 193 Query: 121 NGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQ 176 + L AFE ++ + + + + L G G+ GQ+ D + E + Sbjct: 194 DALHALAFEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAM 253 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I KT L+ A SGAI+ + E ER+R + +G++FQ+ DD+LD Sbjct: 254 LEYIHVHKTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTS 309 >gi|227530530|ref|ZP_03960579.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540] gi|227349536|gb|EEJ39827.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540] Length = 290 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 78/229 (34%), Positives = 121/229 (52%), Gaps = 12/229 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +L+E ++ID L+ + L S++ Y++ GGK++R L +F Sbjct: 3 ELKELKEQIDQFLEQQMPSDID------QPTLASSMEYSVNAGGKRLRPALTLTTVQIFG 56 Query: 67 VN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + ++ AIE +H YSLIHDDLP+MDN +RRGKPT H ++ A +AG+GLLT Sbjct: 57 GQLNQNVMKASTAIELLHTYSLIHDDLPAMDNDDLRRGKPTNHKKFGAGMATLAGDGLLT 116 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183 AF+ ++ QL +++L L+L G GM+ GQ DI+ E + Q+ + + Sbjct: 117 MAFQWLTD--NQLPTETQAELTLALAKAAGPAGMVAGQARDIEGEHQNLTLEQLRYLHRQ 174 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTG L+ +A +G I+ K L FG G+ FQ+ DDL+D Sbjct: 175 KTGDLLSYAVLAGGIITKQDSTTKNLLADFGAQFGLAFQIYDDLMDVVG 223 >gi|329298746|ref|ZP_08256082.1| polyprenyl synthetase [Plautia stali symbiont] Length = 299 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 85/231 (36%), Positives = 127/231 (54%), Gaps = 10/231 (4%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVN 68 + +R++ L L+ + L++A++Y ALLGGK++R FLV + Sbjct: 8 RAYHERVNQALTRLIDPL-----PFQSSPLVNAMQYGALLGGKRLRPFLVYATGEMLRAE 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI+Y E TAI+AG+ L T AF Sbjct: 63 AASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAF 122 Query: 129 EIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 I++ P + R ++ L G+ GM GQ LD+ E +D Q+ I + KT Sbjct: 123 TILADQPMPGVSPQDRIAMISELAQASGVAGMCCGQALDLAAEGKSVDLNQLEQIHRHKT 182 Query: 186 GALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 GAL+ A GA+ A A+ + +L + +G+ FQ+ DD+LD D Sbjct: 183 GALIRAAVRLGALTAGAAGRDALPQLDIYANAIGLAFQVQDDILDVVGDTA 233 >gi|157962808|ref|YP_001502842.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345] gi|157847808|gb|ABV88307.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345] Length = 293 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 137/238 (57%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L L+ +RI+ L+ + A + +L +A+++ AL+GGK+IR FLV Sbjct: 2 LLESLKLYQERINQQLELRIDSLADI-----DPQLKAAMKHGALIGGKRIRPFLVYAIGD 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + V T AAIEC+H YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MLGVKLSTLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 AFEIIS P + + ++ +L + G GM GGQ +D+ D+ I+ + + Sbjct: 117 QALAFEIISEPIENITPSQNLAMVRALANASGYSGMCGGQAMDLSATDKQIELATLIQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 K+KTGAL+ A E I A E++ L F + +G+ FQ+ DD+LD E+L K Sbjct: 177 KLKTGALIRCAVEFAIIAAKIEGQERQALLDFADAIGLAFQVQDDVLDIIASTEELGK 234 >gi|197334446|ref|YP_002155475.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio fischeri MJ11] gi|197315936|gb|ACH65383.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio fischeri MJ11] Length = 298 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 89/244 (36%), Positives = 131/244 (53%), Gaps = 18/244 (7%) Query: 1 MNGGLPSKLQ----ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55 M L +L N ++++ L+ + +Q L A++Y+LL GGK+ R Sbjct: 1 MTDSLKQQLTFFQNRNIEQLNQWLEKIEIQQ---------QPLTEAMKYSLLLGGKRARP 51 Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115 +LV A + + A AAIEC+H YSLIHDDLP+MDN +RRG T HI+YDE T Sbjct: 52 YLVYITAQMLGIKAEFADSAAAAIECVHSYSLIHDDLPAMDNDDLRRGHATCHIKYDEAT 111 Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172 AI+AG+ L T AFEI+++ + R ++ L+ G GM GQ LD+Q E + Sbjct: 112 AILAGDALQTLAFEILANGQLSDDAETSRIDMIRVLSKASGASGMCMGQSLDLQAEGKKV 171 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCE 231 D T + I KTGAL+ A + GA+ A + +L + + +G+ FQ+ DD+LD Sbjct: 172 DLTSLERIHANKTGALIKCAVQLGALCAGDKGKAILPQLEVYADAIGLAFQVQDDILDII 231 Query: 232 EDLP 235 D Sbjct: 232 SDTE 235 >gi|291545449|emb|CBL18557.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus sp. SR1/5] Length = 301 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 126/240 (52%), Gaps = 12/240 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 +L+ ++ + ++ + L + + +T + A+ Y++ GGK++R L+ E Sbjct: 8 NFKEELKRRTEEAEHVIREYLPEESGFAKT-----MAEAMNYSMTAGGKRLRPILIRETY 62 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF AA+E IH +SLIHDDLP++DN RRG+ T H Y E +++G Sbjct: 63 ELFGGKDKLCEPFMAAMEMIHTHSLIHDDLPALDNDDYRRGRLTTHKVYGEAMGVLSGVA 122 Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFM 179 LL A+E++ S D R M + G+ GMLGGQ +D++++ + Sbjct: 123 LLNRAYEVMLSAFDLTGDKDRVIAAMRIIADKTGINGMLGGQSVDVENDGKPLEHKMLDY 182 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I K KT AL+ + +GA++A AS+ E + + EN+G+ FQ+ DD+LD E+L K Sbjct: 183 IYKNKTSALIEASMMTGAVLAGASEKELKVVEQAAENIGLAFQIQDDILDVTSTQEELGK 242 >gi|160882687|ref|ZP_02063690.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483] gi|299147995|ref|ZP_07041058.1| polyprenyl synthetase [Bacteroides sp. 3_1_23] gi|156111857|gb|EDO13602.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483] gi|298514178|gb|EFI38064.1| polyprenyl synthetase [Bacteroides sp. 3_1_23] Length = 342 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L I Y L LGGK+IR L+ +L+ + + Sbjct: 24 QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 83 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++ Sbjct: 84 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPP 141 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ LD++ E + E + + ++KT L+ + Sbjct: 142 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSL 195 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A A+ + E L FG ++G+ FQL DDLLD D KK Sbjct: 196 KIGAILAGATAEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKK 242 >gi|308185891|ref|YP_003930022.1| geranyltranstransferase [Pantoea vagans C9-1] gi|308056401|gb|ADO08573.1| geranyltranstransferase [Pantoea vagans C9-1] Length = 264 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 85/203 (41%), Positives = 117/203 (57%), Gaps = 8/203 (3%) Query: 43 IRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 + Y ALLGGK++R FLV + + N + AA+ECIH YSLIHDDLP+MDN +R Sbjct: 1 MHYGALLGGKRLRPFLVYATGEMLHANPASLDVPAAAVECIHAYSLIHDDLPAMDNDALR 60 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGML 160 RG+PT HI+Y E TAI+AG+ L T AF I++ + R ++ L G+ GM Sbjct: 61 RGQPTCHIKYGEDTAILAGDALQTLAFSILADEAMPGVSAEYRLMMLSELAKASGVAGMC 120 Query: 161 GGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENL 217 GGQ LD+ E ID Q+ I + KTGAL+ A GA+ A A + L + E + Sbjct: 121 GGQALDLAAEGKSIDLDQLEQIHRHKTGALIRSAVRLGALTAGDAGREALPLLDRYAEAI 180 Query: 218 GIIFQLADDLLDCEED---LPKK 237 G+ FQ+ DD+LD D + K+ Sbjct: 181 GLAFQVQDDILDVIGDTAVIGKR 203 >gi|89099255|ref|ZP_01172133.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. NRRL B-14911] gi|89086101|gb|EAR65224.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus sp. NRRL B-14911] Length = 298 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 83/219 (37%), Positives = 129/219 (58%), Gaps = 6/219 (2%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +L+ L ++ S + + L A+ Y+L GGK+IR LV F + L+ Sbjct: 16 KMLERELEESVSRLAA--PEVLKKAMHYSLQAGGKRIRPLLVFATLKAFGEDTKKGLQAA 73 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E IH YSLIHDDLPSMD+ +RRGKPT H + E AI+AG+ LLTY+F++++ Sbjct: 74 AAVEMIHTYSLIHDDLPSMDDDDLRRGKPTSHKVFGEANAILAGDALLTYSFQLLAQMAP 133 Query: 137 QLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193 + D ++ L+ L G +GM+GGQ DI +D+ +D ++ I KTG L+ F+ Sbjct: 134 EDADAEVKLALINELARASGAEGMVGGQTADIEGEDKDLDLEELEYIHVHKTGKLLAFSV 193 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +GA+++ A ++ + L F +LG+ FQ+ DD+LD E Sbjct: 194 AAGALLSRAEESRLKSLNEFAHHLGLAFQIRDDILDLEG 232 >gi|296333415|ref|ZP_06875868.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675079|ref|YP_003866751.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149613|gb|EFG90509.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413323|gb|ADM38442.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str. W23] Length = 296 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 132/240 (55%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + S L K I+ L D L ++ Y+L GGK++R +V Sbjct: 1 MTNKITSFLAGRKKTIENQLSIYTENLD------MPDSLKKSMLYSLEAGGKRLRPLIVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H + E TA++A Sbjct: 55 AVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLA 114 Query: 120 GNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+GLLT +F++I+S + ++ R +L+ L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I + KT L+ F +GAI+A A + + E LR F ++GI FQ+ DD+LD E K Sbjct: 175 LESIHERKTAKLLSFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEK 234 >gi|238760656|ref|ZP_04621781.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236] gi|238701121|gb|EEP93713.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236] Length = 306 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 88/242 (36%), Positives = 132/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +L + +R++ L D + N L+ A+RY A+LGGK++R +LV Sbjct: 9 DFSQQLAAHQQRVNQALLDFIAPL-----PFGNSDLVEAMRYGAVLGGKRLRPYLVYATG 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F ++ AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ Sbjct: 64 QMFGLSPTNLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123 Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ +P + D R ++ L H G+ GM GGQ LD++ E I + Sbjct: 124 LQTLAFSILAQAPMPDVADKDRLSMIAELAHASGVAGMCGGQALDLEAEARQISLEDLER 183 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA A + L + E +G+ FQ+ DD+LD D + Sbjct: 184 IHRHKTGALIRAAVRLGAFAAGEQGRKALTLLDRYSEAIGLAFQVQDDILDVIGDTATIG 243 Query: 236 KK 237 K+ Sbjct: 244 KR 245 >gi|308048592|ref|YP_003912158.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799] gi|307630782|gb|ADN75084.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799] Length = 294 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 132/235 (56%), Gaps = 10/235 (4%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65 + L R++ L+ + + RLL A+RY LLGGK++R FLV ++ Sbjct: 3 TALSHYQTRVNAALERIFDDL-----PVTDPRLLDAMRYGTLLGGKRVRPFLVYATGTML 57 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + AA+ECIH YSLIHDDLP+MD+ ++RRG+PTVHI +DE TAI+AG+ L Sbjct: 58 GAKEDDLDSLAAAVECIHAYSLIHDDLPAMDDDHLRRGQPTVHIAFDEATAILAGDALQG 117 Query: 126 YAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182 A+E+++ + R ++ SL G QGM GGQ +D+ + I+ + + + Sbjct: 118 LAYELLAEAPLPAALEGNRIAMLRSLARASGYQGMCGGQAIDLASTGKRIELDALQQLHR 177 Query: 183 MKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +KTGAL+ A E G+ +A + ++ L + E +G+ FQ+ DD+LD D + Sbjct: 178 LKTGALIRSAVEMGSYGVADLATEHRDALLRYAEAIGLAFQVQDDILDITADTEQ 232 >gi|288801181|ref|ZP_06406636.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039] gi|288331792|gb|EFC70275.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039] Length = 325 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 12/223 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 + +L L S + + L I+Y+L +GGK+IR L+ L+ + + L V Sbjct: 5 NELLQILNQYIDSIVFDRKPASLYEPIKYSLSMGGKRIRPMLMLLTYQLYKNDPQSILPV 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 +A+E H Y+L+HDDL MDN +RRG+PTVH +++ TAI++G+ +L +A+++++ Sbjct: 65 ASALETYHNYTLLHDDL--MDNALLRRGQPTVHKKWNANTAILSGDSMLVFAYKLLAECN 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFA 192 + I + GQ D+ E + E++ + ++KT L+ + Sbjct: 123 VDKLKEVL------DLFTITALEIGEGQQYDMDFELRNDVAESEYIEMIRLKTSVLLACS 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GAI+A A + L FGE +G+ FQL DD LD D Sbjct: 177 MKIGAILAGAPSEDANNLYRFGELIGLAFQLQDDYLDVYGDSK 219 >gi|229086753|ref|ZP_04218919.1| Geranyltranstransferase [Bacillus cereus Rock3-44] gi|228696574|gb|EEL49393.1| Geranyltranstransferase [Bacillus cereus Rock3-44] Length = 297 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 82/233 (35%), Positives = 130/233 (55%), Gaps = 10/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L+E+ ++ L Q Q + L A+ Y+L GGK++R L+ Sbjct: 5 AFDAFLKESKAFVEEQLVRYANQL------QCPNVLREAMIYSLEAGGKRLRPLLLFATL 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G Sbjct: 59 QAFEKERELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118 Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAF+ +++ Q ++ + +L L L G +GM+ GQ+ D++ E ++ + Sbjct: 119 LLTYAFQAVTAYDHQDVQAETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLEREGLEY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I K KTG L+ +A +GAI+A A+ ++E+L F + +G+ FQ+ DD+LD E Sbjct: 179 IHKHKTGRLLEYAVLAGAILAGATPEQEEKLLAFAKYIGLAFQIRDDILDVEG 231 >gi|257452580|ref|ZP_05617879.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R] gi|317059120|ref|ZP_07923605.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R] gi|313684796|gb|EFS21631.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R] Length = 290 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 13/235 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67 ++ + + ++L Q + + ++YA L GGK+IR L+ SL Sbjct: 1 MKNYREYFNKRFGEVLTQYNT------PVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGK 54 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AA+E IH YSL+HDDLP+MDN RRG+ T H ++ E I+ G+ LLT A Sbjct: 55 ERDLGFPFAAALEMIHSYSLVHDDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNA 114 Query: 128 FEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184 F ++ + +++ + G+ GM+GGQ +D + I + I + K Sbjct: 115 FSVMVRGSIGKVPSEKILEIVALFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHK 174 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 TG L+ I+ AS ++E L +G+ +G+ FQ+ DD+LD E +L K Sbjct: 175 TGRLLLLPILVACILGDASLEQREALESYGKKIGLAFQIKDDILDVEGSFEELGK 229 >gi|298479711|ref|ZP_06997911.1| polyprenyl synthetase [Bacteroides sp. D22] gi|298274101|gb|EFI15662.1| polyprenyl synthetase [Bacteroides sp. D22] Length = 324 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L I Y L LGGK+IR L+ +L+ + + Sbjct: 6 QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++ Sbjct: 66 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQ 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ LD++ E + E + + ++KT L+ + Sbjct: 124 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A A+ + E L FG ++G+ FQL DDLLD D KK Sbjct: 178 KIGAILAGATAEDAENLYHFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224 >gi|228992926|ref|ZP_04152850.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442] gi|228766783|gb|EEM15422.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442] Length = 297 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 78/233 (33%), Positives = 132/233 (56%), Gaps = 10/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + ++E+ ++ L Q Q + L A+ Y+L GGK++R L+ Sbjct: 5 AFDAFVKESKTFVEEQLVRYANQL------QCPNVLREAMTYSLEAGGKRLRPLLLFATL 58 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G Sbjct: 59 QAFEKERELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118 Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLT+AF+++++ Q + + +L L L G +GM+ GQ+ D++ E ++ +++ Sbjct: 119 LLTHAFQVVTAYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I K KTG L+ +A +GA++A A+ ++++L F + +G+ FQ+ DD+LD E Sbjct: 179 IHKHKTGRLLEYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVEG 231 >gi|167624992|ref|YP_001675286.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] gi|167355014|gb|ABZ77627.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] Length = 293 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 87/207 (42%), Positives = 126/207 (60%), Gaps = 6/207 (2%) Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + +L +A+++ AL+GGK+IR FLV + V T AAIECIH YSLIHDDLP+ Sbjct: 28 DPQLKAAMKHGALIGGKRIRPFLVYAIGDMLGVKLTTLDSCAAAIECIHAYSLIHDDLPA 87 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRG+PTVHI +DE TAI+AG+ L AFEIIS P + + ++ +L + Sbjct: 88 MDDDALRRGQPTVHIAFDEATAILAGDALQALAFEIISDPIENITPSQNLAMVKALANAS 147 Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 G GM GGQ +D+ ++ I+ + + K+KTGAL+ A E I A E++ L Sbjct: 148 GYSGMCGGQAMDLSATNKQIELATLIKLHKLKTGALIRCAVEFAIIAAKVDGQERQALLD 207 Query: 213 FGENLGIIFQLADDLLDC---EEDLPK 236 F + +G+ FQ+ DD+LD E+L K Sbjct: 208 FADAIGLAFQVQDDVLDIIASTEELGK 234 >gi|310766823|gb|ADP11773.1| Geranyltranstransferase [Erwinia sp. Ejp617] Length = 299 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 122/229 (53%), Gaps = 10/229 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67 L + +R++ L + Q + L++A+ Y ALLGGK++R FLV + Sbjct: 7 LTSHYQRVNAALQGFISQL-----PFQSTPLVNAMEYGALLGGKRLRPFLVYATGDMLRA 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N AAIECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG+ L T A Sbjct: 62 NDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEEAAILAGDALQTLA 121 Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 F I++ P + R ++ L G+ GM GGQ LD+ E + ++ I + K Sbjct: 122 FSILADAPMPGVVAESRIAMLSELAQASGVAGMCGGQALDLAAEGKQVTLNELEQIHRHK 181 Query: 185 TGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232 TGAL+ A GA+ A + L F +G+ FQ+ DD+LD Sbjct: 182 TGALIRSAVRLGALTAGERGRAALPALDRFANAIGLAFQVQDDILDVTG 230 >gi|298385074|ref|ZP_06994633.1| polyprenyl synthetase [Bacteroides sp. 1_1_14] gi|298262218|gb|EFI05083.1| polyprenyl synthetase [Bacteroides sp. 1_1_14] Length = 324 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + + T+ + L I Y L LGGK+IR L+ +L+ + + Sbjct: 6 QLLDKINNHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE H ++L+HDDL MD +RRGKPTVH +++ TAI++G+ +L AF ++ Sbjct: 66 TGIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAP 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ LD++ E + E + + ++KT L+ + Sbjct: 124 EHLKEVIDLFSLT------ALEICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A AS + E L FG +G+ FQL DDLLD D KK Sbjct: 178 KIGAILAGASAVDAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKK 224 >gi|293373955|ref|ZP_06620297.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f] gi|292631176|gb|EFF49812.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f] Length = 342 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L I Y L LGGK+IR L+ +L+ + + Sbjct: 24 QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 83 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++ Sbjct: 84 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPP 141 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ LD++ E + E + + ++KT L+ + Sbjct: 142 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSL 195 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A A+ + E L FG ++G+ FQL DDLLD D KK Sbjct: 196 KIGAILAGATAEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKK 242 >gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01] gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01] Length = 307 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 81/237 (34%), Positives = 126/237 (53%), Gaps = 11/237 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 + L + L E + + ++ + + R+ A+R++L GGK++R L Sbjct: 12 SFDLKAFLTEYGRLVVAAMEKRIARY------PEESRVTQAMRHSLFAGGKRLRPILCMT 65 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A N + V AA+E IH YSLIHDDLP++D+ RRG PT H +DE TAI+AG Sbjct: 66 SAEAVGGNKDHVMDVAAALEFIHTYSLIHDDLPALDDDDYRRGTPTCHKAFDEATAILAG 125 Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 +GLLT AFEI+S L ++ ++H G GM+ GQMLDI+ E + + Sbjct: 126 DGLLTSAFEILSHAADDGLLPAEKVLTIIAGISHAAGCNGMILGQMLDIEGEHESLTREE 185 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + I KTGA++ + SGA + + + L + +N+G+ FQ+ DD+L+ D Sbjct: 186 LEDIHNNKTGAMIEVSVFSGAYLGGGTPEQIAALDVYAKNVGLAFQVIDDILNVIGD 242 >gi|124027425|ref|YP_001012745.1| geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM 5456] gi|123978119|gb|ABM80400.1| Geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM 5456] Length = 336 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 114/242 (47%), Gaps = 12/242 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M G LP + KR+ +++D + + D L IR GGK++R +V Sbjct: 1 MTGQLPESVVAYLKRVASLVDGYIYAKVKGEPKEVYDAGLHLIR---AGGKRLRPAIVVA 57 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A AL AA+E +H ++LIHDD+ MD RRG PTVH + E AI AG Sbjct: 58 IAEALGEPAERALPFAAAVELVHNFTLIHDDI--MDRDEFRRGVPTVHKVWGEPLAITAG 115 Query: 121 NGLLTYAFEIISSP---KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 + L AFE ++ R+ +LS + +G M + +DE + + Sbjct: 116 DLLFAKAFETLTDALDKGIPPDRVARATRVLSRASAVIAEGQAMDLMFEEEDE-VSIDEY 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234 ++ KTGAL + G ++A E+L FG+NLGI FQ+ DD+L EE+L Sbjct: 175 LIMIYKKTGALFEASAVLGGLVATGDDATLEKLAEFGKNLGIAFQIRDDILGIVGKEEEL 234 Query: 235 PK 236 K Sbjct: 235 GK 236 >gi|114566119|ref|YP_753273.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337054|gb|ABI67902.1| farnesyl-diphosphate synthase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 301 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 79/240 (32%), Positives = 128/240 (53%), Gaps = 7/240 (2%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN L +E +R +D+ L+ + + A+ YA+ GGK++R +V Sbjct: 1 MNFDLEHFQEEIRQR-KEFVDNCLIGCLLSPDSD-PPLIHQAMHYAIFNGGKRLRPIMVL 58 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E A + A+ V A+E IH YSL+HDDLP MD+ RRG+PT H + E A++ Sbjct: 59 EGAKIAGGEAEQAIPVACALEMIHSYSLVHDDLPCMDDDDFRRGQPTCHRVFGEANAVLT 118 Query: 120 GNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175 G+ LLT AFE++S + +K + +++ + G +GM+GGQ+LD++ E ID Sbjct: 119 GDALLTAAFELLSEKNSVSGIKPDTTLRVIAEIARASGSRGMIGGQILDLEAEGKIIDYE 178 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + +KTG L A +GAI+ + L + +N G+ FQ++DD+LD + D Sbjct: 179 SLRKLHCLKTGQLFRAALRTGAIVGGIGEKGLLALSDYADNFGLAFQISDDILDVQGDAA 238 >gi|332160732|ref|YP_004297309.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664962|gb|ADZ41606.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861141|emb|CBX71403.1| geranyltranstransferase [Yersinia enterocolitica W22703] Length = 306 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +L + +R++ L D + N L+ A+RY A+LGGK++R +LV Sbjct: 9 DFNQQLAAHQQRVNQALLDFIAPL-----PFGNSDLVEAMRYGAVLGGKRLRPYLVYATG 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F ++ + AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ Sbjct: 64 QMFGLSLTSLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P + D R ++ L H G+ GM GGQ LD+ E + Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIAELAHASGVAGMCGGQALDLAAESRQTTLDDLEK 183 Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A A L + +G+ FQ+ DD+LD D + Sbjct: 184 IHRHKTGALIRAAVRLGALAAGAPGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIG 243 Query: 236 KK 237 K+ Sbjct: 244 KR 245 >gi|90579835|ref|ZP_01235643.1| putative geranyltranstransferase [Vibrio angustum S14] gi|90438720|gb|EAS63903.1| putative geranyltranstransferase [Vibrio angustum S14] Length = 300 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 83/229 (36%), Positives = 121/229 (52%), Gaps = 10/229 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70 +R + +L + L Q + LL A++Y LLGGK+ R FL + V Sbjct: 14 YQQRSNDVLANWL-----STQPFADKALLKAMQYGTLLGGKRARPFLTYVTGEMLGVTQD 68 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI +DE AI+AG+ L T AF+I Sbjct: 69 DLDTPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIAFDEAIAILAGDALQTLAFDI 128 Query: 131 ISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGA 187 +++ + N R ++ L G GM GQ LD + + + Q+ +I + KTGA Sbjct: 129 LANGQLSQDGNTQRIAMVSELAKASGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGA 188 Query: 188 LMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ A GA+ A +L + E +G+ FQ+ DD+LD D Sbjct: 189 LIRCAVRLGALAAGDKGVAILPQLDKYAEAIGLAFQVQDDILDVISDTE 237 >gi|325109156|ref|YP_004270224.1| polyprenyl synthetase [Planctomyces brasiliensis DSM 5305] gi|324969424|gb|ADY60202.1| Polyprenyl synthetase [Planctomyces brasiliensis DSM 5305] Length = 314 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 87/251 (34%), Positives = 128/251 (50%), Gaps = 31/251 (12%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64 S +++ I LD A+ DRL A RY+LL GGK++R LV A Sbjct: 5 SSYVEQFQTLIKEELDR-----AAQFTADCPDRLSEASRYSLLAGGKRLRPLLVLLSAQA 59 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + L AIE +H YSLIHDDLP+MD+ +RRG+PT H Q+DE TAI+AG+GLL Sbjct: 60 CSGKPEPGLPAALAIEMVHTYSLIHDDLPAMDDDDLRRGRPTCHRQFDEATAILAGDGLL 119 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------------ 172 T AFE +++ + + +L L+ G++GM+GGQ D+ E Sbjct: 120 TRAFETLAA--GIVDPATAVRCVLELSRASGVEGMVGGQQADLDAEKRFEQIESKSSEET 177 Query: 173 -----------DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221 + Q+ I + KTG L+ A GAI+ A + + + +G+ +G+ F Sbjct: 178 AENPAEPSDEAELQQLKAIHRRKTGKLITCAVRMGAILGGADDAQLDAITRYGDAIGLAF 237 Query: 222 QLADDLLDCEE 232 Q+ DD+LDC Sbjct: 238 QVMDDILDCTS 248 >gi|23099332|ref|NP_692798.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831] gi|22777561|dbj|BAC13833.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831] Length = 294 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 86/239 (35%), Positives = 134/239 (56%), Gaps = 10/239 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L L+ ++++ + SH+ +N L ++ Y+L GGK++R L+ Sbjct: 1 MNENLQRYLEIYREKLEATYNTYF----SHLDIPNN--LKESMLYSLNAGGKRLRPILIL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 ++ + AIE IH YSLIHDDLP+MD+ RRGK T H Q++E TAI+A Sbjct: 55 ASYEVYGKTLDKVMSSAVAIEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKQFNEATAILA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 G+ LLTY+F++ISS D + +L+ L+ G GM+ GQ+LD++ E + ++ Sbjct: 115 GDALLTYSFQLISSDDLLTSDE-KVELIRILSEASGPAGMVAGQILDMEAEKQAVTLEEM 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I +KTG L+ FA +GA + A+ N+ + L + LG+IFQ+ DD+LD D K Sbjct: 174 EEIHALKTGELIRFAIIAGAYLGGATDNQLKHLTDYAYYLGLIFQVQDDILDITGDASK 232 >gi|220931495|ref|YP_002508403.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168] gi|219992805|gb|ACL69408.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168] Length = 296 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 85/244 (34%), Positives = 138/244 (56%), Gaps = 13/244 (5%) Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58 MN + L + + ++++L +++ + + L+ A++Y+L GGK++R L Sbjct: 1 MNQVNIKEILTQYTSEVNSVLKEIMNIEKNALAPG----LVKAMKYSLFSGGKRLRPILT 56 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 A + + + +ALRVGA+IE +H YSLIHDDLPSMD+ RRGKP+ H + TAI+ Sbjct: 57 LMVAEMLDGDRDSALRVGASIELVHTYSLIHDDLPSMDDDDFRRGKPSNHKVFGTATAIL 116 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 AG+ LLT+AF I+S L + +++ ++ G GM+GGQ+LD +D+ I + Sbjct: 117 AGDALLTFAFNILSKLN--LPPDKVLKIIEVISQGAGHNGMVGGQVLDLEAEDKEISLEE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233 + I KTGAL + +GA A+ + E L + LG+ FQ+ DD+LD + Sbjct: 175 LKKIHSGKTGALFKSSILAGAYCANPDRTELTALERYARYLGLTFQIVDDILDVTGNEEV 234 Query: 234 LPKK 237 L K+ Sbjct: 235 LGKR 238 >gi|29347468|ref|NP_810971.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|29339368|gb|AAO77165.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron VPI-5482] Length = 324 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 15/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ + L I Y L LGGK+IR L+ +L+ + + Sbjct: 6 QLLDKINNHLSEIQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE H ++L+HDDL MD +RRGKPTVH +++ TAI++G+ +L AF ++ Sbjct: 66 TGIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAP 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ LD++ E + E + + ++KT L+ + Sbjct: 124 EHLKEVIDLFSLT------ALEICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A AS + E L FG +G+ FQL DDLLD D KK Sbjct: 178 KIGAILAGASAADAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKK 224 >gi|308069598|ref|YP_003871203.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus polymyxa E681] gi|305858877|gb|ADM70665.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase) [Paenibacillus polymyxa E681] Length = 307 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 78/233 (33%), Positives = 120/233 (51%), Gaps = 6/233 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 +E ++ L++ L ++ Y+L GGK++R LV A F Sbjct: 13 FKEYLTGTTDVVSSALIEQFP-ADWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGG 71 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AL V A+E +H YSLIHDDLP+MD+ RRGK T H Y E A++AG+ LLT+A Sbjct: 72 SREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHA 131 Query: 128 FEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183 F I + + + ++ L+ G +GM+GGQ+ D+ E ++ I Sbjct: 132 FYSIVQAGRRHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIEELEFIHLH 191 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT L+ F+ +G + A +++ E LR FG +LG+ FQ+ DD+LD D K Sbjct: 192 KTADLIIFSLLAGGRIGGADKSQLEALRRFGRDLGLAFQIQDDILDLIGDESK 244 >gi|237713977|ref|ZP_04544458.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262407029|ref|ZP_06083578.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646605|ref|ZP_06724237.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a] gi|294809763|ref|ZP_06768447.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b] gi|229445801|gb|EEO51592.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355732|gb|EEZ04823.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638047|gb|EFF56433.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a] gi|294443003|gb|EFG11786.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b] Length = 324 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L I Y L LGGK+IR L+ +L+ + + Sbjct: 6 QLLDKINHHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++ Sbjct: 66 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQ 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ LD++ E + E + + ++KT L+ + Sbjct: 124 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A A+ + E L FG ++G+ FQL DDLLD D KK Sbjct: 178 KIGAILAGATAEDAENLYHFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224 >gi|288940506|ref|YP_003442746.1| polyprenyl synthetase [Allochromatium vinosum DSM 180] gi|288895878|gb|ADC61714.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180] Length = 297 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 10/239 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 + L + R++T LD +L + RL A+RY L GGK+IR L Sbjct: 3 DHTLDDFRARCAARVETALDQILPPV-----SVQPSRLHEAMRYTVLAGGKRIRPLLAYA 57 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 ++ A+E IH YSLIHDDLP+MD+ +RRG+PT H +DE TAI+AG Sbjct: 58 AGEALGLDAALLDHPACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAG 117 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + L T AF+ ++ L R ++ +L G +GM+GGQ +D++ E +D Q+ Sbjct: 118 DALQTLAFQALAEA-PGLSAESRVAMVSALARASGARGMVGGQAMDLEAEGTPLDLVQLE 176 Query: 179 MIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ + + G + ++ ERL + + LG+ FQ+ DD+LD E D + Sbjct: 177 NIHIHKTGALIRVSVQMGVLAHGGLDADKAERLDHYAKCLGLAFQIQDDVLDVEGDTAQ 235 >gi|55821223|ref|YP_139665.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus LMG 18311] gi|55823135|ref|YP_141576.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus CNRZ1066] gi|55737208|gb|AAV60850.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus LMG 18311] gi|55739120|gb|AAV62761.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus CNRZ1066] Length = 290 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 83/228 (36%), Positives = 126/228 (55%), Gaps = 10/228 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-H 69 K+ID + D + + + L+ AI Y++ GGK+IR + + F + Sbjct: 3 KLKKIDAAIRDFYQKKTPPVSSD----LIIAILYSVDSGGKRIRPLIFLDLLEGFGLELT 58 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + V A++E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L F Sbjct: 59 PSHFDVAASLEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDPFA 118 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGA 187 +++ T+L IR QL+ +L+H G GM+GGQMLD++ E + D +Q+ I + KTG Sbjct: 119 LVAQ--TELSAEIRVQLIHALSHASGTFGMVGGQMLDMKGEGLELDLSQLAKIHENKTGK 176 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ F + I+A E L+ G +G+ FQ+ DD+LD D Sbjct: 177 LLTFPFVAAGIVAQQEDRVMENLQEAGRLIGLAFQVRDDILDVTADFE 224 >gi|222151415|ref|YP_002560571.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402] gi|222120540|dbj|BAH17875.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402] Length = 290 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 5/212 (2%) Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82 + + S + + + RL ++ Y+L GGK+IR V N + L G A+E I Sbjct: 15 IEEVISGLYSAKDGRLFDSMHYSLSAGGKRIRPLFVLTTIDSLGGNAVDGLSFGVALEMI 74 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H YSLIHDDLP+MDN RRGK T H +DE TAI+AG+ LLT +F +I+ K +I Sbjct: 75 HTYSLIHDDLPAMDNDDYRRGKLTNHKHFDEATAILAGDALLTDSFRMITEGK--FDADI 132 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA 200 + L+ L+ G +GM+ GQMLD++ E ++ Q+ + KTG L+ A + I+ Sbjct: 133 KLPLISLLSEAAGSKGMVYGQMLDMEGEHQALELNQMEQVHSYKTGELIRAAFVAAGIIM 192 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + + L G N+G++FQ+ DD+LD E Sbjct: 193 KLTDEKIQLLDQIGRNVGLMFQIQDDILDVEG 224 >gi|119775569|ref|YP_928309.1| geranyltranstransferase [Shewanella amazonensis SB2B] gi|119768069|gb|ABM00640.1| farnesyl-diphosphate synthase [Shewanella amazonensis SB2B] Length = 293 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 94/231 (40%), Positives = 130/231 (56%), Gaps = 8/231 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L L + R+D +L + Q L +A+R+ AL+GGK+IR FLV Sbjct: 2 LKLALADCQSRVDAVLAAHIDAL-----PQTAPALKAAMRHGALIGGKRIRPFLVYAVGE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L V+ R+ AA+EC+H YSLIHDDLP+MD+ +RRGKPTVHI +DE TAI+AG+ L Sbjct: 57 LLGVDKAKLDRLAAAVECVHAYSLIHDDLPAMDDDNLRRGKPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 T AFEIIS L + ++ +L G GM GGQ LD+ E I ++ + Sbjct: 117 QTLAFEIISESDAGLAPKAQVAMIAALARASGYLGMCGGQALDLAGEGKSISLDELTRLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTGAL+ A E I A AS + LR + + +G+ FQ+ DD+LD Sbjct: 177 NLKTGALIRAAVELALIAADASDADTAALRAYADAIGLAFQVQDDILDITA 227 >gi|291287805|ref|YP_003504621.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290884965|gb|ADD68665.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 299 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 + S L+ +++ + + ++ L+ A+RY+L GGK++R LV Sbjct: 4 FNMQSYLKFWGAKVEEFFETYVA-----CPDENVKGLVDAMRYSLFAGGKRLRPALVFSS 58 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +F A AA+E +H YSLIHDDLP+MD+ RRGKPT H Y E TAI+AG+ Sbjct: 59 YGVFEGYFDKATPFAAAVEMLHTYSLIHDDLPAMDDDDYRRGKPTNHKMYGEATAILAGD 118 Query: 122 GLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 GLLT AFE++ + ++ + L G +GM+GGQ D++ E + V Sbjct: 119 GLLTKAFEVMCNAEINPDVEPAQMLEAAYKLADAAGDRGMVGGQFTDMEAEDGVFNSATV 178 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234 I KT L+ + CE GAI+ S+++K+R+R +G +G+ FQ+ DD+LD E+L Sbjct: 179 DFIHMNKTSRLISYCCELGAILGFGSEDDKKRMREYGIRIGLAFQIVDDILDIASTTEEL 238 Query: 235 PK 236 K Sbjct: 239 GK 240 >gi|187478668|ref|YP_786692.1| geranyltranstransferase [Bordetella avium 197N] gi|115423254|emb|CAJ49787.1| geranyltranstransferase [Bordetella avium 197N] Length = 303 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 16/237 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66 L + + I+ +L+ L+ RL A+RYA+LGG K++R+ LV Sbjct: 11 WLHDRALHIEQVLETLMPAADIA-----PARLHEAMRYAVLGGGKRVRAALVYAAGQACP 65 Query: 67 VN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 VN + R AA+E IH YSL+HDDLP MD+ +RRG+PT H+Q+DE TA++AG Sbjct: 66 VNSSLLAIEASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAG 125 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178 + L AFE+++ + + Q L G GM GGQ +D+ + + ++ Sbjct: 126 DALQPLAFELLA--GMPIAPALVVQATQVLARAAGSLGMAGGQAIDLHSVGKRLTRDELQ 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + MKTGA++ + G ++A AS ++ L + + +G+ FQ+ DD+LD D Sbjct: 184 TMHSMKTGAMLAASVTLGGVVAGASSAVRQALDAYAQAVGLAFQVVDDILDVTADSA 240 >gi|123443361|ref|YP_001007335.1| geranyltranstransferase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090322|emb|CAL13188.1| geranyltranstransferase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 306 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +L + +RI+ L D + + L+ A+RY A+LGGK++R +LV Sbjct: 9 DFNQQLAAHQQRINQALLDYIAPL-----PFGSSDLVEAMRYGAVLGGKRLRPYLVYATG 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F ++ + AAIEC+H YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ Sbjct: 64 QMFGLSLTSLDAPAAAIECVHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P ++ D R ++ L + G+ GM GGQ LD++ E I ++ Sbjct: 124 LQTLAFSILAEAPMPEVADKDRLSMIAELAYASGVAGMCGGQALDLEAEARQITLDELER 183 Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A AS L + +G+ FQ+ DD+LD D + Sbjct: 184 IHRHKTGALIRAAVRLGALAAGASGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIG 243 Query: 236 KK 237 K+ Sbjct: 244 KR 245 >gi|282859641|ref|ZP_06268743.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010] gi|282587559|gb|EFB92762.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010] Length = 324 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 74/221 (33%), Positives = 112/221 (50%), Gaps = 12/221 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 + ILD + A+ + L I+Y L LGGK+IR L+ +L+ N L Sbjct: 5 EEILDKVNQYIANLAYEREPKSLYEPIKYVLSLGGKRIRPVLMLLAYNLYKDNPEDILAQ 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 +E H Y+L+HDDL MDN +RRG TVH +++ AI++G+ +L AFE I+S Sbjct: 65 ACGLETYHNYTLLHDDL--MDNAPLRRGHQTVHEKWNANAAILSGDTMLVLAFERIAS-- 120 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 + L + + GQ LD++ E + E + + ++KT L+ A Sbjct: 121 ----GDPAQLKALLNLFTVTALEIGEGQQLDMEFEHRNDVTEAEYIEMIRLKTSVLLACA 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GAI+A AS+ + L FGE +G+ FQL DD LD D Sbjct: 177 LKMGAILAEASEEDARNLYIFGEKIGLAFQLQDDYLDVYGD 217 >gi|226942935|ref|YP_002798008.1| geranyltranstransferase [Azotobacter vinelandii DJ] gi|226944165|ref|YP_002799238.1| geranyltranstransferase [Azotobacter vinelandii DJ] gi|226717862|gb|ACO77033.1| geranyltranstransferase [Azotobacter vinelandii DJ] gi|226719092|gb|ACO78263.1| geranyltranstransferase [Azotobacter vinelandii DJ] Length = 295 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 79/236 (33%), Positives = 130/236 (55%), Gaps = 10/236 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + ++ R+D L+ LL + +Q RL A+RY+++ GGK++R LV Sbjct: 2 IAAYQKQCQARVDAALEALLQPPRAELQ-----RLYQAMRYSVVNGGKRVRPLLVYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGTPERAEGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180 AFE+++ P+ +D +R ++ +L G GM+GGQ +D++ +D + + Sbjct: 117 QALAFEVLTDPRRNPRDAGLRLEMSRTLARAAGPAGMVGGQAIDLEAVGRRLDRDALETM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ + GA+ + A + + L + +G+ FQ+ DD+LD E D Sbjct: 177 HRHKTGALIEASVRLGALASGRADETDLAALAVYARAIGLAFQVQDDILDVESDTA 232 >gi|323488929|ref|ZP_08094166.1| geranyltranstransferase [Planococcus donghaensis MPA1U2] gi|323397321|gb|EGA90130.1| geranyltranstransferase [Planococcus donghaensis MPA1U2] Length = 293 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 85/235 (36%), Positives = 138/235 (58%), Gaps = 10/235 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFN 66 L + + ++ + Q + D L ++ Y+L GGK+IR L+ + Sbjct: 3 LTQFRSHYEPLIQQEMAQLILSLSI--PDSLKESMHYSLQAGGKRIRPILLLAVLHEMTG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 H AL+V AAIE IH YSLIHDDLPSMD+ +RRG PT H + E AI+AG+ LLTY Sbjct: 61 KEHPDALKVAAAIEMIHTYSLIHDDLPSMDDDDLRRGMPTNHKVFGEAVAILAGDALLTY 120 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 +F +++ + + + + +L+ ++ + G +GM+GGQ+LDI+ E + ++ + ++K Sbjct: 121 SFGVVARLE-HVSSDDKVRLIDLMSVSAGAEGMVGGQVLDIEGEEKQLQLEELEQVHRLK 179 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 TGAL+ F+ +G I+A A+ +E L FG++LG+ FQ+ DD+LD +L K Sbjct: 180 TGALLTFSILAGGILAQATNDEIIALSQFGQHLGLAFQIQDDILDVTGTSQELGK 234 >gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii] Length = 334 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 7/223 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75 T++ D+ + + ++ +++ A+RY++L G K+ + LF N L A Sbjct: 49 TLIVDINQKLDEAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGGNRLAAFPT 108 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133 A+E +H SLIHDDLP MD+ RRG P H + AI+AG+ L F+ I S Sbjct: 109 ACALEMVHAASLIHDDLPCMDDDTTRRGLPANHTVFGVDMAILAGDALFPLGFQHIVSHT 168 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 P + ++ +++ + +G GM GQ LD++ V +Q+ K G + + Sbjct: 169 PSDLVPEDRILRVITEIARAVGSTGMAAGQFLDLEG---GPNAVDFVQEKKYGEMGECSA 225 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 GA++A AS E + +R +G +G+++++ DD+L+ ++ K Sbjct: 226 VCGALLAGASDEEIQHMRKYGRAVGVLYRVVDDILEAKKTEDK 268 >gi|254671578|emb|CBA09234.1| geranyltranstransferase [Neisseria meningitidis alpha153] Length = 298 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 81/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G Sbjct: 59 ASELGGTVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178 + L T AF++++ P + L + + ++ L G +GM GGQ +D+ + + + Sbjct: 119 DALQTQAFDVLARP-SGLPASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|327314324|ref|YP_004329761.1| polyprenyl synthetase [Prevotella denticola F0289] gi|326945935|gb|AEA21820.1| polyprenyl synthetase [Prevotella denticola F0289] Length = 324 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 17/229 (7%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D ILD + + + L IRY L LGGK+IR L+ +LF + T L Sbjct: 5 DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E H Y+L+HDDL MD+ +RRG+ TVH+++D TAI++G+ +L AFE + Sbjct: 65 ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCD 122 Query: 136 T-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191 L+D +R + + GQ D++ E + E + + ++KT L+ Sbjct: 123 DRHLRDVLRL-------FTVTALEIGEGQQYDMEFENRNDVTEAEYIEMIRLKTSVLLAC 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 A + GA++A A + E L FGE +G+ FQL DD LD D KK Sbjct: 176 AVKLGALLADAPAGDVENLYKFGERIGLAFQLQDDYLDVYGDPKVFGKK 224 >gi|59711319|ref|YP_204095.1| geranyltranstransferase [Vibrio fischeri ES114] gi|59479420|gb|AAW85207.1| geranyltranstransferase [Vibrio fischeri ES114] Length = 301 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 88/244 (36%), Positives = 130/244 (53%), Gaps = 18/244 (7%) Query: 1 MNGGLPSKLQ----ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55 M L +L N ++++ L+ + +Q L A++Y+LL GGK+ R Sbjct: 4 MTDSLKQQLTFFQNRNIEQLNQWLEKIEIQQ---------QPLTEAMKYSLLLGGKRARP 54 Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115 +LV A + + A AAIEC+H YSLIHDDLP+MDN +RRG T HI+YDE T Sbjct: 55 YLVYITAQMLGIKAEFADSAAAAIECVHSYSLIHDDLPAMDNDDLRRGHATCHIKYDEAT 114 Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172 AI+AG+ L T AFEI+++ + R ++ L+ G GM GQ LD+Q E + Sbjct: 115 AILAGDALQTLAFEILANGQLSDDAETSRIDMIRVLSKASGASGMCMGQSLDLQAEGKKV 174 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCE 231 D + I KTGAL+ A + GA+ A + +L + + +G+ FQ+ DD+LD Sbjct: 175 DLASLERIHANKTGALIKCAVQLGALCAGDKGKAILPQLEIYADAIGLAFQVQDDILDII 234 Query: 232 EDLP 235 D Sbjct: 235 SDTE 238 >gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis] Length = 306 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 7/219 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRV 75 T++ ++ + + Q+ + + A+RY++L K+ + LF N L A Sbjct: 20 TLISEINQKLDQAIPIQYPEEIYEAMRYSVLAKRTKRAPPVMCIAACELFGGNRLAAFPT 79 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133 A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG+ L F I S Sbjct: 80 ACALEMVHAASLIHDDLPCMDDAPSRRGQPSNHAVYGVDKAILAGDALFPLGFRHIVSNT 139 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 P + + +++ + +G GM GQ LD++ +Q+ K G + + Sbjct: 140 PSDLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEG---SLNSAEFVQEKKYGEMGECSA 196 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G ++A A +E +RLR +G +G+++++ DD+L+ + Sbjct: 197 VCGGLLAGAEDDEIQRLRRYGRAVGVLYKVIDDVLEAKS 235 >gi|325205345|gb|ADZ00798.1| geranyltranstransferase [Neisseria meningitidis M04-240196] Length = 298 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 81/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G Sbjct: 59 ASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178 + L T AF++++ P + L + + ++ L G +GM GGQ +D+ + + + Sbjct: 119 DALQTQAFDVLARP-SGLPASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|73662542|ref|YP_301323.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495057|dbj|BAE18378.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 295 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 84/237 (35%), Positives = 126/237 (53%), Gaps = 12/237 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 + K++ ++ ++ +L + + ++ N L ++RY+L GGK+IR L+ Sbjct: 2 MNKKMEHLTEEVNQLLSETIPN------SKLNTNLEESMRYSLEAGGKRIRPVLLLLTLE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A+E IH YSLIHDDLP MDN RRGK T H + E AI+AG+ L Sbjct: 56 MLTDQYKKGFSSALALEMIHTYSLIHDDLPPMDNDDYRRGKLTNHKVFGEWKAILAGDAL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFM 179 LT AF++I + + L D + +L+ L+ G GM+GGQ LD+Q E ID + Sbjct: 116 LTKAFDMIVNDDS-LNDVAKVKLIKRLSFASGHLGMVGGQTLDMQSEGAETNIDLDTLEK 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTGAL+ FA + +A L + E+LG++FQ+ DDLLD D K Sbjct: 175 IHNAKTGALLKFAVMAAVDIAEPENEVSNALESYSEHLGLMFQIKDDLLDIYGDEAK 231 >gi|213962451|ref|ZP_03390713.1| polyprenyl synthetase [Capnocytophaga sputigena Capno] gi|213954777|gb|EEB66097.1| polyprenyl synthetase [Capnocytophaga sputigena Capno] Length = 322 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 14/230 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K ++ + L S + + L +RY L LGGK++R L LF+ ++ A Sbjct: 2 KTVEQYREAFLDHLNSKLFVKEPRNLYEPMRYILQLGGKRLRPILTLIATDLFDADYHKA 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L AIE H +SL+HDD+ MD +RRG+ TVH +++ AI++G+ +L A++++ Sbjct: 62 LNAAMAIEMFHNFSLVHDDI--MDKASLRRGETTVHKKWNTNIAILSGDAMLVKAYQLLD 119 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALM 189 + + +L+ + + GQ D+ E E + + KT L+ Sbjct: 120 DYPSDVFS------LLTKILSRTALKVCEGQQWDMDFETQTEVSIPDYLQMIRYKTAVLI 173 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237 A + G I+A+AS + + FGE LG+ FQL DD LD D K+ Sbjct: 174 GAALQMGVIIANASPENQMPIYTFGEELGLAFQLQDDYLDAFGDESFGKR 223 >gi|83312002|ref|YP_422266.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] gi|82946843|dbj|BAE51707.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] Length = 301 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 105/238 (44%), Positives = 151/238 (63%), Gaps = 8/238 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M+ L L S+ +++ LD LL + S + R+ A+RY L GGK++R FLV Sbjct: 6 MSPRLTEALTVVSQAVNSELDRLLPVSESP-----DSRVHEAMRYVTLDGGKRLRPFLVM 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + ASLFNV A+RV AIE IHCYSL+HDDLP MD+ +RRG+PT H +DE TA++A Sbjct: 61 QSASLFNVAESAAIRVACAIEMIHCYSLVHDDLPCMDDDDLRRGRPTCHKAFDEATALLA 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--V 177 G+ LLT AFE++ +P T +R +L+ L H G QGM+GGQM+D+Q +D + Sbjct: 121 GDALLTKAFEVLVNPATHADPAVRCELVADLAHASGGQGMVGGQMIDLQAHTLDLDVAGI 180 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q++KTG L F+CE+GA++ A + LR + +LG+ FQ+ADD+LD E D+ Sbjct: 181 TRLQQLKTGRLFSFSCEAGAVLGKAHGELRLALRNYAHDLGLAFQIADDILDVEGDVA 238 >gi|255691323|ref|ZP_05414998.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565] gi|260622965|gb|EEX45836.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565] Length = 324 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 15/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + A T+ L + Y L LGGK+IR L+ +L+ + + Sbjct: 6 QLLDKINKYIADIQFTRTPKGLYEPVEYTLSLGGKRIRPVLMLMAYNLYREDVASIYEPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AAIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF +++ Sbjct: 66 AAIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTACPA 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 + + L+ + + GQ LD++ E + E + + ++KT L+ + Sbjct: 124 EHLKEVMDLFSLT------MLEICEGQQLDMEFESRGDVTEDEYIEMIRLKTAVLLAGSL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A A+ + E L FG +G+ FQL DDLLD D KK Sbjct: 178 KIGAILAGATAEDAENLYKFGMQIGVAFQLQDDLLDVYGDPEVFGKK 224 >gi|295084865|emb|CBK66388.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens XB1A] Length = 324 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L I Y L LGGK+IR L+ +L+ + + Sbjct: 6 QLLDKINHHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++ Sbjct: 66 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQ 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ LD++ E + E + + ++KT L+ + Sbjct: 124 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A A+ + E L FG ++G+ FQL DDLLD D KK Sbjct: 178 KIGAILAGATAEDSENLYHFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224 >gi|119474634|ref|ZP_01614987.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143] gi|119450837|gb|EAW32070.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143] Length = 309 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 92/247 (37%), Positives = 143/247 (57%), Gaps = 13/247 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN----DRLLSAIRYALL-GGKKIRS 55 MN + L + R+D +L + L +S + RL A+ Y+L+ GGK+IR Sbjct: 1 MNHDFSAFLMQTKTRVDQLLGEHLGSFSSSYAAVDSGIYLTRLQQAMHYSLINGGKRIRP 60 Query: 56 FLVTECASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110 LV A+ + + R+ +IE IH YSLIHDDLP+MD+ +RRG+PT H Sbjct: 61 VLVYATAAAITTDVSPVVTANLDRIACSIEMIHAYSLIHDDLPAMDDDDLRRGQPTCHRA 120 Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-- 168 +DE TAI+AG+ L AFE+++ T+ +I L+ LT G +GM+GGQ++D++ Sbjct: 121 FDEATAILAGDALQARAFELLTEL-TECPPHIHLNLLRILTQASGQRGMVGGQLIDLESV 179 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D+ ID Q+ I ++KTGAL+ + GA + A + + E+L C+G+ +G+ FQ+ DD+L Sbjct: 180 DKPIDVQQLETIHRLKTGALIRASIAMGATLTGADRQQLEQLDCYGDAIGLAFQVHDDIL 239 Query: 229 DCEEDLP 235 D E D Sbjct: 240 DIEADTA 246 >gi|184155736|ref|YP_001844076.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956] gi|227515672|ref|ZP_03945721.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931] gi|260663547|ref|ZP_05864437.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN] gi|183227080|dbj|BAG27596.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956] gi|227085975|gb|EEI21287.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931] gi|260552088|gb|EEX25141.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN] Length = 291 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 124/229 (54%), Gaps = 10/229 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECASLFN 66 + + + ++DD L A+H+ + LL ++ Y+LL GGK++R L A L Sbjct: 1 MARQLQELVAVVDDYL---ATHLAGACDQPLLEKSMAYSLLAGGKRLRPTLTIAVAELLG 57 Query: 67 VN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 +R A+E IH YSLIHDDLP+MDN +RRGKPT H Y A +AG+GLLT Sbjct: 58 KTIDDDLVRAACALELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVYGPGVATLAGDGLLT 117 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM 183 AFE +S QLK +R +L+ L G GM+ GQ D+ + + Q+ + + Sbjct: 118 LAFEWVSD--NQLKAPVRLRLVQELAKAAGPAGMVAGQATDVSATGQELSLAQLKKLHRQ 175 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTGAL+ +A +G ++A + L FGE G+ FQ+ DD+LD Sbjct: 176 KTGALLRYAVLAGGLIAEQETAVLDCLTTFGEAYGLAFQIYDDILDVTA 224 >gi|257466439|ref|ZP_05630750.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|315917595|ref|ZP_07913835.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563] gi|313691470|gb|EFS28305.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563] Length = 290 Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 13/235 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67 ++ + + ++L Q + + ++YA L GGK+IR L+ SL Sbjct: 1 MKNYREYFNKRFGEVLTQYNT------PVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGK 54 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AA+E IH YSL+HDDLP+MDN RRG+ T H ++ E I+ G+ LLT A Sbjct: 55 ERDLGFPFAAALEMIHSYSLVHDDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNA 114 Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184 F +I ++ +++ + G+ GM+GGQ +D + I + I + K Sbjct: 115 FSVMIRGSMGKVAAEKILEIVALFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHK 174 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 TG L+ I+ AS ++E L +G+ +G+ FQ+ DD+LD E +L K Sbjct: 175 TGRLLLLPILVACILGDASLEQREALESYGKKIGLAFQIKDDILDVEGSFEELGK 229 >gi|190893863|ref|YP_001980405.1| geranyltranstransferase [Rhizobium etli CIAT 652] gi|190699142|gb|ACE93227.1| geranyltranstransferase protein [Rhizobium etli CIAT 652] Length = 327 Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 118/236 (50%), Positives = 167/236 (70%), Gaps = 3/236 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++L+ N++ I+ +LD LLL A + + L A+ YA+L GGK++R FLV E Sbjct: 29 DTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPFLVVES 88 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+L + ALR+GAA+EC+HCYSL+HDDLP+MD+ IRRGKPTVH+++DE TAI+AG+ Sbjct: 89 AALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDIRRGKPTVHVKFDEATAILAGD 148 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179 LLTYAF+I+++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + Sbjct: 149 SLLTYAFDIVAAPETALPDTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 208 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD D Sbjct: 209 LQAMKTGALIRFACEAGAILAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDAA 264 >gi|313905343|ref|ZP_07838709.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6] gi|313469813|gb|EFR65149.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6] Length = 298 Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 76/246 (30%), Positives = 122/246 (49%), Gaps = 17/246 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN + Q+ + I+ L + + +L A+ Y+ L GGK+IR L+ Sbjct: 1 MN--FDEEFQKRKAEAEEIVCRYLPD-----EKEVPGKLTEAMNYSMLAGGKRIRPVLML 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E + + AAIE IH +SL+HDDLP++D+ RRGK T H + ++A Sbjct: 54 ESYRMCGGDAAVVEPFMAAIEMIHTHSLVHDDLPAIDDDEFRRGKKTTHAAFGAALGVLA 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF-----ID 173 G+ LL YA+E + +D + ++ + L G+ GMLGGQ +D+++E ++ Sbjct: 114 GDALLNYAYETAMTAFDCCQDPAKVARALRVLAQKTGIGGMLGGQSVDVENEKNGVFQLE 173 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-- 231 + I KT AL+ GAI+A A + ++ G G+ FQ+ADD+LD Sbjct: 174 RKTIDYIYVNKTAALLEAPLMIGAILAGADEKTVSAMQEIGHRAGLAFQIADDVLDVTST 233 Query: 232 -EDLPK 236 E+L K Sbjct: 234 LEELGK 239 >gi|303232200|ref|ZP_07318903.1| putative geranyltranstransferase [Veillonella atypica ACS-049-V-Sch6] gi|302513306|gb|EFL55345.1| putative geranyltranstransferase [Veillonella atypica ACS-049-V-Sch6] Length = 292 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 84/238 (35%), Positives = 123/238 (51%), Gaps = 12/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L+ + + I+ L +L + RL ++ Y+LL GGK+IR L Sbjct: 2 LKTYLETSKQSIEHWLSAVL-----NSPIPEYKRLYESMNYSLLQGGKRIRPILTKAVLD 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 V+ A+ECIH YSLIHDDLP+MDN RRG T H Y + AI+AG+GL Sbjct: 57 AMKVDASLYKEFLCALECIHTYSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 LTYAF++ S T + + + L G +GM+GGQ D+ E I ++ ++ Sbjct: 117 LTYAFQLCSE-NTTASAEQKIKAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KTGAL A E G I+++A Q + + LG++FQ+ DD+LD +L K Sbjct: 176 SGKTGALFNAAIELGLILSNADQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGK 233 >gi|325858516|ref|ZP_08172620.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A] gi|325483013|gb|EGC86002.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A] Length = 324 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 17/229 (7%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D ILD + + + L IRY L LGGK+IR L+ +LF + T L Sbjct: 5 DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E H Y+L+HDDL MD+ +RRG+ TVH+++D TAI++G+ +L AFE + Sbjct: 65 ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCD 122 Query: 136 T-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191 L+D +R + + GQ D++ E + E + + ++KT L+ Sbjct: 123 DRHLRDVLRL-------FTVTALEIGEGQQYDMEFENRNDVTEAEYIEMIRLKTSVLLAC 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 A + GA++A A + E L FGE +G+ FQL DD LD D KK Sbjct: 176 AVKLGALLADAPAGDVENLYKFGERIGLAFQLQDDYLDVYGDPKVFGKK 224 >gi|282916792|ref|ZP_06324550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139] gi|283770598|ref|ZP_06343490.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19] gi|282319279|gb|EFB49631.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139] gi|283460745|gb|EFC07835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19] Length = 293 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 94/224 (41%), Positives = 137/224 (61%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + ++ Sbjct: 7 NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+ISS Sbjct: 67 SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L D ++ +++ L+ G GM+GGQMLD+Q E ID + MI K KTGAL+ FA Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A+A KE L + +LG++FQ+ DDLLDC D K Sbjct: 186 VMSAADIANADDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229 >gi|229543903|ref|ZP_04432962.1| Polyprenyl synthetase [Bacillus coagulans 36D1] gi|229325042|gb|EEN90718.1| Polyprenyl synthetase [Bacillus coagulans 36D1] Length = 289 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 79/226 (34%), Positives = 126/226 (55%), Gaps = 10/226 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K I+ L + + L A+ Y+L GGK+IR L+ S Sbjct: 9 KEIEKHLAQYIADL------RAPAVLKDAMHYSLQAGGKRIRPLLLLSTVSALGKPAGRG 62 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 ++ A+E +H YSLIHDDLP+MD+ +RRGKPT H + E AI+AG+GLLT++F +I+ Sbjct: 63 MQTACAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEAVAILAGDGLLTHSFRLIA 122 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 L D ++ +L+ L + G +GM+ GQ+ D++ E + ++ I KTG L+ Sbjct: 123 E-DPGLDDALKVKLIALLAKSAGPEGMVAGQVADMEGENKTLTLEELQYIHAHKTGKLLR 181 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 F+ +GA++ AS + E+ F ++LG+ FQ+ DD+LD E + K Sbjct: 182 FSVLAGAMIGGASTEQLEKFGQFADHLGLAFQIRDDILDIEGEQEK 227 >gi|312862780|ref|ZP_07723020.1| geranyltranstransferase [Streptococcus vestibularis F0396] gi|322516632|ref|ZP_08069546.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124] gi|311101640|gb|EFQ59843.1| geranyltranstransferase [Streptococcus vestibularis F0396] gi|322124902|gb|EFX96326.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124] Length = 290 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 80/228 (35%), Positives = 127/228 (55%), Gaps = 10/228 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-H 69 ++ID + D + + + L++AI Y++ GGK+IR + + F + Sbjct: 3 KREKIDAAIRDYYQKKNLPVSSD----LITAILYSVDSGGKRIRPLIFLDLLEGFGLELT 58 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + V A++E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L F Sbjct: 59 PSHFDVAASLEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDPFA 118 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGA 187 +++ T+L IR QL+ +L++ G GM+GGQMLD++ E + D +Q+ I + KTG Sbjct: 119 LVAQ--TELSAEIRVQLIQALSYASGTFGMVGGQMLDMKGEDLELDLSQLAKIHENKTGK 176 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ F + I++ E L+ G +G+ FQ+ DD+LD D Sbjct: 177 LLTFPFVAAGIVSQQEDRVMENLKEAGRLIGLAFQVRDDILDVTADFE 224 >gi|294827621|ref|NP_710507.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans serovar Lai str. 56601] gi|293385465|gb|AAN47525.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans serovar Lai str. 56601] Length = 313 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 85/247 (34%), Positives = 128/247 (51%), Gaps = 18/247 (7%) Query: 1 MNGGLPSK-LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58 MN SK + L+ QT S + Q L A++Y+L GGK++R L Sbjct: 1 MNSSSFSKIFHSYKSTFENFLNS---QTLSILSKQSAPELFEAMKYSLVAGGKRLRPVLA 57 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 L +GA++ECIH YSLIHDDLPSMDN RRG PT+H ++ E TAI+ Sbjct: 58 LAAFGGLQNETQNVLLLGASLECIHTYSLIHDDLPSMDNDDFRRGLPTLHKKFSESTAIL 117 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEFIDETQ- 176 AG+ L ++AF IS + + D+ + +L + H G GM+ GQ+ D+Q E + + Sbjct: 118 AGDALNSFAFYFISWIRVENGDHFLHRNLLEILHAGCGAPGMVSGQVYDLQMERENVKEN 177 Query: 177 -----------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + + ++KTGAL+ A G + + + L +GE+LG++FQ+ D Sbjct: 178 DSTNQSDKIEMLQLTHRLKTGALIKSALLLGNRLRKDWKKRETSLSQYGEDLGLLFQITD 237 Query: 226 DLLDCEE 232 D+LD E Sbjct: 238 DILDVEG 244 >gi|253570683|ref|ZP_04848091.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251839632|gb|EES67715.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 324 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + + T+ + L I Y L LGGK+IR L+ +L+ + + Sbjct: 6 QLLDKINNHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE H ++L+HDDL MD +RRGKPTVH +++ TAI++G+ +L AF ++ Sbjct: 66 TGIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAP 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ LD++ E + E + + ++KT L+ + Sbjct: 124 EHLKEVIDLFSLT------ALEICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A AS + E L FG +G+ FQL DDLLD D K+ Sbjct: 178 KIGAILAGASAVDAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKR 224 >gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum DSM 4136] Length = 295 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 9/239 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M+ L S L + +D LD + + + A+R++L GGK++R L Sbjct: 1 MSADLKSYLTQRVAFVDAALDRFVAAAETR-----PVTIHKAMRHSLFAGGKRLRPILCL 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + AL A+EC+H YSLIHDDLP MD+ +RRG PT H + E A++A Sbjct: 56 AAAEACGGSLENALYAACAVECLHTYSLIHDDLPCMDDDDMRRGVPTCHKVFGEAMALLA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ L +FE+++ + + + ++L L G ++GGQ+ D++ E + + Sbjct: 116 GDALQALSFELVAQTPVTHRHSP-AAMVLELARTAGSLHLVGGQVADLEGEGKKLGIEDL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KT AL+ + + G + A A ++ + L FG G+ FQ+ DD+LD + K Sbjct: 175 RYIHESKTAALLTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDVTQTTEK 233 >gi|257885167|ref|ZP_05664820.1| polyprenyl synthetase [Enterococcus faecium 1,231,501] gi|257821019|gb|EEV48153.1| polyprenyl synthetase [Enterococcus faecium 1,231,501] Length = 296 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 122/218 (55%), Gaps = 7/218 (3%) Query: 20 LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVG 76 L + + S + DR L A+ Y++ GGK+IR L+ + F+ +V Sbjct: 11 LPAVEKEILSFLDEHTTDRGLYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVA 70 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS Sbjct: 71 AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMA-- 128 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 L ++ + L+ L G QGM+ GQ DI+ E + ++ I + KTG L+ +A Sbjct: 129 HLGNSPKLLLLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALL 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +G I+A + L+ E+LG+ FQ+ DDLLD Sbjct: 189 AGGILAKQPEEIILLLQRLAEHLGLAFQIRDDLLDVIG 226 >gi|328952416|ref|YP_004369750.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109] gi|328452740|gb|AEB08569.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109] Length = 296 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 93/237 (39%), Positives = 135/237 (56%), Gaps = 10/237 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L + L E ID L+ L Q R++ A+RY+LL GGK++R L A Sbjct: 2 DLKTYLSERKTLIDQALECYLPPGNGPGQ-----RVVEAMRYSLLAGGKRLRPILCLAAA 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 N + V A+E IH YSLIHDDLP+MD+ RRG+PT H ++DE TAI+AG+G Sbjct: 57 EAVAGNVEQVMPVAGALEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKKFDEATAILAGDG 116 Query: 123 LLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 LLT AFE++++ T + ++ +++ ++ G QGM+GGQM D+ E QV Sbjct: 117 LLTAAFEVLAAAATNHPAQASVYHEVVQTIARAAGYQGMVGGQMADLLAEGQPSTLEQVE 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I ++KTGAL+ + SGA++ S + L +GE G+IFQ+ DDLLD E + Sbjct: 177 AIHRLKTGALLTASVRSGALLGGGSARDILALTHYGEKFGLIFQITDDLLDVEGESA 233 >gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501] gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501] Length = 295 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 128/237 (54%), Gaps = 9/237 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 + L ++ ++ LDD L + + +L ++RY+ L+GGK++R L A Sbjct: 2 EINDFLVAKAEAVNKALDDYLP-----AEDKKPAKLHQSMRYSTLMGGKRLRPVLTLIVA 56 Query: 63 -SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 SLF V + AA+E +H YSLIHDDLP MD+ RRG+ H + + A+++G+ Sbjct: 57 NSLFGVEEERIMPAAAAVELVHNYSLIHDDLPCMDDDDYRRGELANHKVFGDAIAVLSGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAFE+++ + ++ + G +GM+GGQ D+ E +++ + Sbjct: 117 ALLTYAFELLTKLEGDFTAEQILKVSKEVAQGAGFRGMVGGQAADMLAEGKAVEDIDLEF 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTGAL+ A +GAI+ A + E L + EN+G+ FQ+ DD+LD D K Sbjct: 177 IHRYKTGALLQAAVRTGAILGGADKEELAALTIYAENIGLSFQIIDDILDIVGDEEK 233 >gi|74316881|ref|YP_314621.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC 25259] gi|74056376|gb|AAZ96816.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC 25259] Length = 343 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 15/234 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L S L ++ + +D ++ + L ++ + S GGK++R LV A Sbjct: 25 ESLQSFLADDMRAVDHVIRERLYSDVVLIRQVSEYIINS-------GGKRLRPALVLLSA 77 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ Sbjct: 78 GCFGYRGQAHHELAAVVEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDF 135 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L + AF+++ DN+ +LS N +G + Q+L+ D IDE + + Sbjct: 136 LYSRAFQMMVG-----VDNMEVMRILSDATNTIAEGEVL-QLLNCHDPDIDEENYLRVIR 189 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT L A GA++ S+ +K+ L +G +LG FQL DD+LD D K Sbjct: 190 YKTAKLFEAAGRLGAVIGGGSEADKDALARYGMHLGTAFQLIDDVLDYSGDFLK 243 >gi|269214464|ref|ZP_06158593.1| geranyltranstransferase [Neisseria lactamica ATCC 23970] gi|269209749|gb|EEZ76204.1| geranyltranstransferase [Neisseria lactamica ATCC 23970] Length = 292 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 129/235 (54%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + Q + + +L+ L + + L A+RYA+L GGK++R LV + Sbjct: 1 MKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAVLDGGKRLRPMLVLAASE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G+ L Sbjct: 56 LGESVADAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDAL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 T AF+++S P T+L + ++ L G +GM GGQ +D+ + + + + + Sbjct: 116 QTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGRQMPQADLEQMH 174 Query: 182 KMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +KTGAL+ A G++ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 175 SLKTGALIRAAVVLGSMSCPNLSEDSLAILDDYAAKLGLAFQVIDDVLDCEADTA 229 >gi|223038350|ref|ZP_03608644.1| geranyltranstransferase [Campylobacter rectus RM3267] gi|222880207|gb|EEF15294.1| geranyltranstransferase [Campylobacter rectus RM3267] Length = 659 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 119/222 (53%), Gaps = 8/222 (3%) Query: 17 DTILDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH-LTA 72 D +L + +H+ + A+ Y L GGK R+ LV + A Sbjct: 378 DALLAEFKAFLGAHLPSNPSFHPCFDEALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAA 437 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 V A E +H YSLIHDDLP+MD+ +RRG+P++H+++DEVTAI+AG+ L T+AF I+ Sbjct: 438 FHVALAFETMHSYSLIHDDLPAMDDSDLRRGQPSLHVKFDEVTAILAGDALNTHAFYQIA 497 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 L + R + + L+ N G+ GM GQ +D E + ++ + KT L+ Sbjct: 498 RA--PLDADARIKCVEILSRNAGIYGMALGQAVDCYFENQKLGLEELKFLHIHKTARLIA 555 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + ++G ++A + E R+ G +LG+ FQ+ADD++D + Sbjct: 556 ASLQAGCVVAGLDETEAARIYDIGLDLGLAFQIADDIIDATQ 597 >gi|253566127|ref|ZP_04843581.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251945231|gb|EES85669.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 324 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 12/220 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L I+Y L +GGK+IR L+ +L+ + + Sbjct: 6 QLLDKINSHISDIQFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H Y+L+HDDL MD +RRGK TVH +++ TAI++G+ +L A++ +++ + Sbjct: 66 TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSS 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ +D+ E + E + + ++KT L+ + Sbjct: 124 EHLKEVMDLFSLT------ALEICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GAI+ AS + E L FG +G+ FQL DDLLD D Sbjct: 178 KIGAILGGASPEDAENLYDFGMQIGVAFQLQDDLLDVYGD 217 >gi|160938274|ref|ZP_02085629.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC BAA-613] gi|158438647|gb|EDP16404.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC BAA-613] Length = 305 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 67/238 (28%), Positives = 123/238 (51%), Gaps = 13/238 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 +L + I+ ++ L + +T H + A+ Y++ GGK++R L+ E Sbjct: 7 ETFKQELDARTAEIEQLIGTYLPE-----ETGHQKTIFEAMNYSMKAGGKRLRPMLMQEM 61 Query: 62 ASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 LF + AA+E IH SL+HDDLP MD+ +RRGK + +Y E ++ G Sbjct: 62 CRLFTGTLLEAVIPFMAAVEMIHTSSLVHDDLPCMDDDMMRRGKASTWAEYGEDIGVLTG 121 Query: 121 NGLLTYAFEIISSP-KTQLKDNIRSQLMLSL---THNIGLQGMLGGQMLDIQDEF--IDE 174 + L+ YAFE ++ +T + + S++ ++ G+ GM+GGQ +D++ I Sbjct: 122 DALMMYAFETAANAFETSIDPDELSRIGRAMGILARKTGVYGMIGGQTVDVELAGGPIPG 181 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ I ++KTGAL+ + GA++ A++ + + + +G+ FQ+ DD+LD Sbjct: 182 DKLEFIYRLKTGALIEASMLIGAVLGGAAEEDCKIVESLAAKIGMAFQIQDDILDVTG 239 >gi|325203376|gb|ADY98829.1| geranyltranstransferase [Neisseria meningitidis M01-240355] Length = 298 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 81/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E A++ G Sbjct: 59 ASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178 + L T AF++++ P + L + + ++ L G +GM GGQ +D+ + + + Sbjct: 119 DALQTQAFDVLARP-SGLPASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|325131595|gb|EGC54302.1| geranyltranstransferase [Neisseria meningitidis M6190] Length = 298 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E A++ G Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178 + L T AF+++S P T+L + ++ L G +GM GGQ +D+ + + + Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|325269799|ref|ZP_08136409.1| polyprenyl synthetase [Prevotella multiformis DSM 16608] gi|324987772|gb|EGC19745.1| polyprenyl synthetase [Prevotella multiformis DSM 16608] Length = 324 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 17/229 (7%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D ILD + + + L IRY L LGGK+IR L+ +LF + T L Sbjct: 5 DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E H Y+L+HDDL MD+ +RRG+ TVH+++D TAI++G+ +L AFE + Sbjct: 65 ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCD 122 Query: 136 T-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191 L+D +R + + GQ D++ E + E + + ++KT L+ Sbjct: 123 DRHLRDVLRL-------FTVTALEIGEGQQYDMEFEHRNDVTEAEYIEMIRLKTSVLLAC 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 A + GAI+A A + + L FGE +G+ FQL DD LD D KK Sbjct: 176 AMKIGAILADAPSEDMDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 224 >gi|303228797|ref|ZP_07315611.1| putative geranyltranstransferase [Veillonella atypica ACS-134-V-Col7a] gi|302516509|gb|EFL58437.1| putative geranyltranstransferase [Veillonella atypica ACS-134-V-Col7a] Length = 292 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 84/238 (35%), Positives = 123/238 (51%), Gaps = 12/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L+ + + I+ L +L + RL ++ Y+LL GGK+IR L Sbjct: 2 LKTYLETSKQSIEHWLSAVL-----NSPIPEYKRLYESMNYSLLQGGKRIRPILTKAVLD 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 V+ A+ECIH YSLIHDDLP+MDN RRG T H Y + AI+AG+GL Sbjct: 57 AMKVDASLYKEFLCALECIHTYSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 LTYAF++ S T + + + L G +GM+GGQ D+ E I ++ ++ Sbjct: 117 LTYAFQLCSE-NTTASAEQKIKAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KTGAL A E G I+++A Q + + LG++FQ+ DD+LD +L K Sbjct: 176 SGKTGALFNAAIELGLILSNADQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGK 233 >gi|303326969|ref|ZP_07357411.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3] gi|302862957|gb|EFL85889.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3] Length = 297 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 124/235 (52%), Gaps = 12/235 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 + + L+ + ++T L L RL ++ Y+L GGK++R L CA+ Sbjct: 7 MKALLKSRGREVETYLSACLD------GRPMPPRLKESMLYSLQAGGKRLRPVLCLSCAA 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + AL AAIE IH YSLIHDDLP+MD+ +RRGKP+ H +DE TAI+AG+GL Sbjct: 61 LCGLEPQKALPFAAAIEMIHTYSLIHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDGL 120 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---I 180 LT AF I+ + + + + + L G GM+GGQ D+ + + + Sbjct: 121 LTDAFVIM--CRAPVPPDRLLRAVAELALAAGASGMVGGQEWDMIYTGRSQVSLEELRGM 178 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 MKTGAL+ +C G ++A + FG +LG+ FQ+ADD+LD D Sbjct: 179 HAMKTGALLRASCVCGGLLAGVDDKALRAISNFGSSLGVAFQIADDILDVVADTA 233 >gi|283781730|ref|YP_003372485.1| polyprenyl synthetase [Pirellula staleyi DSM 6068] gi|283440183|gb|ADB18625.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068] Length = 296 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 130/237 (54%), Gaps = 9/237 (3%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 + +E SK + + +DD L+ T + L AIR++LL K++R LV Sbjct: 5 ADFRELSKTLRSEVDDALVAT-TEYGPDVPTHLAEAIRHSLLAPAKRLRPLLVLIACEAC 63 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + A+ A+E IH YSLIHDDLP+MD+ +RRG+P+ H ++ E T I+AG+ LL Sbjct: 64 GYDRSKAMPAAVAVELIHTYSLIHDDLPAMDDDDMRRGRPSCHAKFGESTGILAGDALLA 123 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKM 183 AFE++++ L + ++ + L G ++GGQ D+ EF D + I + Sbjct: 124 QAFEVLAAD--HLPGPVVAKCVKELAVAAGAANLVGGQHDDLGAEFADLGLASLEAIHRR 181 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 KTGA++C + GAI+A AS L +GE LG+ FQ+ DDLLD E D + K+ Sbjct: 182 KTGAMICVSLRLGAIIAGASSEVLTALSQYGERLGLAFQIVDDLLDLEGDQQLMGKR 238 >gi|305665579|ref|YP_003861866.1| putative isoprenoid biosynthesis related protein [Maribacter sp. HTCC2170] gi|88710335|gb|EAR02567.1| putative isoprenoid biosynthesis related protein [Maribacter sp. HTCC2170] Length = 334 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 13/225 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 ID + + + +T+ L + Y L LGGK++R L +F +H+ A+ Sbjct: 14 IDFYRTEFISYLEKNAKTREPLNLYKPMSYILGLGGKRLRPVLTLMTTEVFGKDHINAMD 73 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 AIE H +SL+HDD+ MD+ +RRGKPTVH ++D T I++G+ +L A+++ + Sbjct: 74 AALAIEIFHNFSLVHDDI--MDDAPLRRGKPTVHEKWDLNTGILSGDAMLIRAYQLFENY 131 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCF 191 ++ L+ + + GQ DI E ++ + + + KT L+ Sbjct: 132 ESDTFRE------LAQLFSKTALEVCEGQQYDIDFETREDVTVPEYLKMIEYKTAVLVAA 185 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + G I+A+AS +++ + FG+NLG+ FQL DD LD D PK Sbjct: 186 AMKMGGIIANASSTDQDCIYDFGKNLGLAFQLQDDYLDAFGD-PK 229 >gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455] gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455] Length = 297 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 112/234 (47%), Gaps = 9/234 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 +L S + L + + RL A+ Y+LL GGK++R L A Sbjct: 2 DFKEELSCRSAFFERSLRTFCEEERRRIPA----RLREAMNYSLLAGGKRLRPILCMAGA 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + L + A E H SLIHDDLP MDN +RRGKPT H+ Y E A++AG+ Sbjct: 58 EIMGEKAESVLPMATAFEMAHTASLIHDDLPCMDNDSLRRGKPTNHVVYGESLALLAGDA 117 Query: 123 LLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178 L AFE + K + + + +G +G+ GGQ D + + V Sbjct: 118 LFLDAFETALAGLLKNGAEPQRCVRALALFAQALGPEGICGGQVLDTDRASQTDERDFVV 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + MKT L+ + +GAI+A A RL +GEN+G+ FQ+ADDLLDC Sbjct: 178 DVASMKTMVLIRASLCAGAILAGADGEALRRLMKYGENVGLAFQIADDLLDCTG 231 >gi|163797801|ref|ZP_02191747.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] gi|159176923|gb|EDP61489.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] Length = 295 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 89/235 (37%), Positives = 134/235 (57%), Gaps = 8/235 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 L + L E ++ ++ ++D LL Q RL SA+R+ A GGK++R FLV + A Sbjct: 3 DLQAALAECAEDVERMMDLLLPQPEGA-----EARLYSAMRHSAFAGGKRLRPFLVMQSA 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F V+ A RV AA+E +H YSLIHDDLP+MD+ +RRG+ + H ++DE TAI+AG+ Sbjct: 58 RQFGVDRRCAARVAAAVEFMHTYSLIHDDLPAMDDADMRRGRTSCHKEFDEATAILAGDA 117 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMI 180 L AFE + P+T +R++L+ L G +GM GGQM+D+ E + + + Sbjct: 118 LQALAFETLVMPETHSDPAVRAELVRDLARASGGRGMCGGQMMDLLAESTEMDIGAITRL 177 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q++KTG + F+ SGAI+ L + + G+ FQ+ DDLLD D Sbjct: 178 QRLKTGEMFAFSAVSGAILGKGPYRAYMALHNYAQEFGLAFQIVDDLLDATGDSE 232 >gi|150398316|ref|YP_001328783.1| polyprenyl synthetase [Sinorhizobium medicae WSM419] gi|150029831|gb|ABR61948.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419] Length = 304 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 117/236 (49%), Positives = 165/236 (69%), Gaps = 3/236 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 P +L+ N+ ++ +L+ LL + LL A+R+A+L GGK++R FLV+E Sbjct: 6 SSFPERLKSNAVAVEALLETLLDPAVRGGEISRPANLLEAMRHAVLNGGKRLRPFLVSET 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+L + ALR+GAA+ECIHCYSL+HDDLP+MDN +RRGKPTVH+ +DE TAI+AG+ Sbjct: 66 AALLGGDVQAALRIGAALECIHCYSLVHDDLPAMDNDDMRRGKPTVHVAFDEATAILAGD 125 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179 LLT++F+II++P+T L D ++ L+L+L G GM GGQ LD+ E DET + + Sbjct: 126 SLLTFSFDIIAAPETALSDRQKTALVLALARAAGHGGMAGGQALDLAAEKSAPDETGIVL 185 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GAI+A A+ +++RLR FGE +G+ FQLADDLLD D Sbjct: 186 LQSMKTGALLRFACEAGAIIADAAAEDRQRLRAFGEKIGLAFQLADDLLDLTADAA 241 >gi|89073140|ref|ZP_01159679.1| putative geranyltranstransferase [Photobacterium sp. SKA34] gi|89051093|gb|EAR56550.1| putative geranyltranstransferase [Photobacterium sp. SKA34] Length = 300 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 80/209 (38%), Positives = 113/209 (54%), Gaps = 5/209 (2%) Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 Q + LL A++Y LLGGK+ R FL + + AA+ECIH YSLIHD Sbjct: 29 QPFADKALLKAMQYGTLLGGKRARPFLTYVTGEMLGLTQDDLDTPAAAVECIHAYSLIHD 88 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLS 149 DLP+MD+ RRG+PT HI +DE AI+AG+ L T AF+I++S + N R ++ Sbjct: 89 DLPAMDDDAFRRGQPTCHIAFDEAMAILAGDALQTLAFDILASGQLSQDGNTQRIAMVSE 148 Query: 150 LTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NE 206 L G GM GQ LD + + + Q+ +I + KTGAL+ A GA+ A Sbjct: 149 LAKASGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAAGDKGVAI 208 Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLP 235 +L + E +G+ FQ+ DD+LD D Sbjct: 209 LPQLDKYSEAIGLAFQVQDDILDVISDTE 237 >gi|320528396|ref|ZP_08029558.1| putative geranyltranstransferase [Solobacterium moorei F0204] gi|320131310|gb|EFW23878.1| putative geranyltranstransferase [Solobacterium moorei F0204] Length = 278 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 8/213 (3%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +LLL+ +++++ + SA+ Y+L GGK+IR L+ ++V+ A+E Sbjct: 4 ELLLE--NYIKSLPDSTTKSAMLYSLTAGGKRIRPQLLYTVLKGYSVDPEIGNPFACALE 61 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRG PT H Q++E TAI+AG+GLLTYAFEI + + Sbjct: 62 MIHTYSLIHDDLPAMDNDDLRRGLPTCHKQFNEATAILAGDGLLTYAFEI--AAGSNENS 119 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI 198 + + L+ G GM+ GQ LD++ E+ ID + I + KTG L+ Sbjct: 120 GTVLKCISILSKMAGPSGMVYGQQLDLEAEYKEIDWDMLQRIHEHKTGCLLTAPLLIACT 179 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 +A + + + G +LG+ FQ+ DD+LD E Sbjct: 180 LAKH-EEDISAWKKIGFSLGLAFQIQDDILDIE 211 >gi|150004490|ref|YP_001299234.1| putative isoprenoid biosynthesis related protein [Bacteroides vulgatus ATCC 8482] gi|149932914|gb|ABR39612.1| putative isoprenoid biosynthesis related protein [Bacteroides vulgatus ATCC 8482] Length = 325 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 12/223 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D +L+ + A+ + L + I Y L LGGK+IR L+ L+ N L Sbjct: 6 DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A IE H Y+L+HDDL MD +RR KPTVH +DE TAI++G+ +L A+ ++++ Sbjct: 66 AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNC- 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192 + ++ + L + GQ D++ E ++ + + ++KT L+ A Sbjct: 123 ----PERYLRQVMDIFSQTAL-EICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAA 177 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GA++ AS+++ +L FG +G+ FQL DD LD D Sbjct: 178 LKIGAVLGGASEDDARKLYDFGIKMGLAFQLQDDYLDVYGDSK 220 >gi|265766878|ref|ZP_06094707.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263253255|gb|EEZ24731.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 324 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 12/220 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L I+Y L +GGK+IR L+ +L+ + + Sbjct: 6 QLLDKINSHISDIQFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H Y+L+HDDL MD +RRGK TVH +++ TAI++G+ +L A++ +++ + Sbjct: 66 TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSS 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ +D+ E + E + + ++KT L+ + Sbjct: 124 EHLKEVMDLFSLT------ALEICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GAI+ AS + E L FG +G+ FQL DDLLD D Sbjct: 178 KIGAILGGASPEDAENLYDFGMQIGVAFQLQDDLLDVYGD 217 >gi|73668941|ref|YP_304956.1| dimethylallyltranstransferase / geranyltranstransferase [Methanosarcina barkeri str. Fusaro] gi|72396103|gb|AAZ70376.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Methanosarcina barkeri str. Fusaro] Length = 321 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 17/229 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L ++++ S +D +D+LL H + L A RY + GGK++R ++ A Sbjct: 3 LVDEIKKRSVHVDAAIDELL-------PVAHPEELYKASRYLVDAGGKRLRPAVLILAAE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + L A+E +H ++LIHDD+ MD IRRG P VH + + AI+AG+ L Sbjct: 56 ATGSDLKSVLPAAVAVELVHNFTLIHDDI--MDKDDIRRGMPAVHTIWGDAGAILAGDTL 113 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 + AFEI+S + + ++ ++S T + GQ LD+ E + + + + Sbjct: 114 YSKAFEILSKVQNEPARILKCMDVISKT----CTEICEGQWLDMDFEKREKVSKAEYIEM 169 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + KT L A + GA++ AS L +G +GI FQ+ DD+LD Sbjct: 170 VEKKTSVLYAAAAKIGALLGGASDEIAAALSEYGRFIGIGFQMYDDVLD 218 >gi|153870661|ref|ZP_02000013.1| Polyprenyl synthetase [Beggiatoa sp. PS] gi|152072868|gb|EDN69982.1| Polyprenyl synthetase [Beggiatoa sp. PS] Length = 296 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 82/234 (35%), Positives = 131/234 (55%), Gaps = 10/234 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L + +R+++ LD L M T L A+RY++ GGK++R LV Sbjct: 2 SLELLMTTYRQRVESALDTWLP-----MTTIQPIHLHEAMRYSVFNGGKRVRPLLVYLTG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + NVN ++ +A+E IH YSL+HDDLP+MD+ +RRGKPT H +DE TAI+AG+ Sbjct: 57 AALNVNPISLDAPASAVELIHAYSLVHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDA 116 Query: 123 LLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179 L T AF ++S Q D R +++ +L G +GM GGQ +D++ ++ Sbjct: 117 LQTLAFYVLSHDNNLQNSDKRRLEMIETLALASGSRGMAGGQAIDMESVGRSLNVAELEN 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ + + GA+ + + N+ E+L + + +G+ FQ+ DD+LD E Sbjct: 177 MHIHKTGALIRASVKMGALACNVIEVNQLEKLDHYAKCIGLAFQIQDDILDVES 230 >gi|53715029|ref|YP_101021.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46] gi|52217894|dbj|BAD50487.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46] gi|301164456|emb|CBW24014.1| putative isoprenoid biosynthesis related protein [Bacteroides fragilis 638R] Length = 324 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 12/220 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L I+Y L +GGK+IR L+ +L+ + + Sbjct: 6 QLLDKINSHISDIRFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H Y+L+HDDL MD +RRGK TVH +++ TAI++G+ +L A++ +++ + Sbjct: 66 TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSS 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ +D+ E + E + + ++KT L+ + Sbjct: 124 EHLKEVMDLFSLT------ALEICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GAI+ AS + E L FG +G+ FQL DDLLD D Sbjct: 178 KIGAILGGASPEDAENLYDFGMQIGVAFQLQDDLLDVYGD 217 >gi|86359590|ref|YP_471482.1| geranyltranstransferase protein [Rhizobium etli CFN 42] gi|86283692|gb|ABC92755.1| geranyltranstransferase protein [Rhizobium etli CFN 42] Length = 331 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 117/236 (49%), Positives = 169/236 (71%), Gaps = 3/236 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++L+ N+++I+ +L LL A + + L SA+ YA+L GGK++R FLV E Sbjct: 33 DTFETRLKNNARKIEALLVALLSPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVAES 92 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+L + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVH+++DE TAI+AG+ Sbjct: 93 AALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATAILAGD 152 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179 LLTYAF+I+++P+T L D+ ++ L+L+L GL GM GGQ LD+ E DET + Sbjct: 153 SLLTYAFDIVAAPETALPDSSKASLVLALARAAGLGGMAGGQALDLAAEKKAPDETGIIR 212 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD D Sbjct: 213 LQAMKTGALIRFACEAGAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDAA 268 >gi|60682991|ref|YP_213135.1| putative isoprenoid biosynthesis-like protein [Bacteroides fragilis NCTC 9343] gi|60494425|emb|CAH09221.1| putative isoprenoid biosynthesis related protein [Bacteroides fragilis NCTC 9343] Length = 324 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 12/220 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L I+Y L +GGK+IR L+ +L+ + + Sbjct: 6 QLLDKINSHISDIRFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H Y+L+HDDL MD +RRGK TVH +++ TAI++G+ +L A++ +++ + Sbjct: 66 TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSS 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ +D+ E + E + + ++KT L+ + Sbjct: 124 EHLKEVMDLFSLT------ALEICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GAI+ AS + E L FG +G+ FQL DDLLD D Sbjct: 178 KIGAILGGASPEDAENLYDFGMQIGVAFQLQDDLLDVYGD 217 >gi|319953302|ref|YP_004164569.1| geranyltranstransferase [Cellulophaga algicola DSM 14237] gi|319421962|gb|ADV49071.1| Geranyltranstransferase [Cellulophaga algicola DSM 14237] Length = 324 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 13/227 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 +RI+ ++ + + + L I Y L LGGK++R L A +F ++ A Sbjct: 2 QRIEDYREEFIAYLEEKSKLKEPINLYEPITYILSLGGKRLRPILTLMTADIFGADYKKA 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L A+E H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +L A+++ Sbjct: 62 LDAALAVEVFHNFSLVHDDI--MDDAPLRRGKATVHEKWDINTGILSGDAMLITAYQLFE 119 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALM 189 + + ++ + L+ + + GQ D+ E D+ + + + KT L+ Sbjct: 120 NYEGEVFRS------LAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLV 173 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + GAI+A+AS ++ + FG NLGI FQL DD LD D PK Sbjct: 174 GAAMKMGAIIANASTEGQDSIYEFGRNLGIAFQLQDDYLDAFGD-PK 219 >gi|268608471|ref|ZP_06142198.1| Polyprenyl synthetase [Ruminococcus flavefaciens FD-1] Length = 297 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 124/242 (51%), Gaps = 12/242 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 K E ++ L A +T+ L+ A+ Y+L GGK+IR LV Sbjct: 2 SDFKEKFSEYISLVEENLRKY---NAHSPETEAQKDLIEAMNYSLEAGGKRIRPVLVYAF 58 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + A AAIE IH +SLIHDDLP+MD+ RRG+ + H + E AI+AG+ Sbjct: 59 CNALGGDTGNAAAPAAAIEMIHTFSLIHDDLPAMDDDDYRRGRLSCHKAHGEAMAILAGD 118 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178 L F +I+ + L + +++ L +G GM+GGQ++D+Q+E +DE + Sbjct: 119 ALSVLPFGLIADDEK-LSPEQKIRIISELARAVGKNGMIGGQVIDMQNEQRNDVDEANLR 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDC---EEDL 234 + + KTG L+ +C G I A + + E + +G LG+ FQ+ DD+LD E+L Sbjct: 178 NMYRHKTGELISVSCIMGCICAGCTDSTIIEAAKEYGYKLGLAFQIIDDILDVTSTTEEL 237 Query: 235 PK 236 K Sbjct: 238 GK 239 >gi|45656187|ref|YP_000273.1| farnesyl-diphosphate synthase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599421|gb|AAS68910.1| geranyltranstransferase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 332 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 81/224 (36%), Positives = 122/224 (54%), Gaps = 14/224 (6%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L QT S + Q L A++Y+L GGK++R L L +GA++EC Sbjct: 40 LNSQTLSILSKQSAPELFEAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGASLEC 99 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSLIHDDLPSMDN RRG PT+H ++ E TAI+AG+ L ++AF IS + + D+ Sbjct: 100 IHTYSLIHDDLPSMDNDDFRRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVENGDH 159 Query: 142 IRSQLMLSLTHN-IGLQGMLGGQMLDIQDEFIDETQ------------VFMIQKMKTGAL 188 + +L + H G GM+ GQ+ D+Q E + + + + ++KTGAL Sbjct: 160 FLHRNLLEILHAGCGAPGMVSGQVYDLQMERENVKENDLTNQSDKIEMLQLTHRLKTGAL 219 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + A G + + + L +GE+LG++FQ+ DD+LD E Sbjct: 220 IKSALLLGNRLRKDWKKRETSLSQYGEDLGLLFQITDDILDVEG 263 >gi|302874811|ref|YP_003843444.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] gi|307690572|ref|ZP_07633018.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] gi|302577668|gb|ADL51680.1| Polyprenyl synthetase [Clostridium cellulovorans 743B] Length = 290 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 83/229 (36%), Positives = 125/229 (54%), Gaps = 8/229 (3%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69 + ID L++ + + +T + ++ Y+L +GGK+IR L SLF Sbjct: 5 KYKDSIDKWLENYFISKDGYEKT-----IYDSMSYSLNIGGKRIRPLLFLYTYSLFKDEI 59 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 L + AIE IH YSLIHDDLP+MD+ +RRG PT HI+Y + AI+AG+GLL A Sbjct: 60 DDVLDIAGAIEMIHTYSLIHDDLPAMDDDDLRRGMPTNHIKYGDAIAILAGDGLLNEAMN 119 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187 I+ + + + + ++ + G GM+ GQ++DI+ E I ++ + KTGA Sbjct: 120 IMFQYCIESESQLAVKACSYISKSAGAAGMIAGQIVDIESEGKKISIEKLKYMHSKKTGA 179 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ A S AI+A A E E+L +G LG+ FQ+ DD+LD D K Sbjct: 180 LINAAIVSAAILAGADSTEIEKLSEYGTKLGLAFQIKDDVLDVIGDESK 228 >gi|114769861|ref|ZP_01447471.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium HTCC2255] gi|114549566|gb|EAU52448.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium HTCC2255] Length = 291 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 89/235 (37%), Positives = 141/235 (60%), Gaps = 16/235 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 +L + + ++ L ++L Q Q ND + + IR+A+L GGK++R+FLV Sbjct: 3 NFNVQLNDTASIVEIALKEML-------QKQGNDLMSAPIRHAVLNGGKRLRAFLVIHSC 55 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F V TA++ AIEC+H YSL+HDDLP MD+ +RRGKPTVH+++DE TA + G+ Sbjct: 56 NIFEVQKDTAIQAAIAIECLHAYSLVHDDLPCMDDDELRRGKPTVHVKWDEATATLTGDA 115 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVF 178 L AFE+I+S I +L+ L G+QGM+ GQ DIQ E ++ + Sbjct: 116 LQALAFELIASLPNTDAIRI-VELLKKLAKASGMQGMVLGQAQDIQAEKSEVNLNINDIT 174 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +Q+ KTGAL+ ++ SGAI+++ +L + +++G+ FQ+ DD+LD E D Sbjct: 175 SLQQNKTGALIEWSAISGAILSNHDD---RKLLDYAKSIGLAFQIQDDILDIEGD 226 >gi|316985189|gb|EFV64141.1| putative geranyltranstransferase [Neisseria meningitidis H44/76] gi|325135064|gb|EGC57692.1| geranyltranstransferase [Neisseria meningitidis M13399] gi|325141097|gb|EGC63600.1| geranyltranstransferase [Neisseria meningitidis CU385] gi|325199464|gb|ADY94919.1| geranyltranstransferase [Neisseria meningitidis H44/76] Length = 298 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 85/238 (35%), Positives = 125/238 (52%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKTWQQRAQAQTELLLERFLPS-----EGEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178 + L T AF+++S P T+L + ++ L G +GM GGQ +D+ + + + Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA S E L + LG+ FQ+ DD+LDCE D Sbjct: 178 QMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTA 235 >gi|260220841|emb|CBA28811.1| Probable geranyltranstransferase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 341 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 82/243 (33%), Positives = 130/243 (53%), Gaps = 8/243 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALL-GGKKIRSFLV 58 ++ L + ++E R++ L+ + A + L+ A+RYA+L GGK++R LV Sbjct: 35 VDFELDTWMRERLDRVERALEAWITADAPQGVDHGAPAALVDAMRYAVLDGGKRLRPLLV 94 Query: 59 TEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 A L + ALR A+E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E Sbjct: 95 LAAHEAVAELGHGCDAAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEA 154 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172 +A++AG+ L AFE ++ + ++++L L G GM GGQ +D+ + Sbjct: 155 SALLAGDALQALAFEFLTPLDGSVPCTVQARLCGLLARAAGSSGMAGGQAIDLASVGLPL 214 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 E Q+ + ++KTGAL+ + GA A + L +G +G+ FQ+ DD+LD Sbjct: 215 TENQLREMHQLKTGALLQGSVVMGAQCAQPTAQVLSGLEAYGAAIGLAFQVVDDILDVTA 274 Query: 233 DLP 235 D Sbjct: 275 DSA 277 >gi|149184810|ref|ZP_01863128.1| Polyprenyl synthetase [Erythrobacter sp. SD-21] gi|148832130|gb|EDL50563.1| Polyprenyl synthetase [Erythrobacter sp. SD-21] Length = 296 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 95/239 (39%), Positives = 137/239 (57%), Gaps = 8/239 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M L + + +D D L + RL+ A+RYA + GGK++R LV Sbjct: 1 MPDLLSDAFDQVQQDVDAAFDAYLP-----VPQDTRGRLVEAMRYAAIGGGKRVRPLLVC 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A LF V+ A+ G A+E IH YSLIHDDLP MD+ +R GKPT+H YDE TA++A Sbjct: 56 ATAKLFGVDRDAAVAAGCAVEAIHAYSLIHDDLPCMDDDDLRHGKPTLHKVYDEATAVLA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177 G+ L AF+I++ P +R++L+ +L G +GM GGQM+DI +E D QV Sbjct: 116 GDCLHALAFDILTMPGISNDPFVRAELVATLAKASGHEGMAGGQMMDIVSDEEEYDIRQV 175 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +Q++KTGAL+ + E GA++ + LR + ++G+ FQ+ADDLLD E D K Sbjct: 176 TRLQQLKTGALLAASVEMGAVLGKLPPEGRTHLRAYARDIGLAFQIADDLLDVEGDETK 234 >gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp. lyrata] gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp. lyrata] Length = 310 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 14/230 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVT 59 N L + I+ LD+ + +H + A+RY++L G K+ + Sbjct: 33 NFDLRTYWTTLITEINQKLDEAI-------PVKHPAGIYEAMRYSVLAQGAKRASPVMCV 85 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF + L A A+E +H SLIHDDLP MD+ +RRGKP+ H Y A++A Sbjct: 86 AACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGIALLA 145 Query: 120 GNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 G+ L F I S P + +++ + +G GM GQ +D++ + Sbjct: 146 GDALFPLGFHHIVSHTPPELVPRATILRVIAEIARTVGSTGMAAGQYVDLEGGPFPPS-- 203 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +Q+ K GA+ + G ++ A+++E E LR +G +G+++Q DD+ Sbjct: 204 -FVQEKKFGAMGECSAVCGGLLGGATEDELESLRRYGRAVGMLYQAVDDI 252 >gi|91774308|ref|YP_567000.1| farnesyltranstransferase [Methanococcoides burtonii DSM 6242] gi|91713323|gb|ABE53250.1| Bifunctional short chain isoprenyl diphosphate synthase [Methanococcoides burtonii DSM 6242] Length = 322 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 17/230 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 L ++++ S +D + + L H + L A RY GGK++R ++ Sbjct: 2 DLMDEIKKRSVYVDKGIGEFL-------PISHPEELYRASRYLPDAGGKRLRPAVLMLST 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + ++ + A+E +H ++L+HDD+ MDN +RRG P VH+++ AI+AG+ Sbjct: 55 EAVGGDPMSVIPAAVALELVHNFTLVHDDI--MDNDDVRRGMPAVHVKWGSEGAILAGDT 112 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFM 179 L + AFEI+S + + ++ +LS T + GQ +DI+ E D E + Sbjct: 113 LYSKAFEILSVMEKDPERILKCVALLSRT----CTEICEGQWMDIEFENRDTVSEEEYLE 168 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + KT L A + GA++ AS + + FG +GI FQ+ DD++D Sbjct: 169 MVEKKTSVLYGAAAKVGALLGGASDEVADAMYEFGRLVGISFQIQDDVID 218 >gi|300726785|ref|ZP_07060215.1| polyprenyl synthetase [Prevotella bryantii B14] gi|299775898|gb|EFI72478.1| polyprenyl synthetase [Prevotella bryantii B14] Length = 324 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 75/224 (33%), Positives = 117/224 (52%), Gaps = 13/224 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 + ILD + + L IRY L +GGK+IR L+ +LF + + L Sbjct: 5 NEILDKVNDYLNKLPYDRKPVSLYEPIRYVLSIGGKRIRPTLMLLAYNLFKEDPESILMS 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E H Y+L+HDDL MD +RRGK TVH +++ TAI++G+ +L A++ + + K Sbjct: 65 ACALETYHNYTLLHDDL--MDQADLRRGKETVHKKWNANTAILSGDSMLVLAYQRMLNCK 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 + + + +L IG GQ D++ E + E + + ++KT L+ A Sbjct: 123 PEYQGKVL-KLFTETALEIG-----EGQQYDMEFETRMDVVEEEYIEMIRLKTSVLLACA 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + GAI+A AS + + L FGE +G+ FQL DD LD D PK Sbjct: 177 MKIGAILADASDEDADNLYKFGEQIGLAFQLQDDYLDVYGD-PK 219 >gi|15672839|ref|NP_267013.1| farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis Il1403] gi|12723785|gb|AAK04955.1|AE006320_4 farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis Il1403] gi|326406404|gb|ADZ63475.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus lactis subsp. lactis CV56] Length = 285 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 121/224 (54%), Gaps = 11/224 (4%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77 L+D L + + + L + +Y+LL GGK+IR L F++ A V A Sbjct: 8 LEDFLTEF--YESAEFPTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAA 65 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L F I+S+ Sbjct: 66 ALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFILSTA--D 123 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195 L I L L G GM+ GQ+LD+ E + ++ I ++KTG L+ F + Sbjct: 124 LSAEIIVALTRELAFASGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTFPFVA 183 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I+A S +E E+LR G+ LG+ FQ+ DD+LD +L K Sbjct: 184 AGIVAQKSTDEVEKLRQVGQILGLAFQIRDDILDVTATFAELGK 227 >gi|294778249|ref|ZP_06743675.1| polyprenyl synthetase [Bacteroides vulgatus PC510] gi|294447877|gb|EFG16451.1| polyprenyl synthetase [Bacteroides vulgatus PC510] Length = 325 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 12/223 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D +L+ + A+ + L + I Y L LGGK+IR L+ L+ N L Sbjct: 6 DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A IE H Y+L+HDDL MD +RR KPTVH +DE TAI++G+ +L A+ ++++ Sbjct: 66 AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNC- 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192 + ++ + L + GQ D++ E ++ + + ++KT L+ A Sbjct: 123 ----PERYLKQVMDIFSQTAL-EICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAA 177 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GA++ AS+++ +L FG +G+ FQL DD LD D Sbjct: 178 LKIGAVLGGASEDDARKLYDFGIKMGLAFQLQDDYLDVYGDSK 220 >gi|281491351|ref|YP_003353331.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus lactis subsp. lactis KF147] gi|281375092|gb|ADA64610.1| Dimethylallyltransferase/geranyltranstransferase [Lactococcus lactis subsp. lactis KF147] Length = 285 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 121/224 (54%), Gaps = 11/224 (4%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77 L+D L + + + L + +Y+LL GGK+IR L F++ A V A Sbjct: 8 LEDFLTEF--YESAEFPTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAA 65 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L F I+S+ Sbjct: 66 ALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFILSTA--D 123 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195 L I L L G GM+ GQ+LD+ E + ++ I ++KTG L+ F + Sbjct: 124 LSAEIIVALTRELAFASGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTFPFVA 183 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I+A S +E E+LR G+ LG+ FQ+ DD+LD +L K Sbjct: 184 AGIVAQKSTDEVEKLRQVGQILGLAFQIRDDILDVTATFAELGK 227 >gi|56416957|ref|YP_154031.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma marginale str. St. Maries] gi|222475323|ref|YP_002563740.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Florida] gi|56388189|gb|AAV86776.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma marginale str. St. Maries] gi|222419461|gb|ACM49484.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Florida] Length = 291 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 88/229 (38%), Positives = 126/229 (55%), Gaps = 4/229 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S +Q+ + +++ L Q + L A+ Y + GK IRSFL + A +F Sbjct: 11 SDIQQKVEDFASLVQKELAQVVHEKAECPSAALHEALGYVISNPGKCIRSFLASTSAQVF 70 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V+ LR+ AAIE +H YSL+HDDLPSMDN IRRGK + HI++ E A++ GN LLT Sbjct: 71 GVSTERTLRLSAAIEVVHAYSLVHDDLPSMDNSPIRRGKESCHIKFGEAVAVLTGNALLT 130 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMK 184 FE++S+ +R +++ L+ G GM+ GQMLD++ V I ++K Sbjct: 131 LTFELLSTMNEGCA--VRCEIIELLSKACGRCGMIAGQMLDMEAHSSTSFEGVRRIHELK 188 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T L ACE+GA++ AS E+ L +G LG FQ DDL D ED Sbjct: 189 TARLFSAACEAGAVLGGASAEERAALAKYGAALGCAFQAKDDLSDAWED 237 >gi|238765452|ref|ZP_04626373.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638] gi|238696346|gb|EEP89142.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638] Length = 299 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 133/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +L + +RI+ L D + N L+ A+RY A+LGGK++R +LV Sbjct: 2 DFNQQLAAHQQRINQALLDYIAPL-----PFGNSDLVEAMRYGAVLGGKRLRPYLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F ++ + AAIEC+H YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ Sbjct: 57 QMFGLSLTSLDAPAAAIECVHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P ++ D R ++ L + G+ GM GGQ LD++ E I ++ Sbjct: 117 LQTLAFSILAEAPMPEVADKDRLSMIAELAYASGVAGMCGGQALDLEAEARQITLDELER 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A L + +G+ FQ+ DD+LD D + Sbjct: 177 IHRHKTGALIRAAVRLGALAAGTPGREVLPLLDRYANAIGLAFQVQDDILDVIGDTATIG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|302024292|ref|ZP_07249503.1| geranyltranstransferase [Streptococcus suis 05HAS68] gi|330833278|ref|YP_004402103.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3] gi|329307501|gb|AEB81917.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3] Length = 289 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 80/228 (35%), Positives = 115/228 (50%), Gaps = 9/228 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-L 73 + + L L A Q Q +RL ++ Y+L GGK+IR L+ F + A Sbjct: 2 VASKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHY 61 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +V A +E IH SLIHDDLP+MDN RRG+ T H YDE TAI+AG+ L F ++ Sbjct: 62 QVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ 121 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 L L+ L+ G GM+ GQ+LD+ E + Q+ I KTG L+ F Sbjct: 122 --VDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTF 179 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 + ++A S LR G+ +G+ FQ+ DD+LD E++ K Sbjct: 180 PFVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTTTFEEIGK 227 >gi|94986851|ref|YP_594784.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis PHE/MN1-00] gi|94731100|emb|CAJ54462.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis PHE/MN1-00] Length = 300 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 133/237 (56%), Gaps = 13/237 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S L++ I+ L + + QH A+ Y+LL GGK++R+ L A+LF Sbjct: 10 SILKQRVTLIEDFLKTCIQENNISSTLQH------AMNYSLLAGGKRLRAVLCISSAALF 63 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 +++ + L A IE IH YSLIHDDLP+MD+ RRGKP+ H ++E AI+AG+ LLT Sbjct: 64 DLSPTSILPFAAGIEMIHTYSLIHDDLPAMDDDDFRRGKPSCHKAFNEALAILAGDALLT 123 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQK 182 AF +S+ + + N + + G GM+ GQ +DI+ + + + +I + Sbjct: 124 DAFTFMSTLNSIVPSNNILVAIHEIAQAAGSNGMVKGQSMDIEHTGVSDVSFNTLCIIHE 183 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 KTGAL +C +GA++A A+++ L+C+GE LG FQ+ DD+L+ D L K Sbjct: 184 YKTGALFRASCTTGAMLAGANESAIYALKCYGEALGAAFQITDDILNVTADSITLGK 240 >gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group] Length = 314 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 12/236 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 + L + ++ LD M +RL ++RY+ L GGK++R L Sbjct: 19 SFDFQRYLSARADAVNDALDR-------AMPRGFPERLCESMRYSVLAGGKRVRPVLALA 71 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + A V A+E IH SLIHDD+P MD+ +RRG+P+ H+ + E TA++AG Sbjct: 72 ACELVGGDAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAG 131 Query: 121 NGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQ 176 + L AFE ++ + + + + L G G+ GQ+ D + E + Sbjct: 132 DALHALAFEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAM 191 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I KT L+ A SGAI+ + E ER+R + +G++FQ+ DD+LD Sbjct: 192 LEYIHVHKTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTS 247 >gi|285019214|ref|YP_003376925.1| geranylgeranyl pyrophosphate synthase [Xanthomonas albilineans GPE PC73] gi|283474432|emb|CBA16933.1| putative geranylgeranyl pyrophosphate synthase protein [Xanthomonas albilineans] Length = 293 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 85/230 (36%), Positives = 120/230 (52%), Gaps = 9/230 (3%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASL 64 + +R++ LD L A Q RL +A+R+A L GGK++R LV +L Sbjct: 4 EAVFARWRQRVEAGLDAHLPAIA-----QAPQRLHAAMRHATLGGGKRMRPLLVYASGAL 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F + A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 59 FGTDPARLDAPALAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQ 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQK 182 + AFE+ + +R Q + +L G GM GGQ LDI I + + Sbjct: 119 SLAFEL-LAKADAADATLRVQWLQTLAEATGAAGMCGGQALDIDATGIVQPLADLQRMHA 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTGAL+ + GA+ A L F LG+ FQ+ DD+LD E Sbjct: 178 LKTGALIRASVRLGALGGGADHAALNHLDAFASALGLAFQIRDDILDVEA 227 >gi|99078713|ref|YP_611971.1| farnesyltranstransferase [Ruegeria sp. TM1040] gi|99035851|gb|ABF62709.1| Farnesyltranstransferase [Ruegeria sp. TM1040] Length = 336 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 9/218 (4%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78 L+ + L M +QH R+ + + GGK++R L A + L++ A Sbjct: 25 LEAVNLLIRERMASQHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYEGEHHLKLAAT 84 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L +F+++ + Sbjct: 85 VEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVDTGS-- 140 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 +R +L+ +G + QM D E + + KT AL A E G + Sbjct: 141 ---LRVLDILANASATIAEGEVL-QMTAATDLGTTEEIYLQVVRGKTAALFSAATEVGGV 196 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +A AS+ + + L +G+ LGI FQ+ADDLLD + D K Sbjct: 197 IAGASEAQVKALFDYGDALGIAFQIADDLLDYQGDTAK 234 >gi|110677933|ref|YP_680940.1| geranyltranstransferase [Roseobacter denitrificans OCh 114] gi|109454049|gb|ABG30254.1| geranyltranstransferase [Roseobacter denitrificans OCh 114] Length = 289 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 84/227 (37%), Positives = 131/227 (57%), Gaps = 7/227 (3%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 +R+D + + ++ A+ +A GGK++R FLV E A L ++ A+ Sbjct: 4 QRLDAAAAAVQAHFDKVLAAFEPLPIVEAMAHATSGGKRLRGFLVLETARLHDIAAGEAI 63 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 AIE +H YSL+HDDLP MDN +RRG+PTVH ++D+ TA++AG+ L T AFE+++ Sbjct: 64 WSATAIEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTH 123 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALM 189 P +R+ L LSL G QGM+ GQ LDI E + ++ +Q+ KTGAL+ Sbjct: 124 PGASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDEITRLQQGKTGALI 183 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++ ++GA +A A L+ + + LG+ FQ+ADD+LD D + Sbjct: 184 GWSAQAGARLAQAD---TAALKRYAQALGLAFQIADDILDVTGDSAQ 227 >gi|304382638|ref|ZP_07365132.1| geranyltranstransferase [Prevotella marshii DSM 16973] gi|304336263|gb|EFM02505.1| geranyltranstransferase [Prevotella marshii DSM 16973] Length = 324 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 73/221 (33%), Positives = 112/221 (50%), Gaps = 12/221 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D ILD + L I+Y L +GGK+IR L+ +L+ + + L Sbjct: 5 DAILDMFNRYLEGQNYDRSPKSLYEPIKYVLSMGGKRIRPTLMLLAYNLYKDDPESILST 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AIE H Y+L+HDDL MD+ +RRG+ TVH ++ TAI++G+ +L A+E ++ + Sbjct: 65 ACAIETYHNYTLLHDDL--MDHADVRRGRATVHKRWGANTAILSGDSMLVLAYERLARCR 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFA 192 + + +L L L + GQ D+ E D E + + ++KT L+ A Sbjct: 123 AD-----KLKDILDLFTETAL-EIGEGQEFDMSFEQRDDVKEEEYIEMIRLKTSVLLACA 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GAI+A A + E L FGE +G+ FQL DD LD D Sbjct: 177 MKMGAILADAPPADAENLYKFGEQIGLAFQLQDDFLDVYGD 217 >gi|115376388|ref|ZP_01463625.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1] gi|310822665|ref|YP_003955023.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1] gi|115366595|gb|EAU65593.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1] gi|309395737|gb|ADO73196.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1] Length = 297 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 88/243 (36%), Positives = 124/243 (51%), Gaps = 15/243 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L S L ++++L + S RL A+RY+LL GGK++R L Sbjct: 3 TFHLESFLATRQAHVESLLKSRADRLES---LGTPPRLAEAMRYSLLAGGKRLRPVLCLT 59 Query: 61 CASLFNVNHLTALR---VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 A + A A+E IH YSL+HDDLPSMDN +RRG+PT H Y E A+ Sbjct: 60 FADTTSRQSTAAAPVEDAACAVEYIHTYSLVHDDLPSMDNDDLRRGRPTNHKVYGEGMAL 119 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQ 176 +AG+ LLT AF ++ S + +R L L G GM+GGQ+LD+ +D Sbjct: 120 LAGDALLTEAFALVGSG----PEPVRGLLCGELARAAGAAGMVGGQVLDVAEDRPAHLDY 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + + +MKTGAL+ AC G + A R +G+ +G+ FQ+ADD+LD ED Sbjct: 176 LVRLHRMKTGALLRAACRMGVLGAGGDAETLARATTYGDAIGLAFQIADDILDVTATAED 235 Query: 234 LPK 236 L K Sbjct: 236 LGK 238 >gi|309800468|ref|ZP_07694624.1| geranyltranstransferase [Streptococcus infantis SK1302] gi|308115909|gb|EFO53429.1| geranyltranstransferase [Streptococcus infantis SK1302] Length = 291 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 15/234 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 QE +++ L+D + Q L +I Y++ GGK+IR +L+ E V Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESILYSVHAGGKRIRPYLLLEVLDSLQVP 57 Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +V AA+E IH SLIHDDLP+MDN RRG+ T H Y E AI+AG+ L Sbjct: 58 ITQEHAQVAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKVYGEALAILAGDALFLDP 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 + +I+ L + L+ +L+ G GM+ GQ+LD++ E ++ ++ I KT Sbjct: 118 YALIAQA--DLPSQTKVDLIANLSLASGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 G L+ F ++ I+A +N +++L+ GE +G+ FQ+ DD+LD E++ K Sbjct: 176 GKLLSFPFQAAGIIAGLDENHQKQLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229 >gi|291544838|emb|CBL17947.1| farnesyl-diphosphate synthase [Ruminococcus sp. 18P13] Length = 297 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 5/231 (2%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64 + L++ I+ I +L + +T ++L A+RY+L GGK+IR LV Sbjct: 3 ETNLRQMESDIEWIERELQHCCRTKPETNPQAKVLEAMRYSLEAGGKRIRPLLVLAFCRA 62 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + AL+ AIE IH YSLIHDDLP+MD+ RRG+ + H +DE TAI+AG+ L Sbjct: 63 CGGDVQKALKPALAIEMIHTYSLIHDDLPAMDDDDYRRGRLSCHKAFDEATAILAGDALN 122 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQ 181 FE++S+ T L R L+ L + G +GM+GGQ++DI +E +D+ + + Sbjct: 123 VLPFELLST-DTTLPAETRVSLIAELANAAGAEGMIGGQVIDIANETRTDVDQNNLVNMY 181 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTGAL+ AC G ++A A+ + + LG+ FQ+ DD+LD Sbjct: 182 AHKTGALIRVACTMGCMVAGANDKMLTAATEYAQRLGLAFQIVDDILDVTG 232 >gi|226311927|ref|YP_002771821.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599] gi|226094875|dbj|BAH43317.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599] Length = 300 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 124/237 (52%), Gaps = 12/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S L E + I+ L L Q + L +++Y+L+ GGK++R LV Sbjct: 5 HTFESYLVEKTAYIEQRLLPALEQQ------GVPENLYESMKYSLMAGGKRLRPMLVLAV 58 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + A+E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+ Sbjct: 59 LEALDKPIERGVAFAVALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGD 118 Query: 122 GLLTYAFEIISSP---KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176 LLT AF I+ +T + L+ L G GM+GGQM DI+ E ++ Q Sbjct: 119 ALLTRAFAYIAEAYMDRTDVSAATTVNLIAELGKRAGATGMVGGQMADIEGESKRLNLDQ 178 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + I + KTG L+ A G +A AS+ + E L +G +G+ FQ+ DD+L+ E D Sbjct: 179 LEFIHRHKTGDLLIAALRGGGYLAEASEGQMEALTRYGVCIGLAFQIQDDILNVEGD 235 >gi|87307782|ref|ZP_01089925.1| geranylgeranyl pyrophosphate synthetase (precursor) [Blastopirellula marina DSM 3645] gi|87289396|gb|EAQ81287.1| geranylgeranyl pyrophosphate synthetase (precursor) [Blastopirellula marina DSM 3645] Length = 298 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 88/243 (36%), Positives = 126/243 (51%), Gaps = 9/243 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M + L E S + +D L S DRL AIRY+LL GK++R L Sbjct: 1 MTSASLATLHEYSDTLRDEVDQAL-NVYSSFGEGCPDRLQEAIRYSLLAPGKRLRPLLTL 59 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A+ A+E IH YSLIHDDLP+MD+ +RRG+PT H +DE TAI+A Sbjct: 60 MAAETCGSDRTQAMPSACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHKAFDEATAILA 119 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV 177 G+ LL A EI++ + ++ L G ++GGQ D+ ++F D + Sbjct: 120 GDALLARALEIVADGYQD--PLVAARSCRELAKAAGATALVGGQADDLNEQFGSGDVEML 177 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234 I + KTGA++C + GAI A A + +L +GE +G+ FQ+ DDLLD D L Sbjct: 178 KAIHRRKTGAMICVSLRLGAIAAGADDQQVAQLNLYGEQIGLAFQIVDDLLDYAGDEAAL 237 Query: 235 PKK 237 K+ Sbjct: 238 GKR 240 >gi|69244725|ref|ZP_00602989.1| Polyprenyl synthetase [Enterococcus faecium DO] gi|257879355|ref|ZP_05659008.1| polyprenyl synthetase [Enterococcus faecium 1,230,933] gi|257881779|ref|ZP_05661432.1| polyprenyl synthetase [Enterococcus faecium 1,231,502] gi|257890181|ref|ZP_05669834.1| polyprenyl synthetase [Enterococcus faecium 1,231,410] gi|257893509|ref|ZP_05673162.1| polyprenyl synthetase [Enterococcus faecium 1,231,408] gi|258615761|ref|ZP_05713531.1| geranyltranstransferase [Enterococcus faecium DO] gi|260558797|ref|ZP_05830986.1| polyprenyl synthetase [Enterococcus faecium C68] gi|261206507|ref|ZP_05921207.1| polyprenyl synthetase [Enterococcus faecium TC 6] gi|289565417|ref|ZP_06445866.1| polyprenyl synthetase [Enterococcus faecium D344SRF] gi|293553173|ref|ZP_06673810.1| geranyltranstransferase [Enterococcus faecium E1039] gi|293560486|ref|ZP_06676978.1| geranyltranstransferase [Enterococcus faecium E1162] gi|293568312|ref|ZP_06679636.1| geranyltranstransferase [Enterococcus faecium E1071] gi|294614724|ref|ZP_06694626.1| geranyltranstransferase [Enterococcus faecium E1636] gi|294618979|ref|ZP_06698474.1| geranyltranstransferase [Enterococcus faecium E1679] gi|294621591|ref|ZP_06700756.1| geranyltranstransferase [Enterococcus faecium U0317] gi|314937883|ref|ZP_07845199.1| geranyltranstransferase [Enterococcus faecium TX0133a04] gi|314941374|ref|ZP_07848267.1| geranyltranstransferase [Enterococcus faecium TX0133C] gi|314950133|ref|ZP_07853419.1| geranyltranstransferase [Enterococcus faecium TX0082] gi|314951326|ref|ZP_07854380.1| geranyltranstransferase [Enterococcus faecium TX0133A] gi|314992843|ref|ZP_07858244.1| geranyltranstransferase [Enterococcus faecium TX0133B] gi|314998047|ref|ZP_07862935.1| geranyltranstransferase [Enterococcus faecium TX0133a01] gi|68196316|gb|EAN10745.1| Polyprenyl synthetase [Enterococcus faecium DO] gi|257813583|gb|EEV42341.1| polyprenyl synthetase [Enterococcus faecium 1,230,933] gi|257817437|gb|EEV44765.1| polyprenyl synthetase [Enterococcus faecium 1,231,502] gi|257826541|gb|EEV53167.1| polyprenyl synthetase [Enterococcus faecium 1,231,410] gi|257829888|gb|EEV56495.1| polyprenyl synthetase [Enterococcus faecium 1,231,408] gi|260075256|gb|EEW63569.1| polyprenyl synthetase [Enterococcus faecium C68] gi|260079217|gb|EEW66908.1| polyprenyl synthetase [Enterococcus faecium TC 6] gi|289162746|gb|EFD10597.1| polyprenyl synthetase [Enterococcus faecium D344SRF] gi|291589024|gb|EFF20848.1| geranyltranstransferase [Enterococcus faecium E1071] gi|291592462|gb|EFF24069.1| geranyltranstransferase [Enterococcus faecium E1636] gi|291594640|gb|EFF26022.1| geranyltranstransferase [Enterococcus faecium E1679] gi|291598756|gb|EFF29808.1| geranyltranstransferase [Enterococcus faecium U0317] gi|291602583|gb|EFF32798.1| geranyltranstransferase [Enterococcus faecium E1039] gi|291605634|gb|EFF35076.1| geranyltranstransferase [Enterococcus faecium E1162] gi|313587889|gb|EFR66734.1| geranyltranstransferase [Enterococcus faecium TX0133a01] gi|313592647|gb|EFR71492.1| geranyltranstransferase [Enterococcus faecium TX0133B] gi|313596543|gb|EFR75388.1| geranyltranstransferase [Enterococcus faecium TX0133A] gi|313599797|gb|EFR78640.1| geranyltranstransferase [Enterococcus faecium TX0133C] gi|313642741|gb|EFS07321.1| geranyltranstransferase [Enterococcus faecium TX0133a04] gi|313643574|gb|EFS08154.1| geranyltranstransferase [Enterococcus faecium TX0082] Length = 296 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 122/218 (55%), Gaps = 7/218 (3%) Query: 20 LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVG 76 L + + S + DR L A+ Y++ GGK+IR L+ + F+ +V Sbjct: 11 LPAVEKEILSFLDEHTTDRGLYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVA 70 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS Sbjct: 71 AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMA-- 128 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 L ++ + L+ L G QGM+ GQ DI+ E + ++ I + KTG L+ +A Sbjct: 129 HLGNSPKLLLLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALL 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +G I+A + L+ E+LG+ FQ+ DDLLD Sbjct: 189 AGGILAKQPEEILLLLQRLAEHLGLAFQIRDDLLDVIG 226 >gi|323144187|ref|ZP_08078822.1| geranyltranstransferase [Succinatimonas hippei YIT 12066] gi|322416028|gb|EFY06727.1| geranyltranstransferase [Succinatimonas hippei YIT 12066] Length = 294 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 79/231 (34%), Positives = 114/231 (49%), Gaps = 4/231 (1%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +L E + + ++ + L A+ Y L LGGK+ R LV Sbjct: 2 ELNEFALWVKNRVNSFMQARLDAFDADAP-ALKEAMSYGLILGGKRSRPLLVYATGKALG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + AA+ECIH YSLIHDD+P MDN +RRG PTVH ++ + TA++AG+ L T Sbjct: 61 ASDASLDYAAAAVECIHAYSLIHDDMPEMDNDELRRGHPTVHKKFGQATALLAGDALQTL 120 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMK 184 FE S + L +R +L L G GM GGQ LD + + I ++ ++ K Sbjct: 121 GFEFASDKNSGLSGELRGELCAVLAKGAGFSGMCGGQAMDLDAEGKHIPLERLRVLHSKK 180 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 TGAL+ A GA+ A A + K L + G+ FQ+ DD+LD D Sbjct: 181 TGALIRVAVAMGAVCADADEKTKAVLDEYAALTGLAFQVWDDVLDVIGDTA 231 >gi|154498045|ref|ZP_02036423.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC 29799] gi|150273035|gb|EDN00192.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC 29799] Length = 312 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 85/221 (38%), Positives = 126/221 (57%), Gaps = 5/221 (2%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76 +++D L + ++ + L A+ Y+LL GGK+IR L E + + TAL Sbjct: 31 ALVEDYLQHCFAGRDSRAD--LYDAMLYSLLAGGKRIRPVLALETCRMCGGDVTTALPFA 88 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E +H YSLIHDDLP MD+ +RRG+PT H Y E TA++AG+ LLT AFE I+ T Sbjct: 89 CAVEMVHTYSLIHDDLPCMDDDDLRRGQPTNHKVYGEATAVLAGDALLTAAFETIAEHGT 148 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 L L G +GM+GGQ LD+ E + +++ +Q++KTGAL+ A E Sbjct: 149 SLSPERALAASACLGRAAGARGMVGGQALDMAGEGHSLSLSELEELQRLKTGALISAATE 208 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 G I+A + E+ +R + + LG+ FQ+ DD+LD E D Sbjct: 209 IGCIVAGGGEKERAAVRRYAQLLGLAFQIRDDMLDVEGDEA 249 >gi|332882802|ref|ZP_08450413.1| heptaprenyl diphosphate synthase component 2 family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679304|gb|EGJ52290.1| heptaprenyl diphosphate synthase component 2 family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 322 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 14/228 (6%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 I+ ++ L + + + L I Y L LGGK++R L A LF ++ AL Sbjct: 4 INHYREEFLAHLKTSIAVKEPRNLYEPIDYILQLGGKRLRPVLTLIAADLFGGDYRKALP 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 AA+E H +SL+HDD+ MDN +RRGK TVH +++ AI++G+ +L A+ ++ S Sbjct: 64 AAAAVEVFHNFSLVHDDI--MDNASLRRGKATVHQKWNSNIAILSGDAMLISAYCLLDSY 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191 L+ + + GQ D+ E + Q + + KT L+ Sbjct: 122 PPDTFAA------LAKLFSKTALEVCEGQQWDMDFETQAQVSIPQYLQMIRYKTAVLVGA 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237 A + GAI+A AS + + FG +G+ FQL DD LD D KK Sbjct: 176 ALQMGAIIAGASIENQRLIYDFGVTIGLAFQLQDDYLDTFGDEAFGKK 223 >gi|322372793|ref|ZP_08047329.1| geranyltranstransferase [Streptococcus sp. C150] gi|321277835|gb|EFX54904.1| geranyltranstransferase [Streptococcus sp. C150] Length = 290 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 81/225 (36%), Positives = 127/225 (56%), Gaps = 10/225 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTA 72 +ID + D + + + L+SAI Y++ GGK+IR + + F + + Sbjct: 6 KIDAAIRDYYQKKNLPVSHE----LISAILYSVDGGGKRIRPLIFLDLLEGFGLELTDSH 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 V A++E IH SLIHDDLP+MDN RRG T H ++DE TAI+AG+ L F++++ Sbjct: 62 FDVAASLEMIHTGSLIHDDLPAMDNDDYRRGCLTNHKKFDEATAILAGDSLFLDPFDLLA 121 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 T+L IR +L+ +L+H G GM+GGQMLD++ E +D +Q+ I + KTG L+ Sbjct: 122 Q--TELSAEIRVELIQALSHASGTFGMVGGQMLDMKGEGQELDLSQLAQIHEHKTGKLLT 179 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 F + I+A + L+ G+ +G+ FQ+ DD+LD D Sbjct: 180 FPFVAAGIVAQQGLEVLDNLQEAGQLIGLAFQVRDDILDVTADFE 224 >gi|326335315|ref|ZP_08201510.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692586|gb|EGD34530.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 323 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 14/223 (6%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 ++ L H + L I Y L +GGK++R L A++F ++ AL A+ Sbjct: 9 NEFLAFMKEHFVEREPKSLYDPIHYILNVGGKRLRPTLTMLSANIFGEDYHKALYAALAV 68 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E H +SL+HDD+ MD +RRG+PTVH +++ T I++G+ +L A++ + + Sbjct: 69 EIFHNFSLVHDDI--MDEASLRRGQPTVHTKWNLNTGILSGDTMLILAYQYFEQYEPNIF 126 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESG 196 L+ + + GQ D+ E + Q + KT L+ A + G Sbjct: 127 QE------LAKIFSKTAIEVCEGQQYDVDFEKEVQVSTDQYLKMIAYKTAVLIGAALKMG 180 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237 AI+A ++ K+++ FG LGI +QL DD LD D KK Sbjct: 181 AIIAQTTEENKQQIYDFGLALGIAYQLQDDYLDTFGDVSFGKK 223 >gi|198283751|ref|YP_002220072.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665395|ref|YP_002426382.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248272|gb|ACH83865.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517608|gb|ACK78194.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 306 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 82/238 (34%), Positives = 118/238 (49%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 N + +RI+ +L+ LL RL A+RY+ L GGK++R LV Sbjct: 9 NETFAQFRSRSVRRIEDVLETLLPPAHL-----LPARLHDAMRYSTLGGGKRVRPLLVYA 63 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + V R AA+E IH YSL+HDDLP+MDN +RRG PT H YDE TAI+ G Sbjct: 64 AGACLGVPLELLDRPAAALEMIHAYSLVHDDLPAMDNDDLRRGLPTCHRAYDEATAILVG 123 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178 +GL AF +++ P + + Q++ SL G +GM+GGQ +D + + Sbjct: 124 DGLQAQAFLVLAEPGWGMAAERQVQMLASLAQAAGSRGMVGGQAIDLAAVGHELALPALE 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEEDL 234 + KTG LM A + A E L + + +G+ FQ+ DD+LD DL Sbjct: 184 QMHLHKTGMLMRCAIQLALCAAGIDAQEARGAALLRYADRVGLAFQVQDDILDEIGDL 241 >gi|332288106|ref|YP_004418958.1| putative geranyltranstransferase [Gallibacterium anatis UMN179] gi|330431002|gb|AEC16061.1| putative geranyltranstransferase [Gallibacterium anatis UMN179] Length = 295 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 86/210 (40%), Positives = 120/210 (57%), Gaps = 10/210 (4%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 L A+RY+LL GGK+IR FLV + V+ + AIECIHCYSLIHDDLP Sbjct: 29 SPAPLADAMRYSLLLGGKRIRPFLVYATGRMLGVDLAKLDHIAGAIECIHCYSLIHDDLP 88 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN +RR PT HI +DE TAI+AG+ L +YAFE+++ K+ + D + L + Sbjct: 89 AMDNDTLRRNNPTCHIAFDEATAILAGDALQSYAFELLA--KSPIADQQKILQFQLLANA 146 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKER 209 G +GM GQ LD+ E I ++ I K KTGAL+ A G + ++ K++ Sbjct: 147 SGAEGMCLGQSLDLISENKQIGLAELERIHKNKTGALITAAVLLGFYCSSYYQNEQIKQK 206 Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236 L F +G+ FQ+ DD+LD E+L K Sbjct: 207 LISFSAAIGLAFQVQDDILDITSSNEELGK 236 >gi|223932932|ref|ZP_03624927.1| Polyprenyl synthetase [Streptococcus suis 89/1591] gi|223898378|gb|EEF64744.1| Polyprenyl synthetase [Streptococcus suis 89/1591] Length = 289 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 80/228 (35%), Positives = 115/228 (50%), Gaps = 9/228 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-L 73 + + L L A Q Q +RL ++ Y+L GGK+IR L+ F + A Sbjct: 2 VASKLQRLEETMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHY 61 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +V A +E IH SLIHDDLP+MDN RRG+ T H YDE TAI+AG+ L F ++ Sbjct: 62 QVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ 121 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 L L+ L+ G GM+ GQ+LD+ E + Q+ I KTG L+ F Sbjct: 122 --VDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTF 179 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 + ++A S LR G+ +G+ FQ+ DD+LD E++ K Sbjct: 180 PFVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGK 227 >gi|296109469|ref|YP_003616418.1| Polyprenyl synthetase [Methanocaldococcus infernus ME] gi|295434283|gb|ADG13454.1| Polyprenyl synthetase [Methanocaldococcus infernus ME] Length = 317 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 78/230 (33%), Positives = 117/230 (50%), Gaps = 19/230 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 +E + ID L L + ++ L A ++ GGK+IR +L +L N Sbjct: 6 KEILEEIDKELKKYLDK---------DNNLYKAAKHLTFAGGKRIRPYLSILTYNLKKDN 56 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L ++E IH Y+LIHDD+ MDN +RRGKPTVHI Y E AI+AG+ L AF Sbjct: 57 INEILPAAVSVELIHNYTLIHDDI--MDNDELRRGKPTVHIAYGEEMAILAGDLLYAKAF 114 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTG 186 E I + K + K + +LS + GQ +D++ E + + K KTG Sbjct: 115 EAIGNIKDE-KKAYKVLKVLSKA----CVDVCEGQAMDMEFESYWPTLEEYLEMIKKKTG 169 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 AL+ + E G IMA ++ E + ++ + E +G+ FQ+ DD+LD D K Sbjct: 170 ALLEASAEIGGIMAEFNEEEMKAIKSYAEKIGLTFQIQDDILDIIGDEKK 219 >gi|297588519|ref|ZP_06947162.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516] gi|297573892|gb|EFH92613.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516] Length = 271 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 15/228 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 QE I+T L +L +D++ A+RY ++ K++R L +FN Sbjct: 6 QEIINLINTSLKEL---------KFSDDKIGEAMRYTIVDDSAKRLRPLLFLLTYQMFNE 56 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + +L AIE IH YSL+HDDL MDN RRGK TVH +Y E A++ G+ LL Y+ Sbjct: 57 SITESLNYALAIELIHNYSLVHDDLECMDNDEYRRGKLTVHKKYGEDIAVLVGDALLNYS 116 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 FE++S +K+ ++ + G GM+ GQ+LDI E I E + I KT Sbjct: 117 FEVLSES---IKNEFDAKCANYIVKKSGCFGMIKGQLLDIDSE-ISEKNIIEIYDKKTCN 172 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + S I++ N +L + NLG+ FQ+ DD++D E DL Sbjct: 173 LLKASTVSAGILSRVGDNTLLKLEDYAFNLGMAFQIIDDIMDYENDLK 220 >gi|311069029|ref|YP_003973952.1| geranyltranstransferase [Bacillus atrophaeus 1942] gi|310869546|gb|ADP33021.1| geranyltranstransferase [Bacillus atrophaeus 1942] Length = 296 Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 87/240 (36%), Positives = 135/240 (56%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L E I+ L + + D L ++ Y+L GGK++R +V Sbjct: 1 MANKFEQFLAERKNVIEQQL------SVYTERLNMPDSLKKSMLYSLEAGGKRLRPVVVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H + E TA++A Sbjct: 55 AILHAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLA 114 Query: 120 GNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176 G+GLLT +F++I+S ++ + + R +L+ L G +GM+GGQ+ D++ E + + Sbjct: 115 GDGLLTESFKLITSHVSEDVSADKRLRLVNELISAAGTEGMVGGQIADMEAESKSVSLEE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I + KT L+ F+ +GAI+A A +NE E LR F ++GI FQ+ DD+LD E + K Sbjct: 175 LESIHERKTAKLLAFSVMAGAILADAPENEIETLRAFSSHIGIGFQIRDDILDLEGNEEK 234 >gi|254995136|ref|ZP_05277326.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Mississippi] gi|255003306|ref|ZP_05278270.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Puerto Rico] gi|255004432|ref|ZP_05279233.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA) [Anaplasma marginale str. Virginia] Length = 286 Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 88/229 (38%), Positives = 126/229 (55%), Gaps = 4/229 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S +Q+ + +++ L Q + L A+ Y + GK IRSFL + A +F Sbjct: 6 SDIQQKVEDFASLVQKELAQVVHEKAECPSAALHEALGYVISNPGKCIRSFLASTSAQVF 65 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V+ LR+ AAIE +H YSL+HDDLPSMDN IRRGK + HI++ E A++ GN LLT Sbjct: 66 GVSTERTLRLSAAIEVVHAYSLVHDDLPSMDNSPIRRGKESCHIKFGEAVAVLTGNALLT 125 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMK 184 FE++S+ +R +++ L+ G GM+ GQMLD++ V I ++K Sbjct: 126 LTFELLSTMNEGCA--VRCEIIELLSKACGRCGMIAGQMLDMEAHSSTSFEGVRRIHELK 183 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T L ACE+GA++ AS E+ L +G LG FQ DDL D ED Sbjct: 184 TARLFSAACEAGAVLGGASAEERAALAKYGAALGCAFQAKDDLSDAWED 232 >gi|146319308|ref|YP_001199020.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] gi|146321511|ref|YP_001201222.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33] gi|253752341|ref|YP_003025482.1| geranyltranstransferase [Streptococcus suis SC84] gi|253754167|ref|YP_003027308.1| geranyltranstransferase [Streptococcus suis P1/7] gi|253756101|ref|YP_003029241.1| geranyltranstransferase [Streptococcus suis BM407] gi|145690114|gb|ABP90620.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33] gi|145692317|gb|ABP92822.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33] gi|251816630|emb|CAZ52270.1| putative geranyltranstransferase [Streptococcus suis SC84] gi|251818565|emb|CAZ56398.1| putative geranyltranstransferase [Streptococcus suis BM407] gi|251820413|emb|CAR47048.1| putative geranyltranstransferase [Streptococcus suis P1/7] gi|292558940|gb|ADE31941.1| Polyprenyl synthetase [Streptococcus suis GZ1] gi|319758742|gb|ADV70684.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14] Length = 289 Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 80/228 (35%), Positives = 115/228 (50%), Gaps = 9/228 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-L 73 + + L L A Q Q +RL ++ Y+L GGK+IR L+ F + A Sbjct: 2 VASKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHY 61 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +V A +E IH SLIHDDLP+MDN RRG+ T H YDE TAI+AG+ L F ++ Sbjct: 62 QVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ 121 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 L L+ L+ G GM+ GQ+LD+ E + Q+ I KTG L+ F Sbjct: 122 --VDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTF 179 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 + ++A S LR G+ +G+ FQ+ DD+LD E++ K Sbjct: 180 PFVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGK 227 >gi|121634131|ref|YP_974376.1| geranyltranstransferase [Neisseria meningitidis FAM18] gi|120865837|emb|CAM09569.1| geranyltranstransferase [Neisseria meningitidis FAM18] gi|325143100|gb|EGC65447.1| geranyltranstransferase [Neisseria meningitidis 961-5945] gi|325143170|gb|EGC65516.1| geranyltranstransferase [Neisseria meningitidis 961-5945] gi|325197545|gb|ADY93001.1| geranyltranstransferase [Neisseria meningitidis G2136] Length = 298 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 84/238 (35%), Positives = 124/238 (52%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E A++ G Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178 + L T AF+++S P T+L + ++ L G +GM GGQ +D+ + + + Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA S E L + LG+ FQ+ DD+LDCE D Sbjct: 178 QMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTA 235 >gi|146308855|ref|YP_001189320.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp] gi|145577056|gb|ABP86588.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp] Length = 295 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 79/236 (33%), Positives = 132/236 (55%), Gaps = 10/236 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + R+D L+ L + +Q RL A+RY+++ GGK++R LV Sbjct: 2 IKAYQASCQARVDAALEPLFQPPRAELQ-----RLYEAMRYSVMNGGKRVRPLLVYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + N A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE +AI+AG+GL Sbjct: 57 ALDGNLDRADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180 + AFE+++ + +D +R Q++ +L+ G GM+GGQ +D + +D+ + + Sbjct: 117 QSLAFEVLADRRRNPQDAEVRLQMIDALSSAAGPAGMVGGQAIDLGSVGQQLDQAALETM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ + GA+ + A + + L + +G+ FQ+ DD+LD E D Sbjct: 177 HRHKTGALIEASVLLGALASGNADELSLKALLQYARAVGLAFQVQDDILDVESDTA 232 >gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330] Length = 295 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 80/226 (35%), Positives = 127/226 (56%), Gaps = 7/226 (3%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTA 72 + ++ + +LQT + L A+RY+ L GGK++R LV + L N Sbjct: 10 QAVEQA--ERILQTVLPISQVAPQTLHEAMRYSTLDGGKRLRPLLVLAASELGNQVQAAC 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AA+ECIH YSL+HDD+P+MDN +RRGKPT H+Q+ E TA++ G+ L T AF+I+S Sbjct: 68 EAAMAAVECIHVYSLVHDDMPAMDNDSLRRGKPTCHVQFGEATALLVGDALQTLAFDILS 127 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190 + +T+L + +++ L G GM GGQ +D+ + + +T++ + +KTGAL+ Sbjct: 128 T-ETELSTVRQLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQTELEFMHSLKTGALIR 186 Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A G + + + L + LG+ FQ+ DD+LDCE D Sbjct: 187 AAVALGGLSCPDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEADTA 232 >gi|254882776|ref|ZP_05255486.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643916|ref|ZP_07998491.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A] gi|254835569|gb|EET15878.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317384440|gb|EFV65407.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A] Length = 325 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 68/223 (30%), Positives = 113/223 (50%), Gaps = 12/223 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D +L+ + A+ + L + I Y L LGGK+IR L+ L+ N L Sbjct: 6 DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A IE H Y+L+HDDL MD +RR KPTVH +DE TAI++G+ +L A+ ++++ Sbjct: 66 AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNC- 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192 + ++ + L + GQ D++ E ++ + + ++KT L+ A Sbjct: 123 ----PERYLKQVMDIFSQTAL-EICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAA 177 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GA++ S+++ +L FG +G+ FQL DD LD D Sbjct: 178 LKIGAVLGGGSEDDARKLYDFGIKMGLAFQLQDDYLDVYGDSK 220 >gi|260890388|ref|ZP_05901651.1| geranyltranstransferase [Leptotrichia hofstadii F0254] gi|260860008|gb|EEX74508.1| geranyltranstransferase [Leptotrichia hofstadii F0254] Length = 265 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 79/209 (37%), Positives = 122/209 (58%), Gaps = 11/209 (5%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDLP 93 + A+ YA++ GGK+IR L+ LF N + + AA+E IHCYSL+HDDLP Sbjct: 1 MAEAMEYAVMNGGKRIRPVLMYMICDLFEKNNYKSYDKIKEIAAALEFIHCYSLVHDDLP 60 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRGK TVH +Y+E ++ G+ LLT AF I+++ K+ L D + +L+ L+ Sbjct: 61 AMDNDDYRRGKLTVHKKYNEAIGVLVGDVLLTEAFGIVANSKS-LGDKNKIELISKLSEY 119 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQ +D++ E ++ + I KTG L+ A E I + ++E++ Sbjct: 120 AGFFGMVGGQFVDMESENKKVEIDTLKYIHAHKTGKLLTAAIELPMIALNIESEKREKMV 179 Query: 212 CFGENLGIIFQLADDLLDCEE---DLPKK 237 + + LGI FQ+ DD+LD E ++ KK Sbjct: 180 EYSKLLGIAFQIKDDILDIEGNFEEIGKK 208 >gi|257869058|ref|ZP_05648711.1| geranyltranstransferase [Enterococcus gallinarum EG2] gi|257803222|gb|EEV32044.1| geranyltranstransferase [Enterococcus gallinarum EG2] Length = 294 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 84/227 (37%), Positives = 123/227 (54%), Gaps = 12/227 (5%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67 ++ I+ ++ L + S + L ++ Y++ GGK+IR L+T AS Sbjct: 6 EKYLSEIEAVIVRFLEEHTS------DQTLKDSMLYSIHAGGKRIRPLLLTATVASFHKS 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 L + AA+E IH YSLIHDDLP+MD+ +RRGKPT H Y E AI+AG+GLLT A Sbjct: 60 MTLGVYQTAAALEMIHTYSLIHDDLPAMDDDALRRGKPTNHKVYGEALAILAGDGLLTAA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F+++S + I LS T G GM+ GQ DIQ E + ++ I + KT Sbjct: 120 FQLLSLADLEPDKKILLLQQLSHT--AGTAGMVAGQAADIQGENQQLTLDELISIHERKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G L+ FA +G I+A ++ + L F ++G+ FQ+ DDLLD Sbjct: 178 GELIRFAVIAGGILADQTEEVIQLLDQFARHMGLAFQIRDDLLDVTS 224 >gi|312891447|ref|ZP_07750964.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603] gi|311296141|gb|EFQ73293.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603] Length = 324 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 12/227 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 ++I + + + ++ L I Y + LGGK++R L+ +F + A Sbjct: 2 QQIQQLQNSINQYISNKKYGTTPVELYEPIYYIMALGGKRLRPCLLLMACDMFGGDVQQA 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L AIE H ++L+HDD+ MD +RRGKPTVH +++ AI++G+ ++ A ++I Sbjct: 62 LAPALAIEVFHNFTLMHDDI--MDKAPLRRGKPTVHEKWNANVAILSGDVMMVEANKLIM 119 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALM 189 D+ + +L + ++ + G+ GQ +D+ E + + + ++KT L+ Sbjct: 120 Q-----VDDRILRPVLDVFNDTAV-GVCEGQQIDMNFETLTHVTIDEYINMIRLKTAVLV 173 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + GA++ A E L FGE LGI FQL DD+LD D K Sbjct: 174 AGALKMGALVGGADDAEASLLYSFGEQLGIAFQLQDDILDVYGDPKK 220 >gi|258511741|ref|YP_003185175.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478467|gb|ACV58786.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 291 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 81/231 (35%), Positives = 119/231 (51%), Gaps = 9/231 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63 + + L+ + ++ L L T H RL A+ Y+L+ GK++R LV A Sbjct: 1 MQTYLEACKEAVNAFLARLFEPTGLHA------RLKEAMNYSLMADGKRLRPALVIATAE 54 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F V L AA+E IHCYSLIHDDLP MD+ +RRG+PT H+ + E A++AG+ L Sbjct: 55 TFGVPRDRVLPAAAAVELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDAL 114 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT AF +++ P + + ++ +L G+ GM+GGQ +DI+ V I Sbjct: 115 LTEAFHLLARPLEGVPAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVEFIH 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L+ E G A + L C+GE LG+ FQ+ DD+LD Sbjct: 175 LHKTARLIQACVEIGGYFADLDDQVRWALSCYGECLGLAFQMIDDVLDVTA 225 >gi|329123445|ref|ZP_08252009.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116] gi|327471027|gb|EGF16482.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116] Length = 296 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 94/238 (39%), Positives = 131/238 (55%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A+ YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMEYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G QGM GQ LD+ E I ++ + Sbjct: 117 ALQSFAFEILTK-TPNISSEQKLALIKILAQGAGAQGMCLGQSLDLISEHKQISLNELEL 175 Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + A + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|322412220|gb|EFY03128.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 290 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75 +D+ + + ++ L+ AI Y++ GGK+IR ++ E F V+ A + Sbjct: 5 ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLIILEMIEGFGVSLQNAHFDL 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F +I+ Sbjct: 65 AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193 +L ++ L+ L+ G GM+GGQMLD+ +++ + Q+ +I KTG L+ F Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPF 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++ A++ + +++L G +G FQ+ DD+LD EDL K Sbjct: 183 KAAALVTEQTITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228 >gi|257095634|ref|YP_003169275.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048158|gb|ACV37346.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 307 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 10/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 ++ +++ L L + RL A+RYA L GGK++R LV Sbjct: 15 SFADWMRGVQAQLEAALARNLPPGEAI-----PGRLHQAMRYASLDGGKRVRPLLVFAAG 69 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + +A+E IH YSL+HDDLP MD+ +RRG+PT H++YDE TA++ G+ Sbjct: 70 DLTDAARERLELAASAVELIHSYSLVHDDLPCMDDDVLRRGRPTCHVEYDEATALLVGDS 129 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180 L + AFE+++ + +++ L G GM GGQ +D++ + +++ ++ ++ Sbjct: 130 LQSLAFELLAREDFG-DGARQLEMVRLLARASGSCGMAGGQSIDLESVGKTLNQPELELM 188 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTGAL+ A GA+ S E+E L F + G++FQ+ DD+LDC Sbjct: 189 HALKTGALIRAAVILGALCGTPLSTTEREALDRFAKRAGLLFQVVDDILDCTA 241 >gi|260588126|ref|ZP_05854039.1| geranyltranstransferase [Blautia hansenii DSM 20583] gi|331082306|ref|ZP_08331432.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541653|gb|EEX22222.1| geranyltranstransferase [Blautia hansenii DSM 20583] gi|330400792|gb|EGG80393.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium 6_1_63FAA] Length = 296 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 81/246 (32%), Positives = 126/246 (51%), Gaps = 19/246 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN ++LQE + + +++ L + + R+ A+ Y++ GGK++R + Sbjct: 1 MN--FKTELQERTDFAEAVIEKYLPEEHG-----FSGRMAEAVNYSMRAGGKRLRPVFMR 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E + AA+E +H +SLIHDDLP++DN RRGK T HI + E AI+A Sbjct: 54 EAYQILGGEGEIIEPFMAALEMVHTHSLIHDDLPALDNDEFRRGKQTTHIVFGEAAAILA 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSL----THNIGLQGMLGGQMLDIQDEFIDET 175 G+ LL YA+E S KD Q + G++GMLGGQ +D++++ Sbjct: 114 GDALLNYAYETAFSAFDMAKDEAELQRVAKALKVLAQKTGIKGMLGGQGVDVENDGKPLE 173 Query: 176 Q--VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230 + + I + KT AL+ A G I+A A+ E+L G +GI FQ+ DD+LD Sbjct: 174 KQLLDYIYENKTSALIEAALMVGGILAGATD--IEKLEQIGSKIGIAFQIQDDILDVISS 231 Query: 231 EEDLPK 236 E+L K Sbjct: 232 AEELGK 237 >gi|170691118|ref|ZP_02882284.1| Polyprenyl synthetase [Burkholderia graminis C4D1M] gi|170144367|gb|EDT12529.1| Polyprenyl synthetase [Burkholderia graminis C4D1M] Length = 293 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 79/235 (33%), Positives = 119/235 (50%), Gaps = 11/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 + +R++ L+ L +T +L A+RYA+LGG K++R L Sbjct: 3 FEQWTRSVLERVEAALEHYLP-----AETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 + AF ++S L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVSLTSD--VLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRAQLETMH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ A R L + +G+ FQ+ DD+LD D Sbjct: 176 RMKTGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230 >gi|16273345|ref|NP_439590.1| geranyltranstransferase [Haemophilus influenzae Rd KW20] gi|1170589|sp|P45204|ISPA_HAEIN RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|1574277|gb|AAC23087.1| geranyltranstransferase (ispA) [Haemophilus influenzae Rd KW20] Length = 295 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISTEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|229823205|ref|ZP_04449274.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271] gi|229787371|gb|EEP23485.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271] Length = 297 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 83/227 (36%), Positives = 127/227 (55%), Gaps = 11/227 (4%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 +L + + LD QT H+ RL+ A+RY+L GGK++R ++ ++ + Sbjct: 5 ELDTLRQLFERSLDQ---QTRYHL---TPPRLIEAMRYSLKNGGKRLRPVMLLAVLAIQS 58 Query: 67 VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + + L+ A+E IH YSLIHDDLP+MDN +RRG+ T H ++ E AI+AG+ LLT Sbjct: 59 EDLVKCGLKTAIALEYIHTYSLIHDDLPAMDNDDLRRGQATNHKRFGEGLAILAGDALLT 118 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKM 183 AF+ + S L D + L+ L+ G GM+ GQ+ DI+ E + I Sbjct: 119 DAFQFLVSDDL-LDDRTKLALIDQLSQASGSWGMVAGQVGDIEAEQTPVDYQGLKQIHDQ 177 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTGAL FA E+GAI+ A + + LR FG + G+ +Q+ +DL+D Sbjct: 178 KTGALFRFALEAGAIIGGADASTCQALRQFGRHFGLAYQIHNDLMDV 224 >gi|209517792|ref|ZP_03266627.1| Polyprenyl synthetase [Burkholderia sp. H160] gi|209501738|gb|EEA01759.1| Polyprenyl synthetase [Burkholderia sp. H160] Length = 293 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 120/235 (51%), Gaps = 11/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 + +R++T L+ L +T L A+RYA+LGG K++R L Sbjct: 3 FEQWTRSVLERVETALEHYLP-----AETTEPAGLHGAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 + AF +++S + ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVVLTSDVLGVP--QQASLVRELALASGSIGMCGGQAIDLASVGHTLTRPQLETMH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ A + L + +G+ FQ+ DD+LD D Sbjct: 176 RMKTGALLRAAVRMGALAGEAPDAKALASLDAYAAAVGLAFQVVDDILDVTTDSA 230 >gi|152968946|ref|YP_001334055.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893358|ref|YP_002918092.1| geranyltranstransferase [Klebsiella pneumoniae NTUH-K2044] gi|262042444|ref|ZP_06015604.1| geranyltranstransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150953795|gb|ABR75825.1| geranyltranstransferase (farnesyldiphosphate synthase) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545674|dbj|BAH62025.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040219|gb|EEW41330.1| geranyltranstransferase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 299 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 94/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +LQ ++ + L + Q N L+ A+ Y ALLGGK++R FLV Sbjct: 2 DFPQQLQACVEQANEALRRFIAP-----QPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V T AA+ECIH YSL+HDDLP+MD+ +RRG PT HI++ E AI+AG+ Sbjct: 57 EMFGVCRTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I+S P + D R ++ L G+ GM GGQ LD+Q E +D + Sbjct: 117 LQTLAFSILSDAPMVDVPDRDRLAMVSELAQASGVAGMCGGQALDLQAEGQQVDLQALER 176 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + EN+G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRMGALSAGERGRAALPALDRYAENIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|296159644|ref|ZP_06842467.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1] gi|295890088|gb|EFG69883.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1] Length = 293 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 81/235 (34%), Positives = 122/235 (51%), Gaps = 11/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ +R++T L+ L A+ T L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLERVETALEHYLPGEATEPAT-----LHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 + AF ++S L ++ L+ L G GM GGQ +D+ + TQ+ + Sbjct: 118 QSQAFVALTS--EVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ + R L + +G+ FQ+ DD+LD D Sbjct: 176 RMKTGALLRAAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230 >gi|255531531|ref|YP_003091903.1| polyprenyl synthetase [Pedobacter heparinus DSM 2366] gi|255344515|gb|ACU03841.1| Polyprenyl synthetase [Pedobacter heparinus DSM 2366] Length = 322 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 123/235 (52%), Gaps = 22/235 (9%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64 P++LQE I+ + ++ ++L + IRY + +GGK+IR L A L Sbjct: 4 PAQLQEV---IENAIQNINY-------PAQPEKLYAPIRYIMSMGGKRIRPVLTLMAADL 53 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F + L A+ AIE H ++L+HDD+ MDN +RRGK TVH ++ AI++G+ ++ Sbjct: 54 FEADILKAIPAALAIETFHNFTLVHDDI--MDNAPLRRGKQTVHEKWGINNAILSGDVMM 111 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQ 181 A + +S + + + T N +G+ GQ LD++ E + + + Sbjct: 112 VEANKQLSMLHSAILKDAL------ETFNATARGVCEGQQLDMEFEQQAIVSIPEYINMI 165 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++KT L+ A + GA +A A NE E+L FG NLGI FQL DD+LD D K Sbjct: 166 RLKTAVLLGGAMKLGAQVAGADHNEAEQLYQFGLNLGIAFQLQDDILDVYGDPEK 220 >gi|154686692|ref|YP_001421853.1| YqiD [Bacillus amyloliquefaciens FZB42] gi|154352543|gb|ABS74622.1| YqiD [Bacillus amyloliquefaciens FZB42] Length = 296 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 135/240 (56%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L + L + I+ L + A + L ++ Y+L GGK++R +V Sbjct: 1 MTNKLDAFLASRKQLIEQQLSLYTERLA------MPETLKKSMLYSLEAGGKRLRPLVVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 AVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLA 114 Query: 120 GNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176 G+GLLT +F++I+S ++ + R +L+ L G +GM+GGQ D++ E I + Sbjct: 115 GDGLLTESFKLITSHVSEAVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKRITLEE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I + KT L+ F+ +GAI+A A ++E E+LR F ++GI FQ+ DD+LD E K Sbjct: 175 LESIHERKTAKLLGFSVTAGAILADAPEDEVEKLRLFSSHIGIGFQIRDDILDIEGHEEK 234 >gi|313148980|ref|ZP_07811173.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313137747|gb|EFR55107.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 324 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 12/222 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + T+ L ++Y L +GGK+IR L+ +L+ + + Sbjct: 6 QLLDKINSHISDIQFTRTPVGLYDPVKYVLSMGGKRIRPVLMLMAYNLYKEDVTSVYDPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H Y+L+HDDL MD +RRGK TVH +++ TAI++G+ ++ A++ ++S + Sbjct: 66 TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMMVLAYQYMASCSS 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ +D+ E D E + + ++KT L+ + Sbjct: 124 EYLKEVMDLFSLT------ALEICEGQQMDMGFESRDDVKEEEYLEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GAI+ AS+ + E L FG +G+ FQL DDLLD D Sbjct: 178 KIGAILGGASREDAENLYDFGMQIGVAFQLQDDLLDVYGDSA 219 >gi|238791414|ref|ZP_04635052.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909] gi|238729030|gb|EEQ20546.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909] Length = 306 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 13/244 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 + +L + +R++ L D + + L++A+RY A+LGGK++R +LV Sbjct: 7 SADFQQQLAAHQQRVNQALLDFIAPL-----PFGDSDLVAAMRYGAVLGGKRLRPYLVYA 61 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F ++ AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG Sbjct: 62 TGQMFGLSLTNLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAG 121 Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 + L T AF I++ + + R ++ L G+ GM GGQ LD++ E I T + Sbjct: 122 DALQTLAFSILAEANMPDVANKDRLSMIAELAKASGVAGMCGGQALDLEAEARQISLTNL 181 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED--- 233 I + KTGAL+ A GA+ A A L + E +G+ FQ+ DD+LD D Sbjct: 182 EQIHRYKTGALIRAAVRLGALAAGAPGRRALPLLDRYSEAIGLAFQVQDDILDVIGDTAT 241 Query: 234 LPKK 237 + K+ Sbjct: 242 IGKR 245 >gi|330006916|ref|ZP_08305788.1| polyprenyl synthetase [Klebsiella sp. MS 92-3] gi|328535670|gb|EGF62119.1| polyprenyl synthetase [Klebsiella sp. MS 92-3] Length = 299 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 94/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +LQ ++ + L + Q N L+ A+ Y ALLGGK++R FLV Sbjct: 2 DFPQQLQACVEQANEALRRFIAP-----QPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V T AA+ECIH YSL+HDDLP+MD+ +RRG PT HI++ E AI+AG+ Sbjct: 57 EMFGVCRTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I+S P + D R ++ L G+ GM GGQ LD+Q E +D + Sbjct: 117 LQTLAFSILSDAPMVDVPDRDRLAMVSELAQASGVAGMCGGQALDLQAEGQQVDLQALER 176 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + EN+G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGERGRAALPALDRYAENIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|240113852|ref|ZP_04728342.1| geranyltranstransferase [Neisseria gonorrhoeae MS11] gi|240126561|ref|ZP_04739447.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679] gi|254494609|ref|ZP_05107780.1| geranyltranstransferase [Neisseria gonorrhoeae 1291] gi|268599920|ref|ZP_06134087.1| geranyltranstransferase [Neisseria gonorrhoeae MS11] gi|268685141|ref|ZP_06152003.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679] gi|226513649|gb|EEH62994.1| geranyltranstransferase [Neisseria gonorrhoeae 1291] gi|268584051|gb|EEZ48727.1| geranyltranstransferase [Neisseria gonorrhoeae MS11] gi|268625425|gb|EEZ57825.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679] Length = 298 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 84/238 (35%), Positives = 122/238 (51%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----GNEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G Sbjct: 59 ASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178 + L T AF+++S P T+L + ++ L G GM GGQ +D+ + + + Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKTGGSAGMAGGQAIDLANVGKQMVQADLE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA S E L + LG+ FQ+ DD+LDCE D Sbjct: 178 RMHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTA 235 >gi|332201672|gb|EGJ15742.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA47368] Length = 291 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 120/227 (52%), Gaps = 12/227 (5%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57 Query: 69 HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A V A+E IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +I+ L I+ L+ +L+ G GM+ GQ+LD++ E + ++ I KT Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTA 222 >gi|15615344|ref|NP_243647.1| geranyltranstransferase [Bacillus halodurans C-125] gi|10175402|dbj|BAB06500.1| geranyltranstransferase [Bacillus halodurans C-125] Length = 294 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 91/236 (38%), Positives = 129/236 (54%), Gaps = 10/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M+ L L E I+ + + + S D L +++ Y+L GGK+IR L+ Sbjct: 1 MSVQLLQFLDEIKDIIEERMPAHIERLNS------PDMLKNSMLYSLKAGGKRIRPALLL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F + + + AIE IH YSLIHDDLPSMD+ IRRGKPT H + E AI+A Sbjct: 55 ATMKSFQKDISQGIDLACAIEMIHTYSLIHDDLPSMDDDDIRRGKPTNHKVFGEAHAILA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLTY+FEI++ K + L G +GM+GGQ+ DI+ E + + Sbjct: 115 GDALLTYSFEIVAKMKGVDPAKTLCL-IEELARAAGPEGMVGGQVADIEGENQKLTVEGL 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I KTGAL+ FA +GA +A AS+ + E +R F LG++FQ+ DD+LD E D Sbjct: 174 EYIHHHKTGALLSFAIVAGARLADASEQDIENIRRFSRELGLLFQIKDDILDVEGD 229 >gi|52425115|ref|YP_088252.1| IspA protein [Mannheimia succiniciproducens MBEL55E] gi|52307167|gb|AAU37667.1| IspA protein [Mannheimia succiniciproducens MBEL55E] Length = 300 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 90/236 (38%), Positives = 131/236 (55%), Gaps = 11/236 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 + LQ+ +RI+ L+ + + L A++Y LLGGK+IR FLV Sbjct: 8 FSNDLQQAQQRINRFLEAQFDEINTR-----PSPLADAMKYGLLLGGKRIRPFLVYATGR 62 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + AAIE IH YSLIHDDLP+MDN +RRG+PT HI +D TAI+AG+ L Sbjct: 63 MLGADTAQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDHATAILAGDAL 122 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 +AFEI++ T L + +L+ L+HN G+ GM GQ LD+ E I +++ I Sbjct: 123 QAFAFEILTKS-TALSAEQKLRLIQVLSHNSGVFGMCLGQSLDLISEHKQISLSELEQIH 181 Query: 182 KMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ A + G I + A + +L + +G+ FQ+ DD+LD E DL Sbjct: 182 RNKTGALLSAALKMGFICSSHFADNALEAKLDRYAAAIGLAFQVQDDILDIEGDLA 237 >gi|85705714|ref|ZP_01036811.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. 217] gi|85669704|gb|EAQ24568.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. 217] Length = 333 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 14/233 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L + L + ++ ++ + + + Q L+ A GGK++R LV A Sbjct: 12 EQLAAHLATKMEAVNVLIRERMASRHAPRIPQVTAHLVEA------GGKRLRPMLVLATA 65 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 66 DLCGYDGPFDVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDY 123 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L AF+++ P + +R +LS +G + Q+ QD E + + Sbjct: 124 LFARAFQLMVEPGS-----LRVLDILSNASATIAEGEVL-QLSAAQDLATTEDIYLQVVR 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL A E G ++A A ++ + L +G+ LGI FQ+ DDLLD + D+ Sbjct: 178 GKTAALFSAATEVGGVIAGAPEDHVKALFEYGDALGIAFQIVDDLLDYQGDVK 230 >gi|227113448|ref|ZP_03827104.1| geranyltranstransferase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 303 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 132/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +KL + +R + +L + + L++A+ Y +LLGGK++R FLV Sbjct: 3 DFSTKLNAHYQRTNRMLGHFIADL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVYTTG 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+ Sbjct: 58 ELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 117 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P Q+ D R ++ L H G+ GM GGQ D++ E +D + Sbjct: 118 LQTLAFSILADAPMPQVSDRDRLAMLSELAHASGVAGMCGGQAFDLEAEGHQVDLAALER 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + + L + +G+ FQ+ DD+LD D Sbjct: 178 IHRHKTGALIRAAVRLGALAAGETGRDALPHLDRYANAIGLAFQVQDDILDVVGDSATTG 237 Query: 236 KK 237 K+ Sbjct: 238 KR 239 >gi|300779369|ref|ZP_07089227.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC 35910] gi|300504879|gb|EFK36019.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC 35910] Length = 323 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 18/234 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69 E R I+ D + + + L + Y + GGK++R +V +F + Sbjct: 2 EFLDRYQQIVADAITK---YTFKDKPSELYEPMNYIISHGGKRLRPIMVLMACEMFGGDL 58 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A++ AIE H ++LIHDD+ MD +RR KPT+H + I++G+GL+ A++ Sbjct: 59 KEAIKPALAIEFFHNFTLIHDDI--MDEAPLRRNKPTIHTLHGLNVGILSGDGLMLKAYK 116 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTG 186 L+ I + TH L + GQ DI E + + KTG Sbjct: 117 FF----EDLEPEIFKACIRIFTHTGLL--LCEGQQYDINFETQKDVTFDDYIRMITYKTG 170 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 L + E GA++A A + + + FG+++GI FQ+ DD LD D KK Sbjct: 171 VLSASSFEIGALIAKADFKDAKAIFNFGKHIGIAFQIMDDYLDVFGDQAQFGKK 224 >gi|229828869|ref|ZP_04454938.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM 14600] gi|229792032|gb|EEP28146.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM 14600] Length = 305 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 138/240 (57%), Gaps = 11/240 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + +L+E + + I+ L + + +T ++ A+ YAL+ GK++R L+ E Sbjct: 8 DMDVRRELEERTLEAEGIIRRFLPREEGYQKT-----IMEAMSYALMSPGKRLRPILMRE 62 Query: 61 CASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 CA+ F+ AL AAIE IH YSL+HDDLP+MDN +RRGKPT H ++ E ++A Sbjct: 63 CAACFDQTSPQALPFFMAAIEMIHAYSLVHDDLPAMDNDLLRRGKPTTHARFGEAMGVLA 122 Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DET 175 G+ LL YAFE + S +T + + ++ L G+ GM+GGQ++D++ E I D+ Sbjct: 123 GDALLNYAFETALQSLETDGTNPAVHKSLILLARKAGIYGMIGGQVVDVESEHIQGMDKH 182 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++ I ++KTGAL+ A GA++ A +++ + +G+ FQ+ DD+LD D Sbjct: 183 RLDFIHELKTGALIEAAMCIGALLGGADESQLLTVEQAAAKIGLAFQIEDDILDITGDEK 242 >gi|260590834|ref|ZP_05856292.1| polyprenyl synthetase [Prevotella veroralis F0319] gi|260537185|gb|EEX19802.1| polyprenyl synthetase [Prevotella veroralis F0319] Length = 324 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 74/228 (32%), Positives = 121/228 (53%), Gaps = 19/228 (8%) Query: 21 DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D++L + ++ +R L I+Y L LGGK+IR L+ +LF + + L Sbjct: 5 DEILYKVNDYINNISYNRKPWSLYEPIKYVLSLGGKRIRPTLMLLSYNLFKEDPESILSP 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E H Y+L+HDDL MD+ +RRG+ TVH+++D TAI++G+ +L AF+ ++ Sbjct: 65 ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFDRMAKCS 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFA 192 + + +L L L + GQ D++ E + E + + ++KT L+ A Sbjct: 123 -----DKYLREVLKLFTTTAL-EIGEGQQYDMEFETRNDVKEEEYIEMIRLKTSVLLACA 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GA++A A + + E L FGE +G+ FQL DD LD D KK Sbjct: 177 MKIGALLADAPEEDAESLYKFGEQVGLAFQLQDDYLDVYGDPKVFGKK 224 >gi|170025469|ref|YP_001721974.1| geranyltranstransferase [Yersinia pseudotuberculosis YPIII] gi|169752003|gb|ACA69521.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII] Length = 306 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +L + +R++ L D + N L+ A+RY A++GGK++R +LV Sbjct: 9 DFKQQLAAHQQRVNQALLDFIAPL-----PFGNSNLIEAMRYGAVIGGKRLRPYLVYATG 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F ++ AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ Sbjct: 64 QMFGLSFANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILAGDA 123 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179 L T AF I++ P + D R +++ L G GM GQ LD++ E + Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGDLEQ 183 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A A + L + E +G+ FQ+ DD+LD D + Sbjct: 184 IHRHKTGALIRAAVRLGALAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTATIG 243 Query: 236 KK 237 K+ Sbjct: 244 KR 245 >gi|241894940|ref|ZP_04782236.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313] gi|241871658|gb|EER75409.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313] Length = 290 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 85/221 (38%), Positives = 130/221 (58%), Gaps = 10/221 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 +I+ L++ L ++AS + L A+RYA++ GGK++R L + + L Sbjct: 13 QIEHTLENELAKSASVAE------LQEAMRYAVMAGGKRLRPMLSLAVIQTYGLPVNEYL 66 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +V +AIE IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+ L AFE ++ Sbjct: 67 KVASAIELIHTYSLIHDDLPAMDDDELRRGKPTTHRAFGEDTAILAGDALQPLAFEWLTD 126 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGALMC 190 L D R QL++++ G GM+ GQ+LDI+ + I KTGAL+ Sbjct: 127 LDQPLNDAQRVQLVIAMAQAAGGAGMVAGQVLDIEAMKTSAVTLAETQAIHYHKTGALIA 186 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 +A ++GAIMA+A+++ + L FG G+ FQ+ DD+ D + Sbjct: 187 YALQAGAIMANANEDIQNILHDFGMAYGLAFQIKDDIDDYQ 227 >gi|238787986|ref|ZP_04631782.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641] gi|238723934|gb|EEQ15578.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641] Length = 306 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 132/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +L + +R++ + D + N L+ A+RY A+LGGK++R +LV Sbjct: 9 DFNQQLAAHQQRVNQAILDFIAPL-----PFGNSDLVKAMRYGAVLGGKRLRPYLVYATG 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F ++ AAIECIH YSL+HDDLP+MD+ +RRG+PT H+++ E AI+AG+ Sbjct: 64 QMFGLSLANLDAPAAAIECIHAYSLMHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123 Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ SP + D R ++ L + G+ GM GGQ LD++ E I + Sbjct: 124 LQTLAFSILAESPMPDVADKDRLSMIAELAYASGVAGMCGGQALDLEAEARQISLDDLEQ 183 Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A A L + +G+ FQ+ DD+LD D + Sbjct: 184 IHRHKTGALIRAAVRLGALAAGAPGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIG 243 Query: 236 KK 237 K+ Sbjct: 244 KR 245 >gi|261822523|ref|YP_003260629.1| geranyltranstransferase [Pectobacterium wasabiae WPP163] gi|261606536|gb|ACX89022.1| Polyprenyl synthetase [Pectobacterium wasabiae WPP163] Length = 303 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 ++L + +R + +L + + L++A+ Y +LLGGK++R FLV Sbjct: 3 DFNTQLNAHYQRTNRMLGHFIADL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVYTTG 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+ Sbjct: 58 ELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 117 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P Q+ D R ++ L H G+ GM GGQ D++ E +D + Sbjct: 118 LQTLAFSILADAPMPQVSDRDRLAMLSELAHASGVAGMCGGQSFDLEAEGHQVDLVALER 177 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA A A + L + +G+ FQ+ DD+LD D Sbjct: 178 IHRHKTGALIRAAVRLGAFAAGDAGRAALPHLDRYANAIGLAFQVQDDILDVVGDSATTG 237 Query: 236 KK 237 K+ Sbjct: 238 KR 239 >gi|260580726|ref|ZP_05848552.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae RdAW] gi|260092543|gb|EEW76480.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae RdAW] Length = 296 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISTEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|161506132|ref|YP_001573244.1| hypothetical protein SARI_04320 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867479|gb|ABX24102.1| hypothetical protein SARI_04320 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 498 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 15/241 (6%) Query: 3 GGLPSKLQENSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLV 58 G + N ++I+ + D+ A+ ++ ++D +L++ + Y ++ GGK+IR + Sbjct: 168 GAISPAFAMNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIA 227 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 A + + A IE IH +L+HDD+ +D +RRGK T + + +++ Sbjct: 228 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 285 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 G+ + T AF++++S + ++ ++S N+ +G + Q++++ D I E Sbjct: 286 VGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYM 339 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 + KT L A + I+A + +++ L+ +G LG FQL DDLLD D L Sbjct: 340 RVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGKHLG 399 Query: 236 K 236 K Sbjct: 400 K 400 >gi|116511680|ref|YP_808896.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris SK11] gi|116107334|gb|ABJ72474.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris SK11] Length = 301 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 11/224 (4%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77 L+ L + + + L +Y+L+ GGK+IR L F++ TA +V A Sbjct: 24 LEHFLTEF--YESAEFPKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAA 81 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SLIHDDLP+MDN RRGK T H ++DE TAI+AG+ L F ++SS + Sbjct: 82 ALEMIHTGSLIHDDLPAMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPFYVLSS--SD 139 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195 L L L + G GM+ GQ+LD+ E + TQ+ I ++KTG L+ F + Sbjct: 140 LSAQTIVSLTRELAYASGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVA 199 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I+A + E E+LR G+ LG+ FQ+ DD+LD +L K Sbjct: 200 AGIVAQKTNQEIEKLRVVGQILGLAFQIRDDILDVTATFAELGK 243 >gi|91777309|ref|YP_552517.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400] gi|91689969|gb|ABE33167.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400] Length = 293 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 82/235 (34%), Positives = 121/235 (51%), Gaps = 11/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ +R++T LD L A+ T L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLERVETALDHYLPGEATEPAT-----LHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 + AF ++S L ++ L+ L G GM GGQ +D+ + TQ+ + Sbjct: 118 QSQAFVALTSD--VLAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRTQLETMH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ R L + +G+ FQ+ DD+LD D Sbjct: 176 RMKTGALLRAAVRMGALAGETPDAAAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230 >gi|28897461|ref|NP_797066.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633] gi|260876421|ref|ZP_05888776.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034] gi|28805673|dbj|BAC58950.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633] gi|308092915|gb|EFO42610.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034] Length = 294 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 129/240 (53%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S + N+++++ L+ L L+ A++Y LLGGK++R FLV Sbjct: 1 MQQTLTSFQERNNQQLNLWLEQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF II+ P + +N R ++ +L H+ G GM GQ LD ++ + + Sbjct: 112 GDALQTLAFTIIADGPLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231 >gi|218132228|ref|ZP_03461032.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC 43243] gi|217992887|gb|EEC58887.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC 43243] Length = 307 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 15/241 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L ++ I+ I+ L + + + A+ Y+++ GGK+IR +++E Sbjct: 10 FKDMLNNKAEAINDIIKGFLP-----AEDTMSCEVEKAMNYSVMAGGKRIRPLIMSEAYK 64 Query: 64 LFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 L + A AA+E IH YSL+HDDLP+MDN RRG+ T H + E I+A Sbjct: 65 LCGGSEECAAQVLHPFMAALEFIHTYSLVHDDLPAMDNDMYRRGQLTTHAAFGEDMGILA 124 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLS---LTHNIGLQGMLGGQMLDIQDEFIDET- 175 G+ LL YA+E + + D R + + + + G+ GM+GGQ LD++ + Sbjct: 125 GDALLNYAYETMLRAACDMTDTYRERSIRAASVIAGKAGIYGMVGGQTLDVKLTGMPMNA 184 Query: 176 -QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 Q+ I ++KTGAL+ A +GAI+A A +L G+ +G+ FQ+ DD+LD D Sbjct: 185 GQLDYIFRLKTGALIEAAFMAGAILAGAPDEVTAKLEKAGDLVGVAFQIQDDILDVTGDA 244 Query: 235 P 235 Sbjct: 245 E 245 >gi|227327511|ref|ZP_03831535.1| geranyltranstransferase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 303 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 132/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 ++L + +R + +L + + L++A+ Y +LLGGK++R FLV Sbjct: 3 DFSTQLNAHYQRTNRMLGHFIASL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVYTTG 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF ++ + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+ Sbjct: 58 ELFGMSLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 117 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P Q+ D R ++ L H G+ GM GGQ D++ E +D + Sbjct: 118 LQTLAFSILADAPMPQVSDRDRLAMISELAHASGVAGMCGGQAFDLEAEGHQVDLAALER 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + +G+ FQ+ DD+LD D Sbjct: 178 IHRHKTGALIRAAVRLGALAAGETGRAALPHLDRYANAIGLAFQVQDDILDVVGDSATTG 237 Query: 236 KK 237 K+ Sbjct: 238 KR 239 >gi|51595290|ref|YP_069481.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 32953] gi|153948033|ref|YP_001402071.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758] gi|186894307|ref|YP_001871419.1| geranyltranstransferase [Yersinia pseudotuberculosis PB1/+] gi|51588572|emb|CAH20180.1| geranyltranstransferase (farnesyldiphosphate synthase) [Yersinia pseudotuberculosis IP 32953] gi|152959528|gb|ABS46989.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758] gi|186697333|gb|ACC87962.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+] Length = 306 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +L + +R++ L D + N L+ A+RY A++GGK++R +LV Sbjct: 9 DFKQQLAAHQQRVNQALLDFIAPL-----PFGNSNLIEAMRYGAVIGGKRLRPYLVYATG 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F ++ AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ Sbjct: 64 QMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILAGDA 123 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179 L T AF I++ P + D R +++ L G GM GQ LD++ E + Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGDLEQ 183 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A A + L + E +G+ FQ+ DD+LD D + Sbjct: 184 IHRHKTGALIRAAVRLGALAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTATIG 243 Query: 236 KK 237 K+ Sbjct: 244 KR 245 >gi|218463158|ref|ZP_03503249.1| geranyltranstransferase protein [Rhizobium etli Kim 5] Length = 304 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 119/236 (50%), Positives = 167/236 (70%), Gaps = 3/236 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++L+ N++ I+ +LD LLL A + + L SA+ YA+L GGK++R FLV E Sbjct: 6 DTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVES 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+L + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TAI+AG+ Sbjct: 66 AALLGGDAKAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHIKFDEATAILAGD 125 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179 LLTYAF+I+++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + Sbjct: 126 SLLTYAFDIVAAPETALPDASKASLVLALARAAGLGGMAGGQALDLAAEKQAQDEAGIIR 185 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GAI+A + Q+++ RLR FGE +G+ FQLADD+LD D Sbjct: 186 LQAMKTGALIRFACEAGAIIAGSPQDDRRRLRAFGEKIGLAFQLADDILDLTSDAA 241 >gi|85058635|ref|YP_454337.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans'] gi|84779155|dbj|BAE73932.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans'] Length = 300 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 86/235 (36%), Positives = 127/235 (54%), Gaps = 10/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 L+ + +++D L+ L A+ L+ A+R+ ALLGGK++R FLV + Sbjct: 3 DFARALENSRQQVDAALERYLSVLANPQAP-----LIQAMRHGALLGGKRLRPFLVYQTG 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF + + AAIECIH YSLIHDDLP+MDN +RRG PT H+++ E TAI+AG+ Sbjct: 58 RLFGLTAASLDAPAAAIECIHAYSLIHDDLPAMDNDALRRGLPTCHVKFGETTAILAGDA 117 Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ + + R Q++ +L G GM GQ LD++ E + ++ Sbjct: 118 LQTLAFSILADVEMPKVSPQDRLQMISALAAASGADGMCLGQALDLEAEGQQVSAARLET 177 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I + KTGAL+ A G + A L F +G+ FQ+ DD+LD D Sbjct: 178 IHRHKTGALIRSAVRMGVLAAGERGGPALRYLDRFAAAIGLAFQVQDDILDVVGD 232 >gi|125624487|ref|YP_001032970.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363] gi|124493295|emb|CAL98263.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363] Length = 301 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 11/224 (4%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77 L+ L + + + L +Y+L+ GGK+IR L F++ TA +V A Sbjct: 24 LEHFLTEF--YESAEFPKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAA 81 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SLIHDDLP+MDN RRGK T H ++DE TAI+AG+ L F ++SS + Sbjct: 82 ALEMIHTGSLIHDDLPAMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPFYVLSS--SD 139 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195 L L L + G GM+ GQ+LD+ E + TQ+ I ++KTG L+ F + Sbjct: 140 LSAQTIVSLTRELAYASGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVA 199 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I+A + E E+LR G+ LG+ FQ+ DD+LD +L K Sbjct: 200 AGIVAQKTNQEIEKLRVVGQILGLAFQIRDDILDVTATFAELGK 243 >gi|302185471|ref|ZP_07262144.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae 642] Length = 295 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 82/241 (34%), Positives = 130/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ LD L A + DRL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALDGLFQAPAPEL-----DRLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|297183903|gb|ADI20025.1| geranylgeranyl pyrophosphate synthase [uncultured gamma proteobacterium EB000_65A11] Length = 321 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 15/232 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M+ + ++ + +D ++ L+ T + + + L+ A GGK++R LV Sbjct: 1 MDHPFYTTVKTDFSAVDVLIKSSLV-TRVPLVEEISTYLIEA------GGKRLRPLLVLL 53 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A N + + IE +H L+HDD+ +D +RRG+ TV+ + +++ G Sbjct: 54 AARACNYQQHQHINLATIIEFLHTAMLLHDDV--VDESDLRRGRKTVNAAWGNPASVLVG 111 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + L + AFE++ ++R +LS N +G + Q+ +I++ E + Sbjct: 112 DFLHSRAFEMMVEIG-----DLRVMEILSHATNTIAEGEV-QQLGNIRNPDATEQSYIEV 165 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L A SGA++A AS ++ L+ +G +LG+ FQL DD+LD E Sbjct: 166 INRKTAMLFEAASHSGAVLAGASPEQELSLQQYGCHLGVAFQLIDDILDYEG 217 >gi|304413337|ref|ZP_07394810.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola LSR1] gi|304284180|gb|EFL92573.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola LSR1] Length = 327 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 23/234 (9%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL------------GGKKIRSFLVTECASLF 65 +ILD++ TA M T ND + +R + GGK+IR + A Sbjct: 6 SILDEVKELTAKDMATV-NDTIEEQMRSDVALITEISHYIINNGGKRIRPMIAILVAQAL 64 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + + IE IH +L+HDD+ +DN +RRGK TV+ Q+ +++ G+ + T Sbjct: 65 GYKGNQHITIAVLIEFIHTATLLHDDV--VDNSDLRRGKATVNAQFGNAASVLVGDFIYT 122 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 AF++++ + +R ++S N+ +G + Q+++ +D I E + KT Sbjct: 123 RAFQMMTQLGS-----MRVLEVMSTATNMIAKGEV-QQLINCKDPRITEENYLSVIGSKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPKK 237 L A +S AI+A A++ ++ L+ +G ++GI FQL DDLLD E KK Sbjct: 177 AKLFEAASQSSAILAGANKEKELALQRYGHHIGIAFQLIDDLLDYSPENSTGKK 230 >gi|281423539|ref|ZP_06254452.1| polyprenyl synthetase [Prevotella oris F0302] gi|281402359|gb|EFB33190.1| polyprenyl synthetase [Prevotella oris F0302] Length = 323 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 73/235 (31%), Positives = 118/235 (50%), Gaps = 22/235 (9%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 +E +++ LD+L + L ++Y L +GGK+IR L+ LF + Sbjct: 4 EELLVKVNDFLDNLKYD-------RKPSGLYDPVKYVLSMGGKRIRPVLMLLSYGLFKDD 56 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + L A+E H Y+L+HDDL MDN +RRG TVH ++D TAI++G+ +L A+ Sbjct: 57 VESVLMPACALETYHNYTLLHDDL--MDNADMRRGHETVHRKWDANTAILSGDSMLVLAY 114 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKT 185 E ++ ++ T + GQ D++ E + E + + ++KT Sbjct: 115 ERMAKCNPVYLSDVL------HTFTETALEIGEGQQYDMEFETRNDVTEDEYIEMIRLKT 168 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 L+ A + GAI+A AS+ +++ L FGE +G+ FQL DD LD D KK Sbjct: 169 SVLLACAQKIGAILAGASKQDQDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 223 >gi|187921415|ref|YP_001890447.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN] gi|187719853|gb|ACD21076.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN] Length = 293 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 81/235 (34%), Positives = 122/235 (51%), Gaps = 11/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ +R++T L+ L A+ T L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLERVETALEYYLPTEATEPAT-----LHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 + AF ++S L ++ L+ L G GM GGQ +D+ + TQ+ + Sbjct: 118 QSQAFVSLTSD--VLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ + R L + +G+ FQ+ DD+LD D Sbjct: 176 RMKTGALLRAAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230 >gi|34498146|ref|NP_902361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472] gi|34104001|gb|AAQ60361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472] Length = 298 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 88/238 (36%), Positives = 129/238 (54%), Gaps = 9/238 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 N + + ++ L+ LL RL A+RYA L GGK++R LV Sbjct: 3 NESFIGWMTSIQQYMEQALEKLLPSADCA-----PQRLHEAMRYATLEGGKRVRPLLVFA 57 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L R+GAA+E +H YSL+HDD+P MDN +RRGKPT HI YD+ TA++ G Sbjct: 58 AGELVGAQADNLARIGAALEMVHAYSLVHDDMPCMDNDVLRRGKPTCHIAYDDATALLVG 117 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVF 178 + L T AFE+IS P + + +++ +L H G GM GGQ +D+ + T ++ Sbjct: 118 DALQTRAFELISQPMPDIAPASQLEMVRALAHAAGHAGMAGGQAIDLASVGLPLTLPELE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A +G++ S EKE L F + +G+ FQ+ DD+LDCE D Sbjct: 178 FMHMLKTGALIRAAVLAGSMAGRELSAAEKEALDAFAKRIGLAFQVVDDILDCEADTA 235 >gi|24379060|ref|NP_721015.1| putative farnesyl diphosphate synthase [Streptococcus mutans UA159] gi|24376957|gb|AAN58321.1|AE014902_9 putative farnesyl diphosphate synthase [Streptococcus mutans UA159] Length = 289 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 130/235 (55%), Gaps = 15/235 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN- 66 +++ K I+ + + QT + L+ A+ Y++ GGK+IR L+ E F Sbjct: 1 MKDKIKSINQAIKHY------YAQTHVSQDLIEAVLYSVDAGGKRIRPLLLLEILQGFGL 54 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V +V A++E IH SL+HDDLP+MDN RRG+ T H ++ E TAI+AG+ L Sbjct: 55 VLTEAHYQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLD 114 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 F +++ K L+ +I+ +L+ L+ G GM+GGQMLDI+ E ++ Q+ I K Sbjct: 115 PFGLLA--KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 TG L+ F + I+A S+ RLR GE +G+ FQ+ DD+LD +L K Sbjct: 173 TGKLLTFPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGK 227 >gi|323140954|ref|ZP_08075866.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067] gi|322414557|gb|EFY05364.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067] Length = 291 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 78/239 (32%), Positives = 119/239 (49%), Gaps = 14/239 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + K ++ L + + + ++ A+ Y+L+ GGK+IR L+ A Sbjct: 2 DFKAYYANQQKLVENYLKNRIAKKGIS-------KVDEAMEYSLMAGGKRIRPILLMAAA 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L V +E IH YSLIHDDLP MD+ RRG+ T H + E A++AG+G Sbjct: 55 EAVGSKGYNYLPVACGLEMIHTYSLIHDDLPCMDDDDYRRGRLTNHKVFGEAMAVLAGDG 114 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LLT AFE++ K + + + + + G GM+GGQ LD++ E I ++ + Sbjct: 115 LLTLAFEVMLEQKN-VDPKVLIETVREMAMCAGNFGMVGGQGLDLEFEGKKITPEELRKL 173 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KTGAL A GA +A A+ + L F + LG+ FQ+ DD+LD E +L K Sbjct: 174 HAGKTGALFIAAIRGGAHLAGANDQQLLALTKFADLLGLAFQITDDILDVEGTEEELGK 232 >gi|308095603|ref|ZP_05907188.2| geranyltranstransferase [Vibrio parahaemolyticus Peru-466] gi|308125727|ref|ZP_05776964.2| geranyltranstransferase [Vibrio parahaemolyticus K5030] gi|308086887|gb|EFO36582.1| geranyltranstransferase [Vibrio parahaemolyticus Peru-466] gi|308113754|gb|EFO51294.1| geranyltranstransferase [Vibrio parahaemolyticus K5030] Length = 295 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 129/240 (53%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S + N+++++ L+ L L+ A++Y LLGGK++R FLV Sbjct: 2 MQQTLTSFQERNNQQLNLWLEQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 53 ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 112 Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF II+ P + +N R ++ +L H+ G GM GQ LD ++ + + Sbjct: 113 GDALQTLAFTIIADGPLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 172 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D Sbjct: 173 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 232 >gi|269958629|ref|YP_003328416.1| geranyltranstransferase [Anaplasma centrale str. Israel] gi|269848458|gb|ACZ49102.1| geranyltranstransferase [Anaplasma centrale str. Israel] Length = 290 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 86/232 (37%), Positives = 127/232 (54%), Gaps = 4/232 (1%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S +++ + ++ L+Q AS + L A+ Y + GK IRSFL + A +F Sbjct: 10 SDIRQKVEDFSCLVRKELVQIASTKAECPSTVLYEALSYTISNPGKCIRSFLASTSARVF 69 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 V+ LR+GAAIE +H YSL+HDDLPSMDN RRG+ + H ++ E A++ G+ LLT Sbjct: 70 GVSAERTLRLGAAIEAVHAYSLVHDDLPSMDNSPTRRGRESCHTKFGEAVAVLTGDALLT 129 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMK 184 FE++S+ +R +++ L+ G GM+ GQ LDI+ V I ++K Sbjct: 130 LTFELLSTMDEGCA--VRCKIIELLSKACGRCGMVAGQALDIEAHSSTSFEGVRRIHELK 187 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 T L ACE+GA++ AS E+ L +G LG FQ DDL D ED + Sbjct: 188 TARLFSAACEAGAVLGGASTKERAALAEYGSALGCAFQAKDDLNDAGEDSER 239 >gi|297621395|ref|YP_003709532.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044] gi|297376696|gb|ADI38526.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044] Length = 294 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 138/240 (57%), Gaps = 13/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 +N L S + I+ L+ L+ + + L A RYALL GGK+IR L Sbjct: 4 VNHDLTSYI----TLIENKLEALIPSCSGA-----DACLYEAARYALLGGGKRIRPILTL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A LFN + AL AIE IH YS+IHDDLP MD+ RRGKP++H Q++E A++ Sbjct: 55 ATAKLFNADIEAALVPACAIEMIHTYSVIHDDLPCMDDDDFRRGKPSLHKQFNEALAVLT 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 G+ LLT AFE+IS + QL ++ L+ ++ G +GM+GGQ++DI E +D Q+ Sbjct: 115 GDFLLTRAFEVISEDR-QLNVEMQIDLIRTIACASGGKGMIGGQVIDISSEGKGLDLKQL 173 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 + KTGAL+ A E G I+A AS E++ F +++G+ FQ+ DDLLD + K+ Sbjct: 174 QHLHAKKTGALITAAVECGCIVASASDEERQPALQFAQDIGLAFQIVDDLLDITSGVKKR 233 >gi|114766799|ref|ZP_01445733.1| decaprenyl diphosphate synthase [Pelagibaca bermudensis HTCC2601] gi|114540993|gb|EAU44051.1| decaprenyl diphosphate synthase [Roseovarius sp. HTCC2601] Length = 331 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 13/234 (5%) Query: 5 LPSKLQENSKRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 + + +Q+ R+ T+L D + M ++H R+ + + GGK++R L Sbjct: 1 MDTPMQKPHDRLATLLSGDMDGVNALIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTL 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A L + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ Sbjct: 61 ASARLCGYEGPFHVHLAATVEFIHTATLLHDDV--VDESKQRRGRPTANLLWDNKSSVLV 118 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L AF+++ P N+R +LS +G + Q+ QD +E Sbjct: 119 GDYLFARAFQLMVEPG-----NLRVLNILSNAAATIAEGEVL-QLTAAQDLRTNEDIYLQ 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KT AL A E G ++A + + + L +G+ LGI FQ+ DDLLD + D Sbjct: 173 VVRGKTAALFSAATEVGGVIAGVEEEQVQALFDYGDALGIAFQIVDDLLDYQGD 226 >gi|27362941|gb|AAN86974.1| multifunctional geranylgeranyl pyrophosphate synthase [Sulfolobus shibatae B12] Length = 331 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 17/242 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M+ L S + ++ + + + ++ ++ GGK++R ++ Sbjct: 1 MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG Sbjct: 54 SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + L AFE ++ L N + ++I + + GQ +D+ E + E + Sbjct: 112 DYLHAKAFEALNEALKGLDGNTFYKAFSVFINSIEI--ISEGQAMDMSFENRVDVTEEEY 169 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234 + K KT L + G I+ AS + + L +G NLGI FQ+ DD+L D L Sbjct: 170 MQMIKGKTAMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDQKEL 229 Query: 235 PK 236 K Sbjct: 230 GK 231 >gi|114771291|ref|ZP_01448711.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha proteobacterium HTCC2255] gi|114548216|gb|EAU51103.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha proteobacterium HTCC2255] Length = 329 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 17/238 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61 L S L + ++++++ + A+ + + L+ A GGK++R L Sbjct: 7 QDQLASLLNHDMVKVNSLIKKRMASDAAPRIPEVTEHLIDA------GGKRLRPLLTLAA 60 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 61 AEMCGNTSPYHIHLAATVEFIHTATLLHDDV--VDESKQRRGRPTANLLWDNQSSVLVGD 118 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L + +F+++ N+R +L+ +G + Q+ Q+ E + Sbjct: 119 YLFSRSFQLMVETG-----NLRVLDILANASATIAEGEVL-QLTVAQNLSTTEDTYLKVI 172 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + KT AL AC+ G ++++A + + L +G+ LG+ FQ+ DDLLD DL K Sbjct: 173 RGKTAALFGAACKVGGVISNAEEKIIDALASYGDALGVCFQITDDLLDYNGSSADLGK 230 >gi|300071276|gb|ADJ60676.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris NZ9000] Length = 285 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 11/224 (4%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77 L+ L + + + L +Y+L+ GGK+IR L F++ TA +V A Sbjct: 8 LEHFLTEF--YESAEFPKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAA 65 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SLIHDDLP+MDN RRGK T H ++DE TAI+AG+ L F ++SS + Sbjct: 66 ALEMIHTGSLIHDDLPAMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPFYVLSS--SD 123 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195 L L L + G GM+ GQ+LD+ E + TQ+ I ++KTG L+ F + Sbjct: 124 LSAQTIVSLTRELAYASGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVA 183 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I+A + E E+LR G+ LG+ FQ+ DD+LD +L K Sbjct: 184 AGIVAQKTNQEIEKLRVVGQILGLAFQIRDDILDVTATFAELGK 227 >gi|261341013|ref|ZP_05968871.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316] gi|288316878|gb|EFC55816.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316] Length = 299 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 92/242 (38%), Positives = 135/242 (55%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 ++LQ R + L + Q N L+ A+ Y ALLGGK++R FLV Sbjct: 2 DFATELQARVVRANDALRRFIAP-----QPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F ++ T AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+ Sbjct: 57 NMFGISDATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I+S P ++ D R ++ L G+ GM GGQ LD++ E ++ Q+ Sbjct: 117 LQTLAFSILSDAPMVEVSDRYRLAMVSELAMASGVAGMCGGQALDLEAEGRQVNLEQLER 176 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGEQGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|251782890|ref|YP_002997193.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391520|dbj|BAH81979.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 290 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75 +D+ + + ++ L+ AI Y++ GGK+IR ++ E F V+ A + Sbjct: 5 ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F +I+ Sbjct: 65 AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193 +L ++ L+ L+ G GM+GGQMLD+ +++ + Q+ +I KTG L+ F Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPF 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++ A++ + +++L G +G FQ+ DD+LD EDL K Sbjct: 183 KAAALITEQAMTVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228 >gi|15675402|ref|NP_269576.1| putative geranyltranstransferase [Streptococcus pyogenes M1 GAS] gi|71911044|ref|YP_282594.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus pyogenes MGAS5005] gi|13622588|gb|AAK34297.1| putative geranyltranstransferase (farnesyl diphosphate synthase) [Streptococcus pyogenes M1 GAS] gi|71853826|gb|AAZ51849.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus pyogenes MGAS5005] gi|323127694|gb|ADX24991.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 290 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75 +D+ + + ++ L+ AI Y++ GGK+IR ++ E F V+ A + Sbjct: 5 ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F +I+ Sbjct: 65 AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193 +L ++ L+ L+ G GM+GGQMLD+ +++ + Q+ +I KTG L+ F Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPF 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++ A++ + +++L G +G FQ+ DD+LD EDL K Sbjct: 183 KAAALITEQAMTVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228 >gi|94990756|ref|YP_598856.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus pyogenes MGAS10270] gi|94544264|gb|ABF34312.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus pyogenes MGAS10270] Length = 290 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75 +D+ + + ++ L+ AI Y++ GGK+IR ++ E F V+ A + Sbjct: 5 ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F +I+ Sbjct: 65 AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193 +L ++ L+ L+ G GM+GGQMLD+ +++ + Q+ +I KTG L+ F Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++ A++ + +++L G +G FQ+ DD+LD EDL K Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228 >gi|77461227|ref|YP_350734.1| farnesyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1] gi|77385230|gb|ABA76743.1| geranyltranstransferase [Pseudomonas fluorescens Pf0-1] Length = 295 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 134/241 (55%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + + R++ L+ L + RL A+RY+++ GGK++R L Sbjct: 2 IAAYSATSQARVNAALETLFNAPLPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H ++DE AI+AG+GL Sbjct: 57 ALGGKAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + P+ + L +IR Q + +L H G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFSALLDPRLSDLSADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQKALEQM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + + GA+ + A ++E + L+ + + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEVSVKLGALASGCAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|114330832|ref|YP_747054.1| farnesyltranstransferase [Nitrosomonas eutropha C91] gi|114307846|gb|ABI59089.1| Farnesyltranstransferase [Nitrosomonas eutropha C91] Length = 322 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 13/218 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 D ++Q H Q ++ I ++ GGK++R LV A L++ + A +E Sbjct: 18 DNVIQQKLHSQVVLVRQVSEYIIHS--GGKRLRPALVILAAGLYDYKGTHHYNLAAVVEF 75 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH +L+HDD+ +D +RR + T + + +++ G+ L + AF+++ DN Sbjct: 76 IHTATLLHDDV--VDESQLRRNQATANALFGNAASVLVGDFLYSRAFQMMVE-----VDN 128 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +R +L+ N +G + Q+L+ +D ++E + + KT L A GAI+ Sbjct: 129 MRVMEVLADATNTIAEGEVL-QLLNCRDPDVEEENYLQVIRFKTAKLFEAAGRLGAILGG 187 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 A+ E+E L +G +LG FQL DDLLD D K Sbjct: 188 ATPAEEEALAAYGMHLGTAFQLVDDLLDYSGNDHDTGK 225 >gi|126740547|ref|ZP_01756234.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6] gi|126718348|gb|EBA15063.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6] Length = 332 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 116/232 (50%), Gaps = 16/232 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + L + +++++ + M ++H R+ + + GGK++R L A Sbjct: 13 LAATLSSEMEAVNSLI-------QTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 65 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L Sbjct: 66 LCGYEGEHHIKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + +F+++ + ++ +L+ +G + QM + DE + + Sbjct: 124 FSRSFQLMVETGS-----LKVLDILANASATIAEGEVL-QMTAASNLATDEAVYLQVVRG 177 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL A E G ++A AS+ E + L +G+ LGI FQ+ADDLLD + D Sbjct: 178 KTAALFSAATEVGGVIAGASETEIKALFDYGDALGIAFQIADDLLDYQGDSK 229 >gi|19746452|ref|NP_607588.1| geranyltranstransferase [Streptococcus pyogenes MGAS8232] gi|306827052|ref|ZP_07460350.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782] gi|19748654|gb|AAL98087.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS8232] gi|304430798|gb|EFM33809.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782] Length = 290 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 126/226 (55%), Gaps = 9/226 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75 +D+ + + ++ L+ AI Y++ GGK+IR ++ E F V+ A + Sbjct: 5 ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F +I+ Sbjct: 65 AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193 +L ++ L+ L+ G GM+GGQMLD+ +++ + +Q+ +I KTG L+ F Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLSQLSLIHLNKTGKLLTFPF 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++ A++ + +++L G +G FQ+ DD+LD EDL K Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228 >gi|331002440|ref|ZP_08325958.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410256|gb|EGG89690.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon 107 str. F0167] Length = 296 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 15/236 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 +E K+ID+I++ + + N ++++A A+ GGK++R ++ E Sbjct: 3 KEKIKKIDSIIESFF-----YAEDGLNKKVITASNEAIKNGGKRLRPLIMFEIYRAVAGE 57 Query: 69 HLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + AAIE IH +SLIHDDLP+MDN +RRGKPT + Y E AI+AG+ L Sbjct: 58 EYREEIIAPFLAAIEMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLCV 117 Query: 126 YAFEIISSPKTQLKD----NIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179 AFEIIS + D S+ + +L + G GM+GGQ +D + + E + Sbjct: 118 QAFEIISKKMQDVDDINILKRMSKALYTLANATGALGMIGGQCVDVEYCGKRMSEDVLRY 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++KTGAL+ + G I+A A+ E L+ G +G FQ+ DD LD D Sbjct: 178 TYELKTGALLQASFVIGGILAGANDKETRLLKKAGSYIGEAFQIRDDYLDIVADEK 233 >gi|94988855|ref|YP_596956.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429] gi|94992746|ref|YP_600845.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus pyogenes MGAS2096] gi|94542363|gb|ABF32412.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429] gi|94546254|gb|ABF36301.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus pyogenes MGAS2096] Length = 290 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75 +D+ + + ++ L+ AI Y++ GGK+IR ++ E F V+ A + Sbjct: 5 ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F +I+ Sbjct: 65 AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193 +L ++ L+ L+ G GM+GGQMLD+ +++ + Q+ +I KTG L+ F Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++ A++ + +++L G +G FQ+ DD+LD EDL K Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228 >gi|21910690|ref|NP_664958.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315] gi|28895620|ref|NP_801970.1| geranyltranstransferase (farnesyl diphosphate synthase) [Streptococcus pyogenes SSI-1] gi|21904893|gb|AAM79761.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315] gi|28810869|dbj|BAC63803.1| putative geranyltranstransferase (farnesyl diphosphate synthase) [Streptococcus pyogenes SSI-1] Length = 290 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75 +D+ + + ++ L+ AI Y++ GGK+IR ++ E F V+ A + Sbjct: 5 ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F +I+ Sbjct: 65 AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193 +L ++ L+ L+ G GM+GGQMLD+ +++ + Q+ +I KTG L+ F Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++ A++ + +++L G +G FQ+ DD+LD EDL K Sbjct: 183 KAAALVTDQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228 >gi|295695407|ref|YP_003588645.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912] gi|295411009|gb|ADG05501.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912] Length = 295 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 82/238 (34%), Positives = 124/238 (52%), Gaps = 13/238 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L + ++ +D LD L+ + RL A+RY+L GGK++R L Sbjct: 1 MERELREFWEAGARAVDDALDALIP------PGKGAGRLHEAMRYSLFAGGKRLRPLLAM 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AL A+E +H YSLIHDDLP+MD+ RRG+PT H + E A++A Sbjct: 55 AACEGAGGSLREALPAACALELVHTYSLIHDDLPAMDDDDYRRGRPTNHRVFGEAMAVLA 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DET 175 G+ LLT AF +++ K L R +L+ L G GM+GGQ LDI+ D Sbjct: 115 GDALLTLAFGVLA--KAPLPATTRIRLVDELAEASGKDGMVGGQALDIEATGADGQPDPE 172 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + + KTGAL+ + G + A A ++ +RL +G+ +G+ +Q+ DDLLD D Sbjct: 173 LLRDLHRKKTGALIIASLRMGGLCAGADESLLDRLSAYGQAVGLAYQIVDDLLDVGGD 230 >gi|145630745|ref|ZP_01786523.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae R3021] gi|144983627|gb|EDJ91087.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae R3021] Length = 296 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|326572218|gb|EGE22213.1| geranyltranstransferase [Moraxella catarrhalis BC8] Length = 328 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 24/254 (9%) Query: 7 SKLQENSKRIDTILD---DLLLQTASHMQTQH--NDRLLSAIRYALL-GGKKIRSFLVTE 60 + +N+K +D + + L + + TQ + L +A RYA+ GGK++R L Sbjct: 15 TAFIQNAKHLDQVRQWQTEHLPKLLDLILTQASLPEPLNAACRYAMSNGGKRVRPLLALS 74 Query: 61 CASLF--NVNHLTAL-----------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + +H R A+E IH YSLIHDDLP MD+ +RRG+PT Sbjct: 75 TFLMLIQTGDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTC 134 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 HI Y E A++AG+ L + AFE++S + + L+ + + M+ GQMLDI Sbjct: 135 HIVYGEDIALLAGDALQSIAFEVLSEYYEEAPADEAVAYRLTQILSTRARRMVSGQMLDI 194 Query: 168 QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + E + + ++ I + KTGAL+ + GA+ A A L+ + +G+ FQ+ D Sbjct: 195 KGENQVLTQDELEAIHRDKTGALIEASVMMGAVCAGAQTAALGHLKRYARAIGLAFQVQD 254 Query: 226 DLLDCEED---LPK 236 D+LD D L K Sbjct: 255 DVLDITTDTITLGK 268 >gi|50914597|ref|YP_060569.1| dimethylallyltransferase [Streptococcus pyogenes MGAS10394] gi|50903671|gb|AAT87386.1| Dimethylallyltransferase [Streptococcus pyogenes MGAS10394] Length = 290 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75 +D+ + + ++ L+ AI Y++ GGK+IR ++ E F V+ A + Sbjct: 5 ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F +I+ Sbjct: 65 AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193 +L ++ L+ L+ G GM+GGQMLD+ +++ + Q+ +I KTG L+ F Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++ A++ + +++L G +G FQ+ DD+LD EDL K Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228 >gi|56808396|ref|ZP_00366148.1| COG0142: Geranylgeranyl pyrophosphate synthase [Streptococcus pyogenes M49 591] Length = 290 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75 +D+ + + ++ L+ AI Y++ GGK+IR ++ E F V+ A + Sbjct: 5 ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F +I+ Sbjct: 65 AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193 +L ++ L+ L+ G GM+GGQMLD+ +++ + Q+ +I KTG L+ F Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++ A++ + +++L G +G FQ+ DD+LD EDL K Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228 >gi|330505134|ref|YP_004382003.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01] gi|328919420|gb|AEB60251.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01] Length = 295 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 74/236 (31%), Positives = 130/236 (55%), Gaps = 10/236 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + + R+DT L+ L + + +RL A+RY+++ GGK++R LV Sbjct: 2 IAAYQKRCQTRVDTALEQLFQAPRTEL-----ERLYQAMRYSVMNGGKRVRPLLVYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE +AI+AG+ L Sbjct: 57 ALEGDIERADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF +++ + ++ R Q++ L+ G GM+GGQ +D+ +D+ + ++ Sbjct: 117 QSLAFGVLADRRRNPQNTETRLQMVELLSQAAGPAGMVGGQAIDLGSVGLQLDQQALEIM 176 Query: 181 QKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ + GA+ + + ++ L + +G+ FQ+ DD+LD E D Sbjct: 177 HRHKTGALIEASVALGALASGNTDELARKALLQYSRAIGLAFQVQDDILDVESDTA 232 >gi|326803324|ref|YP_004321142.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a] gi|326650194|gb|AEA00377.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a] Length = 299 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 83/235 (35%), Positives = 133/235 (56%), Gaps = 9/235 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L+ ID L+ L+ +H+ D LL+++RY+L GGK++R L+ + FN Sbjct: 3 LKSFRHSIDKDLEAALI---AHLGQDSQDSLLASMRYSLENGGKRLRPSLLLATLASFNY 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ L A+E IH YSLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ LLT A Sbjct: 60 DYHLGLAPACAVEYIHTYSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDALLTLA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 FE++S + + ++ +L+ L G GM+ GQ+LD+ E + ++ + KT Sbjct: 120 FEVLSQSQEETDPQLKLELVQLLAQAAGKSGMVDGQVLDMSSEEKHLTIEELKNLHGKKT 179 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPKK 237 GAL+ FA + A++ Q ++ L + + GI +Q+ +DL + E+ KK Sbjct: 180 GALIHFAIMAAALIMDLDQAAQDSLASYAHHFGIAYQIQNDLQEVMWNDEERGKK 234 >gi|218289630|ref|ZP_03493850.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218240280|gb|EED07463.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 291 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 81/231 (35%), Positives = 120/231 (51%), Gaps = 9/231 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63 + + L+ + ++ +L L T H RL A+ Y+L+ GK++R LV A Sbjct: 1 MQTYLEACKEAVNALLARLFEPTGLHA------RLKEAMNYSLMADGKRLRPALVIATAE 54 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F V L AA+E IHCYSLIHDDLP MD+ +RRG+PT H+ + E A++AG+ L Sbjct: 55 TFGVPRDRVLPAAAAVELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDAL 114 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT AF +++ P + + ++ +L G+ GM+GGQ +DI+ V I Sbjct: 115 LTEAFHLLARPLEGVPAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVDFIH 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L+ E G A + L C+GE LG+ FQ+ DD+LD Sbjct: 175 LHKTARLIQACVEIGGYFADLDDQVRWALSCYGECLGLAFQMIDDVLDVTA 225 >gi|158426076|ref|YP_001527368.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571] gi|158332965|dbj|BAF90450.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571] Length = 311 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 93/229 (40%), Positives = 134/229 (58%), Gaps = 10/229 (4%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV 75 + L + L + L++A+R+ +L GGK++R LV E A+LF V A+ Sbjct: 20 EQRLIEALADAPLEGERTRPSHLMAAMRHGSLDGGKRLRPLLVVESAALFGVPLARAITA 79 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+EC+HCYSLIHDDLP+MDN +RRG+PTVH+ + E TAI+AG+GLLT AF++++ Sbjct: 80 AAALECVHCYSLIHDDLPAMDNDLLRRGRPTVHVAFGEETAILAGDGLLTLAFDLLAGED 139 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---------IDETQVFMIQKMKTG 186 +R L+ L G+ GM+GGQMLD+ E + E + +Q MKTG Sbjct: 140 AHPDAQVRIALVRLLARASGIGGMVGGQMLDLAAEGRFSGGTPQALSEADIRTLQAMKTG 199 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 AL+ E GA++ A + L +G LG+ FQ+ADD+LD E D Sbjct: 200 ALLRAGVEMGALLGGADAEARAALAAYGTALGVAFQIADDILDIEGDAA 248 >gi|119384763|ref|YP_915819.1| trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222] gi|119374530|gb|ABL70123.1| Trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222] Length = 333 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 9/233 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN + L S + +D + M ++H R+ + + GGK++R LV Sbjct: 3 MNENVSKPLDRLSAELAGDMDRVNALIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLVL 62 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A L + + + AA+E IH +L+HDD+ +D RRG+PT ++ +D ++++ Sbjct: 63 AAARLCGYAGESHILLAAAVEFIHTATLLHDDV--VDESQQRRGRPTANLLWDNKSSVLV 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L +F++++ ++ ++ +L+ +G + Q+ QD E Sbjct: 121 GDYLFARSFQLMADTES-----MQVMRILANASATIAEGEVL-QLTAAQDVSTTEDTYIQ 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I + KT AL A E+GA++A A + L +G+ LGI FQ+ DDLLD Sbjct: 175 IVRGKTAALFSAATEAGAVVAGADPAVQRALFDYGDALGIAFQIVDDLLDYGG 227 >gi|299141403|ref|ZP_07034540.1| polyprenyl synthetase [Prevotella oris C735] gi|298577363|gb|EFI49232.1| polyprenyl synthetase [Prevotella oris C735] Length = 323 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 22/235 (9%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 +E +++ LD+L + L + ++Y L +GGK+IR L+ LF + Sbjct: 4 EELLVKVNDFLDNLKYD-------RKPSGLYAPVKYVLSMGGKRIRPVLMLLSYGLFKDD 56 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + L A+E H Y+L+HDDL MDN +RRG TVH ++D TAI++G+ +L A+ Sbjct: 57 VESVLMPACALETYHNYTLLHDDL--MDNADMRRGHETVHRKWDANTAILSGDSMLVLAY 114 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKT 185 E ++ ++ T + GQ D++ E + E + + ++KT Sbjct: 115 ERMAKCNPVYLSDVL------HTFTETALEIGEGQQYDMEFETRNDVTEDEYIEMIRLKT 168 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 L+ A + GAI+A AS+ +++ L FGE +G+ FQL DD LD D KK Sbjct: 169 SVLLACAQKIGAILAGASKQDQDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 223 >gi|150399805|ref|YP_001323572.1| polyprenyl synthetase [Methanococcus vannielii SB] gi|150012508|gb|ABR54960.1| Polyprenyl synthetase [Methanococcus vannielii SB] Length = 317 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 78/229 (34%), Positives = 116/229 (50%), Gaps = 19/229 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 + +ID+ L++ + + + L +A ++ L GGK+IR +L L + Sbjct: 5 RAILSKIDSELENYVEK---------DTNLYNASKHLLFAGGKRIRPYLSVLTYLLKRDD 55 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L ++E IH Y+LIHDD+ MDN RRGKPTVHI Y E TAI+AG+ L AF Sbjct: 56 ISEVLAPAISVELIHNYTLIHDDI--MDNDDERRGKPTVHIVYGEPTAILAGDLLYAKAF 113 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTG 186 E +S+ K + +LS + GQ D++ +EF + + KTG Sbjct: 114 EALSNIGDS-KKALEVLKVLSKA----CVEVCEGQTDDMEFENEFPTLEEYLSMISKKTG 168 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 AL+ E GAIMA S E+E L + + +G+ FQ+ DD+LD D Sbjct: 169 ALIVAPIEIGAIMAECSSEEREALYNYAKRIGMTFQIQDDVLDLIGDQK 217 >gi|68250030|ref|YP_249142.1| geranyltranstransferase [Haemophilus influenzae 86-028NP] gi|145632792|ref|ZP_01788525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 3655] gi|145634984|ref|ZP_01790691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittAA] gi|68058229|gb|AAX88482.1| geranyltranstransferase [Haemophilus influenzae 86-028NP] gi|144986448|gb|EDJ93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 3655] gi|145267850|gb|EDK07847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittAA] Length = 296 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NALLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|21672714|ref|NP_660781.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008653|sp|Q8K9A0|ISPA_BUCAP RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|21623357|gb|AAM67992.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 294 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 77/227 (33%), Positives = 125/227 (55%), Gaps = 10/227 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTAL 73 RI+ L +++ + + L A++Y+ L GGK++R+ L+ F VN Sbjct: 13 RINKKLFEIIQEL-----PFQDSVLFRAMKYSTLSGGKRLRACLIYATGETFQVNIAALD 67 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + AA+E +H YSLIHDDLP +DN Y RRGK + HI+Y E A++AG+ L AF I+S+ Sbjct: 68 VISAAVELVHSYSLIHDDLPCIDNDYFRRGKISCHIKYGENFALLAGDALQGLAFNILSN 127 Query: 134 PKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 + D+IR +++ ++ IG GM GQMLD++ E I+ +++ I KT L+ Sbjct: 128 SNMPGVHDSIRLKMIAEFSNAIGYSGMCIGQMLDLEKERKKINISELEKINLYKTAFLIR 187 Query: 191 FACESG-AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + S+ L F ++G+ FQ+ DD+LD + D+ K Sbjct: 188 CSIRLAYFASNNFSKEVLFILDKFSVSIGLAFQIQDDILDLKNDIKK 234 >gi|320161454|ref|YP_004174678.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1] gi|319995307|dbj|BAJ64078.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1] Length = 338 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 21/244 (8%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL----------LGGKKIR 54 L +QE RI+ L ++ T+S + +L + +RY L GK+IR Sbjct: 3 LNQVVQEMLPRIEEELRQVIEATSSP----NTPQLSAMLRYHLGWEGEGTGQEAQGKRIR 58 Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 LV A AL AA+E +H +SLIHDD+ D +RRG+PTV +++ Sbjct: 59 PLLVLLSAQAVGGKWEQALPAAAAVELVHNFSLIHDDIQ--DQSTLRRGRPTVWVKWGIA 116 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID- 173 AI AG+ + T AF ++ + + + S + + GQ LD+ E +D Sbjct: 117 QAINAGDAMFTQAFWALNRLEQTISSQTALE--ASRILHQVCLRLTEGQYLDLAYEKVDT 174 Query: 174 --ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + + KT AL+ E G + +HAS ++ LR FGENLG+ FQ+ DD L Sbjct: 175 LPLEAYWPMVGGKTAALLGGCVELGGLCSHASPEQRTALREFGENLGLAFQVLDDWLGIW 234 Query: 232 EDLP 235 D Sbjct: 235 GDAA 238 >gi|50120071|ref|YP_049238.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043] gi|49610597|emb|CAG74042.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043] Length = 303 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 ++L + +R + +L + + L++A+ Y +LLGGK++R FLV Sbjct: 3 DFSAQLNAHYQRTNRMLGHFITSL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVYTTG 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF++ + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E TAI+AG+ Sbjct: 58 ELFDMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEATAILAGDA 117 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P TQ+ D R ++ L G+ GM GGQ D++ E ++ + Sbjct: 118 LQTLAFSILADAPMTQVSDRDRLAMISELAQASGVAGMCGGQAFDLEAEGHQVNLAALER 177 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A A ++ L + +G+ FQ+ DD+LD D Sbjct: 178 IHRHKTGALIRAAVRLGALAAGDAGRDALPYLDRYANAIGLAFQVQDDILDVVGDSATTG 237 Query: 236 KK 237 K+ Sbjct: 238 KR 239 >gi|90408168|ref|ZP_01216336.1| geranyltranstransferase [Psychromonas sp. CNPT3] gi|90310698|gb|EAS38815.1| geranyltranstransferase [Psychromonas sp. CNPT3] Length = 296 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 80/233 (34%), Positives = 122/233 (52%), Gaps = 9/233 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L L + R D L + +Q+ L A+ + ALLGGK+IR FLV Sbjct: 4 LLKTLSQYQSRTDQQLTKYI-----DLQSPLCLSLNKAMYHGALLGGKRIRPFLVYVVGD 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + T + A+EC+H YSLIHDDLP+MD+ +RRG+ T HI + E AI+AG+ L Sbjct: 59 MLGSQLSTLDPIACALECMHAYSLIHDDLPAMDDDALRRGQATCHIVFGEAQAILAGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 + AF+I+S +L + + +++ L G +GM GQ LD +++ +D T + I Sbjct: 119 QSLAFDILSQENKELSCSAQLKMLNVLAKASGDKGMCAGQALDLAAENKRVDLTMLESIH 178 Query: 182 KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTGAL+ A E + K+ L + +G+ FQ+ DD+LD D Sbjct: 179 RAKTGALIQAAVELATLTKVGLDSQHKQYLLTYARAIGLAFQVQDDILDITSD 231 >gi|259415043|ref|ZP_05738965.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B] gi|259348953|gb|EEW60707.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B] Length = 336 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 9/225 (4%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 ++ + + L+ + L M ++H R+ + + GGK++R L A + Sbjct: 18 AETLASELEAVNLLIQERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYEGDH 77 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 L++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L +F+++ Sbjct: 78 HLKLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLM 135 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 + +R +L+ +G + QM D E + + KT AL Sbjct: 136 VDTGS-----LRVLDILANASATIAEGEVL-QMTAATDLRTTEEIYLQVVRGKTAALFSA 189 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A E G ++A A+ + + L +G+ LGI FQ+ADDLLD + D K Sbjct: 190 ATEVGGVIASATDAQVKALYDYGDALGIAFQIADDLLDYQGDTAK 234 >gi|300024283|ref|YP_003756894.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299526104|gb|ADJ24573.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 301 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 100/239 (41%), Positives = 141/239 (58%), Gaps = 13/239 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66 +L + ++ L + L + ++ RL A+R+A L GGK+ R FLV E A LF Sbjct: 7 QLGNAATAVEGFLAECLTEQQAN---GTPPRLADALRHAVLAGGKRFRPFLVFESAGLFG 63 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V AL AA+ECIHCYSL+HDDLP+MDN +RRG+PTV YDE TAI+ G+ L Sbjct: 64 VARDAALPAAAALECIHCYSLVHDDLPAMDNDELRRGQPTVWKAYDEWTAILVGDALQAI 123 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE------TQVFMI 180 AFE+ S P+ R++L +L G GM+GGQMLD++ + + + + Sbjct: 124 AFELTSDPRRHDDAEARAELTHALAIASGAIGMVGGQMLDLEAGRLPDQPAATIADIVRL 183 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 Q MKTG L+ CE GAI+ AS +++ L+ +GE+LG FQ++DDLLD E D+ K Sbjct: 184 QAMKTGRLITVGCEMGAILGRASPSDRAALKTYGEHLGTAFQISDDLLDAEGSAADVGK 242 >gi|315652073|ref|ZP_07905074.1| geranyltranstransferase [Eubacterium saburreum DSM 3986] gi|315485720|gb|EFU76101.1| geranyltranstransferase [Eubacterium saburreum DSM 3986] Length = 297 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 15/236 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 +++ +I+ +++ + + + N ++ A A+ GGK++R ++ E + + Sbjct: 4 KDSLSKIEKLIESFF-----YNEDELNKNVIKASNEAIRNGGKRLRPLIMFETYKAISGD 58 Query: 69 HLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + + AAIE IH +SLIHDDLP+MDN +RRGKPT + Y E AI+AG+ L Sbjct: 59 EYSEEIIAPFLAAIEMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLSV 118 Query: 126 YAFEIISSPKTQLKD----NIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM 179 AFEIIS + D S+ M +L G GM+GGQ +D++ + + E + Sbjct: 119 QAFEIISKKMQETDDFNILKRMSRAMYTLARATGAFGMIGGQCVDVEYSGKKMTEEVMKY 178 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +KTGAL+ + G I+A AS+ E L+ G +G FQ+ DD LD D Sbjct: 179 TYALKTGALLAASFVVGGILAGASETEVRLLKKAGSYVGEAFQIRDDYLDIVADEK 234 >gi|71903832|ref|YP_280635.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180] gi|94994734|ref|YP_602832.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus pyogenes MGAS10750] gi|71802927|gb|AAX72280.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180] gi|94548242|gb|ABF38288.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus pyogenes MGAS10750] Length = 290 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75 +D+ + + ++ L+ AI Y++ GGK+IR ++ E F V+ A + Sbjct: 5 ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F +I+ Sbjct: 65 AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193 +L ++ L+ L+ G GM+GGQMLD+ +++ + Q+ +I KTG L+ F Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++ A++ + +++L G +G FQ+ DD+LD EDL K Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228 >gi|303237329|ref|ZP_07323899.1| polyprenyl synthetase [Prevotella disiens FB035-09AN] gi|302482716|gb|EFL45741.1| polyprenyl synthetase [Prevotella disiens FB035-09AN] Length = 324 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 119/227 (52%), Gaps = 18/227 (7%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 TI+++ L + + L I+Y L LGGK+IR L+ +L+ N T L Sbjct: 9 TIVNEYLNNLPYN---RKPSSLYEPIKYVLDLGGKRIRPILMMLSYNLYKENPKTILSSA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E H Y+L+HDDL MD +RRG+ TVH +++ AI++G+ +L A+E ++ Sbjct: 66 CALETYHNYTLLHDDL--MDEAPLRRGQQTVHTKWNNNQAILSGDSMLVLAYERLAQ--- 120 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFAC 193 D Q +L+L LQ + GQ D++ E ++ + + ++KT L+ A Sbjct: 121 --VDTKHLQAVLNLFTETALQ-IGEGQQYDMEFEHRNDVTVDEYIEMIRLKTSVLLACAT 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GA++A AS + E L FGE +G+ FQL DD LD D KK Sbjct: 178 KMGALLADASAEDAENLYKFGEQIGLAFQLQDDYLDVYGDSKVFGKK 224 >gi|227510476|ref|ZP_03940525.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190128|gb|EEI70195.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 307 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 125/239 (52%), Gaps = 12/239 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L ++E + RI+ +L+ + Q +L ++ Y++ GGK++R L Sbjct: 4 MGTKLNEFIKEWTPRINQVLESKIEQ------DTDQQKLFESMSYSVNAGGKRLRPLLTI 57 Query: 60 ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 FN + L+ A+E +H YSLIHDDLP+MDN +RRGKPT H Y A + Sbjct: 58 ATLITFNQTITDSILKATCALELLHSYSLIHDDLPAMDNDGLRRGKPTNHTIYGAGMATL 117 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 AG+GL AF+ + L + R QL L+L G +GM GQ DI+ E + + Sbjct: 118 AGDGLQALAFQWVVD--NDLTADTRCQLALALAKAAGPRGMASGQADDIEFEGTRLKLHE 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + + KTGAL+ +A +G IMA +++K+ L F N G FQ+ DD+LD D Sbjct: 176 LQKLDRNKTGALISYAVNAGLIMAQVPKDQKKDLLAFANNFGAAFQIYDDILDIVGDEK 234 >gi|241668001|ref|ZP_04755579.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876535|ref|ZP_05249245.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842556|gb|EET20970.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 293 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 123/222 (55%), Gaps = 8/222 (3%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 ++ + A + +L A++Y+ GGK+IR+ V FN++ ++ AIE Sbjct: 11 NIFSEKAFSEIQSPSKKLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCHKIAFAIE 70 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 CIH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L + FEII++ Sbjct: 71 CIHTYSLIHDDLPAMDNDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINTLDINDIY 130 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 ++ ++ GL+GM+GGQ +D +++ + + ++ KT + + I Sbjct: 131 KLKKVNIV-FAKCCGLEGMVGGQQLDIDGENQNLKLQDLEILHINKTAKMFRASIVLPYI 189 Query: 199 MAHASQNEKER-LRCFGENLGIIFQLADDLLDC---EEDLPK 236 ++ + +E E L + +G+ FQ+ DD+LD ++L K Sbjct: 190 VSKYNNDEFEAILTKVSDLIGLCFQIKDDILDVTRSTQELGK 231 >gi|145629449|ref|ZP_01785247.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 22.1-21] gi|144978292|gb|EDJ88056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 22.1-21] Length = 296 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 92/238 (38%), Positives = 133/238 (55%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ S +N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIES-----YNAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|257899149|ref|ZP_05678802.1| polyprenyl synthetase [Enterococcus faecium Com15] gi|257837061|gb|EEV62135.1| polyprenyl synthetase [Enterococcus faecium Com15] Length = 296 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 7/218 (3%) Query: 20 LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVG 76 L + + S + DR L A+ Y++ GGK+IR L+ + F+ +V Sbjct: 11 LPAVEKEILSFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVA 70 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS Sbjct: 71 AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMA-- 128 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 L + + L+ L G QGM+ GQ DI+ E + ++ I + KTG L+ +A Sbjct: 129 HLGHSPKLLLLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALL 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +G I+A + L+ E+LG+ FQ+ DDLLD Sbjct: 189 AGGILAKQPEEILLLLQRLAEHLGLAFQIRDDLLDVIG 226 >gi|332884305|gb|EGK04573.1| hypothetical protein HMPREF9456_00900 [Dysgonomonas mossii DSM 22836] Length = 325 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 15/229 (6%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 D IL + + + L I Y L LGGK++R L +L+ + + Sbjct: 7 FDEILSIVNTEIKKIEYSSAPKSLFEPISYILSLGGKRVRPALSLMSYNLYKEDVERVIP 66 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + IE H ++L+HDDL MD +RRG PTVHI++++ TA+++G+ +L A++ I+ Sbjct: 67 IALGIEIFHNFTLLHDDL--MDRADMRRGNPTVHIKWNDNTAVLSGDAMLIEAYKEIAKI 124 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191 D+ + +L L + GQ D++ E + + + ++KT L+ Sbjct: 125 -----DSQYLKPVLDLFSTTAT-EICCGQQYDMEFEQRMDVTIAEYLEMIRLKTAVLLAC 178 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + + GAI+A AS + E L +G ++G+ FQL DDLLD D KK Sbjct: 179 SLKEGAIVAGASAEDAENLYNYGIHVGLGFQLMDDLLDVYGDSSNFGKK 227 >gi|313669268|ref|YP_004049552.1| geranyltranstransferase [Neisseria lactamica ST-640] gi|313006730|emb|CBN88200.1| geranyltranstransferase [Neisseria lactamica 020-06] Length = 298 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA+L GGK++R LV Sbjct: 4 TNDLKTWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAVLDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G Sbjct: 59 ASELGESVADAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178 + L T AF+++S P T+L + ++ L G GM GGQ +D+ + + + + Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMAGGQTIDLANVGRQMPQADLE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + +N L + LG+ FQ+ DD+LDCE D Sbjct: 178 QMHSLKTGALIRAAVVLGAMSCPNLPENSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|309379784|emb|CBX21560.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 298 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 129/238 (54%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA+L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAVLDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L H + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G Sbjct: 59 ASELGEAVHEAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178 + L T AF+++S P T+L + ++ L G GM GGQ +D+ + + + + Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMAGGQAIDLANVGRQMPQADLE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 178 QMHSLKTGALIRAAVVLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|253687426|ref|YP_003016616.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754004|gb|ACT12080.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 303 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 84/242 (34%), Positives = 130/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 ++L + +R + +L + + L++A+ Y +LLGGK++R FLV Sbjct: 3 DFSTQLSAHYQRTNRMLGHFIATL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVYTTG 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+ Sbjct: 58 ELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 117 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P Q+ D R ++ L G+ GM GGQ D++ E +D + Sbjct: 118 LQTLAFSILADAPMPQVSDRDRLAMISELAQASGVAGMCGGQAFDLEAEGHQVDLAALER 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ + + L + +G+ FQ+ DD+LD D Sbjct: 178 IHRHKTGALIRAAVRLGALASGETGRAALPHLDRYANAIGLAFQVQDDILDVVGDSATTG 237 Query: 236 KK 237 K+ Sbjct: 238 KR 239 >gi|325134983|gb|EGC57614.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M13399] gi|325202853|gb|ADY98307.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240149] gi|325208846|gb|ADZ04298.1| octaprenyl-diphosphate synthase [Neisseria meningitidis NZ-05/33] Length = 324 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|260424661|ref|ZP_05778957.1| geranyltranstransferase [Dialister invisus DSM 15470] gi|260402735|gb|EEW96282.1| geranyltranstransferase [Dialister invisus DSM 15470] Length = 287 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 81/227 (35%), Positives = 132/227 (58%), Gaps = 12/227 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 +D L+ LL+ + +D L ++++Y+L+ GGK+IR L + V+ + Sbjct: 8 VDDALECLLMPSDPA-----HDSLYASMQYSLMAGGKRIRPCLFLVLLDILGVDSNLYIN 62 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V A+EC+H YSLIHDDLP MDN RRGK H +Y A +AG+GLLTYAFE+++ Sbjct: 63 VACALECVHTYSLIHDDLPGMDNDDYRRGKLANHKKYGVGIATMAGDGLLTYAFELLA-C 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 + + R L+ LT G GM+GGQ D E + +++ + + KTG L+C + Sbjct: 122 ENNISFFKRIALIKILTAAAGPAGMVGGQAHDKGAEGKTLSLSELMFLDQCKTGKLICAS 181 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 + + +A S+N+KE + +G+++G++FQ+ DDLLD +++ K Sbjct: 182 LDMASEIAGLSKNDKEAIHTYGKHIGLLFQITDDLLDFNGVFQEMGK 228 >gi|257459231|ref|ZP_05624350.1| geranyltranstransferase [Campylobacter gracilis RM3268] gi|257443616|gb|EEV18740.1| geranyltranstransferase [Campylobacter gracilis RM3268] Length = 357 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 82/220 (37%), Positives = 118/220 (53%), Gaps = 7/220 (3%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH-LTALRVGA 77 D L Q + H A+ Y L GGK R+ L+ S + AL + Sbjct: 81 FKDYLKQNELKAPSFHP-YFEEALNYMLQAGGKHFRAQLLLGVVSTVDERRFEGALAIAM 139 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH YSLIHDDLP+MD+ +RRG+P++H +YDEVTAI+ G+ L T AF I +S Sbjct: 140 ALEMIHTYSLIHDDLPAMDDADLRRGRPSLHKKYDEVTAILVGDALNTDAFLIAASAN-- 197 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195 L D I+ + + +L N G GM+ GQ +D + E + ++++ + KTGAL+ A E Sbjct: 198 LSDEIKIKCIKTLARNAGSGGMVLGQAIDCRFENSPLKQSELEFLHLHKTGALIAAAFEL 257 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 GAI+ L G LG+IFQ+ DD++D D Sbjct: 258 GAIIGGLKDELAHELYKIGLKLGLIFQIEDDIIDATGDEA 297 >gi|254475222|ref|ZP_05088608.1| decaprenyl diphosphate synthase [Ruegeria sp. R11] gi|214029465|gb|EEB70300.1| decaprenyl diphosphate synthase [Ruegeria sp. R11] Length = 406 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 117/230 (50%), Gaps = 16/230 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + L E ++T++ + M ++H R+ + + GGK++R L A Sbjct: 87 LAATLSEEMAAVNTLI-------RTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 139 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L Sbjct: 140 LCGYSGDNHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 197 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 +F+++ + +R +L+ +G + QM D DE + + Sbjct: 198 FARSFQLMVETGS-----LRVLDILANASATIAEGEVL-QMTAASDLATDEDIYLQVVRG 251 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT AL A ++G ++A AS+ E + L +G+ LGI FQ+ADDLLD + D Sbjct: 252 KTAALFSAATQAGGVIAEASEAEVDALYAYGDALGIAFQIADDLLDYQGD 301 >gi|312132100|ref|YP_003999440.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132] gi|311908646|gb|ADQ19087.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132] Length = 319 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 75/229 (32%), Positives = 120/229 (52%), Gaps = 16/229 (6%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 + +R + L+ + +H L I Y L LGGK+IR L A+LF + Sbjct: 2 SLERFSSSLERAFEEQVF---GEHPAELYEPIHYILSLGGKRIRPLLTLLSANLFTKSWE 58 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 TA+ ++E H ++L+HDD+ MD +RRGKPTVH ++D AI++G+ +L A+E+ Sbjct: 59 TAIEPAMSVEVFHNFTLMHDDI--MDQAPLRRGKPTVHHKWDTNRAILSGDVMLVEAYEL 116 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGA 187 +S + L + N + GQ LD+ + E + + + + ++KT Sbjct: 117 LSKLEASLLKKAILRF------NKVAAEVCEGQQLDMLFAEREEVSKEEYLEMIRLKTSV 170 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ ++ E G I+A AS + E L GENLG+ FQ+ DD+LD D PK Sbjct: 171 LVGYSMELGGIVAGASPDACELLYEVGENLGLGFQMTDDILDVYAD-PK 218 >gi|307726551|ref|YP_003909764.1| polyprenyl synthetase [Burkholderia sp. CCGE1003] gi|307587076|gb|ADN60473.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003] Length = 293 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 119/235 (50%), Gaps = 11/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 + +R++ L+ L ++ +L A+RYA+LGG K++R L Sbjct: 3 FEQWTRGVLERVEAALEHYLP-----AESTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 + AF ++S L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVSLTSD--VLAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRAQLETMH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ A R L + +G+ FQ+ DD+LD D Sbjct: 176 RMKTGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230 >gi|209551400|ref|YP_002283317.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537156|gb|ACI57091.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 304 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 118/236 (50%), Positives = 164/236 (69%), Gaps = 3/236 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++L+ N++ I+ +LD LLL A + + L SA+ YA+L GGK++R FLV E Sbjct: 6 DTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVES 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+L + A RVGAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TAI+AG+ Sbjct: 66 AALLGGDDEAARRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGD 125 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179 LLTYAF+II++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + Sbjct: 126 SLLTYAFDIIAAPETALADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 185 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GA++A + ++ RLR FGE +G+ FQLADD+LD D Sbjct: 186 LQAMKTGALIRFACEAGALIAASPPEDRRRLRAFGEKIGLAFQLADDILDLTSDTA 241 >gi|294671407|ref|ZP_06736256.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306884|gb|EFE48127.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 353 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 113/229 (49%), Gaps = 15/229 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + R+D +++ + Q+ + +Q ++SA GGK++R + Sbjct: 37 FQQNLAADLGRVDVVINRAV-QSEVALISQIGTYIISA------GGKRLRPVITILSGRA 89 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 ++ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 90 LGCDNDGLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 147 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + ++ +++ NI +G + Q+++I + I E Q + + K Sbjct: 148 TRAFQLMVGSGS-----MKILEVMADATNIIAEGEVM-QLMNIGNIDITEAQYLQVIQYK 201 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T L A + GAI+A AS ++ LR +G +G FQ+ DD+LD D Sbjct: 202 TAKLFEAAAQVGAILAGASAEQEAALRDYGMYVGTAFQIIDDVLDYSGD 250 >gi|317503704|ref|ZP_07961721.1| geranyltranstransferase [Prevotella salivae DSM 15606] gi|315665225|gb|EFV04875.1| geranyltranstransferase [Prevotella salivae DSM 15606] Length = 323 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 19/228 (8%) Query: 21 DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D+LL++ + DR L ++Y L +GGK+IR L+ LF + + L Sbjct: 4 DELLVKVNDFLSKLRYDRKPSGLYDPVKYVLSMGGKRIRPVLMLLAYGLFKDDVESILMP 63 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 +E H Y+L+HDDL MDN +RRG TVH +++ TAI++G+ +L A+E I+ Sbjct: 64 ACGLETYHNYTLLHDDL--MDNAEMRRGHETVHRKWNANTAILSGDSMLVLAYERIAQCS 121 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 ++ T + GQ D+ E + E + + ++KT L+ A Sbjct: 122 QIYLSDVL------HTFTETALEIGEGQQYDMDFETRNDVTEAEYIEMIRLKTSVLLACA 175 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+A AS+ +++ L FGE +G+ FQL DD LD D KK Sbjct: 176 LKIGAILAGASKQDQDYLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 223 >gi|301170227|emb|CBW29831.1| geranyltranstransferase [Haemophilus influenzae 10810] Length = 296 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 94/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + Q ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDQRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 294 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ L+ L + + +RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str. B076] gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str. race 4] Length = 295 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ L+ L + + +RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|329765808|ref|ZP_08257374.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137651|gb|EGG41921.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 326 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 13/235 (5%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASL 64 +++N+K ++ L+ L + L A + + GGK++R ++V + + Sbjct: 4 EKSIEKNAKIVNKYLNSKL--------KGNPKSLYDAASHLIVHGGKRLRPYMVIKSCQI 55 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N TA+ +A+E IH ++L+HDD+ MDN +R G PTVH ++ AI+AG+ L Sbjct: 56 LGGNTATAMPAASAVEMIHNFTLVHDDI--MDNDEMRHGVPTVHKKFGMPIAILAGDVLF 113 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + A++IIS ++ L+ +G L + + + + K Sbjct: 114 SKAYQIISESNISKDSTVQLVSRLAKACVDVCEGQLLDVKMAEGKRIPTQKEYIAMIGKK 173 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237 T AL +C GAI A +Q + L FG+NLGI FQ+ DDL+ D KK Sbjct: 174 TAALFDVSCSMGAICATNNQKDILNLSNFGKNLGIAFQITDDLIGVMGDSKITKK 228 >gi|298292712|ref|YP_003694651.1| polyprenyl synthetase [Starkeya novella DSM 506] gi|296929223|gb|ADH90032.1| Polyprenyl synthetase [Starkeya novella DSM 506] Length = 305 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 101/207 (48%), Positives = 137/207 (66%), Gaps = 10/207 (4%) Query: 37 DRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 +RL SA+R+ AL GGK++R FLV E A+LF V A+ AA+ECIHCYSL+HDDLP+M Sbjct: 34 ERLASAMRHGALAGGKRLRPFLVIESAALFGVPAAAAMPAAAALECIHCYSLVHDDLPAM 93 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 DN +RRG+PTVH YDE TAI+AG+GLLT AFEI++ + +R L+ SL H G Sbjct: 94 DNDDLRRGQPTVHRAYDEATAILAGDGLLTLAFEILAREEAGPDAEVRIALVASLAHAAG 153 Query: 156 LQGMLGGQMLDIQDEF---------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 + GM+GGQMLD+ E + ++ +Q MKTGAL+ ACE+GA++ A+ E Sbjct: 154 VAGMIGGQMLDLAAEGRFASGRPLDLPAEEIIRLQAMKTGALLRQACEAGALVGRATPEE 213 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233 + L + +G FQ+ADDLLD E + Sbjct: 214 RASLDRYARAVGRAFQIADDLLDVEGE 240 >gi|254805638|ref|YP_003083859.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14] gi|254669180|emb|CBA07918.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14] gi|325145122|gb|EGC67404.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240013] gi|325205404|gb|ADZ00857.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M04-240196] Length = 324 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDEKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|126666697|ref|ZP_01737674.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] gi|126628742|gb|EAZ99362.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17] Length = 322 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 118/227 (51%), Gaps = 12/227 (5%) Query: 13 SKRI-DTILDDLLLQTASHMQTQHNDR--LLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 ++RI DT+ DD +Q +D + +Y + GGK++R LV + N Sbjct: 3 AQRIYDTVADDFSRVNELIIQRLSSDVPMVEKIAQYIIESGGKRLRPLLVLLASRATGYN 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L++ A IE +H +L+HDD+ +D +RRG+ T + ++ +++ G+ L AF Sbjct: 63 EDNHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTANAKWGNAPSVLVGDFLYARAF 120 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E++ ++ + +LS + +G + Q++++++ + E Q + KT L Sbjct: 121 EMMVELES-----LPIMKVLSHATAVIAEGEVM-QLMNVKNPDLTENQYMQVIHNKTAML 174 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + SGA++A A+ ++E L+ +G++LG+ FQL DD+LD D Sbjct: 175 FEASSHSGALLAGANHAQEEALKNYGKHLGLAFQLVDDVLDYRGDAE 221 >gi|293571745|ref|ZP_06682764.1| geranyltranstransferase [Enterococcus faecium E980] gi|291608202|gb|EFF37505.1| geranyltranstransferase [Enterococcus faecium E980] Length = 296 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 7/218 (3%) Query: 20 LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVG 76 L + + S + DR L A+ Y++ GGK+IR L+ + F+ +V Sbjct: 11 LPAVEKEILSFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVA 70 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS Sbjct: 71 AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMA-- 128 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 L + + L+ L G QGM+ GQ DI+ E + ++ I + KTG L+ +A Sbjct: 129 HLGHSPKLLLLQQLAVCAGAQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALL 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +G I+A + L+ E+LG+ FQ+ DDLLD Sbjct: 189 AGGILAKQPEEILLLLQRLAEHLGLAFQIRDDLLDVIG 226 >gi|291514401|emb|CBK63611.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301] Length = 323 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 73/225 (32%), Positives = 119/225 (52%), Gaps = 17/225 (7%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76 + +++ L QT + + L + I Y+L GGK++R L+T +F+ + AL Sbjct: 9 SAIENYLAQTEFPAE---PELLYAPIGYSLAGGGKRLRPMLLTLSCGIFSDDVKQALPAA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E H ++L+HDD+ MDN +RRGKP+VH ++ + AI++G+ ++ YA+ ++SS Sbjct: 66 AAVEVFHNFTLLHDDI--MDNAAVRRGKPSVHAKWGQNVAILSGDAMMIYAYRLLSSVPA 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 L + S T N + GQ D+ E + + + ++KT L+ + Sbjct: 124 NLLPQVLS------TFNTMALEVCEGQQYDMDFEQKPKVSVVEYMHMIELKTSVLLAGSV 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPK 236 GA++ AS + RLR F LG+ FQL DDLLD D L K Sbjct: 178 VIGAMLGGASDEDCRRLRRFAVELGLAFQLQDDLLDSYGDQRLGK 222 >gi|290580921|ref|YP_003485313.1| putative farnesyl diphosphate synthase [Streptococcus mutans NN2025] gi|254997820|dbj|BAH88421.1| putative farnesyl diphosphate synthase [Streptococcus mutans NN2025] Length = 289 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 130/235 (55%), Gaps = 15/235 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN- 66 +++ K I+ + + QT + L+ A+ Y++ GGK+IR L+ E F Sbjct: 1 MKDKIKYINQAIKHY------YAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGL 54 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V +V A++E IH SL+HDDLP+MDN RRG+ T H ++ E TAI+AG+ L Sbjct: 55 VLTEAHYQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGETTAILAGDSLFLD 114 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 F +++ K L+ +I+ +L+ L+ G GM+GGQMLDI+ E ++ Q+ I K Sbjct: 115 PFGLLA--KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 TG L+ F + I+A S+ RLR GE +G+ FQ+ DD+LD +L K Sbjct: 173 TGKLLTFPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGK 227 >gi|145636150|ref|ZP_01791820.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittHH] gi|145270672|gb|EDK10605.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittHH] Length = 296 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 92/238 (38%), Positives = 132/238 (55%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ S N LL A++YALL GGK++R FLV Sbjct: 2 GNFSEELQQVQTRINRFLEAQFEGIESR-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|325267227|ref|ZP_08133890.1| geranyltranstransferase [Kingella denitrificans ATCC 33394] gi|324981288|gb|EGC16937.1| geranyltranstransferase [Kingella denitrificans ATCC 33394] Length = 295 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 84/231 (36%), Positives = 128/231 (55%), Gaps = 6/231 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67 LQ KR+ +++LQ +Q L A+RY AL GGK++R LV + L + Sbjct: 4 LQLWQKRV-AAQTEIILQQKLPQISQEPVVLHEAMRYSALDGGKRLRPLLVWAASQLGDS 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AA+ECIH YSL+HDD+P MDN +RRGKPT H+Q+ + A++ G+ L T A Sbjct: 63 VQAACEAAMAAVECIHVYSLVHDDMPEMDNDQLRRGKPTCHVQFGDAVALLTGDALQTLA 122 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKT 185 F+I+S+ T+L + +++ L G GM GGQ +D+ + D Q + + +KT Sbjct: 123 FDILSAA-TELPAERQLKMVQVLAKASGSLGMAGGQAIDLANVGKDMKQPALEQMHGLKT 181 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 GAL+ A + G + + ++ RL + LG+ FQ+ DD+LDCE D Sbjct: 182 GALIRAAVQLGGLSCPQITADQLARLDAYAAKLGLAFQVIDDVLDCEADTA 232 >gi|146310549|ref|YP_001175623.1| geranyltranstransferase [Enterobacter sp. 638] gi|145317425|gb|ABP59572.1| farnesyl-diphosphate synthase [Enterobacter sp. 638] Length = 299 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 91/242 (37%), Positives = 135/242 (55%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 ++LQ +R + L + Q N L++A+ Y ALLGGK++R FLV Sbjct: 2 DFSTELQACVERANDALRRFI-----EPQPFQNTPLVAAMHYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F ++ T AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+ Sbjct: 57 NMFGISSNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD++ E ++ Q+ Sbjct: 117 LQTLAFSILSDAPMIEVADRDRLAMVSELAMASGVAGMCGGQALDLEAEGHQVNLEQLER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGERGSKALPILDRYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|260431561|ref|ZP_05785532.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis ITI-1157] gi|260415389|gb|EEX08648.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis ITI-1157] Length = 332 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 68/237 (28%), Positives = 119/237 (50%), Gaps = 10/237 (4%) Query: 1 MNGGLPSKLQEN-SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58 M+ G SK E ++ + +D + + M ++H R+ + + GGK++R L Sbjct: 1 MDIGTISKPHERLAELLAGEMDAVNTLIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLT 60 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 A LF +R+ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ Sbjct: 61 LAAARLFGYGGDHHIRLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVL 118 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 G+ L + +F+++ + +R +L+ +G + QM D DE Sbjct: 119 VGDYLFSRSFQLMVETGS-----LRVLDILANASATIAEGEVL-QMTAATDLRTDEAVYL 172 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + KT AL A E G ++A AS+ + L +G+ LGI FQ+ADDLLD + D Sbjct: 173 QVVRGKTAALFSAATEVGGVIAGASEEQVRALFAYGDALGIAFQIADDLLDYQGDSK 229 >gi|118475576|ref|YP_891278.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40] gi|118414802|gb|ABK83222.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40] Length = 277 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 75/218 (34%), Positives = 121/218 (55%), Gaps = 8/218 (3%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIE 80 +L L ND L ++ GGK R+ L+ + +A V AA+E Sbjct: 8 ELNLPKVDSFHPHFNDSLSWVLK---AGGKHFRAKLLLGVVDALKPDLKSASYPVAAAVE 64 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H YSLIHDDLP MDN +RRG T+H++YDEV+A++AG+ L T+AF ++SS L Sbjct: 65 MLHTYSLIHDDLPCMDNADLRRGVATLHVKYDEVSAVLAGDALNTHAFYMLSSAN--LPA 122 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAI 198 + + +L N G+ GM+ GQ +D +++ ++ ++ + KTGAL+ + + GAI Sbjct: 123 EAVVKCVQTLAENGGIYGMVIGQAIDCYFENKHLNLDELKFLHLHKTGALIAASMKMGAI 182 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++ S + E++ G LG+ FQ+ DD++D D K Sbjct: 183 ISAQSDKQCEKIYNIGLKLGLAFQIHDDIIDATSDEMK 220 >gi|22124916|ref|NP_668339.1| geranyltranstransferase [Yersinia pestis KIM 10] gi|45440604|ref|NP_992143.1| geranyltranstransferase [Yersinia pestis biovar Microtus str. 91001] gi|108808661|ref|YP_652577.1| geranyltranstransferase [Yersinia pestis Antiqua] gi|108811077|ref|YP_646844.1| geranyltranstransferase [Yersinia pestis Nepal516] gi|145600070|ref|YP_001164146.1| geranyltranstransferase [Yersinia pestis Pestoides F] gi|149364978|ref|ZP_01887013.1| geranyltranstransferase [Yersinia pestis CA88-4125] gi|162421705|ref|YP_001607439.1| geranyltranstransferase [Yersinia pestis Angola] gi|165926609|ref|ZP_02222441.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. F1991016] gi|165935882|ref|ZP_02224452.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. IP275] gi|166011123|ref|ZP_02232021.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213125|ref|ZP_02239160.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. B42003004] gi|167398812|ref|ZP_02304336.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421520|ref|ZP_02313273.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423513|ref|ZP_02315266.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470229|ref|ZP_02334933.1| geranyltranstransferase [Yersinia pestis FV-1] gi|218930206|ref|YP_002348081.1| geranyltranstransferase [Yersinia pestis CO92] gi|229838781|ref|ZP_04458940.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896065|ref|ZP_04511235.1| geranyltranstransferase [Yersinia pestis Pestoides A] gi|229899349|ref|ZP_04514492.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229901304|ref|ZP_04516426.1| geranyltranstransferase [Yersinia pestis Nepal516] gi|270489496|ref|ZP_06206570.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294504904|ref|YP_003568966.1| geranyltranstransferase [Yersinia pestis Z176003] gi|21957753|gb|AAM84590.1|AE013704_7 geranyltranstransferase [Yersinia pestis KIM 10] gi|45435461|gb|AAS61020.1| geranyltranstransferase [Yersinia pestis biovar Microtus str. 91001] gi|108774725|gb|ABG17244.1| farnesyl-diphosphate synthase [Yersinia pestis Nepal516] gi|108780574|gb|ABG14632.1| farnesyl-diphosphate synthase [Yersinia pestis Antiqua] gi|115348817|emb|CAL21771.1| geranyltranstransferase [Yersinia pestis CO92] gi|145211766|gb|ABP41173.1| farnesyl-diphosphate synthase [Yersinia pestis Pestoides F] gi|149291391|gb|EDM41465.1| geranyltranstransferase [Yersinia pestis CA88-4125] gi|162354520|gb|ABX88468.1| geranyltranstransferase [Yersinia pestis Angola] gi|165916027|gb|EDR34634.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. IP275] gi|165921537|gb|EDR38734.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990123|gb|EDR42424.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205912|gb|EDR50392.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960439|gb|EDR56460.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051316|gb|EDR62724.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057683|gb|EDR67429.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681233|gb|EEO77327.1| geranyltranstransferase [Yersinia pestis Nepal516] gi|229687751|gb|EEO79824.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. India 195] gi|229695147|gb|EEO85194.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700988|gb|EEO89017.1| geranyltranstransferase [Yersinia pestis Pestoides A] gi|262362970|gb|ACY59691.1| geranyltranstransferase [Yersinia pestis D106004] gi|262366890|gb|ACY63447.1| geranyltranstransferase [Yersinia pestis D182038] gi|270338000|gb|EFA48777.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294355363|gb|ADE65704.1| geranyltranstransferase [Yersinia pestis Z176003] gi|320016363|gb|ADV99934.1| geranyltranstransferase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 306 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +L + +R++ L D + N L+ A+RY A++GGK++R +LV Sbjct: 9 DFKQQLAAHQQRVNQALLDFIAPL-----PFGNSNLIEAMRYGAVIGGKRLRPYLVYATG 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F ++ AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ Sbjct: 64 QMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILAGDA 123 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179 L T AF I++ P + D R +++ L G GM GQ LD++ E + Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGDLEQ 183 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA A A + L + E +G+ FQ+ DD+LD D + Sbjct: 184 IHRHKTGALIRAAVRLGAQAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTATIG 243 Query: 236 KK 237 K+ Sbjct: 244 KR 245 >gi|320103326|ref|YP_004178917.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644] gi|319750608|gb|ADV62368.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644] Length = 336 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 89/236 (37%), Positives = 121/236 (51%), Gaps = 15/236 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHN-----DRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67 +RI+T LD LL H RL A RY+ L GGK +R L A Sbjct: 41 QRIETALDALLPPVEEHPNAAGPYGVCPARLARAARYSTLGGGKLLRPKLTLLAAEAVGG 100 Query: 68 NH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + AL A+E +H YSL+HDDLP+MD+ +RRG+PT H+++DE TAI+AG+GLLT Sbjct: 101 DDAIENALAAACAVELVHAYSLVHDDLPAMDDDDLRRGRPTTHVEFDEATAILAGDGLLT 160 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFMI 180 AF + + + + L G +GM+GGQM D+Q E I Q + I Sbjct: 161 LAFGAVVA--GVRPAERAAACVGILAEAAGFRGMVGGQMADLQAESIPREQGSVELLEAI 218 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTGAL+ + GA + A+ L +G LG+ FQ+ DDLLD D K Sbjct: 219 HLRKTGALLRASLTMGAAASGANAELTTALDEYGRALGLAFQIQDDLLDATGDPAK 274 >gi|121593453|ref|YP_985349.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42] gi|120605533|gb|ABM41273.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42] Length = 311 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 9/235 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++ R++ L + A L A+RYA+L GGK++R LV Sbjct: 20 FDFNDWMRAELARVEEALSRWVCHDA-------PAGLGEAMRYAVLDGGKRLRPLLVLAA 72 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + ALR A+E IH YSL+HDD+P MDN +RRGKPTVH+++ E A++AG+ Sbjct: 73 SHAVGGQPEAALRAACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVRFGEARALLAGD 132 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 L AFE+++ L R L+ L + E Q+ + Sbjct: 133 ALQALAFELLTPEDGVPLAMQARLCRELAQAAGAAGMAGGQAIDLASVGLQLSEDQLRHM 192 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +KTGAL+ + GA+ + + L +G +G+ FQ+ DD+LD +D Sbjct: 193 HSLKTGALLQASVVMGAVCGQPTGAALQALTDYGAAMGLAFQVVDDVLDVTQDSA 247 >gi|332796336|ref|YP_004457836.1| farnesyltranstransferase [Acidianus hospitalis W1] gi|332694071|gb|AEE93538.1| farnesyltranstransferase [Acidianus hospitalis W1] Length = 326 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 116/229 (50%), Gaps = 9/229 (3%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69 E K D I+ ++ + +++ + L A Y L GGK++R + + LF+ + Sbjct: 2 ELDKYFDEIIKNVNEEIEKYIKGE-PKELYDASIYLLKAGGKRLRPLITVASSDLFSGDR 60 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A + AA+E +H ++LIHDD+ MD +RRG PTVH+++ AI+AG+ L AFE Sbjct: 61 KRAYKAAAAVEILHNFTLIHDDI--MDEDTLRRGMPTVHVKWGVPMAILAGDLLHAKAFE 118 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTG 186 ++S L + + ++ + + GQ +D++ E + E + + K KT Sbjct: 119 VLSEALEGLDSKRFYMGLSEFSKSVII--IAEGQAMDMEFENRQDVTEEEYLEMIKKKTA 176 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L + G +++ A + E L+ FG NLGI FQ+ DD+L D Sbjct: 177 QLFSCSAFLGGLVSGAEDKDLELLKEFGLNLGIAFQIIDDILGLTADEK 225 >gi|260583060|ref|ZP_05850842.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae NT127] gi|260093911|gb|EEW77817.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae NT127] Length = 296 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GNFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|86134740|ref|ZP_01053322.1| polyprenyl synthetase [Polaribacter sp. MED152] gi|85821603|gb|EAQ42750.1| polyprenyl synthetase [Polaribacter sp. MED152] Length = 323 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 12/217 (5%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 ++ L S Q L + Y L LGGK+IR L A +F ++ AL A+ Sbjct: 8 EEFLSYLESKDWVQEPKNLYEPVDYILKLGGKRIRPVLTLMAADIFGADYNKALPAALAV 67 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E H ++L+HDD+ MD+ +RRGK TVH ++D TAI++G+ +L A++ + K ++ Sbjct: 68 EVFHNFTLVHDDI--MDDAPLRRGKATVHEKWDINTAILSGDAMLILAYKYFENYKPEVF 125 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESG 196 L+ + + GQ LD+ E + + + +KT L+ A + G Sbjct: 126 QK------LAKLFSKTALEVCDGQQLDVDFETRKKVTIDEYLNMICLKTSVLVAAALKMG 179 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 AI+A + + + FG NLG+ FQL DD LD D Sbjct: 180 AIVAESDDKNADLIYDFGLNLGLAFQLQDDYLDTFGD 216 >gi|15897028|ref|NP_341633.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus solfataricus P2] gi|284173372|ref|ZP_06387341.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus solfataricus 98/2] gi|14423727|sp|P95999|GGPS_SULSO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase gi|13813193|gb|AAK40423.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus solfataricus P2] gi|261601682|gb|ACX91285.1| Dimethylallyltranstransferase [Sulfolobus solfataricus 98/2] Length = 332 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 14/237 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61 + L E ++ + + + ++ ++ GGK++R ++ Sbjct: 3 SDDLSLYFNEIVNNVNFRIKNFVKSNFKTLEE-------ASFHLFTAGGKRLRPLVLVSS 55 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + L + A + AA+E +H ++L+HDD+ MDN +RRG PTVH+++ E AI+AG+ Sbjct: 56 SDLIGGDRERAYKAAAAVEILHNFTLVHDDI--MDNDGLRRGLPTVHVKWGEPMAILAGD 113 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 L AFE ++ L N + +I + + GQ +D+ E + E + Sbjct: 114 YLHAKAFEALNEALKGLDGNTFYKAFSIFITSIEI--ISEGQAMDMSFENRLDVTEEEYI 171 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + K KT L + G I+ A+ + ++L +G NLGI FQ+ DD+L D Sbjct: 172 QMIKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVDDILGIIGDEK 228 >gi|303243472|ref|ZP_07329814.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1] gi|302486033|gb|EFL48955.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1] Length = 319 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 78/231 (33%), Positives = 116/231 (50%), Gaps = 20/231 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 +E +ID L+ + + ++ L +A ++ L GGK+IR +L T L N Sbjct: 6 KELLSKIDNELNKYVEK---------DNTLYNASKHLLFAGGKRIRPYLATLTYMLKKDN 56 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L A+E IH Y+LIHDD+ MDN RRG+ TVH++Y E AI+AG+ L AF Sbjct: 57 LDEILPPAVAVELIHNYTLIHDDI--MDNDDERRGRTTVHVEYGEPIAILAGDLLYAKAF 114 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKT 185 E IS+ K K + + + + GQ +D++ E D F + KT Sbjct: 115 EAISNIKDPKKAHEVLK-----ALSKACVEVCEGQAMDMEFEDRDKISLDDYFEMISKKT 169 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 GAL+ E GAIMA + E+ L + + +G+ FQ+ DD+LD D K Sbjct: 170 GALIIAPIEIGAIMAECTDEERNALYEYAKRIGMTFQIQDDVLDLIGDNKK 220 >gi|1707833|emb|CAA69541.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus solfataricus P2] Length = 332 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 14/237 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61 + L E ++ + + + ++ ++ GGK++R ++ Sbjct: 3 SDDLSLYFNEIVNNVNFRIKNFVKSNFKTLEE-------ASFHLFTAGGKRLRPLVLVSS 55 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + L + A + AA+E +H ++L+HDD+ MDN +RRG PTVH+++ E AI+AG+ Sbjct: 56 SDLIGGDRERAYKAAAAVEILHNFTLVHDDI--MDNDGLRRGLPTVHVKWGEPMAILAGD 113 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 L AFE ++ L N + +I + + GQ +D+ E + E + Sbjct: 114 YLHAKAFESLNESLKGLDGNTFYKAFSIFITSIEI--ISEGQAMDMSFENRLDVTEEEYI 171 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + K KT L + G I+ A+ + ++L +G NLGI FQ+ DD+L D Sbjct: 172 QMIKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVDDILGIIGDEK 228 >gi|281421201|ref|ZP_06252200.1| polyprenyl synthetase [Prevotella copri DSM 18205] gi|281404736|gb|EFB35416.1| polyprenyl synthetase [Prevotella copri DSM 18205] Length = 324 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 77/223 (34%), Positives = 114/223 (51%), Gaps = 12/223 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D IL + A+ + L IRY L +GGK+IR L+ +LF N L Sbjct: 5 DEILSMVNEFLANLPYERKPKSLYEPIRYVLSMGGKRIRPTLMLLGYNLFKDNPEKILMN 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E H Y+L+HDDL MDN +RRG TVH ++D TAI++G+ +L A+E ++ Sbjct: 65 AVALETYHNYTLLHDDL--MDNADLRRGHETVHKKWDANTAILSGDSMLVLAYERMAQCD 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFA 192 + + +L + IG GQ D++ E + E + + ++KT L+ A Sbjct: 123 EKHLAKVL-KLFTTTALEIG-----EGQQFDMEFENRNDVKEEEYIEMIRLKTSVLLACA 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GAI+A AS + E L FGE +G+ FQL DD LD D Sbjct: 177 LKMGAILADASDEDAENLYKFGEQIGLAFQLQDDYLDVYGDTK 219 >gi|282881608|ref|ZP_06290277.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1] gi|281304594|gb|EFA96685.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1] Length = 324 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 110/227 (48%), Gaps = 15/227 (6%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69 E K I+ L+ L + L I Y L LGGK+IR L+ +L+ + Sbjct: 6 EMLKLINEQLERL-------SDNREPRHLYEPIEYVLSLGGKRIRPILMMLAYNLYQEHP 58 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 L AIE H Y+L+HDDL MD +RRG TVH ++D TAI++G+ +L A++ Sbjct: 59 EEILMPACAIETYHNYTLLHDDL--MDCADLRRGCATVHKRWDANTAILSGDSMLVLAYQ 116 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTGAL 188 +++ + + + T G +D + + + E + + ++KT L Sbjct: 117 RMATCRADYLKEV----IDLFTQTALEIGEGQQYDMDFEKRDDVTEDEYIEMIRLKTSVL 172 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + A + GAI+ ASQ + E L FGE +G+ FQL DD LD D Sbjct: 173 LACALKIGAILGGASQEDAENLYRFGEKIGLAFQLQDDYLDVYGDTK 219 >gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC 51196] gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC 51196] Length = 300 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 78/233 (33%), Positives = 122/233 (52%), Gaps = 12/233 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L+ + D L+ LL + AIR++ GGK++R L E A Sbjct: 11 LRAGVEATDAALERLLP-----APDAVPSSIHRAIRHSTFAGGKRLRPVLAMEAARTLRR 65 Query: 68 N---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + +GAAIE +H YSLIHDDLP++DN +RRGKPT H+ + E AI+AG+ L Sbjct: 66 DRALPAGVEDLGAAIEMLHTYSLIHDDLPALDNDDLRRGKPTCHVVFGEAIAILAGDALQ 125 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQK 182 T A++ ++ + + +++ ++GM+GGQ+LD++ E V I + Sbjct: 126 TLAYQTLAQLRCPAPATVEIIRLIAEATGT-VEGMIGGQVLDLEGEGTRPTAESVDAIHR 184 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL+ + +G + A A+ + ERL FG G+ FQ+ DD+LD +D Sbjct: 185 AKTGALIRVSIVTGGVYAGATPEDVERLTIFGRKAGLAFQIVDDVLDMTQDSA 237 >gi|328472529|gb|EGF43392.1| geranyltranstransferase [Vibrio parahaemolyticus 10329] Length = 294 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 84/240 (35%), Positives = 128/240 (53%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S + N+++++ L+ L L+ A++Y LLGGK++R FLV Sbjct: 1 MQQTLTSFQERNNQQLNLWLEQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF II+ + +N R ++ +L H+ G GM GQ LD ++ + + Sbjct: 112 GDALQTLAFTIIADGTLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231 >gi|70605942|ref|YP_254812.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius DSM 639] gi|729570|sp|P39464|GGPS_SULAC RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranyltranstransferase gi|506371|dbj|BAA43200.1| geranylgeranyl diphosphate synthase [Sulfolobus acidocaldarius] gi|68566590|gb|AAY79519.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius DSM 639] Length = 330 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 16/235 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 + E ++ I+ + + +L A + GGK++R ++T + Sbjct: 4 FDNYFNEIVNSVNDIIKSYI--------SGDVPKLYEASYHLFTSGGKRLRPLILTISSD 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF A GAAIE +H ++L+HDD+ MD IRRG PTVH++Y AI+AG+ L Sbjct: 56 LFGGQRERAYYAGAAIEVLHTFTLVHDDI--MDQDNIRRGLPTVHVKYGLPLAILAGDLL 113 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 AF++++ L + T +I + + GQ +D++ E I E + + Sbjct: 114 HAKAFQLLTQALRGLPSETIIKAFDIFTRSIII--ISEGQAVDMEFEDRIDIKEQEYLDM 171 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL + GA++A A+ N+ + FG NLGI FQ+ DD+L D Sbjct: 172 ISRKTAALFSASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEK 226 >gi|330978746|gb|EGH77971.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 295 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ LD L + +RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYQAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHPTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|225024258|ref|ZP_03713450.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC 23834] gi|224943283|gb|EEG24492.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC 23834] Length = 339 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 110/229 (48%), Gaps = 17/229 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + R++ +++ + + + RY + GGK++R L Sbjct: 23 FQQHLPRDLSRVNAVIERAVQSEVALISQIG--------RYIISAGGKRLRPVLTILSGK 74 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 75 VLGYDEDPLYALAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNMFGNAAAVLVGDFL 132 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 T AF+++ S + ++ +++ NI +G + Q+++I + I E + + + Sbjct: 133 YTRAFQLMVSSGS-----LKILDVMADATNIIAEGEVL-QLMNIGNTNITEAEYVQVIQY 186 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L A + GAI+A A+ ++ L+ +G ++G FQ+ DD+LD Sbjct: 187 KTAKLFEAAAQVGAILAGATPEQENALKDYGRHIGTAFQIIDDVLDYSG 235 >gi|167031589|ref|YP_001666820.1| polyprenyl synthetase [Pseudomonas putida GB-1] gi|166858077|gb|ABY96484.1| Polyprenyl synthetase [Pseudomonas putida GB-1] Length = 295 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 132/239 (55%), Gaps = 13/239 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 + R+DT L+ L + T+ +RL +A+RY+++ GGK++R L Sbjct: 4 TYQASCQARVDTALEPLFI-----APTKELERLYAAMRYSVMNGGKRVRPLLAYAACEAL 58 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + Sbjct: 59 GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118 Query: 126 YAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182 AF + P + DNIR ++ +L G GM+GGQ +D+ +D+ + + + Sbjct: 119 LAFSALLDPHLSPQADNIRLAMVQALAKAAGPAGMVGGQAIDLGSVGLKLDQQALEFMHR 178 Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 KTGAL+ + GA+ A A Q + + L+ + + +G+ FQ+ DD+LD E D L K+ Sbjct: 179 HKTGALIEASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237 >gi|296101542|ref|YP_003611688.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056001|gb|ADF60739.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 299 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 92/242 (38%), Positives = 135/242 (55%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 ++LQ R + L + Q N L+ A+ Y ALLGGK++R FLV Sbjct: 2 DFANELQARVIRANDALRRFIAP-----QPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F ++ T AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+ Sbjct: 57 NMFGISDTTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I+S P ++ D R ++ L G+ GM GGQ LD++ E ++ Q+ Sbjct: 117 LQTLAFSILSDAPMAEVSDRDRLAMVSELAMASGVAGMCGGQALDLEAEGRQVNLEQLER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGVQGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|227513485|ref|ZP_03943534.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577] gi|227524627|ref|ZP_03954676.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290] gi|227083358|gb|EEI18670.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577] gi|227088111|gb|EEI23423.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290] Length = 307 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 125/239 (52%), Gaps = 12/239 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L ++E + RI+ +L+ + Q +L ++ Y++ GGK++R L Sbjct: 4 MGTKLNEFIKEWTPRINQVLESKIEQ------DTDQQKLFESMSYSVNAGGKRLRPLLTI 57 Query: 60 ECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 FN + L+ A+E +H YSLIHDDLP+MDN +RRGKPT H Y A + Sbjct: 58 ATLITFNQAITDSILKATCALELLHSYSLIHDDLPAMDNDGLRRGKPTNHTIYGAGMATL 117 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 AG+GL AF+ + L + R QL L+L G +GM GQ DI+ E + + Sbjct: 118 AGDGLQALAFQWVVD--NDLTADTRCQLALALAKAAGPRGMASGQADDIEFEGTRLKLHE 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + + KTGAL+ +A +G IMA +++K+ L F N G FQ+ DD+LD D Sbjct: 176 LQKLDRNKTGALISYAVNAGLIMAQVPKDQKKDLLAFANNFGAAFQIYDDILDIVGDEK 234 >gi|289672640|ref|ZP_06493530.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae FF5] Length = 295 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ LD L + +RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|320546351|ref|ZP_08040668.1| geranyltranstransferase [Streptococcus equinus ATCC 9812] gi|320449005|gb|EFW89731.1| geranyltranstransferase [Streptococcus equinus ATCC 9812] Length = 289 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 117/212 (55%), Gaps = 12/212 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLP 93 + L+ AI Y++ GGK++R + E F V V AA+E IH SLIHDDLP Sbjct: 22 SPDLIEAILYSVDGGGKRVRPLIFLELLEGFGVALTDAHYDVAAALEMIHTGSLIHDDLP 81 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H +++E TAI+AG+ L ++++++ +L ++ L+ L H Sbjct: 82 AMDNDDYRRGRLTNHKKFNEATAILAGDSLFLDPYDLVANA--ELSAEVKVALIAELAHA 139 Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + +++ +I KTG L+ F + I+A + + LR Sbjct: 140 SGTYGMVGGQMLDMEGEERKLSLSELQLIHANKTGKLLTFPVVAAGIVAGLAGEDINNLR 199 Query: 212 CFGENLGIIFQLADDLLDCE------EDLPKK 237 G +G+ FQ+ DD+LD PKK Sbjct: 200 KAGSLIGLAFQVRDDILDVTASFEEIGKTPKK 231 >gi|319897071|ref|YP_004135266.1| geranyltranstransferase [Haemophilus influenzae F3031] gi|317432575|emb|CBY80935.1| geranyltranstransferase [Haemophilus influenzae F3031] Length = 296 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GHFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|330939927|gb|EGH43133.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B] Length = 295 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ LD L + +RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYQAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLTPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|268324511|emb|CBH38099.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured archaeon] Length = 343 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 15/237 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MNG + QE + + + +++ Q MQ N+ + A+ Y GGK++R L Sbjct: 1 MNGQ---QFQEEVQYFNCRMGEVIEQK---MQRCSNEIIHDALSYIRDTGGKRLRPILCL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A+ AIE +H SL+HDD+ +D+ Y+RR P+ Y E AI+ Sbjct: 55 LSAEAVGGSREKAMTTAIAIELLHNASLVHDDI--IDDNYVRRKSPSNPAMYGEKKAIVI 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + E+++ ++S + G L E E Sbjct: 113 GDFLFGISCEMLAKCGVPE-----VVGLVSSAVSDIAMGEYLEFSLRTLQE-TTEQSYME 166 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +KT + + E+GA++ S+ E R +G+N+GI FQ+ DD+LD D K Sbjct: 167 VATLKTASTFMASAEAGAMLGGGSEAEIANFRNYGKNVGIAFQIQDDILDICGDPAK 223 >gi|323340824|ref|ZP_08081076.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644] gi|323091947|gb|EFZ34567.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644] Length = 299 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 84/242 (34%), Positives = 126/242 (52%), Gaps = 15/242 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 N L + + ++ +D L Q + L ++ Y++ GGK+IR ++ Sbjct: 3 NSELDNFQAKFLPLLNERMDVYLQQLDTR------KTLHDSMSYSVDAGGKRIRPMIIML 56 Query: 61 CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 F L V A++E +H YSLIHDDLP+MDN +RRGK T H+ + E AI+A Sbjct: 57 VCDSFKKKIDQDVLDVCASLEFVHTYSLIHDDLPAMDNDELRRGKATNHVVFGESMAILA 116 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+GLLT AFE + T + + LM L G QGM+ GQ+ DI++E + Q+ Sbjct: 117 GDGLLTTAFECLGQ--TSISAKTKCTLMSRLAFAAGPQGMVNGQVGDIENEGVKLTLPQL 174 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234 + KTGAL+ +A ESG I+A S L+ G G+ FQ+ DD++D E++ Sbjct: 175 RNVHAQKTGALLRYAFESGGILAGVSDRALGELKELGNCFGLAFQIYDDIMDVVSTPEEM 234 Query: 235 PK 236 K Sbjct: 235 GK 236 >gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba Length = 268 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 29/227 (12%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S + + ++ LD S + + ++ A+RY+LL GGK++R L L Sbjct: 15 SYIIRKADSVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELV 67 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A+ A+E IH SLIHDD+ Y E A++AG+ LL+ Sbjct: 68 GGEESLAMPAACAVEMIHTMSLIHDDV------------------YGEDVAVLAGDALLS 109 Query: 126 YAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 +AFE ++S +++ + + L IG +G++ GQ++DI + + + I K Sbjct: 110 FAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISN--VGLEHLKFIHLHK 167 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 T AL+ + G I+ S E ERLR F +G++FQ+ DD+LD Sbjct: 168 TAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVT 214 >gi|227550446|ref|ZP_03980495.1| Geranyltranstransferase [Enterococcus faecium TX1330] gi|257888474|ref|ZP_05668127.1| polyprenyl synthetase [Enterococcus faecium 1,141,733] gi|257897151|ref|ZP_05676804.1| polyprenyl synthetase [Enterococcus faecium Com12] gi|293377376|ref|ZP_06623580.1| geranyltranstransferase [Enterococcus faecium PC4.1] gi|227180347|gb|EEI61319.1| Geranyltranstransferase [Enterococcus faecium TX1330] gi|257824528|gb|EEV51460.1| polyprenyl synthetase [Enterococcus faecium 1,141,733] gi|257833716|gb|EEV60137.1| polyprenyl synthetase [Enterococcus faecium Com12] gi|292644068|gb|EFF62174.1| geranyltranstransferase [Enterococcus faecium PC4.1] Length = 296 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 7/218 (3%) Query: 20 LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVG 76 L + + S + DR L A+ Y++ GGK+IR L+ + F+ +V Sbjct: 11 LPAVEKEILSFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVA 70 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS Sbjct: 71 AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMA-- 128 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 L + + L+ L G QGM+ GQ DI+ E + ++ I + KTG L+ +A Sbjct: 129 HLGHSPKLLLLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALL 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +G I+A + L+ E+LG+ FQ+ DDLLD Sbjct: 189 AGGILAKQPEEILLLLQRLAEHLGLAFQIRDDLLDVIG 226 >gi|163732321|ref|ZP_02139767.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149] gi|161394619|gb|EDQ18942.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149] Length = 333 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 114/234 (48%), Gaps = 16/234 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 + + L+ + ++T++ + M ++H R+ + + GGK++R L Sbjct: 12 DRMAAYLESDMAAVNTLIRE-------RMASKHAPRIPEVTAHLVDAGGKRLRPMLTLAT 64 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 65 AHLCGYDGPFHINLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGD 122 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L + +F+++ + +R +L+ +G + Q+ Q+ E + Sbjct: 123 YLFSRSFQLMVETGS-----LRVLDILANASATIAEGEVL-QLTASQNLATTEEIYLQVV 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KT AL A E G ++A A ++ L +G+ LG+ FQ+ DDLLD + D Sbjct: 177 RGKTAALFSAATEVGGVIAGAPDDQVAALFEYGDALGVAFQIVDDLLDFQGDAG 230 >gi|327402903|ref|YP_004343741.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823] gi|327318411|gb|AEA42903.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823] Length = 322 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 19/229 (8%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L++ ++ I+ + + L+ + +L +RY L LGGK++R L LF + Sbjct: 4 LEQYTRFIEEKIAGINLE-------EEPRKLYDPLRYFLSLGGKRMRPILTLISGELFQI 56 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ +L IE H +SLIHDD+ MD +RRGKPTVHI+++ AI++G+ L Sbjct: 57 SNEESLSAALTIELFHNFSLIHDDI--MDEAPVRRGKPTVHIKWNSSVAILSGDVLFVEG 114 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMK 184 ++ ++ + +L N + GQ LD+ E D E + ++K Sbjct: 115 YQQLAKYTD------KRLPILLKRFNETAIEVCQGQQLDMDFESRDDVTEEAYIEMIRLK 168 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T L+ A E GAI+ + S+ + L FG +LGI FQ+ DD+LD D Sbjct: 169 TSVLLGCALEFGAILGNQSEETRNHLYHFGVSLGIAFQIQDDILDLYGD 217 >gi|297599729|ref|NP_001047684.2| Os02g0668100 [Oryza sativa Japonica Group] gi|255671156|dbj|BAF09598.2| Os02g0668100 [Oryza sativa Japonica Group] Length = 349 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 11/221 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70 +++ D+ + + M + +R+ SA+RYA+L G K+ L L Sbjct: 55 SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 114 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 AL A+E +H SL+HDDLP D RRG+P+ H Y A++AG+ L A+ Sbjct: 115 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 174 Query: 131 ISSPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTG 186 + + + + +++ L +G GM GQ LD+ + E +V + K G Sbjct: 175 VIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 234 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + + GA++ A +E+ LR +G +G+++QL DD+ Sbjct: 235 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 275 >gi|149202965|ref|ZP_01879936.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. TM1035] gi|149143511|gb|EDM31547.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Roseovarius sp. TM1035] Length = 333 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 14/233 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L + L + ++ ++ + + + Q L+ A GGK++R LV A Sbjct: 12 EQLAAHLAAKMEAVNLLIRERMASRHAPRIPQVTAHLVEA------GGKRLRPMLVLATA 65 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 66 DLCGYDGPFDVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDY 123 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L AF+++ P + +R +LS +G + Q+ QD E + + Sbjct: 124 LFARAFQLMVEPGS-----LRVLDILSNASATIAEGEVL-QLSAAQDLATTEDIYLQVVR 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL A E G ++A A + + + L +G+ LGI FQ+ DDLLD + D Sbjct: 178 GKTAALFSAATEVGGVIAGAPETQIKALFEYGDALGIAFQIVDDLLDYQGDAK 230 >gi|157148758|ref|YP_001456077.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895] gi|157085963|gb|ABV15641.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895] Length = 498 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 120/241 (49%), Gaps = 15/241 (6%) Query: 3 GGLPSKLQENSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLV 58 G + N ++I+ + D+ A+ ++ ++D +L++ + Y ++ GGK+IR + Sbjct: 168 GAISPAFAMNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIA 227 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 A + + A IE IH +L+HDD+ +D +RRGK T + + +++ Sbjct: 228 VLAARAVGYQENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 285 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 G+ + T AF++++S + ++ ++S N+ +G + Q++++ D I E Sbjct: 286 VGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYM 339 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 + KT L A + ++A + +++ L+ +G LG FQL DDLLD D L Sbjct: 340 RVIYSKTARLFEAAAQCSGLLAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLG 399 Query: 236 K 236 K Sbjct: 400 K 400 >gi|224437990|ref|ZP_03658929.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818] gi|313144436|ref|ZP_07806629.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818] gi|313129467|gb|EFR47084.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818] Length = 289 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 85/226 (37%), Positives = 120/226 (53%), Gaps = 8/226 (3%) Query: 14 KRIDTILDDL---LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-H 69 + I IL D LL A + + H + GGK+ R LV + Sbjct: 2 QHITEILHDFESFLLAQAPQIPSFHQHYEKAVWEMVQNGGKRFRPALVFSVLNALAPQLV 61 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A +IECIH YSLIHDDLP MDN +RRG PT+H +Y E A++ G+GL TYAF Sbjct: 62 KNAFLPALSIECIHTYSLIHDDLPCMDNASLRRGHPTLHTKYGETLALLVGDGLNTYAFA 121 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187 +++ + L ++ L+ SL N G+ GM+ GQMLD + E + Q+ I KT Sbjct: 122 LLAQAR--LDSQLKLALIESLAINAGIGGMVLGQMLDCEFENQALALEQLQTIHTNKTAK 179 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ + E GAI+A+A ++ L FG LG+ FQL DD++D +D Sbjct: 180 LIATSLEFGAIIANADSKLRKALYDFGLKLGVYFQLRDDIIDICQD 225 >gi|296313619|ref|ZP_06863560.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC 43768] gi|296839857|gb|EFH23795.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC 43768] Length = 324 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 113/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ D++R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVD-----SDSMRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|330951508|gb|EGH51768.1| polyprenyl synthetase [Pseudomonas syringae Cit 7] Length = 295 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ LD L + +RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALDALFKAPGPEL-----ERLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAGLEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|294789125|ref|ZP_06754364.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453] gi|294482866|gb|EFG30554.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453] Length = 297 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 86/235 (36%), Positives = 129/235 (54%), Gaps = 6/235 (2%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 + + L++ +R ++LL+ A Q + L A+RY L GGK++R LV A Sbjct: 2 ITNNLKQWQQR-AQAQTEILLERALPSINQAPETLHEAMRYVTLGGGKRLRPLLVWAAAE 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + A+ECIH YSL+HDD+P+MDN +RRGKPT H+QYDE TA++ G+ L Sbjct: 61 LGDSVQAACEAAAVAVECIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEPTALLVGDAL 120 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181 T AF+++S+ T L + +++ L G GM GGQ +D+ + +D + Q+ + Sbjct: 121 QTLAFDVLSTA-TALSPARQIRMINVLAKASGSMGMAGGQAIDLANVGVDLSQIQLEQMH 179 Query: 182 KMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL+ A GA+ N L + LG+ FQ+ DD+LDCE D Sbjct: 180 GWKTGALIRAAVALGALSCPDLDDNALAALDNYATKLGLAFQVIDDVLDCEADTA 234 >gi|332829987|gb|EGK02615.1| hypothetical protein HMPREF9455_00865 [Dysgonomonas gadei ATCC BAA-286] Length = 326 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 15/236 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 ++++ D +LD + + L I Y L LGGK++R L +L+ Sbjct: 1 MKKSLYNFDEVLDIVNTRITQINYKNKPQSLFDPITYILSLGGKRVRPALALMSYNLYKE 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + + AIE H ++L+HDDL MD +RRGKPTVHI++++ TA+++G+ +L A Sbjct: 61 DVERVIPIALAIEVFHNFTLLHDDL--MDRADMRRGKPTVHIRWNDNTAVLSGDAMLIEA 118 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMK 184 ++ I+ ++ + + + GQ D++ E + + + ++K Sbjct: 119 YKEIAKTDSEQLPRVL------DLFSETATEICCGQQYDMEFEQRLDVTIPEYLEMIRLK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 T L+ A + GAI+A A + + L FG N+G+ FQL DDLLD D KK Sbjct: 173 TAVLLGCALKEGAIVAGAPDADADNLYEFGINVGLGFQLKDDLLDVYGDSESFGKK 228 >gi|116753785|ref|YP_842903.1| farnesyltranstransferase [Methanosaeta thermophila PT] gi|116665236|gb|ABK14263.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Methanosaeta thermophila PT] Length = 327 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 20/242 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 G L ++L+ + I +D+LL + L A R+ L GGK++R L+ Sbjct: 7 GDLEAELRRRADLISKAIDELL-------PVSRPEGLYDAARHLLGAGGKRLRPSLLLIA 59 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + AIE +H ++LIHDD+ MDN +RRGKP VH+ + AI+AG+ Sbjct: 60 GESVGCDAARLVPAAVAIELVHNFTLIHDDI--MDNASLRRGKPAVHVIWGTSGAILAGD 117 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178 L + AFE++S + + + ML+ T + GQ D + E + E + Sbjct: 118 TLYSKAFEMLSMVDAPPERVLAAMDMLARTCTS----ICEGQWQDLEFERAESVTEKEYL 173 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LP 235 + + KTG L + GA + A L FG G+ FQ+ DD+LD ED L Sbjct: 174 EMIEKKTGVLYGASAWIGATLGGAPPEVAGGLEEFGRLTGMGFQIHDDILDLTVPEDVLG 233 Query: 236 KK 237 K+ Sbjct: 234 KR 235 >gi|323529243|ref|YP_004231395.1| polyprenyl synthetase [Burkholderia sp. CCGE1001] gi|323386245|gb|ADX58335.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001] Length = 293 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 79/235 (33%), Positives = 119/235 (50%), Gaps = 11/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L+ L +T +L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLGRVEAALEHYLP-----AETIEPAKLHEAVRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 + AF ++S L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVALTSD--VLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTREQLETMH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ A R L + +G+ FQ+ DD+LD D Sbjct: 176 RMKTGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230 >gi|162147645|ref|YP_001602106.1| geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5] gi|209542274|ref|YP_002274503.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161786222|emb|CAP55804.1| Geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5] gi|209529951|gb|ACI49888.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 311 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 L S L + I+ +D LL R++ A+RYA L GGK++R +L E AS Sbjct: 20 LRSSLSNRATAIEAAIDSLLPPV-----PGAEGRVVDAMRYATLGGGKRLRGYLTAEVAS 74 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF V A RV A++E +H YSL+HDDLP+MDN +RRG+P+ H ++DE TAI+AG+ L Sbjct: 75 LFGVEPARAYRVAASVEMLHAYSLVHDDLPAMDNDDLRRGQPSTHRKFDEATAILAGDAL 134 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 T AFEI++ T IR L+ +L G GM+GGQM+D+ E + +V + Sbjct: 135 QTMAFEILTDTATHPSATIRIGLVAALAAASGAAGMVGGQMIDMDGEGRALSLPEVERLH 194 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 +KTG L+ +A E+GAI+ A + R+ +G +LG FQ+ADD+LD E+L K Sbjct: 195 ALKTGCLIRYAAEAGAILGDADLPARARIAAYGRDLGAAFQIADDVLDATASAEELGK 252 >gi|148825981|ref|YP_001290734.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittEE] gi|229846704|ref|ZP_04466811.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 7P49H1] gi|148716141|gb|ABQ98351.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae PittEE] gi|229810193|gb|EEP45912.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae 7P49H1] Length = 296 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV Sbjct: 2 GNFSEELQQVQIRINRFLEAQFDGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+ Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L ++AFEI++ + + L+ L G+QGM GQ LD+ E I +++ + Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175 Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233 >gi|262277469|ref|ZP_06055262.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha proteobacterium HIMB114] gi|262224572|gb|EEY75031.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha proteobacterium HIMB114] Length = 292 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 83/233 (35%), Positives = 136/233 (58%), Gaps = 10/233 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 +L+ + +++ L ++ ++RL A+ Y L GGK IRS+LV Sbjct: 2 SNFQQELKLTADKVNAFLKSYFKNQSA------DNRLYEAMEYGLFSGGKMIRSYLVQST 55 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +F+++ + + AA+EC+H YSLIHDDLPSMDN RRGK + H Y E TAI+AG+ Sbjct: 56 CKIFDIDEKKYIPIAAAVECVHSYSLIHDDLPSMDNDDFRRGKESTHKAYGEYTAILAGS 115 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179 LLT AFE+IS PK ++ ++I+++++ +L+ + G G+ GGQ D ++ +D+ + Sbjct: 116 SLLTLAFEMISDPKFEIDEDIKTKIIHALSSSSGHLGIAGGQFFDLSLKKSEVDKETIID 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q KTGALM F E +++H + + + G +G++FQ+ DD LD Sbjct: 176 MQNKKTGALMGFCTEVAPLLSH-KKELAKTFKDLGIKIGLLFQIVDDFLDKYG 227 >gi|189461913|ref|ZP_03010698.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136] gi|189431307|gb|EDV00292.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136] Length = 327 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 18/228 (7%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 +E K+I ++ L + L I Y L LGGK++R L+ +LF + Sbjct: 7 KELLKQIHAYIESL-------PYSHEPKGLYDPIEYVLGLGGKRLRPVLMLLAYNLFKED 59 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 AAIE H ++L+HDDL MD +RRGKPTVH ++DE TAI++G+ +L +F Sbjct: 60 VQAIFSQAAAIETYHNFTLLHDDL--MDKADMRRGKPTVHKKWDENTAILSGDAMLILSF 117 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKT 185 + + ++ + + S T + GQ D++ E ++ + + ++KT Sbjct: 118 QFMMQ-GCPVEYTHQVMDIFSRT----ALEVCDGQQWDMEFESREDVTVDEYMEMIRLKT 172 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ A + GA++ AS+ + + L FG +G+ FQL DD LD D Sbjct: 173 SVLLAGALKIGAVLGGASEKDAQLLYDFGIQIGLAFQLQDDYLDVYGD 220 >gi|83945403|ref|ZP_00957751.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633] gi|83851237|gb|EAP89094.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633] Length = 296 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 95/236 (40%), Positives = 146/236 (61%), Gaps = 9/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 + L E + R+ LD LL + R++SA+RYA LG GK++R FL+ E Sbjct: 2 SAFDTHLTETADRVTVALDALLARPDGP-----EARVISAMRYAALGPGKRLRPFLLIEA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + LR A+EC+H YSL+HDDLP MD+ +RRG+PTVH +YDE TA++AG+ Sbjct: 57 GFLVGADERALLRAACAVECVHAYSLVHDDLPCMDDDDLRRGRPTVHKEYDEATAVLAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VF 178 L + AFE+++ P+T +R++L+L L+ G +GM+GGQM+D+ E + + + Sbjct: 117 ALQSQAFELLADPETHSNPAVRAELVLRLSKASGPRGMVGGQMIDMAVEAGELSDIGIIT 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 Q+MKTGAL+ F E+G ++A+A + ++ L F +LG+ +Q+ DDLLD E D Sbjct: 177 RCQRMKTGALISFCAEAGGVIANADRAQRIALEGFAHDLGLCYQIVDDLLDAEGDE 232 >gi|78063059|ref|YP_372967.1| farnesyl-diphosphate synthase [Burkholderia sp. 383] gi|77970944|gb|ABB12323.1| farnesyl-diphosphate synthase [Burkholderia sp. 383] Length = 294 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 117/235 (49%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L +T ++L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----AETAVPEKLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVALTDAAA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSA 231 >gi|308174223|ref|YP_003920928.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7] gi|307607087|emb|CBI43458.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7] gi|328554168|gb|AEB24660.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208] gi|328912560|gb|AEB64156.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3] Length = 296 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 84/240 (35%), Positives = 134/240 (55%), Gaps = 10/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L + L + I+ L + + + L ++ Y+L GGK++R +V Sbjct: 1 MTNKLDAFLASRKQMIEQQL------SLYTERLDMPESLKKSMLYSLEAGGKRLRPLVVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++A Sbjct: 55 AVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLA 114 Query: 120 GNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176 G+GLLT +F++I+S ++ R +L+ L G +GM+GGQ D++ E + + Sbjct: 115 GDGLLTESFKLITSHVSEEVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKQVTLKE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I + KT L+ F+ +GAI+A A ++E E+LR F ++GI FQ+ DD+LD E K Sbjct: 175 LESIHERKTAKLLGFSVTAGAILADAPEDEIEKLRLFSSHIGIGFQIRDDILDIEGHEEK 234 >gi|307565038|ref|ZP_07627551.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A] gi|307346207|gb|EFN91531.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A] Length = 324 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 116/226 (51%), Gaps = 15/226 (6%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 +S +I +I+++ + A + L I+Y L LGGK+IR L+ +++ + Sbjct: 3 SSDKIFSIINNYIATLAY---DREPKSLYEPIKYVLSLGGKRIRPVLMLLAYNMYKDDPE 59 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + L +E H Y+L+HDDL MD+ +RRG TVH +++ TAI++G+ +L AFE Sbjct: 60 SILNQACGLETYHNYTLLHDDL--MDSAPLRRGHQTVHEKWNANTAILSGDTMLVLAFER 117 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGA 187 I+ L + + GQ LD++ E + E + + ++KT Sbjct: 118 ITRGNPSC------LKALLDLFTVTALEIGEGQQLDMEFEHRNDVTEAEYIEMIRLKTSV 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ A + GA++ +AS+ + L FGE +G+ FQL DD LD D Sbjct: 172 LLACALKMGAMLGNASEKDANNLYLFGEKIGLAFQLQDDYLDVYGD 217 >gi|222087742|ref|YP_002546279.1| geranyltranstransferase protein [Agrobacterium radiobacter K84] gi|221725190|gb|ACM28346.1| geranyltranstransferase protein [Agrobacterium radiobacter K84] Length = 304 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 116/236 (49%), Positives = 163/236 (69%), Gaps = 3/236 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 L++N+ +++ +L LL + + RLL A+R+ L GGK++R FLV E Sbjct: 6 SSFEHHLRDNAGKVEAVLSRLLADARLNDEIARPARLLEAMRHGVLNGGKRLRPFLVMET 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+L N ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVHI +D TAI+AG+ Sbjct: 66 AALLGGNADAALRIGAALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDYATAILAGD 125 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179 LLTYAF+II++P+T L + + +L+L+L+ G+ GM GGQ LD+ E + DE + Sbjct: 126 SLLTYAFDIIAAPETDLPADRKMELVLALSRAAGIGGMAGGQALDLAAEKVTPDEQGITT 185 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GAIMA AS +++RLR FGE +G+ FQLADDLLD D Sbjct: 186 LQAMKTGALIRFACEAGAIMAGASAGDRQRLRSFGEKIGLAFQLADDLLDLTADAA 241 >gi|206576602|ref|YP_002240111.1| geranyltranstransferase [Klebsiella pneumoniae 342] gi|288936860|ref|YP_003440919.1| polyprenyl synthetase [Klebsiella variicola At-22] gi|290510084|ref|ZP_06549454.1| geranyltranstransferase [Klebsiella sp. 1_1_55] gi|206565660|gb|ACI07436.1| geranyltranstransferase [Klebsiella pneumoniae 342] gi|288891569|gb|ADC59887.1| Polyprenyl synthetase [Klebsiella variicola At-22] gi|289776800|gb|EFD84798.1| geranyltranstransferase [Klebsiella sp. 1_1_55] Length = 299 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 93/242 (38%), Positives = 133/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +LQ ++ + L + Q N L+ A+ Y ALLGGK++R FLV Sbjct: 2 DFPQQLQACVEQANGALRRFIAP-----QPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F V+ T AA+ECIH YSL+HDDLP+MD+ +RRG PT HI++ E AI+AG+ Sbjct: 57 AMFGVSRTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I+S P + D R ++ L G+ GM GGQ LD++ E +D + Sbjct: 117 LQTLAFSILSDAPMADVSDRDRLAMVSELAQASGVAGMCGGQALDLEAEGQQVDLQALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + EN+G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRMGALSAGERGRAALPALDRYAENIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|15676243|ref|NP_273375.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58] gi|161870743|ref|YP_001599916.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442] gi|218768897|ref|YP_002343409.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491] gi|7225547|gb|AAF40771.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58] gi|121052905|emb|CAM09257.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491] gi|161596296|gb|ABX73956.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442] gi|254670157|emb|CBA05202.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha153] gi|316984329|gb|EFV63303.1| polyprenyl synthetase family protein [Neisseria meningitidis H44/76] gi|319411198|emb|CBY91603.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase; OPP synthetase) [Neisseria meningitidis WUE 2594] gi|325128912|gb|EGC51766.1| octaprenyl-diphosphate synthase [Neisseria meningitidis N1568] gi|325140975|gb|EGC63481.1| octaprenyl-diphosphate synthase [Neisseria meningitidis CU385] gi|325198983|gb|ADY94439.1| octaprenyl-diphosphate synthase [Neisseria meningitidis G2136] gi|325199520|gb|ADY94975.1| octaprenyl-diphosphate synthase [Neisseria meningitidis H44/76] Length = 324 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 112/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS + L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|16126308|ref|NP_420872.1| geranyltranstransferase [Caulobacter crescentus CB15] gi|221235087|ref|YP_002517523.1| dimethylallyltransferase/geranyltranstransferase [Caulobacter crescentus NA1000] gi|13423548|gb|AAK24040.1| geranyltranstransferase [Caulobacter crescentus CB15] gi|220964259|gb|ACL95615.1| dimethylallyltransferase/Geranyltranstransferase [Caulobacter crescentus NA1000] Length = 294 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 98/234 (41%), Positives = 142/234 (60%), Gaps = 6/234 (2%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 L ++ + + + LD+LL + RL A+RYA LG GK++R F E Sbjct: 2 SDLAKRIVQAADIVTVALDELLPRADGP-----ESRLTEAMRYAALGPGKRLRPFFALET 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +F++ LR A+ECIH YSL+HDDLP+MD+ +RRG+PTVH QYDE TAI+AG+ Sbjct: 57 GKMFDLPERPVLRAACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHKQYDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L T AFEI++ P T ++RS+L+ L G +GM GGQM+D+ D V +Q Sbjct: 117 ALQTAAFEIMAHPDTHDDGHVRSELVRKLAIASGARGMCGGQMIDLLGVRDDLGAVARMQ 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++KTGAL+ FA E I+A A ++E+ L F ++LG+ +Q+ DD+LD E D Sbjct: 177 RLKTGALIAFAFEIPLIIARAKESERSALMAFAQDLGLAYQIVDDILDAEGDEE 230 >gi|167627431|ref|YP_001677931.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597432|gb|ABZ87430.1| geranyltranstransferase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 293 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 123/222 (55%), Gaps = 8/222 (3%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 ++ + A + +L A++Y+ GGK+IR+ V FN++ ++ AIE Sbjct: 11 NIFSEKAFSEIQSPSKKLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCHKIAFAIE 70 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 CIH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L + FEII++ Sbjct: 71 CIHTYSLIHDDLPAMDNDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINTLDINDIY 130 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 ++ ++ GL+GM+GGQ +D +++ + + ++ KT + + I Sbjct: 131 KLKKVNIV-FAKCCGLEGMVGGQQLDIDGENQNLKLQDLEILHINKTAKMFRASIVLPYI 189 Query: 199 MAHASQNEKE-RLRCFGENLGIIFQLADDLLDC---EEDLPK 236 ++ + +E E L + +G+ FQ+ DD+LD ++L K Sbjct: 190 VSKYNNDEFETILTKVSDLIGLCFQIKDDILDVTRSTQELGK 231 >gi|329895161|ref|ZP_08270845.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088] gi|328922475|gb|EGG29816.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088] Length = 298 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 87/241 (36%), Positives = 127/241 (52%), Gaps = 16/241 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 + L R++ L L Q + +L A+ Y+L +GGK++R LV A+ Sbjct: 2 IEQHLNACKARVEACLVAQLNQL-----PRSEVQLADAVAYSLKVGGKRLRPALVYSAAA 56 Query: 64 -------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 LF N AAIE IH YSL+HDDLP+MDN +RRG+PTVH QYDE TA Sbjct: 57 SLRADLTLFPPNLTPLDLAAAAIESIHTYSLVHDDLPAMDNDDLRRGQPTVHRQYDEATA 116 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-- 174 I+ G+ L +AFE+++ T D + + ++ L G +GM+ GQ LD+Q E Sbjct: 117 ILVGDALQAWAFELLTQIDTLPADKVVA-MVKELAQASGPKGMVLGQALDMQATGASESV 175 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + + +KTGAL+ A GA +A E+ L +G+ +G+ FQ+ DD+LD D Sbjct: 176 DYLKQLHSLKTGALIRSALRLGAYCMNAGSKERRVLSAYGDAIGLCFQVVDDILDVTTDS 235 Query: 235 P 235 Sbjct: 236 A 236 >gi|134095950|ref|YP_001101025.1| octaprenyl diphosphate synthase [Herminiimonas arsenicoxydans] gi|133739853|emb|CAL62904.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Herminiimonas arsenicoxydans] Length = 329 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 18/235 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + +D ++ L + + Q D ++SA GGK+IR LV A+ Sbjct: 13 LIQPIAADMSAVDAVIRQKLHSEVA-LVNQIADYIISA------GGKRIRPVLVLLMANA 65 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 66 LGYRGTHQYDLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDFLH 123 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + AF+++ + NIR+ +L+ N+ +G + Q+L++ D I E + + + K Sbjct: 124 SRAFQMMVTVG-----NIRAMQILADATNVIAEGEVL-QLLNMHDPDISEERYTQVIRSK 177 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 T L A + GA++A AS++E E +G +LG FQL DD+LD D+ K Sbjct: 178 TAKLFEAAAQLGALIAGASEDEIEAAAEYGRSLGTAFQLIDDVLDYSGHAEDIGK 232 >gi|86130739|ref|ZP_01049338.1| polyprenyl synthetase [Dokdonia donghaensis MED134] gi|85818150|gb|EAQ39310.1| polyprenyl synthetase [Dokdonia donghaensis MED134] Length = 324 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 12/215 (5%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L H + L I Y L LGGK++R L LF ++ AL A+E Sbjct: 11 FLEYLNKHALEKEPKNLYEPINYILQLGGKRLRPVLTLMACELFEKDYKDALDAALAVEI 70 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 H +SL+HDD+ MD+ +RRG+ TVH ++D T I++G+ +L A+++ + + Sbjct: 71 FHNFSLVHDDI--MDDAPLRRGEETVHEKWDINTGILSGDAMLIRAYQLFENYEGATFKE 128 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAI 198 L+ + + GQ D+ E D+ + + + KT L+ A + GAI Sbjct: 129 ------LAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYMKMIEYKTAVLVGAALKMGAI 182 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +A AS++ +E + +G +LG+ FQL DD LD D Sbjct: 183 VAGASKSCQEGIYNYGRDLGLAFQLQDDYLDAFGD 217 >gi|330899928|gb|EGH31347.1| polyprenyl synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 281 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ LD L + +RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|261391852|emb|CAX49311.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase; OPP synthetase) [Neisseria meningitidis 8013] Length = 324 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 112/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDEKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS + L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str. 2250] gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 295 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ L+ L + + +RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|212693605|ref|ZP_03301733.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855] gi|237708764|ref|ZP_04539245.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237724205|ref|ZP_04554686.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265755969|ref|ZP_06090436.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212663858|gb|EEB24432.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855] gi|229437393|gb|EEO47470.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229457190|gb|EEO62911.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263234047|gb|EEZ19648.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 325 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 70/220 (31%), Positives = 112/220 (50%), Gaps = 12/220 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 + +LD + A+ + L + I Y L LGGK+IR L+ L+ N L Sbjct: 6 EQLLDKVNTYLATMPYMREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILSQ 65 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A IE H Y+L+HDDL MD +RR KPTVH +DE TAI++G+ +L A+ ++ Sbjct: 66 AAGIETYHNYTLLHDDL--MDRADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLM---- 119 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFA 192 D+ Q+M + + GQ D++ E + ++ + ++KT L+ A Sbjct: 120 NNCPDSYLKQVMDIFSQTA--LEICEGQQWDMEFETRSDVTVSEYIEMIRLKTSVLLSAA 177 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + GA++ AS+ + ++L FG +G+ FQL DD LD Sbjct: 178 LKIGAVLGDASEEDAQKLYDFGIKMGLAFQLQDDFLDVYG 217 >gi|258542579|ref|YP_003188012.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256633657|dbj|BAH99632.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256636716|dbj|BAI02685.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-03] gi|256639769|dbj|BAI05731.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-07] gi|256642825|dbj|BAI08780.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-22] gi|256645880|dbj|BAI11828.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-26] gi|256648933|dbj|BAI14874.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-32] gi|256651920|dbj|BAI17854.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654977|dbj|BAI20904.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-12] Length = 312 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 98/238 (41%), Positives = 149/238 (62%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 L + ++ I+ +D LL + T + RL+ A+RYA L GGK++R +L AS Sbjct: 21 LKQDMGARARVIEHTIDTLLP-----LTTGGDARLIEAMRYATLGGGKRLRGYLAIVTAS 75 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF V + RV A++E +H YSL+HDDLP+MD+ +RRG+P+ H Q+DE TAI+AG+ L Sbjct: 76 LFGVPESQSARVAASVEMLHAYSLVHDDLPAMDDDDMRRGQPSTHRQFDEATAILAGDAL 135 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 T AFEI+++ +T N+R L+ + G GM+GGQM+D++ E + +V + Sbjct: 136 QTKAFEILAASQTHTDANVRIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLEEVRHLH 195 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 +KTG L+ ++ ESGAI+ AS + + RLR +G N+G FQ+ADD+LD E+L K Sbjct: 196 ALKTGCLIRYSAESGAILGQASPDLRRRLRSYGANIGAAFQIADDVLDATATAEELGK 253 >gi|229579956|ref|YP_002838355.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14] gi|228010671|gb|ACP46433.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14] Length = 331 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 14/238 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M+ L S + ++ + + + ++ ++ GGK++R ++ Sbjct: 1 MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG Sbjct: 54 SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + L AFE ++ L + + ++I + + GQ +D+ E + E + Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEY 169 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + K KT L + G I+ AS + + L +G NLGI FQ+ DD+L D Sbjct: 170 VQMIKGKTAMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDEK 227 >gi|89889496|ref|ZP_01201007.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7] gi|89517769|gb|EAS20425.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7] Length = 327 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 15/222 (6%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L S + Q L + Y L LGGK++R L A ++ A+ A+E Sbjct: 11 FLEALNSRVTAQEPASLYDPVHYILQLGGKRLRPILTLMSAQMYGGKIDKAMDAAIAVEV 70 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 H ++L+HDD+ MD+ +RRGK TVH+++D T I++G+ +L A+++ +S + Sbjct: 71 FHNFTLLHDDI--MDDADLRRGKETVHVKWDVNTGILSGDAMLIMAYQLFNSYDPETF-- 126 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAI 198 L+ + + GQ D+ E D+ ++ + K+KT L+ A + GAI Sbjct: 127 ----YWLNQVFSKTALEVCEGQQYDVDFETRDDVTISEYINMIKLKTSVLVGCALQMGAI 182 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 +A ++ E++ + +G N+G+ FQL DD LD D K+ Sbjct: 183 IAGVNKKEQQLIYDYGINIGLAFQLMDDYLDAFGDPATFGKE 224 >gi|329115335|ref|ZP_08244089.1| Geranyltranstransferase [Acetobacter pomorum DM001] gi|326695314|gb|EGE47001.1| Geranyltranstransferase [Acetobacter pomorum DM001] Length = 312 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 98/238 (41%), Positives = 149/238 (62%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 L + ++ I+ +D LL + T + RL+ A+RYA L GGK++R +L AS Sbjct: 21 LKQDMGARARVIEHTIDTLLP-----LTTGGDARLIEAMRYATLGGGKRLRGYLAIVTAS 75 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF V + RV A++E +H YSL+HDDLP+MD+ +RRG+P+ H ++DE TAI+AG+ L Sbjct: 76 LFGVPESQSARVAASVEMLHAYSLVHDDLPAMDDDDMRRGQPSTHRKFDEATAILAGDAL 135 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 T AFEI+++ +T N+R L+ + G GM+GGQM+D++ E + +V + Sbjct: 136 QTKAFEILAASQTHADANVRIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLAEVRHLH 195 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 +KTG L+ ++ ESGAI+ AS N + RLR +G N+G FQ+ADD+LD E+L K Sbjct: 196 ALKTGCLIRYSAESGAILGQASPNLRRRLRSYGANIGAAFQIADDVLDATATAEELGK 253 >gi|261378523|ref|ZP_05983096.1| geranyltranstransferase [Neisseria cinerea ATCC 14685] gi|269145073|gb|EEZ71491.1| geranyltranstransferase [Neisseria cinerea ATCC 14685] Length = 298 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 130/238 (54%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKTWQQRAQAQTELLLERFLPS-----EGEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L H + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178 + L T AF++++ P + L + + ++ L G GM GGQ +D+ + + + +T + Sbjct: 119 DALQTQAFDVLARP-SSLPASRQLAMLSVLAKAGGSSGMAGGQAIDLANVGKQMAQTDLE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + S+N L + LG+ FQ+ DD+LDCE D Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSENSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|329116734|ref|ZP_08245451.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020] gi|326907139|gb|EGE54053.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020] Length = 289 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 81/233 (34%), Positives = 123/233 (52%), Gaps = 14/233 (6%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68 E +I+ + ++ Q L+ +I Y++ GGK+IR + E FN+ Sbjct: 2 EKLTKINQTISHFYQKSNLVSQD-----LIDSIIYSVDSGGKRIRPLFLLESLEAFNITL 56 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 +V AA+E +H SLIHDDLP+MDN RRG+ T H Q+DE TAI+AG+ L F Sbjct: 57 TEDHFKVAAALEMVHTGSLIHDDLPAMDNDEYRRGRLTNHKQFDEATAILAGDSLFIDPF 116 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTG 186 +I+ T ++ L+ L++ G GM+GGQMLD++ D+ + ++ I KTG Sbjct: 117 SLIAE--TNFLPQVKVDLIAQLSNAAGTFGMVGGQMLDMRAEDQKLGIEELQGIHSHKTG 174 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 L+ + + AI+A + L GE +G FQ+ DD+LD EDL K Sbjct: 175 KLLAYPFMAAAIIAQLPADMISDLTRAGELIGHAFQVRDDILDITAKFEDLGK 227 >gi|325981722|ref|YP_004294124.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212] gi|325531241|gb|ADZ25962.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212] Length = 322 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 19/230 (8%) Query: 18 TILDDLLLQTASHMQTQHNDRLLS-------AIRYAL-LGGKKIRSFLVTECASLFNVNH 69 + + Q S + ++L S Y + GGK++R LV A F + Sbjct: 4 EYIRSFIAQDMSIVDNVIREKLHSHVLLIRQVSEYIINSGGKRLRPALVILSAGAFGYSG 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + A IE IH +L+HDD+ +D +RR + T + + +++ G+ L + AF+ Sbjct: 64 KFHYNLAAVIEFIHTATLLHDDV--VDESELRRNRETANALFGNAASVLVGDFLYSRAFQ 121 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++ DN+R +L+ N +G + Q+L+ +D + E + + KT L Sbjct: 122 MMVE-----VDNMRVMQVLADATNTIAEGEVL-QLLNCRDPQVSEENYLQVIRFKTAKLF 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 A GAI+ +A+ E+ + +G +LG FQL DD+LD D+ K Sbjct: 176 EAASRLGAILGNATSEEENAMAVYGMHLGTAFQLVDDMLDYSGNNHDIGK 225 >gi|304386506|ref|ZP_07368794.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091] gi|304339335|gb|EFM05407.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091] Length = 324 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 111/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVDSGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS + L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|261365500|ref|ZP_05978383.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996] gi|288566037|gb|EFC87597.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996] Length = 324 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 112/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ R++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLSRVNEVINKAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKS 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDGDKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVDSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEAQYVQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ +A ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGNAPPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|30249867|ref|NP_841937.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] gi|30180904|emb|CAD85826.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718] Length = 322 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 13/218 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 D ++Q H Q ++ I ++ GGK++R LV A LF+ L + A +E Sbjct: 18 DNVIQQKLHSQVALVRQVSEYIIHS--GGKRLRPALVILAAGLFDYKGLHHHNLAAVVEF 75 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH +L+HDD+ +D +RR + T + + +++ G+ L + AF+++ N Sbjct: 76 IHTATLLHDDV--VDESELRRNQATANALFGNAASVLVGDFLYSRAFQMMVEVG-----N 128 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +R +L+ N +G + Q+L+ +D ++E + + KT L A GAI+ Sbjct: 129 MRVMEVLADATNTIAEGEVL-QLLNCRDPDVEEENYLQVIRFKTAKLFEAAARLGAILGG 187 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 A+ E+E L +G +LG FQL DDLLD D K Sbjct: 188 ATPAEEEALAAYGMHLGTAFQLVDDLLDYSGNDQDTGK 225 >gi|291086510|ref|ZP_06571551.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220] gi|291067630|gb|EFE05739.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220] Length = 498 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 118/232 (50%), Gaps = 15/232 (6%) Query: 12 NSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + D+ A+ ++ ++D +L++ + Y ++ GGK+IR + A Sbjct: 177 NLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 236 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 237 QENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 294 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 295 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 348 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 L A + I+A S +++ L+ +G LG FQL DDLLD D L K Sbjct: 349 LFEAAAQCSGILAGCSAEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGK 400 >gi|302343358|ref|YP_003807887.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075] gi|301639971|gb|ADK85293.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075] Length = 297 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 123/240 (51%), Gaps = 11/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M+ L L + + +D L+ L + +L A+RY+L GGK++R L Sbjct: 1 MSVDLKQYLAQRRQMVDAALEAWLP------ADESGGVILKAMRYSLFAGGKRLRPILCL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A+ A+E IH YSLIHDDLP+MD+ RRG PT H + + A++A Sbjct: 55 AGAEAVGGDPRRAMFCACALEMIHTYSLIHDDLPAMDDDDYRRGVPTNHKVFGQGMAVLA 114 Query: 120 GNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DET 175 G+GLLT A +++ L Q + G GM+GGQ D+ E + D Sbjct: 115 GDGLLTQAMVLLTDAAAVGDLPAERARQAANVVMRAAGHLGMVGGQAADLLAETMEPDLA 174 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 V I KTGAL+C + E+G I+A A ++ RL +G +G+ FQ+ADDLLD E D Sbjct: 175 MVDYIHARKTGALICASLEAGGILAGADRDRLSRLVRYGRRIGLAFQIADDLLDLEGDAE 234 >gi|227831075|ref|YP_002832855.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15] gi|229581383|ref|YP_002839782.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51] gi|238620509|ref|YP_002915335.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4] gi|284998571|ref|YP_003420339.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5] gi|227457523|gb|ACP36210.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15] gi|228012099|gb|ACP47860.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51] gi|238381579|gb|ACR42667.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4] gi|284446467|gb|ADB87969.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5] Length = 331 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 14/238 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M+ L S + ++ + + + ++ ++ GGK++R ++ Sbjct: 1 MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG Sbjct: 54 SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + L AFE ++ L + + ++I + + GQ +D+ E + E + Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEY 169 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + K KT L + G I+ AS + + L +G NLGI FQ+ DD+L D Sbjct: 170 VQMIKGKTAMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDEK 227 >gi|260429621|ref|ZP_05783598.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45] gi|260420244|gb|EEX13497.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45] Length = 333 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 14/231 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L L E+ ++ ++ + + + + L+ A GGK++R L A Sbjct: 12 DRLAELLSEDMGGVNALIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLASA 65 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 66 RLCGYEGPYHVHLAATVEFIHTATLLHDDV--VDESSQRRGRPTANLLWDNKSSVLVGDY 123 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L +F+++ P N+R +LS +G + Q+ QD E + + Sbjct: 124 LFARSFQLMVEPG-----NLRVLNILSNAAATIAEGEVL-QLTAAQDLKTTEDIYLQVVR 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT AL A E G ++A + + + L +G+ LGI FQ+ADDLLD + D Sbjct: 178 GKTAALFSAATEVGGVIAGVPEEQVQALFTYGDALGIAFQIADDLLDYQGD 228 >gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298484883|ref|ZP_07002982.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 295 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ L+ L + + +RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|330959939|gb|EGH60199.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 295 Score = 201 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ L+ L + + RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPEL-----TRLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLAALQVYARAIGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|288928474|ref|ZP_06422321.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108] gi|288331308|gb|EFC69892.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108] Length = 324 Score = 201 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 12/223 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D IL + + + L IRY L +GGK+IR L +LF + + L Sbjct: 5 DLILSKINAYLEALPFNRKPQSLYEPIRYVLSIGGKRIRPALALLAYNLFKDDPESILAP 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 +E H Y+L+HDDL MDN +RRGKPTVH ++D TAI++G+ +L A+++++ Sbjct: 65 ACGLETYHNYTLLHDDL--MDNAALRRGKPTVHKRWDANTAILSGDSMLVLAYQLVAQC- 121 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 D + + ++ L L + GQ D+ E + E + + ++KT L+ A Sbjct: 122 ----DAAKLKPVMELFTETAL-EIGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACA 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GA++A A Q + + L FGE +G+ FQL DD LD D Sbjct: 177 MKMGALLADAPQRDADLLYKFGEQIGLAFQLQDDFLDVYGDSK 219 >gi|239637669|ref|ZP_04678641.1| geranyltranstransferase [Staphylococcus warneri L37603] gi|239596887|gb|EEQ79412.1| geranyltranstransferase [Staphylococcus warneri L37603] Length = 292 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 86/230 (37%), Positives = 131/230 (56%), Gaps = 8/230 (3%) Query: 15 RIDTILDDLLLQTASHMQTQH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 +++ +++++ + N L ++ Y+L GGK+IR L+ + N ++ Sbjct: 4 QMNDLINEINDALKKSIPESTLNTNLEESMLYSLNAGGKRIRPVLLLLTLDMLNEDYRQG 63 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ LLT AFE++S Sbjct: 64 MQSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVS 123 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 + L D + +++ L + G GM+GGQ LD+Q E ID + + I + KTGAL+ Sbjct: 124 -YDSALCDAKKVKVLQRLAYASGHLGMVGGQTLDMQSEDKKIDISTLESIHRTKTGALLT 182 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 FA S +A ++ L F ++LG++FQ+ DDLLD D L KK Sbjct: 183 FAIMSAVDIADTDEHTSAMLNEFSDHLGLMFQIKDDLLDIYGDEQKLGKK 232 >gi|66043872|ref|YP_233713.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a] gi|63254579|gb|AAY35675.1| Polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a] gi|330971592|gb|EGH71658.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 295 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ LD L + +RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYQAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|294084635|ref|YP_003551393.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664208|gb|ADE39309.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum IMCC1322] Length = 302 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 98/240 (40%), Positives = 138/240 (57%), Gaps = 15/240 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 ++L ++ + +LD + + Q+ RL+ A+RYA+L GGK++R+ LV A Sbjct: 3 DFTAQLATDADQCADMLDMIF-----NAQSMQAPRLVDAMRYAVLNGGKRMRAGLVLGAA 57 Query: 63 SLFNVNHLT-------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115 L ALRV AA+EC+H YSLIHDDLP+MD+ RRGK + HI YDE T Sbjct: 58 RLAATESDASTYIDSRALRVAAALECLHAYSLIHDDLPAMDDADTRRGKSSCHIAYDEAT 117 Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FID 173 AI+AG+ L T AFEI++ T +R L+ +L GL GM GGQMLD+Q E + Sbjct: 118 AILAGDALQTLAFEILADDATHPDPAVRVALVTTLARASGLAGMAGGQMLDLQAETRTLT 177 Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + +Q MKTGAL+ A GA++ AS + + + LG+ FQ+ADDLLD + D Sbjct: 178 LAETEQMQMMKTGALIVCAASCGALVGEASSTLVNAIVAYADKLGLAFQIADDLLDYDGD 237 >gi|311748420|ref|ZP_07722205.1| polyprenyl synthetase [Algoriphagus sp. PR1] gi|126576932|gb|EAZ81180.1| polyprenyl synthetase [Algoriphagus sp. PR1] Length = 328 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 72/223 (32%), Positives = 109/223 (48%), Gaps = 12/223 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD L + + + L I Y L +GGK+IR L ++ N L Sbjct: 9 ALLDKLEVFIQNQNFGESPKELYEPINYILNIGGKRIRPLLSLLAYGMYAENPGKILSQA 68 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 +AIE H ++L+HDD+ MD +RRG TVH ++D AI++G+ +L A++++ + Sbjct: 69 SAIEVFHNFTLMHDDI--MDQAPLRRGNATVHEKWDANIAILSGDVMLVKAYDLLMETEP 126 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 L I N + GQ D+ E ++E + ++KT L+ A Sbjct: 127 ALLPEI------IRLFNKTAADVCEGQQFDMNFENQDHVNEKDYLNMIRLKTAVLLGCAL 180 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + GAI+ AS +E RL FG N+GI FQL DDLLD D K Sbjct: 181 KMGAILGGASSDEAHRLYEFGVNVGIGFQLKDDLLDVFADQEK 223 >gi|325203440|gb|ADY98893.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240355] Length = 324 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 112/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS + L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|325276613|ref|ZP_08142352.1| polyprenyl synthetase [Pseudomonas sp. TJI-51] gi|324098253|gb|EGB96360.1| polyprenyl synthetase [Pseudomonas sp. TJI-51] Length = 295 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 132/239 (55%), Gaps = 13/239 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S +R+D L+ L + T+ +RL +A+RY+++ GGK++R L Sbjct: 4 SYQASCQRRVDAALEPLFV-----APTKELERLYAAMRYSVMNGGKRVRPLLAYAACEAL 58 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + Sbjct: 59 GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118 Query: 126 YAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182 AF + P + D++R ++ +L G GM+GGQ +D+ +D+ + + + Sbjct: 119 LAFSALLDPHLSPQADSVRLAMVQALATAAGPAGMVGGQAIDLGSVGLKLDQRALAFMHR 178 Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 KTGAL+ + GA+ A A Q + + L+ + + +G+ FQ+ DD+LD E D L K+ Sbjct: 179 HKTGALIEASVRLGALASARAGQQQLDALQTYAQAIGLAFQVQDDILDVEGDTATLGKR 237 >gi|298369461|ref|ZP_06980778.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str. F0314] gi|298282018|gb|EFI23506.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str. F0314] Length = 324 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 114/231 (49%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + ++ + +Q ++SA GGK++R + Sbjct: 8 FKQHLHEDLDKVNVVINQAV-KSDVALISQIGTYIISA------GGKRLRPIITILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + + ++ +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVASGS-----MKILEVMADATNIIAEGEVM-QLMNIGNTDITEKQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ A+ +++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGGANPAQEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|325286587|ref|YP_004262377.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489] gi|324322041|gb|ADY29506.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489] Length = 324 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 13/225 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 ID + L + + L I Y L LGGK++R L A +F + A+ Sbjct: 4 IDQYRESFLEELNKITTEKEPKNLYEPINYILQLGGKRLRPILALMTADVFETDFKKAIP 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +L A+ ++ Sbjct: 64 AAMAVEVFHNFSLVHDDI--MDDAPLRRGKATVHEKWDINTGILSGDAMLIEAYRLLEQY 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCF 191 + + + + GQ D+ E D+ + + + KT L+ Sbjct: 122 DGEQYKKLNVLF------STTALQVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVAA 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + GAI+A + ++ + FG+NLGI FQL DD LD D PK Sbjct: 176 AMKMGAIIAETTVENEDLIYDFGKNLGIAFQLQDDYLDAFGD-PK 219 >gi|317132180|ref|YP_004091494.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3] gi|315470159|gb|ADU26763.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3] Length = 296 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 73/232 (31%), Positives = 115/232 (49%), Gaps = 10/232 (4%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASL 64 ++++ +KR++ L+ L RL A+RY A+ GGK++R LV E + Sbjct: 4 SERIEDIAKRVNEALNRFLPTAEGP-----QKRLFEAMRYSAMAGGKRVRPMLVLEFCRM 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 AL A+E IH YSLIHDDLP MD+ RRG+P+ H+QYDE TA++AG+ LL Sbjct: 59 CGGKEEQALPFACAVEMIHTYSLIHDDLPCMDDDDFRRGRPSCHVQYDEATALLAGDALL 118 Query: 125 TYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + AFE ++ +R+ +L+ L + + I + + Sbjct: 119 SLAFETGLCNNMQSGVLAQNALRAMGLLAKASGGQGMVGGQMIDLLSEGQHIPLELLETM 178 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGA++ A G I+A A + + + LG+ FQ+ DD+LD Sbjct: 179 HRGKTGAMIRAAAAGGCILAGADETRVQAADAYAAKLGLAFQIVDDILDVTG 230 >gi|295096799|emb|CBK85889.1| farnesyl-diphosphate synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 299 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 92/242 (38%), Positives = 133/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 + LQ R + L + Q N L+ A+ Y ALLGGK++R FLV Sbjct: 2 DFSNALQARVIRANDALRRFI-----EPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F ++ T AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+ Sbjct: 57 NMFGISDNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I+S P ++ D R ++ L G+ GM GGQ LD++ E + Q+ Sbjct: 117 LQTLAFSILSDAPMVEVSDRDRLAMVSELAMASGVAGMCGGQALDLEAEGRQVTLEQLER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGERGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|104779861|ref|YP_606359.1| geranyltranstransferase [Pseudomonas entomophila L48] gi|95108848|emb|CAK13544.1| geranyltranstransferase [Pseudomonas entomophila L48] Length = 295 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 82/241 (34%), Positives = 132/241 (54%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + Q R+D L+ L + + +RL +A+RY+++ GGK++R L Sbjct: 2 IAQYQQSAQARVDAALEPLFQAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + P+ + D IR Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFSALLDPRLSPQADGIRLQMVQALAKAAGPAGMVGGQAIDLGSVGVKLDQQALEYM 176 Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ A A Q + + L+ + + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASARAEQAQLDALQVYAQAIGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|307943552|ref|ZP_07658896.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp. TrichSKD4] gi|307773182|gb|EFO32399.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp. TrichSKD4] Length = 310 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 106/233 (45%), Positives = 153/233 (65%), Gaps = 3/233 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 L ++L + +++ LD++L T + +RLL+A+R+ AL GGK+IR L+ E Sbjct: 12 SDLKTRLTTQAAKVEARLDEMLAATPLENEVARPERLLAAMRHGALNGGKRIRPVLLLET 71 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 LF+ + AL + A+E IHCYSL+HDDLP+MD+ +RRG+PTVHI YDE TAI+AG+ Sbjct: 72 VRLFDQDDTQALDIACALEFIHCYSLVHDDLPAMDDDDLRRGQPTVHIAYDEATAILAGD 131 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179 LLT AF+++++P I+ +L+ L GL GM GGQMLD++ E D E ++ Sbjct: 132 ALLTLAFDVVANPGLHQDARIQLRLVRELAQAAGLGGMAGGQMLDLESEHRDRSEAEIRK 191 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q MKTGAL+ F C GAI ++A + + ER+ FGE +G+ FQLADDLLD E Sbjct: 192 LQSMKTGALLRFGCRGGAIFSNAREEDVERVTHFGEIIGLAFQLADDLLDVEA 244 >gi|170747046|ref|YP_001753306.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] gi|170653568|gb|ACB22623.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831] Length = 323 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 98/237 (41%), Positives = 142/237 (59%), Gaps = 7/237 (2%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61 +L E + ++T L + L + RL+ A+R+A+LGG K++R FL E Sbjct: 21 ADFTHRLTEVAGTVETFLVERLGPAVGPGEIARPPRLMEAMRHAVLGGGKRLRPFLAIET 80 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A + + AL GA +E +HCYSL+HDDLP+MD+ +RRGKPTVH YDE TAI+ G+ Sbjct: 81 ARMLGGSEAAALAAGAGVELVHCYSLVHDDLPAMDDDDMRRGKPTVHKAYDEATAILVGD 140 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDET 175 L T AFEI++ P Q +R+ L+L L GL GM+GGQ+LD+ E +D Sbjct: 141 ALQTLAFEIVADPAWQPDARVRADLVLGLARASGLGGMVGGQLLDLTAEGRFGAANMDVD 200 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q MKTGA++ F+ E+GAI+ A ++++ L +G LG FQ+ADD+LD E Sbjct: 201 DTLRMQAMKTGAILAFSVEAGAIVGGADKDQRAALLRYGLALGQAFQIADDILDREA 257 >gi|82702937|ref|YP_412503.1| farnesyltranstransferase [Nitrosospira multiformis ATCC 25196] gi|82411002|gb|ABB75111.1| Farnesyltranstransferase [Nitrosospira multiformis ATCC 25196] Length = 322 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 16/224 (7%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAI-------RYAL-LGGKKIRSFLVTECASLFNVNH 69 + L+ + T ++L S + Y + GGK++R LV A F Sbjct: 4 ERIRSLIAPDMGRVDTVIREKLHSEVVLIRQVSEYIINSGGKRLRPALVILSAGAFGYTG 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + A +E IH +L+HDD+ +D +RR K T + + +++ G+ L + AF+ Sbjct: 64 QYHYNLAAIVEFIHTATLLHDDV--VDASELRRSKATANALFGNAASVLVGDFLYSRAFQ 121 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++ DN+R +L+ N +G + Q+L+++D +DE + + KT L Sbjct: 122 MMVE-----VDNMRVMRVLADATNTIAEGEVL-QLLNVRDPDVDEENYLRVIRYKTAKLF 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A GAI+ +AS E+E + +G +LG FQL DD+LD D Sbjct: 176 EAATRLGAILGNASPAEEEAMAVYGMHLGTAFQLTDDMLDYSGD 219 >gi|313496894|gb|ADR58260.1| IspA [Pseudomonas putida BIRD-1] Length = 295 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 79/233 (33%), Positives = 128/233 (54%), Gaps = 13/233 (5%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71 R+D L+ L + + + +RL +A+RY+++ GGK++R L Sbjct: 10 QARVDAALEPLFIAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQ 64 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AF + Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSAL 124 Query: 132 SSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGAL 188 P + D+IR ++ L G GM+GGQ +D + +D+ + + + KTGAL Sbjct: 125 LDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGAL 184 Query: 189 MCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + + GA+ A A + + L+ + + +G+ FQ+ DD+LD E D L K+ Sbjct: 185 IEASVRLGALASARAEPAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237 >gi|215485502|ref|YP_002327933.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69] gi|312964557|ref|ZP_07778813.1| geranyltranstransferase [Escherichia coli 2362-75] gi|215263574|emb|CAS07904.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69] gi|312290791|gb|EFR18668.1| geranyltranstransferase [Escherichia coli 2362-75] gi|315299587|gb|EFU58835.1| polyprenyl synthetase [Escherichia coli MS 16-3] gi|323191339|gb|EFZ76602.1| geranyltranstransferase [Escherichia coli RN587/1] Length = 299 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|88859185|ref|ZP_01133826.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas tunicata D2] gi|88819411|gb|EAR29225.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas tunicata D2] Length = 296 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 104/230 (45%), Positives = 140/230 (60%), Gaps = 10/230 (4%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69 EN R++ +LD LL Q + LL+A RY+LL GGK++R +V +F N Sbjct: 9 ENQLRVEGVLDTLLTQ-----PMITDQTLLAASRYSLLNGGKRMRPCMVYVTGEIFGANP 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 V AAIECIH YSL+HDDLP+MD+ +RRG PT HI YDE TAI+AG+ L T+AFE Sbjct: 64 DDLDLVAAAIECIHSYSLVHDDLPAMDDDDLRRGMPTCHIAYDEATAILAGDALQTFAFE 123 Query: 130 IISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTG 186 I+SS K + + L+ +L GL+GM GGQ LDI + I+ TQ+ I ++KTG Sbjct: 124 ILSSSKFKTINAQQQVALIANLASASGLRGMCGGQALDIAATNCAINLTQLEQIHQLKTG 183 Query: 187 ALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 AL+ A GAI A + + L+ FGEN+G+ FQ+ DD+LD E D Sbjct: 184 ALLTSAILMGAICAPKTTPEILQNLKIFGENIGLAFQVQDDILDIEGDTA 233 >gi|325132994|gb|EGC55670.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M6190] gi|325136902|gb|EGC59499.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M0579] gi|325138982|gb|EGC61531.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ES14902] Length = 324 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 112/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ D++R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVD-----SDSMRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS + L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|294635305|ref|ZP_06713803.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685] gi|291091314|gb|EFE23875.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685] Length = 301 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 90/239 (37%), Positives = 127/239 (53%), Gaps = 10/239 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 +L+ +R D L L Q + L+ A+RY ALLGGK++R +LV Sbjct: 2 ATFEQQLKAYRQRADAALSQALDN-----QPFGDGPLVGAMRYGALLGGKRLRPYLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 LF + AAIECIH YSL+HDDLP+MD+ +RRG+PT HI++ E AI+AG+ Sbjct: 57 GRLFGCDLSALDAPAAAIECIHAYSLLHDDLPAMDDDDLRRGQPTCHIKFGEAHAILAGD 116 Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L T AF +++ SP + D R ++ L H G+ GM GGQ LD+ E +D + Sbjct: 117 ALQTLAFTLLTDSPMPGVADRDRLCMLSELAHASGVAGMCGGQALDLAAEGQRVDLAALE 176 Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTGAL+ A GA+ A L + +G+ FQ+ DD+LD D K Sbjct: 177 QIHRHKTGALIRCAVRLGALAGGNAGHAALTLLDRYANAIGLAFQVQDDILDVVGDSSK 235 >gi|229916250|ref|YP_002884896.1| polyprenyl synthetase [Exiguobacterium sp. AT1b] gi|229467679|gb|ACQ69451.1| Polyprenyl synthetase [Exiguobacterium sp. AT1b] Length = 292 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 86/236 (36%), Positives = 135/236 (57%), Gaps = 15/236 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L + + ++ + +L+ ++ RL A+ Y+L GGK+IR LV + + Sbjct: 7 LNKWKRAVELAMQELID------SSEMPKRLRDAMAYSLEAGGKRIRPALVYAVLETYGM 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + V A++E +H YSLIHDDLP+MD+ +RRG+PT H Q+DE TAI+AG+ LLT A Sbjct: 61 SLERGREVAASLEMVHTYSLIHDDLPAMDDDDLRRGRPTNHRQFDEATAILAGDALLTDA 120 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMK 184 F I++ D +++ G GM+GGQ+ D+ E + ++ I + K Sbjct: 121 FRILTQMPLSALD--IVEIIRIFGLAAGSSGMVGGQLDDMLAEKRNDVTLEELQSIHERK 178 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TGAL+ +A E+GAI+A AS ++ L+ FG +LGI FQ+ DD+LD D + K+ Sbjct: 179 TGALLVYALEAGAILAGASVEDRMHLKQFGRHLGIAFQIQDDILDVVGDEETIGKR 234 >gi|148545812|ref|YP_001265914.1| polyprenyl synthetase [Pseudomonas putida F1] gi|148509870|gb|ABQ76730.1| farnesyl-diphosphate synthase [Pseudomonas putida F1] Length = 295 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 130/239 (54%), Gaps = 13/239 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 + R+D L+ L + + +Q RL +A+RY+++ GGK++R L Sbjct: 4 TYQASCQARVDAALEPLFIAPSKELQ-----RLYAAMRYSVMNGGKRVRPLLAYAACEAL 58 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + Sbjct: 59 GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118 Query: 126 YAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQK 182 AF + P + D+IR ++ L G GM+GGQ +D + +D+ + + + Sbjct: 119 LAFSALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHR 178 Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 KTGAL+ + GA+ A A Q + + L+ + + +G+ FQ+ DD+LD E D L K+ Sbjct: 179 HKTGALIEASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237 >gi|323475387|gb|ADX85993.1| farnesyltranstransferase [Sulfolobus islandicus REY15A] Length = 331 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 14/238 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M L S + ++ + + + ++ ++ GGK++R ++ Sbjct: 1 MTDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG Sbjct: 54 SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + L AFE ++ L + + ++I + + GQ +D+ E + E + Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEY 169 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + K KT L + G I+ AS + + L +G NLGI FQ+ DD+L D Sbjct: 170 VQMIKGKTAMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDILGIIGDEK 227 >gi|307720223|ref|YP_003891363.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM 16294] gi|306978316|gb|ADN08351.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM 16294] Length = 283 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 10/222 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTA 72 + + L D L T+ + + L + + GGK+ R L+ +N +A Sbjct: 2 QNFEQFLLDNLP-TSKSIHPTYESALQNMLE---AGGKRFRPALLLGVVKAYNPLMLESA 57 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 A+E +H YSLIHDDLP+MD+ +RRGKPT+H+ +DEVTAI+ G+ L TY+FE+++ Sbjct: 58 RHAALAVEFLHTYSLIHDDLPAMDDSPLRRGKPTLHVSFDEVTAILVGDALNTYSFEVLA 117 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMC 190 + D R +L+ L N GL GM+ GQ +D E + + KT L+ Sbjct: 118 NA--PFSDETRVKLIRELASNGGLNGMVLGQAIDCYFENKPLAVEDIKTLHTNKTAKLIA 175 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + GA++ ++L FG LG++FQ+ DD+LD + Sbjct: 176 ASLKMGALIVGRDDA-ADKLYDFGIKLGLLFQIQDDILDVTQ 216 >gi|295700827|ref|YP_003608720.1| polyprenyl synthetase [Burkholderia sp. CCGE1002] gi|295440040|gb|ADG19209.1| Polyprenyl synthetase [Burkholderia sp. CCGE1002] Length = 293 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 120/235 (51%), Gaps = 11/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 + +R++T L+ L +T +L A+RYA+LGG K++R L Sbjct: 3 FEQWTRSVLERVETALEHYLP-----AETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGARAERLDAAAAALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 + AF +++S L ++ L+ L G GM GGQ +D+ + ++ + Sbjct: 118 QSQAFVVLTSD--VLGQPQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRPRLETMH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ + L + +G+ FQ+ DD+LD D Sbjct: 176 RMKTGALLRAAVRMGALAGETPDAQALASLDAYAAAVGLAFQVVDDILDVTTDSA 230 >gi|330686046|gb|EGG97669.1| geranyltranstransferase [Staphylococcus epidermidis VCU121] Length = 288 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 86/229 (37%), Positives = 128/229 (55%), Gaps = 12/229 (5%) Query: 20 LDDLLLQTASHMQTQHNDR-----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 ++DL+ + ++ + L ++ Y+L GGK+IR L+ + N ++ + Sbjct: 1 MNDLINEINDALKKSIPESTLNTNLEESMLYSLNAGGKRIRPVLLLLTLDMLNEDYRQGM 60 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ LL AFE++S Sbjct: 61 QSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLPKAFELVS- 119 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 + L D + +++ L G GM+GGQ LD+Q E ID + + I + KTGAL+ F Sbjct: 120 YDSALSDTKKVKVIQRLAFASGHLGMVGGQTLDMQSEDKAIDISTLESIHRTKTGALLTF 179 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 A S +A ++ L F ++LG++FQ+ DDLLD D L KK Sbjct: 180 AIMSAVDIADTDEHTSAMLNEFSDHLGLMFQIKDDLLDIYGDEQKLGKK 228 >gi|255066032|ref|ZP_05317887.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256] gi|255049577|gb|EET45041.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256] Length = 324 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 114/231 (49%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ R++ +++ + Q+ + +Q ++SA GGK++R + A Sbjct: 8 FQRHLPEDLSRVNEVINQAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAAKS 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDGDKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVDSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEAQYVQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ +A+ ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGNAAPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|125540612|gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indica Group] Length = 344 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 11/221 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70 +++ D+ + + M + +R+ SA+RYA+L G K+ L L Sbjct: 50 SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 109 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 AL A+E +H SL+HDDLP D RRG+P+ H Y A++AG+ L A+ Sbjct: 110 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 169 Query: 131 ISSPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTG 186 + + + + +++ L +G GM GQ LD+ + E +V + K G Sbjct: 170 VIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 229 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + + GA++ A +E+ LR +G +G+++QL DD+ Sbjct: 230 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 270 >gi|50252136|dbj|BAD28132.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica Group] gi|215713481|dbj|BAG94618.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740753|dbj|BAG97409.1| unnamed protein product [Oryza sativa Japonica Group] gi|215767016|dbj|BAG99244.1| unnamed protein product [Oryza sativa Japonica Group] Length = 342 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 11/221 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70 +++ D+ + + M + +R+ SA+RYA+L G K+ L L Sbjct: 48 SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 107 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 AL A+E +H SL+HDDLP D RRG+P+ H Y A++AG+ L A+ Sbjct: 108 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 167 Query: 131 ISSPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTG 186 + + + + +++ L +G GM GQ LD+ + E +V + K G Sbjct: 168 VIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 227 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + + GA++ A +E+ LR +G +G+++QL DD+ Sbjct: 228 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 268 >gi|188590181|ref|YP_001921548.1| geranyltranstransferase [Clostridium botulinum E3 str. Alaska E43] gi|188500462|gb|ACD53598.1| putative geranyltranstransferase [Clostridium botulinum E3 str. Alaska E43] Length = 289 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 78/227 (34%), Positives = 124/227 (54%), Gaps = 12/227 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 ID L + S +N + + Y++ +GGK+IR L+ SL+ N + Sbjct: 10 IDEYLKKYFINRNS-----YNKTVYESAGYSVNIGGKRIRPTLLILTYSLYKDNIEKIMP 64 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + AAIE IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+ LL A ++ Sbjct: 65 IAAAIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKS 124 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L ++ ++ G +GM+GGQ++D+ E I + ++ + + KTG L+ + Sbjct: 125 SLELGESALKAS-YEISKAAGPEGMIGGQVVDVLSEVREISKEELEYMHEKKTGELIRVS 183 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 +G I+A+ + E L +G+ LG+ FQ+ DD+LD EE L K Sbjct: 184 IVAGGILANVPSGDIEALNEYGKKLGLAFQIKDDILDVIGTEETLGK 230 >gi|83854856|ref|ZP_00948386.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1] gi|83842699|gb|EAP81866.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1] Length = 332 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 16/232 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 + + L + ++ ++ D M ++H R+ + + GGK++R L Sbjct: 11 DRMAAYLNADMTAVNDLIRD-------RMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAA 63 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 64 ARLCGYDGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L +F++++ +N+R +L+ +G + Q+ Q+ DE + Sbjct: 122 YLFARSFQLMTET-----NNMRVLAILANASATIAEGEVL-QLTAAQNLATDEGIYLQVV 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT AL A + G ++A A + + L +G+ LGI FQ+ DDLLD + D Sbjct: 176 RGKTAALFSAATQVGGVIAAAPDAQVQALFDYGDALGIAFQIVDDLLDYQGD 227 >gi|330813965|ref|YP_004358204.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487060|gb|AEA81465.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 338 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 17/232 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 L S Q + +D+ + + L + H + + Y + GGK++R L Sbjct: 18 EELRSAYQSEIEEVDSFIKEKL--------SSHVELIGEMSSYLIQSGGKRLRPLLTIAS 69 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + LF +++ A +E IH +L+HDD+ +D RRGK T + + +I+ G+ Sbjct: 70 SELFGYQGDRHIKLAACVELIHNATLLHDDV--IDKSDFRRGKKTNNNLWGNKNSILTGD 127 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 LL FEI+ + + +LS + QG + + + E + E I Sbjct: 128 YLLGRCFEIMVEDGS-----LEVLKLLSSVSSEIAQGEILQLQHEKEVETL-EKTYLEII 181 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT +L + G + S+NEKE L FG NLGI FQ+ DD+LD D Sbjct: 182 GSKTSSLFAASMRVGGCINDKSKNEKEALTSFGFNLGICFQITDDILDYYSD 233 >gi|110680572|ref|YP_683579.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114] gi|109456688|gb|ABG32893.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114] Length = 333 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 110/233 (47%), Gaps = 14/233 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 + + L+ + + T++ + + + + L+ A GGK++R L A Sbjct: 12 DRMAAYLESDMAAVSTLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPMLTLAAA 65 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 66 HLCGYDGPFHINLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDY 123 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L + +F+++ + +R +L+ +G + Q+ Q+ E + + Sbjct: 124 LFSRSFQLMVETGS-----LRVLDILANASATIAEGEVL-QLTASQNLATTEEVYLQVVR 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL A E G ++A A + L +G+ LGI FQ+ DDLLD + D Sbjct: 178 GKTAALFSAATEVGGVIAGAPDDHVAALFEYGDALGIAFQIVDDLLDFQGDAG 230 >gi|332519159|ref|ZP_08395626.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4] gi|332045007|gb|EGI81200.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4] Length = 324 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 12/214 (5%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L + + + L I Y L LGGK++R L A +FN ++ AL +IE Sbjct: 11 FLEYLETFSKIREPKNLYQPIDYILKLGGKRLRPVLTLMTAEVFNYDYKKALDAALSIEV 70 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 H +SL+HDD+ MD+ +RRG+ TVH ++D TAI++G+ +L A+++ + + Sbjct: 71 FHNFSLVHDDI--MDDAPLRRGEQTVHEKWDVNTAILSGDAMLIMAYQLFENYDS----- 123 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAI 198 ++ L+ + + GQ D+ E D+ ++ + + KT L+ A + GAI Sbjct: 124 -KTFQALAKLFSKTALEVCEGQQYDVDFETRDDVTISEYLKMIEYKTAVLVGAAMKMGAI 182 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +A AS +++ + FG LGI FQL DD LD Sbjct: 183 VAKASNEDQDGIYNFGRLLGIAFQLQDDYLDAFG 216 >gi|256847381|ref|ZP_05552827.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256716045|gb|EEU31020.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 287 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 78/228 (34%), Positives = 120/228 (52%), Gaps = 12/228 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + + K+I+ L D + + L ++ Y+L+ GGK++R L F Sbjct: 2 IHDYQKQINQYLSDHVENECAE------PTLATSTIYSLMAGGKRLRPALTLAICDAFQQ 55 Query: 68 N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + LR A+E +H YSLIHDDLP+MDN +RRG PT H ++ A +AG+GLLT Sbjct: 56 SINQDVLRASCAVELLHTYSLIHDDLPAMDNDDLRRGLPTNHRRFGAGMATLAGDGLLTL 115 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMK 184 AF+ +S L R L+ L G GM+ GQ +DI +E + + ++ + K Sbjct: 116 AFQWLSD--NNLATTTRLSLVRELATAAGPAGMVAGQAMDIHNEGHHLALPDLQLLHEKK 173 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 TGAL+ +A +G I+ + + K L FGE G+ FQ+ DDL+D Sbjct: 174 TGALIRYAVLAGGIITNQAPETKHLLARFGEYYGLAFQIYDDLMDVVG 221 >gi|255037310|ref|YP_003087931.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053] gi|254950066|gb|ACT94766.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053] Length = 324 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 12/223 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 ++L+ L + H L I Y + LGGK+ R L AS+F+ + A++ Sbjct: 6 SLLEKLQTEFDRHSYGDAPVELYEPISYIMSLGGKRFRPLLTLLAASIFDTDIDKAIKPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E H ++L+HDD+ MD +RRG PTVH ++D TAI++G+ +L A++++ Sbjct: 66 MAVEVFHNFTLMHDDI--MDRAPLRRGMPTVHEKWDANTAILSGDVMLIRAYDLLLDIPK 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 + ++ ++ + + GQ LD+ E + E + + ++KT L+ FA Sbjct: 124 EQLRSVLARFNRTAAE------VCEGQQLDMNFEKRWDVTEAEYIGMIRLKTSVLLGFAL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 E G I+A A + L GEN+GI FQL DDLLD D K Sbjct: 178 ELGGIIAGADDETVQLLYSAGENMGIGFQLKDDLLDVYGDPAK 220 >gi|83941379|ref|ZP_00953841.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36] gi|83847199|gb|EAP85074.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36] Length = 332 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 16/232 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 + + L + ++ ++ D M ++H R+ + + GGK++R L Sbjct: 11 DRMAAYLNADMTAVNDLIRD-------RMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAA 63 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 64 ARLCGYDGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L +F++++ +N+R +L+ +G + Q+ Q+ DE + Sbjct: 122 YLFARSFQLMTET-----NNMRVLAILANASATIAEGEVL-QLTAAQNLATDEGIYLQVV 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT AL A + G ++A A + + L +G+ LGI FQ+ DDLLD + D Sbjct: 176 RGKTAALFSAATQVGGVIATAPDAQVQALYDYGDALGIAFQIVDDLLDYQGD 227 >gi|323478112|gb|ADX83350.1| Farnesyltranstransferase [Sulfolobus islandicus HVE10/4] Length = 331 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 14/238 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M+ L S + ++ + + + ++ ++ GGK++R ++ Sbjct: 1 MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG Sbjct: 54 SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + L AFE ++ L + + ++I + + GQ +D+ E + E + Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEY 169 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + K KT L + G I+ AS + + L +G NLGI FQ+ DD+L D Sbjct: 170 VQMIKGKTAMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDILGIIGDEK 227 >gi|224588345|gb|ACN58969.1| octaprenyl diphosphate synthase [uncultured bacterium BLR10] Length = 348 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 115/230 (50%), Gaps = 15/230 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 + + + ++T++ L S + Q + ++SA GGK+IR LV A+ Sbjct: 31 NIAHTIAADMDAVNTVIRRKLHSEVS-LVNQIAEYIISA------GGKRIRPVLVLLVAN 83 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 ++ + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 84 AYSYKGTAHHELAAVVEFIHTATLLHDDV--VDESSLRRGRATANALFGNAASVLVGDFL 141 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + AF+++ +N+R +LS N+ +G + Q+L++ D + + + + + Sbjct: 142 YSRAFQMMVGL-----NNMRVMQILSDATNVIAEGEVL-QLLNMHDPDVSQERYLQVIRS 195 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT L A E GA+++ A+ + E +G +LG FQL DD+LD D Sbjct: 196 KTAKLFEAAAELGALVSGANDAQIEAAGEYGRSLGTAFQLIDDVLDYAGD 245 >gi|163745677|ref|ZP_02153037.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45] gi|161382495|gb|EDQ06904.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45] Length = 334 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 113/233 (48%), Gaps = 14/233 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 + + L ++ + + ++ + + + + L+ A GGK++R L A Sbjct: 13 DQMAAYLADDMQAVSALIRERMASKHAPRIPEVTAHLVEA------GGKRLRPMLTLAAA 66 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 67 RMCGYGGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNQSSVLVGDY 124 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L +F++++ P + + +LS +G + Q+ Q+ DE + + Sbjct: 125 LFARSFQLMTEPGS-----MPVMRILSNAAATIAEGEVL-QLTAAQNLATDEAVYLQVVR 178 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL A E G ++A AS ++ + L +G+ LGI FQ+ DDLLD + D Sbjct: 179 GKTAALFSAATEVGGVIAGASTDQVKALYDYGDALGIAFQIVDDLLDYQGDTG 231 >gi|163753596|ref|ZP_02160719.1| putative isoprenyl synthetase [Kordia algicida OT-1] gi|161325810|gb|EDP97136.1| putative isoprenyl synthetase [Kordia algicida OT-1] Length = 324 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 12/223 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 I D + + L I Y L LGGK++R L A +F + AL Sbjct: 3 HIAHYRDTFISYLEEKVTVSEPKNLYEPIIYILQLGGKRLRPVLTLMTAEIFGASPQKAL 62 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +L A+++ + Sbjct: 63 DAALAVEVFHNFSLVHDDI--MDDAPLRRGKETVHEKWDINTGILSGDAMLILAYQLFEN 120 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190 K ++ L+ + + GQ DI E ++ + + + KT L+ Sbjct: 121 YKG------KTFRALAELFSKTAIEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLVG 174 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GA++A AS+ + + + FG LG+ FQL DD LD D Sbjct: 175 AAMKMGALVAEASEKDAQGIYDFGRYLGLAFQLQDDYLDAYGD 217 >gi|332307431|ref|YP_004435282.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174760|gb|AEE24014.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 296 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 89/232 (38%), Positives = 128/232 (55%), Gaps = 6/232 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 KR+ +D LL S + +H RL A++YALL GGK++R FLV V Sbjct: 3 FDTQQKRVHQRVDALLQAQISDLD-EHAPRLKKAMQYALLMGGKRMRPFLVYAVGEALGV 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AIECIH YSL+HDDLP+MD+ +RRG PT HIQ+DE AI+AG+ L T A Sbjct: 62 SESDLDAPALAIECIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTLA 121 Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 F+I+ + P + + R +L+ L+ G GM GGQ +D+Q I + Q+ + K Sbjct: 122 FDIVVNYPLSDFANQQRIELVRILSRASGYDGMCGGQGIDLQSTNTLISQRQLEQLHSKK 181 Query: 185 TGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 TGAL+ A + A ++ S K L + + +G+ FQ+ DD+LD D Sbjct: 182 TGALIIAAVKMAATLSTSVSDESKALLSQYAKTIGLAFQVQDDILDVVGDSK 233 >gi|254464181|ref|ZP_05077592.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I] gi|206685089|gb|EDZ45571.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I] Length = 328 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 59/232 (25%), Positives = 115/232 (49%), Gaps = 16/232 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + L + + ++ ++ + M ++H R+ + + GGK++R L A Sbjct: 9 LAATLSQELEAVNVLI-------RTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 61 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L Sbjct: 62 MCGYEGDHHVKLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYL 119 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 +F+++ ++ +R +L+ +G + QM + DE + + Sbjct: 120 FARSFQLMVETES-----LRVLDILANASATIAEGEVL-QMTAASNLKTDEGIYLQVVRG 173 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL A E G ++A A + + + L +G+ LGI FQ+ADDLLD + D Sbjct: 174 KTAALFSAATEVGGVIAGAPETQVKALFEYGDALGIAFQIADDLLDYQGDSK 225 >gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB] gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB] Length = 297 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 10/232 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 + R ++ L L RL A+RYA L GGK++R L Sbjct: 6 FAEWMAVTQDRAESALGRFLP-----GPDCIPARLHEAMRYATLGGGKRVRPLLAHAAGE 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L VG A+E IH YSL+HDDLP MD+ +RRG+PT H+++DE TA++ G+ L Sbjct: 61 LTGATPEALDIVGCAVEMIHAYSLVHDDLPCMDDDVLRRGRPTCHVEFDEPTALLVGDSL 120 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 T AFE+++S + + +++ L H G +GM GGQ +D+ + + ++ ++ Sbjct: 121 QTMAFELLASQPLG-EPKQQLEIIALLAHASGSRGMAGGQAIDLASVGKPLTQPELELMH 179 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTGAL+ A GA+ S +E+ L F + G++FQ+ DD+LDC Sbjct: 180 ALKTGALIRAAVLLGALAGQPLSADERTSLDRFAKRAGLLFQVVDDILDCTA 231 >gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM 12885] gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM 12885] Length = 308 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 109/218 (50%), Gaps = 8/218 (3%) Query: 26 QTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNH---LTALRVGAAIEC 81 + R+ A+RY AL GGK +R LV A R AA+E Sbjct: 28 EEVLPGPDVPPARIHEAMRYSALAGGKLLRPVLVMAAARCVGGPEAVTPAVRRAAAAVEL 87 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKD 140 +H YSLIHDDLP+MD+ +RRG+P H+ + E AI+AG+ LLT AFE+++ P+ Sbjct: 88 VHTYSLIHDDLPAMDDDAMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADP 147 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGA 197 + + L G G++GGQ+ D +Q +D ++ I + KTGAL GA Sbjct: 148 AVALAVAEELARAAGTAGLIGGQVDDLDAVQGAPLDLARLQSIHRRKTGALFRACVRMGA 207 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +A A + E E L + G FQ+ DD+LD D Sbjct: 208 RLAGAGEGELEALTAYATAFGEAFQIVDDILDVTGDEA 245 >gi|88193100|pdb|2FOR|A Chain A, Crystal Structure Of The Shigella Flexneri Farnesyl Pyrophosphate Synthase Complex With An Isopentenyl Pyrophosphate gi|88193101|pdb|2FOR|B Chain B, Crystal Structure Of The Shigella Flexneri Farnesyl Pyrophosphate Synthase Complex With An Isopentenyl Pyrophosphate Length = 323 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 26 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 80 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 81 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 140 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 141 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 200 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 201 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 260 Query: 236 KK 237 K+ Sbjct: 261 KR 262 >gi|160871987|ref|ZP_02062119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Rickettsiella grylli] gi|159120786|gb|EDP46124.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Rickettsiella grylli] Length = 294 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 113/223 (50%), Gaps = 12/223 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 RI+ +L L + L A+ YA+L GGK++R V ++ ++ Sbjct: 8 YQNRINGLLKQCLSN-----PPPLSKPLYDAMIYAVLNGGKRLRPLYVYTLGNVLGLSLQ 62 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + AIE IH YSLIHDDLP MDN RRGKP+ H Q+ E A++AG+ L AF+ Sbjct: 63 DLDHIACAIEFIHAYSLIHDDLPCMDNDDWRRGKPSCHKQFGEAMALLAGDALQALAFDT 122 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTG 186 + K + +++ LT +G QGM+ GQ +D +D D + I +KTG Sbjct: 123 L--LKAPFQSLKVIKMLSVLTEAVGAQGMVAGQAMDFKDFNALGRSDRSNAENIHALKTG 180 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +L A + AI A Q+ L+ G +G++FQ+ DD+ D Sbjct: 181 SLFGAAFQLPAIAADLPQDHSLTLKNVGHQVGLVFQIQDDICD 223 >gi|260583700|ref|ZP_05851448.1| geranyltranstransferase [Granulicatella elegans ATCC 700633] gi|260158326|gb|EEW93394.1| geranyltranstransferase [Granulicatella elegans ATCC 700633] Length = 294 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 91/239 (38%), Positives = 122/239 (51%), Gaps = 14/239 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M+ + QE + T +D++ + RL A+ YA GGK+IR LV Sbjct: 1 MSEMISYWQQEIENYLLTRIDEI---------PNISTRLKEAMLYACSSGGKRIRPLLVL 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + L V L V A++E IH YSLIHDDLP MDN RRGK TVH Q+DE TAI+A Sbjct: 52 LISHLEEVELQKVLPVAASLEMIHTYSLIHDDLPGMDNDDYRRGKLTVHKQFDEATAILA 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLT FE ++ QL D + + + L G GM+ GQM DI E I Q+ Sbjct: 112 GDALLTLTFEELAQC--QLSDAKKVRAIQVLGSASGASGMITGQMRDIASEHQEITLEQL 169 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I KTG L+ A G ++ + +E L FG + G+ FQ+ +DL D D K Sbjct: 170 KQIHADKTGQLLLAAIRLGLLVLEDATPYEEALLKFGVHFGLAFQIQNDLQDVCWDSEK 228 >gi|315223793|ref|ZP_07865642.1| polyprenyl synthetase [Capnocytophaga ochracea F0287] gi|314946239|gb|EFS98239.1| polyprenyl synthetase [Capnocytophaga ochracea F0287] Length = 321 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 14/228 (6%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 I+ L + L I+Y L LGGK+IR L ++F ++ AL Sbjct: 4 IEEYKTAFLQHIEKIFTPKEPIHLYEPIQYILNLGGKRIRPILTLIATNIFGKDYRKALN 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 AIE H +SLIHDD+ MDN +RRGKPTVH ++D I++G+ +L A++++ Sbjct: 64 AATAIEVFHNFSLIHDDI--MDNASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDC 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF 191 +++ L T + + GQ +D+ E + E + KT L+ Sbjct: 122 PSKIFQE------LVKTLSETALKVCEGQQMDMDFEKLQEVSIEAYMQMISYKTSVLIGA 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237 A + G+I++ ++ + + FG NLGI FQL DD LD D KK Sbjct: 176 ALQMGSIISETTKENQINMYNFGLNLGIAFQLQDDYLDTFGDASFGKK 223 >gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor] gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor] Length = 371 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 77/249 (30%), Positives = 128/249 (51%), Gaps = 21/249 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + E + ++ LD A+ + L A+RYALL GGK++R L Sbjct: 69 FDFKAYMGERAVAVNRALD------AAIPAGEPPAALHDAMRYALLAGGKRVRPALCLAA 122 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 ++ A+ AA+E +H SL+HDDLP MD+ +RRGKPT H+ Y E A++AG+ Sbjct: 123 CAVVGGPEAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGD 182 Query: 122 GLLTYAFEIISSPKTQLKD-------NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174 LL+ +F ++S + D + + L IG +G++ GQ++D++ E Sbjct: 183 ALLSLSFHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSE 242 Query: 175 ----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++ I KT AL+ + GAI+ + + ERLR + ++G++FQ+ DD+LD Sbjct: 243 PVPLERLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDV 302 Query: 231 E---EDLPK 236 E+L K Sbjct: 303 TKSSEELGK 311 >gi|227828317|ref|YP_002830097.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25] gi|229585547|ref|YP_002844049.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27] gi|227460113|gb|ACP38799.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25] gi|228020597|gb|ACP56004.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27] Length = 331 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 14/238 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M+ L S + ++ + + + ++ ++ GGK++R ++ Sbjct: 1 MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG Sbjct: 54 SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + L AFE ++ L + + ++I + + GQ +D+ E + E + Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEY 169 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + K KT L + G I+ AS + + L +G NLGI FQ+ DD+L D Sbjct: 170 VQMIKGKTAMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDILGIIGDEK 227 >gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group] gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica Group] gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica Group] gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group] gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group] gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group] Length = 366 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 21/249 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + E + ++ LD AS + L A+RYALL GGK++R L Sbjct: 64 FDFNAYMGEKAAAVNRALD------ASIPADEPPAALHEAMRYALLAGGKRVRPALCLAA 117 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 ++ A+ AA+E +H SL+HDDLP MD+ +RRGKPT H+ Y E A++ G+ Sbjct: 118 CAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGD 177 Query: 122 GLLTYAFEIISSPKTQLKD-------NIRSQLMLSLTHNIGLQGMLGGQMLDIQD----E 170 LL+ +F ++ + D + + L IG +G++ GQ++D++ E Sbjct: 178 ALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTE 237 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + ++ I KT AL+ + GAI+ S + E LR + ++G++FQ+ DD+LD Sbjct: 238 TVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDV 297 Query: 231 E---EDLPK 236 E+L K Sbjct: 298 TKSSEELGK 306 >gi|319761830|ref|YP_004125767.1| polyprenyl synthetase [Alicycliphilus denitrificans BC] gi|317116391|gb|ADU98879.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC] Length = 297 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 2/218 (0%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78 L + + ++ L +A+RYA+L GGK++R LV ALR A Sbjct: 16 LAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACEAVGGLGQAALRAACA 75 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQ 137 +E IH YSL+HDD+P MDN +RRGKPTVH+++ + A++AG+ L AFE+++ Sbjct: 76 VELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDALQALAFELLTPEDGVP 135 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 R +L+ L + + + Q+ + ++KTGAL+ + GA Sbjct: 136 PAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGA 195 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + ++ L +G +G+ FQ+ DD+LD +D Sbjct: 196 ACGEPAGVAEQALAQYGAAIGLAFQVVDDVLDVTQDSA 233 >gi|251777602|ref|ZP_04820522.1| putative geranyltranstransferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243081917|gb|EES47807.1| putative geranyltranstransferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 289 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 129/227 (56%), Gaps = 8/227 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D+ L + + + +N + + Y++ +GGK+IR L+ SL+ N + Sbjct: 6 LKNVIDEYLKKYFIN-RNSYNKTVYESAGYSVNIGGKRIRPTLLILTYSLYKDNIEKIMP 64 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + AAIE IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+ LL A ++ Sbjct: 65 MAAAIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKS 124 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L ++ + ++ G +GM+GGQ++D+ E I + ++ + + KTG L+ + Sbjct: 125 SLELGESAL-RASYEISKAAGPEGMIGGQIVDVLSEVREISKEELEYMHEKKTGELIRVS 183 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 +G I+A+ + E L +G+ LG+ FQ+ DD+LD EE L K Sbjct: 184 IVAGGILANVPSGDIEALNEYGKKLGLAFQIKDDILDVIGTEETLGK 230 >gi|121635537|ref|YP_975782.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18] gi|120867243|emb|CAM11012.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18] Length = 324 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 112/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ D++R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVD-----SDSMRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS + L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|284162658|ref|YP_003401281.1| dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631] gi|284012655|gb|ADB58608.1| Dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631] Length = 327 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 18/229 (7%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 ++++ S+ I+ ++D L + L A + + GGK++R L Sbjct: 14 EIKKRSEVINKAMEDFL-------DLGEPEELYKASYHLIKAGGKRLRPVLTLLSCEAIG 66 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + L AIE IH ++LIHDD+ MD RRG PTVH + E TAI+AG+ L Sbjct: 67 RDWKPILPSAIAIELIHNFTLIHDDI--MDKDEYRRGVPTVHRLFGEATAILAGDTLFAK 124 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKM 183 AFEI+S + ++ IR+ +++ + GQ +D++ E D+ + + Sbjct: 125 AFEILSKCNVEAENVIRAVEVIADV----CVKICEGQYMDMEFEKRDDVSVEDYLKMVEK 180 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTG L+ +C A++ + + L FG N GI FQ+ DD+LD Sbjct: 181 KTGVLIACSCSIPAVLYG-EEKYVKPLWDFGLNCGIGFQIHDDVLDLVG 228 >gi|327482340|gb|AEA85650.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166] Length = 295 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 77/228 (33%), Positives = 126/228 (55%), Gaps = 10/228 (4%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71 +R+D L+ L + + +RL A+RY+++ GGK++R LV N + Sbjct: 10 QQRVDGCLEALFVPPLPQL-----ERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKTD 64 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AFE + Sbjct: 65 ADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAM 124 Query: 132 SSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 + + +D +R ++ L G GM+GGQ +D+ +D + ++ + KTGAL Sbjct: 125 AQAEHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGAL 184 Query: 189 MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + + GA+ + A + L + +G+ FQ+ DD+LD E D Sbjct: 185 IEASVQLGALASGRADADNLASLSQYARAIGLAFQVQDDILDVESDTA 232 >gi|300937031|ref|ZP_07151897.1| polyprenyl synthetase [Escherichia coli MS 21-1] gi|300457862|gb|EFK21355.1| polyprenyl synthetase [Escherichia coli MS 21-1] Length = 299 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLEALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|260912495|ref|ZP_05919030.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295] gi|260633374|gb|EEX51529.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295] Length = 324 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 12/223 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D IL + + + L IRY L +GGK+IR L +LF + + L Sbjct: 5 DIILSKINDYIEALPFNRKPQSLYEPIRYVLSIGGKRIRPTLALLAYNLFKDDPESILAP 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 +E H Y+L+HDDL MDN +RRG PTVH ++D TAI++G+ +L A+++++ Sbjct: 65 ACGLETYHNYTLLHDDL--MDNAALRRGMPTVHKRWDANTAILSGDSMLVLAYQLVAQC- 121 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 D+ + + ++ L L + GQ D+ E + E + + ++KT L+ Sbjct: 122 ----DSSKLKPVMELFTETAL-EIGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACG 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GA++A A Q + + L FGE +G+ FQL DD LD D Sbjct: 177 MKMGALLADAPQQDADLLYKFGEQIGLAFQLQDDFLDVYGDSK 219 >gi|241206841|ref|YP_002977937.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860731|gb|ACS58398.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 304 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 117/236 (49%), Positives = 164/236 (69%), Gaps = 3/236 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++L+ N++ I+ +LD LL +A + + L A+ YA+L GGK++R FLV E Sbjct: 6 DTFETRLKNNARDIEALLDALLSPSALSDEIARPETLRDAMHYAVLNGGKRLRPFLVVES 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+L + ALRVGAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TAI+AG+ Sbjct: 66 AALLGGDAEAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGD 125 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179 LLTYAF+II++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + Sbjct: 126 SLLTYAFDIIAAPETTLADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 185 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GA++A + ++ RLR FGE +G+ FQLADD+LD D Sbjct: 186 LQAMKTGALIRFACEAGAVIAASRPEDRRRLRAFGEKIGLAFQLADDILDLTSDAA 241 >gi|26246427|ref|NP_752466.1| geranyltranstransferase [Escherichia coli CFT073] gi|227884571|ref|ZP_04002376.1| geranyltranstransferase [Escherichia coli 83972] gi|300988027|ref|ZP_07178507.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|301049622|ref|ZP_07196573.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|26106825|gb|AAN79010.1|AE016756_193 Geranyltranstransferase [Escherichia coli CFT073] gi|227838657|gb|EEJ49123.1| geranyltranstransferase [Escherichia coli 83972] gi|300298615|gb|EFJ55000.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|300407579|gb|EFJ91117.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|307552326|gb|ADN45101.1| geranyltranstransferase [Escherichia coli ABU 83972] gi|315294200|gb|EFU53551.1| polyprenyl synthetase [Escherichia coli MS 153-1] Length = 299 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSINTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|115358000|ref|YP_775138.1| polyprenyl synthetase [Burkholderia ambifaria AMMD] gi|115283288|gb|ABI88804.1| farnesyl-diphosphate synthase [Burkholderia ambifaria AMMD] Length = 294 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L + +L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----AENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVALTDADA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLEKMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGETPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSA 231 >gi|313683408|ref|YP_004061146.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994] gi|313156268|gb|ADR34946.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994] Length = 282 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 84/222 (37%), Positives = 125/222 (56%), Gaps = 10/222 (4%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTA 72 ++ +T L L +A + + L + + GGK+ R L+ +N +A Sbjct: 2 EQFETFLGSHLP-SAPSFHPHYENSLRQML---IGGGKRFRPALLLGVVRAYNPLLIQSA 57 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 AIE +H YSLIHDDLP+MDN +RRG PT+H YDEV+AI+AG+ L TYAFE++S Sbjct: 58 YHAALAIELLHTYSLIHDDLPAMDNADLRRGIPTLHKTYDEVSAILAGDALNTYAFEVLS 117 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMC 190 + D + +L+ SL HN G +GM+ GQ +D E ++ QV M+ KTG L+ Sbjct: 118 NA--PFADRVIVKLIRSLAHNGGAEGMVLGQAIDCHFENFRLELDQVKMLHIHKTGKLIA 175 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A + GA + +E L FG +LG++FQ+ DD+LD + Sbjct: 176 AALQMGAFIVGRDDMAQE-LYDFGIDLGLLFQIQDDILDVTQ 216 >gi|330964913|gb|EGH65173.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 295 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ L+ L + + RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALEGLFQPPSPELS-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|295688780|ref|YP_003592473.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756] gi|295430683|gb|ADG09855.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756] Length = 299 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 100/233 (42%), Positives = 143/233 (61%), Gaps = 6/233 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62 L ++ + + + LD+LL + RL A+RYA LG GK++R F E Sbjct: 8 DLARRIVQAADIVTVALDELLPRADGP-----ESRLTEAMRYAALGPGKRLRPFFALETG 62 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F++ LR A+ECIH YSL+HDDLP+MD+ +RRG+PTVH QYDE TAI+AG+ Sbjct: 63 KMFDLAERPVLRAACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHKQYDEATAILAGDA 122 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L T AFEI++ P T +IRS+L+ L G +GM+GGQM+DI D V +Q+ Sbjct: 123 LQTAAFEIMAHPDTHDDAHIRSELVRKLAIASGARGMVGGQMIDILGVRDDLGAVARMQR 182 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +KTGAL+ FA E I+A A ++E+ L F ++LG+ +Q+ DD+LD E D Sbjct: 183 LKTGALIAFAFEIPLIIARAKESERHALMAFAQDLGLAYQIVDDILDAEGDEK 235 >gi|255534882|ref|YP_003095253.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium 3519-10] gi|255341078|gb|ACU07191.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium 3519-10] Length = 323 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 22/236 (9%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+E + + ++ + L + Y + GGK++R +V +F Sbjct: 4 LEEYQEIVTKAVEKYTFKDK-------PTELYDPMNYIISHGGKRLRPIMVLMANDMFGG 56 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A++ AIE H ++LIHDD+ MD +RR KPT+H + I++G+ LL + Sbjct: 57 DIQKAIKPALAIEFFHNFTLIHDDI--MDEAPLRRNKPTIHTLHGLNAGILSGDALLLKS 114 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMK 184 ++ L+ + + TH L + GQ DI E + + + K Sbjct: 115 YKFF----EDLEPELFKACIRVFTHTGLL--LCEGQQYDINFETLGDVTFNDYIRMITYK 168 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 TG L + E GA++A + + + + FG+NLGI FQ+ DD LD D KK Sbjct: 169 TGVLTASSFEIGALIAGSDFKDAKAIFNFGKNLGIAFQIMDDYLDVFGDQEQFGKK 224 >gi|320197141|gb|EFW71758.1| geranyltranstransferase [Escherichia coli WV_060327] Length = 299 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 88/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N L+ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPLVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F+V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFDVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|281177591|dbj|BAI53921.1| geranyltranstransferase [Escherichia coli SE15] Length = 299 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|170699439|ref|ZP_02890483.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10] gi|170135639|gb|EDT03923.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10] Length = 294 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L + +L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----AENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVALTDVDA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSA 231 >gi|170719766|ref|YP_001747454.1| polyprenyl synthetase [Pseudomonas putida W619] gi|169757769|gb|ACA71085.1| Polyprenyl synthetase [Pseudomonas putida W619] Length = 295 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 79/239 (33%), Positives = 131/239 (54%), Gaps = 13/239 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 + + R+D L+ L + T+ +RL +A+RY+++ GGK++R L Sbjct: 4 AYQASSQARVDAALEPLFI-----APTKELERLYAAMRYSVMNGGKRVRPLLAYAACQAL 58 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + Sbjct: 59 GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118 Query: 126 YAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182 AF + P+ + D IR ++ +L G GM+ GQ +D+ +D+ + + + Sbjct: 119 LAFSALLDPRLSPQPDAIRLAMVQALAKAAGPAGMVAGQAIDLGSVGVKLDQQALEFMHR 178 Query: 183 MKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 KTGAL+ + GA+ + A Q + + L+ + + +G+ FQ+ DD+LD E D L K+ Sbjct: 179 HKTGALIEASVRLGALASGRAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237 >gi|26987266|ref|NP_742691.1| polyprenyl synthetase [Pseudomonas putida KT2440] gi|24981909|gb|AAN66155.1|AE016243_7 geranyltranstransferase [Pseudomonas putida KT2440] Length = 295 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 79/239 (33%), Positives = 129/239 (53%), Gaps = 13/239 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 + R+D L+ L + + + +RL +A+RY+++ GGK++R L Sbjct: 4 TYQASCQARVDAALEPLFIAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEAL 58 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + Sbjct: 59 GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118 Query: 126 YAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQK 182 AF + P + D+IR ++ L G GM+GGQ +D + +D+ + + + Sbjct: 119 LAFSALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHR 178 Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 KTGAL+ + GA+ A A + + L+ + + +G+ FQ+ DD+LD E D L K+ Sbjct: 179 HKTGALIEASVRLGALASARAEPVQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237 >gi|116327487|ref|YP_797207.1| geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120231|gb|ABJ78274.1| Geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 313 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 123/224 (54%), Gaps = 14/224 (6%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L QT S + Q L A++Y+L GGK++R LV L +G+++EC Sbjct: 21 LNSQTLSILSEQSAPELFEAMKYSLVAGGKRLRPVLVLAAFGGSQNETRNTLLLGSSLEC 80 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSLIHDDLPSMDN RRG PT+H ++ E TAI+ G+ L ++AF IS + +D Sbjct: 81 IHTYSLIHDDLPSMDNDDFRRGLPTLHKRFSEATAILTGDALNSFAFYFISLIQGDNEDY 140 Query: 142 IRSQLMLSLTH-NIGLQGMLGGQMLDIQDEF---------IDETQVFMI---QKMKTGAL 188 + +L + H G GM+ GQ+ D+Q E ++ +V M+ ++KTGAL Sbjct: 141 FLHRDLLEILHTGCGAPGMVSGQIYDLQMERENTKNRNSKSEQEKVAMVQLTHRLKTGAL 200 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + A G + + + L +GE+LG++FQ+ DD+LD E Sbjct: 201 IKAALLLGNRLRKDWKKREGPLSKYGEDLGLLFQITDDILDVEG 244 >gi|238022838|ref|ZP_04603264.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147] gi|237866041|gb|EEP67177.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147] Length = 295 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 123/237 (51%), Gaps = 11/237 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN + + + +L +L +TA L A+RYA L GGK++R LV Sbjct: 1 MN-DFVTWQKTAQAHTEAVLQQMLPETALA-----PQGLHEAMRYAALDGGKRLRPMLVL 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A L N AA+ECIH YSL+HDD+P MDN +RRGKPT H+ Y TA++ Sbjct: 55 AAAELGNRVQAACEAALAAVECIHVYSLVHDDMPEMDNDTLRRGKPTCHVAYGAATALLV 114 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQV 177 G+ L T AFE++S +T L + +++ L G GM GGQ +D+ + + + + Sbjct: 115 GDALQTLAFELLSR-QTDLPAARQLRMLNVLARASGSTGMAGGQAIDLANVGHDLPQDAL 173 Query: 178 FMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + +KTGAL+ A + GA+ + L + LG+ FQ+ DD+LDC D Sbjct: 174 EQMHSLKTGALIRAAVQLGALSCPDVDEAALAALDEYAAKLGLAFQVIDDVLDCAAD 230 >gi|171320202|ref|ZP_02909262.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5] gi|171094554|gb|EDT39608.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5] Length = 294 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L + +L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----AENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVALTDGDA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGDPPSAETLAALDVYAGAVGLAFQVVDDILDVTTDSA 231 >gi|51891328|ref|YP_074019.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863] gi|51855017|dbj|BAD39175.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863] Length = 331 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 15/232 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 + S + ++ ++++T ++ L + ++ L S GGK+IR LV + Sbjct: 14 DVFSSIADDLRQVETAIEAALSTQETMLEEVSTHLLRS-------GGKRIRPALVILASR 66 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 V + V A+E IH +L+HDD+ +DN +RRG+PTV+ ++ +++ G+ L Sbjct: 67 FPGVELKQVIDVAVAVELIHMATLVHDDV--VDNADLRRGRPTVNALWNNQVSVLTGDYL 124 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 AF +++ + S+++ ++ QM D E + Sbjct: 125 FAKAFTLLADTGNNRVVRLMSEVVREMSQGELA------QMASYFDVEQTEEDYYRRIAR 178 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTG L+ AC GA+MA + + + + +G +G+ FQ+ADDLLD D Sbjct: 179 KTGYLIAEACRLGAVMAGVGEEQVQAVYDYGMGVGLSFQIADDLLDFFGDEE 230 >gi|293418488|ref|ZP_06660923.1| geranyltranstransferase [Escherichia coli B088] gi|291325016|gb|EFE64431.1| geranyltranstransferase [Escherichia coli B088] gi|323184753|gb|EFZ70124.1| geranyltranstransferase [Escherichia coli 1357] Length = 299 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTVTLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|254512243|ref|ZP_05124310.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium KLH11] gi|221535954|gb|EEE38942.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium KLH11] Length = 332 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 66/237 (27%), Positives = 117/237 (49%), Gaps = 10/237 (4%) Query: 1 MNGGLPSKLQEN-SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58 MN SK E ++ + ++ + + M + H R+ + + GGK++R L Sbjct: 1 MNVSAISKPHERLAELLAAEMEAVNGLIRTRMASDHAPRIPEVTAHLVEAGGKRLRPMLT 60 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 A LF+ + +R+ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ Sbjct: 61 LAAAQLFDYSGDHHIRLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVL 118 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 G+ L + +F+++ + +R +L+ +G + QM D E Sbjct: 119 VGDYLFSRSFQLMVETGS-----LRVLDILANASATIAEGEVL-QMTAATDLDTSEAIYL 172 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + KT AL A E G ++A AS + L +G+ LGI FQ+ADDLLD + D Sbjct: 173 QVVRGKTAALFSAATEVGGVIAGASDEQVRALYDYGDALGIAFQIADDLLDYQGDSA 229 >gi|146284017|ref|YP_001174170.1| geranyltranstransferase [Pseudomonas stutzeri A1501] gi|145572222|gb|ABP81328.1| geranyltranstransferase [Pseudomonas stutzeri A1501] Length = 295 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 77/228 (33%), Positives = 127/228 (55%), Gaps = 10/228 (4%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71 +R+D L+ L + + +RL A+RY+++ GGK++R LV N + + Sbjct: 10 QQRVDGCLEALFVPPLPQL-----ERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKAS 64 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL + AFE + Sbjct: 65 ADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAM 124 Query: 132 SSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 + + +D +R ++ L G GM+GGQ +D+ +D + ++ + KTGAL Sbjct: 125 AQERHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGAL 184 Query: 189 MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + + GA+ + A + L + +G+ FQ+ DD+LD E D Sbjct: 185 IEASVQLGALASGRADADNLASLSQYARAIGLAFQVQDDILDVESDTA 232 >gi|110804443|ref|YP_687963.1| geranyltranstransferase [Shigella flexneri 5 str. 8401] gi|110613991|gb|ABF02658.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella flexneri 5 str. 8401] Length = 299 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|240017367|ref|ZP_04723907.1| IspB [Neisseria gonorrhoeae FA6140] Length = 324 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIRVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|229592837|ref|YP_002874956.1| geranyltranstransferase [Pseudomonas fluorescens SBW25] gi|229364703|emb|CAY52662.1| geranyltranstransferase [Pseudomonas fluorescens SBW25] Length = 295 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 78/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + + R++ L+ L + + M+ RL A+RY+++ GGK++R L Sbjct: 2 IDAYQASSQARVNAALEPLFVAPSPEMK-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGL 116 Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + P + + +R +++ +L H G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFSALLDPALSSVNAELRLRMVTALAHAAGPAGMVGGQAIDMGSVSLKLDQQALEHM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ A GA+ + A + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEAAVHLGALASGRAEAPQLAALKTYALAIGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|172062807|ref|YP_001810458.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6] gi|171995324|gb|ACB66242.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6] Length = 294 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L + +L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----AENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVALTDVDA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLEKMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSA 231 >gi|59802000|ref|YP_208712.1| IspB [Neisseria gonorrhoeae FA 1090] gi|194099557|ref|YP_002002687.1| IspB [Neisseria gonorrhoeae NCCP11945] gi|239999762|ref|ZP_04719686.1| IspB [Neisseria gonorrhoeae 35/02] gi|240014919|ref|ZP_04721832.1| IspB [Neisseria gonorrhoeae DGI18] gi|240081510|ref|ZP_04726053.1| IspB [Neisseria gonorrhoeae FA19] gi|240113789|ref|ZP_04728279.1| IspB [Neisseria gonorrhoeae MS11] gi|240116523|ref|ZP_04730585.1| IspB [Neisseria gonorrhoeae PID18] gi|240118747|ref|ZP_04732809.1| IspB [Neisseria gonorrhoeae PID1] gi|240121989|ref|ZP_04734951.1| IspB [Neisseria gonorrhoeae PID24-1] gi|240124286|ref|ZP_04737242.1| IspB [Neisseria gonorrhoeae PID332] gi|240126497|ref|ZP_04739383.1| IspB [Neisseria gonorrhoeae SK-92-679] gi|240128960|ref|ZP_04741621.1| IspB [Neisseria gonorrhoeae SK-93-1035] gi|254494548|ref|ZP_05107719.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291] gi|260439720|ref|ZP_05793536.1| IspB [Neisseria gonorrhoeae DGI2] gi|268595575|ref|ZP_06129742.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02] gi|268597610|ref|ZP_06131777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19] gi|268599861|ref|ZP_06134028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11] gi|268602196|ref|ZP_06136363.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18] gi|268604462|ref|ZP_06138629.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1] gi|268682915|ref|ZP_06149777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332] gi|268685081|ref|ZP_06151943.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679] gi|268687344|ref|ZP_06154206.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035] gi|291042968|ref|ZP_06568706.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2] gi|59718895|gb|AAW90300.1| putative octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA 1090] gi|193934847|gb|ACF30671.1| IspB [Neisseria gonorrhoeae NCCP11945] gi|226513588|gb|EEH62933.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291] gi|268548964|gb|EEZ44382.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02] gi|268551398|gb|EEZ46417.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19] gi|268583992|gb|EEZ48668.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11] gi|268586327|gb|EEZ51003.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18] gi|268588593|gb|EEZ53269.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1] gi|268623199|gb|EEZ55599.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332] gi|268625365|gb|EEZ57765.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679] gi|268627628|gb|EEZ60028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035] gi|291013107|gb|EFE05076.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2] gi|317165053|gb|ADV08594.1| IspB [Neisseria gonorrhoeae TCDC-NG08107] Length = 324 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIRVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|293398312|ref|ZP_06642503.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62] gi|291611236|gb|EFF40320.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62] Length = 324 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|332187832|ref|ZP_08389566.1| polyprenyl synthetase family protein [Sphingomonas sp. S17] gi|332012182|gb|EGI54253.1| polyprenyl synthetase family protein [Sphingomonas sp. S17] Length = 296 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 105/243 (43%), Positives = 142/243 (58%), Gaps = 11/243 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M L L E ++ ID +L + L +A+R+A + GGK++R LV Sbjct: 1 MMLSLRDALDEVAQDIDRRFAQVLADPGDPRAS-----LYAAMRHAAIGGGKRLRPLLVF 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A LF+V+ A V A+E IH YSLIHDDLP+MD+ +RRGKPTVH +DE TAI+A Sbjct: 56 ATARLFDVDRDCAGWVATALEAIHVYSLIHDDLPAMDDDDMRRGKPTVHKAFDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ L AFEI++ P T +RS+L+L L G GM GGQM+D++ E D V Sbjct: 116 GDCLHALAFEILADPSTHPDPFVRSELILDLARASGPSGMAGGQMMDLEAERQIFDLPTV 175 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--- 234 +Q+MKTGAL+C A E+GAI+ + LR + +LG+ FQ+ADDLLD E D Sbjct: 176 TRLQQMKTGALICAAVEAGAILGRVPPEGRTHLRGYAHDLGLAFQIADDLLDAEGDEAVA 235 Query: 235 PKK 237 KK Sbjct: 236 GKK 238 >gi|319781104|ref|YP_004140580.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166992|gb|ADV10530.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 305 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 112/233 (48%), Positives = 154/233 (66%), Gaps = 3/233 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 L + ++ +L LL A + DRL++A+R+ L GGK++R FLV E A Sbjct: 8 AFEMALIRRAAAVEVLLRRLLDDRALSGEIARPDRLMAAMRHGVLNGGKRLRPFLVMESA 67 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF+ + ALRV AA+EC+HCYSLIHDDLP+MD+ +RRG+PTVH +DE TAI+AG+ Sbjct: 68 ALFSADGEAALRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHKAFDEATAILAGDA 127 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180 LLT AF+II+ T L R+ L+L+L G GM+GGQ LD++ E DE + + Sbjct: 128 LLTLAFDIIAGESTALPAERRAALVLALARAAGAGGMVGGQKLDLEAEQTPPDEAGIIRL 187 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 Q MKTGAL+ FACE+GA++A A +++ERL FG +G+ FQLADDLLD D Sbjct: 188 QAMKTGALIRFACEAGALIAGAPADDRERLAEFGSAIGLAFQLADDLLDLTGD 240 >gi|254561671|ref|YP_003068766.1| geranyltranstransferase [Methylobacterium extorquens DM4] gi|254268949|emb|CAX24910.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Methylobacterium extorquens DM4] Length = 320 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 101/238 (42%), Positives = 146/238 (61%), Gaps = 7/238 (2%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60 G +L + + ++T L DLL T + RL+ A+R+A+LGG K++R FL E Sbjct: 17 TGDFTHRLAQVADTVETFLVDLLGPTLQAGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + AL GA +E +HCYSL+HDDLP+MD+ +RRGKPTVH YDE TAI+ G Sbjct: 77 TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDE 174 + L T AFE+ + P+ Q IR++L+L L GL GM+GGQ+LD+ E +D Sbjct: 137 DALQTLAFEVTADPRWQPDPAIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPATMDI 196 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q MKTGA++ F+ E+GA++ A+ +E+ L +G+ LG FQ+ADD+LD E Sbjct: 197 DDTLRMQAMKTGAILAFSVEAGALVGGANADERAALLRYGKALGQAFQVADDILDREA 254 >gi|315229911|ref|YP_004070347.1| dimethylallyltransferase [Thermococcus barophilus MP] gi|315182939|gb|ADT83124.1| dimethylallyltransferase [Thermococcus barophilus MP] Length = 342 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 17/238 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61 L ++E +K +D ++ + + + L A R Y L GGK++R F+V Sbjct: 5 DALFRSIKEKAKVVDDVI-------FELLPEKEPEELYEATRHYPLAGGKRVRPFVVLTA 57 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A + AL AAIE +H Y+LIHDD+ MD RRG+ TVH + AI+AG+ Sbjct: 58 AEAVGGDWRKALYPAAAIEILHTYTLIHDDIMDMDE--TRRGRATVHKVWGINMAILAGD 115 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVF 178 + + F+ ++ K + +++ ++ + GQ LD++ E D + Sbjct: 116 LMYSVVFD--AATKAPVSAEKIVEIVRAIARAGI--EICEGQALDLEFETRDTVTIEEYL 171 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KT AL + + G I+ +Q + L +G N+G+ FQ+ DD+LD D K Sbjct: 172 KMIDGKTAALFDASAKIGGIIGTDNQEYIQALSKYGRNVGMAFQIWDDVLDLIADEKK 229 >gi|297619910|ref|YP_003708015.1| Dimethylallyltranstransferase [Methanococcus voltae A3] gi|297378887|gb|ADI37042.1| Dimethylallyltranstransferase [Methanococcus voltae A3] Length = 316 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75 + IL+ + + + + N L +A ++ LL GGK+IR +L +L + Sbjct: 4 EEILNSMSKELEKYFEKDSN--LYNASKHLLLAGGKRIRPYLSIMAYNLKKDGLDEIMAP 61 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 ++E IH Y+L+HDD+ MDN RRGKPTVH Y E AI+AG+ L AFE +S+ Sbjct: 62 ALSVELIHNYTLVHDDI--MDNDDERRGKPTVHKVYGEPIAILAGDLLYAKAFEALSTID 119 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFAC 193 +K + + +LS + GQ D++ E Q + KTGAL+ Sbjct: 120 DSIKAH-KVLKILSKA----CVEVCEGQTDDMEFETTFPTMEQYVNMISKKTGALIEAPI 174 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 GAIMA + E E L + + +GI FQ+ DD+LD D Sbjct: 175 LIGAIMADCTMEETEALYQYSKRIGINFQIQDDILDLIGDQK 216 >gi|62181813|ref|YP_218230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62129446|gb|AAX67149.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|267995503|gb|ACY90388.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|322716302|gb|EFZ07873.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 381 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 15/241 (6%) Query: 3 GGLPSKLQENSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLV 58 G + N ++I+ + D+ A+ ++ ++D +L++ + Y ++ GGK+IR + Sbjct: 51 GAISPAFAMNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIA 110 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 A + + A IE IH +L+HDD+ +D +RRGK T + + +++ Sbjct: 111 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 168 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 G+ + T AF++++S + ++ ++S N+ +G + Q++++ D I E Sbjct: 169 VGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYM 222 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 + KT L A + I+A + +++ L+ +G LG FQL DDLLD D L Sbjct: 223 RVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLG 282 Query: 236 K 236 K Sbjct: 283 K 283 >gi|167770736|ref|ZP_02442789.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM 17241] gi|167667331|gb|EDS11461.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM 17241] Length = 293 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 80/232 (34%), Positives = 125/232 (53%), Gaps = 8/232 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + +++ + L D L +Q ++ A+RY+LL GK++R+ LV E A Sbjct: 3 FDEQFASYARQTNDALRDCLRYPGVRLQAA----VVDAMRYSLLDAGKRLRAALVLEFAR 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + A + AIE +H YSLIHDDLP MDN RRGKP+ H ++ E TA++AG+ L Sbjct: 59 LASAPREGATALACAIEMLHAYSLIHDDLPCMDNDDFRRGKPSCHKEFGESTALLAGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 LT AFE + L D R + + +L+ G+ GM+GGQ++D + +DE + + Sbjct: 119 LTLAFETAAGAPL-LTDLQRVEAVCTLSKAGGVCGMIGGQVIDLACEGNTVDEATLDTLC 177 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +KTGAL+ A G + A + + + +G+ FQ+ DD+LD D Sbjct: 178 TLKTGALLRAAARLGCLAGKADKKMYDAADRYAAAVGLAFQITDDILDVTGD 229 >gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 295 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ L+ L + + +RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGASCAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|225075990|ref|ZP_03719189.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens NRL30031/H210] gi|224952705|gb|EEG33914.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens NRL30031/H210] Length = 324 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 112/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L ++ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPDDLAKVNVVINQAV-QSDVALISQIGTYIISA------GGKRLRPIITILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEQYLQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|332638330|ref|ZP_08417193.1| farnesyl-diphosphate synthase [Weissella cibaria KACC 11862] Length = 287 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 85/221 (38%), Positives = 121/221 (54%), Gaps = 7/221 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 KL E S + ++D L +H + N + A+ YA++ GGK++R L A + Sbjct: 2 KLSEFSATVVPQIEDKLAAELAH--STSNQTMRDAMTYAVMAGGKRLRPLLTLAVAQSYG 59 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + LR +A+E IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ L Sbjct: 60 LGINGLLRAASALELIHTYSLIHDDLPAMDNDDMRRGKPTTHKAFGEDVAILAGDALQPL 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKM 183 A++ ++S L +++L L L G GM+ GQ++D+ I QV I Sbjct: 120 AYQWLAS-DPLLTTPQKAELTLQLALASGADGMVAGQVMDMAATNAATISLDQVKAIHYR 178 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 KTGAL+ +A +G IMAHAS KE L FG G+ FQ+ Sbjct: 179 KTGALIAYAAIAGGIMAHASDEVKETLWNFGMAYGLAFQIK 219 >gi|330826310|ref|YP_004389613.1| polyprenyl synthetase [Alicycliphilus denitrificans K601] gi|329311682|gb|AEB86097.1| Polyprenyl synthetase [Alicycliphilus denitrificans K601] Length = 297 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 2/218 (0%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78 L + + ++ L +A+RYA+L GGK++R LV ALR A Sbjct: 16 LAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACEAVGGLGQAALRAACA 75 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQ 137 +E IH YSL+HDD+P MDN +RRGKPTVH+++ + A++AG+ L AFE+++ Sbjct: 76 VELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDALQALAFELLTPEDGVP 135 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 R +L+ L + + + Q+ + ++KTGAL+ + GA Sbjct: 136 PAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGA 195 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++ ++ L +G +G+ FQ+ DD+LD +D Sbjct: 196 ACGEPARVAEQALAQYGAAIGLAFQVVDDVLDVTQDSA 233 >gi|187932330|ref|YP_001886591.1| geranyltranstransferase [Clostridium botulinum B str. Eklund 17B] gi|187720483|gb|ACD21704.1| putative geranyltranstransferase [Clostridium botulinum B str. Eklund 17B] Length = 289 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 122/220 (55%), Gaps = 5/220 (2%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + ++D+ L + + +N + + Y++ +GGK+IR L+ SL+ N + Sbjct: 6 LKNVIDEYL-KNYFINRNSYNKVVYESAGYSVNIGGKRIRPILLILTYSLYKDNIEKIMP 64 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + AAIE IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+ LL A ++ Sbjct: 65 MAAAIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKS 124 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 +L ++ ++ G +GM+GGQ++D+ E I + ++ + + KTG L+ + Sbjct: 125 SLELGESALKAS-YEISKAAGPEGMIGGQVVDVLSEVSEISKEELEYMHEKKTGELIRVS 183 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +G I+A + E L +G+ LG+ FQ+ DD+LD Sbjct: 184 IVAGGILARVPSGDIEALNEYGKKLGLAFQIKDDILDVIG 223 >gi|116492587|ref|YP_804322.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745] gi|116102737|gb|ABJ67880.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745] Length = 296 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 87/236 (36%), Positives = 133/236 (56%), Gaps = 11/236 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN +++N + +D +D+L + N L ++Y++ GGK++R ++ Sbjct: 1 MNSNFDDFVKQNVELLDQHIDELFDS-----DSTLNTDLKMMMKYSIDAGGKRVRPLVLL 55 Query: 60 ECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 F L V AA+E +H YSLIHDDLP+MDN +RRG+PT H ++ E AI+ Sbjct: 56 AILKAFGKTPNYDILTVAAALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKKFGEAEAIL 115 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQ 176 AG+ LLT AF+ ISS T LKD I+S+L+LSL + G GM+ GQ+LDIQ + Sbjct: 116 AGDALLTVAFQWISS--TNLKDRIKSELVLSLASDAGASGMIAGQLLDIQGNQRHYSLAE 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + +KTG ++ F E+ IM + E ++ F N G+ FQ+ DD++D E Sbjct: 174 LKHLHHLKTGKMLLFPAEAALIMKPSKLQVAELVKDFMANFGLAFQIHDDIIDVTE 229 >gi|218688284|ref|YP_002396496.1| geranyltranstransferase [Escherichia coli ED1a] gi|218425848|emb|CAR06654.1| geranyltranstransferase [Escherichia coli ED1a] Length = 299 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|149202564|ref|ZP_01879536.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035] gi|149143846|gb|EDM31880.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035] Length = 287 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 91/233 (39%), Positives = 132/233 (56%), Gaps = 15/233 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 + ++L ++ I T L +L + + +RYA GGK+IR FLV E A L Sbjct: 1 MQARLAAEAETIQTHLSRVLAPFGT-------GPVAEGMRYATQGGKRIRGFLVMESARL 53 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 +V A+ AIE +H YSL+HDDLP+MDN +RRG+PTVHI++DE TAI+ G+ L Sbjct: 54 HDVPETAAIWPATAIEALHAYSLVHDDLPAMDNDDLRRGQPTVHIKWDEATAILVGDALQ 113 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180 + AFE+++ P +R+ L LSL G QGM+ GQ LDI E + ++ + Sbjct: 114 SLAFELVAHPDCG-PAEVRAGLTLSLARAAGGQGMVLGQALDIAAETATSPLSLDEITTL 172 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 Q KTGAL+ ++ +GA MAHA L + LG+ FQ+ DD++D D Sbjct: 173 QAGKTGALILWSATAGACMAHAD---MTPLSTYARALGLAFQIQDDVIDVTGD 222 >gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group] Length = 366 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 21/249 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + E + ++ LD AS + L A+RYALL GGK++R L Sbjct: 64 FDFNAYMGEKAAAVNRALD------ASIPADEPPAALHEAMRYALLAGGKRVRPALCLAA 117 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 ++ A+ AA+E +H SL+HDDLP MD+ +RRGKPT H+ Y E A++ G+ Sbjct: 118 CAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGD 177 Query: 122 GLLTYAFEIISSPKTQLKD-------NIRSQLMLSLTHNIGLQGMLGGQMLDIQD----E 170 LL+ +F ++ + D + + L IG +G++ GQ++D++ E Sbjct: 178 ALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTE 237 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + ++ I KT AL+ + GAI+ S + E LR + ++G++FQ+ DD+LD Sbjct: 238 TVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDV 297 Query: 231 E---EDLPK 236 E+L K Sbjct: 298 TKSSEELGK 306 >gi|78776538|ref|YP_392853.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251] gi|78497078|gb|ABB43618.1| farnesyl-diphosphate synthase [Sulfurimonas denitrificans DSM 1251] Length = 282 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 6/216 (2%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-ALRVGAA 78 ++ LL ++ H + + + GGK+ R L+ + +N + A A Sbjct: 4 FENFLLNHLPASKSIHPTYEEAVQKMLIAGGKRFRPALLLGVVNAYNPLMIGGAYHAAYA 63 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE +H YSLIHDDLP+MDN +RRG+PT+H+ +DEVTAI+AG+ L TYAFE++S+ Sbjct: 64 IELLHTYSLIHDDLPAMDNSPLRRGEPTLHVLFDEVTAILAGDALNTYAFEVLSNA--PF 121 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196 D R +L+ L N GL GM+ GQ +D E + V ++ KT L+ + + G Sbjct: 122 SDFTRVELIRELATNGGLNGMVLGQAIDCYFENRVLSIDDVKILHTNKTAKLIAASLKMG 181 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 AI+ + E L FG LG++FQ+ DD+LD + Sbjct: 182 AIIVG-EEKLAETLYDFGIKLGLLFQIQDDILDVTQ 216 >gi|311280690|ref|YP_003942921.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] gi|308749885|gb|ADO49637.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] Length = 299 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 92/242 (38%), Positives = 133/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ R + L + Q N L+ A+ Y ALLGGK++R FLV Sbjct: 2 DFTQQLQTCVTRANDALRQFI-----EPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F V+ T AA+ECIH YSL+HDDLP+MD+ +RRG+PT H+++ E AI+AG+ Sbjct: 57 TMFGVSLTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I+S P ++ D R ++ L G+ GM GGQ LD+Q E +D + Sbjct: 117 LQTLAFSILSDAPMPEVADRDRIAMISELAQASGVAGMCGGQALDLQAEGQQVDLAALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGEKGRAALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|300767239|ref|ZP_07077151.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300495058|gb|EFK30214.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 308 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 13/237 (5%) Query: 1 MNGGLPSKLQENSK-RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLV 58 MN L ++ + + +I+ LD+ L + L A+RY+ L GGK++R L Sbjct: 13 MNKQLLTEFESKWRPQINQYLDEQLQACSD------QSTLTDAMRYSVLAGGKRLRPLLT 66 Query: 59 TECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 F++ A LR A+E +H YSLIHDDLP+MDN +RRG+PT H+++ E AI Sbjct: 67 LAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMDNDQLRRGEPTNHVKFGEDVAI 126 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175 +AG+ L FE I+ + L +I + L+L G +GM+ GQ+ D+ + + Sbjct: 127 LAGDALQPLTFEWIAD--SGLPASIVANQTLALAQATGPRGMVAGQIADVLGAGQHLALP 184 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + + KTGAL+ +A ++G I A +E L + + G+ FQ+ DD+LD Sbjct: 185 ALQQLHREKTGALIHYAVQAGLIQAQVQPAVQELLLQYADAYGLAFQIYDDILDVTS 241 >gi|224373694|ref|YP_002608066.1| geranyltranstransferase [Nautilia profundicola AmH] gi|223588370|gb|ACM92106.1| geranyltranstransferase [Nautilia profundicola AmH] Length = 281 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 77/223 (34%), Positives = 124/223 (55%), Gaps = 8/223 (3%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAA 78 ++D + + + H + L GGK+ R L+ + A A Sbjct: 1 MEDFIKKNLIKAPSFHPYYEKALNEMLLAGGKRFRPKLLLSVVKAYEPLLVENAKYAAYA 60 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE IH YSLIHDDLP+MDN +RRG PT+H+ YDE+TA++AG+ L TYAFE++S K+ Sbjct: 61 IELIHTYSLIHDDLPTMDNADLRRGHPTLHVTYDEITALLAGDALNTYAFEVLS--KSPF 118 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196 +++ +L+ L+ N G GM+ GQ +D E ++ ++ + KT L+ + + G Sbjct: 119 SSDVKIELIKILSENAGAGGMVLGQAIDCYFENKKLNLDELKFLHLNKTAKLIAASLQMG 178 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 A++ + + +E+L FG +LGI+FQ+ DD+LD E+ K Sbjct: 179 AVIVNLDKKLQEKLYNFGIDLGILFQVQDDILDVTMSSEEAGK 221 >gi|331018236|gb|EGH98292.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 295 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ L+ L + + RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPELS-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLSSRDAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|49086036|gb|AAT51323.1| PA4043 [synthetic construct] Length = 296 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 10/236 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + R+D LD L + +Q RL A+RY+++ GGK++R L Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL Sbjct: 57 ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 AFE+++ + +++ ML+ G GM+GGQ +D+ +D+ + ++ Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ + GA+ + A L + E +G+ FQ+ DD+LD E D Sbjct: 177 HRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTA 232 >gi|163786604|ref|ZP_02181052.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1] gi|159878464|gb|EDP72520.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1] Length = 330 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 12/223 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 + I+ L + + L + I Y L LGGK++R L A +F A Sbjct: 8 QNIEQYQKSFLNYLEDFAIDKQPNNLYAPINYILKLGGKRLRPVLTLMTAEVFGEEAKNA 67 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + ++E H +SL+HDD+ MD +RRGK TVH +++ T I++G+ +L A+++ Sbjct: 68 MNAALSVEVFHNFSLVHDDI--MDEAPLRRGKKTVHEKWNLNTGILSGDAMLILAYQLFE 125 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALM 189 + + + L L+ + + GQ DI E ++ + + + KT L+ Sbjct: 126 NYEPETF------LALAKLFSKTALEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLV 179 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A + GAI+A AS ++ + FG LG+ FQL DD LD Sbjct: 180 GAAMKMGAIVAKASAEDQNAIYDFGSYLGVAFQLQDDYLDAFG 222 >gi|312869913|ref|ZP_07730052.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3] gi|311094498|gb|EFQ52803.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3] Length = 291 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 78/232 (33%), Positives = 120/232 (51%), Gaps = 12/232 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 + L++ R+ + LD L L ++++Y+ L GGK++R L Sbjct: 1 MVESLEQLKARVTSYLDTHLANDVD------QSTLAASMQYSVLAGGKRLRPTLTLATVE 54 Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F +R A+E +H YSLIHDDLP+MDN +RRG PT H ++ A +AG+G Sbjct: 55 IFGGELTEDVVRAATALELLHTYSLIHDDLPAMDNDDLRRGAPTNHRKFGAGMATLAGDG 114 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180 LLT AF+ ++ QL ++SQL L L G GM+ GQ DI+ + Q+ + Sbjct: 115 LLTLAFQWVTD--NQLPATMKSQLALELAKAAGPAGMVAGQARDIEGTGRRLTLDQLRYL 172 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ +A +G I+ + L FG + G+ FQ+ DDL+D Sbjct: 173 HRQKTGALLRYAVLAGGIITVQPAAVQRLLAQFGSSYGLAFQIYDDLMDVVG 224 >gi|116331899|ref|YP_801617.1| geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116125588|gb|ABJ76859.1| Geranyltranstransferase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 313 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 82/244 (33%), Positives = 126/244 (51%), Gaps = 17/244 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 + + L+ QT S + Q L A++Y+L GGK++R LV Sbjct: 4 SSFSAIFHAYRVTFENFLNS---QTLSILSEQSAPELFEAMKYSLVAGGKRLRPVLVLAA 60 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L +G+++ECIH YSLIHDDLPSMDN RRG PT+H ++ E TAI+ G+ Sbjct: 61 FGGSQNETRNTLLLGSSLECIHTYSLIHDDLPSMDNDDFRRGLPTLHKRFSEATAILTGD 120 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEF--------- 171 L ++AF IS + +D + +L + H G GM+ GQ+ D+Q E Sbjct: 121 ALNSFAFYFISLIQGDNEDYFLHRDLLEILHTGCGAPGMVSGQIYDLQMERENTKNRNSK 180 Query: 172 IDETQVFMI---QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 ++ +V M+ ++KTGAL+ A G + + + L +GE+LG++FQ+ DD+L Sbjct: 181 SEQEKVAMVQLTHRLKTGALIKAALLLGNRLRKDWKKREGPLSKYGEDLGLLFQITDDIL 240 Query: 229 DCEE 232 D E Sbjct: 241 DVEG 244 >gi|292487451|ref|YP_003530323.1| geranyltranstransferase [Erwinia amylovora CFBP1430] gi|291552870|emb|CBA19915.1| geranyltranstransferase [Erwinia amylovora CFBP1430] Length = 264 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 80/198 (40%), Positives = 110/198 (55%), Gaps = 5/198 (2%) Query: 43 IRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 + Y ALLGGK++R FLV + + AAIECIH YSLIHDDLP+MDN +R Sbjct: 1 MEYGALLGGKRLRPFLVYATGDMLRADDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLR 60 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGML 160 RG+PT HI++ E +AI+AG+ L T AF I++ P + R ++ L G+ GM Sbjct: 61 RGQPTCHIKFGEESAILAGDALQTLAFSILADAPMPGVMAESRIAMLSELAQASGVAGMC 120 Query: 161 GGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENL 217 GGQ LD+ E + ++ I + KTGAL+ A GA+ A S L F + Sbjct: 121 GGQALDLAAEGKKVTLNELEQIHRHKTGALIRSAVRLGALTAGESGRAALPALDRFANAI 180 Query: 218 GIIFQLADDLLDCEEDLP 235 G+ FQ+ DD+LD D Sbjct: 181 GLAFQVQDDILDVTGDTE 198 >gi|163851951|ref|YP_001639994.1| polyprenyl synthetase [Methylobacterium extorquens PA1] gi|218530703|ref|YP_002421519.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4] gi|240139077|ref|YP_002963552.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Methylobacterium extorquens AM1] gi|163663556|gb|ABY30923.1| Polyprenyl synthetase [Methylobacterium extorquens PA1] gi|218523006|gb|ACK83591.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4] gi|240009049|gb|ACS40275.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Methylobacterium extorquens AM1] Length = 320 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 101/238 (42%), Positives = 146/238 (61%), Gaps = 7/238 (2%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60 G +L + + ++T L DLL T + RL+ A+R+A+LGG K++R FL E Sbjct: 17 TGDFTHRLAQVADTVETFLVDLLGPTLQAGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + AL GA +E +HCYSL+HDDLP+MD+ +RRGKPTVH YDE TAI+ G Sbjct: 77 TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDE 174 + L T AFE+ + P+ Q IR++L+L L GL GM+GGQ+LD+ E +D Sbjct: 137 DALQTLAFEVTADPRWQPDPAIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPATMDI 196 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q MKTGA++ F+ E+GA++ A+ +E+ L +G+ LG FQ+ADD+LD E Sbjct: 197 DDTLRMQAMKTGAILAFSVEAGALVGGANADERAALLRYGKALGQAFQVADDILDREA 254 >gi|238918995|ref|YP_002932509.1| polyprenyl synthetase, [Edwardsiella ictaluri 93-146] gi|238868563|gb|ACR68274.1| polyprenyl synthetase, putative [Edwardsiella ictaluri 93-146] Length = 301 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 88/239 (36%), Positives = 129/239 (53%), Gaps = 10/239 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 +++ +R+D L L + L+ A+RY ALLGGK++R +LV Sbjct: 2 ASFEQQMKTCHQRVDAALSRALDTL-----PFADGPLVGAMRYGALLGGKRLRPYLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 SLF + AA+ECIH YSL+HDDLP+MD+ +RRG+PT HI++ E AI+AG+ Sbjct: 57 GSLFGCSPTALDAPAAAVECIHAYSLLHDDLPAMDDDDLRRGQPTCHIKFGEAHAILAGD 116 Query: 122 GLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178 L T AF I++ + + D R Q++ L H G+ GM GGQ LD++ E + + Sbjct: 117 ALQTLAFSILADGQMPGVTDRDRLQMLSELAHASGVAGMCGGQALDLEAEGRHVALAALE 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTGAL+ A GA+ A N L + +G+ FQ+ DD+LD D K Sbjct: 177 QIHRHKTGALIRCAVRMGALAGGAPGRNALPVLDRYAAAIGLAFQVQDDILDVVGDSSK 235 >gi|298206983|ref|YP_003715162.1| putative isoprenoid biosynthesis related protein [Croceibacter atlanticus HTCC2559] gi|83849617|gb|EAP87485.1| putative isoprenoid biosynthesis related protein [Croceibacter atlanticus HTCC2559] Length = 324 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 13/227 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 + I + + + S + + + L I Y L LGGK++R LV +F ++ Sbjct: 2 QEISSYREAFIAHMNSKVSVKEPENLYEPISYILNLGGKRLRPILVLMATEIFGEDYTKG 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L A+E H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +L A+++ Sbjct: 62 LDAALAVEVFHNFSLVHDDI--MDDAPLRRGKDTVHEKWDLNTGILSGDAMLINAYQLFE 119 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALM 189 + L+ + GQ DI E D+ + + + KT L+ Sbjct: 120 NYDGSTFKE------LAKLFTKTAIEVCEGQQYDIDFETRDDVTIPEYLKMIEFKTAVLV 173 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + GAI+A+A + K+++ FG LG+ FQL DD LD D PK Sbjct: 174 GAALQMGAIVANAEDSCKDKIYEFGCLLGLAFQLQDDYLDAFGD-PK 219 >gi|161616314|ref|YP_001590279.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194443184|ref|YP_002042563.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449256|ref|YP_002047334.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472845|ref|ZP_03078829.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736065|ref|YP_002116255.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195873559|ref|ZP_02697387.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197250149|ref|YP_002148230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264749|ref|ZP_03164823.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197301014|ref|ZP_02663064.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|198241919|ref|YP_002217276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386848|ref|ZP_03213460.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204931208|ref|ZP_03222002.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205357197|ref|ZP_02345799.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205358083|ref|ZP_02575589.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205358511|ref|ZP_02656973.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205359199|ref|ZP_02668072.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205359738|ref|ZP_02831626.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205360595|ref|ZP_02684656.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224585102|ref|YP_002638901.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|161365678|gb|ABX69446.1| hypothetical protein SPAB_04122 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401847|gb|ACF62069.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407560|gb|ACF67779.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459209|gb|EDX48048.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711567|gb|ACF90788.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633125|gb|EDX51539.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197213852|gb|ACH51249.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243004|gb|EDY25624.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289078|gb|EDY28447.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936435|gb|ACH73768.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603946|gb|EDZ02491.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204319975|gb|EDZ05181.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323255|gb|EDZ11094.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327615|gb|EDZ14379.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333924|gb|EDZ20688.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337771|gb|EDZ24535.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343490|gb|EDZ30254.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348475|gb|EDZ35106.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224469630|gb|ACN47460.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|312914332|dbj|BAJ38306.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087750|emb|CBY97514.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225271|gb|EFX50330.1| Octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615309|gb|EFY12230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618332|gb|EFY15223.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622863|gb|EFY19707.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626815|gb|EFY23612.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631384|gb|EFY28144.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635349|gb|EFY32063.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643348|gb|EFY39912.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647080|gb|EFY43581.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648883|gb|EFY45328.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655075|gb|EFY51386.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657678|gb|EFY53946.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664174|gb|EFY60372.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667457|gb|EFY63619.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674705|gb|EFY70797.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675662|gb|EFY71735.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682298|gb|EFY78321.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|323131665|gb|ADX19095.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195894|gb|EFZ81065.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199011|gb|EFZ84108.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204289|gb|EFZ89298.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207636|gb|EFZ92583.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323214747|gb|EFZ99496.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221227|gb|EGA05653.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323233295|gb|EGA17389.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239332|gb|EGA23382.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242417|gb|EGA26443.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323255257|gb|EGA39034.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262720|gb|EGA46276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264030|gb|EGA47538.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269416|gb|EGA52871.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625055|gb|EGE31400.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629328|gb|EGE35671.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 370 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 15/241 (6%) Query: 3 GGLPSKLQENSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLV 58 G + N ++I+ + D+ A+ ++ ++D +L++ + Y ++ GGK+IR + Sbjct: 40 GAISPAFAMNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIA 99 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 A + + A IE IH +L+HDD+ +D +RRGK T + + +++ Sbjct: 100 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 157 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 G+ + T AF++++S + ++ ++S N+ +G + Q++++ D I E Sbjct: 158 VGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYM 211 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 + KT L A + I+A + +++ L+ +G LG FQL DDLLD D L Sbjct: 212 RVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLG 271 Query: 236 K 236 K Sbjct: 272 K 272 >gi|218549919|ref|YP_002383710.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469] gi|218357460|emb|CAQ90099.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469] Length = 299 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|255635048|gb|ACU17882.1| unknown [Glycine max] Length = 342 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 18/243 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60 L + +I+ LD+ + Q ++ A+RY++L G K+ + Sbjct: 48 FDLKTYCANLMVQINQKLDEAI-------PVQFPPQIYEAMRYSVLAKGAKRAPPVMCIS 100 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 LF + L A A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG Sbjct: 101 ACELFGGSRLAAFPTACALEMVHAASLIHDDLPCMDDSPSRRGQPSNHTIYGVDMAILAG 160 Query: 121 NGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 + L F I S P + ++ +++ + ++G GM GQ LD++ V Sbjct: 161 DALFPLGFRHIVSQTPSDLVPESHLLRVIAEIARSVGSTGMAAGQFLDLEG---GPNAVG 217 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD----CEEDL 234 IQ+ K G + + G +A A +E ERLR +G +G+++ + DD+++ E D Sbjct: 218 FIQEKKFGEMGESSAVCGGFLAGAEDDEIERLRRYGRAVGVLYAVVDDIIEERLKVEGDG 277 Query: 235 PKK 237 +K Sbjct: 278 NRK 280 >gi|289663219|ref|ZP_06484800.1| polyprenyl synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668286|ref|ZP_06489361.1| polyprenyl synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 291 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 1/209 (0%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L+ T RL +A+RYA+LGG K++R LV +LF A+E IH Sbjct: 17 LEAGLPSATHAPQRLHAAMRYAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIH 76 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ T + + Sbjct: 77 AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAAASTSAELRVG 136 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ +D + + + +KTGAL+ A GA+ A+ Sbjct: 137 WMQSLATAAGAAGMCGGQALDMDATGQLQPLQDLQRMHALKTGALIRAAVRMGALTGGAA 196 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++++RL F + LG+ FQ+ DD+LD E Sbjct: 197 ADDQQRLGAFADALGLAFQVRDDILDVES 225 >gi|254488187|ref|ZP_05101392.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101] gi|214045056|gb|EEB85694.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101] Length = 332 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 16/232 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 + L + ++T++ D M ++H R+ + + GGK++R L Sbjct: 11 DRMAEYLAVDMAAVNTLIRD-------RMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAA 63 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 64 AHLCGYDGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGD 121 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L +F++++ +N+R +LS +G + Q+ Q+ DE+ + Sbjct: 122 YLFARSFQLMTET-----NNMRVLAILSNASATIAEGEVL-QLTAAQNLATDESVYLQVV 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT AL A E G ++A A + + L FG+ LGI FQ+ DDLLD + D Sbjct: 176 RGKTAALFSAATEVGGVIAGAPDAQVQALFDFGDALGIAFQIVDDLLDYQGD 227 >gi|306813113|ref|ZP_07447306.1| geranyltranstransferase [Escherichia coli NC101] gi|331645594|ref|ZP_08346698.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli M605] gi|331656475|ref|ZP_08357437.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA206] gi|331681814|ref|ZP_08382447.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H299] gi|305853876|gb|EFM54315.1| geranyltranstransferase [Escherichia coli NC101] gi|324010099|gb|EGB79318.1| polyprenyl synthetase [Escherichia coli MS 57-2] gi|331045756|gb|EGI17882.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli M605] gi|331054723|gb|EGI26732.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA206] gi|331081016|gb|EGI52181.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H299] Length = 299 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|324114640|gb|EGC08608.1| polyprenyl synthetase [Escherichia fergusonii B253] Length = 299 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|192361220|ref|YP_001981260.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107] gi|190687385|gb|ACE85063.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107] Length = 320 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 11/218 (5%) Query: 21 DDLLLQTASHMQTQHND-RLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 DD + H+D L+ I + L GGK++R LV A L + A Sbjct: 10 DDFAAVNQLIIDQLHSDVGLVENIGHYLVEAGGKRLRPLLVMLAAKSLGYTGKQHLDLAA 69 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 IE IH +L+HDD+ M +RRG+PT + Q+ +++ G+ L + AF+++ + + Sbjct: 70 IIEFIHTATLLHDDVVDM--SQLRRGRPTANAQWGNAPSVLVGDFLYSRAFQMMVAIGS- 126 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 + +LS T N +G + Q+++ +D + E F + KT L ACE G Sbjct: 127 ----MDVMAILSDTTNTIAEGEV-QQLVNAKDPNVTEENYFQVIDKKTAILFSAACEVGG 181 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++A A+ ++E LR +G ++GI FQL DD LD D Sbjct: 182 VIAGANTRQREALRHYGSHVGIAFQLVDDALDYTGDAA 219 >gi|15599238|ref|NP_252732.1| geranyltranstransferase [Pseudomonas aeruginosa PAO1] gi|107103557|ref|ZP_01367475.1| hypothetical protein PaerPA_01004627 [Pseudomonas aeruginosa PACS2] gi|218889676|ref|YP_002438540.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58] gi|9950239|gb|AAG07430.1|AE004821_3 geranyltranstransferase [Pseudomonas aeruginosa PAO1] gi|218769899|emb|CAW25660.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58] Length = 295 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 10/236 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + R+D LD L + +Q RL A+RY+++ GGK++R L Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL Sbjct: 57 ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 AFE+++ + +++ ML+ G GM+GGQ +D+ +D+ + ++ Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ + GA+ + A L + E +G+ FQ+ DD+LD E D Sbjct: 177 HRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTA 232 >gi|114797210|ref|YP_760540.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444] gi|114737384|gb|ABI75509.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444] Length = 295 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 95/234 (40%), Positives = 144/234 (61%), Gaps = 8/234 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 +L E + ++ LD L+ + L+ A+R+A L GK++R F V E Sbjct: 3 NFEQRLTEVADKVTVALDQLIPPASGP-----EANLMRAMRHAALANGKRMRPFFVLETG 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 ++F + + LR AA+ECIHCYSL+HDDLP MD+ RRG+PTVH +DE TA++AG+ Sbjct: 58 AMFGASEKSLLRTAAALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAFDEATAVLAGDA 117 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 LLT AF+I++S +T +R L+ L G +GM+GGQM+D+ +E D + + Sbjct: 118 LLTLAFKILASSETHDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPRDLNTITRM 177 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 Q++KTGAL+ +A E+G I+ HA + E+ L F +LG+ +Q+ADD+LD E D Sbjct: 178 QRLKTGALISYALEAGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGDE 231 >gi|28867927|ref|NP_790546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str. DC3000] gi|213969291|ref|ZP_03397429.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1] gi|301381795|ref|ZP_07230213.1| geranyltranstransferase [Pseudomonas syringae pv. tomato Max13] gi|302061005|ref|ZP_07252546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato K40] gi|302130543|ref|ZP_07256533.1| geranyltranstransferase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851163|gb|AAO54241.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str. DC3000] gi|213925969|gb|EEB59526.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1] Length = 295 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 78/241 (32%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ L+ L + + RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPELS-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P ++ R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLSSRNAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|299139494|ref|ZP_07032668.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8] gi|298598422|gb|EFI54586.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8] Length = 324 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 87/270 (32%), Positives = 131/270 (48%), Gaps = 39/270 (14%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + S L+ + D L+ LL T + A+R++ GGK++R L Sbjct: 1 MTIDVQSILKTGAAITDAALERLLP-----AATIEPYSIHRAMRHSTFAGGKRLRPILCM 55 Query: 60 ECASLFN-------------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 E A + + + AA+E +H YSLIHDDLP++DN +RRG+PT Sbjct: 56 EAAKMVASTDFYPPEEAAPAGHPEGVANLAAALEMLHTYSLIHDDLPALDNDDLRRGQPT 115 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL---------- 156 H+ + E TAI+AG+ L T AF+ I+S + + +SL+ G+ Sbjct: 116 CHVVFGEATAILAGDALQTLAFQTIASLPAPPEAVVAILRKISLSIGTGIGRWGDHDTGI 175 Query: 157 -QGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMA----HASQNEKER 209 GM+GGQ++DI+ E V I + KTGAL+ + +GAI + ER Sbjct: 176 APGMIGGQVVDIESEGTKPTPDLVEAIHRAKTGALITVSIVAGAIYGSSRHGLPSSYHER 235 Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236 +R FGE G+ FQ+ DD+LD E+L K Sbjct: 236 IRTFGEKAGLAFQIVDDVLDMTQSSEELGK 265 >gi|296447264|ref|ZP_06889193.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b] gi|296255226|gb|EFH02324.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b] Length = 306 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 108/244 (44%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 + +L E + LD LL + + RLL A+RY AL GGK++R FL E Sbjct: 3 DQDFRRRLDEAAAATQATLDALLAPSPLEGEIARPARLLEAMRYVALGGGKRLRPFLALE 62 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A LF V +A R AAIE IHCYSL HDDLP+MD+ +RRG+PT H +DE TAI+AG Sbjct: 63 SARLFGVCGESAARAAAAIEMIHCYSLAHDDLPAMDDDDLRRGRPTAHKAFDEATAILAG 122 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQ 176 +GLLTYAF++++ P T IR++L+L+L GL GM+GGQ LD++ E + + + Sbjct: 123 DGLLTYAFDVLADPATHADPLIRARLVLALARAAGLGGMVGGQALDLEAEKAAAPLTQEE 182 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233 +Q MKTGAL+ + GAI+ AS L +G+ LG FQ+ADD+LD E D Sbjct: 183 TLRLQAMKTGALLRVCVDFGAILGGASAEVAAALGRYGDALGAAFQIADDILDAEGDEAA 242 Query: 234 LPKK 237 L K+ Sbjct: 243 LGKR 246 >gi|107026831|ref|YP_624342.1| polyprenyl synthetase [Burkholderia cenocepacia AU 1054] gi|116691975|ref|YP_837508.1| polyprenyl synthetase [Burkholderia cenocepacia HI2424] gi|170736031|ref|YP_001777291.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3] gi|105896205|gb|ABF79369.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia AU 1054] gi|116649975|gb|ABK10615.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia HI2424] gi|169818219|gb|ACA92801.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3] Length = 294 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 117/235 (49%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L +T +L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----AETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ + L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVALTDAEA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSA 231 >gi|82542909|ref|YP_406856.1| geranyltranstransferase [Shigella boydii Sb227] gi|81244320|gb|ABB65028.1| geranyltranstransferase [Shigella boydii Sb227] gi|320186050|gb|EFW60795.1| geranyltranstransferase [Shigella flexneri CDC 796-83] gi|332098531|gb|EGJ03497.1| geranyltranstransferase [Shigella boydii 3594-74] Length = 299 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|116254354|ref|YP_770192.1| geranyltranstransferase [Rhizobium leguminosarum bv. viciae 3841] gi|115259002|emb|CAK10111.1| putative geranyltranstransferase [Rhizobium leguminosarum bv. viciae 3841] Length = 304 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 116/236 (49%), Positives = 164/236 (69%), Gaps = 3/236 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++L+ N++ I+ +LD LL +A + + L A+ YA+L GGK++R FLV E Sbjct: 6 DTFETRLKNNARDIEALLDALLSPSAFSDEIARPETLRDAMHYAVLNGGKRLRPFLVVES 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+L + ALRVGAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TAI+AG+ Sbjct: 66 AALLGGDAEAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGD 125 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179 LLTYAF+II++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + Sbjct: 126 SLLTYAFDIIAAPETTLADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 185 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GA+++ + ++ RLR FGE +G+ FQLADD+LD D Sbjct: 186 LQAMKTGALIRFACEAGAVISGSLAEDRRRLRAFGEKIGLAFQLADDILDLTSDAA 241 >gi|323976098|gb|EGB71191.1| polyprenyl synthetase [Escherichia coli TW10509] Length = 299 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLNALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|74316898|ref|YP_314638.1| farnesyl-diphosphate synthase [Thiobacillus denitrificans ATCC 25259] gi|74056393|gb|AAZ96833.1| polyprenyl synthetase [Thiobacillus denitrificans ATCC 25259] Length = 296 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 127/235 (54%), Gaps = 8/235 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 M + Q RI+ +L + L + RL A+RYA+LGG K++R L Sbjct: 1 MMSDFSAWTQACQARIEHVLAERLPPSDIA-----PKRLHEAMRYAVLGGGKRVRPLLAF 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + AA+E IH YSL+HDD+P+MD+ +RRGKPTVH+++DE TA++ Sbjct: 56 AAGDVTGAAVEQVQHAAAAVELIHAYSLVHDDMPAMDDDALRRGKPTVHVEFDEPTALLV 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQV 177 G+ L + AF+I++SP + + ++ L G +GM GGQ +D+ + + +D T++ Sbjct: 116 GDALQSLAFDILASPGLAQAASTQLAMVQLLARASGSRGMAGGQAIDLANVGKSLDLTEL 175 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ + GA S+ + L + + +G+ FQ+ DD+LD E Sbjct: 176 EFMHIHKTGALIRASVLLGAECGTLSEPARTALDHYAKCIGLAFQVVDDVLDAEA 230 >gi|254253601|ref|ZP_04946918.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158] gi|124898246|gb|EAY70089.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158] Length = 294 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 79/235 (33%), Positives = 117/235 (49%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L ++ RL A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----AESAVPTRLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181 + AF ++ L ++ L+ L G GM GGQ +D+ I Q+ + Sbjct: 118 QSQAFVALTDADA-LSPVQQAALVRELALASGSLGMAGGQAIDLASVGIKLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S + L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGETPSADTMAALDVYAGAVGLAFQVVDDILDVTTDSA 231 >gi|157155867|ref|YP_001461603.1| geranyltranstransferase [Escherichia coli E24377A] gi|157159942|ref|YP_001457260.1| geranyltranstransferase [Escherichia coli HS] gi|193065191|ref|ZP_03046264.1| geranyltranstransferase [Escherichia coli E22] gi|193068605|ref|ZP_03049566.1| geranyltranstransferase [Escherichia coli E110019] gi|194428795|ref|ZP_03061330.1| geranyltranstransferase [Escherichia coli B171] gi|218552984|ref|YP_002385897.1| geranyltranstransferase [Escherichia coli IAI1] gi|218693881|ref|YP_002401548.1| geranyltranstransferase [Escherichia coli 55989] gi|260842619|ref|YP_003220397.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009] gi|260853641|ref|YP_003227532.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368] gi|260866579|ref|YP_003232981.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128] gi|300818254|ref|ZP_07098465.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300820340|ref|ZP_07100492.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300903314|ref|ZP_07121242.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300924142|ref|ZP_07140134.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|301301569|ref|ZP_07207704.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|301330717|ref|ZP_07223319.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|307312204|ref|ZP_07591840.1| Polyprenyl synthetase [Escherichia coli W] gi|331666770|ref|ZP_08367644.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA271] gi|331676088|ref|ZP_08376800.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H591] gi|157065622|gb|ABV04877.1| geranyltranstransferase [Escherichia coli HS] gi|157077897|gb|ABV17605.1| geranyltranstransferase [Escherichia coli E24377A] gi|192927165|gb|EDV81786.1| geranyltranstransferase [Escherichia coli E22] gi|192957968|gb|EDV88410.1| geranyltranstransferase [Escherichia coli E110019] gi|194413098|gb|EDX29385.1| geranyltranstransferase [Escherichia coli B171] gi|218350613|emb|CAU96305.1| geranyltranstransferase [Escherichia coli 55989] gi|218359752|emb|CAQ97293.1| geranyltranstransferase [Escherichia coli IAI1] gi|257752290|dbj|BAI23792.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368] gi|257757766|dbj|BAI29263.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009] gi|257762935|dbj|BAI34430.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128] gi|300404609|gb|EFJ88147.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300419595|gb|EFK02906.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|300527125|gb|EFK48194.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300529145|gb|EFK50207.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300843066|gb|EFK70826.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|300843378|gb|EFK71138.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|306907706|gb|EFN38208.1| Polyprenyl synthetase [Escherichia coli W] gi|315059698|gb|ADT74025.1| geranyltranstransferase [Escherichia coli W] gi|315256246|gb|EFU36214.1| polyprenyl synthetase [Escherichia coli MS 85-1] gi|323152111|gb|EFZ38404.1| geranyltranstransferase [Escherichia coli EPECa14] gi|323160472|gb|EFZ46420.1| geranyltranstransferase [Escherichia coli E128010] gi|323178316|gb|EFZ63894.1| geranyltranstransferase [Escherichia coli 1180] gi|323379736|gb|ADX52004.1| Polyprenyl synthetase [Escherichia coli KO11] gi|323945322|gb|EGB41378.1| polyprenyl synthetase [Escherichia coli H120] gi|324116905|gb|EGC10818.1| polyprenyl synthetase [Escherichia coli E1167] gi|331065994|gb|EGI37878.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA271] gi|331076146|gb|EGI47428.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H591] gi|333010863|gb|EGK30289.1| geranyltranstransferase [Shigella flexneri K-272] gi|333021362|gb|EGK40615.1| geranyltranstransferase [Shigella flexneri K-227] Length = 299 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|259503553|ref|ZP_05746455.1| geranyltranstransferase [Lactobacillus antri DSM 16041] gi|259168466|gb|EEW52961.1| geranyltranstransferase [Lactobacillus antri DSM 16041] Length = 291 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 73/225 (32%), Positives = 121/225 (53%), Gaps = 7/225 (3%) Query: 13 SKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHL 70 ++ ++ + D + A+H+ + L +++RY+ + GGK++R L + Sbjct: 2 AESLEQLKDRVTAYLATHLANDIDQPTLAASMRYSTMAGGKRLRPTLTLATVEILGGQLD 61 Query: 71 -TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +R A+E +H YSLIHDDLP+MDN +RRG PT H ++ A +AG+GLLT AF+ Sbjct: 62 ADVMRAATALELLHTYSLIHDDLPAMDNDDLRRGAPTNHRKFGAGMATLAGDGLLTLAFQ 121 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187 ++ L ++S+L L L G GM+ GQ DI+ + Q+ + + KTGA Sbjct: 122 WVTD--NHLPAAVKSRLALELAKAAGPAGMVAGQARDIEGTGQQLSLDQLRYLHRQKTGA 179 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ +A +G I+ + + L FG + G+ FQ+ DDL+D Sbjct: 180 LLRYAVLAGGIITAQPEKVQRLLAQFGASYGLAFQIYDDLMDVVG 224 >gi|110640682|ref|YP_668410.1| geranyltranstransferase [Escherichia coli 536] gi|191173497|ref|ZP_03035024.1| geranyltranstransferase [Escherichia coli F11] gi|300997392|ref|ZP_07181732.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|110342274|gb|ABG68511.1| geranyltranstransferase [Escherichia coli 536] gi|190906206|gb|EDV65818.1| geranyltranstransferase [Escherichia coli F11] gi|300304211|gb|EFJ58731.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|324010681|gb|EGB79900.1| polyprenyl synthetase [Escherichia coli MS 60-1] Length = 299 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|83716251|ref|YP_438813.1| geranyltranstransferase [Burkholderia thailandensis E264] gi|167577162|ref|ZP_02370036.1| geranyltranstransferase [Burkholderia thailandensis TXDOH] gi|167615332|ref|ZP_02383967.1| geranyltranstransferase [Burkholderia thailandensis Bt4] gi|257141897|ref|ZP_05590159.1| geranyltranstransferase [Burkholderia thailandensis E264] gi|83650076|gb|ABC34140.1| geranyltranstransferase [Burkholderia thailandensis E264] Length = 294 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 75/235 (31%), Positives = 120/235 (51%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ +R++T L L +T +L A+RYA+LGG K++R L Sbjct: 3 FDQWMRSVLERVETALGHYLP-----AETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + +A+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGASEAALNAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L + ++ L+ L G GM GGQ +D+ + + + Sbjct: 118 QSQAFVALTDAAA-LPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ + GA+ S + L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRASVRMGALAGETPSDDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231 >gi|323344513|ref|ZP_08084738.1| polyprenyl synthetase [Prevotella oralis ATCC 33269] gi|323094640|gb|EFZ37216.1| polyprenyl synthetase [Prevotella oralis ATCC 33269] Length = 323 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 12/223 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 D IL+ + + L I+Y L LGGK+IR L+ +L+ + + L Sbjct: 4 DEILNIFNEYLDNLQYARKPHTLYEPIKYVLSLGGKRIRPTLMLLAYNLYKDDPQSILSS 63 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AIE H Y+L+HDDL MDN IRRG+PTVH ++D TAI++G+ +L A+ ++ Sbjct: 64 ACAIETYHNYTLLHDDL--MDNAAIRRGRPTVHKKWDANTAILSGDSMLVLAYHYMAQC- 120 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 D + + ++ L L + GQ LD+ E + E + + ++KT L+ + Sbjct: 121 ----DGSKLKEVIDLFTETAL-EIGEGQQLDMDFETRNDVTEAEYIEMIRLKTSVLLACS 175 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GAI+A +S + + L FGE +G+ FQL DD LD D Sbjct: 176 LKIGAILAGSSAEDADYLYRFGEQIGLAFQLQDDFLDVYGDTK 218 >gi|28378303|ref|NP_785195.1| geranyltranstransferase [Lactobacillus plantarum WCFS1] gi|254556510|ref|YP_003062927.1| geranyltranstransferase [Lactobacillus plantarum JDM1] gi|28271138|emb|CAD64043.1| geranyltranstransferase [Lactobacillus plantarum WCFS1] gi|254045437|gb|ACT62230.1| geranyltranstransferase [Lactobacillus plantarum JDM1] Length = 296 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 13/237 (5%) Query: 1 MNGGLPSKLQENSK-RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLV 58 MN L ++ + + +I+ LD+ L + L A+RY+ L GGK++R L Sbjct: 1 MNKQLLTEFESKWRPQINQYLDEQLQACSD------QSTLTDAMRYSVLAGGKRLRPLLT 54 Query: 59 TECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 F++ A LR A+E +H YSLIHDDLP+MDN +RRG+PT H+++ E AI Sbjct: 55 LAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMDNDQLRRGEPTNHVKFGEDVAI 114 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175 +AG+ L FE I+ + L +I + L+L G +GM+ GQ+ D+ + + Sbjct: 115 LAGDALQPLTFEWIAD--SGLPASIVANQTLALAQATGPRGMVAGQVADVLGAGQHLALP 172 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + + KTGAL+ +A ++G I A +E L + + G+ FQ+ DD+LD Sbjct: 173 ALQQLHREKTGALIHYAVQAGLIQAQVQPTVQELLLQYADAYGLAFQIYDDILDVTS 229 >gi|170767787|ref|ZP_02902240.1| geranyltranstransferase [Escherichia albertii TW07627] gi|170123275|gb|EDS92206.1| geranyltranstransferase [Escherichia albertii TW07627] Length = 299 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 88/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYAIG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 QMFGVSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I+S ++ D R ++ L + G+ GM GGQ LD+ E + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRLAMISELANASGIAGMCGGQALDLDAEGKQVPLEALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGEKGRNALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|205351734|ref|YP_002225535.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855904|ref|YP_002242555.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205271515|emb|CAR36333.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707707|emb|CAR31991.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326626769|gb|EGE33112.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 299 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 91/242 (37%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ + + L + N ++ A++Y ALLGGK++R FLV Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+ Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I+S P ++ D R ++ L + G+ GM GGQ LD+ E I + Sbjct: 117 LQTLAFAILSDAPMPEVTDRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|16759400|ref|NP_455017.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142828|ref|NP_806170.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052895|ref|ZP_03345773.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427858|ref|ZP_03360608.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213586122|ref|ZP_03367948.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213613222|ref|ZP_03371048.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647259|ref|ZP_03377312.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855375|ref|ZP_03383615.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825066|ref|ZP_06544418.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25315864|pir||AG0554 geranyltranstransferase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501691|emb|CAD08879.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi] gi|29138460|gb|AAO70030.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 299 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 92/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ + + L + N ++ A++Y ALLGGK++R FLV Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+ Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF IIS P ++ D R ++ L + G+ GM GGQ LD+ E I + Sbjct: 117 LQTLAFTIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|237749332|ref|ZP_04579812.1| geranyltranstransferase [Oxalobacter formigenes OXCC13] gi|229380694|gb|EEO30785.1| geranyltranstransferase [Oxalobacter formigenes OXCC13] Length = 297 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 71/233 (30%), Positives = 121/233 (51%), Gaps = 3/233 (1%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 +P+ + + + + +++ L + + L ++RYA+L GGK+IR LV Sbjct: 3 VPASFDDWMRNVQSTMEESLSSLLPEGKLASSS-LHESMRYAVLDGGKRIRPLLVFATGY 61 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF+ L R AA+E IH YSL+HDD+P MDN +RRGKPTVH+++ E TA++AG+ L Sbjct: 62 LFDAEKLALARAAAAVEMIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGEATALLAGDAL 121 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 AF ++S+ + + +LS L + + ++ + ++ Sbjct: 122 QAQAFVVLSNQQCDPVLTVEMMRLLSEAAGAAGMCGGQAIDLASVGKSLTVNELENMHRL 181 Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL+ + GA + ++ EK L + + +G+ FQ+ DD+LD D Sbjct: 182 KTGALLTASVFLGAYCSKIPTEQEKNALNAYAKAIGLAFQVVDDILDVTADSA 234 >gi|206562765|ref|YP_002233528.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315] gi|198038805|emb|CAR54767.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315] Length = 294 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L +T +L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----AETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVALTDADA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGETPSTETMAALDVYAGAVGLAFQVVDDILDVTTDSA 231 >gi|67906634|gb|AAY82729.1| predicted geranyltranstransferase [uncultured bacterium eBACmed86H08] Length = 287 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 85/222 (38%), Positives = 137/222 (61%), Gaps = 4/222 (1%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 K+I+ I D+ + ++ Q L++++ Y L GGKKIRS ++ + +F+V + Sbjct: 3 KKINKIGKDINKFLKNFLKKQKRTELITSMNYGLFPGGKKIRSKIIIDVGKIFSVPYHHL 62 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 +RVGAA+ECIH YSLIHDDLP MDN +RRGK + H ++ E TA++AGN LLT AFEI+S Sbjct: 63 IRVGAAVECIHAYSLIHDDLPCMDNDDLRRGKLSTHKKFGESTAVLAGNSLLTLAFEILS 122 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMC 190 ++ + +++L+ SL++ G G+ GGQ LD+ E + + ++ +Q KTG L Sbjct: 123 EKNFKINETKKNKLINSLSNTSGHLGIAGGQYLDLNFEKKRVSKKKIIDMQLNKTGKLFS 182 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 F+ + I+A+ S + + G ++G++FQ+ DD LD Sbjct: 183 FSTIAPLIIANKSAK-INQFKRIGLDIGLLFQIVDDFLDYSG 223 >gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5] gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5] Length = 295 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 77/241 (31%), Positives = 128/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + + R+D + L + + RL A+RY+++ GGK++R L Sbjct: 2 ITAYQASSQARVDAAMHTLFTAPSPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGKPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + P + IR +++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFSALLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A + E + L+ + + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|317484629|ref|ZP_07943532.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6] gi|316924103|gb|EFV45286.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6] Length = 302 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 85/238 (35%), Positives = 132/238 (55%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + + L E +++ L L RL A+ Y+LL GGK++R L Sbjct: 7 SQQVKTILAERGAQVEAYLQHCLD------AIPMQGRLKEAMYYSLLAGGKRLRPVLCLS 60 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A+LF ++ + A++E IH YSLIHDDLP+MD+ +RRG+P+ H +DE TAI+AG Sbjct: 61 TAALFGLSAEAVMPFAASLEMIHTYSLIHDDLPAMDDDDLRRGRPSCHKAFDEATAILAG 120 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + LLT AF ++S L + + S++ G GM+GGQ+LD+ + + Sbjct: 121 DALLTDAFGFMASTVKDLPAGRVLEALASVSSAAGSAGMVGGQILDMDCTGKTNVPLETL 180 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGA+ AC SG ++A AS+++ LR +GE LG+ FQ+ DD+LD D Sbjct: 181 QTLHALKTGAMFRVACVSGGLLAGASESDIASLRAYGEALGVTFQIVDDILDETADTA 238 >gi|91793921|ref|YP_563572.1| polyprenyl synthetase [Shewanella denitrificans OS217] gi|91715923|gb|ABE55849.1| farnesyl-diphosphate synthase [Shewanella denitrificans OS217] Length = 293 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 92/238 (38%), Positives = 131/238 (55%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L ++ +R+D +L + L Q L A+ Y AL+GGK+IR FLV Sbjct: 2 LAQAIELYQQRVDIVLKNKLEQLD-----DCAPELKDAMTYGALMGGKRIRPFLVYAIGQ 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + V AAIECIH YSLIHDDLP+MD+ +RRGKPTVHI ++E AI+AG+ L Sbjct: 57 MLKVPLEKLDNAAAAIECIHAYSLIHDDLPAMDDDDLRRGKPTVHIAFNEAQAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 + AFE+++ + + ++ L G QGM GGQ +D+ ++ ID Q+ + Sbjct: 117 QSLAFELMTESQADTSPTQQLHMVKVLAKAAGYQGMCGGQAIDLAATNKAIDLAQLTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 KTGAL+ A E I+A AS E+ L F LG+ FQ+ DD+LD ++L K Sbjct: 177 NKKTGALISCAVELAIILADASPVERAHLAQFSHALGLAFQVQDDILDVTVSTQELGK 234 >gi|15800151|ref|NP_286163.1| geranyltranstransferase [Escherichia coli O157:H7 EDL933] gi|15829729|ref|NP_308502.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai] gi|168749882|ref|ZP_02774904.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113] gi|168756962|ref|ZP_02781969.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401] gi|168761626|ref|ZP_02786633.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501] gi|168768371|ref|ZP_02793378.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486] gi|168776274|ref|ZP_02801281.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196] gi|168783286|ref|ZP_02808293.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076] gi|168786267|ref|ZP_02811274.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869] gi|168800303|ref|ZP_02825310.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508] gi|195938512|ref|ZP_03083894.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4024] gi|208807604|ref|ZP_03249941.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206] gi|208815942|ref|ZP_03257121.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045] gi|208822955|ref|ZP_03263273.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042] gi|209397720|ref|YP_002269066.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115] gi|217326244|ref|ZP_03442328.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588] gi|254791605|ref|YP_003076442.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359] gi|261223902|ref|ZP_05938183.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK2000] gi|261256384|ref|ZP_05948917.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK966] gi|291281328|ref|YP_003498146.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615] gi|12513277|gb|AAG54771.1|AE005221_8 geranyltranstransferase (farnesyldiphosphate synthase) [Escherichia coli O157:H7 str. EDL933] gi|13359932|dbj|BAB33898.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai] gi|187768276|gb|EDU32120.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196] gi|188015849|gb|EDU53971.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113] gi|188999339|gb|EDU68325.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076] gi|189356028|gb|EDU74447.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401] gi|189362401|gb|EDU80820.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486] gi|189367958|gb|EDU86374.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501] gi|189373540|gb|EDU91956.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869] gi|189377422|gb|EDU95838.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508] gi|208727405|gb|EDZ77006.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206] gi|208732590|gb|EDZ81278.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045] gi|208737148|gb|EDZ84832.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042] gi|209159120|gb|ACI36553.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115] gi|209744014|gb|ACI70314.1| geranyltranstransferase [Escherichia coli] gi|209744016|gb|ACI70315.1| geranyltranstransferase [Escherichia coli] gi|209744018|gb|ACI70316.1| geranyltranstransferase [Escherichia coli] gi|209744020|gb|ACI70317.1| geranyltranstransferase [Escherichia coli] gi|209744022|gb|ACI70318.1| geranyltranstransferase [Escherichia coli] gi|217322465|gb|EEC30889.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588] gi|254591005|gb|ACT70366.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359] gi|290761201|gb|ADD55162.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615] gi|320192835|gb|EFW67475.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC1212] gi|320638415|gb|EFX08129.1| geranyltranstransferase [Escherichia coli O157:H7 str. G5101] gi|320643795|gb|EFX12918.1| geranyltranstransferase [Escherichia coli O157:H- str. 493-89] gi|320649146|gb|EFX17724.1| geranyltranstransferase [Escherichia coli O157:H- str. H 2687] gi|320656039|gb|EFX23955.1| geranyltranstransferase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661189|gb|EFX28620.1| geranyltranstransferase [Escherichia coli O55:H7 str. USDA 5905] gi|320665165|gb|EFX32258.1| geranyltranstransferase [Escherichia coli O157:H7 str. LSU-61] gi|326341183|gb|EGD64975.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1044] gi|326346042|gb|EGD69781.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1125] Length = 299 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|254248780|ref|ZP_04942100.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia PC184] gi|124875281|gb|EAY65271.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia PC184] Length = 294 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L +T +L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----AETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVALTDADA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSA 231 >gi|114569399|ref|YP_756079.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10] gi|114339861|gb|ABI65141.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10] Length = 295 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 96/235 (40%), Positives = 139/235 (59%), Gaps = 8/235 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 +L E++ R+ LD LL + L SA+RYA LG GK++R FL E Sbjct: 2 ENFEQRLNEHADRVTVALDALLPRAEGP-----EAHLNSAMRYAALGPGKRLRPFLTIEA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L + + LR A+ECIH YSLIHDDLP MD+ +RRG+PTVH YDE TA++AG+ Sbjct: 57 GHLVHADERGVLRAACALECIHAYSLIHDDLPCMDDDDMRRGRPTVHKAYDEATAVLAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 GL + A+EI++ P T + ++R++L+ L+ G GM+GGQM+DI+ E D + V Sbjct: 117 GLQSIAYEILAHPDTHQRGSVRARLVERLSRASGPYGMVGGQMIDIRAETEQFDISVVTR 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + +MKTGAL+ +A E+ I+ + L F +LG+ +Q+ DDLLD D Sbjct: 177 MHRMKTGALISYAVEAATILKDVDDPVRRALEGFAHDLGLAYQITDDLLDATGDE 231 >gi|257455692|ref|ZP_05620921.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60] gi|257446975|gb|EEV21989.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60] Length = 319 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 81/233 (34%), Positives = 126/233 (54%), Gaps = 16/233 (6%) Query: 18 TILDDLLLQTASHMQT-QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA--- 72 ++D L +++Q + L A YA+ GGK++R LV + ++ A Sbjct: 27 QVIDQLESDITAYLQACKLPSPLHEASLYAMTNGGKRVRPLLVAATFATVKTDNSLANPS 86 Query: 73 -------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 R A+EC+H YSL+HDDLP MD+ +RRG+PT HI Y E A++AG+ L T Sbjct: 87 HQLSNDVRRAMMAVECLHGYSLVHDDLPCMDDDALRRGRPTTHIAYGEAAAMLAGDVLQT 146 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183 AFE ++ T +N LS T + M+ GQMLD+ E + +T++ I + Sbjct: 147 LAFEALT--HTYFGENSEFATPLSATFAPRARRMVMGQMLDLNGEHQQLSQTELEAIHRD 204 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTGAL+ + GAI A+A+ +E++ L F + +G+ FQ+ DD+LD D + Sbjct: 205 KTGALIEASVLMGAICANATDSERQALSSFAQQIGLAFQVQDDILDVTADTEQ 257 >gi|157146963|ref|YP_001454282.1| geranyltranstransferase [Citrobacter koseri ATCC BAA-895] gi|157084168|gb|ABV13846.1| hypothetical protein CKO_02740 [Citrobacter koseri ATCC BAA-895] Length = 299 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 89/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ ++ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFSQQLQACVEQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 RMFGVSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF IIS P ++ D R ++ L + G+ GM GGQ LD+ E + + Sbjct: 117 LQTLAFSIISDAPMPEVADRDRIAMISELANASGIAGMCGGQALDLAAEGKQVPLEALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGENGRNALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|330812001|ref|YP_004356463.1| geranyltranstransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380109|gb|AEA71459.1| geranyltranstransferase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 295 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 76/239 (31%), Positives = 128/239 (53%), Gaps = 13/239 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 + + R++ L+ L + + RL A+RY+++ GGK++R L Sbjct: 4 AYQASSQARVNAALETLFSAPSPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACEAL 58 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A A+E IH YSL+HDDLP+MD+ +RRG+PT H Q+DE AI+AG+GL + Sbjct: 59 GGQAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQS 118 Query: 126 YAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182 AF + P + +R ++ +L G GM+GGQ +D+ +D++ + + + Sbjct: 119 LAFTALLDPALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHR 178 Query: 183 MKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 KTGAL+ + GA+ + A+ + + L+ + +G+ FQ+ DD+LD E D L K+ Sbjct: 179 HKTGALIEASVRLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKR 237 >gi|194432565|ref|ZP_03064851.1| geranyltranstransferase [Shigella dysenteriae 1012] gi|194419126|gb|EDX35209.1| geranyltranstransferase [Shigella dysenteriae 1012] gi|332086043|gb|EGI91207.1| geranyltranstransferase [Shigella dysenteriae 155-74] gi|332094575|gb|EGI99621.1| geranyltranstransferase [Shigella boydii 5216-82] Length = 299 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDSDMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|168240246|ref|ZP_02665178.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194445849|ref|YP_002039665.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450485|ref|YP_002044458.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|200390075|ref|ZP_03216686.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194404512|gb|ACF64734.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408789|gb|ACF69008.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|199602520|gb|EDZ01066.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205339956|gb|EDZ26720.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 299 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 92/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ + + L + N ++ A++Y ALLGGK++R FLV Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+ Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF IIS P ++ D R ++ L + G+ GM GGQ LD+ E I + Sbjct: 117 LQTLAFAIISDAPMPEVTDRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|254293553|ref|YP_003059576.1| polyprenyl synthetase [Hirschia baltica ATCC 49814] gi|254042084|gb|ACT58879.1| Polyprenyl synthetase [Hirschia baltica ATCC 49814] Length = 303 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 90/237 (37%), Positives = 141/237 (59%), Gaps = 9/237 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 L E + ++ +LD + +L+ A+R+ AL GGK++R F+ E Sbjct: 9 ASFEQSLAECADKVTVVLDKFIPSAIGP-----EAQLMRAMRHGALAGGKRLRPFITIEV 63 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 LF+ + LR +A+EC+H YSL+HDDLP MD+ +RRG PTVH +DE TA++AG+ Sbjct: 64 GRLFDAPEKSLLRAASALECVHAYSLVHDDLPCMDDDDLRRGLPTVHKAFDEATAVLAGD 123 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VF 178 L AFEI+++ +T +R +L+ L + G +GM+GGQM+D+ F D+ + Sbjct: 124 ALQALAFEILANTETHGDAGVRCKLIEVLALSSGARGMVGGQMIDMAPSFDDKDALNILA 183 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q+MKTGAL+ A E GAI+ A+++E + L F +LG+ +Q+ DDLLD + D Sbjct: 184 RMQRMKTGALISCAAEFGAIIGGANEHEHQALAGFTTDLGLAYQIKDDLLDVQGDEA 240 >gi|333008616|gb|EGK28084.1| geranyltranstransferase [Shigella flexneri VA-6] Length = 299 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P + + K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQFEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|297787795|pdb|3MZV|A Chain A, Crystal Structure Of A Decaprenyl Diphosphate Synthase From Rhodobacter Capsulatus gi|297787796|pdb|3MZV|B Chain B, Crystal Structure Of A Decaprenyl Diphosphate Synthase From Rhodobacter Capsulatus Length = 341 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 14/230 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L L E+ ++ ++ + + + + L+ A GGK++R L A Sbjct: 12 DRLAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEA------GGKRLRPMLTLAAA 65 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 66 RLVGYGGPFHVHLAATVEFIHTATLLHDDV--VDESRQRRGRPTANLLWDNKSSVLVGDY 123 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L +F++++ N+R +L+ + +G + Q+ Q+ E + + Sbjct: 124 LFARSFQLMTDTG-----NMRVMEILANASAVIAEGEVL-QLTAAQNLATTEDIYLRVIR 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT AL A E G I+ A +++ + L +G+ LGI FQ+ DDLLD Sbjct: 178 GKTAALFSAATEVGGIIGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGG 227 >gi|323938606|gb|EGB34855.1| polyprenyl synthetase [Escherichia coli E1520] Length = 299 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGCRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|84683979|ref|ZP_01011881.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84667732|gb|EAQ14200.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Rhodobacterales bacterium HTCC2654] Length = 331 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 115/229 (50%), Gaps = 16/229 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + L+++ ++D ++ + M ++H R+ + + GGK++R L A Sbjct: 13 LAAHLKDDLSQVDEMI-------RARMASEHAPRIPEVTAHLVDAGGKRLRPMLTLASAR 65 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + + A+E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L Sbjct: 66 LCGYEGGHHIHLATAVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 +F++++ D++R +LS +G + Q+ QD E F + + Sbjct: 124 FARSFQLMTEA-----DSLRVLQVLSNASATITEGEVL-QLTAAQDLGTTEDTYFKVVRG 177 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT AL A E G I+A S++ + L +G+ LGI FQ+ DDLLD Sbjct: 178 KTAALFAAATEVGGILAGVSEDRIKALHDYGDALGIAFQVVDDLLDFWG 226 >gi|226329091|ref|ZP_03804609.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198] gi|225202277|gb|EEG84631.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198] Length = 310 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 93/244 (38%), Positives = 128/244 (52%), Gaps = 13/244 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 KL +R+D L+ L + L A+ Y ALLGGK++R FLV Sbjct: 8 TDAFRHKLDSAHQRVDDALNQALSAL-----PFTDMPLGKAMHYGALLGGKRLRPFLVYA 62 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F V L AAIECIH YSLIHDDLP+MD+ +RRGKPT HI++ E AI+AG Sbjct: 63 VGEMFKVPALNLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGKPTCHIEFGEANAILAG 122 Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 + L AFEI++ +P + R ++ L GL GM GGQ LD +D+ ID + Sbjct: 123 DALQALAFEILAKNPMPDVAITDRVAMIAELATASGLAGMCGGQALDLEAEDKSIDLASL 182 Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDC---EED 233 I KTGAL+ A GA A + + L + ++G+ FQ+ DD+LD E+ Sbjct: 183 EKIHLHKTGALIRAAVRLGAFSAGSKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTEE 242 Query: 234 LPKK 237 K+ Sbjct: 243 TGKR 246 >gi|152979918|ref|YP_001352020.1| geranyltranstransferase [Janthinobacterium sp. Marseille] gi|151279995|gb|ABR88405.1| geranyltranstransferase [Janthinobacterium sp. Marseille] Length = 280 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 119/218 (54%), Gaps = 6/218 (2%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +L L Q RL A+ YA+L GGK++R LV +LF+ + R AA+E Sbjct: 2 ELALVQHLPPVAQTPARLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAVE 61 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSL+HDD+P MD+ +RRGKPTVH++YDE A++ G+ L + AF++++ L Sbjct: 62 MIHAYSLVHDDMPCMDDDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGG--LDP 119 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI 198 + ++ L G GM GGQ +D+ + ++ + ++KTGAL+ + GA+ Sbjct: 120 VRQLAMVRLLAKASGSLGMCGGQAIDLASVGLSLSLEELEQMHRLKTGALLRVSVLLGAL 179 Query: 199 MAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A S E + L + +G+ FQ+ DD+LD D Sbjct: 180 AGKALSAEETQALDSYAAAIGLAFQVVDDVLDATADSA 217 >gi|16763803|ref|NP_459418.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414422|ref|YP_151497.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161615389|ref|YP_001589354.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551766|ref|ZP_02345519.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992273|ref|ZP_02573371.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232396|ref|ZP_02657454.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237536|ref|ZP_02662594.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168261144|ref|ZP_02683117.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465513|ref|ZP_02699395.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194471326|ref|ZP_03077310.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737792|ref|YP_002113456.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248755|ref|YP_002145405.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264786|ref|ZP_03164860.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363342|ref|YP_002142979.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198246235|ref|YP_002214377.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204927283|ref|ZP_03218485.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|224582261|ref|YP_002636059.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911444|ref|ZP_04655281.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16418928|gb|AAL19377.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128679|gb|AAV78185.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161364753|gb|ABX68521.1| hypothetical protein SPAB_03160 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194457690|gb|EDX46529.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713294|gb|ACF92515.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631861|gb|EDX50381.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094819|emb|CAR60352.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212458|gb|ACH49855.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243041|gb|EDY25661.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289586|gb|EDY28949.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940751|gb|ACH78084.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204323948|gb|EDZ09143.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323424|gb|EDZ11263.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329490|gb|EDZ16254.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333490|gb|EDZ20254.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205349921|gb|EDZ36552.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224466788|gb|ACN44618.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245706|emb|CBG23502.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992135|gb|ACY87020.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157034|emb|CBW16517.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911456|dbj|BAJ35430.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225151|gb|EFX50212.1| Geranyltranstransferase farnesyldiphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322614703|gb|EFY11632.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618809|gb|EFY15697.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623516|gb|EFY20355.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629186|gb|EFY25965.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631906|gb|EFY28660.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637357|gb|EFY34059.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642042|gb|EFY38652.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647861|gb|EFY44336.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652539|gb|EFY48893.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653299|gb|EFY49632.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660552|gb|EFY56788.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664704|gb|EFY60897.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669243|gb|EFY65393.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670788|gb|EFY66921.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678973|gb|EFY75028.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682001|gb|EFY78026.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685170|gb|EFY81167.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323128742|gb|ADX16172.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194482|gb|EFZ79677.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196981|gb|EFZ82123.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203966|gb|EFZ88983.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206949|gb|EFZ91902.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210833|gb|EFZ95705.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214524|gb|EFZ99275.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223081|gb|EGA07424.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227030|gb|EGA11211.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230152|gb|EGA14272.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233890|gb|EGA17979.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238416|gb|EGA22474.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244104|gb|EGA28113.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246264|gb|EGA30247.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251890|gb|EGA35753.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257887|gb|EGA41566.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261100|gb|EGA44692.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264970|gb|EGA48469.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272533|gb|EGA55940.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622125|gb|EGE28470.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332987371|gb|AEF06354.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 299 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 92/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ + + L + N ++ A++Y ALLGGK++R FLV Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+ Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF IIS P ++ D R ++ L + G+ GM GGQ LD+ E I + Sbjct: 117 LQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|323965104|gb|EGB60563.1| polyprenyl synthetase [Escherichia coli M863] gi|327254743|gb|EGE66359.1| geranyltranstransferase [Escherichia coli STEC_7v] Length = 299 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+EC+H YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECVHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|308180453|ref|YP_003924581.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045944|gb|ADN98487.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 296 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 13/237 (5%) Query: 1 MNGGLPSKLQENSK-RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLV 58 MN L ++ + + +I+ LD+ L + L A+RY+ L GGK++R L Sbjct: 1 MNKQLLTEFESKWRPQINQYLDEQLQACSD------QSTLTDAMRYSVLAGGKRLRPLLT 54 Query: 59 TECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 F++ A LR A+E +H YSLIHDDLP+MDN +RRG+PT H+++ E AI Sbjct: 55 LAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMDNDQLRRGEPTNHVKFGEDVAI 114 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175 +AG+ L FE I+ + L +I + L+L G +GM+ GQ+ D+ + + Sbjct: 115 LAGDALQPLTFEWIAD--SGLPASIVANQTLALAQATGPRGMVAGQIADVLGAGQHLALP 172 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + + KTGAL+ +A ++G I A +E L + + G+ FQ+ DD+LD Sbjct: 173 ALQQLHREKTGALIHYAVQAGLIQAQVQPAVQELLLQYADAYGLAFQIYDDILDVTS 229 >gi|16128406|ref|NP_414955.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655] gi|74310990|ref|YP_309409.1| geranyltranstransferase [Shigella sonnei Ss046] gi|82775670|ref|YP_402017.1| geranyltranstransferase [Shigella dysenteriae Sd197] gi|89107291|ref|AP_001071.1| geranyltranstransferase [Escherichia coli str. K-12 substr. W3110] gi|170080007|ref|YP_001729327.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B] gi|170683582|ref|YP_001742558.1| geranyltranstransferase [Escherichia coli SMS-3-5] gi|187730884|ref|YP_001879130.1| geranyltranstransferase [Shigella boydii CDC 3083-94] gi|188492835|ref|ZP_03000105.1| geranyltranstransferase [Escherichia coli 53638] gi|191166720|ref|ZP_03028547.1| geranyltranstransferase [Escherichia coli B7A] gi|194438870|ref|ZP_03070955.1| geranyltranstransferase [Escherichia coli 101-1] gi|209917634|ref|YP_002291718.1| geranyltranstransferase [Escherichia coli SE11] gi|218698670|ref|YP_002406299.1| geranyltranstransferase [Escherichia coli IAI39] gi|218703704|ref|YP_002411223.1| geranyltranstransferase [Escherichia coli UMN026] gi|238899709|ref|YP_002925505.1| geranyltranstransferase [Escherichia coli BW2952] gi|253774594|ref|YP_003037425.1| geranyltranstransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160487|ref|YP_003043595.1| geranyltranstransferase [Escherichia coli B str. REL606] gi|256020388|ref|ZP_05434253.1| geranyltranstransferase [Shigella sp. D9] gi|256023962|ref|ZP_05437827.1| geranyltranstransferase [Escherichia sp. 4_1_40B] gi|293403541|ref|ZP_06647632.1| geranyltranstransferase [Escherichia coli FVEC1412] gi|293413676|ref|ZP_06656325.1| geranyltranstransferase [Escherichia coli B185] gi|297518956|ref|ZP_06937342.1| geranyltranstransferase [Escherichia coli OP50] gi|298379153|ref|ZP_06989034.1| geranyltranstransferase [Escherichia coli FVEC1302] gi|300900489|ref|ZP_07118656.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300918198|ref|ZP_07134805.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300930283|ref|ZP_07145696.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|300947928|ref|ZP_07162076.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300957986|ref|ZP_07170151.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|301022588|ref|ZP_07186460.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|301025692|ref|ZP_07189208.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|301647344|ref|ZP_07247156.1| polyprenyl synthetase [Escherichia coli MS 146-1] gi|307137064|ref|ZP_07496420.1| geranyltranstransferase [Escherichia coli H736] gi|309787014|ref|ZP_07681626.1| geranyltranstransferase [Shigella dysenteriae 1617] gi|309794853|ref|ZP_07689274.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|312970516|ref|ZP_07784697.1| geranyltranstransferase [Escherichia coli 1827-70] gi|331640938|ref|ZP_08342073.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H736] gi|331651356|ref|ZP_08352381.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli M718] gi|331661799|ref|ZP_08362722.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA143] gi|331671966|ref|ZP_08372762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA280] gi|332281567|ref|ZP_08393980.1| geranyltranstransferase [Shigella sp. D9] gi|124931|sp|P22939|ISPA_ECOLI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|46015527|pdb|1RQJ|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Risedronate gi|46015528|pdb|1RQJ|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Risedronate gi|216584|dbj|BAA00599.1| farnesyl diphosphate synthase [Escherichia coli] gi|1773105|gb|AAB40177.1| geranyltransperase [Escherichia coli] gi|1786623|gb|AAC73524.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655] gi|73854467|gb|AAZ87174.1| geranyltranstransferase [Shigella sonnei Ss046] gi|81239818|gb|ABB60528.1| geranyltranstransferase [Shigella dysenteriae Sd197] gi|85674561|dbj|BAE76201.1| geranyltranstransferase [Escherichia coli str. K12 substr. W3110] gi|169887842|gb|ACB01549.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B] gi|170521300|gb|ACB19478.1| geranyltranstransferase [Escherichia coli SMS-3-5] gi|187427876|gb|ACD07150.1| geranyltranstransferase [Shigella boydii CDC 3083-94] gi|188488034|gb|EDU63137.1| geranyltranstransferase [Escherichia coli 53638] gi|190903231|gb|EDV62953.1| geranyltranstransferase [Escherichia coli B7A] gi|194422164|gb|EDX38166.1| geranyltranstransferase [Escherichia coli 101-1] gi|209910893|dbj|BAG75967.1| geranyltranstransferase [Escherichia coli SE11] gi|218368656|emb|CAR16395.1| geranyltranstransferase [Escherichia coli IAI39] gi|218430801|emb|CAR11675.1| geranyltranstransferase [Escherichia coli UMN026] gi|238861298|gb|ACR63296.1| geranyltranstransferase [Escherichia coli BW2952] gi|242376199|emb|CAQ30890.1| farnesyl diphosphate synthase / geranyl diphosphate synthase [Escherichia coli BL21(DE3)] gi|253325638|gb|ACT30240.1| Polyprenyl synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972388|gb|ACT38059.1| geranyltranstransferase [Escherichia coli B str. REL606] gi|253976598|gb|ACT42268.1| geranyltranstransferase [Escherichia coli BL21(DE3)] gi|260450392|gb|ACX40814.1| Polyprenyl synthetase [Escherichia coli DH1] gi|284920231|emb|CBG33290.1| geranyltranstransferase [Escherichia coli 042] gi|291429394|gb|EFF02414.1| geranyltranstransferase [Escherichia coli FVEC1412] gi|291433734|gb|EFF06707.1| geranyltranstransferase [Escherichia coli B185] gi|298280266|gb|EFI21770.1| geranyltranstransferase [Escherichia coli FVEC1302] gi|299880004|gb|EFI88215.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|300315322|gb|EFJ65106.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|300355970|gb|EFJ71840.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300397469|gb|EFJ81007.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|300414649|gb|EFJ97959.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300452528|gb|EFK16148.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300461855|gb|EFK25348.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|301074489|gb|EFK89295.1| polyprenyl synthetase [Escherichia coli MS 146-1] gi|308121506|gb|EFO58768.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|308924592|gb|EFP70087.1| geranyltranstransferase [Shigella dysenteriae 1617] gi|309700683|emb|CBI99979.1| geranyltranstransferase [Escherichia coli ETEC H10407] gi|310337165|gb|EFQ02303.1| geranyltranstransferase [Escherichia coli 1827-70] gi|315135103|dbj|BAJ42262.1| geranyltranstransferase [Escherichia coli DH1] gi|320201662|gb|EFW76238.1| geranyltranstransferase [Escherichia coli EC4100B] gi|323164212|gb|EFZ50019.1| geranyltranstransferase [Shigella sonnei 53G] gi|323170503|gb|EFZ56153.1| geranyltranstransferase [Escherichia coli LT-68] gi|323943227|gb|EGB39383.1| polyprenyl synthetase [Escherichia coli E482] gi|323963407|gb|EGB58969.1| polyprenyl synthetase [Escherichia coli H489] gi|323972271|gb|EGB67481.1| polyprenyl synthetase [Escherichia coli TA007] gi|324016723|gb|EGB85942.1| polyprenyl synthetase [Escherichia coli MS 117-3] gi|331037736|gb|EGI09956.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli H736] gi|331051097|gb|EGI23149.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli M718] gi|331060221|gb|EGI32185.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA143] gi|331070955|gb|EGI42314.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Escherichia coli TA280] gi|332103919|gb|EGJ07265.1| geranyltranstransferase [Shigella sp. D9] gi|332341784|gb|AEE55118.1| geranyltranstransferase IspA [Escherichia coli UMNK88] Length = 299 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|293408568|ref|ZP_06652407.1| geranyltranstransferase [Escherichia coli B354] gi|291471746|gb|EFF14229.1| geranyltranstransferase [Escherichia coli B354] Length = 299 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S + D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPKVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|188994672|ref|YP_001928924.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277] gi|188594352|dbj|BAG33327.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277] Length = 325 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 17/227 (7%) Query: 20 LDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 L +++ Q + + D L I Y L LGGK++R L +F ++ AL V Sbjct: 7 LREIIEQEIASQPYDQRKPDGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPALEVA 66 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H ++L+HDDL MD +RRGK TVH ++ + TAI++G+ + A+E ++ + Sbjct: 67 MAIETYHNFTLLHDDL--MDKSSMRRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDS 124 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 R +L N + GQ D+ E D E + + ++KT L+ A Sbjct: 125 ------RLLPVLLPLFNRMAMEICQGQQYDMDFERRDFVAEDEYLEMIRLKTAVLLATAL 178 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI A + + L +G ++G+ FQL DDLLD D L KK Sbjct: 179 KMGAIAGGADIEKADILYRYGIHIGLSFQLEDDLLDVYGDPIILGKK 225 >gi|91215079|ref|ZP_01252051.1| putative isoprenoid biosynthesis related protein [Psychroflexus torquis ATCC 700755] gi|91186684|gb|EAS73055.1| putative isoprenoid biosynthesis related protein [Psychroflexus torquis ATCC 700755] Length = 324 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 12/222 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 ++ L + + + L I Y L LGGK++R LV A +F A+ Sbjct: 4 LEAYKLSFLEYMEAQVPKKEPRNLYEPIEYILGLGGKRLRPVLVLMSADIFGGGREKAMD 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 AIE H +SL+HDD+ MD+ +RRG+ TVH +++ T I++G+ +L A+++ + Sbjct: 64 AALAIEIFHNFSLVHDDI--MDDAPLRRGQQTVHEKWNINTGILSGDAMLINAYQLFENY 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF 191 + L+ + GQ D+ E D+ + + + KT L+ Sbjct: 122 PAEHFKP------LAELFTKTAIEVCEGQQYDVDFEERDDVTIEEYLKMIEYKTAVLVGA 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GAI++ SQN + ++ FG LGI FQ+ DD LD + Sbjct: 176 ALKMGAILSDVSQNVQNKIYEFGRLLGIAFQIQDDYLDTFGE 217 >gi|238022826|ref|ZP_04603252.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147] gi|237866029|gb|EEP67165.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147] Length = 324 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 115/228 (50%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L+ + R++ +++ + Q+ + +Q ++SA GGK++R L Sbjct: 8 FQQNLETDLSRVNVVINRAV-QSEVALISQIGTYIISA------GGKRLRPILTILAGKC 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 LGCDSDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + ++ +++ NI +G + Q+++I + I ET+ + + K Sbjct: 119 TRAFQLMVGSGS-----LKILEVMAEATNIIAEGEVM-QLMNIGNTEISETEYLQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T L A + GAI+A A+ +++ L+ +G ++G FQ+ DD+LD Sbjct: 173 TAKLFEAAAQVGAILAGATSGQEQALKDYGAHIGTAFQIIDDVLDYSG 220 >gi|261379260|ref|ZP_05983833.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703] gi|284797691|gb|EFC53038.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703] Length = 324 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 115/235 (48%), Gaps = 18/235 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L ++ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPDDLAKVNAVINQAV-QSDVALISQIGTYIISA------GGKRLRPIITILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEQYVQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD E++ K Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGK 227 >gi|294674496|ref|YP_003575112.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola 23] gi|294472118|gb|ADE81507.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola 23] Length = 324 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 70/228 (30%), Positives = 116/228 (50%), Gaps = 19/228 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 ++ K+++ LD+L+ + L I+Y L +GGK++R L +L+ + Sbjct: 5 EDLLKKVNEALDNLVYD-------RQPASLYDPIKYVLSIGGKRVRPVLTMLAYNLYKDD 57 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L+ + +E H ++L+HDDL MD+ +RRG TVH ++D AI++G+ +L AF Sbjct: 58 PLSIMSQALGLETYHNFTLLHDDL--MDHADMRRGHETVHKKWDANRAILSGDTMLLQAF 115 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKT 185 E + + + + + GQ LD++ E + E + + ++KT Sbjct: 116 ERVEDCDPAKLPAVFKVFIQT------TLEIGEGQQLDVEFEQRNDVTEDEYIEMIRLKT 169 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ AC+ GAIMA A + E + FGE LG+ FQL DDLLD D Sbjct: 170 SVLLACACKVGAIMADAPAEDIENMYKFGEKLGLAFQLQDDLLDVYGD 217 >gi|237749261|ref|ZP_04579741.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13] gi|229380623|gb|EEO30714.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13] Length = 329 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 118/231 (51%), Gaps = 15/231 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 S + + + ++ I+ + L + +Q + L++A GGK+IR LV A Sbjct: 11 DSFLSTIAPDMEGVNRIIREQLHSNVPFI-SQIAEYLINA------GGKRIRPALVLLMA 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 F + A IE IH +L+HDD+ +D +RRGK + + + +++ G+ Sbjct: 64 RAFGYQGTQHQMLAAMIEFIHTATLLHDDV--VDEADLRRGKSSANALFGNAASVLVGDF 121 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L T AF++I + +++R +LS N+ +G + Q++++++ IDE + + Sbjct: 122 LYTRAFQMIVA-----VNDMRILPVLSDATNLIAEGEVM-QLVNVRNPAIDEKRYMEVIY 175 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT L + GA++AHAS+ E E +G +LGI FQL DDLLD + Sbjct: 176 AKTARLFEVSAVLGALIAHASEKEIEAAAAYGRSLGIAFQLVDDLLDYAGE 226 >gi|294678700|ref|YP_003579315.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003] gi|77862362|gb|ABB04465.1| decaprenyl diphosphate synthase [Rhodobacter capsulatus] gi|294477520|gb|ADE86908.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003] Length = 333 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 14/230 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L L E+ ++ ++ + + + + L+ A GGK++R L A Sbjct: 12 DRLAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEA------GGKRLRPMLTLAAA 65 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 66 RLVGYGGPFHVHLAATVEFIHTATLLHDDV--VDESRQRRGRPTANLLWDNKSSVLVGDY 123 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L +F++++ N+R +L+ + +G + Q+ Q+ E + + Sbjct: 124 LFARSFQLMTDTG-----NMRVMEILANASAVIAEGEVL-QLTAAQNLATTEDIYLRVIR 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT AL A E G I+ A +++ + L +G+ LGI FQ+ DDLLD Sbjct: 178 GKTAALFSAATEVGGIIGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGG 227 >gi|218768956|ref|YP_002343468.1| geranyltranstransferase [Neisseria meningitidis Z2491] gi|121052964|emb|CAM09318.1| geranyltranstransferase [Neisseria meningitidis Z2491] gi|319411254|emb|CBY91661.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP synthase) [Neisseria meningitidis WUE 2594] Length = 298 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 84/238 (35%), Positives = 130/238 (54%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L H + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G Sbjct: 59 ASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178 + L T AF+++S P T+L + ++ L G GM GGQ +D+ + + + +T + Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMAGGQAIDLANVGKQMAQTDLE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|325498296|gb|EGC96155.1| geranyltranstransferase [Escherichia fergusonii ECD227] Length = 299 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELAGASGIGGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|24111799|ref|NP_706309.1| geranyltranstransferase [Shigella flexneri 2a str. 301] gi|30061915|ref|NP_836086.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T] gi|24050587|gb|AAN42016.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella flexneri 2a str. 301] gi|30040159|gb|AAP15892.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella flexneri 2a str. 2457T] gi|281599753|gb|ADA72737.1| Geranyltranstransferase [Shigella flexneri 2002017] gi|313646962|gb|EFS11419.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T] gi|332760701|gb|EGJ90989.1| geranyltranstransferase [Shigella flexneri 4343-70] gi|332761685|gb|EGJ91964.1| geranyltranstransferase [Shigella flexneri 2747-71] gi|332764298|gb|EGJ94534.1| geranyltranstransferase [Shigella flexneri K-671] gi|332768526|gb|EGJ98709.1| geranyltranstransferase [Shigella flexneri 2930-71] gi|333007813|gb|EGK27289.1| geranyltranstransferase [Shigella flexneri K-218] gi|333021995|gb|EGK41240.1| geranyltranstransferase [Shigella flexneri K-304] Length = 299 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|139473477|ref|YP_001128193.1| geranyltranstransferase [Streptococcus pyogenes str. Manfredo] gi|134271724|emb|CAM29957.1| putative geranyltranstransferase [Streptococcus pyogenes str. Manfredo] Length = 290 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 9/226 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75 +D+ + + ++ L+ AI Y++ GGK+IR ++ E F V+ A + Sbjct: 5 ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F +I+ Sbjct: 65 AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFAC 193 +L ++ L+ L+ G GM+GGQMLD++ E + + I KTG L+ F Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQSLSLSQLSLIHLNKTGKLLTFPF 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++ A++ + +++L G +G FQ+ DD+LD EDL K Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228 >gi|320173761|gb|EFW48944.1| geranyltranstransferase [Shigella dysenteriae CDC 74-1112] Length = 299 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLNALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|34540567|ref|NP_905046.1| polyprenyl synthetase [Porphyromonas gingivalis W83] gi|34396880|gb|AAQ65945.1| polyprenyl synthetase [Porphyromonas gingivalis W83] Length = 325 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 17/227 (7%) Query: 20 LDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 L +++ Q + + D L I Y L LGGK++R L +F ++ AL V Sbjct: 7 LREIIEQEIASQPYDQRKPDGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPALEVA 66 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H ++L+HDDL MD +RRGK TVH ++ + TAI++G+ + A+E ++ + Sbjct: 67 MAIETYHNFTLLHDDL--MDKSSMRRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDS 124 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 R +L N + GQ D+ E D E + + ++KT L+ A Sbjct: 125 ------RLLPVLLPLFNRMAMEICQGQQYDMDFERRDFVAEDEYLEMIRLKTAVLLATAL 178 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI A + + L +G ++G+ FQL DDLLD D L KK Sbjct: 179 KMGAIAGGADIEKADILYRYGIHIGLSFQLEDDLLDVYGDPIILGKK 225 >gi|146299023|ref|YP_001193614.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101] gi|146153441|gb|ABQ04295.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101] Length = 324 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 15/216 (6%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D L H + L I Y L LGGK++R L A +F+ N+ TAL A+E Sbjct: 13 DYLKNQNIH---KEPTNLYEPIEYILGLGGKRMRPVLTLMAAEVFDTNYKTALPAAMAVE 69 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 H +SL+HDD+ MD+ +RRG+ TVH ++D T I++G+ +L A++ + ++ Sbjct: 70 VFHNFSLVHDDI--MDDAPLRRGQVTVHEKWDLNTGILSGDAMLILAYQYFEQYEPEVFR 127 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGA 197 + L+ + + GQ D+ E + + + + KT L+ A + GA Sbjct: 128 D------LAKLFSKTALEVCEGQQWDVDFEQRNNVTIPEYLKMIEYKTAVLVAAAMKMGA 181 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I+A S+ E + + FG NLG+ FQL DD LD D Sbjct: 182 IVAKTSEKEGDLIYDFGLNLGLAFQLQDDYLDAFGD 217 >gi|319639120|ref|ZP_07993876.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102] gi|317399597|gb|EFV80262.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102] Length = 324 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 112/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L ++ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPDDLAKVNAVINQAV-QSDVALISQIGTYIISA------GGKRLRPIITILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEQYVQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|228474123|ref|ZP_04058864.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624] gi|228274637|gb|EEK13478.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624] Length = 323 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 14/230 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 + I ++ + H++ + L I Y L +GGK++R L A +F ++ A Sbjct: 2 QLITDYQNEFVAFMQEHLKERDPKNLYDPIHYILNVGGKRLRPTLTMLSADIFGTDYHKA 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L A+E H +SL+HDD+ MD +RRG PTVH +++ T I++G+ +L A++ Sbjct: 62 LYAALAVEIFHNFSLVHDDI--MDAAPLRRGHPTVHTKWNLNTGILSGDTMLILAYQYFE 119 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALM 189 + + L+ + + GQ D+ E + Q + KT L+ Sbjct: 120 QYEPNIFQE------LAKIFSKTAIEVCEGQQYDVDFEQQAQVSTDQYLKMIAYKTAVLV 173 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237 A + GAI+A ++ K+++ FG LGI +QL DD LD D KK Sbjct: 174 GAALQMGAIIAQTTEENKQKIYDFGLALGIAYQLQDDYLDTFGDASFGKK 223 >gi|91209490|ref|YP_539476.1| geranyltranstransferase [Escherichia coli UTI89] gi|218557330|ref|YP_002390243.1| geranyltranstransferase [Escherichia coli S88] gi|237707585|ref|ZP_04538066.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA] gi|91071064|gb|ABE05945.1| geranyltranstransferase [Escherichia coli UTI89] gi|218364099|emb|CAR01764.1| geranyltranstransferase [Escherichia coli S88] gi|222032216|emb|CAP74955.1| Geranyltranstransferase [Escherichia coli LF82] gi|226898795|gb|EEH85054.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA] gi|294493422|gb|ADE92178.1| geranyltranstransferase [Escherichia coli IHE3034] gi|307628110|gb|ADN72414.1| geranyltranstransferase [Escherichia coli UM146] gi|312944998|gb|ADR25825.1| geranyltranstransferase [Escherichia coli O83:H1 str. NRG 857C] gi|315289864|gb|EFU49254.1| polyprenyl synthetase [Escherichia coli MS 110-3] gi|323952967|gb|EGB48835.1| polyprenyl synthetase [Escherichia coli H252] gi|323958614|gb|EGB54317.1| polyprenyl synthetase [Escherichia coli H263] Length = 299 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|237730107|ref|ZP_04560588.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2] gi|226908713|gb|EEH94631.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2] Length = 370 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 119/232 (51%), Gaps = 15/232 (6%) Query: 12 NSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + D+ A+ ++ ++D +L++ + Y ++ GGK+IR + A Sbjct: 49 NLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 108 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 109 QENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 166 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 167 FQMMTSLGS-----LKVLEVMSKAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 220 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 L A + I+A S+ +++ L+ +G LG FQL DDLLD D L K Sbjct: 221 LFEAAAQCSGILAGCSEEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGK 272 >gi|22536677|ref|NP_687528.1| geranyltranstransferase [Streptococcus agalactiae 2603V/R] gi|25010613|ref|NP_735008.1| hypothetical protein gbs0544 [Streptococcus agalactiae NEM316] gi|76787307|ref|YP_329231.1| geranyltranstransferase [Streptococcus agalactiae A909] gi|76799070|ref|ZP_00781262.1| geranyltranstransferase [Streptococcus agalactiae 18RS21] gi|77405325|ref|ZP_00782421.1| geranyltranstransferase [Streptococcus agalactiae H36B] gi|77412376|ref|ZP_00788686.1| geranyltranstransferase [Streptococcus agalactiae CJB111] gi|77414020|ref|ZP_00790192.1| geranyltranstransferase [Streptococcus agalactiae 515] gi|22533517|gb|AAM99400.1|AE014214_14 geranyltranstransferase, putative [Streptococcus agalactiae 2603V/R] gi|23094967|emb|CAD46188.1| Unknown [Streptococcus agalactiae NEM316] gi|76562364|gb|ABA44948.1| geranyltranstransferase [Streptococcus agalactiae A909] gi|76585585|gb|EAO62151.1| geranyltranstransferase [Streptococcus agalactiae 18RS21] gi|77159946|gb|EAO71085.1| geranyltranstransferase [Streptococcus agalactiae 515] gi|77161564|gb|EAO72565.1| geranyltranstransferase [Streptococcus agalactiae CJB111] gi|77176120|gb|EAO78893.1| geranyltranstransferase [Streptococcus agalactiae H36B] gi|319744560|gb|EFV96913.1| geranyltranstransferase [Streptococcus agalactiae ATCC 13813] Length = 290 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 77/224 (34%), Positives = 121/224 (54%), Gaps = 9/224 (4%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGA 77 +D+ + + + + L+ AI Y++ GGK+IR ++ E F V V A Sbjct: 7 IDEAIHRYYKQTHSVVSPDLIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYDVAA 66 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SLIHDDLP+MDN RRG+ T H ++DE TA++AG+ L F+++ + Sbjct: 67 ALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKAGFK 126 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195 +R +LS++ G GM+GGQMLD++ E + + +I KTG L+ + + Sbjct: 127 ADVTVRLIELLSMS--AGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLAYPFVA 184 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I+A S+ K +L G +G FQ+ DD+LD E+L K Sbjct: 185 AGILAEKSEEVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGK 228 >gi|329905263|ref|ZP_08274077.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae bacterium IMCC9480] gi|327547655|gb|EGF32446.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae bacterium IMCC9480] Length = 243 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 13/218 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 +L+++ H + +++ I GGK+IR LV A F N + A +E Sbjct: 25 NLVIRRQLHSEVALVNQIAEYI--ISAGGKRIRPALVLLMARAFGYNGTHHHDLAAVVEF 82 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH +L+HDD+ +D +RRG+ T + + +++ G+ + + AF+++ S D+ Sbjct: 83 IHTATLLHDDV--VDESSLRRGRQTANALFGNAASVLVGDFVYSRAFQMMVS-----VDD 135 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201 +R +LS N+ +G + Q+L++ D + E + + + KT L A + GA++A Sbjct: 136 MRVMRILSDATNVIAEGEVL-QLLNMHDPDVTEARYLQVIRSKTAKLFEAAAQLGALVAG 194 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 AS + E +G +LG FQL DD+LD D+ K Sbjct: 195 ASAEDVEAAAEYGRSLGTAFQLIDDVLDYSGNASDIGK 232 >gi|222110169|ref|YP_002552433.1| polyprenyl synthetase [Acidovorax ebreus TPSY] gi|221729613|gb|ACM32433.1| Polyprenyl synthetase [Acidovorax ebreus TPSY] Length = 306 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 11/236 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++ R++ L + A L A+RYA+L GGK++R LV Sbjct: 15 FDFDGWMRAQLARVEDALSHWVCPDA-------PAGLGEAMRYAVLDGGKRLRPLLVLAA 67 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 N ALR A+E IH YSL+HDD+P MDN +RRGKPTVH+ + E A++AG+ Sbjct: 68 CEAVGGNAQAALRAACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVPFGEARALLAGD 127 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L AFE++ +P+ + ++++L L G GM GGQ +D+ + E Q+ Sbjct: 128 ALQALAFELL-TPEDGVPPAMQARLCRELARAAGADGMAGGQAIDLASVGLQLSEDQLRQ 186 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + ++KTGAL+ + GA+ + L +G +G+ FQ+ DD+LD +D Sbjct: 187 MHRLKTGALLQASVVMGAVCGQTPEGTLRALSDYGAAMGLAFQVVDDVLDVTQDSA 242 >gi|325267223|ref|ZP_08133886.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394] gi|324981284|gb|EGC16933.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394] Length = 324 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L+ + R++ +++ + + + + S GGK++R L Sbjct: 8 FQQNLEADLSRVNVVINRAVQSDVALISQIGTYIIGS-------GGKRLRPILTILSGKC 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 LGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + ++ +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVGSGS-----LKILEVMADATNIIAEGEVM-QLMNIGNVDITEQQYLQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T L A + GAI+A A ++ L+ FG +G FQ+ DD+LD Sbjct: 173 TAKLFEAAAQVGAILAGADDEQERALKEFGMYMGTAFQIVDDVLDYSG 220 >gi|223986292|ref|ZP_03636304.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM 12042] gi|223961731|gb|EEF66231.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM 12042] Length = 280 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 7/217 (3%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGA 77 ++++ + + A+ Y+L+G GK++R L+ A + ++ Sbjct: 1 MMNEFEAFLQRQCRLLKRSEVSEAMEYSLMGKGKRLRPQLLFAVAEGYGLSAQAGFMAAG 60 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E +H YSLIHDDLP+MDN RRG+ T H Q++E TAI+AG+GLLT AF + ++ Sbjct: 61 ALEMMHTYSLIHDDLPAMDNDDYRRGRKTCHKQFNEATAILAGDGLLTQAFVLAANSSDD 120 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACE 194 ++ + L G +GM+ GQ+ D++ E + Q+ + KTG L Sbjct: 121 PVKALKI--VKELASAGGAEGMILGQIKDLEAENSQAVTLEQLKEVHLYKTGCLFTAPLV 178 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 GAI+A + R G +G+ FQ+ DD+LD Sbjct: 179 MGAILAGQDAA-IPQWRRIGALMGLAFQIQDDILDVT 214 >gi|320181597|gb|EFW56512.1| geranyltranstransferase [Shigella boydii ATCC 9905] Length = 299 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T A+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPATAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDSDMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|261378364|ref|ZP_05982937.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685] gi|269145472|gb|EEZ71890.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685] Length = 324 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 116/235 (49%), Gaps = 18/235 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQKHLSEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGRS 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 ++ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDNEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + +R +++ NI +G + Q+++I + I E + + + K Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEEYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 T L A + G+I+ +A ++ L+ +G +G FQ+ DD+LD E++ K Sbjct: 173 TAKLFEAAAQVGSILGNAPPECEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGK 227 >gi|224825912|ref|ZP_03699016.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] gi|224602136|gb|EEG08315.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] Length = 298 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 76/225 (33%), Positives = 121/225 (53%), Gaps = 9/225 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 N + + ++ L LL S RL A+RY+ L GGK++R LV Sbjct: 3 NDNFIGWMTGIQQTMEDALARLLPNPESA-----PQRLHEAMRYSTLDGGKRVRPLLVHA 57 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 L + N R+GAA+E IH YSL+HDD+P MD+ +RRGKPT H+ +D+ TA++ G Sbjct: 58 AGELVSANPEHLARIGAAVEMIHAYSLVHDDMPCMDDDVLRRGKPTCHVAFDDATALLVG 117 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178 + L T AF+++++P + + +++ +L G GM GGQ +D+ + + ++ Sbjct: 118 DALQTLAFDVLATPLDGVAAAAQLEMVRTLARASGHGGMAGGQAIDLASVGQTLSLPELE 177 Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQ 222 + +KTGAL+ A GA+ S E ERL F + +G+ FQ Sbjct: 178 YMHCLKTGALIRAAVLLGALAGTPLSAEETERLDHFAKRIGLAFQ 222 >gi|149278033|ref|ZP_01884172.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter sp. BAL39] gi|149231231|gb|EDM36611.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter sp. BAL39] Length = 322 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 124/235 (52%), Gaps = 22/235 (9%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64 P++LQE ID + +++ +RL I Y + LGGK+IR LV A L Sbjct: 4 PTQLQEF---IDQAIQNIIY-------PAQPERLYLPISYIMSLGGKRIRPALVLMSADL 53 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F + + AIE H ++LIHDD+ MDN +RRGK TVH ++ AI++G+ ++ Sbjct: 54 FAADVHQVMPAALAIETFHNFTLIHDDI--MDNAPLRRGKATVHEKWGVNNAILSGDVMM 111 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQ 181 A + ++ + + T N QG+ GQ LD++ E D+ + + Sbjct: 112 VEANKHLAMLDAAVLKDAL------ETFNSTAQGVCEGQQLDMEFESRDQVSIPEYINMI 165 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++KT L+ A + GA +A A++++ E+L FGENLGI FQL DD+LD D K Sbjct: 166 RLKTAVLLGGAMKLGAQVARATKSQAEQLYAFGENLGIAFQLQDDILDVYGDPEK 220 >gi|46015525|pdb|1RQI|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Dimethylallyl S- Thiolodiphosphate gi|46015526|pdb|1RQI|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Dimethylallyl S- Thiolodiphosphate Length = 300 Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 3 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 58 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 117 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 118 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 177 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 178 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 237 Query: 236 KK 237 K+ Sbjct: 238 KR 239 >gi|254236932|ref|ZP_04930255.1| geranyltranstransferase [Pseudomonas aeruginosa C3719] gi|126168863|gb|EAZ54374.1| geranyltranstransferase [Pseudomonas aeruginosa C3719] Length = 295 Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 10/236 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + R+D LD L + +Q RL A+RY+++ GGK++R L Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL Sbjct: 57 ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 AFE+++ + +++ ML+ G GM+GGQ +D+ +D+ + ++ Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ + GA+ + A L + E +G+ FQ+ DD+LD E D Sbjct: 177 HRHKTGALIEASVRLGALASGRAESASLAALERYAEAIGLAFQVQDDILDVESDTA 232 >gi|242240309|ref|YP_002988490.1| geranyltranstransferase [Dickeya dadantii Ech703] gi|242132366|gb|ACS86668.1| Polyprenyl synthetase [Dickeya dadantii Ech703] Length = 303 Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 128/237 (54%), Gaps = 10/237 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +L + +RI+T L + L+ A+ Y +LLGGK++R FLV Sbjct: 3 DFLEQLHAHHQRINTTLRRFISAL-----PFQQIPLIEAMAYGSLLGGKRLRPFLVYSTG 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LFN+ + AA+ECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ Sbjct: 58 RLFNLPLESLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 117 Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ + + D R ++ L G+ GM GGQ LD++ E +D + Sbjct: 118 LQTLAFSILAGTEMPRVSDRDRLSMIAELASASGVGGMCGGQALDLEAEGRQVDLAALEQ 177 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ + GA+ A A + L + +G+ FQ+ DD+LD D Sbjct: 178 IHRHKTGALIRASVRLGALAAGEAGRQVMPSLDRYANAIGLAFQVQDDILDVIGDSA 234 >gi|325920751|ref|ZP_08182657.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865] gi|325548803|gb|EGD19751.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865] Length = 291 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 78/233 (33%), Positives = 122/233 (52%), Gaps = 9/233 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 M+ L R + L+ L TA RL +A+R+A+LGG K++R LV Sbjct: 1 MSSAL---FDHWIARTERSLEACLPSTALA-----PQRLHAAMRHAVLGGGKRMRPLLVY 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +LF+ + + A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+A Sbjct: 53 ATGALFDADEDSLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILA 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L T AFE++++ + L+ +D + + + Sbjct: 113 GDALQTRAFELLAAASVSADLRVGWLQSLASAAGAAGMCGGQALDIDATGQLQSLSDLER 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + +KTGAL+ A GA+ A+ +++RL F + LG+ FQ+ DD+LD E Sbjct: 173 MHALKTGALIRAAVRMGALTGGAAHADQQRLDAFADALGLAFQVRDDILDVES 225 >gi|309378666|emb|CBX22737.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 324 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 108/231 (46%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + + + + S GGK++R + Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALIAQIGTYIIGS-------GGKRLRPIMTILAGRS 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 ++ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDNEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|326794293|ref|YP_004312113.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1] gi|326545057|gb|ADZ90277.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1] Length = 301 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 88/239 (36%), Positives = 130/239 (54%), Gaps = 20/239 (8%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70 + R+D L+D L Q + D L A+RY+L GGK++R LV A LF+ ++ Sbjct: 10 SRDRVDRYLNDQLTQYDA------ADYLHEAMRYSLFNGGKRVRPMLVYATAELFSESNR 63 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 AAIE IH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ L T+AFE+ Sbjct: 64 LTDASAAAIESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQFDEATAILTGDALQTFAFEL 123 Query: 131 ISSPKTQLKDNIRSQL-------MLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181 +S+ ++ + + + SL+ G GM+ GQM+D+ D I + + Sbjct: 124 LSASYNEIDTDNLADCKTRQLRLIRSLSRASGRFGMVTGQMIDLNNVDRSITLETLEKMH 183 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA Q +L + +G+ FQ+ DD++D D L K Sbjct: 184 QHKTGALIRASVLMGAQSVGIEDQKILSQLDKYASAIGLAFQVQDDIIDITSDTQTLGK 242 >gi|295397723|ref|ZP_06807795.1| geranyltranstransferase [Aerococcus viridans ATCC 11563] gi|294974052|gb|EFG49807.1| geranyltranstransferase [Aerococcus viridans ATCC 11563] Length = 297 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 114/212 (53%), Gaps = 3/212 (1%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 +LD+ +L++ +L ++ Y+L GGK+IR L+ NV+ L Sbjct: 13 VLDEAILKSVDQFGHAQPGQLKESMVYSLNTGGKRIRPMLLLATLKALNVDIQIGLNTAV 72 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH YSLIHDDLP+MDN RRGK T H +DE TAI+AG+ LLT +F +I++ Sbjct: 73 ALEYIHTYSLIHDDLPAMDNDDYRRGKLTNHKAFDEATAILAGDSLLTDSFALIANDSKI 132 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195 + L+ L+ G GM+ GQ+LD+ E I+ + I K KTG L+ +A + Sbjct: 133 QNMQTKVNLIAELSKAAGSNGMIAGQILDVDSEGKQINLRTLQDIHKHKTGELIRYAVFA 192 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 G +A AS L F GI +Q+ +DL Sbjct: 193 GGQIAQASSEVATLLDDFAWAYGIAYQIQNDL 224 >gi|291166548|gb|EFE28594.1| geranyltranstransferase [Filifactor alocis ATCC 35896] Length = 296 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 130/235 (55%), Gaps = 6/235 (2%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M S QE ++ L ++ H + ++ Y+LL GGK+IR L Sbjct: 1 MKNKFISAYQEQKNYVEKCLKEI---AEKHTLKAIATLGMESMNYSLLAGGKRIRPILCL 57 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + A L+++++ L +A+E IH YSLIHDDLP+MD+ +RRGKPT H Y E AI+A Sbjct: 58 QSADLYHISNEAILPYASALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVYGEAIAILA 117 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+GLL A+EI+ + + + + + + G+ GM+ GQ+LD ++++ D + Sbjct: 118 GDGLLNLAYEIMLNDLLHGYTDGKLKAVHYIAKAAGIHGMVAGQVLDLQMENQRCDADLL 177 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I + KTG L+ + +GA++ AS+ + + ++LG++FQ+ DD+LD Sbjct: 178 KKIHRNKTGELLKASILAGALVGGASEEDCYYWEQYADHLGLVFQITDDMLDVIG 232 >gi|300313126|ref|YP_003777218.1| geranyltranstransferase [Herbaspirillum seropedicae SmR1] gi|300075911|gb|ADJ65310.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Herbaspirillum seropedicae SmR1] Length = 311 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 16/242 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 + + ++ +L+ L + RL A+RY A+ GGK++R LV Sbjct: 12 FAQWMGQVQSGMEEVLNRFLPSA-----SVVPARLHEAMRYTAMDGGKRVRPLLVYAAGE 66 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF+ R AA+E IH YSL+HDD+P MD+ +RRGKPTVHI+YDE TA++ G+ L Sbjct: 67 LFDTPRALLERAAAAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHIRYDEATALLVGDAL 126 Query: 124 LTYAFEIISSPKTQLK-------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE 174 AF+ +++P + +++ L G GM GGQ +D+ + Sbjct: 127 QAQAFDTLAAPLESEAGSADAGLPARQLRMVKLLAEAAGSVGMCGGQAIDLASVGMTLSL 186 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ + ++KTGAL+ A GA+ A + E L + +G+ FQ+ DD+LD D Sbjct: 187 AELEQMHRLKTGALLRAAVLLGALGGKALTAAESAALDDYARAIGLAFQVVDDILDATAD 246 Query: 234 LP 235 Sbjct: 247 SA 248 >gi|159045612|ref|YP_001534406.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12] gi|157913372|gb|ABV94805.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12] Length = 334 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 14/232 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + L E+ ++ ++ + + + + L+ A GGK++R L A L Sbjct: 15 LATHLAEDMDAVNVLIRERMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLATARL 68 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L Sbjct: 69 CGYTGPYHVHLAATVEFIHTATLLHDDV--VDESNQRRGRPTANLLWDNQSSVLVGDYLF 126 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 +F+++ + +R +L+ +G + Q+ QD DE + + K Sbjct: 127 ARSFQLMVETGS-----LRVLDILANAAATIAEGEVL-QLSAAQDLATDEDIYLKVVRGK 180 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 T AL A E G ++A A + + L +G+ LGI FQ+ DDLLD D K Sbjct: 181 TAALFSAATEVGGVIAGADEAQVRALFTYGDALGIAFQIVDDLLDYGGDSTK 232 >gi|256820671|ref|YP_003141950.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271] gi|256582254|gb|ACU93389.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271] Length = 321 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 14/228 (6%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 I+ L + L I+Y L LGGK+IR L +F ++ AL Sbjct: 4 IEEYKTAFLQHIEKIFTPKEPIHLYEPIQYILNLGGKRIRPLLTLIATDIFGKDYCKALN 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 AIE H +SLIHDD+ MDN +RRGKPTVH ++D I++G+ +L A++++ Sbjct: 64 AATAIEVFHNFSLIHDDI--MDNASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDY 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF 191 +++ L T + + GQ +D+ E + E + KT L+ Sbjct: 122 PSEIFQE------LVKTLSETALKVCEGQQMDMDFEKLQEVSIEAYMQMISYKTSVLIGA 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237 A + G+I++ ++ + + FG NLGI FQL DD LD D KK Sbjct: 176 ALQMGSIISETTKENQMNMYNFGLNLGIAFQLQDDYLDTFGDASFGKK 223 >gi|327400499|ref|YP_004341338.1| polyprenyl synthetase [Archaeoglobus veneficus SNP6] gi|327316007|gb|AEA46623.1| Polyprenyl synthetase [Archaeoglobus veneficus SNP6] Length = 319 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 70/233 (30%), Positives = 117/233 (50%), Gaps = 18/233 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + ++ + S+ I+ + + L + + L +A R+ + GGK++R + A Sbjct: 2 SIKEEVLKRSEIINRAISEYL-------PVKEPEGLYNAARHLINAGGKRLRPVMCLISA 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + + AIE IH ++LIHDD+ MD +RRG PTVH+ YDE TAI+AG+ Sbjct: 55 EAVGGDVESVIPAAVAIETIHNFTLIHDDI--MDRDELRRGVPTVHVAYDEPTAILAGDT 112 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFM 179 L AF+I+SS + ++ +++ ML+ + GQ LD+ E I E++ Sbjct: 113 LFAEAFKILSSCNVEAENLVKASRMLADV----CIEICEGQYLDMSFEKREKISESEYLE 168 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + KT L+ AC A++ + L FG GI FQ+ DD+LD Sbjct: 169 MVRKKTAVLIASACAMPAVLFGMDS-YAKALWNFGIYSGIGFQIHDDVLDITG 220 >gi|117622682|ref|YP_851595.1| geranyltranstransferase [Escherichia coli APEC O1] gi|115511806|gb|ABI99880.1| geranyltranstransferase [Escherichia coli APEC O1] Length = 299 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRATVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|237747110|ref|ZP_04577590.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS] gi|229378461|gb|EEO28552.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS] Length = 329 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 14/235 (5%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 N S L ++ + D +++ H R+ Y + GGK+IR LV Sbjct: 7 NDSGNSFLSPVLPDLEAV--DRIIRQQMHSDIALVGRIAE---YLINAGGKRIRPVLVLL 61 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + A IE IH +L+HDD+ +D +RRG P+ + + ++++ G Sbjct: 62 MAKALGYQGKQHQTLAATIEFIHTATLLHDDV--VDESELRRGIPSANALFGNASSVLVG 119 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + L T AF+++ S N+R +L+ N+ +G + Q+++ ++ IDE + Sbjct: 120 DFLYTRAFQMMVSVG-----NMRILEVLAEATNLIAEGEVM-QLMNARNAAIDEDGYMKV 173 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT L + GA++AH S+ + FG +G+ FQL DD+LD D Sbjct: 174 IYAKTAKLFEASSVLGALVAHVSEEKIGAAARFGRAVGMAFQLIDDMLDYAGDTG 228 >gi|330877558|gb|EGH11707.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 295 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ L+ L + + RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPELG-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVWLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|315498417|ref|YP_004087221.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48] gi|315416429|gb|ADU13070.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48] Length = 303 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 101/230 (43%), Positives = 136/230 (59%), Gaps = 6/230 (2%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63 L ++QE + + LD+LL + RL A+RYA LG GK++R F E Sbjct: 13 LHERMQETADLVTMALDELLPRAEG-----FESRLTEAMRYAALGPGKRLRPFFALETGR 67 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF+ + LR A+ECIH YSL+HDDLP MD+ IRRG+ TVH YDE TA++AG+ L Sbjct: 68 LFDADSQAVLRAACALECIHAYSLVHDDLPCMDDDDIRRGQLTVHRAYDEATAVLAGDAL 127 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 T AFEI++S T +R +L+ L G QGM GGQM+D+ D V +Q+M Sbjct: 128 QTVAFEILASEDTHEDPRVRVELISRLALASGAQGMAGGQMIDLIGVSDDLGGVARMQRM 187 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ A E I+A A + E L F ++LG+ +Q+ADDLLD E D Sbjct: 188 KTGALIVHAFEIPIIIADAPEKEANSLIHFAQDLGLAYQIADDLLDVEGD 237 >gi|116333612|ref|YP_795139.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC 367] gi|116098959|gb|ABJ64108.1| farnesyl-diphosphate synthase [Lactobacillus brevis ATCC 367] Length = 300 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 120/209 (57%), Gaps = 7/209 (3%) Query: 29 SHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN--HLTALRVGAAIECIHCY 85 + + H+ +L +A+ Y+ L GGK++R L V R A+E +H Y Sbjct: 25 AILADSHDAQLAAAMTYSVLAGGKRLRPLLTVATMRSLGVTFVPERHWRPVMALELLHTY 84 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SLIHDDLP+MDN +RRG+PT H+++ A +AG+GLLT AF+ +++ T L +++ Sbjct: 85 SLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTA--TDLPATMQAA 142 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ +L G GM+ GQ DIQ E ++ +Q+ ++ K KTGAL+ +A ++G I+ A Sbjct: 143 LVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAP 202 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + F + G+ FQ+ DD+LD Sbjct: 203 EAQWPAYLQFADAFGLAFQIYDDILDVVS 231 >gi|119775962|ref|YP_928702.1| trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B] gi|119768462|gb|ABM01033.1| Trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B] Length = 333 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A N N L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 53 GGKRLRPLLSVLAARAVNYNGEGHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ + ++ +L+ N+ +G + Q+++ Sbjct: 111 ALFGNSASVLVGDFLYTRSFQMMTELGS-----MKVLQVLADATNVLAEGEVL-QLMNCN 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++A + + +E L +G+ LG FQL DDLL Sbjct: 165 DPNTTEESYMRVIYCKTAKLFEAATRLAAVLAGSDEKVEEALADYGKYLGTAFQLIDDLL 224 Query: 229 DCEEDLP 235 D D Sbjct: 225 DYTSDAE 231 >gi|325518120|gb|EGC97906.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49] Length = 294 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 116/235 (49%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L + +L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----AENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVALTDAAA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S + L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGDTPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSA 231 >gi|315616639|gb|EFU97256.1| geranyltranstransferase [Escherichia coli 3431] Length = 299 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ + AI+AG+ Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGKANAILAGDA 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179 L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + + Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|192362196|ref|YP_001983789.1| geranyltranstransferase [Cellvibrio japonicus Ueda107] gi|190688361|gb|ACE86039.1| geranyltranstransferase [Cellvibrio japonicus Ueda107] Length = 295 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 130/238 (54%), Gaps = 13/238 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 M +++DT LD +L +A+RY+L GGK++R L Sbjct: 1 MTWTFRDFASHCRQQVDTALDQRFP------LGDDPTQLRAAMRYSLFNGGKRVRPILAY 54 Query: 60 ECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 A N + + AA+EC+H YSL+HDDLP+MD+ +RRGKPT HI ++E TAI Sbjct: 55 ASALAINPHISLKQVDPIAAAVECLHAYSLVHDDLPAMDDDDLRRGKPTCHIAFNEATAI 114 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDET 175 +AG+GL T AFE++ S + +IR QL+ L G++GM+ GQ +D+ ++ + Sbjct: 115 LAGDGLQTLAFELLGSIEA--PADIRIQLIQVLAKGSGVEGMVLGQAIDLAAVEQQLTLE 172 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 Q+ + + KTGAL+ + GA+ A A+ + L + +G+ FQ+ DD+LD D Sbjct: 173 QLETMHRYKTGALIRASVTMGALFAGANNTQLAALDQYASAIGLAFQVQDDILDVISD 230 >gi|62179034|ref|YP_215451.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62126667|gb|AAX64370.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713495|gb|EFZ05066.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 299 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 91/242 (37%), Positives = 130/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ + + L + N ++ A++Y ALLGGK++R FLV Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+ Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L AF IIS P ++ D R ++ L + G+ GM GGQ LD+ E I + Sbjct: 117 LQALAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|304407042|ref|ZP_07388696.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] gi|304344029|gb|EFM09869.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9] Length = 304 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 15/246 (6%) Query: 1 MNGGL--PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFL 57 MN L + + + +++ L +L L ++ Y+L GGK++R L Sbjct: 1 MNDSLTIQQYISQTASDVESALQTILP-----TSWDVPALLKESMMYSLQAGGKRLRPAL 55 Query: 58 VTECASLFNVNHLTALRVGAA---IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 V A + A IE IH YSLIHDDLP+MDN RRGK T H + + Sbjct: 56 VLAAAEAVKCDSRAAAAAMPVACAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDA 115 Query: 115 TAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-- 170 AI+AG+ LLT+AF I S+ + + + +++ L+ G GM+GGQ D+ E Sbjct: 116 MAILAGDALLTHAFHAIVQSTRQHGVSAEVSLKIVEELSVMAGASGMVGGQAADMLGEQG 175 Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 Q+ I KT L+ F+ +GA++ A++ + E++ FG +G+ FQ+ DD+LD Sbjct: 176 VTSIDQLRYIHLHKTSDLIVFSLRAGAMIGGATEEQLEQITKFGTAIGLAFQIQDDILDL 235 Query: 231 EEDLPK 236 D K Sbjct: 236 VGDEAK 241 >gi|256828745|ref|YP_003157473.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028] gi|256577921|gb|ACU89057.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028] Length = 295 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 132/239 (55%), Gaps = 12/239 (5%) Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58 MN + ++L +++ L + + L++++ Y+L+ GGK++R L Sbjct: 1 MNPQEMKAELGVLGALVESRLATIFA------DGRSPSPLVASMEYSLMAGGKRLRPVLC 54 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 A L + L AIECIH YSLIHDDLP+MD+ +RRGKP+ H ++DE TAI+ Sbjct: 55 LAWAELAGGSVHAVLDFACAIECIHTYSLIHDDLPAMDDDDLRRGKPSNHKRFDEATAIL 114 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176 AG+GLLT AF + SS +L+ + + L+ G +GM+GGQ+LD+ + Q Sbjct: 115 AGDGLLTEAFTLASSL--ELRPERILKAVFHLSTAAGPRGMVGGQVLDMGLTGKSASLPQ 172 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + KTGAL+ +C +G ++ +E+ + +G +G+ FQ+ DD+LD D Sbjct: 173 LREMHAKKTGALIETSCVTGCVLGGGDDSEQAKASEYGRAIGLAFQVTDDILDVIGDEA 231 >gi|161521357|ref|YP_001584784.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616] gi|189352476|ref|YP_001948103.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616] gi|221197059|ref|ZP_03570106.1| geranyltranstransferase [Burkholderia multivorans CGD2M] gi|221203731|ref|ZP_03576749.1| geranyltranstransferase [Burkholderia multivorans CGD2] gi|221212347|ref|ZP_03585324.1| geranyltranstransferase [Burkholderia multivorans CGD1] gi|160345407|gb|ABX18492.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616] gi|189336498|dbj|BAG45567.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616] gi|221167446|gb|EED99915.1| geranyltranstransferase [Burkholderia multivorans CGD1] gi|221175897|gb|EEE08326.1| geranyltranstransferase [Burkholderia multivorans CGD2] gi|221183613|gb|EEE16013.1| geranyltranstransferase [Burkholderia multivorans CGD2M] Length = 294 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 116/235 (49%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L T RL A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----ADTVVPARLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181 + AF ++ L ++ L+ L G GM GGQ +D+ I Q+ + Sbjct: 118 QSQAFVALTDAAA-LSPVQQAALVRELALASGSLGMAGGQAIDLASVGIKLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S + L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGETPSADTMAALDVYAGAVGLAFQVVDDILDVTTDSA 231 >gi|116629411|ref|YP_814583.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC 33323] gi|282850888|ref|ZP_06260262.1| polyprenyl synthetase [Lactobacillus gasseri 224-1] gi|116094993|gb|ABJ60145.1| farnesyl-diphosphate synthase [Lactobacillus gasseri ATCC 33323] gi|282557840|gb|EFB63428.1| polyprenyl synthetase [Lactobacillus gasseri 224-1] Length = 288 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 24/246 (9%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN L ++ + +ID L+D L N + Y+++ GGK++R L Sbjct: 1 MN--LKDFQKKYTPQIDKFLEDHLASEVD------NPIFSKIMSYSVMAGGKRLRPLLFL 52 Query: 60 ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 N + LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+ Sbjct: 53 ATLETLNYKISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAIL 112 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-- 176 AG+ LL + I+ + L + ++ +G GM+GGQ LDI D + Sbjct: 113 AGDALLPLGIQWITEGSNS------AALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKEN 166 Query: 177 ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230 + ++ +KTG L+ + + A+ A AS +E +RL F + G +Q+ DDL+D Sbjct: 167 AKVIDQMEWLKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVET 226 Query: 231 EEDLPK 236 E++ K Sbjct: 227 EQEAGK 232 >gi|170744677|ref|YP_001773332.1| polyprenyl synthetase [Methylobacterium sp. 4-46] gi|168198951|gb|ACA20898.1| Polyprenyl synthetase [Methylobacterium sp. 4-46] Length = 290 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 98/223 (43%), Positives = 135/223 (60%), Gaps = 7/223 (3%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRV 75 + LD+ L + RL+ A+R+A+LGG K++R FL E A L + AL Sbjct: 2 EVFLDERLGDATGPGEITRPPRLMQAMRHAVLGGGKRLRPFLTIETARLLGGPYPGALAA 61 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 G IE +HCYSL+HDDLP+MD+ +RRGKPTVH +DE TAI+AG+ LLT AFE+++ P Sbjct: 62 GGGIELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAFDEATAILAGDALLTLAFELLADPA 121 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDETQVFMIQKMKTGALM 189 Q IR+ L+L L GL GM+GGQ+LD+ E +D +Q MKTGAL+ Sbjct: 122 WQPDAGIRADLVLGLARAAGLGGMVGGQLLDLGAEGRFGEAALDVDATLQLQAMKTGALL 181 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E+GAI+ A ++ L +G LG FQ+ADD+LD E Sbjct: 182 AVSVEAGAIVGGADAEQRAALLAYGRALGQAFQVADDILDREA 224 >gi|134093559|ref|YP_001098634.1| geranyltranstransferase [Herminiimonas arsenicoxydans] gi|133737462|emb|CAL60505.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Herminiimonas arsenicoxydans] Length = 294 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 73/220 (33%), Positives = 120/220 (54%), Gaps = 8/220 (3%) Query: 22 DLLLQTASHMQTQ--HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78 ++ L H+ RL A+ YA+L GGK++R LV +LF+ + R AA Sbjct: 14 EMELALVQHLPPVALTPARLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAA 73 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E IH YSL+HDD+P MD+ +RRGKPTVH++YDE A++ G+ L + AF++++ + Sbjct: 74 VEMIHAYSLVHDDMPCMDDDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGG--I 131 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196 + ++ L G GM GGQ +D+ + ++ + ++KTGAL+ + G Sbjct: 132 DPVRQLAMVRLLAKASGSLGMCGGQAIDLASVGLNLSLEELEQMHRLKTGALLRVSVLLG 191 Query: 197 AIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A+ + S E + L + +G+ FQ+ DD+LD D Sbjct: 192 ALAGKSLSAEETQALDSYAAAIGLAFQVVDDVLDATADSA 231 >gi|163741857|ref|ZP_02149247.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10] gi|161385030|gb|EDQ09409.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10] Length = 332 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 117/232 (50%), Gaps = 16/232 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + L + ++T++ + M ++H R+ + + GGK++R L A Sbjct: 13 LAATLSDEMAAVNTLI-------QTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 65 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L Sbjct: 66 LCGYSGDNHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 +F+++ + +R +L+ +G + QM D DE + + Sbjct: 124 FARSFQLMVETGS-----LRVLDILANASATIAEGEVL-QMTAASDLATDEEIYLQVVRG 177 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL A ++G ++A+A + + + L +G+ LGI FQ+ADDLLD + D Sbjct: 178 KTAALFSAATQAGGVVANAPETQIDALFAYGDALGIAFQIADDLLDYQGDSA 229 >gi|304389087|ref|ZP_07371131.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091] gi|304336960|gb|EFM03150.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091] Length = 298 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L H + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G Sbjct: 59 ASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178 + L T AF+++S P T+L + ++ L G GM GGQ +D+ + + + Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMAGGQAIDLANVGKQMVQADLE 177 Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|161527820|ref|YP_001581646.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1] gi|160339121|gb|ABX12208.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1] Length = 326 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 13/233 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66 ++++N+K ++ L L + +L A + + GGK++R ++V + Sbjct: 6 QIEKNAKTVNKYLKSKL--------KGNPKKLYDAAGHLIVHGGKRLRPYMVIRSCQILG 57 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 A+ +A+E +H ++L+HDD+ MDN +R G PT H +Y AI+AG+ L + Sbjct: 58 GKSSNAMPAASAVEMVHNFTLVHDDI--MDNDEMRHGVPTTHRKYGMPIAILAGDVLFSK 115 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 A+++IS K L+ +G L + + + ++Q + KT Sbjct: 116 AYQVISDTKLSPTATTHLISRLAKACVDVCEGQLLDVKMAEEKKIPTQSQYITMIGKKTA 175 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237 AL +C GAI A + L FG NLGI FQ+ DDL+ D KK Sbjct: 176 ALFDVSCAMGAICATNKGKDISNLSSFGRNLGIAFQITDDLIGVMGDPKITKK 228 >gi|330821215|ref|YP_004350077.1| Polyprenyl synthetase [Burkholderia gladioli BSR3] gi|327373210|gb|AEA64565.1| Polyprenyl synthetase [Burkholderia gladioli BSR3] Length = 294 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 117/235 (49%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L +T +L A+RYA++GG K++R L Sbjct: 3 FEQWMRAVLARVEDALGHYLP-----AETVVPGKLHEAMRYAVMGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVHIQYDE TA++ G+ L Sbjct: 58 LTGATEAARNAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHIQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF + + L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAF-VALTDAAALTAVQQAALVRELALASGSVGMAGGQAIDLASVGLMLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ A GA+ S + L + + +G+ FQ+ DD+LD D Sbjct: 177 RKKTGALLRAAVRMGALAGETPSDDTMRALDVYADAIGLAFQVVDDILDVTTDSA 231 >gi|326564543|gb|EGE14769.1| geranyltranstransferase [Moraxella catarrhalis 46P47B1] gi|326567053|gb|EGE17175.1| geranyltranstransferase [Moraxella catarrhalis BC1] Length = 351 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 19/220 (8%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLF--NVNHLTA-----------LRVGAAIEC 81 + L A RYA+ GGK++R LV + +H R A+E Sbjct: 74 PEPLNKACRYAMSNGGKRVRPLLVLSTFLMLIQTGDHKNHKNNLTKKIQMLFRAMMAVEL 133 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSLIHDDLP MD+ +RRG+PT HI Y E A++AG+ L + AFE++ + + Sbjct: 134 IHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALLAGDALQSIAFEVLFECYDKNSAD 193 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIM 199 L+ + + M+ GQMLDI+ E + + ++ I + KTGAL+ A GAI Sbjct: 194 DAIAYKLAKLLSCRARRMVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMGAIC 253 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 A + L+ + +G+ FQ+ DD+LD D L K Sbjct: 254 ADVQTDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGK 293 >gi|261401641|ref|ZP_05987766.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970] gi|313667728|ref|YP_004048012.1| octaprenyl-diphosphate synthase [Neisseria lactamica ST-640] gi|269208281|gb|EEZ74736.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970] gi|313005190|emb|CBN86623.1| octaprenyl-diphosphate synthase [Neisseria lactamica 020-06] Length = 324 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L E+ +++ +++ + + + + S GGK++R + Sbjct: 8 FQQHLSEDLAKVNKVINRAVQSDVALIAQIGTYIIGS-------GGKRLRPIMTILAGRS 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|126728318|ref|ZP_01744134.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Sagittula stellata E-37] gi|126711283|gb|EBA10333.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Sagittula stellata E-37] Length = 325 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 12/216 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 ++DL+ + M ++H R+ + + GGK++R L A L + + + Sbjct: 16 AAVNDLIRE---RMASRHAPRIPEVTAHLVEAGGKRLRPMLTLASAKLCGYDGPYHVHLA 72 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L +F++++ Sbjct: 73 ATVEFIHTATLLHDDV--VDESERRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTETG- 129 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196 N+R +LS +G + Q+ QD E + + KT AL A E G Sbjct: 130 ----NLRVLRILSDAAATIAEGEVL-QLTAAQDLSTTEDIYLQVVRGKTAALFSAATEVG 184 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++A + + L +G+ LGI FQ+ DDLLD Sbjct: 185 GVIAGRPEEDVRALFDYGDALGIAFQIVDDLLDYWG 220 >gi|313204536|ref|YP_004043193.1| polyprenyl synthetase [Paludibacter propionicigenes WB4] gi|312443852|gb|ADQ80208.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4] Length = 325 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 71/231 (30%), Positives = 118/231 (51%), Gaps = 15/231 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 K D I + + ++ L I Y L LGGK+IR L +LF+ + +A Sbjct: 2 KTFDEITQLISSEIEQINWSKEPRGLYEPIGYVLSLGGKRIRPALTLMACNLFSDDVQSA 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + IE H ++L+HDD+ MD +RRG+PTVH ++D+ TAI++G+ + +++ ++ Sbjct: 62 MNTALGIEIFHNFTLLHDDI--MDRADVRRGRPTVHKKWDDNTAILSGDVMQIASYQFVT 119 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALM 189 KT K ++ + S T + GQ D+ E D+ + + ++KT L+ Sbjct: 120 --KTPEKYLKKTLDLFSKTAA----EICEGQQYDVDFESRDDVKADEYLEMIRLKTAVLL 173 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 A ++GA + A + + + L FG N+G+ FQL DDLLD D KK Sbjct: 174 GAALQTGAWIGGAGEEDAQLLYDFGINIGLAFQLKDDLLDVYGDEATFGKK 224 >gi|319941604|ref|ZP_08015928.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B] gi|319804834|gb|EFW01688.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B] Length = 296 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 13/231 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67 ++E + + +L QT RL+ A+RY+LLGG K+IR L ++ Sbjct: 1 MKERVSHFEWFAEKMLPQTGI-----GAKRLVGAMRYSLLGGGKRIRPLLCYAAGAVSGA 55 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 R A+E IH YSL+HDD+PSMDN +RRG+ T H++Y E A++AG+ L T A Sbjct: 56 PEEVLDRAALALEMIHSYSLVHDDMPSMDNDTLRRGRATTHVRYGEAMAMLAGDALQTEA 115 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185 F ++SSP + +L+ +L G+ GM GGQ LD + + ++ +Q MKT Sbjct: 116 FTVLSSP--SVPPEAAQRLVQTLARAAGVWGMCGGQALDLEMVGQKPGAAELSRMQAMKT 173 Query: 186 GALMCFACESGA---IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GA++ A GA I K L + + LG+ FQ+ DD+LDC +D Sbjct: 174 GAMIMAAVLMGAQSGIWTALGDQAKAGLAAYADALGVAFQVVDDILDCTQD 224 >gi|310779233|ref|YP_003967566.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926] gi|309748556|gb|ADO83218.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926] Length = 294 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 124/235 (52%), Gaps = 9/235 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L+E + ID + + L ++ + ++YA+L GGK++R L+ Sbjct: 2 LKNYLKEKREIIDESVKNYLDDL------KYPKVIADGMKYAVLNGGKRLRPILLLMTLK 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + AIE IH YSL+HDDLP++D+ RRGK T H +Y E I+ G+ L Sbjct: 56 LLGEREEKGIPAAVAIEMIHSYSLVHDDLPALDDDDYRRGKLTTHKKYGEAQGILIGDAL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT+AF +++S ++ ++ + G+ GM+GGQM+DI+ E ID + I Sbjct: 116 LTHAFNVLTSKDQEIDAQKIVDIVRLTSQYAGVNGMIGGQMVDIESEGKSIDLPVLQYIH 175 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTG ++ E I+A +KE+L + E +G+ FQ+ DD+LD E D K Sbjct: 176 THKTGKMISLPVEVACIIAGIEGEKKEKLIEYSELIGLAFQIKDDILDIEGDFEK 230 >gi|308388479|gb|ADO30799.1| geranyltranstransferase [Neisseria meningitidis alpha710] gi|325130987|gb|EGC53714.1| geranyltranstransferase [Neisseria meningitidis OX99.30304] gi|325137086|gb|EGC59682.1| geranyltranstransferase [Neisseria meningitidis M0579] gi|325202912|gb|ADY98366.1| geranyltranstransferase [Neisseria meningitidis M01-240149] gi|325207289|gb|ADZ02741.1| geranyltranstransferase [Neisseria meningitidis NZ-05/33] Length = 298 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 76/237 (32%), Positives = 118/237 (49%), Gaps = 8/237 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA+L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAVLDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 + L T AF+++S P + +L+ L + + + + Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|56695234|ref|YP_165582.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3] gi|56676971|gb|AAV93637.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3] Length = 332 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 16/232 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + L + ++ ++ + M ++H R+ + + GGK++R L A Sbjct: 13 LAATLSQEMAAVNALI-------RTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 65 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L Sbjct: 66 LCGYQGEDHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 +F+++ + +R +L+ +G + QM D DE+ + + Sbjct: 124 FARSFQLMVETGS-----LRVLDILANAAATIAEGEVL-QMTAASDLRTDESVYLQVVRG 177 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL A E G ++A + + L +G+ LGI FQ+ADDLLD + D Sbjct: 178 KTAALFSAATEVGGVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAK 229 >gi|241760794|ref|ZP_04758885.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114] gi|241318691|gb|EER55243.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114] Length = 324 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 112/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L ++ +++ +++ + Q+ + +Q ++SA GGK++R + Sbjct: 8 FQRHLPDDLAKVNAVINQAV-QSDVALISQIGTYIISA------GGKRLRPIITILAGKA 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 VGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + +R +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEQYVQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD + Sbjct: 173 TAKLFEAAAQVGAILGKASTEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223 >gi|168818966|ref|ZP_02830966.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344074|gb|EDZ30838.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084699|emb|CBY94490.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 299 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 92/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ + + L + N ++ A++Y ALLGGK++R FLV Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+ Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF IIS P ++ D R ++ L + G+ GM GGQ LD+ E I + Sbjct: 117 LQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDHYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|114326884|ref|YP_744041.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1] gi|114315058|gb|ABI61118.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1] Length = 309 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 91/234 (38%), Positives = 140/234 (59%), Gaps = 9/234 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L L + ++ LD LL + R++ A+RYA+L GGK++R+FLV E Sbjct: 15 SALKEALTRRAHEVEAALDRLLP-----VPPGPESRVVEAMRYAVLNGGKRLRAFLVLES 69 Query: 62 ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A+LF + +R A++E +H YSL+HDDLP+MD+ +RRGKP+ H +DE TAI+AG Sbjct: 70 AALFDGAAAESGVRAAASVEMLHAYSLVHDDLPAMDDDDLRRGKPSAHRAFDEATAILAG 129 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + L T AFE+++ T R L+L+L +G GM+GGQM+D+ E + QV Sbjct: 130 DALQTSAFELLADAATHPDPAARCALVLALARAVGADGMVGGQMIDMASEGRALTAEQVG 189 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + +KTG L+ ++ E+G I+ A+ ++E L +G +LG FQ+ DD+LD E Sbjct: 190 RLHALKTGRLIQYSAEAGGILGAATPAQQEALASYGRDLGAAFQIVDDILDTEG 243 >gi|238024940|ref|YP_002909172.1| polyprenyl synthetase [Burkholderia glumae BGR1] gi|237879605|gb|ACR31937.1| Polyprenyl synthetase [Burkholderia glumae BGR1] Length = 294 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 75/235 (31%), Positives = 118/235 (50%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L T L A+RYA++GG K++R L Sbjct: 3 FQQWMRAVLARVEDALGHYLP-----ADTVVPGTLHEAMRYAVMGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + + AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGASEAASNAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 + AF ++ L ++ L+ L G GM GGQ +D+ + + Q+ + Sbjct: 118 QSQAFVALTDAAA-LSPQQQAALVRELALASGSIGMAGGQAIDLASVGQMLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ + GA+ + + L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRASVRMGALAGETPTADTMRALDAYAAAVGLAFQVVDDILDVTTDSA 231 >gi|300309704|ref|YP_003773796.1| octaprenyldiphosphate synthase [Herbaspirillum seropedicae SmR1] gi|300072489|gb|ADJ61888.1| octaprenyldiphosphate synthase protein [Herbaspirillum seropedicae SmR1] Length = 309 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 15/219 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 + ++ ++ L + Q + ++SA GGK++R LV A+ F Sbjct: 2 EAVNAVIRRQLYSEVP-LVNQVAEYIISA------GGKRLRPVLVVLIANAFGYKGEHHH 54 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ L + AF+++ + Sbjct: 55 SLAAVIEFIHTATLLHDDV--VDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVA 112 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 N R +++ N+ +G + Q+L++ + +DE + + KT L A Sbjct: 113 VG-----NPRVMEIVADATNVIAEGEVL-QLLNMHNPDVDENGYLQVIRSKTAKLFEAAS 166 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + GA++A A + E +G ++G FQL DD+LD Sbjct: 167 QIGALIAGADEAGIEAAAEYGRSIGTAFQLIDDVLDYSG 205 >gi|224536141|ref|ZP_03676680.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus DSM 14838] gi|224522223|gb|EEF91328.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus DSM 14838] Length = 324 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 12/219 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +L++ A T+ L + + Y L +GGK+IR L+ +L+ + Sbjct: 6 ELLENFNSHIAGLQFTRTPKGLYAPVEYVLSMGGKRIRPVLMLLAYNLYKEDVTRIYAPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A++ ++ + Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAECPS 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 + L+ + GQ +D++ E + + + ++KT L+ + Sbjct: 124 TFLKEVMDLFSLT------ALEICEGQQMDMEFEQRNDVTAEEYLEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + GA + AS + +RL FG ++G+ FQL DDLLD Sbjct: 178 KIGARLGGASVEDADRLYDFGMHIGVAFQLKDDLLDVYG 216 >gi|149195157|ref|ZP_01872248.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2] gi|149134709|gb|EDM23194.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2] Length = 278 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 80/220 (36%), Positives = 127/220 (57%), Gaps = 7/220 (3%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAA 78 +++ + + + T H + + L GGK+ R L+ +N A A Sbjct: 1 MEEFIKKNLIKLNTFHPNFEKALNEMLLAGGKRFRPKLLISVVKAYNPLLIDNAKYAAFA 60 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE IH YSLIHDDLP+MD+ +RRG PT+H YDE TAI+ G+GL TYAFE++S K + Sbjct: 61 IELIHTYSLIHDDLPAMDDATLRRGHPTLHTTYDEATAILVGDGLNTYAFEVLS--KAPI 118 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESG 196 ++I+ +L+ L+ N G+ GM+ GQ +D +++ ++ ++ + KT L+ + + G Sbjct: 119 HNDIKIELIKILSENAGVSGMVLGQAIDLYFENKKLNLDELKELHINKTAKLIAASLKMG 178 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 AI+ + + E+L FG LG++FQ+ DDLLD E D K Sbjct: 179 AIIVN-KIDLAEKLYDFGIKLGLLFQIQDDLLDLE-DETK 216 >gi|313897461|ref|ZP_07831004.1| geranyltranstransferase [Clostridium sp. HGF2] gi|312957831|gb|EFR39456.1| geranyltranstransferase [Clostridium sp. HGF2] Length = 280 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 75/224 (33%), Positives = 118/224 (52%), Gaps = 10/224 (4%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78 + D + + T + R+ A++Y+L+ GGK+IR L+ + V AA Sbjct: 1 MSDFESYLSHCLDTLEHSRVREAMQYSLMAGGKRIRPRLLLAVLRAYGFEETIGYPVAAA 60 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE IH YSLIHDDLP+MDN +RRG PT H+++ E AI+AG+ LLT AF ++ Sbjct: 61 IEMIHTYSLIHDDLPAMDNDTLRRGMPTCHVKFGEDVAILAGDALLTQAFYTAAACT--C 118 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACES 195 + + +++ L+ G GM+ GQ+ D++ E ID + +I KTG L+ Sbjct: 119 RAEVLVEILKLLSEFSGANGMILGQIKDLEGEANPGIDHAGLQVIHYYKTGRLLSLPLVC 178 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 A++A + + G + G+ FQ+ DD+LD E+L K Sbjct: 179 AALLAGH-REDAAVWERIGADTGLSFQIQDDILDVTSTVEELGK 221 >gi|77409329|ref|ZP_00786032.1| geranyltranstransferase [Streptococcus agalactiae COH1] gi|77172061|gb|EAO75227.1| geranyltranstransferase [Streptococcus agalactiae COH1] Length = 290 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 77/224 (34%), Positives = 121/224 (54%), Gaps = 9/224 (4%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGA 77 +D+ + + + + L+ AI Y++ GGK+IR ++ E F V V A Sbjct: 7 IDEAIHRHYKQTHSVVSPDLIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYDVAA 66 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SLIHDDLP+MDN RRG+ T H ++DE TA++AG+ L F+++ + Sbjct: 67 ALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKAGFK 126 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195 +R +LS++ G GM+GGQMLD++ E + + +I KTG L+ + + Sbjct: 127 ADVTVRLIELLSMS--AGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLAYPFXA 184 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 I+A S+ K +L G +G FQ+ DD+LD E+L K Sbjct: 185 AGILAEKSEEVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGK 228 >gi|86140814|ref|ZP_01059373.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella blandensis MED217] gi|85832756|gb|EAQ51205.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella blandensis MED217] Length = 324 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 12/223 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 RID + + + + L I Y L LGGK++R L +F +H AL Sbjct: 3 RIDQYTEVFVAYLNDKLAIKEPANLYEPIHYILQLGGKRLRPVLTLMATDIFESDHQKAL 62 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 A+E H +SL+HDD+ MD+ +RRG+ TVH ++D T I++G+ +L A+++ + Sbjct: 63 DAALAVEVFHNFSLVHDDI--MDDAPLRRGEETVHEKWDVNTGILSGDAMLIRAYQLFEN 120 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190 + + L+ + + GQ D+ E D+ + + + KT L+ Sbjct: 121 YEGETF------RALAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVG 174 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A + GAI+A+AS R+ +G +LGI FQL DD LD D Sbjct: 175 AALKMGAIVANASAENANRIYEYGRDLGIAFQLQDDYLDAFGD 217 >gi|268592056|ref|ZP_06126277.1| geranyltranstransferase [Providencia rettgeri DSM 1131] gi|291312449|gb|EFE52902.1| geranyltranstransferase [Providencia rettgeri DSM 1131] Length = 305 Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 91/243 (37%), Positives = 132/243 (54%), Gaps = 13/243 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 + ++ R++ L D L + N L A+RY LLGGK++R FL Sbjct: 7 DSFTQQQKQAYDRVNQYLLDAL-----NALPFANLPLAQAMRYGTLLGGKRLRPFLTYAI 61 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 S+F V+ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI+Y E A++AG+ Sbjct: 62 GSMFGVSQENLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKYGEGNAVLAGD 121 Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L T AF+++SS P + D R ++ L++ GL GM GGQ LD+ E +D + Sbjct: 122 ALQTLAFQLLSSAPMPDVTDKDRIAMIAELSYASGLAGMCGGQALDLDAEGKQVDLESLE 181 Query: 179 MIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234 I + KTGAL+ A GA A Q L + +++G+ FQ+ DD+LD D Sbjct: 182 RIHQHKTGALIRAAIRLGAFAAGEKGQQLLPVLDKYAQSIGLAFQVQDDILDVIGDSEVT 241 Query: 235 PKK 237 K+ Sbjct: 242 GKR 244 >gi|161504393|ref|YP_001571505.1| geranyltranstransferase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865740|gb|ABX22363.1| hypothetical protein SARI_02504 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 299 Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 92/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ + + L + N ++ A++Y ALLGGK++R FLV Sbjct: 2 DFMQQLQACVSQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+ Sbjct: 57 QMFGVSTATLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF IIS P ++ D R ++ L + G+ GM GGQ LD+ E I + Sbjct: 117 LQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGHQISLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media] Length = 180 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 66/177 (37%), Positives = 101/177 (57%), Gaps = 5/177 (2%) Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 +RY+LL GGK++R L L + A+ A+E IH SLIHDDLP MDN R Sbjct: 1 MRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFR 60 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGML 160 RGKPT H + E TA++AG+ LL++AFE I+ ++ + R+ ++S I QG++ Sbjct: 61 RGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELGKTISSQGLV 120 Query: 161 GGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 GGQ++DI E +D + I KT L+ + +G I+ A+++E R+R + Sbjct: 121 GGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVNGGILGGATEDEIARIRRYA 177 >gi|198276974|ref|ZP_03209505.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135] gi|198270499|gb|EDY94769.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135] Length = 327 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 14/228 (6%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 + +L + + + L I Y L LGGK++R L+ +L+ + Sbjct: 7 EQLLQQIHEYIGNLSYMREPMGLYDPIEYVLGLGGKRLRPVLMLLAYNLYKEDVTRIFSQ 66 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A IE H ++L+HDDL MD +RR KPTVH ++DE TAI++G+ +L A++ + + Sbjct: 67 AAGIETYHNFTLLHDDL--MDKADMRRNKPTVHKKWDENTAILSGDAMLILAYQFMMK-E 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 L+ R + T + GQ D++ E + + + ++KT L+ A Sbjct: 124 CPLECVERVMEVFGRT----ALEVCEGQQWDMEFEHRLDVTVDEYIEMIRLKTSVLLAAA 179 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GAI+ A + + + L FG +G+ FQL DD LD D KK Sbjct: 180 LKIGAILGGAPEKDAQLLYDFGIKMGLAFQLQDDYLDVYGDPAVFGKK 227 >gi|329118546|ref|ZP_08247250.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC BAA-1200] gi|327465281|gb|EGF11562.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC BAA-1200] Length = 324 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R + + + A +E IH +L+HDD+ +D +RRG+ T Sbjct: 44 AGGKRLRPIITILAGKSLGYDGDPLYSLAAMVEFIHTSTLLHDDV--VDESDMRRGRETA 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + A++ G+ L T AF+++ + ++ +++ NI +G + Q+++I Sbjct: 102 NNLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MKILEVMADATNIIAEGEVM-QLMNI 155 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + I ET+ + + KT L A + GAI+A AS ++ LR +G +G FQ+ DD+ Sbjct: 156 GNTDISETEYLRVIQYKTAKLFEAAAQVGAILAGASAEQEAALRDYGMYVGTAFQIVDDI 215 Query: 228 LDCEED 233 LD D Sbjct: 216 LDYCGD 221 >gi|220904228|ref|YP_002479540.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868527|gb|ACL48862.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 298 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 86/237 (36%), Positives = 126/237 (53%), Gaps = 12/237 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 + L+E + ++ L L A RL ++ Y+L GGK++R L Sbjct: 6 SRMKELLRERGQMVEEELAVCLDGRA------VPQRLKDSMLYSLQAGGKRLRPVLCLSA 59 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+L + AL +AIE IH YSL+HDDLP+MD+ +RRGKP+ H +DE TAI+AG+ Sbjct: 60 AALCGLPLRDALPFASAIEMIHTYSLVHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGD 119 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-- 179 GLLT AF ++ ++ L + + L G GM+GGQ D+ D + Sbjct: 120 GLLTDAFLMM--CRSPLAPPRVLRAISELALAAGSSGMVGGQEWDMIFTGKDLVSIEDLR 177 Query: 180 -IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 I MKTGAL+ +C GA++A AS + + +G LG+ FQ+ADD+LD D Sbjct: 178 GIHAMKTGALLRASCVCGAMLAGASDEDLAAIGSYGAALGVAFQIADDILDVVADTA 234 >gi|254447158|ref|ZP_05060625.1| geranyltranstransferase [gamma proteobacterium HTCC5015] gi|198263297|gb|EDY87575.1| geranyltranstransferase [gamma proteobacterium HTCC5015] Length = 297 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 80/236 (33%), Positives = 125/236 (52%), Gaps = 11/236 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 L +R++ ++ L Q + L SA+ Y A GGK++R L A Sbjct: 2 DFKQALAHYQERVNATIERYLPD-----PQQAPEALHSAMHYSATGGGKRVRPLLCYATA 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + AA+E IH YSL+HDDLP+MD+ +RRG+ T HI +DE TAI+AG+ Sbjct: 57 EALGQSAEQVDGAAAALELIHAYSLVHDDLPAMDDDDLRRGQATCHIAFDEATAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF+I++S + D R + + L G+ GM+GGQ +DI E + Q+ Sbjct: 117 LQTLAFDILASDQALTDDPARRLRAVKVLASASGVDGMVGGQAIDIAAEGQQLTLDQLKR 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCEED 233 + +KTGAL+ + + A +A ++ + +RL + E +G+ FQ+ DD+LD D Sbjct: 177 MHALKTGALIRASVQISAALAGEAENGDTYQRLSRYAECIGLAFQIRDDILDVISD 232 >gi|294789130|ref|ZP_06754369.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453] gi|294482871|gb|EFG30559.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453] Length = 324 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 111/228 (48%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L+ + R++ +++ + Q+ + +Q ++ A GGK++R L Sbjct: 8 FQQNLEHDLSRVNLVVNQAV-QSDVALISQIGTYIIGA------GGKRLRPILTILSGKC 60 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L Sbjct: 61 LGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + ++ +++ NI +G + Q+++I + I E Q + + K Sbjct: 119 TRAFQLMVGSGS-----LKILEVMADATNIIAEGEVM-QLMNIGNIDITEAQYLQVIQYK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T L A + GAI+A A+ ++ L+ FG +G FQ+ DD+LD Sbjct: 173 TAKLFEAAAQVGAILAGATHEQETALKNFGMYMGTAFQIIDDVLDYSG 220 >gi|283784240|ref|YP_003364105.1| geranyltranstransferase [Citrobacter rodentium ICC168] gi|282947694|emb|CBG87249.1| geranyltranstransferase [Citrobacter rodentium ICC168] Length = 299 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 90/242 (37%), Positives = 132/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ ++ + L + N ++ A++Y ALLGGK++R FLV Sbjct: 2 DFTRQLQVCVEQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 KMFGVSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF IIS P ++ D R ++ L + G+ GM GGQ LD+ E + + Sbjct: 117 LQTLAFTIISDAPMPEVTDRDRIAMISELANASGIAGMCGGQALDLDAEGRQVPLAALEK 176 Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGEKGRNVLPILDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|329957776|ref|ZP_08298251.1| polyprenyl synthetase [Bacteroides clarus YIT 12056] gi|328522653|gb|EGF49762.1| polyprenyl synthetase [Bacteroides clarus YIT 12056] Length = 324 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 19/229 (8%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69 E ++I++ + DL + L I Y L +GGK+IR L+ +L+ N Sbjct: 6 ELLEKINSHIADLRF-------VRSPKGLYDPITYVLSMGGKRIRPVLMLMAYNLYKENV 58 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A IE H Y+L+HDDL MD RRGK TVH +++ AI++G+ +L A++ Sbjct: 59 EPAFSSATGIEVYHNYTLLHDDL--MDRADKRRGKETVHKVWNDNAAILSGDAMLVLAYQ 116 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTG 186 ++ ++ + ++ + GQ +D++ E + E + + ++KT Sbjct: 117 FMAQCP------VKHLKEVMDLFSLTAFEICEGQQMDMEFEQRNDVKEEEYLEMIRLKTS 170 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + + GA++ AS ++ RL FG N+G+ FQL DDLLD D Sbjct: 171 VLLAASLKIGALLGGASADDAARLYDFGMNMGVAFQLKDDLLDVYGDAA 219 >gi|218282379|ref|ZP_03488661.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989] gi|218216665|gb|EEC90203.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989] Length = 280 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 79/220 (35%), Positives = 114/220 (51%), Gaps = 10/220 (4%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75 + +D LL +Q + R A+ Y+L+ GGK++R L+ + ++ Sbjct: 2 NKEFEDYLL---VRVQENDDSRTKDAMAYSLMNGGKRVRPMLLFSVLEGYGMDAHVGYPC 58 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AIE IH YSL+HDDLP+MDN +RRGKP+ H YDE TAI+AG+GLLT AFE++ + Sbjct: 59 ACAIEMIHTYSLVHDDLPAMDNDDLRRGKPSCHKAYDEATAILAGDGLLTKAFEVVLDSE 118 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMCFA 192 K + LS G+ GM+ GQ LD+Q E + I KT L+ Sbjct: 119 CSAKQKVALVKALSWY--AGIDGMIYGQTLDLQAENDTNPTFALLQEIDHYKTSKLLTLP 176 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G I+A+ + + R G LG+ FQ+ DD+LD Sbjct: 177 LVCGCILANKFDD-IDHFRKIGLVLGLEFQMQDDILDVVG 215 >gi|15967020|ref|NP_387373.1| geranyltranstransferase protein [Sinorhizobium meliloti 1021] gi|307302488|ref|ZP_07582245.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C] gi|307316182|ref|ZP_07595626.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83] gi|15076293|emb|CAC47846.1| Probable geranyltranstransferase [Sinorhizobium meliloti 1021] gi|306898022|gb|EFN28764.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83] gi|306903158|gb|EFN33748.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C] Length = 304 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 112/236 (47%), Positives = 158/236 (66%), Gaps = 3/236 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 P++L+ N+ ++ +L+ LL + LL A+R+ L GGK++R FLV E Sbjct: 6 SSFPARLKTNAVAVEALLETLLGPAVGTGEIARPANLLGAMRHGVLNGGKRLRPFLVAES 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +L + ALR GAA+ECIHCYSL+HDDLP+MD+ +RRGKPTVH+ +DE TAI+AG+ Sbjct: 66 TALLGGDAEAALRTGAALECIHCYSLVHDDLPAMDDDDMRRGKPTVHVAFDEATAILAGD 125 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179 LLT+AF+I+++P+T L D ++ L+L+L G GM GGQ LD+ E DE + + Sbjct: 126 SLLTFAFDIVAAPETALSDRQKTTLVLALARAAGHGGMAGGQALDLAAEKSAPDEAGIVL 185 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GAI+A A ++ RLR FG+ +G+ FQLADDLLD D Sbjct: 186 LQSMKTGALIRFACEAGAIIADAPAEDRRRLRAFGDKIGLAFQLADDLLDLTADAA 241 >gi|238852560|ref|ZP_04642970.1| farnesyltranstransferase [Lactobacillus gasseri 202-4] gi|238834706|gb|EEQ26933.1| farnesyltranstransferase [Lactobacillus gasseri 202-4] Length = 288 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 24/246 (9%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN L ++ + +ID L+D L N + Y+++ GGK++R L Sbjct: 1 MN--LKDFQKKYTPQIDKFLEDHLASEVD------NPIFSKIMSYSVMAGGKRLRPLLFL 52 Query: 60 ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 N + LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+ Sbjct: 53 ATLETLNYKISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHRKWGEAEAIL 112 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-- 176 AG+ LL + I+ + L + ++ +G GM+GGQ LDI D + Sbjct: 113 AGDALLPLGIQWITEGSNS------AALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKEN 166 Query: 177 ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230 + ++ +KTG L+ + + A+ A AS +E +RL F + G +Q+ DDL+D Sbjct: 167 AKVIDQMEWLKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVET 226 Query: 231 EEDLPK 236 E++ K Sbjct: 227 EQEAGK 232 >gi|256821709|ref|YP_003145672.1| polyprenyl synthetase [Kangiella koreensis DSM 16069] gi|256795248|gb|ACV25904.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069] Length = 296 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 87/231 (37%), Positives = 128/231 (55%), Gaps = 10/231 (4%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66 +L+ R+ IL+ L + + L A+RY AL GGK+IR LV Sbjct: 6 QLEHWQDRVFKILNTRLPSDDT-----NPQSLHQAMRYGALNGGKRIRPTLVYMTGQALG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A+E IHCYSL+HDDLP+MD+ +RRGKPT HIQ+ E TAI+AG+ L T Sbjct: 61 AELIDLDSPALAVELIHCYSLVHDDLPAMDDDDLRRGKPTCHIQFGEATAILAGDALHTQ 120 Query: 127 AFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM 183 AFE ++S K + Q++ L G GM GGQ +D++ + ID + + +M Sbjct: 121 AFEELASHPFSAKAQPQQLQMIQLLAQASGSLGMGGGQAIDLESTSKIIDLATLEQMHRM 180 Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ + GA+ A +Q E++ L + + +G+ FQ+ DD+LD E D Sbjct: 181 KTGALIKASVLLGALCAGKLNQLEQDALERYADAIGLAFQVKDDILDIESD 231 >gi|218682196|ref|ZP_03529797.1| Polyprenyl synthetase [Rhizobium etli CIAT 894] Length = 304 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 119/236 (50%), Positives = 164/236 (69%), Gaps = 3/236 (1%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 ++L+ N+ I+ +LD LL + + L SA+ YA+L GGK++R FLV E Sbjct: 6 DTFETRLKHNAHEIEALLDILLSPATLSDEIARPETLRSAMHYAVLNGGKRMRPFLVVES 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+LF + ALRVGAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TAI+AG+ Sbjct: 66 AALFGGDAGAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGD 125 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 LLTYAF+II++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + Sbjct: 126 SLLTYAFDIIAAPETALPDTSKAALVLALARAAGLGGMAGGQALDLAAERQAPDEAGIIR 185 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GAI++ S +++ RLR FGE +G+ FQLADD+LD D Sbjct: 186 LQAMKTGALIRFACEAGAIISAGSPDDRLRLRAFGEKIGLAFQLADDILDLTSDTA 241 >gi|254674120|emb|CBA09904.1| geranyltranstransferase [Neisseria meningitidis alpha275] Length = 298 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 74/237 (31%), Positives = 116/237 (48%), Gaps = 8/237 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKTWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G Sbjct: 59 ASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 + L T AF+++S P + +L+ L + + + + Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|154244163|ref|YP_001415121.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2] gi|15553715|gb|AAL01997.1|AF408846_1 farnesyl diphosphate synthase [Xanthobacter autotrophicus Py2] gi|154158248|gb|ABS65464.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2] Length = 308 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 101/250 (40%), Positives = 150/250 (60%), Gaps = 13/250 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L +L ++ + L L A + +RL++A+R+ AL GGK++R FLV Sbjct: 1 MTFSLKDRLDASAAATEARLALALADAALPGERLRPERLMAAMRHGALGGGKRLRPFLVI 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E A+LF + A+ AIECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE TAI+A Sbjct: 61 ESAALFGIPADQAVTAATAIECIHCYSLVHDDLPAMDDDDLRRGRPTVHRAFDEATAILA 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-------- 171 G+GLLT AF++++ +R L+ +L G+ GM+GGQMLD+ E Sbjct: 121 GDGLLTLAFDLLAGEDAHPDPAVRIALVRALARASGIGGMVGGQMLDLAAEGRFSGGTPL 180 Query: 172 -IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + E + +Q MKTGAL+ + E+GA++ A+ +E+ L +G LG FQ+ADD+LD Sbjct: 181 ALAEDAIRDLQAMKTGALLAVSVEAGALLGGATADERAALLAYGRALGAAFQIADDILDV 240 Query: 231 EE---DLPKK 237 E ++ KK Sbjct: 241 EGTAEEVGKK 250 >gi|149913258|ref|ZP_01901792.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b] gi|149813664|gb|EDM73490.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b] Length = 333 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 9/225 (4%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 ++ ++ +D+ + + M ++H R+ + + GGK++R L A + Sbjct: 12 EQLARHLDSKMAAVNTLIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLTLATADMCGYG 71 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L AF Sbjct: 72 GAFDVHLAATVEFIHTATLLHDDV--VDESQQRRGRPTANLLWDNKSSVLVGDYLFARAF 129 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 +++ P N+R +LS + +G + Q+ +D DE + + KT AL Sbjct: 130 QLMVEPG-----NLRVLDILSNAAAVIAEGEVL-QLSAARDLKTDENIYLQVVRGKTAAL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A E G ++A A + + + L +G+ LGI FQ+ DDLLD + D Sbjct: 184 FSAATEVGGVIADAPEAQIKALFDYGDALGIAFQIVDDLLDYQGD 228 >gi|152980282|ref|YP_001354685.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille] gi|151280359|gb|ABR88769.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille] Length = 334 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 117/235 (49%), Gaps = 18/235 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + +DT++ L + + Q D ++SA GGK+IR LV A+ Sbjct: 18 LIQPIAADLNAVDTVIRQKLHSEVA-LVNQIADYIISA------GGKRIRPVLVLLMANA 70 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + ++ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 71 YGYRGTDHHQLAAVVEFIHTATLLHDDV--VDESSLRRGRKTANALFGNAASVLVGDFLY 128 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + AF+++ S +IR +L+ N+ +G + Q+L++ D + E + + + K Sbjct: 129 SRAFQMMVSVG-----DIRIMQILADATNVIAEGEVL-QLLNMHDPDVSEERYTQVIRSK 182 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 T L A + G ++A AS +E E +G +LG FQL DD+LD D+ K Sbjct: 183 TAKLFEAAAQLGTLIAGASDDEIEAAAEYGRSLGTAFQLIDDVLDYSGQADDIGK 237 >gi|296113743|ref|YP_003627681.1| geranyltranstransferase [Moraxella catarrhalis RH4] gi|295921437|gb|ADG61788.1| geranyltranstransferase [Moraxella catarrhalis RH4] gi|326562092|gb|EGE12420.1| geranyltranstransferase [Moraxella catarrhalis 7169] gi|326565728|gb|EGE15891.1| geranyltranstransferase [Moraxella catarrhalis 12P80B1] gi|326566295|gb|EGE16447.1| geranyltranstransferase [Moraxella catarrhalis 103P14B1] gi|326568317|gb|EGE18397.1| geranyltranstransferase [Moraxella catarrhalis BC7] gi|326574560|gb|EGE24500.1| geranyltranstransferase [Moraxella catarrhalis O35E] gi|326576140|gb|EGE26055.1| geranyltranstransferase [Moraxella catarrhalis CO72] Length = 348 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 108/217 (49%), Gaps = 16/217 (7%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTEC----------ASLFNVNHLTALRVGAAIECIHC 84 + L A RYA+ GGK++R LV R A+E IH Sbjct: 74 PEPLNKACRYAMSNGGKRVRPLLVLSTFLTLIKTGHQTDDLTKKIQMLFRAMMAVELIHS 133 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSLIHDDLP MD+ +RRG+PT HI Y E A++AG+ L + AFE++ + + Sbjct: 134 YSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALLAGDALQSIAFEVLFECYDKNSADDAI 193 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA 202 L+ + + M+ GQMLDI+ E + + ++ I + KTGAL+ A GAI A Sbjct: 194 AYKLAKLLSCRARRMVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICADV 253 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + L+ + +G+ FQ+ DD+LD D L K Sbjct: 254 QTDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGK 290 >gi|332184586|gb|AEE26840.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida 3523] Length = 293 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 9/222 (4%) Query: 17 DTILDDL--LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 + I+ D + + L+ A+ Y+ GGK+IR+ V ++ Sbjct: 4 ENIIKDFEIFAKNVFAQFDCVSKTLIKAMHYSFFSGGKRIRAQFVYAIGEALAIDKADCD 63 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +V AIE IH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L + AFEI+ Sbjct: 64 KVAFAIESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQSLAFEILQD 123 Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 D R + + G GM+GGQ LDI+ E ++ ++ ++ KT + Sbjct: 124 IN--CSDIARLKKINKFFAQCCGADGMVGGQQLDIEGENKKLNLEELQILHTNKTAKMFR 181 Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCE 231 I++ +E E L + +G+ FQ+ DD+LD Sbjct: 182 ACIVLPYILSQNQNDEIENLLVKLADLIGLCFQIKDDILDVT 223 >gi|186940997|dbj|BAG31127.1| geranyltranstransferase [Xanthomonas perforans 91-118] Length = 291 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 1/209 (0%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L+ T RL +A+R+A+LGG K++R LV +LF A+E IH Sbjct: 17 LEAGLPRATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIH 76 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ + + Sbjct: 77 AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLATASASAELRVS 136 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ +D + + + +KTGAL+ A GA+ A+ Sbjct: 137 WMQSLATAAGAAGMCGGQALDIDATGQLQSLQDLQRMHALKTGALIRAAVRMGALTGCAA 196 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232 +++RL F + LG+ FQ+ DD+LD E Sbjct: 197 AADQQRLDEFADALGLAFQVRDDILDVES 225 >gi|187476774|ref|YP_784798.1| octaprenyl-diphosphate synthase [Bordetella avium 197N] gi|115421360|emb|CAJ47865.1| octaprenyl-diphosphate synthase [Bordetella avium 197N] Length = 321 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 113/234 (48%), Gaps = 16/234 (6%) Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59 MN L + + ++ K +D ++ + L ++T + + + GGK++R +V Sbjct: 1 MNLPALIAPITDDMKAVDAVIRERLNSEVVLIRTIGDYIIGA-------GGKRMRPAMVL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A +E IH +L+HDD+ +D +RRG+ T + + +++ Sbjct: 54 MVARALGYEGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETANAVFGNAASVLV 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + +FE++ + +R +LS + +G + Q+L++ D + + + Sbjct: 112 GDYLYSRSFEMMVEANS-----MRIMQILSEATTVIAEGEVL-QLLNVHDPEVSQERYLQ 165 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KT L A + GA++A A+ ++ +G ++G FQL DD+LD D Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHIGTAFQLIDDVLDYSGD 219 >gi|134292965|ref|YP_001116701.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4] gi|134136122|gb|ABO57236.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4] Length = 294 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L +L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----ADNVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L ++ L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVALTDADA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S + L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGETPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSA 231 >gi|148260202|ref|YP_001234329.1| polyprenyl synthetase [Acidiphilium cryptum JF-5] gi|326402853|ref|YP_004282934.1| geranyltranstransferase [Acidiphilium multivorum AIU301] gi|146401883|gb|ABQ30410.1| farnesyl-diphosphate synthase [Acidiphilium cryptum JF-5] gi|325049714|dbj|BAJ80052.1| geranyltranstransferase [Acidiphilium multivorum AIU301] Length = 301 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 98/220 (44%), Positives = 141/220 (64%), Gaps = 8/220 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 I+T LD LL + L+ A+RYA+L GGK++R FLV E A LF+VN A+R Sbjct: 21 IETELDVLLP-----LPEGEERPLVEAMRYAVLGGGKRMRGFLVIETARLFSVNITCAVR 75 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V AA+E +H YSL+HDDLP+MD+ +RRGKP+ H +DE TAI+AG+ L T AFE+++ P Sbjct: 76 VAAAVEMLHAYSLVHDDLPAMDDDDLRRGKPSCHKAFDEATAILAGDALQTRAFEVLAEP 135 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFA 192 T +R +L+L+L G +GM+GGQM+DI E + +Q +KTG L+ F+ Sbjct: 136 DTHSDPEVRCELVLALAAASGARGMVGGQMIDIVSEGRQLEPPVITRLQALKTGRLIQFS 195 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 E+GAI+ A ++ + +G +LG FQ+ADD+LD E Sbjct: 196 AEAGAILGRAPGPQRHHIAGYGRDLGAAFQIADDILDEEG 235 >gi|224823689|ref|ZP_03696798.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] gi|224604144|gb|EEG10318.1| Polyprenyl synthetase [Lutiella nitroferrum 2002] Length = 360 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 S L ++ + +D ++ L ++ Q + ++SA GGK++R L Sbjct: 44 FRSLLADDMQTVDRVIRARLHSDVVLIR-QVAEYIISA------GGKRLRPVLTLLAGKA 96 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A IE IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 97 LDYRGEHLHELAAMIEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDFLY 154 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ + + N+ +++ NI +G + Q+L+I + + E Q + + K Sbjct: 155 TRAFQMMVTTR-----NMAILEVMAEATNIIAEGEVL-QLLNIGNTDVTEAQYLQVIQYK 208 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L A GA++A AS +++ L +G +LG FQ+ DD+LD D Sbjct: 209 TAKLFEAASRVGALIAAASPEQEKALADYGMHLGTAFQIIDDVLDYSGDAE 259 >gi|119472098|ref|ZP_01614329.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Alteromonadales bacterium TW-7] gi|119445118|gb|EAW26411.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Alteromonadales bacterium TW-7] Length = 295 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 84/234 (35%), Positives = 126/234 (53%), Gaps = 9/234 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + ++ + T L+ Q + + A Y+L GGK++R FLV Sbjct: 2 SIKDYIERAQIDVATTLNSYFEQ-----PLDSDKTIKEATHYSLFNGGKRLRPFLVYAVG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + AAIECIH YSL+HDDLP+MD+ +RRG PT HI Y E AI+AG+ Sbjct: 57 EMLGAKKSDLDVLAAAIECIHSYSLVHDDLPAMDDDDLRRGYPTCHIVYGEAQAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180 L T AFE+I++ + +++ +L H G++GM+ GQ LDI D+ + ++ I Sbjct: 117 LQTLAFELIATHNFNCSAQSQVKMIAALAHASGIEGMVAGQGLDIAATDKVVSVQELERI 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 K+KTGAL+ A GA+ + A + E L FG +G+ FQ+ DD+LD E D Sbjct: 177 HKLKTGALINCAITLGALCSEKADEQTLENLSVFGYAIGLAFQVHDDILDVEGD 230 >gi|300361959|ref|ZP_07058136.1| geranyltranstransferase [Lactobacillus gasseri JV-V03] gi|300354578|gb|EFJ70449.1| geranyltranstransferase [Lactobacillus gasseri JV-V03] Length = 288 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 24/246 (9%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN L + + +ID L+D L N + Y+++ GGK++R L Sbjct: 1 MN--LKDFQKIYTPQIDKFLEDHLASEVD------NPIFSKIMSYSVMAGGKRLRPLLFL 52 Query: 60 ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 N + LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+ Sbjct: 53 ATLETLNYKISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAIL 112 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-- 176 AG+ LL + I+ + L + ++ +G GM+GGQ LDI D + Sbjct: 113 AGDALLPLGIQWITEGSNS------AALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKEN 166 Query: 177 ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230 + ++ +KTG L+ + + A+ A AS ++ +RL F + G +Q+ DDL+D Sbjct: 167 VKVIDQMEWLKTGCLIEASVKMAAVYAGASTDQVDRLDNFSKQFGRSYQIYDDLVDVVET 226 Query: 231 EEDLPK 236 E++ K Sbjct: 227 EQEAGK 232 >gi|167647277|ref|YP_001684940.1| polyprenyl synthetase [Caulobacter sp. K31] gi|167349707|gb|ABZ72442.1| Polyprenyl synthetase [Caulobacter sp. K31] Length = 294 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 99/233 (42%), Positives = 142/233 (60%), Gaps = 6/233 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62 L ++ + + + LD+LL + RL A+RYA LG GK++R F E Sbjct: 3 DLEKRIVQAADIVTVALDELLPRADGP-----ESRLTEAMRYAALGPGKRLRPFFALETG 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F++ LR A+ECIH YSL+HDDLP+MD+ +RRG+PTVHIQYDE TAI+AG+ Sbjct: 58 KMFDLPERPVLRAACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHIQYDEATAILAGDA 117 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L T AFEI++ P T ++RS+L+ L G +GM GGQM+D+ D V +Q+ Sbjct: 118 LQTAAFEIMAHPDTHDDGHVRSELVRKLAIASGAKGMAGGQMIDLLGVRDDLGAVARMQR 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +KTGAL+ FA E I+A A +E+ L F ++LG+ +Q+ DD+LD E D Sbjct: 178 LKTGALIAFAFEIPLIIARAKDSERSALMGFAQDLGLAYQIVDDILDEEGDEA 230 >gi|307129906|ref|YP_003881922.1| geranyltranstransferase [Dickeya dadantii 3937] gi|306527435|gb|ADM97365.1| geranyltranstransferase [Dickeya dadantii 3937] Length = 303 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 86/245 (35%), Positives = 131/245 (53%), Gaps = 14/245 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L +L + +RI+ L+ + + L+ A+ + ALLGGK++R FLV Sbjct: 1 MTDFLK-QLTAHHQRINATLNQFISTL-----PFQSSPLVEAMAHGALLGGKRLRPFLVY 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF ++ AA+ECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+A Sbjct: 55 TTGQLFGISQNNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILA 114 Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ P ++ D R ++ L G+ GM GGQ LD++ E +D Sbjct: 115 GDALQTLAFSILADAPMPEVSDRDRLAMISELASASGVAGMCGGQALDLEAEGHQVDLLA 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEED-- 233 + I + KTGAL+ + GA+ A L + +G+ FQ+ DD+LD D Sbjct: 175 LERIHRHKTGALIRASVRLGALAAGERGRLALPCLDRYANAVGLAFQVQDDILDVIGDSA 234 Query: 234 -LPKK 237 K+ Sbjct: 235 TTGKR 239 >gi|118498042|ref|YP_899092.1| geranyl diphosphate synthase/farnesyl diphosphate synthase [Francisella tularensis subsp. novicida U112] gi|194323267|ref|ZP_03057051.1| geranyltranstransferase [Francisella tularensis subsp. novicida FTE] gi|208779548|ref|ZP_03246893.1| geranyltranstransferase [Francisella novicida FTG] gi|254373397|ref|ZP_04988885.1| geranyltranstransferase [Francisella tularensis subsp. novicida GA99-3549] gi|254374860|ref|ZP_04990341.1| geranyltranstransferase [Francisella novicida GA99-3548] gi|118423948|gb|ABK90338.1| geranyl diphosphate synthase/farnesyl diphosphate synthase [Francisella novicida U112] gi|151571123|gb|EDN36777.1| geranyltranstransferase [Francisella novicida GA99-3549] gi|151572579|gb|EDN38233.1| geranyltranstransferase [Francisella novicida GA99-3548] gi|194322631|gb|EDX20111.1| geranyltranstransferase [Francisella tularensis subsp. novicida FTE] gi|208744509|gb|EDZ90808.1| geranyltranstransferase [Francisella novicida FTG] gi|332678764|gb|AEE87893.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida Fx1] Length = 293 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 7/221 (3%) Query: 17 DTILDDL--LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 + I+ D + + LLSA+ Y+ GGK+IR+ V ++ Sbjct: 4 ENIIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCD 63 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ A+E IH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L AFEI+ Sbjct: 64 KIAFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQD 123 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 D ++ ++ G GM+GGQ LDI+ E + ++ ++ KT + Sbjct: 124 INYSDIDKLK-KINKLFAQYCGASGMVGGQQLDIEGENKKLKLEELQILHTNKTAKMFRA 182 Query: 192 ACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I++ + + ++ L + +G+ FQ+ DD+LD Sbjct: 183 CIVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVT 223 >gi|237730397|ref|ZP_04560878.1| geranyltranstransferase [Citrobacter sp. 30_2] gi|226905936|gb|EEH91854.1| geranyltranstransferase [Citrobacter sp. 30_2] Length = 299 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 88/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ ++ + L + N ++ ++Y ALLGGK++R FLV Sbjct: 2 DFTQQLQACVEQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ T AA+ECIH YSL+HDDLP+MD+ +RRG PT H+++ E AI+AG+ Sbjct: 57 QMFGVSLSTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF IIS P ++ D R ++ L G+ GM GGQ LD++ E ++ + Sbjct: 117 LQTLAFSIISDAPMPEVTDRDRIAMISELAQASGIAGMCGGQALDLEAEGHQVELDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A E L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRECLPILDKYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|33591927|ref|NP_879571.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I] gi|33571571|emb|CAE41057.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I] gi|332381344|gb|AEE66191.1| octaprenyl-diphosphate synthase [Bordetella pertussis CS] Length = 321 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 115/234 (49%), Gaps = 16/234 (6%) Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59 MN L + + ++ K +DT++ D L ++T + + + GGK++R +V Sbjct: 1 MNLPELIAPIADDMKAVDTVIRDRLNSDVVLIRTIGDYIIGA-------GGKRMRPAMVL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A +E IH +L+HDD+ +D +RRG+ T + + +++ Sbjct: 54 MVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLV 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + +FE++ D++R +LS + +G + Q+L++ D + + + Sbjct: 112 GDYLYSRSFEMMVEA-----DSMRIMQILSQATTVIAEGEVL-QLLNVHDPDVSQERYLQ 165 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KT L A + GA++A AS ++ +G ++G FQL DD+LD D Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGASPEQETAAAAYGRHVGTAFQLVDDVLDYSGD 219 >gi|53722784|ref|YP_111769.1| geranyltranstransferase [Burkholderia pseudomallei K96243] gi|76817464|ref|YP_336001.1| geranyltranstransferase [Burkholderia pseudomallei 1710b] gi|126442384|ref|YP_001063528.1| geranyltranstransferase [Burkholderia pseudomallei 668] gi|126458477|ref|YP_001076425.1| geranyltranstransferase [Burkholderia pseudomallei 1106a] gi|134278219|ref|ZP_01764933.1| geranyltranstransferase [Burkholderia pseudomallei 305] gi|167724592|ref|ZP_02407828.1| geranyltranstransferase [Burkholderia pseudomallei DM98] gi|167743543|ref|ZP_02416317.1| geranyltranstransferase [Burkholderia pseudomallei 14] gi|167820731|ref|ZP_02452411.1| geranyltranstransferase [Burkholderia pseudomallei 91] gi|167829090|ref|ZP_02460561.1| geranyltranstransferase [Burkholderia pseudomallei 9] gi|167850567|ref|ZP_02476075.1| geranyltranstransferase [Burkholderia pseudomallei B7210] gi|167899160|ref|ZP_02486561.1| geranyltranstransferase [Burkholderia pseudomallei 7894] gi|167907503|ref|ZP_02494708.1| geranyltranstransferase [Burkholderia pseudomallei NCTC 13177] gi|167915842|ref|ZP_02502933.1| geranyltranstransferase [Burkholderia pseudomallei 112] gi|167923681|ref|ZP_02510772.1| geranyltranstransferase [Burkholderia pseudomallei BCC215] gi|217422667|ref|ZP_03454170.1| geranyltranstransferase [Burkholderia pseudomallei 576] gi|226195863|ref|ZP_03791450.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9] gi|237509552|ref|ZP_04522267.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346] gi|242312765|ref|ZP_04811782.1| geranyltranstransferase [Burkholderia pseudomallei 1106b] gi|254184923|ref|ZP_04891512.1| geranyltranstransferase [Burkholderia pseudomallei 1655] gi|254186152|ref|ZP_04892670.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237] gi|254194119|ref|ZP_04900551.1| geranyltranstransferase [Burkholderia pseudomallei S13] gi|254263700|ref|ZP_04954565.1| geranyltranstransferase [Burkholderia pseudomallei 1710a] gi|254301205|ref|ZP_04968649.1| geranyltranstransferase [Burkholderia pseudomallei 406e] gi|52213198|emb|CAH39238.1| geranyltranstransferase [Burkholderia pseudomallei K96243] gi|76581937|gb|ABA51411.1| geranyltranstransferase [Burkholderia pseudomallei 1710b] gi|126221875|gb|ABN85380.1| geranyltranstransferase [Burkholderia pseudomallei 668] gi|126232245|gb|ABN95658.1| geranyltranstransferase [Burkholderia pseudomallei 1106a] gi|134250003|gb|EBA50083.1| geranyltranstransferase [Burkholderia pseudomallei 305] gi|157811223|gb|EDO88393.1| geranyltranstransferase [Burkholderia pseudomallei 406e] gi|157933838|gb|EDO89508.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237] gi|169650870|gb|EDS83563.1| geranyltranstransferase [Burkholderia pseudomallei S13] gi|184215515|gb|EDU12496.1| geranyltranstransferase [Burkholderia pseudomallei 1655] gi|217394898|gb|EEC34917.1| geranyltranstransferase [Burkholderia pseudomallei 576] gi|225932348|gb|EEH28348.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9] gi|235001757|gb|EEP51181.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346] gi|242136004|gb|EES22407.1| geranyltranstransferase [Burkholderia pseudomallei 1106b] gi|254214702|gb|EET04087.1| geranyltranstransferase [Burkholderia pseudomallei 1710a] Length = 294 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 76/235 (32%), Positives = 119/235 (50%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ +R++T L L T +L A+RYA+LGG K++R L Sbjct: 3 FDQWMRSVLERVETALGHYLP-----AGTVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGASEAARDAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L + ++ L+ L G GM GGQ +D+ + + + Sbjct: 118 QSQAFVALTDAAA-LPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ + GA+ S + L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231 >gi|120555348|ref|YP_959699.1| polyprenyl synthetase [Marinobacter aquaeolei VT8] gi|120325197|gb|ABM19512.1| farnesyl-diphosphate synthase [Marinobacter aquaeolei VT8] Length = 298 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 85/239 (35%), Positives = 134/239 (56%), Gaps = 14/239 (5%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64 + L + ++D LD L + A+ ++RL +RY++LGG K++R L A Sbjct: 9 EAYLDQCRHQVDRELDRCLARNAT------SERLQETMRYSVLGGGKRVRPALCMAAARA 62 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + TAL A+E IH YSL+HDDLP+MD+ +RRG+PT HI +DE +AI+AG+ L Sbjct: 63 MGSDESTALAPACALELIHAYSLVHDDLPAMDDDDLRRGRPTAHIAFDEASAILAGDALQ 122 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182 T AF ++S L D R ++ L G QGM+GGQ +D++ + + Q+ + + Sbjct: 123 TLAFALLSDAPA-LSDRQRVTMISELARASGHQGMVGGQAIDLESVGQQLSVAQLETMHR 181 Query: 183 MKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 KTGAL+ + GA+ + ++ + L + LG+ FQ+ DDLLD E D + K+ Sbjct: 182 HKTGALIEASVRLGALTSETVTECQLSNLTDYASALGLAFQVQDDLLDIEGDTEVIGKR 240 >gi|293652046|pdb|3M9U|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 gi|293652047|pdb|3M9U|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 gi|293652048|pdb|3M9U|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 gi|293652049|pdb|3M9U|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 gi|312208182|pdb|3PDE|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Isoprenyl Diphosphate And Magnesium gi|312208183|pdb|3PDE|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Isoprenyl Diphosphate And Magnesium gi|312208184|pdb|3PDE|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Isoprenyl Diphosphate And Magnesium gi|312208185|pdb|3PDE|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase From Lactobacillus Brevis Atcc 367 Complexed With Isoprenyl Diphosphate And Magnesium Length = 309 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 119/209 (56%), Gaps = 7/209 (3%) Query: 29 SHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN--HLTALRVGAAIECIHCY 85 + + + +L +A+ Y+ L GGK++R L V R A+E +H Y Sbjct: 26 AILADSQDAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTY 85 Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145 SLIHDDLP+MDN +RRG+PT H+++ A +AG+GLLT AF+ +++ T L +++ Sbjct: 86 SLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTA--TDLPATMQAA 143 Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ +L G GM+ GQ DIQ E ++ +Q+ ++ K KTGAL+ +A ++G I+ A Sbjct: 144 LVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAP 203 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + F + G+ FQ+ DD+LD Sbjct: 204 EAQWPAYLQFADAFGLAFQIYDDILDVVS 232 >gi|270263554|ref|ZP_06191823.1| geranyltranstransferase [Serratia odorifera 4Rx13] gi|270042438|gb|EFA15533.1| geranyltranstransferase [Serratia odorifera 4Rx13] Length = 306 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 128/240 (53%), Gaps = 10/240 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 +LQ +R D L D + + +++A+R+ ALLGGK++R FLV Sbjct: 7 QAAFSEQLQAFRQRADRALLDFIAPL-----PFNEGNMVAAMRHGALLGGKRLRPFLVYT 61 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 +F V+ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E +AI+AG Sbjct: 62 TGQMFGVSLNNLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEASAILAG 121 Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 + L T AF I++ + R ++ L G GM GGQ LD++ E ID + Sbjct: 122 DALQTLAFSILADADMPDVALRDRLAMVSELATASGAAGMCGGQSLDLEAEGRQIDLPAL 181 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +I + KTGAL+ A GA+ A +L + +G+ FQ+ DD+LD + K Sbjct: 182 ELIHRHKTGALIRAAVRLGALAAGEPGRAALPQLDRYAAAIGLAFQVQDDILDVVGETEK 241 >gi|282877390|ref|ZP_06286213.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310] gi|281300442|gb|EFA92788.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310] Length = 324 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 15/228 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 QE K ++ LD L + + L I Y L LGGK+IR L+ +L+ + Sbjct: 5 QEILKLVNNHLDSLADE-------RQPRHLYEPIEYVLSLGGKRIRPTLMLLAYNLYREH 57 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L IE H Y+L+HDDL MD +RRG TVH ++D TAI++G+ +L A+ Sbjct: 58 PEDILMPACGIETYHNYTLLHDDL--MDQADLRRGHETVHKRWDANTAILSGDSMLVLAY 115 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGA 187 + ++ Q + + +++ T G +D + + E + + ++KT Sbjct: 116 QRMA----QCRPDKLKEVIDLFTQTALEIGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSV 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ A + GAI+ AS + L FGE +G+ FQL DD LD D Sbjct: 172 LLACALKIGAILGDASAEDANNLYRFGEKIGLAFQLQDDFLDVYGDSK 219 >gi|293400618|ref|ZP_06644763.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305644|gb|EFE46888.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 280 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 114/209 (54%), Gaps = 10/209 (4%) Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + ++ A++Y+L+ GGK+IR ++ + + V AAIE IH YSLIHDDLP Sbjct: 16 QDSKVKDAMQYSLMAGGKRIRPQILLAALQCYGIEERVGYPVAAAIEMIHTYSLIHDDLP 75 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPT H+Q+DE TAI+AG+ LLT AF + + ++ +L+ Sbjct: 76 AMDDDTLRRGKPTCHVQFDEATAILAGDALLTQAF--LLGAMASEDAMVNCAIVKALSRY 133 Query: 154 IGLQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210 G GM+ GQ+ D++ E + ++ I KTG L+ A + H + + Sbjct: 134 AGADGMVLGQIKDLEGEVKEDLTLAELKDIHYYKTGRLLTLPLVCAAYLTHH-EEDIPAW 192 Query: 211 RCFGENLGIIFQLADDLLDCE---EDLPK 236 G +LG+ FQ+ DD+LD E+L K Sbjct: 193 EQIGSDLGLSFQIQDDILDVTSTVEELGK 221 >gi|149183310|ref|ZP_01861750.1| HepT [Bacillus sp. SG-1] gi|148848968|gb|EDL63178.1| HepT [Bacillus sp. SG-1] Length = 320 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 12/219 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 DL+ + + L A + L GGK+IR V A + N + V A+E Sbjct: 15 DLIEKELKTAIDSRSPLLNEASLHLLSAGGKRIRPVFVLLSAKFGDYNINSIKNVAVALE 74 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH SL+HDD+ +D+ +RRGKPT+ Q+D TA+ G+ + + E ++ + Sbjct: 75 LIHSASLVHDDV--IDDADLRRGKPTIKSQWDNKTAMYTGDYIFARSLEYMTKIDNEDAH 132 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 I S ++ LT Q+ D D K KT L+ +C+ GAI A Sbjct: 133 KILSNAIVELTVGEI------EQIKDKYRFEQDLKDYLRRIKRKTALLIAVSCQLGAIAA 186 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A ++L FG N+G+ FQ+ DD+LD EE+L K Sbjct: 187 GAPPEIHKKLYRFGYNVGMSFQITDDILDFTASEEELGK 225 >gi|311693395|gb|ADP96268.1| trans-hexaprenyltranstransferase [marine bacterium HP15] Length = 322 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 121/227 (53%), Gaps = 12/227 (5%) Query: 13 SKRI-DTILDDLLLQTASHMQTQHND-RLLSAI-RYAL-LGGKKIRSFLVTECASLFNVN 68 ++RI DT+ DD +Q +D L+ I +Y + GGK++R LV + Sbjct: 3 AQRIYDTVADDFSRVNDLIIQRLSSDVPLVEKIAQYIIESGGKRLRPLLVLLSSQAAGYE 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L++ A IE +H +L+HDD+ +D +RRG+ T + ++ +++ G+ L AF Sbjct: 63 ENDHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTANARWGNAPSVLVGDFLYARAF 120 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E++ K+ +R +LS + +G + Q++++++ + E Q + KT L Sbjct: 121 EMMVELKS-----LRIMDVLSHATAVIAEGEVM-QLMNVKNPDLTEEQYMKVIHNKTAML 174 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A +GA++AHAS ++ L+ +G++LG+ FQL DD+LD + D Sbjct: 175 FEAASHTGALLAHASAEQELGLKDYGKHLGLAFQLVDDVLDYQGDAE 221 >gi|86139019|ref|ZP_01057590.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193] gi|85824250|gb|EAQ44454.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193] Length = 332 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 59/232 (25%), Positives = 116/232 (50%), Gaps = 16/232 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + L + + ++T++ + M ++H R+ + + GGK++R L A Sbjct: 13 LAATLSDEMEAVNTLI-------QTRMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAAR 65 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L Sbjct: 66 LCGYEGAHHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + +F+++ + ++ +L+ +G + QM + DE + + Sbjct: 124 FSRSFQLMVETGS-----LQVLDILANASATIAEGEVL-QMTAASNLATDEAVYLQVVRG 177 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL A + G ++A A + + + L +G+ LGI FQ+ADDLLD + D Sbjct: 178 KTAALFSAATQVGGVIAAAPETQIKGLFDYGDALGIAFQIADDLLDYQGDAA 229 >gi|89900061|ref|YP_522532.1| farnesyltranstransferase [Rhodoferax ferrireducens T118] gi|89344798|gb|ABD69001.1| Farnesyltranstransferase [Rhodoferax ferrireducens T118] Length = 327 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 108/230 (46%), Gaps = 17/230 (7%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 S + ++ + +D ++ +H + RY + GGK++R L+ Sbjct: 13 SVIAQDMREVDQVI--------AHRLDSGVPLVGQVARYIIAAGGKRLRPALLLLICGAL 64 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + A +E IH +L+HDD+ +D+ +RRG PT + + +++ G+ L + Sbjct: 65 GFKGAQRFNLAAVVEFIHTSTLLHDDV--VDDSSLRRGNPTANETFGNPASVLVGDFLYS 122 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 F+++ + N+R +L+ N+ +G + Q++++ + +DE + + KT Sbjct: 123 RCFQMMVDAQ-----NMRIMQVLADATNVIAEGEV-QQLMNMHNAELDEAGYLQVIRSKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L + GAI+A +S +E +G+ LG FQ+ DD+LD + Sbjct: 177 AKLFEASARVGAILAGSSPELEEICAEYGQALGTAFQVIDDVLDYTGEAA 226 >gi|53716444|ref|YP_105136.1| geranyltranstransferase [Burkholderia mallei ATCC 23344] gi|67643212|ref|ZP_00441960.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4] gi|121597567|ref|YP_991106.1| geranyltranstransferase [Burkholderia mallei SAVP1] gi|124382622|ref|YP_001025504.1| geranyltranstransferase [Burkholderia mallei NCTC 10229] gi|126446017|ref|YP_001077567.1| geranyltranstransferase [Burkholderia mallei NCTC 10247] gi|167000281|ref|ZP_02266100.1| geranyltranstransferase [Burkholderia mallei PRL-20] gi|254177164|ref|ZP_04883820.1| geranyltranstransferase [Burkholderia mallei ATCC 10399] gi|254203074|ref|ZP_04909436.1| geranyltranstransferase [Burkholderia mallei FMH] gi|254208407|ref|ZP_04914756.1| geranyltranstransferase [Burkholderia mallei JHU] gi|254359405|ref|ZP_04975677.1| geranyltranstransferase [Burkholderia mallei 2002721280] gi|52422414|gb|AAU45984.1| geranyltranstransferase [Burkholderia mallei ATCC 23344] gi|121225365|gb|ABM48896.1| geranyltranstransferase [Burkholderia mallei SAVP1] gi|126238871|gb|ABO01983.1| geranyltranstransferase [Burkholderia mallei NCTC 10247] gi|147746119|gb|EDK53197.1| geranyltranstransferase [Burkholderia mallei FMH] gi|147751094|gb|EDK58162.1| geranyltranstransferase [Burkholderia mallei JHU] gi|148028592|gb|EDK86552.1| geranyltranstransferase [Burkholderia mallei 2002721280] gi|160698204|gb|EDP88174.1| geranyltranstransferase [Burkholderia mallei ATCC 10399] gi|238524497|gb|EEP87930.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4] gi|243063768|gb|EES45954.1| geranyltranstransferase [Burkholderia mallei PRL-20] gi|261826895|gb|ABN00184.2| geranyltranstransferase [Burkholderia mallei NCTC 10229] Length = 294 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 76/235 (32%), Positives = 119/235 (50%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ +R++T L L T +L A+RYA+LGG K++R L Sbjct: 3 FDQWMRSVLERVETALGHYLP-----AGTVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGASEAARDAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L + ++ L+ L G GM GGQ +D+ + + + Sbjct: 118 QSQAFVALTDAAA-LPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALEKMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ + GA+ S + L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231 >gi|302348132|ref|YP_003815770.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans 345-15] gi|302328544|gb|ADL18739.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans 345-15] Length = 338 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 11/208 (5%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDL 92 + L +A + + GGK++R +V A A+ + +A+E H ++L+HDD+ Sbjct: 29 PEELYNASLHLIKAGGKRLRPLVVLATARALGGVDAEARAIPLASAVEIFHNFTLVHDDI 88 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLT 151 MDN RRG PTVH Y AI AG+ + + +F I+ S + L + + + +LT Sbjct: 89 --MDNDDFRRGVPTVHKVYGVPLAITAGDLMFSLSFASILRSLEKGLDEEYVIKAVQALT 146 Query: 152 HNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + + GQ D+ + +D + +KTGAL+ + + GAI A A E Sbjct: 147 EAS--RKVAEGQGYDMLFERSWNVDAEDYLRMIYLKTGALVEASAKLGAIAAKAKDEVIE 204 Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +G +G+ FQ+ DD+L D K Sbjct: 205 TMGEYGRLVGLAFQIRDDILGVFGDPSK 232 >gi|156973484|ref|YP_001444391.1| geranyltranstransferase [Vibrio harveyi ATCC BAA-1116] gi|156525078|gb|ABU70164.1| hypothetical protein VIBHAR_01174 [Vibrio harveyi ATCC BAA-1116] Length = 294 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 125/240 (52%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L S Q N+++++ L+ L L+ A++Y LLGGK++R FLV Sbjct: 1 MQETLTSYQQRNNQQLNQWLEQL---------PHQEQPLIQAMKYGLLLGGKRVRPFLVY 51 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ Sbjct: 52 ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 111 Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176 G+ L T AF I++ +N R +++ +L G GM GQ LD ++ + Sbjct: 112 GDALQTLAFTILAEGALNPNAENQRIKMVQALAQASGAGGMCLGQALDLGAENRRVSLAD 171 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D Sbjct: 172 LEEIHRNKTGALINCAVKLGALAAGEKGLEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231 >gi|120553786|ref|YP_958137.1| farnesyltranstransferase [Marinobacter aquaeolei VT8] gi|120323635|gb|ABM17950.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Marinobacter aquaeolei VT8] Length = 322 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 121/227 (53%), Gaps = 12/227 (5%) Query: 13 SKRI-DTILDDLLLQTASHMQTQHND-RLLSAI-RYAL-LGGKKIRSFLVTECASLFNVN 68 ++RI DT+ DD ++ +D L+ I +Y + GGK++R LV + Sbjct: 3 AQRIYDTVADDFSRVNDLIIKRLASDVPLVEKIAQYIIESGGKRLRPLLVLLASQAAGYQ 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L++ A IE +H +L+HDD+ +D +RRG+ T + ++ +++ G+ L AF Sbjct: 63 KDDHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTANAKWGNAPSVLVGDFLYARAF 120 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E++ ++ + +LS + +G + Q++++++ + E Q ++ KT L Sbjct: 121 EMMVELQS-----LPIMNVLSHATAVIAEGEVM-QLMNVKNPDLSEDQYMVVIHNKTAML 174 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A +GA++A AS+ ++ L+ +G++LG+ FQL DD+LD + D Sbjct: 175 FEAASHTGALLAKASKEQETALKDYGKHLGLAFQLVDDVLDYQGDAE 221 >gi|332534969|ref|ZP_08410787.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332035587|gb|EGI72079.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 295 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 89/224 (39%), Positives = 130/224 (58%), Gaps = 6/224 (2%) Query: 16 IDTILDDLLLQTASHM--QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72 I+ D++ H + + +A +Y L GGK++R FLV + N Sbjct: 7 IERAQRDVVATLQQHFKQPLDTEETVKNATQYGLFNGGKRLRPFLVYATGKMLGANQQDL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + AAIECIH YSL+HDDLP+MD+ +RRG+PT HI++ E AI+AG+ L T AFE+I+ Sbjct: 67 HVLAAAIECIHSYSLVHDDLPAMDDDDLRRGRPTCHIEFGEANAILAGDALQTLAFELIA 126 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190 + K + +++ +L H GL+GM+GGQ LDI D+ I ++ I K+KTGAL+ Sbjct: 127 NHKFTCSSQTQVKMIATLAHASGLEGMVGGQGLDIAATDKVITVQELARIHKLKTGALIN 186 Query: 191 FACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A GA+ + A Q E L FG +G+ FQ+ DD+LD E D Sbjct: 187 CAITLGALCSEKADQQTLENLSIFGYAIGLAFQVHDDILDVEGD 230 >gi|224418966|ref|ZP_03656972.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT 98-5491] gi|253827914|ref|ZP_04870799.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491] gi|313142478|ref|ZP_07804671.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT 98-5491] gi|253511320|gb|EES89979.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491] gi|313131509|gb|EFR49126.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT 98-5491] Length = 288 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 121/235 (51%), Gaps = 13/235 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M L S E + L+ + + + H + L GGK+ R L+ Sbjct: 1 MTEKLHSLFSEF--------ESYLISQSPKVPSFHPYYEKALWEMVLSGGKRFRPKLLLS 52 Query: 61 CASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A A+E +H YSLIHDDLP+MDN +RRG PT+H +YDE AI+ Sbjct: 53 VVYANKAKFASKAFAPALALEILHTYSLIHDDLPAMDNALLRRGVPTLHHKYDECGAILV 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177 G+GL T++F I+ K++LK I+++L+ L++N G+ GM+ GQ LD E + ++ Sbjct: 113 GDGLNTHSFYCIA--KSKLKPKIKNKLIEILSYNGGIHGMVLGQALDCYFEKQTLPLEKL 170 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KT L+ A + G I+A + ++L G +LG+ FQ+ DD++D + Sbjct: 171 RTIHLNKTAKLIAAALQMGGIIAKCDKKFCQKLYKIGLDLGLFFQIRDDIIDATQ 225 >gi|160915116|ref|ZP_02077329.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991] gi|158432915|gb|EDP11204.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991] Length = 280 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 10/208 (4%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + ++ A+ Y+LL GGK+IR L+ + + AAIE IH YSLIHDDLP+ Sbjct: 17 DSKVKEAMLYSLLAGGKRIRPQLLFSALKAYGIAEEKGFPCAAAIEMIHTYSLIHDDLPA 76 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRG+PT HIQ+DE TAI+AG+ LLT AF + + + ++S Sbjct: 77 MDDDTLRRGRPTCHIQFDEATAILAGDALLTQAFHEVLKSDATASQLVSLESLIS--SYS 134 Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+ GQ+ D++ E + + + + KTG L+ A++A+ + + E + Sbjct: 135 GANGMVLGQIYDLEAEGRCDVSIEALQRVHEYKTGKLITLPLLCAAVLANH-EEDFEVWK 193 Query: 212 CFGENLGIIFQLADDLLDCE---EDLPK 236 G +G+ FQ+ DD+ D E+L K Sbjct: 194 SIGYAMGLSFQIQDDVFDVTSTCEELGK 221 >gi|167842189|ref|ZP_02468873.1| geranyltranstransferase [Burkholderia thailandensis MSMB43] Length = 294 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 75/235 (31%), Positives = 120/235 (51%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ +R++T L L +T +L A+RYA+LGG K++R L Sbjct: 3 FDQWMRSVLERVETALGHYLP-----AETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + +A+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGASEAALNAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ L + ++ L+ L G GM GGQ +D+ + + + Sbjct: 118 QSQAFVALTDAAA-LPADRQAALVCELALASGSIGMAGGQAIDLASVGVALTRDALETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ + GA+ S + L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231 >gi|237797521|ref|ZP_04585982.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020371|gb|EGI00428.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 295 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S + R++ L+ L + RL A+RY+++ GGK++R L Sbjct: 2 IASYQALSQTRVNAALESLFQAPGPELA-----RLYDAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGEARDADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + +P +D R Q++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDSLQVYARAVGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|319761641|ref|YP_004125578.1| polyprenyl synthetase [Alicycliphilus denitrificans BC] gi|317116202|gb|ADU98690.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC] Length = 349 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 111/232 (47%), Gaps = 15/232 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61 + + ++ + +D ++ L Q++ + ++SA GGK++R L+ Sbjct: 30 TAATLALIADDMREVDKVIAARL-QSSVPLVGSVAQYIISA------GGKRLRPALLLLT 82 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + A +E IH +L+HDD+ +D +RRG+PT + + +++ G+ Sbjct: 83 CGALEYKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANEAFGNPASVLVGD 140 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L T +F+++ + +R +L+ N+ +G + Q+++ D +DE + Sbjct: 141 FLHTRSFQMMVEAGS-----MRILQVLADATNVIAEGEV-QQLMNTHDASLDEAGYLHVI 194 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT L + AI+A ++ + ++ +G+ LG FQ+ DD+LD + D Sbjct: 195 RSKTAKLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVLDYDGD 246 >gi|56708589|ref|YP_170485.1| geranyltranstransferase [Francisella tularensis subsp. tularensis SCHU S4] gi|110671060|ref|YP_667617.1| geranyltranstransferase [Francisella tularensis subsp. tularensis FSC198] gi|134301456|ref|YP_001121424.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|224457771|ref|ZP_03666244.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|254371220|ref|ZP_04987222.1| geranyltranstransferase [Francisella tularensis subsp. tularensis FSC033] gi|254875451|ref|ZP_05248161.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|56605081|emb|CAG46195.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321393|emb|CAL09578.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis FSC198] gi|134049233|gb|ABO46304.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|151569460|gb|EDN35114.1| geranyltranstransferase [Francisella tularensis subsp. tularensis FSC033] gi|254841450|gb|EET19886.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159817|gb|ADA79208.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 293 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 7/221 (3%) Query: 17 DTILDDL--LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 + I+ D + + LLSA+ Y+ GGK+IR+ V ++ Sbjct: 4 ENIIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCD 63 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ A+E IH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L AFEI+ Sbjct: 64 KIAFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQD 123 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 D ++ ++ G GM+GGQ LDI+ E + ++ ++ KT + Sbjct: 124 INYSDIDKLK-KINKLFAQYCGASGMVGGQQLDIEGENKKLKIEELQILHTNKTAKMFRA 182 Query: 192 ACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I++ + + ++ L + +G+ FQ+ DD+LD Sbjct: 183 CIVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVT 223 >gi|167764761|ref|ZP_02436882.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC 43183] gi|167697430|gb|EDS14009.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC 43183] Length = 324 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 12/222 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + A + L + Y L +GGK+IR L+ +L+ + Sbjct: 6 ELLDKINSHIADLQFERTPKGLYDPVAYVLSMGGKRIRPVLMLMAYNLYKEDVRPVFSPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A++ ++ Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADKRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAQCPA 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 + + L+ + GQ +D+ E E + + ++KT L+ + Sbjct: 124 EHLKAVMDLFSLT------ALEICEGQQMDMDFEQRSDVKEEEYLEMIRLKTSVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GA++ AS + ERL FG N+G+ FQL DDLLD D Sbjct: 178 KIGALLGGASAEDAERLYDFGMNMGVAFQLKDDLLDVYGDTA 219 >gi|160880644|ref|YP_001559612.1| polyprenyl synthetase [Clostridium phytofermentans ISDg] gi|160429310|gb|ABX42873.1| Polyprenyl synthetase [Clostridium phytofermentans ISDg] Length = 335 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 79/271 (29%), Positives = 129/271 (47%), Gaps = 45/271 (16%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + KL + ++ ++ L + +T + A+ Y+LL GGK+IR ++ E Sbjct: 4 DTNIEEKLHQKAETFAQMMTAYLPKEQGQQKT-----IFDALSYSLLAGGKRIRPIILLE 58 Query: 61 CASLFNVNHLT-ALRVG-------------------------AAIECIHCYSLIHDDLPS 94 ALR A+E IH YSL+HDDLP+ Sbjct: 59 TYQALKEQEKGGALRASQLDIINENADFSWFKTLDDIVTKFSVALEMIHTYSLVHDDLPA 118 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-----------NIR 143 MDN RRGK T H +Y E I+AG+ LL AFE+++ +KD + Sbjct: 119 MDNDEYRRGKLTTHAKYGEDMGILAGDALLNGAFELVAEAFANIKDIENSTDAITLYDRV 178 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAH 201 S+ L+ G+ GM+GGQ++D++ + + ++ I ++KTGAL+ + GAI++ Sbjct: 179 SRAYQMLSSRSGMYGMIGGQVVDVERTGSVLSKEELLFIYELKTGALLEASFLIGAILSG 238 Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A+Q E R + +G+ FQ+ DD+LD Sbjct: 239 ANQEELIRFTKIAKKVGLAFQIQDDILDVTS 269 >gi|163790196|ref|ZP_02184629.1| geranyltranstransferase [Carnobacterium sp. AT7] gi|159874471|gb|EDP68542.1| geranyltranstransferase [Carnobacterium sp. AT7] Length = 299 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 76/224 (33%), Positives = 126/224 (56%), Gaps = 7/224 (3%) Query: 17 DTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 + ++ + ++ + ++L A+ Y++ GGK+IR L+ + Sbjct: 8 ENVIPSFEKEMLDYIGKELTKKEKLHEAMSYSIAAGGKRIRPLLLLATIQSLGGDIKKGY 67 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 AA+E IH YSLIHDDLP+MD+ +RRGKPT HI Y E AI+AG+ LLT AFEII+ Sbjct: 68 AASAALEFIHTYSLIHDDLPAMDDDDLRRGKPTSHIVYGEDIAILAGDALLTQAFEIIAD 127 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCF 191 + + +L+ +L + G +GM+ GQM DIQ E ++ ++ I + KTG L+ F Sbjct: 128 --SDESSEKKVKLISALAKSAGPKGMILGQMADIQGEKKSLNLEELQFIHRNKTGELLKF 185 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + ++A + +E+L + E++G+ +Q+ DD+LD D+ Sbjct: 186 PIYAACVIADTTTEIEEQLMGYAEHIGLAYQIRDDILDVIGDVA 229 >gi|222153401|ref|YP_002562578.1| geranyltranstransferase [Streptococcus uberis 0140J] gi|222114214|emb|CAR42776.1| putative geranyltranstransferase [Streptococcus uberis 0140J] Length = 289 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 78/237 (32%), Positives = 122/237 (51%), Gaps = 17/237 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68 + K+ID + + A +++L A+ Y++ GGK+IR L E + Sbjct: 2 DKLKKIDQTIHAFYCEKA-----VISEKLNEAVLYSINAGGKRIRPILFLEVIEALQIPL 56 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + AA+E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L AF Sbjct: 57 TESHFKAAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAF 116 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186 +++ T ++ L+ SL+ G GM+GGQMLD+ E ++ + +I + KTG Sbjct: 117 GMLAE--TDFPTDVTVDLVRSLSSASGTFGMVGGQMLDMAAEGKKLNLKNLQLIHRHKTG 174 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE------EDLPKK 237 L+ + + A +A +N G +G+ FQ+ DD+LD PKK Sbjct: 175 QLLAYPFWAAARVAQLDENLLATFLEIGMIIGLAFQVRDDILDITANFEEIGKTPKK 231 >gi|313891715|ref|ZP_07825320.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E] gi|313119709|gb|EFR42896.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E] Length = 284 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 85/228 (37%), Positives = 132/228 (57%), Gaps = 10/228 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+E I+ L LL Q + L ++ Y+LL GK+IR L +F V Sbjct: 6 LKEKRNLINKHLAGLL-----KTQRPEHKILFDSMNYSLLSNGKRIRGCLFLFILEMFKV 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++L L + A++EC+H YSLIHDDLP MDN RRG T H +Y E A+ AG+ LLT+A Sbjct: 61 DYLQYLDIAASVECVHTYSLIHDDLPCMDNDDYRRGILTNHKKYGEGVALQAGDALLTFA 120 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185 F++IS K KD + +LS+ G +GM+ GQ + I++ I+ ++ ++ K KT Sbjct: 121 FQLISQAKFSAKDRCKLIEILSIA--AGAEGMVAGQVHDIQIENRSIELDELKLLDKFKT 178 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 G ++ + + H S ++ E+LR F ++LG++FQ+ DD+LD +ED Sbjct: 179 GRMIKAPVDMAIQLTHMSISDAEQLRKFAKHLGLLFQITDDILDYKED 226 >gi|239817188|ref|YP_002946098.1| trans-hexaprenyltranstransferase [Variovorax paradoxus S110] gi|239803765|gb|ACS20832.1| Trans-hexaprenyltranstransferase [Variovorax paradoxus S110] Length = 345 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 15/219 (6%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74 +D ++ L T + +Q + ++SA GGK++R L+ + Sbjct: 39 EVDRVIAQRL-DTGVPLVSQVSKYIISA------GGKRLRPALLLLMSGALGYTGEQRFN 91 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A +E IH +L+HDD+ +D +RRG+PT + + +++ G+ L + AF+++ Sbjct: 92 LAAVVEFIHTATLLHDDV--VDESTLRRGRPTANESFGNPASVLVGDFLYSRAFQMMLDA 149 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 +N+R +L+ N+ +G + Q++++ D +DE+ + + KT L + Sbjct: 150 -----NNMRIMQILAEATNVIAEGEVL-QLMNMHDATLDESAYLRVIRSKTAKLFEASTR 203 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A++A A+ +E +G+ LG FQ+ DD+LD D Sbjct: 204 LAAVLAGATPEVEEACATYGQALGTAFQVIDDVLDYAGD 242 >gi|209559666|ref|YP_002286138.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Streptococcus pyogenes NZ131] gi|209540867|gb|ACI61443.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Streptococcus pyogenes NZ131] Length = 221 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 74/219 (33%), Positives = 121/219 (55%), Gaps = 6/219 (2%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75 +D+ + + ++ L+ AI Y++ GGK+IR ++ E F V+ A + Sbjct: 5 ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F +I+ Sbjct: 65 AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193 +L ++ L+ L+ G GM+GGQMLD+ +++ + Q+ +I KTG L+ F Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ A++ + +++L G +G FQ+ DD+LD Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTA 221 >gi|113971065|ref|YP_734858.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4] gi|113885749|gb|ABI39801.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4] Length = 293 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 97/238 (40%), Positives = 138/238 (57%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L + ++E R+ DD L Q S ++ +L +A+ + ALLGGK+IR FLV Sbjct: 2 LVNAIKEYQLRV----DDQLKQRFSTLE-DTAPQLKAAMSHGALLGGKRIRPFLVYSVGQ 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVPLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 T AFEI++ T + ++ +L G +GM GGQ +D D+ ID + + Sbjct: 117 QTLAFEIVTEAVTGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 MKTGAL+ A E I A+A ++E + + F +G+ FQ+ DD+LD E+L K Sbjct: 177 NMKTGALISCAVELALIAANAPKDEYQTMIEFAHAVGLAFQVQDDILDIIATTEELGK 234 >gi|261366961|ref|ZP_05979844.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176] gi|282571079|gb|EFB76614.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176] Length = 295 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 87/238 (36%), Positives = 128/238 (53%), Gaps = 17/238 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 Q + +R++ + D+ L Q A + A RY+LLGG K+IR+ L Sbjct: 10 FTKWAQMSEERLEKLCDEYLPQKA---------EIGQAARYSLLGGGKRIRAVLALSACE 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AL A+E +HCYSLIHDD+P MDN RRG+P+ H QY E TA++A + L Sbjct: 61 LAGKPAELALDYACALEMLHCYSLIHDDMPCMDNDDFRRGRPSCHKQYGEATALLAADAL 120 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 +T AFE+I+ + + R+ +L G +GML GQ LD + + E Q+ + Sbjct: 121 VTAAFEVIAQAELSPESRCRAAAVL--AKAGGARGMLYGQELDKKYEAQSATEQQLLELH 178 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 KTGAL+ A E G I A A+ ++ L+ + LG++FQ+ DD+LD E+L K Sbjct: 179 AHKTGALILAAVELGCIAADAAPATRQALQRYAAELGLVFQIVDDILDVTSTTEELGK 236 >gi|225573687|ref|ZP_03782442.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM 10507] gi|225038980|gb|EEG49226.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM 10507] Length = 295 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN +L ++ I+ ++ L + T L A+ Y+ L GGK++R ++ Sbjct: 1 MN--FKEELNLKTQEIEQLIRRYLPKEEGFAST-----LARAMNYSMLAGGKRLRPLMMQ 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E +F A+E IH +SLIHDDLP++DN RRG+ T + E +I+ Sbjct: 54 EVYRMFGGTQRVIEPFMVAMEMIHTHSLIHDDLPALDNDEYRRGRETTWKVFGEDMGVIS 113 Query: 120 GNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G LL YA+E+ +S + + + L G+ GMLGGQ +D++++ +D Sbjct: 114 GAALLNYAYEVALSGFELTDRTERVVLALRVLAAKTGMYGMLGGQSVDVENDRKPLDLQL 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I + KT ALM + GAI+A A + ++ +G+ FQ+ DD+LD E+ Sbjct: 174 LDYIYENKTSALMEASMMVGAILAGAENTKIRQVEKAAGCVGLAFQIEDDILDVTSTQEE 233 Query: 234 LPK 236 L K Sbjct: 234 LGK 236 >gi|254458755|ref|ZP_05072179.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales bacterium GD 1] gi|207084521|gb|EDZ61809.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales bacterium GD 1] Length = 282 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 120/216 (55%), Gaps = 6/216 (2%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRVGAA 78 + LL+ ++ H + + + GGK+ R L+ + +N A A Sbjct: 4 FETFLLENLPTSKSIHPTYEKALQQMLIAGGKRFRPALLLGVVAAYNSLMLDGARHAAYA 63 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E +H YSLIHDDLP+MD+ +RRG+PT+H+ YDEVTAI+ G+ L TY+FE++S+ Sbjct: 64 VELLHTYSLIHDDLPAMDDSPLRRGEPTLHVLYDEVTAILVGDALNTYSFEVLSNA--PF 121 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196 D R +L+ L N GL GM+ GQ +D E ++ + ++ KT L+ + + G Sbjct: 122 SDYTRVKLIQELAKNGGLNGMVLGQAIDCYFENKPLNVADIKILHTNKTAKLIAASLKMG 181 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 AI+ + ++L FG LG++FQ+ DD+LD + Sbjct: 182 AIIVGQ-EELGDKLYAFGIKLGLLFQIQDDILDVTQ 216 >gi|77919579|ref|YP_357394.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380] gi|77545662|gb|ABA89224.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380] Length = 322 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 15/225 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 L+E+ + I++ L ++ + L S GGK+IR L+ CA L N Sbjct: 8 LKEDLQHIESCFRQYLTSDVPLIRQMSDYILAS-------GGKRIRPVLLLLCARLSGYN 60 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + IE IH +L+HDD+ +D +RRG+ ++ + A++ G+ L F Sbjct: 61 GEHRYPLASVIEFIHTATLLHDDV--VDGATLRRGQVAANVTWGNDIAVLVGDYLFARCF 118 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E++ + R +L+ T ++ QG + Q+++ D +DE + + + KT AL Sbjct: 119 EMMVD-----FCDRRIMQVLANTTSLMAQGEVV-QLINSGDLSLDEERYLSVVRSKTAAL 172 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 C AI+ S ++E L FG +LG+ FQL DD LD D Sbjct: 173 FSATCRCAAILGQLSAEKEEDLAGFGMHLGVAFQLVDDALDYVAD 217 >gi|84500217|ref|ZP_00998483.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597] gi|84392151|gb|EAQ04419.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597] Length = 331 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 16/231 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 + + L ++ ++ ++ + M ++H R+ + + GGK+IR L Sbjct: 10 EAIAALLADDLGAVNALIRE-------RMASRHAPRIPEVTAHLVEAGGKRIRPMLTLAA 62 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 63 ARLCGYDGPYHIHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGD 120 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L AF+++ P N+R +LS +G + Q+ QD E + Sbjct: 121 YLFARAFQLMVEPG-----NLRVLSILSDAAATIAEGEVL-QLSAAQDLKTTEETYLQVI 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KT AL A E+G +A AS + L +G+ LGI FQ+ADDLLD Sbjct: 175 RGKTAALFSAATEAGGEIAGASPAQVRALFDYGDALGIAFQMADDLLDWTG 225 >gi|319795463|ref|YP_004157103.1| polyprenyl synthetase [Variovorax paradoxus EPS] gi|315597926|gb|ADU38992.1| Polyprenyl synthetase [Variovorax paradoxus EPS] Length = 330 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 15/219 (6%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74 +D ++ L T + +Q + ++SA GGK++R L+ + Sbjct: 24 EVDRVIARRL-DTGVPLVSQVSQYIISA------GGKRLRPALLLLMSGALGYTGEQRFN 76 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF+++ Sbjct: 77 LAAVVEFIHTATLLHDDV--VDESTLRRGRATANESFGNPASVLVGDFLYSRAFQMMLDA 134 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 +NIR +L+ N+ +G + Q++++ D +DET + + KT L + Sbjct: 135 -----NNIRVMEILAEATNVIAEGEVL-QLMNMHDASLDETAYLRVIRSKTAKLFEASTR 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A++A + +E +G+ LG FQ+ DD+LD D Sbjct: 189 LAAVLAGVTPEVEEACATYGQALGTAFQVIDDVLDYAGD 227 >gi|254462754|ref|ZP_05076170.1| geranylgeranyl pyrophosphate synthase [Rhodobacterales bacterium HTCC2083] gi|206679343|gb|EDZ43830.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium HTCC2083] Length = 333 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 14/233 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 + + L ++ ++ ++ + + + L+ A GGK++R L A Sbjct: 12 DAMAAYLADDLNAVNVLIQQRMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAA 65 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 66 HLCGYDGPYHVHLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDY 123 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L + +F+++ + +R +L+ +G + Q+ QD E + + Sbjct: 124 LFSRSFQLMVETGS-----MRVLDILANASATIAEGEVL-QLTASQDLSTTEAIYLQVVR 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL A E G ++A A + + L +G+ LGI FQ+ DDLLD D Sbjct: 178 GKTAALFSAATEVGGVIAGADEAHVKALFDYGDALGIAFQIVDDLLDMSGDAG 230 >gi|187931182|ref|YP_001891166.1| geranyl diphosphate synthase/farnesyl diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712091|gb|ACD30388.1| geranyl diphosphate synthase/farnesyl diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] Length = 293 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 72/229 (31%), Positives = 118/229 (51%), Gaps = 10/229 (4%) Query: 17 DTILDDL--LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 + I+ D + + LLSA+ Y+ GGK+IR+ V ++ Sbjct: 4 ENIIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCD 63 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ A+E IH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L AFEI+ Sbjct: 64 KIAFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQD 123 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 D ++ ++ G GM+GGQ LDI+ E + ++ ++ KT + Sbjct: 124 INYSDIDKLK-KINKLFAQYCGASGMVGGQQLDIEGENKKLKIEELQILHTNKTAKMFRV 182 Query: 192 ACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 I++ + + ++ L + +G+ FQ+ DD+LD + +L K Sbjct: 183 CIVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVTKTTNELGK 231 >gi|149378271|ref|ZP_01895982.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893] gi|149357436|gb|EDM45947.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893] Length = 322 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 121/227 (53%), Gaps = 12/227 (5%) Query: 13 SKRI-DTILDDLLLQTASHMQTQHND-RLLSAI-RYAL-LGGKKIRSFLVTECASLFNVN 68 ++RI DT+ DD ++ +D L+ I +Y + GGK++R LV + N Sbjct: 3 AQRIYDTVADDFSRVNDLIIKRLSSDVPLVEKIAQYIIESGGKRLRPLLVLLSSRALGYN 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L++ A IE +H +L+HDD+ +D +RRG+ T + ++ +++ G+ L AF Sbjct: 63 KDEHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTANARWGNAPSVLVGDFLYARAF 120 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E++ + N++ +LS + +G + Q++++++ + E + + KT L Sbjct: 121 EMMVELQ-----NLKIMDVLSHATAVIAEGEVL-QLMNVKNPDVSEDKYMEVIHNKTAML 174 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A +GA++A A+ ++++ L +G++LG+ FQL DD+LD D Sbjct: 175 FEAASHTGALLAGANGSQEQALSAYGKHLGLAFQLVDDVLDYRGDAE 221 >gi|160900919|ref|YP_001566501.1| polyprenyl synthetase [Delftia acidovorans SPH-1] gi|160366503|gb|ABX38116.1| Polyprenyl synthetase [Delftia acidovorans SPH-1] Length = 359 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 112/227 (49%), Gaps = 15/227 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 + + ++ + +D ++ L T + Q + +++A GGK++R L+ + Sbjct: 45 ALITDDMREVDHVIAQRLTTTVP-LIAQISQYIIAA------GGKRLRPALLLMVCNALG 97 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A +E IH +L+HDD+ +D +RRG+PT + + +++ G+ L + Sbjct: 98 YEGRDRHVLAAVVELIHTATLLHDDV--VDESTLRRGRPTANETFGNPASVLVGDFLHSR 155 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 +F+++ + +R +LS N+ +G + Q+++ D +DE + + KT Sbjct: 156 SFQMMVEVGS-----MRVLKILSDATNVIAEGEV-QQLINTHDASLDEAGYLHVIRSKTA 209 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L + + GA++A A + ++ +G+ LG FQ+ DD+LD D Sbjct: 210 QLFEASAQLGAVLADAPREIEQACAIYGQALGTAFQIIDDVLDYTGD 256 >gi|255321733|ref|ZP_05362888.1| geranyltranstransferase [Campylobacter showae RM3277] gi|255301213|gb|EET80475.1| geranyltranstransferase [Campylobacter showae RM3277] Length = 388 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 74/222 (33%), Positives = 121/222 (54%), Gaps = 8/222 (3%) Query: 17 DTILDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH-LTA 72 D +L + +H+ + A+ Y L GGK R+ LV + A Sbjct: 107 DALLAEFKAFLNAHLPSSPSFHPCFDEALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAA 166 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 V A E +H YSLIHDDLP+MD+ +RRG+P++H+++DEVTAI+AG+ L T+AF I+ Sbjct: 167 FHVALAFETMHSYSLIHDDLPAMDDSDLRRGQPSLHVKFDEVTAILAGDALNTHAFYQIA 226 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 K L ++R + + L+ N G+ GM GQ +D E + ++ + KT L+ Sbjct: 227 --KAPLDADVRIKCVEILSRNAGIYGMALGQAVDCYFENQKLGLEELKFLHIHKTARLIA 284 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + ++G ++A + E R+ G +LG+ FQ+ADD++D + Sbjct: 285 ASLQAGCVVAGLDEAEAARIYDIGLDLGLAFQIADDIIDATQ 326 >gi|85703102|ref|ZP_01034206.1| farnesyl diphosphate synthase [Roseovarius sp. 217] gi|85672030|gb|EAQ26887.1| farnesyl diphosphate synthase [Roseovarius sp. 217] Length = 287 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 88/233 (37%), Positives = 131/233 (56%), Gaps = 15/233 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 + ++L ++ I T L +L + + +RYA GGK+IR FL+ E A L Sbjct: 1 MQARLAAEAEVIQTHLTRVLAPFGT-------GPVAEGMRYATQGGKRIRGFLLMESARL 53 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 V +AL AIE +H YSL+HDDLP+MDN +RRG+PTVH+++DE TAI+ G+ L Sbjct: 54 HAVPETSALWPATAIEALHAYSLVHDDLPAMDNDDLRRGQPTVHVKWDEATAILVGDALQ 113 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180 + AFE+++ P +R+ L L+L G QGM+ GQ LDI E + ++ + Sbjct: 114 SLAFELVAHPDCG-PAAVRADLTLTLARAAGGQGMVLGQALDIAAETATTPLSLDEITTL 172 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 Q KTGAL+ ++ +GA MA A L + LG+ FQ+ DD++D D Sbjct: 173 QAGKTGALILWSATAGARMAMADSA---PLSTYARALGLAFQIQDDVIDVTGD 222 >gi|255264686|ref|ZP_05344028.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62] gi|255107021|gb|EET49695.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62] Length = 332 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 16/229 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + L + + ++ ++ A+ M ++H R+ + + GGK++R L A Sbjct: 14 LNAALTTDLEAVNEVI-------AARMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAAQ 66 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L Sbjct: 67 LCGYDGDNHIKLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNQSSVLVGDYL 124 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 +F+++ + +R +L+ +G + QM QD E I + Sbjct: 125 FARSFQLMVKTGS-----LRVLDILANAAATIAEGEVL-QMTAAQDLGTTEDTYLKIVRG 178 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT AL A + G +++ A + + L +G+ LGI FQ+ DDLLD Sbjct: 179 KTAALFSAATQVGGVISDADETIVKALYDYGDALGIAFQIVDDLLDYGG 227 >gi|163738897|ref|ZP_02146310.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107] gi|161387702|gb|EDQ12058.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107] Length = 332 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 117/232 (50%), Gaps = 16/232 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + L + ++T++ + M ++H R+ + + GGK++R L A Sbjct: 13 LAATLSDEMAAVNTLI-------QTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 65 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L Sbjct: 66 LCGYSGDNHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 +F+++ + +R +L+ +G + QM D DE + + Sbjct: 124 FARSFQLMVETGS-----LRVLDILANASATIAEGEVL-QMTAASDLATDEGIYLQVVRG 177 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL A ++G ++A+A + + + L +G+ LGI FQ+ADDLLD + D Sbjct: 178 KTAALFSAATQAGGVVANAPETQIDALFAYGDALGIAFQIADDLLDYQGDSA 229 >gi|77464324|ref|YP_353828.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase [Rhodobacter sphaeroides 2.4.1] gi|57115620|gb|AAW33555.1| decaprenyl diphosphate synthase [Rhodobacter sphaeroides] gi|77388742|gb|ABA79927.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Rhodobacter sphaeroides 2.4.1] Length = 333 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 14/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + L E+ ++ ++ + + + + L+ A GGK++R L A L Sbjct: 14 LAAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 67 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D + RRGKPT ++ +D ++++ G+ L Sbjct: 68 CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 125 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 +F+++ + +R +L+ +G + Q+ QD E + + K Sbjct: 126 ARSFQLMVETGS-----LRVMDILANASATISEGEVL-QLTAAQDLRTTEDIYLQVVRGK 179 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T AL A E G ++A + + E L +G+ LGI FQ+ DDLLD Sbjct: 180 TAALFAAATEVGGVVAGVPEAQVEALHAYGDALGIAFQIVDDLLDYGG 227 >gi|225024517|ref|ZP_03713709.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC 23834] gi|224942668|gb|EEG23877.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC 23834] Length = 295 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 86/229 (37%), Positives = 129/229 (56%), Gaps = 5/229 (2%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNH 69 +N ++ +L+L+ + RL A+RYA+LGG K++R LV A L Sbjct: 5 DNWQQRARAQAELVLERVLPAENSLPQRLHQAMRYAVLGGGKRLRPLLVLAAAELGQSEA 64 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A AA+E +H YSL+HDD+P+MDN +RRGKPT H+QYDE TA++ G+ L T AF+ Sbjct: 65 AAAEAALAAVELVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTLAFD 124 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGA 187 ++S P L + Q++ +L G GM GGQ +D+Q + I + ++ + ++KTGA Sbjct: 125 VLSRP-NGLPAPRQLQMVHTLARASGSLGMAGGQAIDLQSVGQRIGQAELETMHRLKTGA 183 Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ A GA+ RL + LG+ FQ+ DD+LDCE D Sbjct: 184 LIRAAVALGALSCPDLDDAALARLDDYAAKLGLAFQVIDDVLDCEADTA 232 >gi|311110938|ref|ZP_07712335.1| farnesyltranstransferase [Lactobacillus gasseri MV-22] gi|311066092|gb|EFQ46432.1| farnesyltranstransferase [Lactobacillus gasseri MV-22] Length = 288 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 24/246 (9%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN L ++ + +ID L+D L N + Y+++ GGK++R L Sbjct: 1 MN--LKDFQKKYTPQIDKFLEDHLASEVD------NPIFSKIMSYSVMAGGKRLRPLLFL 52 Query: 60 ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 N + LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+ Sbjct: 53 ATLETLNYKISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAIL 112 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-- 176 AG+ LL + I+ + L + ++ +G GM GGQ LDI D + Sbjct: 113 AGDALLPLGIQWITEGSNS------AALAIIISQAVGPNGMGGGQYLDIDSTNNDLVKEN 166 Query: 177 ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230 + ++ +KTG L+ + + A+ A AS +E +RL F + G +Q+ DDL+D Sbjct: 167 AKVIDQMEWLKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVET 226 Query: 231 EEDLPK 236 E++ K Sbjct: 227 EQEAGK 232 >gi|110597592|ref|ZP_01385877.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031] gi|110340712|gb|EAT59189.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031] Length = 366 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 16/241 (6%) Query: 1 MNGGLPSKLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58 MN + +L E R+ T ++D L + + Q L RY L G GK+IR FL Sbjct: 35 MNIPVTQELVEKKYRLYHTKINDAL---GTCFEKQSPVTLYEPARYILEGKGKRIRPFLT 91 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 + + + AL V A+E +H ++L+HDD+ MD +R G+PTVH++++ AI+ Sbjct: 92 LLASEAVSGSSENALNVALAVEVLHNFTLMHDDI--MDQADLRHGRPTVHLEWNVNAAIL 149 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDET 175 +G+ ++ YA+E+ K+ L N + GQ LD++ E Sbjct: 150 SGDMMIAYAYELALQAKSSRHAE------LVHILNDANITICEGQALDMELEEKKDATIA 203 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTG L+ A E+G + +A+ + L FGE +G FQ+ DD LD D Sbjct: 204 DYLDMIAKKTGRLISAALEAGGVAGNATDEQLRSLVLFGEKIGRAFQIQDDYLDIMADDG 263 Query: 236 K 236 K Sbjct: 264 K 264 >gi|331701507|ref|YP_004398466.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929] gi|329128850|gb|AEB73403.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929] Length = 297 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 80/243 (32%), Positives = 127/243 (52%), Gaps = 15/243 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L + +I+ IL++ + L +A+ Y++ GGK++R L Sbjct: 1 MATNLTDFERLWVPKINQILENDIK------PDTDQTTLEAAMIYSVNAGGKRLRPLLTL 54 Query: 60 EC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 ASL + T L+ A+E +H YSLIHDDLP+MDN +RRGKPT H+++ A + Sbjct: 55 AVLASLGDPIDQTVLKTSCALELMHSYSLIHDDLPAMDNDDLRRGKPTNHVKFGAGMATL 114 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 AG+GL AF+ + L +++L L+L G GM+ GQ DI+ E + + Sbjct: 115 AGDGLQPLAFQWLVD--NDLDSQTQAELTLALAKAAGPHGMVSGQADDIEFEGTRLSLSG 172 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EED 233 + + + KTGAL+ +A E+G IM +++ L F E G +Q+ DD+LD E + Sbjct: 173 LQKLDRNKTGALIRYAVEAGLIMGRVIPEKRKSLLTFAEKFGEAYQIYDDILDVVGTEAE 232 Query: 234 LPK 236 + K Sbjct: 233 IGK 235 >gi|117921341|ref|YP_870533.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3] gi|117613673|gb|ABK49127.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3] Length = 293 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 137/238 (57%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L + ++E R+ DD L Q S ++ +L +A+ + ALLGGK+IR FLV Sbjct: 2 LVNAIKEYQLRV----DDQLKQRFSTLE-DTAPQLKAAMTHGALLGGKRIRPFLVYSVGQ 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVPLEKLDASAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 T AFEI++ + ++ +L G +GM GGQ +D D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 MKTGAL+ A E I A+A ++E + + F +G+ FQ+ DD+LD E+L K Sbjct: 177 NMKTGALISCAVELALIAANAPKDEYQTMMEFAHAVGLAFQVQDDILDIIATTEELGK 234 >gi|254282519|ref|ZP_04957487.1| geranyltranstransferase [gamma proteobacterium NOR51-B] gi|219678722|gb|EED35071.1| geranyltranstransferase [gamma proteobacterium NOR51-B] Length = 279 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 86/217 (39%), Positives = 123/217 (56%), Gaps = 9/217 (4%) Query: 28 ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHC 84 H + +L +A Y L GK++R+ LV E A++ V AIE +H Sbjct: 5 EPHSIPCPDPQLAAAAEYVLANPGKQLRAKLVRETAAMLGSADPNCGVETVATAIELLHS 64 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSL+HDDLP+MDN +RRG+PTVH +DE TAI+ G+G AFEII+ + L R Sbjct: 65 YSLVHDDLPAMDNDDLRRGRPTVHRAFDEATAILVGDGFQARAFEIIAR-DSSLSAEQRV 123 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA 202 +L L+ +G +GM+GGQ LD+ E ++ + ++KTGAL+ A GAI+A A Sbjct: 124 ELFALLSQAVGFEGMVGGQALDMAAEHQQCGIAELTRLHRLKTGALIQAAVVGGAIVAGA 183 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 ++ +RL F NLG+ FQ+ DD+LD DL K Sbjct: 184 NRETLDRLATFAMNLGLAFQVIDDVLDVTACSDDLGK 220 >gi|260596789|ref|YP_003209360.1| geranyltranstransferase [Cronobacter turicensis z3032] gi|260215966|emb|CBA28595.1| Geranyltranstransferase [Cronobacter turicensis z3032] Length = 299 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 88/242 (36%), Positives = 130/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ ++R ++ L + L+ A+ Y LLGGK++R FLV Sbjct: 2 DFSQQLQSQAERANSALQHFIGAL-----PFQKSPLVEAMLYGTLLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F VN AAIECIH YSL+HDDLP+MD+ +RRG+PT HI++ E +AI+AG+ Sbjct: 57 EMFGVNPTALDAPAAAIECIHAYSLMHDDLPAMDDDDLRRGQPTCHIRFGEASAILAGDA 116 Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I+S + + R ++ L G+ GM GGQ LD++ E +D + Sbjct: 117 LQTLAFSILSDAPMENVALRDRLAMVSELAKASGVAGMCGGQALDLEAEGQQVDLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRMGALCAGDKGRDALVYLDSYAESIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|83952381|ref|ZP_00961112.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM] gi|83836054|gb|EAP75352.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM] Length = 333 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 9/225 (4%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 +++ ++ + + M ++H R+ + + GGK++R L A++ Sbjct: 15 ARQFAPKMEAVNALIRARMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAAICGYEGDH 74 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 R+ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L + +F+++ Sbjct: 75 DERLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLM 132 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 + +R +L+ +G + Q+ +D E + + KT AL Sbjct: 133 VETGS-----LRVLDILANASATIAEGEVL-QLTASRDIATTEATYLQVVRGKTAALFSA 186 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A E G ++A AS L +G+ LGI FQ+ADDLLD + D K Sbjct: 187 ATEVGGVIAGASDEVTGALYDYGDALGIAFQIADDLLDFQGDSAK 231 >gi|78042835|ref|YP_360049.1| heptaprenyl diphosphate synthase component II [Carboxydothermus hydrogenoformans Z-2901] gi|77994950|gb|ABB13849.1| heptaprenyl diphosphate synthase component II [Carboxydothermus hydrogenoformans Z-2901] Length = 326 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 15/231 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L ++E+ ++I+ +L+ + + + H+ A+ GGK++R A L Sbjct: 11 LFELVKEDLRKIEQ---ELIKEVSERNEFLHDP----AMHLLKAGGKRLRPAFALLAAKL 63 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + + A+E IH +L+HDD+ +DN +RRG PTV + +I G+ + Sbjct: 64 GDYDFEKVKPLAVALELIHMATLVHDDV--VDNSMLRRGLPTVKANWGNKMSIHIGDRIF 121 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + +I S K + +++ + +T Q+ ++ + K K Sbjct: 122 AKSLLLIDSCKNNYVAKVLAEVSVKMTTGEI------QQLNGAKNISTSIKDYLIKIKRK 175 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 T L+ +CE G +MA+ S L+ +G +G+ FQ+ DD+LD D Sbjct: 176 TALLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEK 226 >gi|152998234|ref|YP_001343069.1| polyprenyl synthetase [Marinomonas sp. MWYL1] gi|150839158|gb|ABR73134.1| Polyprenyl synthetase [Marinomonas sp. MWYL1] Length = 326 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 19/233 (8%) Query: 15 RIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECA----SLFN 66 +I ++ + Q ++ +Q + L+ I Y ++ GGK++R LV A L Sbjct: 5 QIHDVVANEFGQVNDYIVSQLSSDIPLIEQIGYYIISNGGKRLRPLLVLLAAKASAELDK 64 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 A+++ IE IH +L+HDD+ +D +RRGK T + ++ +++ G+ L + Sbjct: 65 PKLDQAIQMATIIEFIHTSTLLHDDV--VDESDMRRGKKTANEEWGNAPSVLVGDFLYSR 122 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+I+ + ++ +L+ T NI +G + Q+++ D E + + KT Sbjct: 123 AFQIMVDVGS-----MQCMSVLAKTTNIIAEGEV-QQLINCGDPDTTEESYLKVIQYKTA 176 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 L A GA++A AS+ +E LR FG +G FQL DD++D E++ K Sbjct: 177 KLFEGAALCGAVIAGASKEHQEALRQFGMYVGTAFQLIDDVMDYTSTAEEMGK 229 >gi|291465068|gb|ADE06004.1| polyprenyl synthase [Rhodobacter sphaeroides 2.4.1] Length = 333 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 14/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 + + L E+ ++ ++ + + + + L+ A GGK++R L A L Sbjct: 14 IVAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 67 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D + RRGKPT ++ +D ++++ G+ L Sbjct: 68 CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 125 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 +F+++ + +R +L+ +G + Q+ QD E + + K Sbjct: 126 ARSFQLMVETGS-----LRVMDILANASATISEGEVL-QLTAAQDLRTTEDIYLQVVRGK 179 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T AL A E G ++A + + E L +G+ LGI FQ+ DDLLD Sbjct: 180 TAALFAAATEVGGVVAGVPEAQVEALHAYGDALGIAFQIVDDLLDYGG 227 >gi|293602311|ref|ZP_06684757.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC 43553] gi|292819073|gb|EFF78108.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC 43553] Length = 321 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 114/236 (48%), Gaps = 16/236 (6%) Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59 MN L + + ++ K +D ++ + L ++T + + + GGK++R +V Sbjct: 1 MNLPALIAPIADDMKAVDAVIRERLNSDVVLIRTIGDYIIGA-------GGKRMRPAMVL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A +E IH +L+HDD+ +D +RRG+ T + + +++ Sbjct: 54 MVARALGYEGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETANAVFGNAASVLV 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + +FE++ D++R +LS + +G + Q+L++ D + + + Sbjct: 112 GDYLYSRSFEMMVEA-----DSMRIMSILSEATTVIAEGEVL-QLLNVHDPDVSQDRYLQ 165 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + KT L A + GA++A A+ ++ +G ++G FQL DD+LD D Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAA 221 >gi|227823787|ref|YP_002827760.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii NGR234] gi|227342789|gb|ACP27007.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii NGR234] Length = 360 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 113/234 (48%), Positives = 161/234 (68%), Gaps = 3/234 (1%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 P +L+ + ++++L +LL +A + +LL A+R+ L GGK++R FLV E + Sbjct: 64 FPERLKAAALAVESLLSNLLGPSAQADEIARPAQLLDAMRHGVLNGGKRLRPFLVAESTA 123 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 124 LLGGSADAALRIGAALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDSL 183 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181 LT+AF+I+++P+T L D ++ L+L+L GL GM GGQ LD+ E DE + +Q Sbjct: 184 LTFAFDIVAAPETPLSDGQKTALVLALARAAGLGGMAGGQALDLAAEKTAPDEAAIVTLQ 243 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 MKTGAL+ FACE+GAI+A A ++ RLR FGE +G+ FQLADDLLD D Sbjct: 244 AMKTGALIRFACEAGAIIADAGLEDRRRLRAFGEKIGLAFQLADDLLDLTADAE 297 >gi|241889564|ref|ZP_04776862.1| geranyltranstransferase [Gemella haemolysans ATCC 10379] gi|241863186|gb|EER67570.1| geranyltranstransferase [Gemella haemolysans ATCC 10379] Length = 286 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 121/239 (50%), Gaps = 13/239 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59 MN ++ N +++ D + + + D L +I Y+L+ GKKIR Sbjct: 1 MN-NFKLFIETNKDKLNAFAKDYVEKL------EMPDILKESITYSLVNDGKKIRPLSFL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + + + AIE +H YSL+HDDLP MDN R GK T H Y + A++ Sbjct: 54 YLLKFYGIEYSKYFDIALAIELVHTYSLVHDDLPEMDNDDYRWGKYTNHKVYGQDVAVLT 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ +LT AFE++S +K +++ +L+ + G GM+ GQ+ D ++ +D + Sbjct: 114 GDAMLTLAFEVLSDA--DVKPDLKVRLIKQFANYSGAMGMIAGQIYDVKQKNYDVDADYL 171 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +KTG L+ + ++A+ + + ++ FG+ LGI +Q+ DD+LD D K Sbjct: 172 RKMHSLKTGRLIELPLDFACLVAN-KLEDYDDVKEFGQQLGIAYQIKDDILDYYGDFEK 229 >gi|156935030|ref|YP_001438946.1| geranyltranstransferase [Cronobacter sakazakii ATCC BAA-894] gi|156533284|gb|ABU78110.1| hypothetical protein ESA_02881 [Cronobacter sakazakii ATCC BAA-894] Length = 299 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ ++R + L + + L+ A+ Y LLGGK++R FLV Sbjct: 2 DFSQQLQAQAERANRALQHFIGEL-----PFQKSPLVEAMLYGTLLGGKRLRPFLVYATG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F VN AAIECIH YSL+HDDLP+MD+ +RRG+PT HI++ E +AI+AG+ Sbjct: 57 EMFGVNPTALDAPAAAIECIHAYSLMHDDLPAMDDDDLRRGQPTCHIRFGEASAILAGDA 116 Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I+S + + R ++ L G+ GM GGQ LD++ E +D + Sbjct: 117 LQTLAFSILSDAPMENVALRDRLAMVSELAKASGVAGMCGGQALDLEAEGQQVDLDALER 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A GA+ A + L + +++G+ FQ+ DD+LD D L Sbjct: 177 IHRHKTGALIRAAVRMGALCAGDKGRDALVYLDSYADSIGLAFQVQDDILDVVGDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|253991517|ref|YP_003042873.1| octaprenyl diphosphate synthase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638395|emb|CAR67017.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase (opp synthetase) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782967|emb|CAQ86132.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase (opp synthetase) [Photorhabdus asymbiotica] Length = 323 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 14/222 (6%) Query: 21 DDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGA 77 DD+ + + ++D L++ + Y ++ GGK+IR + A + V A Sbjct: 12 DDMAAVNEAILSQLNSDVALINQLGYYIISGGGKRIRPIIAILAARALGYQSDKHITVAA 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++++ + Sbjct: 72 LIEFIHTATLLHDDV--VDESDMRRGKATANATFGNAASVLVGDFIYTRSFQMMTTLNS- 128 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 +R ++S N+ +G + Q+++ D I E + KT L A S A Sbjct: 129 ----MRVLKLMSEATNVIAEGEVL-QLMNCNDPNISEDDYMRVIYSKTARLFEVAAHSSA 183 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 I+++A+ ++ L+ +G LG FQL DDLLD + D L K Sbjct: 184 IISNATPEQETALQDYGRYLGTAFQLIDDLLDYDADSNTLGK 225 >gi|90420298|ref|ZP_01228206.1| putative geranyltranstransferase [Aurantimonas manganoxydans SI85-9A1] gi|90335632|gb|EAS49382.1| putative geranyltranstransferase [Aurantimonas manganoxydans SI85-9A1] Length = 300 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 111/234 (47%), Positives = 148/234 (63%), Gaps = 5/234 (2%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 ++L E + + L D L + RLL+A+R+ AL GGK++R FLV E A Sbjct: 6 FQARLSEAADLTEARLADCLAGAHGSVAGA-PARLLAAMRHGALGGGKRLRPFLVIESAR 64 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF + A+ A+ECIHCYSL+HDDLPSMD+ +RRGKPTVH YDE TAI+AG+GL Sbjct: 65 LFGADLQAAIGAATALECIHCYSLVHDDLPSMDDDDLRRGKPTVHRAYDEATAILAGDGL 124 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT AF +++ + L R L+ L + G GM+GGQ+LD+ E + E ++ +Q Sbjct: 125 LTLAFGLVAG-EEGLSPKARVALVALLARDAGAAGMVGGQVLDLAAENAVLSEDEIARMQ 183 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 MKTGAL+ FACE+GAI+A A E+ RLR FGE +G+ FQLADDLLD D Sbjct: 184 AMKTGALIAFACEAGAIVADAGAAERARLRRFGEIVGLAFQLADDLLDETADAA 237 >gi|330998275|ref|ZP_08322100.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841] gi|329568664|gb|EGG50465.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841] Length = 327 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 107/227 (47%), Gaps = 14/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + A + L IRY L +GGK+IR L+ +L+ Sbjct: 6 EVLDYINGEIAGMSFERQPAELYEPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEEIGFQA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H Y+L+HDDL MD +RRG TVH ++D+ AI++G+ +L A+ + Sbjct: 66 VAIEIYHNYTLLHDDL--MDRADMRRGMATVHKKWDDNAAILSGDSMLVMAYRYMQQ--- 120 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 +M T G GQ D++ E + E + + ++KT L+ A Sbjct: 121 GCPAEHLGDVMSLFTETALEIGE--GQQYDMEFEARADVSEEEYIEMIRLKTSVLLACAL 178 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GA + A + + E L FGENLG+ FQL DD LD D KK Sbjct: 179 KIGAWLGGAPRQDAELLYRFGENLGLAFQLQDDYLDVYGDPAVFGKK 225 >gi|329961528|ref|ZP_08299609.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057] gi|328531740|gb|EGF58569.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057] Length = 324 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 16/222 (7%) Query: 22 DLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LL + SH+ T+ L + Y L +GGK+IR L+ +L+ + Sbjct: 6 ELLEKINSHIADLKFTRTPQGLYDPVSYVLSMGGKRIRPVLMLMAYNLYKEDLARIYGPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A+ ++ Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLVLAYRFMAQCPV 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193 + L+ + GQ +D++ E + E + + ++KTG L+ + Sbjct: 124 DCLKEVMELFSLT------ALEICEGQQMDMEFELRKDVREEEYLEMIRLKTGVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GA++ AS + L FG NLG+ FQL DDLLD D+ Sbjct: 178 KIGALLGGASAEDAGHLYDFGMNLGVAFQLKDDLLDVYGDVA 219 >gi|319903089|ref|YP_004162817.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108] gi|319418120|gb|ADV45231.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108] Length = 324 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 19/229 (8%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69 E K+I++ + DL T+ L + + Y L +GGK+IR L+ +L+ + Sbjct: 6 EILKKINSHIADLKF-------TRTPQGLYAPVSYVLSMGGKRIRPVLMLMSYNLYKEDI 58 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + A IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A++ Sbjct: 59 VRAYGPAIGIEVYHNYTLLHDDL--MDCADRRRGKKTVHKVWNDNTAILSGDAMLVLAYQ 116 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTG 186 ++ + L+ + GQ +D++ E + E + + ++KT Sbjct: 117 YMAQCPAGYLKEVMDLFSLT------ALEICEGQQMDMEFELRKDVKEGEYLEMIRLKTS 170 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + + GA++ AS + E L FG NLGI FQL DDLLD D Sbjct: 171 VLLAASLKIGALLGGASAEDAEHLYNFGMNLGIAFQLKDDLLDVYGDAA 219 >gi|120437409|ref|YP_863095.1| isoprenyl synthetase [Gramella forsetii KT0803] gi|117579559|emb|CAL68028.1| isoprenyl synthetase [Gramella forsetii KT0803] Length = 324 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 12/222 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 I + ++ ++ + L + Y L GGK++R LV +F+ N+ AL Sbjct: 4 ISQYREAIIDYLHEKIKVKEPANLYEPMVYILEQGGKRLRPVLVLMATEIFDCNYKKALD 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 AIE H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +L A+++ S Sbjct: 64 AALAIEIFHNFSLVHDDI--MDDAPLRRGKETVHEKWDINTGILSGDAMLINAYQLFESY 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF 191 + LS + GQ DI E D + + KT L+ Sbjct: 122 EGDTFKE------LSKLFTKTAIEVCEGQQYDIDFETRDNVSIENYLKMIEYKTAVLVGA 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + GAI+A S KE + +G LGI FQL DD LD D Sbjct: 176 SLQMGAIVAQTSTACKEAIYQYGRLLGIAFQLQDDYLDAFGD 217 >gi|328541834|ref|YP_004301943.1| Geranyltranstransferase protein [polymorphum gilvum SL003B-26A1] gi|326411586|gb|ADZ68649.1| Geranyltranstransferase protein [Polymorphum gilvum SL003B-26A1] Length = 303 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 105/235 (44%), Positives = 147/235 (62%), Gaps = 3/235 (1%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 + L + L E + R++ +L D L +T+ RL+ A+R+A L GGK++R L+ Sbjct: 3 VTERLEAHLAEVAGRMEAVLADALAPAPKDGETERPSRLVEAMRHAALGGGKRLRPVLMV 62 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E A LF R AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE TAI+A Sbjct: 63 ETARLFGRADDGVYRAAAALECIHCYSLVHDDLPAMDDDDLRRGRPTVHKAFDEATAILA 122 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ LLT AF++I+ +R +L L G+ GM GGQMLD++ E ET++ Sbjct: 123 GDALLTLAFDLIAEAPVHPDPAVRLRLSQELARAAGVGGMAGGQMLDLEAEHRVRSETEI 182 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q MKTGAL+ +AC +GAI+A A + R+ FGE +G+ FQLADDLLD E Sbjct: 183 RTLQAMKTGALLRYACRAGAILADAGAEDVARMTRFGEVVGLAFQLADDLLDLEA 237 >gi|54295170|ref|YP_127585.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens] gi|53755002|emb|CAH16490.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens] Length = 298 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 11/230 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + + ++R + L+ LL + ++ SA+ YAL GGK+IR LV L +V Sbjct: 6 IDKYTQRHELYLEQLLNEIVIP-----APQIRSALHYALFSGGKRIRPILVYLAGDLIDV 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + AA+E HCYSLIHDDLP+MDN +RRGKP+ H +DE TAI+ G+G+ A Sbjct: 61 DQEVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALA 120 Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKM 183 E ++ L + L + G+ GM+ GQ LD+ + + E Q+ I + Sbjct: 121 IEVVLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLL 180 Query: 184 KTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTG L+ E A S+ K LR +G+++G++FQ+ DD LD Sbjct: 181 KTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYA 230 >gi|194290791|ref|YP_002006698.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424] gi|193224626|emb|CAQ70637.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424] Length = 345 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 108/229 (47%), Gaps = 15/229 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L + + + + +D ++ L ++ Q + ++ A GGK++R ++ A Sbjct: 28 ALLAPVAADMRAVDAVIRQRLSSEVPLIE-QIGEYIIGA------GGKRLRPVILLLTAR 80 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 81 ALGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTANAVFGNAASVLVGDFL 138 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + AF+++ + +R +LS N+ +G + Q+L++ D + + + + Sbjct: 139 YSRAFQMMVDAGS-----MRIMEILSNATNVIAEGEVL-QLLNMHDPDVTVERYLQVIRY 192 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L A + GA+++ A +E +G +G FQL DD+LD Sbjct: 193 KTAKLFEAAAQLGAVLSGADAQMEEAAAEYGRRIGTAFQLIDDMLDYTA 241 >gi|149928102|ref|ZP_01916349.1| geranyltranstransferase [Limnobacter sp. MED105] gi|149823188|gb|EDM82425.1| geranyltranstransferase [Limnobacter sp. MED105] Length = 300 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 119/239 (49%), Gaps = 13/239 (5%) Query: 1 MNGGLP---SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56 MN P + E + +L D L Q + L +A+ YALL GGK++R+ Sbjct: 1 MNYAQPIQLNWFDETRAGFEAVLADKLKQFEGP-----SSELNAAMEYALLDGGKRLRAM 55 Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 LV +IE +H YSL+HDDLPSMDN +RRGKPT H+++ E A Sbjct: 56 LVFAAGYAVETPTSQLNDAACSIEAMHAYSLVHDDLPSMDNDVLRRGKPTCHVKFGEAFA 115 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDE 174 ++AG+ L T AF+ ++ Q +R Q + +L GLQGM GQ +D + +D Sbjct: 116 LLAGDALQTAAFQWLAES-NQGSVQVRMQQIAALASAAGLQGMAAGQAIDLAHVGKPMDL 174 Query: 175 TQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + KTG L+ + G + A S EK L + LG+ +Q+ DD+LD E Sbjct: 175 QSLATMHARKTGDLITASVRMGYVSNATLSAVEKNGLEAYAHCLGLAYQVIDDILDVES 233 >gi|126463166|ref|YP_001044280.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC 17029] gi|332559215|ref|ZP_08413537.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N] gi|126104830|gb|ABN77508.1| Trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC 17029] gi|332276927|gb|EGJ22242.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N] Length = 333 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 14/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + L E+ ++ ++ + + + + L+ A GGK++R L A L Sbjct: 14 LAAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 67 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D + RRGKPT ++ +D ++++ G+ L Sbjct: 68 CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 125 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 +F+++ + +R +L+ +G + Q+ QD E + + K Sbjct: 126 ARSFQLMVETGS-----LRVMDILANASATISEGEVL-QLTAAQDLRTTEDIYLQVVRGK 179 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T AL A E G ++A + + E L +G+ LGI FQ+ DDLLD Sbjct: 180 TAALFAAATEVGGVVAGVPEAQVEALHAYGDALGIAFQIVDDLLDYGG 227 >gi|330823512|ref|YP_004386815.1| trans-hexaprenyltranstransferase [Alicycliphilus denitrificans K601] gi|329308884|gb|AEB83299.1| Trans-hexaprenyltranstransferase [Alicycliphilus denitrificans K601] Length = 349 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 111/232 (47%), Gaps = 15/232 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61 + + ++ + +D ++ L Q++ + ++SA GGK++R L+ Sbjct: 30 TAATLALIADDMREVDKVIAARL-QSSVPLVGSVAQYIISA------GGKRLRPALLLLT 82 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + A +E IH +L+HDD+ +D +RRG+PT + + +++ G+ Sbjct: 83 CGALEYKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANEAFGNPASVLVGD 140 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L T +F+++ + +R +L+ N+ +G + Q+++ D +DE + Sbjct: 141 FLHTRSFQMMVEAGS-----MRILQVLADATNVIAEGEV-QQLMNTHDASLDEAGYLHVI 194 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT L + AI+A ++ + ++ +G+ LG FQ+ DD+LD + D Sbjct: 195 RSKTAKLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVLDYDGD 246 >gi|313890735|ref|ZP_07824360.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026] gi|313120836|gb|EFR43950.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026] Length = 289 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 83/203 (40%), Positives = 118/203 (58%), Gaps = 6/203 (2%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLP 93 ++ L++AIRY+ GGK+IR L+ E F+V + V AA+E IH SLIHDDLP Sbjct: 22 SEHLIAAIRYSAEAGGKRIRPLLLLELLEAFSVTLTDSHYDVAAALEMIHTGSLIHDDLP 81 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MDN RRG+ T H ++DE TAI+AG+ L AF +I+ T L NI+ LM L+H+ Sbjct: 82 AMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDAFALIAE--TNLSANIKVDLMHCLSHS 139 Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 G GM+GGQMLD++ E + T + I + KTG L+ + + A +A + L Sbjct: 140 SGTFGMVGGQMLDMKAEGQELALTDLQEIHRHKTGCLLAYPFWAAAKIADVDEEILLDLY 199 Query: 212 CFGENLGIIFQLADDLLDCEEDL 234 G +G FQ+ DD+LD D Sbjct: 200 QAGLKVGHAFQVRDDILDVTADF 222 >gi|161870803|ref|YP_001599976.1| geranyltranstransferase [Neisseria meningitidis 053442] gi|161596356|gb|ABX74016.1| geranyltranstransferase [Neisseria meningitidis 053442] Length = 298 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 8/237 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L V H + AAIE IH YSL+HDD+P+MDN +RRGKPT H+QYDE TA++ G Sbjct: 59 ASELGGVVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 + L T AF+++S P + +L+ L + + + + Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA S E L + LG+ FQ+ DD+LDCE D Sbjct: 179 MHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTA 235 >gi|269138336|ref|YP_003295036.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202] gi|267983996|gb|ACY83825.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202] gi|304558368|gb|ADM41032.1| Geranyltranstransferase [Edwardsiella tarda FL6-60] Length = 301 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 87/239 (36%), Positives = 127/239 (53%), Gaps = 10/239 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 +++ +R D L L + L+ A+RY ALLGGK++R +LV Sbjct: 2 ASFEQQMKTCRQRADAALIQALDTL-----PFADGPLVGAMRYGALLGGKRLRPYLVYAT 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 LF + AA+ECIH YSL+HDDLP+MD+ +RRG+PT HI++ E AI+AG+ Sbjct: 57 GGLFGCSPTALDAPAAAVECIHAYSLLHDDLPAMDDDDLRRGQPTCHIKFGEAHAILAGD 116 Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178 L T AF I++ P + D R Q++ L H G+ GM GGQ LD++ E + + Sbjct: 117 ALQTLAFSILADGPMPGVADRDRLQMLSELAHASGVAGMCGGQALDLEAEGRHVALAALE 176 Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTGAL+ A GA+ A + L + +G+ FQ+ DD+LD D K Sbjct: 177 QIHRHKTGALIRCAVRMGALAGGDAGRRALPALDRYAAAIGLAFQVQDDILDVVGDSSK 235 >gi|157827248|ref|YP_001496312.1| octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389] gi|157802552|gb|ABV79275.1| Octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389] Length = 327 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 63/220 (28%), Positives = 120/220 (54%), Gaps = 11/220 (5%) Query: 15 RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70 +I L D + Q + + + + ++ L+ + +Y L GGK+IR L A +F+ N Sbjct: 6 KIQQDLKDEVAQLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYNGD 65 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + +F++ Sbjct: 66 SHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 123 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 + + + I++ +L+ I +G + + + I+ + I K KT L Sbjct: 124 MVASGS-----IKAMNVLAKASAIISKGEVVQLVKLNERRLINIEEYQQIVKSKTAELFG 178 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +C GAI+A+ S + + + FG+ LG IFQ+ DDLLD Sbjct: 179 ASCSVGAIIANQSDDISKNMEEFGKLLGTIFQVIDDLLDY 218 >gi|89255952|ref|YP_513314.1| geranyltranstransferase [Francisella tularensis subsp. holarctica LVS] gi|115314435|ref|YP_763158.1| geranyltranstransferase [Francisella tularensis subsp. holarctica OSU18] gi|167009142|ref|ZP_02274073.1| geranyltranstransferase [Francisella tularensis subsp. holarctica FSC200] gi|169656540|ref|YP_001428011.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367309|ref|ZP_04983335.1| geranyltranstransferase [Francisella tularensis subsp. holarctica 257] gi|254368783|ref|ZP_04984796.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp. holarctica FSC022] gi|290954603|ref|ZP_06559224.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica URFT1] gi|295311946|ref|ZP_06802770.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica URFT1] gi|89143783|emb|CAJ78986.1| Geranyltranstransferase [Francisella tularensis subsp. holarctica LVS] gi|115129334|gb|ABI82521.1| geranyltranstransferase [Francisella tularensis subsp. holarctica OSU18] gi|134253125|gb|EBA52219.1| geranyltranstransferase [Francisella tularensis subsp. holarctica 257] gi|157121704|gb|EDO65874.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp. holarctica FSC022] gi|164551608|gb|ABU61055.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 293 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 7/221 (3%) Query: 17 DTILDDL--LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 + I+ D + + LLSA+ Y+ GGK+IR+ V ++ Sbjct: 4 ENIIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCD 63 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ A+E IH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L AFEI+ Sbjct: 64 KIAFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQD 123 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191 D ++ ++ G GM+GGQ LDI+ E + ++ ++ KT + Sbjct: 124 INYSDIDKLK-KINKLFAQYCGASGMVGGQQLDIEGENKKLKIEELQILHINKTAKMFRA 182 Query: 192 ACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231 I++ + + ++ L + +G+ FQ+ DD+LD Sbjct: 183 CIVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVT 223 >gi|227328594|ref|ZP_03832618.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 296 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S +I+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|150402965|ref|YP_001330259.1| polyprenyl synthetase [Methanococcus maripaludis C7] gi|150033995|gb|ABR66108.1| Polyprenyl synthetase [Methanococcus maripaludis C7] Length = 317 Score = 194 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 19/229 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 +E +ID+ L + + + L SA ++ LL GGK++R +L L + Sbjct: 5 REILSKIDSELKKYMEK---------DTNLYSASKHLLLAGGKRVRPYLSIITYLLKKDD 55 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + ++E IH Y+L+HDD+ MDN RRG PTVH Y E AI+AG+ L AF Sbjct: 56 INEIMAPALSVELIHNYTLVHDDI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAF 113 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186 E +S+ K + +++ + + GQ D++ E F + F + KTG Sbjct: 114 EALSNIGDSKKAHEVLKVL-----SKACVEVCEGQTDDMEFEERFPTLDEYFDMISKKTG 168 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 AL+ E GAIMA + E+ L + + +G+ FQ+ DD+LD D Sbjct: 169 ALIVAPVEIGAIMAECTPEERNALCNYAKRIGMTFQIQDDVLDLIGDQK 217 >gi|89070187|ref|ZP_01157515.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516] gi|89044203|gb|EAR50354.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516] Length = 332 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 13/234 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTAS----HMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58 L + + + +R+ L D L + MQ++H R+ + + GGK++R L Sbjct: 2 SLDAAVTKPHERLAEALSDDLAAVNALIRERMQSEHAPRIPEVTAHLVEAGGKRLRPMLT 61 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 A L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ Sbjct: 62 LAAARLCGYDGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNQSSVL 119 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 G+ L +F ++ N+ +LS +G + Q+ + DE Sbjct: 120 VGDYLFAKSFLLMVDTG-----NLDVLRILSQASATIAEGEVL-QLTASRSLATDEAVYM 173 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + KT AL A E G ++A L +G+ LGI FQ+ DDLLD E Sbjct: 174 KVIRGKTAALFSAATEVGGVIAGQGPEVCRALFDYGDALGIAFQIVDDLLDYEG 227 >gi|317401225|gb|EFV81869.1| octaprenyl-diphosphate synthase [Achromobacter xylosoxidans C54] Length = 321 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 114/236 (48%), Gaps = 16/236 (6%) Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59 MN L + + ++ K +D ++ + L ++T + + + GGK++R +V Sbjct: 1 MNLPALIAPIVDDMKAVDAVIRERLNSDVVLIRTIGDYIIGA-------GGKRMRPAMVL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A +E IH +L+HDD+ +D +RRG+ T + + +++ Sbjct: 54 MVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETANAVFGNAASVLV 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + +FE++ D++R +LS + +G + Q+L++ D + + + Sbjct: 112 GDYLYSRSFEMMVEA-----DSMRIMSILSEATTVIAEGEVL-QLLNVHDPDVSQERYLQ 165 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + KT L A + GA++A A+ ++ +G ++G FQL DD+LD D Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAA 221 >gi|239947339|ref|ZP_04699092.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921615|gb|EER21639.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes scapularis] Length = 326 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 65/227 (28%), Positives = 120/227 (52%), Gaps = 15/227 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLF 65 K+Q++ + T L+DL++ ++ L+ + +Y L GGK+IR L A +F Sbjct: 6 KIQQDLDEV-TKLNDLIISCLK-----SDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 59 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +++ +A+E IH +L+HDD+ +D+ +RR KPT +I + T+I+ G+ L + Sbjct: 60 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANIIWGSKTSILVGDFLFS 117 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 +F+++ + + I++ +L+ I +G + + + I + I K KT Sbjct: 118 QSFKLMIASGS-----IKAMNVLAKASAIISEGEVVQLVKLNERRIITIEEYQQIVKSKT 172 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L +CE GAI+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 173 AELFGASCEVGAIIAEQLDHVSKDMQDFGKLLGTIFQVIDDLLDYWG 219 >gi|89901647|ref|YP_524118.1| polyprenyl synthetase [Rhodoferax ferrireducens T118] gi|89346384|gb|ABD70587.1| farnesyl-diphosphate synthase [Rhodoferax ferrireducens T118] Length = 314 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 11/244 (4%) Query: 3 GGLPSKLQENSKRIDTILDD-LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L + + +++ L+ + A+ + L++A+RYA+L GGK++R LV Sbjct: 7 FNLSAWSALHLAHVESALERWVRPDAATDAEGGAPVELMAAMRYAVLDGGKRLRPLLVLA 66 Query: 61 CASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113 + + A LR A+E IH YSL+HDDLP MDN +RRGK TVH+++ E Sbjct: 67 ASEAASGERPAAANTPEIALRAACAVELIHAYSLVHDDLPCMDNDVLRRGKATVHVKFGE 126 Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEF 171 +A++AG+ L AFE+++ + ++ +L+ L Sbjct: 127 ASAMLAGDALQAMAFELLTPDDDAIPARQQAALCRLLARAAGSAGMAGGQAIDLASVGVA 186 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + E Q+ + ++KTGAL+ + GA S + L +G +G+ FQ+ DD+LD Sbjct: 187 LTERQLRQMHRLKTGALLQASVMMGAACGDVSAQAEAALMSYGAAIGLAFQVVDDMLDVT 246 Query: 232 EDLP 235 D Sbjct: 247 ADSA 250 >gi|67459231|ref|YP_246855.1| octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2] gi|67004764|gb|AAY61690.1| Octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2] Length = 327 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 66/225 (29%), Positives = 120/225 (53%), Gaps = 14/225 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLF 65 K+Q++ K T L+DL++ ++ L+ + +Y L GGK+IR L A +F Sbjct: 6 KIQQDLKDEVTKLNDLIISCLK-----SDEELIETVGKYLLEAGGKRIRPLLTIITAKMF 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + Sbjct: 61 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 118 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 +F+++ + + I++ +L+ I +G + + + I + I K KT Sbjct: 119 QSFKLMVASGS-----IKAMNVLAKASAIISEGEVIQLVKLNERRIITIDEYQQIVKSKT 173 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 L +CE GAI+A + + +R FG+ LG IFQ+ DDLLD Sbjct: 174 AELFGASCEVGAIIAEQVDHISKDMRDFGKLLGTIFQVIDDLLDY 218 >gi|45357608|ref|NP_987165.1| bifunctional short chain isoprenyl diphosphate synthase [Methanococcus maripaludis S2] gi|45047168|emb|CAF29601.1| bifunctional short chain isoprenyl diphosphate synthase [Methanococcus maripaludis S2] Length = 317 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 70/229 (30%), Positives = 113/229 (49%), Gaps = 19/229 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 +E +ID+ L + + + +L A ++ LL GGK++R +L L Sbjct: 5 REILSKIDSELKKYMEK---------DTKLYGASKHLLLAGGKRVRPYLSILTYLLKKDE 55 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + ++E IH Y+L+HDD+ MDN RRG PTVH Y E AI+AG+ L AF Sbjct: 56 LTEIMAPALSVELIHNYTLVHDDI--MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAF 113 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186 E +S+ + K + +++ + + GQ D++ E F + + KTG Sbjct: 114 EALSNIEDSNKAHEVLKVL-----SKACVEVCEGQTEDMEFEERFPTLDEYLEMISKKTG 168 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 AL+ E GA+MA + E+E L + + +G+ FQ+ DD+LD D Sbjct: 169 ALIVAPVEIGAVMADCTPEEREALCNYAKRIGMTFQIQDDVLDLIGDQK 217 >gi|110590588|pdb|2H8O|A Chain A, The 1.6a Crystal Structure Of The Geranyltransferase From Agrobacterium Tumefaciens Length = 335 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 111/235 (47%), Positives = 155/235 (65%), Gaps = 3/235 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 ++L+EN+ + + +L LL A + LL A+R+ L GGK++R FLV E Sbjct: 38 NFETRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESV 97 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +L + L VGAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVH ++DE TAI+AG+ Sbjct: 98 ALLGGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDS 157 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180 LLT AF+II+S L ++ L++SL G+ GM GGQ LD+ E DE + + Sbjct: 158 LLTLAFDIIASDDNPLAAERKAALVISLARAAGIGGMAGGQALDLAAEKKAPDEDGIITL 217 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q MKTGAL+ FACE+GAI+A ++Q E++RLR FGE +G+ FQLADDLLD D Sbjct: 218 QAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTADAA 272 >gi|294340091|emb|CAZ88459.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Thiomonas sp. 3As] Length = 326 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 13/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 +N L ++ R +++ + + +L A+ YA +GGK++R LV Sbjct: 24 LNHSFDHWLHQHQARAQQLIERFVPPEHPLVP-----QLHEAMHYAAAMGGKRVRPLLVW 78 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + R A+E +H YSL+HDDLP MD+ +RRG+PT H+++ E A++A Sbjct: 79 AAGECVQADDQALDRAACAVELVHAYSLVHDDLPCMDDDVLRRGQPTTHVRFGEALALLA 138 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ L A+E++ +P+ + ++++L L G GM GGQ LDI + + Sbjct: 139 GDALQALAYEVL-TPEADIAPALQARLCALLARASGADGMAGGQTLDILATGGAVSGDDL 197 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKE----RLRCFGENLGIIFQLADDLLDCEED 233 + KTGAL+ + GA L +G+ +G+ FQ+ DD+LD D Sbjct: 198 MHMHSRKTGALLKASVLMGAACGGFDTAHPAQTYTALETYGDAVGLAFQVVDDILDVTAD 257 >gi|52842540|ref|YP_096339.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629651|gb|AAU28392.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 309 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 11/230 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + + ++R + L+ LL + ++ SA+ YAL GGK+IR LV L +V Sbjct: 17 IDKYTQRHELYLEQLLNEIIIP-----APQIRSALHYALFSGGKRIRPILVYLAGDLIDV 71 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + AA+E HCYSLIHDDLP+MDN +RRGKP+ H +DE TAI+ G+G+ A Sbjct: 72 DQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALA 131 Query: 128 FEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKM 183 E++ L + L + G+ GM+ GQ LD+ + + E Q+ I + Sbjct: 132 IEVLLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLL 191 Query: 184 KTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTG L+ E A S+ K LR +G+++G++FQ+ DD LD Sbjct: 192 KTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYA 241 >gi|238750110|ref|ZP_04611613.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380] gi|238711654|gb|EEQ03869.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380] Length = 323 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAILVARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMSDATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A++A+AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLANASEEQEVALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED---LPK 236 D D L K Sbjct: 215 DYSSDGVTLGK 225 >gi|293393170|ref|ZP_06637485.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582] gi|291424316|gb|EFE97530.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582] Length = 381 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 101 GGKRIRPMIAVLAARALQYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 158 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q++++ Sbjct: 159 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNVH 212 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI++ A++ +++ L+ +G LG FQL DDLL Sbjct: 213 DPDITEESYMRVIYSKTARLFEAAAQSSAILSGATEAQEQGLQDYGRYLGTAFQLIDDLL 272 Query: 229 DCEED---LPK 236 D D L K Sbjct: 273 DYSADGVTLGK 283 >gi|226329701|ref|ZP_03805219.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198] gi|225202887|gb|EEG85241.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198] Length = 323 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLTGRALDYQGDKHISVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSSATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI++ A+ +++ + +G LG FQL DDLL Sbjct: 155 DPDISEDDYMQVIYSKTARLFEAASHASAILSGATPEQEKAFQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED---LPK 236 D + D L K Sbjct: 215 DYDADNNQLGK 225 >gi|149369615|ref|ZP_01889467.1| putative isoprenoid biosynthesis related protein [unidentified eubacterium SCB49] gi|149357042|gb|EDM45597.1| putative isoprenoid biosynthesis related protein [unidentified eubacterium SCB49] Length = 324 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 99/210 (47%), Gaps = 12/210 (5%) Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86 + L Y L LGGK++R L A F A+ A+E H +S Sbjct: 16 EQAIPVNEPIGLYGPAAYILELGGKRLRPVLTLMTAEFFGSTIEKAMNAALAVELFHNFS 75 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 LIHDD+ MD+ +RRGK TVH ++D T I++G+ +L A+++ + + Sbjct: 76 LIHDDI--MDDAPLRRGKVTVHEKWDLNTGILSGDAMLILAYQLFEGYEAEKFQQ----- 128 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ + + GQ D+ E D+ + + KT L+ A + GAI+A AS Sbjct: 129 -LAKLFSKTALEVCEGQQYDVDFETRDDVTIPEYIKMIDFKTAVLIGAAMKMGAIVAEAS 187 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233 K+ + FG NLGI FQL DD LD D Sbjct: 188 DACKDNIYEFGRNLGIAFQLQDDYLDAFGD 217 >gi|329851866|ref|ZP_08266547.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] gi|328839715|gb|EGF89288.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] Length = 303 Score = 194 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 93/230 (40%), Positives = 135/230 (58%), Gaps = 6/230 (2%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63 L ++ E + + +LD LL + RL A+RYA LG GK++R F E A Sbjct: 13 LLQRMAETADLVTVVLDQLLPRGDGP-----ECRLTEAMRYAALGPGKRLRPFFALETAR 67 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF+ + LR A+ECIH YSL+HDDLP MD+ IRRG+ TVH YDE TA++ G+ L Sbjct: 68 LFDADENAVLRAACALECIHAYSLVHDDLPCMDDDDIRRGRLTVHRAYDEATAVLVGDAL 127 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + AFEI++S T +R +L+ L G QGM GGQM+D+ D V +Q++ Sbjct: 128 QSVAFEILASEDTHDDPLVRCELVRMLAQASGAQGMAGGQMIDLIGVHDDLGGVARMQRL 187 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KTGAL+ +A + ++A + E + F ++LG+ +Q+ADD+LD E D Sbjct: 188 KTGALIVYAFQIPLVVADVGEREGMVMTHFAQDLGLAYQIADDVLDIEGD 237 >gi|262277442|ref|ZP_06055235.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114] gi|262224545|gb|EEY75004.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114] Length = 337 Score = 194 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 22/240 (9%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60 + S QE K++D D + L+ +SH++ L+ + L+ GGK++R L Sbjct: 17 EEIKSAYQEQLKKVD---DHIKLKLSSHVE------LVGEMATHLMSTGGKRLRPLLTIC 67 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + +FN + + A +E IH +L+HDD+ +D RRG T + + ++I+AG Sbjct: 68 SSEIFNYKGNRHINLAACVELIHNATLLHDDV--IDKSESRRGFKTTNAIWGNKSSILAG 125 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + LL+ FE++ +Q I S + + +Q Q+ + E I Sbjct: 126 DYLLSRCFEMMVDDGSQEVLKILSSVSSEIAQGEIMQLQFEKQVDMV------EKNYLDI 179 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 KT +L + G + S EKE L +G NLGI FQ+ DD+LD KK Sbjct: 180 ISAKTASLFGASMRVGGCINDRSNKEKEALESYGRNLGICFQITDDILDYSSKEQVFGKK 239 >gi|296136077|ref|YP_003643319.1| Polyprenyl synthetase [Thiomonas intermedia K12] gi|295796199|gb|ADG30989.1| Polyprenyl synthetase [Thiomonas intermedia K12] Length = 324 Score = 194 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 13/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 +N L ++ R +++ + + +L A+ YA +GGK++R LV Sbjct: 22 LNHSFDHWLHQHQARAQQLIERFVPPEHPLVP-----QLHEAMHYAAAMGGKRVRPLLVW 76 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + R A+E +H YSL+HDDLP MD+ +RRG+PT H+Q+ E A++A Sbjct: 77 AAGECVQADDQALDRAACAVELVHAYSLVHDDLPCMDDDVLRRGQPTTHVQFGEALALLA 136 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+ L A+E++ +P+ + ++++L L G GM GGQ LDI + + Sbjct: 137 GDALQALAYEVL-TPEADIAPALQARLCALLARASGADGMAGGQTLDILATGGAVSGDDL 195 Query: 178 FMIQKMKTGALMCFACESGAIMAHAS----QNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTGAL+ + GA L +G+ +G+ FQ+ DD+LD D Sbjct: 196 MHMHSRKTGALLKASVLMGAACGGFDTARPAQTYTALETYGDAVGLAFQVVDDILDVTAD 255 >gi|160897684|ref|YP_001563266.1| polyprenyl synthetase [Delftia acidovorans SPH-1] gi|160363268|gb|ABX34881.1| Polyprenyl synthetase [Delftia acidovorans SPH-1] Length = 316 Score = 194 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 124/239 (51%), Gaps = 14/239 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 P + + R ++ L + L A+RYA+L GGK++R LV A Sbjct: 21 DFPCWMTDRLARTESALSQ-------WVGVDAPAGLGEAMRYAVLDGGKRLRPLLVWAAA 73 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + A+R G A+E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E +A++AG+ Sbjct: 74 EAVDGLQPAAVRAGCAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEASALLAGDA 133 Query: 123 LLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 L AFE++ + D ++++L L G QGM GGQ +D+ + E Q+ Sbjct: 134 LQALAFELLVPEPDQAGSMPDALQARLCRLLGRAAGAQGMAGGQAIDLASVGLQLSEAQL 193 Query: 178 FMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + ++KTGAL+ + GA + L +G+ LG+ FQ+ DD+LD D Sbjct: 194 REMHRLKTGALLHASVLMGAACKEGVDAQAWQALSDYGQALGVAFQVVDDILDVVADSA 252 >gi|88812690|ref|ZP_01127937.1| geranyltranstransferase [Nitrococcus mobilis Nb-231] gi|88790106|gb|EAR21226.1| geranyltranstransferase [Nitrococcus mobilis Nb-231] Length = 298 Score = 194 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 82/238 (34%), Positives = 125/238 (52%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 L L E R++ L+ L +H RL A+RYA+LGG K++R LV Sbjct: 4 LERYLPEYQARVEAALERWLPPAQTH-----PARLHEAMRYAVLGGGKRMRPLLVYATGD 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + A+E IHCYSL+HDDLP+MD+ +RRG+PT H YDEVTAI+ G+ L Sbjct: 59 ALRLPRQVLDAPACAVELIHCYSLVHDDLPAMDDDDLRRGRPTCHRAYDEVTAILVGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM 179 + AF ++S + + R +++ L+ G +GM GGQ LD + + ++ Sbjct: 119 QSLAFRVLSHCRDGEAGPVQGRLRMIEVLSLAAGSRGMAGGQSLDYEAVGRQVTVAELED 178 Query: 180 IQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTGAL+ + GA+ A+ ERL + + +G+ FQ+ DD+LD D + Sbjct: 179 MHIHKTGALIRASVMLGALADTTANTTCTERLDHYAKCVGLAFQVQDDVLDVIGDEAR 236 >gi|307543898|ref|YP_003896377.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581] gi|307215922|emb|CBV41192.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581] Length = 333 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 12/233 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAI-RYAL-LGGKKIRSFLVTE 60 +P++L I ++ + +QTQ R L+ AI +Y + GGK++R LV Sbjct: 6 VPTQLTTPDTPIHAVVAEDFAAVNRTIQTQLASRIPLVEAIGQYIVDSGGKRMRPLLVLL 65 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + + IE +H +L+HDD+ +D ++RRG+ T + + +++ G Sbjct: 66 AARSLGYEGDQHVALATLIEFMHTSTLLHDDV--VDESHMRRGRATANDAWGNAPSVLVG 123 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + L + +F+++ + +R +LS +G + Q+ ++ + +DE F Sbjct: 124 DFLYSRSFQMMVGVGS-----MRIMEILSAATCTIAEGEV-QQLTNVGNPDVDEAAYFET 177 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT L A GAI+A A+ ++ L+ +G LG+ FQL DDLLD D Sbjct: 178 IQGKTAMLFEAASHCGAIIADATPEQEAALQAYGRYLGLAFQLVDDLLDYRGD 230 >gi|167583904|ref|ZP_02376292.1| Polyprenyl synthetase [Burkholderia ubonensis Bu] Length = 294 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 ++ R++ L L +T +L A+RYA+LGG K++R L Sbjct: 3 FEQWMRSVLDRVEDALGHYLP-----AETVVPAQLHEAMRYAVLGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+ L Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 + AF ++ + L+ L G GM GGQ +D+ + Q+ + Sbjct: 118 QSQAFVALTDADALAPAQQ-AALVRELALASGSIGMAGGQAIDLASVGMKLTREQLETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A GA+ S + L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRAAVRMGALAGETPSADAMAALDVYAAAVGLAFQVVDDILDVTTDSA 231 >gi|288965921|pdb|3LOM|A Chain A, Crystal Structure Of Geranyltransferase From Legionella Pneumophila gi|288965922|pdb|3LOM|B Chain B, Crystal Structure Of Geranyltransferase From Legionella Pneumophila Length = 313 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 11/230 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + + ++R + L+ LL + ++ SA+ YAL GGK+IR LV L +V Sbjct: 13 IDKYTQRHELYLEQLLNEIIIP-----APQIRSALHYALFSGGKRIRPILVYLAGDLIDV 67 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + AA+E HCYSLIHDDLP+MDN +RRGKP+ H +DE TAI+ G+G+ A Sbjct: 68 DQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALA 127 Query: 128 FEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKM 183 E++ L + L + G+ GM+ GQ LD+ + + E Q+ I + Sbjct: 128 IEVLLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLL 187 Query: 184 KTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTG L+ E A S+ K LR +G+++G++FQ+ DD LD Sbjct: 188 KTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYA 237 >gi|212709993|ref|ZP_03318121.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM 30120] gi|212687402|gb|EEB46930.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM 30120] Length = 323 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + ++V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAILAGRSLGYSEHKHIQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+A+A+ +++ L+ +G +G FQL DDLL Sbjct: 155 DPDITEESYMQVIYSKTARLFEAASHASAILANATPEQEKALQDYGRYIGTAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|182418006|ref|ZP_02949312.1| geranyltranstransferase [Clostridium butyricum 5521] gi|237668434|ref|ZP_04528418.1| putative geranyltranstransferase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378177|gb|EDT75712.1| geranyltranstransferase [Clostridium butyricum 5521] gi|237656782|gb|EEP54338.1| putative geranyltranstransferase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 288 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 125/230 (54%), Gaps = 12/230 (5%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 K I+ LD+ + +N + A Y++ +GGK+IR L ++ + Sbjct: 6 RKDINDYLDNYFKN-----KGIYNKVIYDASGYSINIGGKRIRPILFALSYYIYKNEYKN 60 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 L + +IE IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+ LL A ++ Sbjct: 61 ILPMACSIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDNLLNEAMILM 120 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 + N + + + G +GM+GGQ++D+ E I + ++ + KTGAL+ Sbjct: 121 MDYSLKNGGNSL-KAAYEIASSAGAEGMIGGQVVDVISEGKKISKDELEYMHAKKTGALI 179 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + GA++A A +++ + LR +GE LG++FQ+ DD+LD D L K Sbjct: 180 RASIVGGAVLAGACESDVKILRTYGEKLGLVFQIKDDILDVVGDADVLGK 229 >gi|253686958|ref|YP_003016148.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753536|gb|ACT11612.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 323 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S +I+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii] gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii] Length = 328 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 13/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 ++ K + + L +T +L A+RYAL G+ + + + L Sbjct: 36 YVKSKFKAVSISIQHALPPPFKRPETL---QLHEAMRYALSQGRLMCAIVCIAACELVGG 92 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A+ A+E I + + DDLPS+DN +R GKPTVH + TA+ AG LL Sbjct: 93 SQDDAMPGACAVEMIKTSTCVQDDLPSIDNAELRDGKPTVHCAFGIPTALFAGTALLVLG 152 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKM 183 FE ++ + + ++++ ++ +G G+L GQ +D+ ++ + + Sbjct: 153 FEHLA---AHYRGDTAARMVGEVSRAVGSTGLLAGQAVDMGIQNAGRAVELETLEFVHLH 209 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 KT AL+ + GAI AS + E LR +G G+++Q+ DD+ D E+L K Sbjct: 210 KTSALLEASLVIGAIAGGASDQDIEALRAYGRVTGLLYQIVDDIADATKTTEELGK 265 >gi|313884672|ref|ZP_07818428.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8] gi|312620040|gb|EFR31473.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8] Length = 300 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 123/204 (60%), Gaps = 5/204 (2%) Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLI 88 + + ++ + Y+L GGK++R +V +F N L A+E IH YSLI Sbjct: 22 LSIEAPLEMVKPMLYSLKNGGKRLRPLMVLLVIDIFEQANLKDGLSTAFALEYIHTYSLI 81 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MDN +RRG+PT H+Q+DE TAI+AG+ LLT AF +I+ + +LK R +L+ Sbjct: 82 HDDLPAMDNDDLRRGQPTNHVQFDEATAILAGDALLTDAFALIAQ-EAKLKPRQRLKLIE 140 Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L+ + G GM+ GQ+ DI+ E + + I ++KTG L +AC++GAI++ AS E Sbjct: 141 LLSRSAGSTGMVAGQLFDIRAENQTLTIEALKNIHRLKTGRLFSYACQAGAIISDASDKE 200 Query: 207 KERLRCFGENLGIIFQLADDLLDC 230 + + F + G+ +Q+ +DL D Sbjct: 201 LKLIDEFAQAFGLAYQIHNDLQDV 224 >gi|126662951|ref|ZP_01733949.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38] gi|126624609|gb|EAZ95299.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38] Length = 324 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 12/216 (5%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 D + + + + L I Y L LGGK++R L + +FNV+ A+ AI Sbjct: 9 DKIANHFSQIVANKEPKNLYEPIEYILSLGGKRMRPVLTLMASEVFNVDCEKAVPAATAI 68 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E H +SLIHDD+ MD+ +RRG TVH ++D T I++G+ +L A++ + + + Sbjct: 69 EVFHNFSLIHDDI--MDDAPLRRGNQTVHEKWDLNTGILSGDAMLILAYQFFENYEPKTF 126 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESG 196 L+ + + GQ D+ E D+ + + + KT L+ A + G Sbjct: 127 QK------LAKLFSKTALEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVGAAMKMG 180 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 AI+A S + + FG NLGI FQL DD LD Sbjct: 181 AIVAETSDENADLIYDFGLNLGIAFQLQDDYLDAFG 216 >gi|295136374|ref|YP_003587050.1| isoprenyl synthetase [Zunongwangia profunda SM-A87] gi|294984389|gb|ADF54854.1| isoprenyl synthetase [Zunongwangia profunda SM-A87] Length = 324 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L + + L + Y L LGGK++R LV +F+ ++ AL AIE Sbjct: 11 FLKYLKEKITIKEPANLYEPMVYILGLGGKRLRPVLVLMATEIFDKDYKKALDASLAIEI 70 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +L A+++ + + Sbjct: 71 FHNFSLVHDDI--MDDAPLRRGKATVHEKWDVNTGILSGDAMLINAYQLFENYEGDTFKE 128 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAI 198 L+ + GQ DI E D+ + + KT L+ + + GAI Sbjct: 129 ------LAQLFTKTAIEVCEGQQYDIDFETRDDVSIDDYLKMIEYKTAVLVGASLQMGAI 182 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +A + K+ + FG LGI FQL DD LD D PK Sbjct: 183 VAEVDEECKKAIYQFGRLLGIAFQLQDDFLDAFGD-PK 219 >gi|124003018|ref|ZP_01687869.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps) [Microscilla marina ATCC 23134] gi|123991668|gb|EAY31076.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps) [Microscilla marina ATCC 23134] Length = 323 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 75/225 (33%), Positives = 119/225 (52%), Gaps = 12/225 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 I T+ D+ A +H L IRY + LGGK++R LV SLF+ NH A+ Sbjct: 3 IKTLQTDIHTALAGLQYGEHPVELYEPIRYIMSLGGKRMRPLLVLLGYSLFDDNHQKAMN 62 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 ++E H ++L+HDD+ MD +RRGKPT+H +++ T I++G+ +L A+E++ Sbjct: 63 AALSVEVFHNFTLVHDDI--MDEAPLRRGKPTIHQKWNTNTGILSGDVMLVQAYELLLDI 120 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCF 191 + + + N + GQ LD+ E ID E + ++KT L+ + Sbjct: 121 DSAHLKRVIGKF------NRCAAEVCEGQQLDMNFEHIDAVPEADYLNMIRLKTAVLLGY 174 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + E G I+A+A++ + L FG N+G+ FQL DDLLD D K Sbjct: 175 SLELGGIVANANKVAADLLNGFGVNIGVGFQLMDDLLDVYADAAK 219 >gi|197104377|ref|YP_002129754.1| geranyltranstransferase [Phenylobacterium zucineum HLK1] gi|196477797|gb|ACG77325.1| geranyltranstransferase [Phenylobacterium zucineum HLK1] Length = 292 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 98/233 (42%), Positives = 138/233 (59%), Gaps = 6/233 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62 L ++ E + + LD+LL + RL A+RYA LG GK++R+F E Sbjct: 2 DLSRRVAEAADLVTVALDELLPRGEGP-----ESRLTEAMRYAALGPGKRLRTFFALETG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F+++ LR A+ECIH YSL+HDDLP MD+ +RRG+PTVH YDE TA++AG+ Sbjct: 57 RMFDLDDRPVLRSACALECIHAYSLVHDDLPCMDDDDVRRGRPTVHKAYDEATAVLAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L T AFEI++ P T IR++L+ L H G +GM GGQM+DI D V +Q+ Sbjct: 117 LQTAAFEILAHPDTHPDGGIRAELVARLAHASGARGMAGGQMIDILGVREDLGGVARMQR 176 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +KTGAL+ A E ++A A E+ L F +LG+ +Q+ DDLLD E D Sbjct: 177 LKTGALIACAFELPLVLARAMDGERHALMNFAHDLGLAYQIVDDLLDAEGDEA 229 >gi|15922378|ref|NP_378047.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus tokodaii str. 7] gi|15623167|dbj|BAB67156.1| 329aa long hypothetical geranylgeranyl pyrophosphate synthetase [Sulfolobus tokodaii str. 7] Length = 329 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 9/224 (4%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + I++++ + +++ + L A Y GGK++R ++ A L + A Sbjct: 7 FNRIVENVNINIEKYLKGDIQE-LYEASFYLFKAGGKRLRPLILVSSADLLGGDLNRAYL 65 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 GA++E +H ++LIHDD+ MD RRG PTVH+++ AI+AG+ L AFEI++ Sbjct: 66 AGASVEVLHTFTLIHDDI--MDEDTTRRGMPTVHVKWGIPMAILAGDLLHAKAFEILNEA 123 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191 + N ++ T I + + GQ LD+Q E + E + + K KT L Sbjct: 124 FRGMSSNKITRAFEIFTKAIII--ISEGQALDMQFEDKVTVSEEEYLDMIKRKTAMLFSS 181 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G ++A ++ E + L +G NLGI FQ+ DD+L D Sbjct: 182 SAALGGLIATDNEKEIQALADYGLNLGISFQIVDDILGLIADEK 225 >gi|254805697|ref|YP_003083918.1| geranyltranstransferase [Neisseria meningitidis alpha14] gi|254669239|emb|CBA08097.1| geranyltranstransferase [Neisseria meningitidis alpha14] gi|325145254|gb|EGC67533.1| geranyltranstransferase [Neisseria meningitidis M01-240013] Length = 298 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 77/237 (32%), Positives = 118/237 (49%), Gaps = 8/237 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L V + AAIE IH YSL+HDD+P+MDN +RRGKPT H+QYDE TA++ G Sbjct: 59 ASELGGVVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 + L T AF+++S P + +L+ L + + + + Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|54298220|ref|YP_124589.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris] gi|53752005|emb|CAH13431.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris] Length = 298 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 11/230 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + + ++R + L+ LL + ++ SA+ YAL GGK+IR LV L +V Sbjct: 6 IDKYTQRHELYLEQLLNEIIIP-----APKIRSALHYALFSGGKRIRPILVYLAGDLIDV 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + AA+E HCYSLIHDDLP+MDN +RRGKP+ H +DE TAI+ G+G+ A Sbjct: 61 DQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALA 120 Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKM 183 E +++ L + L + G+ GM+ GQ LD+ + + E Q+ I + Sbjct: 121 IEVVLTRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKLSVTEEQLREIHLL 180 Query: 184 KTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTG L+ E A S+ K L+ +G+++G++FQ+ DD LD Sbjct: 181 KTGKLILACFEMVLAAQNEVSEQIKSALKTYGKHIGLVFQMQDDYLDLYA 230 >gi|224025695|ref|ZP_03644061.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM 18228] gi|224018931|gb|EEF76929.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM 18228] Length = 327 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 21/235 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 +E KRI ++ L ++ L I Y L LGGK++R L+ +L+ + Sbjct: 7 EELMKRIHAYIEQL-------SYSREPKGLYDPIEYVLALGGKRLRPVLMLLAYNLYRED 59 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + A IE H ++L+HDDL MDN +RRGKP VH +++E TAI++G+ +L ++ Sbjct: 60 VESIFSQAAGIETYHNFTLLHDDL--MDNADMRRGKPVVHKKWNENTAILSGDAMLILSY 117 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKT 185 + + Q ++M + GQ D++ E ++ + + ++KT Sbjct: 118 QFM---MNQCPPEHVQEVMEIFGRTA--LEVCEGQQWDMEFESRNDVTVGEYIEMIRLKT 172 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 L+ A + GA++ AS + ++L FG +G+ FQL DD LD + KK Sbjct: 173 SVLLAAALKIGAVLGGASSADAQKLYDFGIRMGLAFQLQDDYLDVYGNPAVFGKK 227 >gi|329121102|ref|ZP_08249733.1| geranyltranstransferase [Dialister micraerophilus DSM 19965] gi|327471264|gb|EGF16718.1| geranyltranstransferase [Dialister micraerophilus DSM 19965] Length = 284 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 83/228 (36%), Positives = 133/228 (58%), Gaps = 10/228 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+E I+ L LL Q + L ++ Y+LL GK+IR L +F V Sbjct: 6 LKEKRNLINKHLAGLL-----KTQRPEHKILFDSMNYSLLSNGKRIRGCLFLFILEMFKV 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++L L + A++EC+H YSLIHDDLP MDN RRG T H +Y E A+ AG+ LLT+A Sbjct: 61 DYLQYLDIAASVECVHTYSLIHDDLPCMDNDDYRRGILTNHKKYGEGVALQAGDALLTFA 120 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185 F++IS K +D + +LS+ G +GM+ GQ + I+++ I+ ++ ++ K KT Sbjct: 121 FQLISQAKFSAEDRCKLIEILSIA--AGAEGMVAGQVHDIQIENKSIELDELKLLDKFKT 178 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 G ++ + + H S ++ ++LR F ++LG++FQ+ DD+LD +ED Sbjct: 179 GRMIKTPVDMAIQLTHMSISDADQLRKFAKHLGLLFQITDDILDYKED 226 >gi|193213417|ref|YP_001999370.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] gi|193086894|gb|ACF12170.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] Length = 332 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 19/239 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60 + ++ Q+ +I+ L A+ Q + L + RY L G GK+IR FL Sbjct: 7 QAQVETRYQQYHAKINEAL-------AACFPKQSPETLYAPARYILEGKGKRIRPFLTLL 59 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + + + AL V IE +H ++L+HDD+ MD +R G+PTVH Q+D AI++G Sbjct: 60 ASEAVSGSSENALGVALGIEVLHNFTLMHDDI--MDAADLRHGRPTVHKQWDVNAAILSG 117 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177 + ++ YA+E+ + + N + GQ LD++ E + Sbjct: 118 DMMIAYAYELALKAISSRHAEM------IHIFNDANITICEGQALDMELEQRKDVTIADY 171 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTG L+ A E+G + + + + L FGE +G FQ+ DD LD K Sbjct: 172 LDMISKKTGRLISAALEAGGVAGNGTPEQIAALVTFGEKIGRAFQIQDDYLDIMAGDGK 230 >gi|126173210|ref|YP_001049359.1| polyprenyl synthetase [Shewanella baltica OS155] gi|152999569|ref|YP_001365250.1| polyprenyl synthetase [Shewanella baltica OS185] gi|160874188|ref|YP_001553504.1| polyprenyl synthetase [Shewanella baltica OS195] gi|304410433|ref|ZP_07392051.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|307304525|ref|ZP_07584275.1| Polyprenyl synthetase [Shewanella baltica BA175] gi|125996415|gb|ABN60490.1| Trans-hexaprenyltranstransferase [Shewanella baltica OS155] gi|151364187|gb|ABS07187.1| Polyprenyl synthetase [Shewanella baltica OS185] gi|160859710|gb|ABX48244.1| Polyprenyl synthetase [Shewanella baltica OS195] gi|304350917|gb|EFM15317.1| Polyprenyl synthetase [Shewanella baltica OS183] gi|306911927|gb|EFN42351.1| Polyprenyl synthetase [Shewanella baltica BA175] gi|315266420|gb|ADT93273.1| Polyprenyl synthetase [Shewanella baltica OS678] Length = 331 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPLLSVLAARAVSYEGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ D+++ +L+ T N+ +G + Q+++ Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMMTEL-----DSMKVLRVLADTTNVLAEGEVL-QLMNCN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A A+ ++ L +G+ LG FQL DDLL Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAGVLAGATPEQETALGNYGKYLGTAFQLTDDLL 222 Query: 229 DCEED 233 D D Sbjct: 223 DYTAD 227 >gi|307611173|emb|CBX00817.1| hypothetical protein LPW_25211 [Legionella pneumophila 130b] Length = 298 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 11/230 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + + ++R + L+ LL + ++ SA+ YAL GGK+IR LV L +V Sbjct: 6 IDKYTQRHELYLEQLLNEIVIP-----APQIRSALHYALFSGGKRIRPILVYLAGDLIDV 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + AA+E HCYSLIHDDLP+MDN +RRGKP+ H +DE TAI+ G+G+ A Sbjct: 61 DQEVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALA 120 Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKM 183 E ++ L + L + G+ GM+ GQ LD+ + + E Q+ I + Sbjct: 121 IEVVLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLRGIHLL 180 Query: 184 KTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTG L+ E A S+ K LR +G+++G++FQ+ DD LD Sbjct: 181 KTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYA 230 >gi|283769470|ref|ZP_06342366.1| putative geranyltranstransferase [Bulleidia extructa W1219] gi|283103738|gb|EFC05124.1| putative geranyltranstransferase [Bulleidia extructa W1219] Length = 276 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 123/215 (57%), Gaps = 14/215 (6%) Query: 30 HMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 + + L A+ YAL+ GK+IR ++ F + A+E IH YSLI Sbjct: 9 SLSIYEDGVLKKAMEYALMTKGKRIRPQIIFHTLKAFGLQEELGYAYACALEYIHTYSLI 68 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP+MD+ +RRGKPTVH+ + E AI+AG+ LLT +F ++ K N+++ +L Sbjct: 69 HDDLPAMDDDVLRRGKPTVHVSFGEDLAILAGDALLTESFYQLTKNTLSDKQNLKALEVL 128 Query: 149 SLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 S + G GM+ GQ++D++ ++F + + + + KTG L+ + E GAI A N+ Sbjct: 129 S--SHAGANGMVLGQVMDMRTNQFSTQEDIETMLEKKTGRLLESSFELGAIAA----NQL 182 Query: 208 ERLRCF---GENLGIIFQLADDLLDCE---EDLPK 236 E+L F G+ +G+ FQ+ DDLL+ E E+L K Sbjct: 183 EQLMSFQEAGKWIGLAFQIQDDLLEVEKTTEELGK 217 >gi|317493609|ref|ZP_07952030.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918552|gb|EFV39890.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 323 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLSARALNYTGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ +R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTSLQS-----LRVLELMSEATNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI+A A+ ++ L+ +G LG FQL DDLL Sbjct: 155 DPNITEENYMRVIYSKTARLFEAAAQSSAILAGATHEQEIALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|318604611|emb|CBY26109.1| octaprenyl-diphosphate synthase; Dimethylallyltransferase; Geranyltranstransferase (farnesyldiphosphate synthase); Geranylgeranyl pyrophosphate synthetase [Yersinia enterocolitica subsp. palearctica Y11] Length = 306 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +L + +R++ L D + N L+ A+RY A+LGGK++R +LV Sbjct: 9 DFNQQLAAHQQRVNQALLDFIAPL-----PFGNSDLVEAMRYGAVLGGKRLRPYLVYATG 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F ++ + AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+ Sbjct: 64 QMFGLSLTSLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123 Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ P + D R ++ L H G+ GM GGQ LD+ E I + Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIAELAHASGVAGMCGGQALDLAAESRQITLDDLEK 183 Query: 180 IQKMKTGALMCFACE-SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KTGAL+ A + L + +G+ FQ+ DD+LD D + Sbjct: 184 IHRHKTGALIRAAVRLGALAAGALGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIG 243 Query: 236 KK 237 K+ Sbjct: 244 KR 245 >gi|311109204|ref|YP_003982057.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans A8] gi|310763893|gb|ADP19342.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans A8] Length = 308 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 15/222 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 K +D ++ + L ++T + + + GGK++R +V A Sbjct: 2 KAVDAVIRERLNSEVVLIRTIGDYIIGA-------GGKRMRPAMVLMVARALGYEGTHHQ 54 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +FE++ Sbjct: 55 LLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEMMVE 112 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + +R +LS + +G + Q+L++ D + + + + + KT L A Sbjct: 113 ANS-----MRVMSILSEATTVIAEGEVL-QLLNVHDPDVSQERYLQVVRYKTAKLFEAAA 166 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GA++A A+ ++ +G ++G FQL DD+LD D Sbjct: 167 QVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAA 208 >gi|307637619|gb|ADN80069.1| Octa prenyl-diphosphate synthase/Dimethyl allyl transferase/Geranyl trans transferase /farnesyl diphosphate synthase/Geranyl geranyl pyrophosphate synthetase [Helicobacter pylori 908] gi|325996213|gb|ADZ51618.1| Octaprenyl-diphosphate synthase/Dimethylallyltransferase/Geranyltranstransferas e/farnesyldiphosphate synthase/Geranylgeranyl pyrophosphate synthetase [Helicobacter pylori 2018] gi|325997807|gb|ADZ50015.1| Geranyltranstransferase [Helicobacter pylori 2017] Length = 303 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV-----NHLT 71 + L H++ H + L GGK+ R L +L Sbjct: 14 ERFESFLKNHRLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ + L+ I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SN--SLLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + + + L+ FG +G+ FQ+ DD++D +D Sbjct: 192 SASLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEK 238 >gi|212709179|ref|ZP_03317307.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM 30120] gi|212688091|gb|EEB47619.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM 30120] Length = 305 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 84/245 (34%), Positives = 127/245 (51%), Gaps = 9/245 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M P ++ ++ LL + + L A++Y LLGGK++R FL Sbjct: 1 MPEQHPDTFARQQRQAHDRVNQYLLTSLDSLPFADLP-LAQAMKYGTLLGGKRLRPFLTY 59 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + V+ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E A++A Sbjct: 60 AVGEMLGVSLDNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAVLA 119 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176 G+ L T+AF+++SS + D R ++ L + GL GM GGQ LD + + +D Sbjct: 120 GDALQTFAFQLLSSASMPDVSDKDRIAMIAELAYASGLAGMCGGQALDLDAEGKRVDLVS 179 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED-- 233 + I + KTGAL+ A GA A L + E++G+ FQ+ DD+LD D Sbjct: 180 LERIHQHKTGALIRAAIRLGAYAAGHKGYQALTNLDKYAESIGLAFQVQDDILDVIGDSA 239 Query: 234 -LPKK 237 K+ Sbjct: 240 VTGKR 244 >gi|172056944|ref|YP_001813404.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15] gi|171989465|gb|ACB60387.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15] Length = 289 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 89/232 (38%), Positives = 135/232 (58%), Gaps = 12/232 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L E +++ L+ + + + DRL A+ Y+L GGK++R L+ + V Sbjct: 4 LTEWKTQVEQALETFMNRLEA------PDRLREAMLYSLDAGGKRVRPALIYAVLDAYGV 57 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + T AA+E IH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+AG+ LLT A Sbjct: 58 DRKTGDATAAALEMIHTYSLIHDDLPAMDDDDMRRGRPTNHIEFDEATAILAGDALLTNA 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMK 184 F + +T ++ +L+ L G GM+GGQ+ D+ E D ++ I + K Sbjct: 118 FTCL--LETMAAAEVKVKLLERLAAAAGAAGMVGGQLDDMLGERGGISDAEELESIHRRK 175 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 TGAL+ FA E+G I+A + + E+L+ +G +LGI FQ+ DD+LD D K Sbjct: 176 TGALLIFAVEAGGILAGVADEDLEQLKRYGRHLGIAFQIQDDILDVTGDADK 227 >gi|218128733|ref|ZP_03457537.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697] gi|217989188|gb|EEC55503.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697] Length = 324 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 12/222 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +L+ + A + L + Y L +GGK+IR L+ +L+ + + Sbjct: 6 ELLEKINSHIADLQFVRTPKGLYDPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE H Y+L+HDDL MD RRGK TVH +++ AI++G+ +L A++ ++ Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADKRRGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPV 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 + L+ + GQ +D++ E + E + + ++KT L+ + Sbjct: 124 GHLKEVMDLFSLT------ALEICEGQQMDMEFERRNDVKEEEYLEMIRLKTSVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GA++ AS + ERL FG N+G+ FQL DDLLD D Sbjct: 178 KIGALLGGASAEDAERLYDFGVNMGVAFQLKDDLLDVYGDAA 219 >gi|157369322|ref|YP_001477311.1| geranyltranstransferase [Serratia proteamaculans 568] gi|157321086|gb|ABV40183.1| Polyprenyl synthetase [Serratia proteamaculans 568] Length = 306 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 84/238 (35%), Positives = 127/238 (53%), Gaps = 10/238 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +LQ +R D L + + ++ +++A+R+ ALLGGK++R FLV Sbjct: 9 AFSDQLQALRQRADRTLLNFIAPL-----PFNDGNMVAAMRHGALLGGKRLRPFLVYTTG 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +F V+ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+ Sbjct: 64 QMFGVSLNNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 123 Query: 123 LLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF I++ + R ++ L G+ GM GGQ LD++ E I + Sbjct: 124 LQTLAFSILADAEMPDVALCDRLAMVSELATASGVAGMCGGQSLDLEAEDRQIGLEALEQ 183 Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 I + KTGAL+ A GA+ A +L + +G+ FQ+ DD+LD + K Sbjct: 184 IHRHKTGALIRAAVRLGALAAGEPGRAALVQLDRYAAAIGLAFQVQDDILDVVGETEK 241 >gi|21673095|ref|NP_661160.1| isoprenyl synthetase [Chlorobium tepidum TLS] gi|21646167|gb|AAM71502.1| isoprenyl synthetase [Chlorobium tepidum TLS] Length = 332 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 19/239 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60 + SK ++ +I+ L A+ + L RY L G GK+IR FL Sbjct: 7 QAQVESKYRQYHAKINEAL-------AACFPKEKPATLYDPARYILEGKGKRIRPFLTLL 59 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + AL V IE +H ++L+HDD+ MD +R G+PTVH Q++ AI++G Sbjct: 60 AAEAVSGKSDNALGVALGIEVLHNFTLMHDDI--MDQADLRHGRPTVHKQWNVNAAILSG 117 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177 + ++ YA+E+ + I N + GQ LD++ E + Sbjct: 118 DMMIAYAYELALKAISSRHAEI------IHIFNDANITICEGQALDMELEQRKDVTIADY 171 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTG L+ A E+G + + + L FGE +G FQ+ DD LD K Sbjct: 172 LDMISKKTGRLISAALEAGGVAGDGTPEQIAALVTFGEKIGRAFQIQDDYLDIMAGDGK 230 >gi|221640208|ref|YP_002526470.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131] gi|221160989|gb|ACM01969.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131] Length = 331 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 14/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + L E+ ++ ++ + + + + L+ A GGK++R L A L Sbjct: 12 LAAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 65 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D + RRGKPT ++ +D ++++ G+ L Sbjct: 66 CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 123 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 +F+++ + +R +L+ +G + Q+ QD E + + K Sbjct: 124 ARSFQLMVETGS-----LRVMDILANASATISEGEVL-QLTAAQDLRTTEDIYLQVVRGK 177 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T AL A + G ++A + + E L +G+ LGI FQ+ DDLLD Sbjct: 178 TAALFAAATQVGGVVAGMPEAQVEALHAYGDALGIAFQIVDDLLDYGG 225 >gi|42519419|ref|NP_965349.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533] gi|41583707|gb|AAS09315.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533] Length = 288 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 117/233 (50%), Gaps = 17/233 (7%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 KL++ ++ +D+ L + H+ T+ N + Y+++ GGK++R L Sbjct: 2 KLKDFQEKYTPQIDNFLKE---HLVTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLETL 58 Query: 66 NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+GLL Sbjct: 59 NHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLL 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFM 179 + I+ I + +G GM+GGQ LDI D + + Sbjct: 119 PLGIQWITEGSNSAALAIVI------SQAVGPNGMVGGQYLDIDTTNNDSAKENAKMIDQ 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ +KTG L+ + + AI A A+ +E RL F + G +Q+ DDL+D E Sbjct: 173 MEWLKTGCLIEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVE 225 >gi|313623887|gb|EFR94002.1| geranyltranstransferase [Listeria innocua FSL J1-023] Length = 293 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 85/222 (38%), Positives = 129/222 (58%), Gaps = 6/222 (2%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD+ L + + + +L ++ Y++ GGK+IR LV N+ + L+ Sbjct: 13 KVLDESLFKEINMRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNIEPMRGLKTA 70 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E IH YSLIHDDLP+MD+ RRGK T H Y + TAI+AG+ LLT AF I++ + Sbjct: 71 TALEMIHTYSLIHDDLPAMDDDDYRRGKWTNHKIYGDATAILAGDALLTLAFSILAEDEN 130 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 L R L+ ++++ G +GM+GGQ D++ E + ++ I KTG L+ FA Sbjct: 131 -LSFETRIALINQISYSSGAEGMVGGQQADMEAENKQVTLEELASIHARKTGELLIFAVT 189 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A A+ + +RLR F EN+GI FQ++DD+LD D K Sbjct: 190 SAAKIAEATPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|157736691|ref|YP_001489374.1| geranyltranstransferase [Arcobacter butzleri RM4018] gi|157698545|gb|ABV66705.1| geranyltranstransferase [Arcobacter butzleri RM4018] Length = 286 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 81/226 (35%), Positives = 124/226 (54%), Gaps = 14/226 (6%) Query: 20 LDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRV 75 +D LL+ +T H D L ++ GGK+ R L+ A+ V Sbjct: 8 FEDYLLKNLPISKTFHPHFEDALADMLK---AGGKRFRPMLLLSVVKSNKSLLVPNAMSV 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 +E +H YSLIHDDLP+MDN +RRG T+H +YDEVTAI+ G+ L T AF +I++ Sbjct: 65 ALGVEFLHTYSLIHDDLPAMDNSDLRRGFQTLHKKYDEVTAILVGDALNTEAFNLIANA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFAC 193 L ++I+ +L+ L HN G+ GM+ GQ +D E I Q+ + KT L+ + Sbjct: 124 -SLHNDIKVELIKCLAHNGGINGMIIGQAIDCHFEKQKIQLNQLEFLHIHKTARLIAASL 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 + GAI++ +E+L FG +LG++FQ+ DD++D EE+ K Sbjct: 183 KMGAIISEYDLQTQEKLYNFGIDLGLLFQIQDDIIDETCTEEEAGK 228 >gi|268319202|ref|YP_003292858.1| geranyltranstransferase [Lactobacillus johnsonii FI9785] gi|262397577|emb|CAX66591.1| geranyltranstransferase [Lactobacillus johnsonii FI9785] Length = 288 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 117/233 (50%), Gaps = 17/233 (7%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 KL++ ++ +D+ L + H+ T+ N + Y+++ GGK++R L Sbjct: 2 KLKDFQEKYTPQIDNFLKE---HLVTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLETL 58 Query: 66 NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+GLL Sbjct: 59 NHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLL 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFM 179 + I+ I + +G GM+GGQ LDI D + + Sbjct: 119 PLGIQWITEGSNSAALAIVI------SQAVGPNGMVGGQYLDIDTTNNDSAKENAKMIDQ 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ +KTG L+ + + AI A A+ +E RL F + G +Q+ DDL+D E Sbjct: 173 MEWLKTGCLIEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVE 225 >gi|121610223|ref|YP_998030.1| polyprenyl synthetase [Verminephrobacter eiseniae EF01-2] gi|121554863|gb|ABM59012.1| farnesyl-diphosphate synthase [Verminephrobacter eiseniae EF01-2] Length = 314 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 18/243 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L Q + +++ L + A L A+RYA+L GGK++R LV Sbjct: 15 DLGGWQQNHLAQVEQALSQWVGHGA-------PAGLGEAMRYAVLDGGKRLRPLLVLAAY 67 Query: 63 SLF--NVNHLTALR------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 A A+E IH YSL+HDDLP MDN +RRGKPT H+++ Sbjct: 68 QAVCSGQPAPCAWHDAAALRAACAVELIHAYSLVHDDLPCMDNDVLRRGKPTAHVRFGPA 127 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172 A++AG+ L +AFE+++ + ++ L L G GM GGQ +D+ + Sbjct: 128 RALLAGDALQAFAFELLTPEDMPIPAATQAALCRLLARAAGSTGMAGGQAIDLASVGLRL 187 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 E Q+ + ++KTGAL+ + GA+ A+ L +G LG+ FQ+ DD+LD Sbjct: 188 TEGQLRQMHRLKTGALLQASVLMGAVCGQAAPAAYRALSDYGAALGLAFQVVDDILDVVA 247 Query: 233 DLP 235 D Sbjct: 248 DSA 250 >gi|148359869|ref|YP_001251076.1| geranyltranstransferase [Legionella pneumophila str. Corby] gi|296107919|ref|YP_003619620.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy] gi|148281642|gb|ABQ55730.1| geranyltranstransferase [Legionella pneumophila str. Corby] gi|295649821|gb|ADG25668.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy] Length = 298 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 80/230 (34%), Positives = 123/230 (53%), Gaps = 11/230 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + + ++R + L+ LL + ++ SA+ YAL GGK+IR LV L +V Sbjct: 6 IDKYTQRHELYLEQLLNEIIIP-----APKIRSALHYALFSGGKRIRPILVYLAGDLIDV 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + AA+E HCYSLIHDDLP+MDN +RRGKP+ H +DE TAI+ G+G+ A Sbjct: 61 DQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALA 120 Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKM 183 E +++ L + L + G+ GM+ GQ LD+ + + E Q+ I + Sbjct: 121 IEVVLTRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKLSVTEEQLREIHLL 180 Query: 184 KTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTG L+ E A S+ K LR +G+++G++FQ+ DD LD Sbjct: 181 KTGKLILACFEMVLAAQNEISEQIKSALRTYGKHIGLVFQMQDDYLDLYA 230 >gi|91205532|ref|YP_537887.1| octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C] gi|91069076|gb|ABE04798.1| Octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C] Length = 334 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 63/220 (28%), Positives = 120/220 (54%), Gaps = 11/220 (5%) Query: 15 RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70 +I L D + Q + + + + ++ L+ + +Y L GGK+IR L A +F+ N Sbjct: 13 KIQQDLKDEVAQLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYNGD 72 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + +F++ Sbjct: 73 SHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 130 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 + + + I++ +L+ I +G + + + I+ + I K KT L Sbjct: 131 MVASGS-----IKAMNVLAKASAIISEGEVVQLVKLNERRLINIEEYQQIVKSKTAELFG 185 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 +C GAI+A+ S + + + FG+ LG IFQ+ DDLLD Sbjct: 186 ASCSVGAIIANQSDDISKNMEEFGKLLGTIFQVIDDLLDY 225 >gi|15611931|ref|NP_223582.1| geranyltranstransferase [Helicobacter pylori J99] gi|4155442|gb|AAD06447.1| GERANYLTRANSTRANSFERASE [Helicobacter pylori J99] Length = 303 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV-----NHLT 71 + L H++ H + L GGK+ R L SL Sbjct: 14 ERFESFLKNHYLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ + L+ I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SN--SLLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + + + L+ FG +G+ FQ+ DD++D +D Sbjct: 192 SASLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEK 238 >gi|154147947|ref|YP_001405809.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP synthase) [Campylobacter hominis ATCC BAA-381] gi|153803956|gb|ABS50963.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Campylobacter hominis ATCC BAA-381] Length = 284 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 77/217 (35%), Positives = 116/217 (53%), Gaps = 7/217 (3%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS-LFNVNHLTALRVGA 77 ++ L + + H A+ Y L GGK R+ L + A+ + Sbjct: 10 FENYLRENPIKAPSFHP-YFEEALNYMLFAGGKHFRAQLCLGVVETMAPKKLSKAMPIAL 68 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 AIE IH YSLIHDDLPS+DN RRG T+H +YDEV+AI+ G+ L T AF IS Sbjct: 69 AIEMIHTYSLIHDDLPSVDNADFRRGIATIHKKYDEVSAILVGDALNTEAFYRISRA--D 126 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195 L DNI+ + + L+ N G GM+ GQ +D E ++ +QV + ++KTGAL+ + Sbjct: 127 LNDNIKIKCVEILSKNAGSAGMVLGQAIDCFFEKKQLEISQVEFLHRLKTGALIGASLAL 186 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 GA ++ + + +++ G LG+ FQ+ DDL+D Sbjct: 187 GATISEIPKEKTDKIYEIGLKLGLAFQINDDLIDATS 223 >gi|113869207|ref|YP_727696.1| trans-hexaprenyltranstransferase [Ralstonia eutropha H16] gi|113527983|emb|CAJ94328.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha H16] Length = 328 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 15/229 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L + + + + +D ++ L ++ Q + ++ A GGK++R ++ A Sbjct: 11 ALLAPVAADMRAVDAVIRQRLSSEVPLIE-QIGEYIIGA------GGKRLRPVILLLTAR 63 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 64 AMGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTANAVFGNAASVLVGDFL 121 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + AF+++ + +R +LS N+ +G + Q+L++ D + + + + Sbjct: 122 YSRAFQMMVDAGS-----MRIMEILSNATNVIAEGEVL-QLLNMHDPDVTVERYLQVIRY 175 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L A + GA++A A +E +G +G FQL DD+LD Sbjct: 176 KTAKLFEAAAQLGAVLAGADAQMEEAAAEYGRRIGTAFQLIDDMLDYTA 224 >gi|317475481|ref|ZP_07934744.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA] gi|316908312|gb|EFV30003.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 324 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 12/222 (5%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +L+ + A + L + Y L +GGK+IR L+ +L+ + + Sbjct: 6 ELLEKINSHIADLQFIRTPKGLYDPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE H Y+L+HDDL MD RRGK TVH +++ AI++G+ +L A++ ++ Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADKRRGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPV 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193 + L+ + GQ +D++ E + E + + ++KT L+ + Sbjct: 124 GHLKEVMDLFSLT------ALEICEGQQMDMEFERRNDVKEEEYLEMIRLKTSVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + GA++ AS + ERL FG N+G+ FQL DDLLD D Sbjct: 178 KIGALLGGASAEDAERLYDFGVNMGVAFQLKDDLLDVYGDAA 219 >gi|227113758|ref|ZP_03827414.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 323 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S +I+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|134300012|ref|YP_001113508.1| trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1] gi|134052712|gb|ABO50683.1| Trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1] Length = 320 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 24/239 (10%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 S+++++ + ++ + ++Q+ + TQ + LL+A GGK++R Sbjct: 3 DFFSQVRKDLQVVEHEIKT-IVQSRDPLLTQTSIHLLNA------GGKRLRPAFALLAGK 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 ++ + L + A+E IH +L+HDD+ +D+ RRG PTV + ++ G+ L Sbjct: 56 FYHYSLEKLLPLAVALELIHMATLVHDDV--VDDSLTRRGTPTVKANWGNRISMHTGDYL 113 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMI 180 + +IS + L + + M G+M I + E F Sbjct: 114 FAKSLVLISQYENPLIAQVLADT---------SVMMCEGEMHQISTAYSAEQSWRDYFYR 164 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 K KT L+ +C+ GA+ A + E + LR +G +LG+ FQ+ DD+LD D L K Sbjct: 165 IKRKTALLIAASCQLGAVAVGAPEEEYKNLRRYGHHLGMAFQITDDILDMVADQSLLGK 223 >gi|33595027|ref|NP_882670.1| octaprenyl-diphosphate synthase [Bordetella parapertussis 12822] gi|33565103|emb|CAE40054.1| octaprenyl-diphosphate synthase [Bordetella parapertussis] Length = 321 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 113/234 (48%), Gaps = 16/234 (6%) Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59 MN L + + ++ K +D ++ D L ++T + + + GGK++R +V Sbjct: 1 MNLPELIAPIADDMKAVDAVIRDRLNSDVVLIRTIGDYIIGA-------GGKRMRPAMVL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A +E IH +L+HDD+ +D +RRG+ T + + +++ Sbjct: 54 MVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLV 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + +FE++ D++R +LS + +G + Q+L++ D + + + Sbjct: 112 GDYLYSRSFEMMVEA-----DSMRIMQILSQATTVIAEGEVL-QLLNVHDPDVSQERYLQ 165 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KT L A + GA++A AS ++ +G +G FQL DD+LD D Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGASPEQETAAAAYGRRVGTAFQLVDDVLDYSGD 219 >gi|218550470|ref|YP_002384261.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469] gi|218358011|emb|CAQ90657.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469] gi|324115209|gb|EGC09173.1| polyprenyl synthetase [Escherichia fergusonii B253] gi|325498768|gb|EGC96627.1| octaprenyl diphosphate synthase [Escherichia fergusonii ECD227] Length = 323 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 QGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPNITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEQGLQDYGRYLGTAFQLIDDLLDYSAD 219 >gi|87122767|ref|ZP_01078640.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121] gi|86161932|gb|EAQ63224.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121] Length = 327 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 24/226 (10%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNH-----LTAL 73 D +L Q S + L+ I Y ++ GGK++R LV A + Sbjct: 19 DHILSQLKSEIP------LIEQIGYYIISNGGKRLRPLLVLMAARACGNADASNYQDNMV 72 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 ++ IE IH +L+HDD+ +D +RRGK T + ++ +++ G+ L + AF+I+ Sbjct: 73 KMATIIEFIHTATLLHDDV--VDESDMRRGKKTANEEWGNAPSVLVGDFLYSRAFQIMVE 130 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 + ++ +L+ T NI +G + Q+++ D E + + KT L A Sbjct: 131 VGS-----MQCMQILAETTNIISEGEV-QQLINCGDPSTSEESYLKVIQYKTAKLFEGAA 184 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 GAI+A+A++ +++ L +G +G FQL DD++D E++ K Sbjct: 185 LCGAIVANANKEQQQALADYGTYVGTAFQLIDDVMDYTSTAEEMGK 230 >gi|109947621|ref|YP_664849.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba] gi|109714842|emb|CAJ99850.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba] Length = 303 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV-----NHLT 71 + L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLKNHRLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYLNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +Y+E +A++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYNETSAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SNA--SLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLV 191 Query: 190 CFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 192 SASLIMGLVASGNKDEELSKWLQDFGLKIGLCFQVLDDIIDVTQDEK 238 >gi|258647197|ref|ZP_05734666.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC 51259] gi|260853026|gb|EEX72895.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC 51259] Length = 321 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 12/221 (5%) Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRV 75 + L + + L I YAL GG K++R L SL++ + A+ Sbjct: 2 ENFLAQIENALSQQAYPTRPAGLYEPIAYALSGGGKRVRPHLTLLACSLYSDDPEKAIPA 61 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 ++E H ++L+HDDL MD +RRG+PTV ++D TAI++G+ +L AF + Sbjct: 62 ALSVETYHNHTLLHDDL--MDGADLRRGRPTVFRKWDANTAILSGDTMLILAFNHLLEGG 119 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFA 192 + L + + + GQ D+ E + E + + ++KT L+ A Sbjct: 120 YPNAAELLQLLART------AREVCEGQQYDMNFEQRNDVTEAEYIEMIRLKTSVLLACA 173 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + GA++A A ++ + L FGE +G+ FQL DD LDC D Sbjct: 174 LKMGALVAGAPADQADLLYHFGEQIGLAFQLQDDYLDCYGD 214 >gi|329118147|ref|ZP_08246859.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200] gi|327465807|gb|EGF12080.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200] Length = 297 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 80/227 (35%), Positives = 123/227 (54%), Gaps = 10/227 (4%) Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLT 71 + +T+L++L+ + L A+RYA+LGG K++R LV + L + Sbjct: 14 QAQTETLLENLMPS-----ENHAPQELHRAMRYAVLGGGKRLRPLLVLAASELGQADPDA 68 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 AA+E IH YSL+HDD+P+MDN +RRGKPT HI Y E A++AG+ L T AF+II Sbjct: 69 TAHAMAAVELIHAYSLVHDDMPAMDNDSLRRGKPTCHIAYGEAAALLAGDALQTLAFDII 128 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189 + P L R Q+ +L G GM GGQ +D+ + + + ++++ + ++KTGAL+ Sbjct: 129 TRPAA-LPAERRLQMAATLARASGSLGMAGGQAIDLANVGKTLTQSELEHMHRLKTGALI 187 Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A G + L + LG+ FQ+ DD+LDC D Sbjct: 188 RAAVRLGGLACPDLDDTALHSLDSYAAALGLAFQVIDDVLDCAADTA 234 >gi|254455595|ref|ZP_05069024.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211] gi|207082597|gb|EDZ60023.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211] Length = 290 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 85/221 (38%), Positives = 135/221 (61%), Gaps = 3/221 (1%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73 +++ I D + + Q N +L+ A++Y L GGKKIRS ++ + S+ ++++ T + Sbjct: 4 KLNKIAKDTNIFLKDFINKQKNSKLILAMKYGLFPGGKKIRSKILIDIGSMMSIDYKTLI 63 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 +GAA+ECIH Y+LIHDDLP MD+ IRRGKP+ HI++ E TAI+AGN L T A EI++S Sbjct: 64 AIGAAVECIHAYTLIHDDLPCMDDDKIRRGKPSTHIKFGESTAILAGNSLQTMACEILTS 123 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCF 191 K ++ D I+ +L+ L+ G G+ GGQ LD + + + ++ ++ KTG L F Sbjct: 124 SKLKIGDKIKIELIKKLSECSGHLGVAGGQYLDLSYEKRKVSKKKIIEMEIKKTGKLFSF 183 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 C + AI+ E + G +G++FQ+ADDL+D Sbjct: 184 CCVAPAIIKKKDNQEIKFFEDLGSKIGLLFQIADDLIDFHG 224 >gi|297584556|ref|YP_003700336.1| polyprenyl synthetase [Bacillus selenitireducens MLS10] gi|297143013|gb|ADH99770.1| Polyprenyl synthetase [Bacillus selenitireducens MLS10] Length = 297 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 85/235 (36%), Positives = 133/235 (56%), Gaps = 8/235 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN P Q +++I+ IL+ + +++ D L ++ Y+L GGK+IR L+ Sbjct: 1 MNSK-PEFQQFLTEQIN-ILEARFPLLLNPLKS--PDILKESMLYSLNAGGKRIRPVLLL 56 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 R AA+E IH YSLIHDDLP+MD+ +RRGKPT H Y E AI+A Sbjct: 57 SVLHAAGKPLEAGYRTAAALELIHTYSLIHDDLPAMDDDDLRRGKPTNHKVYGEDIAILA 116 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177 G+GLLT++F +IS + L +++ L+ +T G +GM+GGQ+ D+Q E + ++ Sbjct: 117 GDGLLTHSFNLISKDE-HLSADLKVALIADITDAAGPEGMVGGQVSDMQGEGKELTAEEL 175 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KTG L+ + +G +A ++ + + L G++LG+ FQ+ DDLLD E Sbjct: 176 EAIHHRKTGDLLSVSLMAGGKIAGLNEEDNKYLSLLGKHLGLAFQIKDDLLDIEG 230 >gi|300718598|ref|YP_003743401.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661] gi|299064434|emb|CAX61554.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661] Length = 323 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N L++ + Y ++ GGK+IR + A N Sbjct: 2 NLEQINELTAQDMADVNATILEQLNSEVSLINQLGYYIISGGGKRIRPMIAVLAARAVNY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 TGKQHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + +R ++S N+ +G + Q+++ D I E + KT Sbjct: 120 FQMMTSLGS-----LRVLALMSEAVNVIAEGEVL-QLMNCNDPDITEESYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A +S AI+A A +++ L+ +G +G FQL DDLLD D Sbjct: 174 LFEAAAQSSAILAEAVPEQEKALQDYGRFIGTAFQLIDDLLDYSAD 219 >gi|329667056|gb|AEB93004.1| geranyltranstransferase [Lactobacillus johnsonii DPC 6026] Length = 288 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 116/233 (49%), Gaps = 17/233 (7%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 KL++ ++ +D+ L + H+ T+ N + Y+++ GGK++R L Sbjct: 2 KLKDFQEKYTPQIDNFLKE---HLVTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLETL 58 Query: 66 NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+GLL Sbjct: 59 NHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLL 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFM 179 + I+ I + +G GM+GGQ LDI D + + Sbjct: 119 PLGIQWITEGSNSAALAIVI------SQAVGPNGMVGGQYLDIDTTNNDSAKENAKMIDQ 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ +KTG L+ + AI A A+ +E RL F + G +Q+ DDL+D E Sbjct: 173 MEWLKTGCLIEASVRMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVE 225 >gi|271499581|ref|YP_003332606.1| polyprenyl synthetase [Dickeya dadantii Ech586] gi|270343136|gb|ACZ75901.1| Polyprenyl synthetase [Dickeya dadantii Ech586] Length = 303 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 87/240 (36%), Positives = 128/240 (53%), Gaps = 11/240 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M L +L + +RID L+ + + L+ A+ + ALLGGK++R FLV Sbjct: 1 MTDFLK-QLAAHHQRIDAALNHFISTL-----PFQSSPLVEAMAHGALLGGKRLRPFLVY 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 LF V+ + AA+ECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+A Sbjct: 55 TTGQLFAVSPDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILA 114 Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I++ P + D R ++ L G+ GM GGQ LD+ E +D Sbjct: 115 GDALQTLAFSILADAPMPHVSDRDRLAMISELASASGVAGMCGGQALDLAAEGHQVDLQT 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ + GA+ A L + +G+ FQ+ DD+LD D Sbjct: 175 LERIHRHKTGALIRASVRLGALAAGERGRLALPYLDRYANAVGLAFQVQDDILDVIGDSA 234 >gi|256422682|ref|YP_003123335.1| polyprenyl synthetase [Chitinophaga pinensis DSM 2588] gi|256037590|gb|ACU61134.1| Polyprenyl synthetase [Chitinophaga pinensis DSM 2588] Length = 323 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 110/227 (48%), Gaps = 18/227 (7%) Query: 20 LDDLLLQTASHMQTQH----NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 DL +Q H +H +L A + L +GGK+IR L LF+ H A Sbjct: 4 FKDLTIQFGEHFSKEHFPKEPKKLYDAASHILNIGGKRIRPILSIMGNELFDDIHPDAFH 63 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 VG A+E H ++L+HDD+ MD +RR +PTVH Y + AI+AG+ +L +E ++ Sbjct: 64 VGTAVELFHNFTLVHDDI--MDKAPLRRNQPTVHTLYGDTAAILAGDVMLIKVYEYLNKV 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALM 189 + K L N + GQ +D+ E ++ QV + +KT L+ Sbjct: 122 QPHYKQK------LITAFNKAAIEVCEGQQIDMDFEDMEPEQVKYDDYVKMIALKTSVLL 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + GAI+ S ++ + FG+N+GI FQ+ DD LD D K Sbjct: 176 AASLQMGAIIGGGSDYNQQHIYEFGKNIGIAFQIQDDYLDAFGDPEK 222 >gi|254284097|ref|ZP_04959065.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B] gi|219680300|gb|EED36649.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B] Length = 321 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 17/234 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M + + +Q +++D ++ + L ++ Y + GGK++R LV Sbjct: 1 MIEAIRACVQSEVEQVDQLIIEQLHSDVDMVENVGQ--------YIVDAGGKRLRPLLVL 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + +R A +E IH +L+HDD+ +D +RRG+PT + + +++ Sbjct: 53 LAGEALGGCTESHIRFSAVVEFIHTATLLHDDV--VDVSTLRRGRPTANEAFGNAPSVLV 110 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L T AF+++ DN+ ++ T N +G + Q+ + IDE+Q Sbjct: 111 GDFLYTRAFQLMVQL-----DNMDLLRHMADTTNTIAEGEVL-QLARAGNPDIDESQYID 164 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT L AC+ A++A+ ++ L +G NLGI FQ+ DD+LD E D Sbjct: 165 VITRKTAILFASACQGAAMLANCDIKTQQALSQYGLNLGIAFQMIDDVLDYEGD 218 >gi|213582666|ref|ZP_03364492.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 319 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 27 SDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 87 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + I+A + +++ L+ Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQD 198 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219 >gi|312884946|ref|ZP_07744636.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367423|gb|EFP94985.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122] Length = 294 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 92/245 (37%), Positives = 127/245 (51%), Gaps = 19/245 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR-LLSAIRYALLG-GKKIRSFLV 58 MN S Q NS ++ L+ L H D L+ A++Y+LL GK++R FLV Sbjct: 1 MNEVFTSLKQRNSLELEKWLETL----------GHPDLSLVQAMKYSLLSEGKRVRPFLV 50 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 + AAIECIH YSLIHDDLP+MD+ +RRG PT H+Q+DE TAI+ Sbjct: 51 YATGQILGSAVEDLDTAAAAIECIHTYSLIHDDLPAMDDDDLRRGHPTCHMQFDEATAIL 110 Query: 119 AGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175 AG+ L T AF I+S K K R +++ L + G +GM GQ LD+ E + Sbjct: 111 AGDALQTLAFTILSEGKLSPKAEKNRIKMVQVLANASGARGMCLGQALDLNAEGKSVSLN 170 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED- 233 Q+ I KTG L+ A + GA+ + L + E +G+ FQ+ DD+LD D Sbjct: 171 QLEAIHVNKTGELIKAAVKLGALSCGSLDDVTATHLDRYAEAIGLAFQVQDDILDLVSDT 230 Query: 234 --LPK 236 L K Sbjct: 231 DTLGK 235 >gi|288560181|ref|YP_003423667.1| bifunctional short chain isoprenyl diphosphate synthase IdsA [Methanobrevibacter ruminantium M1] gi|288542891|gb|ADC46775.1| bifunctional short chain isoprenyl diphosphate synthase IdsA [Methanobrevibacter ruminantium M1] Length = 331 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 76/222 (34%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++ ++ L A Y GGK +R L N AL+ AAIE Sbjct: 14 DVIKTIEENLAPVQPQNLQDACIYLTKAGGKMLRPALTLISCEAVGGNKEDALKTAAAIE 73 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH +SLIH MD+ +RRG P+VH +DE AI+AG+ L + AFE+I S K + Sbjct: 74 LIHTFSLIH--DDIMDDDDMRRGMPSVHKVWDEPLAILAGDTLFSKAFEMIISSKEENAH 131 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGA 197 L+ T + GQ D+ E + E + + KTGAL+ A ++GA Sbjct: 132 PEHVANALA-TVADACVKICEGQASDMSFEGDFDVKEAEYSEMIYKKTGALIAAATKAGA 190 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 IM A + E L +G +GI FQ+ DD LD E+DL K Sbjct: 191 IMGGADEKEVTALYEYGRMIGIAFQIQDDYLDVISDEKDLGK 232 >gi|261391792|emb|CAX49247.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP synthase) [Neisseria meningitidis 8013] gi|325139150|gb|EGC61696.1| geranyltranstransferase [Neisseria meningitidis ES14902] Length = 298 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 78/237 (32%), Positives = 118/237 (49%), Gaps = 8/237 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HIQYDE TA++ G Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIQYDEATALLVG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 + L T AF+++S P + +L+ L + + + + Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235 >gi|315635861|ref|ZP_07891123.1| geranyltranstransferase [Arcobacter butzleri JV22] gi|315479840|gb|EFU70511.1| geranyltranstransferase [Arcobacter butzleri JV22] Length = 286 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 81/226 (35%), Positives = 124/226 (54%), Gaps = 14/226 (6%) Query: 20 LDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRV 75 +D LL+ +T H D L ++ GGK+ R L+ A+ V Sbjct: 8 FEDYLLKNLPISKTFHPHFEDALADMLK---AGGKRFRPMLLLSVVKSNKSLLVSNAMSV 64 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 +E +H YSLIHDDLP+MDN +RRG T+H +YDEVTAI+ G+ L T AF +I++ Sbjct: 65 ALGVEFLHTYSLIHDDLPAMDNSDLRRGFQTLHKKYDEVTAILVGDALNTEAFNLIANA- 123 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFAC 193 L ++I+ +L+ L HN G+ GM+ GQ +D E I Q+ + KT L+ + Sbjct: 124 -SLHNDIKVELIKCLAHNGGINGMIIGQAIDCHFEKQKIQLNQLEFLHIHKTARLIAASL 182 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 + GAI++ +E+L FG +LG++FQ+ DD++D EE+ K Sbjct: 183 KMGAIISEYDLQTQEKLYNFGIDLGLLFQIQDDIIDETCTEEEAGK 228 >gi|56477995|ref|YP_159584.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1] gi|56314038|emb|CAI08683.1| Polyprenyl synthetase (EC 2.5.1.-), gene: ISPB OR NE1915 [Aromatoleum aromaticum EbN1] Length = 322 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 15/234 (6%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61 L + + + + +D ++ + L ++ + S GGK++R LV Sbjct: 3 TQQLYAPIATDMQAVDAVIRERLHSDVVLIRQVAEYIIHS-------GGKRLRPALVLFS 55 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A + ++ A +E IH +L+HDD+ +D +RRG T + + +++ G+ Sbjct: 56 AGAMGYRGQSHHQLAAVVEFIHTATLLHDDV--VDESELRRGNKTANALFGNAASVLVGD 113 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L T AF+++ ++R +L+ NI +G + Q+L+ + +D + Sbjct: 114 FLYTRAFQMMVGVG-----DMRVMQVLADATNIIAEGEVL-QLLNCHNADVDIEDYLRVI 167 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KT L A GAI+ A++ ++ ++ FG +LG FQ+ DD+LD D Sbjct: 168 RYKTAKLFEAATRLGAILGGANEEQERKVAAFGMHLGTAFQIIDDVLDYSSDEA 221 >gi|331684834|ref|ZP_08385426.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H299] gi|331078449|gb|EGI49655.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H299] Length = 323 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 113/226 (50%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + T+++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNATSVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|213859721|ref|ZP_03385425.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 318 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 27 SDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 87 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + I+A + +++ L+ Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQD 198 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219 >gi|332523011|ref|ZP_08399263.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176] gi|332314275|gb|EGJ27260.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176] Length = 289 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 81/228 (35%), Positives = 125/228 (54%), Gaps = 11/228 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-H 69 +I+ L + + +++L++AIRY+ GGK+IR L+ E F+V Sbjct: 3 KVDKINQALTRFYQEKQA-----VSEQLIAAIRYSAESGGKRIRPLLLLELLEAFSVTLT 57 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + + AA+E IH SLIHDDLP+MDN RRG T H ++DE TAI+AG+ L AF Sbjct: 58 DSHYDIAAALEMIHTGSLIHDDLPAMDNDDYRRGCLTNHKKFDEATAILAGDSLFLDAFA 117 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187 +I+ T L NI+ L+ SL+++ G GM+GGQMLD++ E + ++ I KTG Sbjct: 118 LIA--GTNLSANIKVDLIESLSNSSGTFGMVGGQMLDMKAEGQELTLAELQEIHSHKTGC 175 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + + A +A + + G+ +G FQ+ DD+LD D Sbjct: 176 LLAYPFWAAAKIAEVDEQILLEIYQAGQKVGHAFQVRDDILDVTADFA 223 >gi|260596184|ref|YP_003208755.1| octaprenyl-diphosphate synthase [Cronobacter turicensis z3032] gi|260215361|emb|CBA27367.1| Octaprenyl-diphosphate synthase [Cronobacter turicensis z3032] Length = 323 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 27 SDVQLINQLGYYIVSGGGKRIRPMIAVLAARALGYEGKAHVTIAALIEFIHTATLLHDDV 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++S + I+ ++S Sbjct: 87 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----IKVLEVMSEAV 139 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + I+A AS+ ++ L+ Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEESYMRVIYSKTARLFEAAAQCSGILAGASEAQERALQD 198 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219 >gi|315125809|ref|YP_004067812.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas sp. SM9913] gi|315014323|gb|ADT67661.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Pseudoalteromonas sp. SM9913] Length = 295 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 9/234 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + +++ + L+ Q + ++ + A Y+++ GGK++R FLV Sbjct: 2 SIKEQIKLAQDDVANTLNLYFEQ-----PLESDNTIKEATHYSVMNGGKRLRPFLVYTTG 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + + AAIECIH YSL+HDDLP+MD+ +RRG+PT HI Y E AI+AG+ Sbjct: 57 KILGADKRDLDVLAAAIECIHSYSLVHDDLPAMDDDDLRRGRPTCHIVYGEAQAILAGDA 116 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180 L T AFE+I+ + + +++ +L H GLQGM+ GQ DI D+ I ++ I Sbjct: 117 LQTLAFELIAKHTFKCSTEAQLKMIAALAHASGLQGMVAGQGRDIAATDKVITVDELERI 176 Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 K+KTGAL+ A GA+ A + SQ + L FG +G+ FQ+ DD+LD E D Sbjct: 177 HKLKTGALINCAITLGALCAPNTSQQTLDNLSTFGYAIGLAFQVHDDILDVEGD 230 >gi|254191045|ref|ZP_04897550.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237] gi|254301703|ref|ZP_04969146.1| geranyltranstransferase [Burkholderia pseudomallei 406e] gi|157811595|gb|EDO88765.1| geranyltranstransferase [Burkholderia pseudomallei 406e] gi|157938718|gb|EDO94388.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237] Length = 362 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 121/230 (52%), Gaps = 14/230 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68 + ++ + LD +L + L +A+RYA+ GG K++R L L + + Sbjct: 74 KTAIRQTEATLDRILPCADGRLTA-----LHAAMRYAVFGGGKRLRPLLCHAAGELVDAS 128 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 +V A IE IH +SLI DDLP+MDN +R G+ T+H QYD TA++A +GL++ AF Sbjct: 129 REALAQVSAVIEMIHVFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAF 188 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTG 186 +S L ++R LM L +IG G+ GGQ +D+ +D T++ + +MKTG Sbjct: 189 LALSEAPLPL--DVRVALMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMHRMKTG 246 Query: 187 ALMCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLADDLLDCEE 232 AL+ A G + E + +GE LG+ +Q+ DD+LD Sbjct: 247 ALIRAAVRMGVLCGTVPGAELGAAWRAVSEYGERLGLAYQVVDDILDSTA 296 >gi|16762067|ref|NP_457684.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766600|ref|NP_462215.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143556|ref|NP_806898.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415234|ref|YP_152309.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364164|ref|YP_002143801.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205354206|ref|YP_002228007.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858553|ref|YP_002245204.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213053033|ref|ZP_03345911.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426652|ref|ZP_03359402.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213646987|ref|ZP_03377040.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238910099|ref|ZP_04653936.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825815|ref|ZP_06544983.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25314317|pir||AH0903 octaprenyl-diphosphate synthase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421862|gb|AAL22174.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504370|emb|CAD07822.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139191|gb|AAO70758.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129491|gb|AAV78997.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095641|emb|CAR61209.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205273987|emb|CAR38993.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710356|emb|CAR34714.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261248470|emb|CBG26307.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301159854|emb|CBW19373.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|322684901|gb|EFY80899.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323211311|gb|EFZ96155.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323224032|gb|EGA08325.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230319|gb|EGA14438.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323246927|gb|EGA30893.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254140|gb|EGA37960.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|332990163|gb|AEF09146.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 323 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 27 SDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 87 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + I+A + +++ L+ Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQD 198 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219 >gi|309775474|ref|ZP_07670476.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53] gi|308916770|gb|EFP62508.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53] Length = 282 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 117/222 (52%), Gaps = 10/222 (4%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D + + R+ A++Y+L+ GGK++R L+ + + + AAIE Sbjct: 5 DFEDYLTHCLDSVPASRVRDAMQYSLMAGGKRVRPKLLLAVLNAYAQEEAIGYPLAAAIE 64 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSLIHDDLP+MDN +RRG T H++Y E AI+AG+GLLTYAF + KT Sbjct: 65 MIHTYSLIHDDLPAMDNDTLRRGMATCHVKYGEDVAILAGDGLLTYAFA--QAMKTACPA 122 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGA 197 + ++ L+ G GM+ GQ+ D++ E ID + I KTG L+ GA Sbjct: 123 DELVEICRLLSDYSGAGGMILGQIKDLEGEANPHIDLQSLQDIHFYKTGKLLTLPLLCGA 182 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++A + + G ++G+ FQ+ DD+LD E+L K Sbjct: 183 LLAGH-KADLPVWEMIGADIGLSFQIQDDILDVTSTVEELGK 223 >gi|33599305|ref|NP_886865.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50] gi|33575351|emb|CAE30814.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50] Length = 321 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 114/234 (48%), Gaps = 16/234 (6%) Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59 MN L + + ++ K +D ++ D L ++T + + + GGK++R +V Sbjct: 1 MNLPELIAPIADDMKAVDAVIRDRLNSDVVLIRTIGDYIIGA-------GGKRMRPAMVL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A +E IH +L+HDD+ +D +RRG+ T + + +++ Sbjct: 54 MVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLV 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + +FE++ D++R +LS + +G + Q+L++ D + + + Sbjct: 112 GDYLYSRSFEMMVEA-----DSMRIMQILSQATTVIAEGEVL-QLLNVHDPDVSQERYLQ 165 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KT L A + GA++A AS ++ +G ++G FQL DD+LD D Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGASPEQETAAAAYGRHVGAAFQLVDDVLDYSGD 219 >gi|239814577|ref|YP_002943487.1| polyprenyl synthetase [Variovorax paradoxus S110] gi|239801154|gb|ACS18221.1| Polyprenyl synthetase [Variovorax paradoxus S110] Length = 305 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 85/235 (36%), Positives = 125/235 (53%), Gaps = 11/235 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 L S + R++ L + L A+RYA+L GGK++R LV Sbjct: 12 ARLASWSDPHLARVEAALSR-------WVGVDAPVLLGDAMRYAVLDGGKRLRPLLVLAA 64 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + N ALR A E IH YSL+HDDLPSMDN +RRGKPTVH+++ E A++AG+ Sbjct: 65 SEAVGGNAAAALRAACATELIHAYSLVHDDLPSMDNDVLRRGKPTVHVKFGEADALLAGD 124 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L AFE+++ ++ +I++ L L G QGM GGQ +D+ +DE Q+ Sbjct: 125 ALQALAFELLTPEGDEIPASIQAALCRLLARAAGSQGMAGGQAIDLASVGLALDEAQLRE 184 Query: 180 IQKMKTGALMCFACESG-AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + ++KTGAL+ + E G A + LR +G +G+ FQ+ DD+LD D Sbjct: 185 MHRLKTGALLQGSVEMGAACAGAVAPAALSALRDYGAAIGLAFQVVDDILDVTAD 239 >gi|16800468|ref|NP_470736.1| hypothetical protein lin1400 [Listeria innocua Clip11262] gi|16413873|emb|CAC96631.1| lin1400 [Listeria innocua Clip11262] Length = 293 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 85/222 (38%), Positives = 129/222 (58%), Gaps = 6/222 (2%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD+ L + + + +L ++ Y++ GGK+IR LV N+ + L+ Sbjct: 13 KVLDESLFKEINMRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNIEPMRGLKTA 70 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E IH YSLIHDDLP+MD+ RRGK T H Y + TAI+AG+ LLT AF I++ + Sbjct: 71 TALEMIHTYSLIHDDLPAMDDDDYRRGKWTNHKIYGDATAILAGDALLTLAFSILAEDEN 130 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194 L R L+ ++++ G +GM+GGQ D++ E + ++ I KTG L+ FA Sbjct: 131 -LSFETRIALINQISYSSGAEGMVGGQQADMEAENKQVTLEELASIHARKTGELLIFAVT 189 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 S A +A A+ + +RLR F EN+GI FQ++DD+LD D K Sbjct: 190 SAAKIAEATPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231 >gi|290790316|pdb|3LVS|A Chain A, Crystal Structure Of Farnesyl Diphosphate Synthase From Rhodobacter Capsulatus Sb1003 gi|290790317|pdb|3LVS|B Chain B, Crystal Structure Of Farnesyl Diphosphate Synthase From Rhodobacter Capsulatus Sb1003 Length = 298 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 85/232 (36%), Positives = 132/232 (56%), Gaps = 15/232 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 +L+E ++T + A+ + L A+ YA GGK++R+FL E A++ Sbjct: 4 FSERLKEIQDAVETAM-------AAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAI 56 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 ++ A+ A+E +H YSL+HDD+P MDN +RRG PTVH ++D+ TA++AG+ L Sbjct: 57 HGISMAQAMPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQ 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180 T AFE+ + P +N R L+ +L G +GM+ GQ LDI E + ++ + Sbjct: 117 TLAFELCTDPVLGSAEN-RVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDEIIRL 175 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 Q KTGAL+ FA ++GAI+A A + L + LG+ FQ+ADD+LD E Sbjct: 176 QAGKTGALISFAAQAGAILAGAD---RGPLTAYATALGLAFQIADDILDVEG 224 >gi|213622139|ref|ZP_03374922.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 317 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 21 SDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 80 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 81 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 133 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + I+A + +++ L+ Sbjct: 134 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQD 192 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 193 YGRYLGTAFQLIDDLLDYSAD 213 >gi|194099628|ref|YP_002002759.1| IspA [Neisseria gonorrhoeae NCCP11945] gi|239999827|ref|ZP_04719751.1| hypothetical protein Ngon3_10168 [Neisseria gonorrhoeae 35/02] gi|240017431|ref|ZP_04723971.1| hypothetical protein NgonFA_09768 [Neisseria gonorrhoeae FA6140] gi|240081573|ref|ZP_04726116.1| hypothetical protein NgonF_09730 [Neisseria gonorrhoeae FA19] gi|240118810|ref|ZP_04732872.1| hypothetical protein NgonPID_10204 [Neisseria gonorrhoeae PID1] gi|240124349|ref|ZP_04737305.1| hypothetical protein NgonP_10505 [Neisseria gonorrhoeae PID332] gi|240129023|ref|ZP_04741684.1| hypothetical protein NgonS_10439 [Neisseria gonorrhoeae SK-93-1035] gi|268595637|ref|ZP_06129804.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02] gi|268597669|ref|ZP_06131836.1| geranyltranstransferase [Neisseria gonorrhoeae FA19] gi|268604521|ref|ZP_06138688.1| geranyltranstransferase [Neisseria gonorrhoeae PID1] gi|268682976|ref|ZP_06149838.1| geranyltranstransferase [Neisseria gonorrhoeae PID332] gi|268687403|ref|ZP_06154265.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035] gi|193934918|gb|ACF30742.1| IspA [Neisseria gonorrhoeae NCCP11945] gi|268549026|gb|EEZ44444.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02] gi|268551457|gb|EEZ46476.1| geranyltranstransferase [Neisseria gonorrhoeae FA19] gi|268588652|gb|EEZ53328.1| geranyltranstransferase [Neisseria gonorrhoeae PID1] gi|268623260|gb|EEZ55660.1| geranyltranstransferase [Neisseria gonorrhoeae PID332] gi|268627687|gb|EEZ60087.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035] gi|317165116|gb|ADV08657.1| IspA [Neisseria gonorrhoeae TCDC-NG08107] Length = 298 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 8/237 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----GNEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G Sbjct: 59 ASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 + L T AF+++S P + +L+ L + + + + Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLER 178 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA S E L + LG+ FQ+ DD+LDCE D Sbjct: 179 MHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTA 235 >gi|319947470|ref|ZP_08021702.1| geranyltranstransferase [Streptococcus australis ATCC 700641] gi|319746410|gb|EFV98671.1| geranyltranstransferase [Streptococcus australis ATCC 700641] Length = 295 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 76/231 (32%), Positives = 120/231 (51%), Gaps = 12/231 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L+E + ++ ++ + Q RL+ +I Y++ GGK+IR L+ E F+ Sbjct: 3 LEEKLQGVEKEIEGF------YEAKQIAPRLVESILYSVRAGGKRIRPLLLLELLEAFHA 56 Query: 68 NH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 +V AA+E IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L Sbjct: 57 PILEAHFQVAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDSLFLD 116 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 AF ++ L +I+ QL+ L+ G GM+ GQ+LD++ E + Q+ +I K Sbjct: 117 AFGCVAEA--DLPASIQVQLIALLSDASGTAGMVAGQVLDMEGEGASLTLDQLQVIHANK 174 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 TG L+ + ++ I+ L G +LG+ FQ+ DD+LD D Sbjct: 175 TGRLLAYPFQAAGILLELEPAVATLLEEIGIHLGLAFQIRDDILDVTADFA 225 >gi|32490894|ref|NP_871148.1| hypothetical protein WGLp145 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166100|dbj|BAC24291.1| ispA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 300 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 137/242 (56%), Gaps = 13/242 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN L S L + I+ IL L ++ ++ N L A++YALL GGK++R+FLV Sbjct: 1 MNNFLLS-LTKIQNHINLILKKYL-----NIFSKKNMNLTLAMKYALLNGGKRLRAFLVY 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + NV+ + A+IECIH YSLIHDDLPSMDN RRG+ + H++++E AI+A Sbjct: 55 CIGKMLNVSSNNLDCIAASIECIHAYSLIHDDLPSMDNDRFRRGRESCHVKFNEYIAILA 114 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L + AF I+S+ + N R +++ L++ G +GM GQ LD++++ I Q Sbjct: 115 GDSLQSLAFNILSTVNMPDVSVNNRMKMISILSYASGAKGMCLGQSLDLENQGSLISIKQ 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I K KT L+ A + ++ ++ L + +++G+ FQ+ DD+L+ Sbjct: 175 LEEIYKYKTSFLIYAATRMTILSSNIKNKKILINLIKYSKSIGLAFQIQDDILNVIG--S 232 Query: 236 KK 237 KK Sbjct: 233 KK 234 >gi|317479594|ref|ZP_07938721.1| polyprenyl synthetase [Bacteroides sp. 4_1_36] gi|316904256|gb|EFV26083.1| polyprenyl synthetase [Bacteroides sp. 4_1_36] Length = 346 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 19/229 (8%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69 E +RI++ + +L T+ L + + Y L +GGK+IR L+ +L+ + Sbjct: 28 ELLERINSHIAEL-------QFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDI 80 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 IE H Y+L+HDDL MD RRGK TVH +D+ AI++G+ +L A++ Sbjct: 81 TRIFNPATGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQ 138 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTG 186 ++ + + ++ + GQ LD++ E + + + ++KT Sbjct: 139 FMAQCPVEHLKEV------MDIFSLTALEICEGQQLDMEFEHRKDVKAEEYLEMIRLKTS 192 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + + GA++ AS + E+L FG NLG+ FQL DD LD D Sbjct: 193 VLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDVYGDTA 241 >gi|114048295|ref|YP_738845.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7] gi|113889737|gb|ABI43788.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7] Length = 293 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 138/238 (57%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L + ++E R+ DD L Q S ++ +L +A+ + ALLGGK+IR FLV Sbjct: 2 LVNAIKEYQLRV----DDQLKQRFSTLE-DTAAQLKAAMTHGALLGGKRIRPFLVYSVGQ 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V+ AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L Sbjct: 57 MFGVSLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 T AFEI++ + ++ +L G +GM GGQ +D D+ ID + + Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLH 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 MKTGAL+ A E I A+A ++E + + F +G+ FQ+ DD+LD E+L K Sbjct: 177 NMKTGALISCAVELALIAANAPKDEYQTMMEFAHAVGLAFQVQDDILDIIATTEELGK 234 >gi|88607928|ref|YP_504938.1| geranyltranstransferase [Anaplasma phagocytophilum HZ] gi|88598991|gb|ABD44461.1| geranyltranstransferase [Anaplasma phagocytophilum HZ] Length = 280 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 85/234 (36%), Positives = 124/234 (52%), Gaps = 6/234 (2%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M + ++++ S + L L+ + L+ AI Y L GK +R+FL + Sbjct: 2 MRCHIKERVKDFSNLVGKELTKLIETQVTGGPAAG---LVDAIGYCILPPGKCLRAFLAS 58 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A F V+ L + AIE +H YSL+HDDLPSMDN RRGK + HI++ E A++ Sbjct: 59 SVAQTFGVSIERTLPLCLAIEVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLT 118 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ LLT FE++SS ++ ++ ++ G +GM+ GQ LD+ + V Sbjct: 119 GDALLTLTFELLSSMDESC--TVKCAIIRVISDACGHRGMVAGQALDMGNLEPSLEAVKQ 176 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 I K+KT L ACESGAI+A S ++ L +GE LG FQ DDL D ED Sbjct: 177 IHKLKTARLFSAACESGAILAEVSTANQQALASYGETLGCAFQAKDDLCDINED 230 >gi|89093477|ref|ZP_01166425.1| dimethylallyltransferase [Oceanospirillum sp. MED92] gi|89082167|gb|EAR61391.1| dimethylallyltransferase [Oceanospirillum sp. MED92] Length = 293 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 11/236 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + +L+ R+D L++ L + + L ++RY+L GGK++R LV Sbjct: 2 EIRQQLKHYQSRVDNHLENCLPSESI------DPLLQESMRYSLFNGGKRVRPALVYLVN 55 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + A AAIECIH YSL+HDDLP+MD+ +RRGKPT HI YDE TAI+AG+ Sbjct: 56 QILGGTDEAADNAAAAIECIHSYSLVHDDLPAMDDDDLRRGKPTCHIAYDEATAILAGDA 115 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 L AFE++++ + Q D+ + +L+ L+ G GM+ GQ D++ + Q+ + Sbjct: 116 LQCLAFELLANDQQQSADS-KIKLIQLLSQASGHGGMVVGQSFDLRHVGKPLTLEQLEAM 174 Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ A GA S+ + + L + +G+ FQ+ DD+LD E D Sbjct: 175 HQHKTGALLLCAVHMGAACGPRVSKEQLDALTRYALAIGLAFQVQDDILDIEGDSE 230 >gi|319957682|ref|YP_004168945.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511] gi|319420086|gb|ADV47196.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511] Length = 294 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 75/216 (34%), Positives = 121/216 (56%), Gaps = 5/216 (2%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAA 78 ++ L Q + T H D + L GGK+ R L+ + +A+ A Sbjct: 4 FENFLTQNLPVVDTFHPDYNEALRAMVLAGGKRFRPRLLLGIVEAYAPLLVESAMTPALA 63 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E H YSLIHDDLP+MD+ +RRG+PT+H ++DE AI+AG+ L T+AFE++S ++ Sbjct: 64 LEIFHTYSLIHDDLPAMDDADLRRGEPTLHTRFDEALAILAGDALNTHAFEMLS--RSAF 121 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196 + ++R +L+ L N G GM+ GQ +D++ E + QV + KT L+ A E G Sbjct: 122 RADVRIELVRILAENGGSGGMVLGQAIDLEFEKSPLSLEQVVELHTNKTAKLIAAALEMG 181 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A++ + + L FG +LG++FQ+ DD+LD + Sbjct: 182 AVIVDLPKETRRALYRFGIDLGLLFQVQDDILDATQ 217 >gi|322834065|ref|YP_004214092.1| Polyprenyl synthetase [Rahnella sp. Y9602] gi|321169266|gb|ADW74965.1| Polyprenyl synthetase [Rahnella sp. Y9602] Length = 309 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 85/243 (34%), Positives = 130/243 (53%), Gaps = 13/243 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 G +L+ +R+D +L + + L+ A+RY ALLGGK++R +LV Sbjct: 11 DGFTHELRAMQQRVDEVLTAYISAL-----PLADLPLVEAMRYGALLGGKRLRPYLVYAS 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 LF+++ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI++G+ Sbjct: 66 GQLFSLDLKNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILSGD 125 Query: 122 GLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 L T AF I++ + + R ++ L G GM GGQ LD+ E + + Sbjct: 126 ALQTLAFSILADSEMPDVAVKDRLAMISELALASGSSGMCGGQALDLAAEGQQVGLDALE 185 Query: 179 MIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---L 234 I + KTGAL+ A GA+ A + L + + +G+ FQ+ DD+LD D L Sbjct: 186 QIHRHKTGALIRAAVRMGALAAGETGRAVLPILDNYAQAIGLAFQVQDDILDVVGDTATL 245 Query: 235 PKK 237 K+ Sbjct: 246 GKR 248 >gi|308184713|ref|YP_003928846.1| geranyltranstransferase [Helicobacter pylori SJM180] gi|308060633|gb|ADO02529.1| geranyltranstransferase [Helicobacter pylori SJM180] Length = 303 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71 + L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SNA--LLESHIIVELIKILSVNGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 192 SASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238 >gi|166711441|ref|ZP_02242648.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 291 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 114/209 (54%), Gaps = 1/209 (0%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L+ A T+ RL +A+R+A+LGG K++R LV +LF A+E IH Sbjct: 17 LEAALPSATRAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIH 76 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ + + Sbjct: 77 AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAAASASAELRVG 136 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ +D + + + +KTGAL+ + GA+ A+ Sbjct: 137 WMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQRMHALKTGALIRASVHMGALTGGAA 196 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232 +++RL F + LG+ FQ+ DD+LD E Sbjct: 197 TADQQRLDEFADALGLAFQVRDDILDVES 225 >gi|253995893|ref|YP_003047957.1| trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8] gi|253982572|gb|ACT47430.1| Trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8] Length = 322 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A LF ++ A +E IH +L+HDD+ +D RRG+ T + Sbjct: 43 GGKRLRPMLVLLAAGLFGEIQTQHHQLAAVVEFIHTATLLHDDV--VDESSKRRGQSTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + + AF+++ + + N+R +LS N+ +G + Q+L++ Sbjct: 101 ALFGNAASVLVGDFVYSRAFQMMVAVQ-----NMRVMEVLSNATNVIAEGEVL-QLLNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I + + KT L A GAI++ AS ++ L +G +LG FQL DD+L Sbjct: 155 NADISDKAYLQVIHYKTAKLFEAATRLGAIISEASAKDEAALTAYGMHLGTAFQLIDDIL 214 Query: 229 DCEE---DLPK 236 D D+ K Sbjct: 215 DLSGNSEDIGK 225 >gi|315586874|gb|ADU41255.1| geranyltranstransferase [Helicobacter pylori 35A] Length = 303 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 124/231 (53%), Gaps = 15/231 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67 KR ++ L+ L H+++ H + L GGK+ R L +L Sbjct: 14 KRFESFLNHHHL----HLESFHPYLKKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+ Sbjct: 70 QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S+ + L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT Sbjct: 130 FELLSN--SLLESHIIVELIKILSTNGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKT 187 Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238 >gi|251790664|ref|YP_003005385.1| geranyltranstransferase [Dickeya zeae Ech1591] gi|247539285|gb|ACT07906.1| Polyprenyl synthetase [Dickeya zeae Ech1591] Length = 303 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 86/239 (35%), Positives = 128/239 (53%), Gaps = 9/239 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M L +L + +RID L + S + Q + + + ALLGGK++R FLV Sbjct: 1 MTDFLK-QLAAHHQRIDAALSHFI----SALPFQSSPLVAAMAHGALLGGKRLRPFLVYS 55 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 LF + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG Sbjct: 56 TGRLFAIAQDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILAG 115 Query: 121 NGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV 177 + L T AF I++ P + D R ++ L G+ GM GGQ LD++ E + D + Sbjct: 116 DALQTLAFSILADAPMPGVSDRDRLAMISELARASGVAGMCGGQALDLEAEGLQVDLQTL 175 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 I + KTGAL+ + GA+ A L + + +G+ FQ+ DD+LD D Sbjct: 176 ERIHRHKTGALIRASVRLGALAAGERGRLALPCLDRYADAIGLAFQVQDDILDVIGDSA 234 >gi|170717621|ref|YP_001784702.1| polyprenyl synthetase [Haemophilus somnus 2336] gi|168825750|gb|ACA31121.1| Polyprenyl synthetase [Haemophilus somnus 2336] Length = 296 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 87/234 (37%), Positives = 128/234 (54%), Gaps = 11/234 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 LQE+ +RI+ L+ L A++Y LLGGK+IR FLV Sbjct: 4 FAQDLQESKQRIN-----FFLEKQFECIDSSPSPLAEAMKYGLLLGGKRIRPFLVYATGK 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + N + AAIE IH YSLIHDDLP+MDN +RRG PT HI +D TAI+AG+ L Sbjct: 59 MLGANLIQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 +AFE+++ L + L+ +L + G++GM GQ LD+ E I+ + + I Sbjct: 119 QPFAFELLTQ-TPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIH 177 Query: 182 KMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTGAL+ A + G I + A+ +E+L + +G+ FQ+ DD+LD E + Sbjct: 178 RNKTGALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIEGE 231 >gi|58582922|ref|YP_201938.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58427516|gb|AAW76553.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 291 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 113/212 (53%), Gaps = 1/212 (0%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80 + L+ T RL +A+R+A+LGG K++R LV +LF A+E Sbjct: 14 ERNLEAGLPSATCAPHRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVE 73 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ + Sbjct: 74 LIHTYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAAASASAEL 133 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 + L+ +D + + + +KTGAL+ + GA+ Sbjct: 134 RVGWMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQRMHALKTGALIRASVHMGALTG 193 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A+ +++RL F + LG+ FQ+ DD+LD E Sbjct: 194 GAATADQQRLDEFADALGLAFQVRDDILDVES 225 >gi|4633648|gb|AAD26851.1| geranylgeranyl diphosphate synthase [Archaeoglobus fulgidus] Length = 317 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 17/236 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L ++ + ++ I+ +++LL + + L A R+ + GGK++R + Sbjct: 2 LKEEIAKRAEIINKAIEELLPE-------REPIGLYKAARHLIKAGGKRLRPVISLLAVE 54 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 ++ + +IE IH ++L+HDD+ MD +RRG PTVH Y E TAI+AG+ L Sbjct: 55 ALGKDYRKIIPAAVSIETIHNFTLVHDDI--MDRDEMRRGVPTVHRVYGEATAILAGDTL 112 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMI 180 AF++++ + + ++ MLS + GQ D+ E + + Sbjct: 113 FAEAFKLLTKCDVESEGIRKATEMLSDV----CIKICEGQYYDMSFEKKESVSEEEYLRM 168 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++KTG L+ + A++ S+ + L +G GI FQ+ DDLLD E+ K Sbjct: 169 VELKTGVLIAASAALPAVLFGESEEIVKALWDYGVLSGIGFQIQDDLLDLTEETGK 224 >gi|317177716|dbj|BAJ55505.1| geranyltranstransferase [Helicobacter pylori F16] Length = 303 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 74/231 (32%), Positives = 125/231 (54%), Gaps = 15/231 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67 +R ++ L+ L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+ Sbjct: 70 QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S+ + L+ +I +L+ L+ N G++GM+ GQ+LD E ++ Q+ + + KT Sbjct: 130 FELLSN--SLLESHIIVELIKILSANGGIKGMVLGQVLDCYFENTPLNLEQLTFLHEHKT 187 Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238 >gi|332673768|gb|AEE70585.1| geranyltranstransferase [Helicobacter pylori 83] Length = 303 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 74/229 (32%), Positives = 123/229 (53%), Gaps = 15/229 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67 +R ++ L+ L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+ Sbjct: 70 QQTEYFKIALGIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYS 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S+ + L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT Sbjct: 130 FELLSN--SLLESHIIVELIKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKT 187 Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233 L+ + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236 >gi|293392228|ref|ZP_06636562.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952762|gb|EFE02881.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 296 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 83/232 (35%), Positives = 125/232 (53%), Gaps = 7/232 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67 ++ + + ++ L + +H+ + L A++Y LLGGK+IR FLV + Sbjct: 4 FSQDLQHVQQRINQFLAKQFAHIDSASAP-LAEAMKYGLLLGGKRIRPFLVYATGKMLGA 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AAIE IH YSLIHDDLP+MD+ +RRG T HI +DE TAI+AG+ L T A Sbjct: 63 DMAHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTLA 122 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 FEI++ L + L+ +L+ G++GM GQ LD+ E I ++ I KT Sbjct: 123 FEILTDI-PHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKT 181 Query: 186 GALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 GAL+ A + G I + A ++L + +G+ FQ+ DD+LD E D Sbjct: 182 GALLTAALKMGFICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSA 233 >gi|188990958|ref|YP_001902968.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str. B100] gi|167732718|emb|CAP50912.1| geranyltranstransferase [Xanthomonas campestris pv. campestris] Length = 291 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 115/233 (49%), Gaps = 9/233 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 M+ L + R + LD L A RL +A+R+A+LGG K++R LV Sbjct: 1 MSAAL---FERWLARTERQLDACLPSPALA-----PQRLHAAMRHAVLGGGKRMRPLLVY 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +LF + A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+A Sbjct: 53 ASGALFGAEEGSLDAPAVAVELIHAYSLVHDDLPAMDDDALRRGRPTVHIAFDEATAILA 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L AFE+++ + L+ +D + + Sbjct: 113 GDALQARAFELLAEAPADAALRVGWLQSLASAAGAAGMCGGQALDIDATGQVQALDALQR 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + +KTGAL+ A G + A +++RL F + LG+ FQ+ DD+LD E Sbjct: 173 MHALKTGALIRAAVRMGVLTGGAGIADQQRLDAFADALGLAFQVRDDILDVES 225 >gi|50119637|ref|YP_048804.1| octaprenyl diphosphate synthase [Pectobacterium atrosepticum SCRI1043] gi|49610163|emb|CAG73603.1| octaprenyl-diphosphate synthase [Pectobacterium atrosepticum SCRI1043] Length = 323 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALAYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S +I+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|261820112|ref|YP_003258218.1| octaprenyl diphosphate synthase [Pectobacterium wasabiae WPP163] gi|261604125|gb|ACX86611.1| Trans-hexaprenyltranstransferase [Pectobacterium wasabiae WPP163] Length = 323 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALAYDGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S +I+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|116052080|ref|YP_789076.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14] gi|254242726|ref|ZP_04936048.1| geranyltranstransferase [Pseudomonas aeruginosa 2192] gi|313109486|ref|ZP_07795442.1| geranyltranstransferase [Pseudomonas aeruginosa 39016] gi|115587301|gb|ABJ13316.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14] gi|126196104|gb|EAZ60167.1| geranyltranstransferase [Pseudomonas aeruginosa 2192] gi|310881944|gb|EFQ40538.1| geranyltranstransferase [Pseudomonas aeruginosa 39016] Length = 295 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 10/236 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + R+D LD L + +Q RL A+RY+++ GGK++R L Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL Sbjct: 57 ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 AFE+++ + +++ ML+ G GM+GGQ +D+ +D+ + ++ Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTGAL+ + GA+ + A L + E +G+ FQ+ DD+LD E D Sbjct: 177 HRHKTGALIEASVRLGALASGRAEPAALAALERYAEAIGLAFQVQDDILDVESDTA 232 >gi|307129369|ref|YP_003881385.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937] gi|306526898|gb|ADM96828.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937] Length = 323 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLTARALNYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLAS-----LRVMSVMSDAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A ++ AI++ AS ++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEDSYMRVIYSKTARLFEAAAQASAILSGASSEQELALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|317014338|gb|ADU81774.1| geranyltranstransferase [Helicobacter pylori Gambia94/24] Length = 303 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 116/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV-----NHLT 71 + L H++ H + L GGK+ R L +L Sbjct: 14 ERFESFLKNHHLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYLNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ L+ I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SNA--LLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + + + L+ FG +G+ FQ+ DD++D +D Sbjct: 192 SASLMMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEK 238 >gi|261867966|ref|YP_003255888.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413298|gb|ACX82669.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Aggregatibacter actinomycetemcomitans D11S-1] Length = 296 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 83/232 (35%), Positives = 125/232 (53%), Gaps = 7/232 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67 ++ + + ++ L + +H+ + L A++Y LLGGK+IR FLV + Sbjct: 4 FSQDLQHVQQRINHFLAKQFAHIDSA-PAPLAEAMKYGLLLGGKRIRPFLVYATGKMLGA 62 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AAIE IH YSLIHDDLP+MD+ +RRG T HI +DE TAI+AG+ L T A Sbjct: 63 DMAHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTLA 122 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 FEI++ L + L+ +L+ G++GM GQ LD+ E I ++ I KT Sbjct: 123 FEILTDI-PHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKT 181 Query: 186 GALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 GAL+ A + G I + A ++L + +G+ FQ+ DD+LD E D Sbjct: 182 GALLTAALKMGFICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSA 233 >gi|113461047|ref|YP_719114.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT] gi|112823090|gb|ABI25179.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT] Length = 296 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 87/234 (37%), Positives = 128/234 (54%), Gaps = 11/234 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 LQE+ +RI+ L+ L A++Y LLGGK+IR FLV Sbjct: 4 FAQDLQESKQRIN-----FFLEKQFECIDSSPSPLAEAMKYGLLLGGKRIRPFLVYATGK 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + N + AAIE IH YSLIHDDLP+MDN +RRG PT HI +D TAI+AG+ L Sbjct: 59 MLGANLIQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 +AFE+++ L + L+ +L + G++GM GQ LD+ E I+ + + I Sbjct: 119 QPFAFELLTQ-TPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIH 177 Query: 182 KMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTGAL+ A + G I + A+ +E+L + +G+ FQ+ DD+LD E + Sbjct: 178 RNKTGALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIEGE 231 >gi|89052978|ref|YP_508429.1| trans-hexaprenyltranstransferase [Jannaschia sp. CCS1] gi|88862527|gb|ABD53404.1| Trans-hexaprenyltranstransferase [Jannaschia sp. CCS1] Length = 335 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 114/228 (50%), Gaps = 16/228 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 L + L+++ ++T++ + M ++H R+ + + GGK+IR L C Sbjct: 12 DRLSAALKDDLTAVNTLI-------RARMASKHAPRIPEVTAHLVEAGGKRIRPMLTLAC 64 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A L + +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 65 ARLCGYSGDDHVKLAATVEFIHTATLLHDDV--VDESEQRRGRPTANLLWDNQSSVLVGD 122 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L AF+++ P N+R +LS +G + Q+ + E + Sbjct: 123 YLFARAFQLMVEPG-----NLRVLDILSNAAATIAEGEVL-QLTVASNIETPEETYLQVI 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + KT AL ACE G ++A + L +G+ LG+ FQ+ADDLLD Sbjct: 177 RGKTAALFEAACEVGGVIAGRDTFIIQALATYGDGLGVAFQMADDLLD 224 >gi|325294094|ref|YP_004279958.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium sp. H13-3] gi|325061947|gb|ADY65638.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium sp. H13-3] Length = 324 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 112/235 (47%), Positives = 158/235 (67%), Gaps = 3/235 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 +KL++N+ + +++L LL A + LL A+R+ L GGK++R FLV E Sbjct: 27 NFETKLRDNAAQTESLLGRLLSAEARADEITRPQNLLDAMRHGVLNGGKRLRPFLVIEST 86 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +L N A VGAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVH ++DE TAI+AG+ Sbjct: 87 ALLGGNAEAAHHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDS 146 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180 LLT AF+II+S + L+ + ++ L+LSL G+ GM GGQ LD+ E DE + + Sbjct: 147 LLTLAFDIIASDENPLEADRKAALVLSLARAAGIGGMAGGQALDLAAEKNAPDEAGIITL 206 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q MKTGAL+ FACE+GAI+A + +E++RLR FGE +G+ FQLADDLLD D Sbjct: 207 QAMKTGALLRFACEAGAIIAGSDVSERQRLRLFGEKIGLAFQLADDLLDLTADAA 261 >gi|270290381|ref|ZP_06196606.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4] gi|270281162|gb|EFA26995.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4] Length = 294 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN ++ ++ I+ +L+ + H +L + Y+ GGK++R ++ Sbjct: 1 MNKEFNEFVRRSTPLINDHFAELMEKVEKH-----QPQLARMMAYSFNAGGKRVRPLILL 55 Query: 60 ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 + + L V A+E +H YSLIHDDLP+MDN +RRG+PT H Q+ E AI+ Sbjct: 56 AILEVLGEPINPDVLTVAVALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKQFGEAEAIL 115 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 G+ LLT AF+ +++ T +++ ++ L G +GM+ GQ+ DI+ + Q Sbjct: 116 TGDALLTIAFQWLAA--TGFTAEVKATVIGDLAQAAGPEGMIAGQLQDIEGNHQRYTIEQ 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + + ++KTG ++ F ++ +A + F +N G+ FQ+ DD++D E + Sbjct: 174 LKKLHELKTGQMLIFPAKAALHIAKCETTVATAILRFVQNFGLAFQIHDDIIDVTESSVE 233 Query: 234 LPK 236 L K Sbjct: 234 LGK 236 >gi|317012738|gb|ADU83346.1| geranyltranstransferase IspA [Helicobacter pylori Lithuania75] Length = 303 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 121/231 (52%), Gaps = 15/231 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67 +R ++ L + L H+++ H + L GGK+ R L SL Sbjct: 14 ERFESFLKNHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGQKDYSN 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+ Sbjct: 70 QQTEYFKIALSIECLHTYSLIHDDLPCMDNATLRRNHPTLHAKYDETTAVLIGDALNTYS 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S+ L+ I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT Sbjct: 130 FELLSNA--LLESPIIVELVKILSTNGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKT 187 Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + G + + E + L+ FG G+ FQ+ DD++D +D Sbjct: 188 AKLISASLMMGLVASGIKNEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238 >gi|294678977|ref|YP_003579592.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003] gi|293372070|gb|ADE44162.1| farnesyl diphosphate synthase [Rhodobacter capsulatus] gi|294477797|gb|ADE87185.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003] Length = 288 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 85/232 (36%), Positives = 132/232 (56%), Gaps = 15/232 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 +L+E ++T + A+ + L A+ YA GGK++R+FL E A++ Sbjct: 2 FSERLKEIQDAVETAM-------AAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAI 54 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 ++ A+ A+E +H YSL+HDD+P MDN +RRG PTVH ++D+ TA++AG+ L Sbjct: 55 HGISMAQAMPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQ 114 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180 T AFE+ + P +N R L+ +L G +GM+ GQ LDI E + ++ + Sbjct: 115 TLAFELCTDPVLGSAEN-RVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDEIIRL 173 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 Q KTGAL+ FA ++GAI+A A + L + LG+ FQ+ADD+LD E Sbjct: 174 QAGKTGALISFAAQAGAILAGAD---RGPLTAYATALGLAFQIADDILDVEG 222 >gi|21243489|ref|NP_643071.1| farnesyl-diphosphate synthase [Xanthomonas axonopodis pv. citri str. 306] gi|21109048|gb|AAM37607.1| geranyltranstransferase [Xanthomonas axonopodis pv. citri str. 306] Length = 291 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 1/209 (0%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L+ T RL +A+R+A+LGG K++R LV +LF A+E IH Sbjct: 17 LEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIH 76 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ + + Sbjct: 77 AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAAASASAELRVG 136 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ +D + + + +KTGAL+ A GA+ A+ Sbjct: 137 WMQSLATAAGAAGMCGGQALDIDATGQLQSLQHLQRMHALKTGALIRAAVRMGALTGGAA 196 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232 +++RL F + LG+ FQ+ DD+LD E Sbjct: 197 LADQQRLDEFADALGLAFQVRDDILDVES 225 >gi|59802056|ref|YP_208768.1| hypothetical protein NGO1735 [Neisseria gonorrhoeae FA 1090] gi|240014983|ref|ZP_04721896.1| hypothetical protein NgonD_10150 [Neisseria gonorrhoeae DGI18] gi|240116586|ref|ZP_04730648.1| hypothetical protein NgonPID1_10193 [Neisseria gonorrhoeae PID18] gi|240122052|ref|ZP_04735014.1| hypothetical protein NgonPI_09860 [Neisseria gonorrhoeae PID24-1] gi|260439653|ref|ZP_05793469.1| hypothetical protein NgonDG_00928 [Neisseria gonorrhoeae DGI2] gi|268602255|ref|ZP_06136422.1| geranyltranstransferase [Neisseria gonorrhoeae PID18] gi|291042894|ref|ZP_06568635.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2] gi|293398096|ref|ZP_06642301.1| geranyltranstransferase [Neisseria gonorrhoeae F62] gi|59718951|gb|AAW90356.1| putative geranyltranstransferase [Neisseria gonorrhoeae FA 1090] gi|268586386|gb|EEZ51062.1| geranyltranstransferase [Neisseria gonorrhoeae PID18] gi|291013328|gb|EFE05294.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2] gi|291611359|gb|EFF40429.1| geranyltranstransferase [Neisseria gonorrhoeae F62] Length = 298 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 8/237 (3%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 L + Q + + +L+ L + L A+RYA L GGK++R LV Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----GNEIPHTLHEAMRYAALDGGKRLRPMLVLA 58 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + L + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G Sbjct: 59 ASELGGAMADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTG 118 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 + L T AF+++S P + +L+ L + + + + Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLER 178 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +KTGAL+ A GA S E L + LG+ FQ+ DD+LDCE D Sbjct: 179 MHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTA 235 >gi|261346381|ref|ZP_05974025.1| geranyltranstransferase [Providencia rustigianii DSM 4541] gi|282565699|gb|EFB71234.1| geranyltranstransferase [Providencia rustigianii DSM 4541] Length = 305 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 6/240 (2%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 M+ ++ ++ LL + + L A++Y LLGGK++R FL Sbjct: 1 MSEQHQDAFAHQQRQAHDRVNQYLLNSLETLPFADLP-LAQAMKYGTLLGGKRLRPFLTY 59 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + V+ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E A++A Sbjct: 60 AVGEMLGVSQDNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAVLA 119 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176 G+ L T+AF+++SS ++ D R ++ L + GL GM GGQ LD + + +D Sbjct: 120 GDALQTFAFQLLSSAAMPEVSDKDRIAMISELAYASGLAGMCGGQALDLDAEGKRVDLAA 179 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLP 235 + I + KTGAL+ A GA A + L + +G+ FQ+ DD+LD D Sbjct: 180 LERIHQHKTGALIRAAIRLGAYAAGEKGRQSIAILDQYANAIGLAFQVQDDILDVIGDSE 239 >gi|298372651|ref|ZP_06982641.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058] gi|298275555|gb|EFI17106.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058] Length = 318 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 18/225 (8%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78 +++ + + H+ L I Y L GGK++R LV +F + T A Sbjct: 5 IENSIRRIDWHIDPVS---LYKPIEYTLDSGGKRLRPMLVAIACEMFGKSSETVENAAVA 61 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE H ++L+HDDL MD+ RR KPTVH++++ TAI++G+ +L A+E ++ + Sbjct: 62 IEIFHNFTLLHDDL--MDDSPTRRNKPTVHVKWNANTAILSGDAMLIKAYEFLAKIPEKY 119 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACES 195 + + GQ D+ E + + F + ++KT L+ + ++ Sbjct: 120 WAKVL------PVFTQTALEVCEGQQFDMDFETKDNVTIDEYFRMIRLKTAVLLACSLKT 173 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237 GAI+A AS+ ++ + G +G+ FQL DD LD L K+ Sbjct: 174 GAIIADASERDQRLIYDLGIAIGMAFQLKDDYLDTYGTFETLGKR 218 >gi|304384740|ref|ZP_07367086.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284] gi|304328934|gb|EFL96154.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284] Length = 297 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN ++ ++ I+ +L+ + H +L + Y+ GGK++R ++ Sbjct: 4 MNKEFNEFVRRSTPLINDHFAELMEKVEKH-----QPQLARMMAYSFNAGGKRVRPLILL 58 Query: 60 ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 + + L V A+E +H YSLIHDDLP+MDN +RRG+PT H Q+ E AI+ Sbjct: 59 AILEVLGEPINPDVLTVAVALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKQFGEAEAIL 118 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176 G+ LLT AF+ +++ T +++ ++ L G +GM+ GQ+ DI+ + Q Sbjct: 119 TGDALLTIAFQWLAA--TGFTAEVKATVIGDLAQAAGPEGMIAGQLQDIEGNHQRYTIEQ 176 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233 + + ++KTG ++ F ++ +A + F +N G+ FQ+ DD++D E + Sbjct: 177 LKKLHELKTGQMLIFPAKAALHIAKCETTVATAILRFVQNFGLAFQIHDDIIDVTESSVE 236 Query: 234 LPK 236 L K Sbjct: 237 LGK 239 >gi|238918407|ref|YP_002931921.1| hypothetical protein NT01EI_0448 [Edwardsiella ictaluri 93-146] gi|238867975|gb|ACR67686.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 323 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A L + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAILAARTLGYQGDHHLTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRILALMSEATNVIAEGEV-QQLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+A A +++ L+ +G LG FQL DDLL Sbjct: 155 DPDISEENYMQVIYSKTARLFEAAAQCSAILAGADPAQEQALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T] gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T] Length = 302 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 79/236 (33%), Positives = 122/236 (51%), Gaps = 9/236 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62 + +R + L +L A RL A+RYA+LGG K++R L Sbjct: 9 SFSEWTAQIQQRTEVALAGVLPDAAIA-----PHRLHEAMRYAVLGGGKRVRPLLAHAAG 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +L R+ A+E IH YSL+HDDLP MD+ +RRGKPTVH+++DE TA++AG+ Sbjct: 64 ALAGAAAEDLDRIACAVELIHAYSLVHDDLPCMDDDVLRRGKPTVHVEFDEATALLAGDA 123 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180 L T AF++++ + ++ L G +GM GGQ +D+ + + ++ + Sbjct: 124 LQTLAFQVLAERPLGTDPANQLAMLNQLAIASGSRGMAGGQAIDLASVGKRLGREELEFM 183 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL+ A GA +E RL + + +G++FQ+ DDLLD E D Sbjct: 184 HIHKTGALIRAAVLLGARAGGTLGADEHARLDHYAKVVGLLFQVVDDLLDAEADTA 239 >gi|94311552|ref|YP_584762.1| farnesyl-diphosphate synthase [Cupriavidus metallidurans CH34] gi|93355404|gb|ABF09493.1| geranyltranstransferase [Cupriavidus metallidurans CH34] Length = 294 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 75/236 (31%), Positives = 119/236 (50%), Gaps = 9/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61 + ++ R + L+ L T + T L A+RYA+LGG K++R LV Sbjct: 2 SDFATWMRAQGARTEAALEAALPSTDTIPYT-----LHEAMRYAVLGGGKRVRPLLVHAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+ Sbjct: 57 GEVVGATPEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179 L + AF +++ L R +++ L G GM GGQ +D+Q+ + + + Sbjct: 117 ALQSQAFIVLAQTPA-LAAEARLKVVAELAVASGSIGMCGGQAIDLQNVGKAMTREALEG 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +MKTGAL+ + GA+ + Q L + +G+ FQ+ DD+LD D Sbjct: 176 MHRMKTGALLRASVRMGALCGNIDQAGLVALDRYAAAVGLAFQVVDDILDVTADTA 231 >gi|323966367|gb|EGB61801.1| polyprenyl synthetase [Escherichia coli M863] gi|327251278|gb|EGE62967.1| polyprenyl synthetase family protein [Escherichia coli STEC_7v] Length = 323 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A S E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCSPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|238787578|ref|ZP_04631376.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641] gi|238724365|gb|EEQ16007.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641] Length = 323 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ +R +++ N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMAAATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A++A AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLADASEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|237706062|ref|ZP_04536543.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia sp. 3_2_53FAA] gi|226899102|gb|EEH85361.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia sp. 3_2_53FAA] Length = 340 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 19 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 78 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 79 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 136 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 137 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 190 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 191 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 236 >gi|239827501|ref|YP_002950125.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. WCH70] gi|239807794|gb|ACS24859.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. WCH70] Length = 320 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 8/229 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 KL+ ++T L + + +Q+ ++ +A+ GGK+IR V A Sbjct: 2 KLKAMYSFLNTDLRAVEKELEKTVQSDYSQLSEAALHLLQAGGKRIRPVFVLLAAKFGTY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + V A+E IH SL+HDD+ +D+ +RRG+ T+ +++ A+ G+ + + Sbjct: 62 DIERIKHVAVALELIHMASLVHDDV--IDDAELRRGRKTIKAKWNNRFAMYTGDYMFARS 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E ++ + L I + ++ + Q+ D + K KT Sbjct: 120 LEQMARLENPLAHRILANTIVEVCRGEI------EQIKDKYRFDQNLRCYLRRIKRKTAL 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ +C+ GAI A+A+++ ERL FG +G+ FQ+ DD+LD K Sbjct: 174 LIAASCQLGAIAANAAKDVAERLYLFGYYVGMSFQITDDILDFTGTEAK 222 >gi|162448166|ref|YP_001621298.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A] gi|161986273|gb|ABX81922.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A] Length = 278 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 121/217 (55%), Gaps = 9/217 (4%) Query: 26 QTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 + ++++T +L +A+ YALLGG K+IR L V+ + A+E IH Sbjct: 7 RLKAYIETLPESKLKAAMAYALLGGGKRIRPMLGMTLLESKGVDPTPYIEAFLAVEMIHT 66 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 YSLIHDDLP+MD+ +RRGKPTVHI +DE AI+AG+ LLT +F +++ L + Sbjct: 67 YSLIHDDLPAMDDDTLRRGKPTVHIAFDEAIAILAGDALLTDSFRLVTQ-NKYLSTLQKV 125 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA 202 +++ ++ G GM+ GQ+ DI+ E + + ++ ++KT L+ + ++ Sbjct: 126 EIIDIISSKAGSTGMVFGQIKDIESEDKMVTIEDLNLMYELKTANLIQASLMIAGVI--L 183 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 S ++ + G +G+IFQ+ DD+L+ E+ K Sbjct: 184 SDHDIKSYEDLGYYIGLIFQIQDDILEYTLSPEEFGK 220 >gi|21232031|ref|NP_637948.1| farnesyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767842|ref|YP_242604.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|21113769|gb|AAM41872.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573174|gb|AAY48584.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas campestris pv. campestris str. 8004] Length = 291 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 9/233 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 M+ L + R + LD L A RL +A+R+A+LGG K++R LV Sbjct: 1 MSAAL---FERWVARTERQLDACLPSPALA-----PQRLHAAMRHAVLGGGKRMRPLLVY 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +LF + A+E IH YSL+HDDLP+MD+ +RRG PTVHI +DE TAI+A Sbjct: 53 ASGALFGAEEGSLDAPAVAVELIHAYSLVHDDLPAMDDDALRRGHPTVHIAFDEATAILA 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L AFE+++ + L+ +D + + Sbjct: 113 GDALQARAFELLAEAPADAALRVGWLQSLASAAGAAGMCGGQALDIDATGQVQALEALQR 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + +KTGAL+ A G + A +++RL F + LG+ FQ+ DD+LD E Sbjct: 173 MHALKTGALIRAAVRMGVLTGGAGIADQQRLDAFADALGLAFQVRDDILDVES 225 >gi|116872794|ref|YP_849575.1| geranyltranstransferase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741672|emb|CAK20796.1| geranyltranstransferase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 293 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 84/228 (36%), Positives = 128/228 (56%), Gaps = 6/228 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 +LD+ L + + +L ++ Y++ GGK+IR LV N + + Sbjct: 7 FLAHYKKVLDESLYKEIKKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNKDPM 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 L+ A+E IH YSLIHDDLP+MD+ RRGK T H + + TAI+AG+ LLT AF I Sbjct: 65 IGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKKTNHKVFGDATAILAGDALLTLAFSI 124 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188 ++ + L R L+ ++++ G +GM+GGQ DI+ E + ++ I KTG L Sbjct: 125 VAEDEN-LSFETRIALINQISYSSGAEGMVGGQQADIEAENKQVTLEELSSIHARKTGEL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + FA S A +A A+ + +RLR F EN+G+ FQ++DD+LD D K Sbjct: 184 LIFAVTSAAKIAEANSEQTKRLRIFAENIGVGFQISDDILDVIGDETK 231 >gi|269137746|ref|YP_003294446.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202] gi|267983406|gb|ACY83235.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202] gi|304557803|gb|ADM40467.1| Octaprenyl-diphosphate synthase [Edwardsiella tarda FL6-60] Length = 323 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALGYQGDRHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRILALMSEATNVIAEGEV-QQLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+A A +++ L+ +G LG FQL DDLL Sbjct: 155 DPDISEENYMQVIYSKTARLFEAAAQCSAILAGADTAQEQALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|326790848|ref|YP_004308669.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427] gi|326541612|gb|ADZ83471.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427] Length = 291 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 81/238 (34%), Positives = 122/238 (51%), Gaps = 12/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + +K++ L+ + A + L A+ Y+LL GGK+IR L+ Sbjct: 1 MAKTFSDYAKQVSEKLEHVFPTIAGPFEN-----LYKAMNYSLLAGGKRIRPVLMQLAYE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 IE IH YSLIHDDLP+MD+ RRGK T H + E TAI+AG+ L Sbjct: 56 AVGGKAE-IDAYLCGIEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVFGEATAILAGDAL 114 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 L AF ++ + + + + L+ G GM+GGQ+LD++ E ID+ + +I Sbjct: 115 LNDAFCLMLEDALKSDSMEKVRAIHVLSMASGSAGMIGGQILDMESENKAIDQDTLDLIH 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 KTGAL+ A + GAI+ S E L +G+ +G +FQ+ DD+LD E+L K Sbjct: 175 LNKTGALISAATKMGAILGGGSPREVSLLEAYGKYIGKVFQIVDDILDQTSTIEELGK 232 >gi|227537499|ref|ZP_03967548.1| possible geranyltranstransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227242636|gb|EEI92651.1| possible geranyltranstransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 325 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 13/210 (6%) Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYS 86 S + Q + IRY L L GK++R L A LF + + AIE H +S Sbjct: 17 SAVFPQEPANMYDPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAALAIEYFHNFS 76 Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146 LIHDD+ MD +RRG+ TVH ++++ AI++G+GLL A+E ++ + ++ + Sbjct: 77 LIHDDI--MDKAPLRRGQLTVHEKWNDSVAILSGDGLLVKAYEQVAKCPKENLLDLLT-- 132 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHAS 203 T N + GQ LD+ E +D E + + ++KT L+ A GAI+A AS Sbjct: 133 ----TFNKVATEVCEGQQLDMDFESLDQVTEDEYLHMIRLKTSVLLGGALRMGAIIAQAS 188 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++E + FG N+GI FQL DD+LD D Sbjct: 189 LEQQEFIYDFGVNVGIAFQLQDDILDVYGD 218 >gi|145220349|ref|YP_001131058.1| geranyltranstransferase [Prosthecochloris vibrioformis DSM 265] gi|145206513|gb|ABP37556.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Chlorobium phaeovibrioides DSM 265] Length = 335 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 19/236 (8%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63 + K +E RI+ L T + L + RY L G GK+IR FL + Sbjct: 13 VEKKYREYHTRINDALGQCFSAT-------TPETLYAPARYILEGKGKRIRPFLTLLASE 65 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + ++V A+E +H ++L+HDD+ MD +R +PTVH ++D+ AI++G+ + Sbjct: 66 AVSGSSDNTMKVALAVEVLHNFTLMHDDI--MDEADLRHNRPTVHRKWDDNVAILSGDMM 123 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMI 180 + Y++E+ ++ L N + GQ LD++ E + + Sbjct: 124 IAYSYELALQAESHR------HCELIHILNHANITICEGQALDMELEDKTDATIADYLDM 177 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTG L+ A E+G + A A++ + L FGE +G FQ+ DD LD + K Sbjct: 178 ISKKTGRLISAALEAGGVAADATKEQLMSLVTFGEKIGRAFQIQDDYLDIMAENGK 233 >gi|37528362|ref|NP_931707.1| octaprenyl diphosphate synthase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787800|emb|CAE16915.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 323 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 14/222 (6%) Query: 21 DDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGA 77 DD+ + + ++D L++ + Y ++ GGK+IR + + + + V A Sbjct: 12 DDMAAVNETILSQLNSDVTLINQLGYYIISGGGKRIRPIIAILASRVLGYQGDKHITVAA 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F+++++ + Sbjct: 72 LIEFIHTATLLHDDV--VDESDMRRGKATANAMFGNAASVLVGDFIYTRSFQMMTALNS- 128 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 +R ++S N+ +G + Q+++ D I E + KT L A S A Sbjct: 129 ----MRVLKLMSEATNVIAEGEVL-QLMNCNDPNISEDDYMRVIYSKTARLFEVAAHSSA 183 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 I+++A+ ++ L+ +G LG FQL DDLLD D L K Sbjct: 184 ILSNATPEQEMALQNYGRYLGTAFQLIDDLLDYNADSDTLGK 225 >gi|238783532|ref|ZP_04627554.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970] gi|238715587|gb|EEQ07577.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970] Length = 323 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALHYQGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A++A AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLADASEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|53804815|ref|YP_113317.1| geranyltranstransferase [Methylococcus capsulatus str. Bath] gi|53758576|gb|AAU92867.1| geranyltranstransferase [Methylococcus capsulatus str. Bath] Length = 300 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 78/235 (33%), Positives = 122/235 (51%), Gaps = 10/235 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62 L ++ + +R++ LD L + +RL A+RY++LGG K++R L Sbjct: 6 SLSDFMRSSQERVERALDARLPAAD-----RMPERLHQAMRYSVLGGGKRMRPLLTYATG 60 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 V A+E IH YSLIHDDLP+MD+ +RRGKPT H YDE TAI+AG+G Sbjct: 61 QTIGVAADLLDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKPTCHKAYDEATAILAGDG 120 Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179 L AF +++ P + R ++ +L G GM+GGQ +D+ + +D + Sbjct: 121 LQALAFHVLAQDPSIAVPAENRIAMIETLAKASGPAGMVGGQAIDLASVGKKLDLPGLEN 180 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTGAL+ + + + +RL + + +G+ FQ+ DD+LD E D Sbjct: 181 MHIRKTGALIRASVRLACLARPGLPAEQFDRLDHYAKCIGLAFQIQDDILDEESD 235 >gi|332967870|gb|EGK06966.1| octaprenyl-diphosphate synthase [Kingella kingae ATCC 23330] Length = 324 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L + + A +E IH +L+HDD+ +D +RRG+ T Sbjct: 44 AGGKRLRPILTILSGKCLGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTA 101 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + A++ G+ L T AF+++ + ++ +++ NI +G + Q+++I Sbjct: 102 NNLFGNAAAVLVGDFLYTRAFQLMVGSGS-----LKILEVMADATNIIAEGEVM-QLMNI 155 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + I E Q + + KT L A + GAI+A A+ +++ L+ FG ++G FQ+ DD+ Sbjct: 156 GNVDITEAQYLQVIQYKTAKLFEAAAQVGAILAGATAEQEQALKDFGMHMGTAFQIIDDV 215 Query: 228 LDCEE 232 LD Sbjct: 216 LDYSG 220 >gi|119897305|ref|YP_932518.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72] gi|119669718|emb|CAL93631.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72] Length = 341 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 18/235 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + + + +D ++ L ++ + S GGK++R LV A Sbjct: 25 LFAPIAADMQAVDALIRKALYSDVVLIRQVAEYIINS-------GGKRLRPALVLFSAGA 77 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 R+ A +E IH +L+HDD+ +D +RRG T + + +++ G+ L Sbjct: 78 VGYRGTQHHRLAAVVEFIHTSTLLHDDV--VDESELRRGNKTANALFGNAASVLVGDFLY 135 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 T AF+++ D++R +L+ NI +G + Q+L+ + ++ + + K Sbjct: 136 TRAFQMMVE-----VDSMRVMQILADATNIIAEGEVL-QLLNCHNADVEVEDYLRVIRYK 189 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 T L A GA++ A +E + FG +LG FQL DD+LD E D K Sbjct: 190 TAKLFEAASRLGAVLGGADPALEESMAAFGMHLGTAFQLIDDVLDYSADEADTGK 244 >gi|121593262|ref|YP_985158.1| dimethylallyltranstransferase [Acidovorax sp. JS42] gi|120605342|gb|ABM41082.1| Dimethylallyltranstransferase [Acidovorax sp. JS42] Length = 327 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 111/227 (48%), Gaps = 15/227 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 + + ++ + +D ++ L Q++ + ++SA GGK++R L+ Sbjct: 13 ALIADDMREVDKVIAARL-QSSVPLVGSVAQYIISA------GGKRLRPALLLLTCGALE 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A +E IH +L+HDD+ +D +RRG+PT + + +++ G+ L T Sbjct: 66 YKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANETFGNPASVLVGDFLHTR 123 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 +F+++ + +R +L+ N+ +G + Q+++ D +DE + + KT Sbjct: 124 SFQMMVEAGS-----MRILQVLADATNVIAEGEV-QQLMNTHDASLDEAGYLHVIRSKTA 177 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L + AI+A ++ + ++ +G+ LG FQ+ DD+LD + D Sbjct: 178 KLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVLDYDGD 224 >gi|160889241|ref|ZP_02070244.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492] gi|156861248|gb|EDO54679.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492] Length = 346 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 19/229 (8%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69 E +RI++ + +L T+ L + + Y L +GGK+IR L+ +L+ + Sbjct: 28 ELLERINSHIAEL-------QFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDI 80 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 IE H Y+L+HDDL MD RRGK TVH +D+ AI++G+ +L A++ Sbjct: 81 TRIFNPATGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQ 138 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTG 186 ++ + + ++ + GQ LD++ E + + + ++KT Sbjct: 139 FMAQCPVEHLKEV------MDIFSLTALEICEGQQLDMEFEHRKDVKAEEYLEMIRLKTS 192 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + + GA++ AS + E+L FG NLG+ FQL DD LD D Sbjct: 193 VLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDVYGDAA 241 >gi|163858994|ref|YP_001633292.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM 12804] gi|163262722|emb|CAP45025.1| putative octaprenyl-diphosphate synthase [Bordetella petrii] Length = 308 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 8/186 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R +V A + A +E IH +L+HDD+ +D +RRG+ T Sbjct: 29 AGGKRMRPAMVLMMARALGYQGEHHRLLAAVVEFIHTATLLHDDV--VDESDLRRGRETA 86 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + +R +LS I +G + Q+L++ Sbjct: 87 NAMFGNAASVLVGDYLYSRSFEMMVEAGS-----MRIMQILSEATTIIAEGEVL-QLLNV 140 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D + + + + + KT L A + GA++A AS ++E +G ++G FQL DD+ Sbjct: 141 HDPDVSQARYLQVVRYKTAKLFEAAAQVGAVLAGASPEQEEAAAAYGRHIGTAFQLVDDV 200 Query: 228 LDCEED 233 LD D Sbjct: 201 LDYSGD 206 >gi|260061041|ref|YP_003194121.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501] gi|88785173|gb|EAR16342.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501] Length = 325 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 73/226 (32%), Positives = 111/226 (49%), Gaps = 15/226 (6%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69 E+ ++ DD L + +Q L I Y + LGGK++R LV A LF Sbjct: 3 ESIEQYRQSFDDYLQKI---LQFGEPAGLYEPIGYIMDLGGKRMRPVLVLLSAELFGAPA 59 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 AL AA+E H +SL+HDD+ MD +RRG+PTVH ++D TAI++G+ +L A++ Sbjct: 60 ENALPAAAAVEIFHNFSLVHDDI--MDAAPLRRGRPTVHRKWDPNTAILSGDAMLIRAYQ 117 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTG 186 + +L L+ + + GQ D+ E D+ + + + KT Sbjct: 118 QLDGYPPELFQP------LTRLFSRTALEVCEGQQYDMDFESRDDVGIPEYLRMIEFKTA 171 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ A + GAI+ A E+E + FG LG+ FQL DD LD Sbjct: 172 VLLGCALQMGAIIGGAEVAEQEAVYDFGIRLGLAFQLQDDYLDVFG 217 >gi|317178721|dbj|BAJ56509.1| geranyltranstransferase [Helicobacter pylori F30] Length = 303 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 15/231 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67 +R ++ L+ L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+ Sbjct: 70 QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S+ + L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT Sbjct: 130 FELLSN--SLLESHIIVELIKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKT 187 Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238 >gi|189463880|ref|ZP_03012665.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM 17393] gi|189438453|gb|EDV07438.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM 17393] Length = 324 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 16/222 (7%) Query: 22 DLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LL + SH+ T+ L + + Y L +GGK+IR L+ +L+ + Sbjct: 6 ELLEKINSHITDLQFTRTPKGLYAPVEYVLSMGGKRIRPVLMLMAYNLYQEDVTRIYAPA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A++ ++ Sbjct: 66 IGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLILAYQFMAECSP 123 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFAC 193 + L+ + GQ +D++ E ++ + + ++KT L+ + Sbjct: 124 SFLKEVMDLFSLT------ALEICEGQQMDMEFEQRNDVAAEEYLEMIRLKTAVLLAASL 177 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 GA + AS + +RL FG +G+ FQL DDLLD ++ Sbjct: 178 RIGARLGGASVEDADRLYDFGMQIGVAFQLKDDLLDVYGNVK 219 >gi|11499867|ref|NP_071111.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) [Archaeoglobus fulgidus DSM 4304] gi|2648237|gb|AAB88971.1| bifunctional short chain isoprenyl diphosphate synthase (idsA) {Methanobacterium thermoautotrophicum [Archaeoglobus fulgidus DSM 4304] Length = 326 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 17/236 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L ++ + ++ I+ +++LL + + L A R+ + GGK++R + Sbjct: 11 LKEEIAKRAEIINKAIEELLPE-------REPIGLYKAARHLIKAGGKRLRPVISLLAVE 63 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 ++ + +IE IH ++L+HDD+ MD +RRG PTVH Y E TAI+AG+ L Sbjct: 64 ALGKDYRKIIPAAVSIETIHNFTLVHDDI--MDRDEMRRGVPTVHRVYGEATAILAGDTL 121 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMI 180 AF++++ + + ++ MLS + GQ D+ E + + Sbjct: 122 FAEAFKLLTKCDVESEGIRKATEMLSDV----CIKICEGQYYDMSFEKKESVSEEEYLRM 177 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++KTG L+ + A++ S+ + L +G GI FQ+ DDLLD E+ K Sbjct: 178 VELKTGVLIAASAALPAVLFGESEEIVKALWDYGVLSGIGFQIQDDLLDLTEETGK 233 >gi|254427749|ref|ZP_05041456.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881] gi|196193918|gb|EDX88877.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881] Length = 323 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 15/226 (6%) Query: 14 KRIDTILDD---LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69 K I ++DD + Q SH + + Y + GGK++R + CA Sbjct: 4 KAIYAVVDDDFEAVNQFISHHLDSNVPLIREVGDYIIQSGGKRLRPLIAILCARAAGYQG 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + V A IE +H +L+HDD+ +D +RRG+PTV+ + +++ G+ L++ A + Sbjct: 64 DRHVDVAAIIEFLHTATLLHDDV--VDESNLRRGRPTVNAVWGNAASVLVGDFLISRALQ 121 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++ + + + R + S + N +G + Q+++++D E + KT + Sbjct: 122 LMVALR-----HPRLLDIFSQSTNTISEGEVL-QLINVRDPNTSEENYMRVIHHKTAKMF 175 Query: 190 CFACESGAIMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCEED 233 A E+GA++ A + + + +G +LGI FQL DD+LD + D Sbjct: 176 ESAAETGAVL-GADEVSDHVDAFATYGRHLGIAFQLIDDVLDYQGD 220 >gi|156935711|ref|YP_001439627.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894] gi|156533965|gb|ABU78791.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894] Length = 323 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 27 SDVQLINQLGYYIVSGGGKRIRPMIAVLAARALGYEGKAHVTIAALIEFIHTATLLHDDV 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 87 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + I+A AS+ ++ L+ Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEESYMRVIYSKTARLFEAAAQCSGILAGASEAQERALQD 198 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219 >gi|330994690|ref|ZP_08318613.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1] gi|329758331|gb|EGG74852.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1] Length = 311 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 151/238 (63%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 L + + + I++++D LL + RL+ A+RYA L GGK++R +LV E AS Sbjct: 20 LRASMSARATAIESMIDRLLPRVEG-----GEARLIDAMRYATLGGGKRLRGYLVAEVAS 74 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LFNV A RV A++E +H YSL+HDDLP+MD+ +RRG+P+ H ++DE TAI+AG+ L Sbjct: 75 LFNVAAEGADRVAASVEMLHAYSLVHDDLPAMDDDDLRRGQPSTHRKFDEATAILAGDAL 134 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 T AF+I+++P T +R L+ +L G GM+GGQM+D++ E + +V + Sbjct: 135 QTMAFDILANPLTHAGAEVRINLVRALADASGAAGMVGGQMIDMEGEGRALSLEEVARLH 194 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 +KTG L+ ++ E+GAI+ A ++ + R+ +G +LG FQ+ADD+LD E+L K Sbjct: 195 ALKTGCLIRYSAEAGAILGQAGEDARLRISAYGRDLGAAFQIADDVLDATASAEELGK 252 >gi|307293392|ref|ZP_07573238.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1] gi|306881458|gb|EFN12674.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1] Length = 302 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 98/232 (42%), Positives = 145/232 (62%), Gaps = 8/232 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 + S+ ++ +D + D LL + RL A+R+A + GGK++R LV + Sbjct: 11 VASRAAALAEDVDRLFDTLLA-----VPDDPRRRLYEAMRHAAMGGGKRLRPLLVQAASD 65 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LFN++ +ALRVG A+ECIH YSL+HDDLP+MD+ +RRGKPTVH +DE TAI+AG+ L Sbjct: 66 LFNISRDSALRVGVAVECIHVYSLVHDDLPAMDDDDMRRGKPTVHKAFDEATAILAGDCL 125 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 AFEI++ +T +R +L+ +L G GM GGQM+D++ E D V +Q Sbjct: 126 HDLAFEILADEETHPDPFVRVELVKALAVASGTSGMAGGQMMDLEAEKASFDLPTVTRLQ 185 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++KTGAL+ F ++ AIMA + + RL + ++G+ FQ+ADDLLD E D Sbjct: 186 QLKTGALIAFCVDAAAIMARIPPDARPRLHGYARDIGLAFQIADDLLDVEGD 237 >gi|254038351|ref|ZP_04872409.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia sp. 1_1_43] gi|226839975|gb|EEH71996.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia sp. 1_1_43] Length = 340 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 19 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 78 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 79 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 136 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 137 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 190 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 191 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 236 >gi|295097675|emb|CBK86765.1| Geranylgeranyl pyrophosphate synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 323 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 113/226 (50%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 QGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A S+ +++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCSEAQEKGLQDYGRYLGTAFQLIDDLLDYSAD 219 >gi|260912975|ref|ZP_05919460.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325] gi|260632965|gb|EEX51131.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325] Length = 358 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + IE IH +L+HDD+ +D +RRG PT + Sbjct: 78 GGKRIRPMIAILAARALGYTSDEPITCATFIEFIHTATLLHDDV--VDESELRRGNPTAN 135 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ + +R ++S N+ +G + Q++++ Sbjct: 136 AEFGNAASVLVGDFIYTRAFQLMTQLNS-----LRILKVMSDATNVIAEGEV-QQLMNVN 189 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A AI+A A+ +++ L+ +G LG FQL DD+L Sbjct: 190 DPNTTEENYMQVIYGKTARLFEAATHCSAILAKATAAQEKALQDYGRYLGTAFQLVDDIL 249 Query: 229 DCEE 232 D Sbjct: 250 DYSS 253 >gi|189184004|ref|YP_001937789.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda] gi|189180775|dbj|BAG40555.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda] Length = 338 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 65/227 (28%), Positives = 115/227 (50%), Gaps = 8/227 (3%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65 S + + SK +D + ++ + + + Y GGK+IR L + LF Sbjct: 11 SFIDKLSKFLDKDMSEVNNVILDCISSSQEQLIYEVGTYFFNAGGKRIRPMLTIIISKLF 70 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 N + L+ + AA+E IH +L+HDD+ +D +RR PTVH+++D T+I+ G+ L + Sbjct: 71 NYHGLSHYYLAAAVELIHSATLLHDDV--VDESKMRRSHPTVHLKWDTKTSILIGDFLFS 128 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 +F+++ ++IR+ SL+ N + G + + I E + F + + KT Sbjct: 129 QSFKLMIK-----SNSIRALKSFSLSFNTIITGEVKQLTQLHNQKIITEDEYFRVIQAKT 183 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L +CE AI+++ S ++ FG LG+IFQ+ DD+LD Sbjct: 184 AELFGTSCEIAAIISNQSAPTCLLVKTFGIKLGLIFQIVDDILDYFG 230 >gi|237750142|ref|ZP_04580622.1| geranyltranstransferase [Helicobacter bilis ATCC 43879] gi|229374329|gb|EEO24720.1| geranyltranstransferase [Helicobacter bilis ATCC 43879] Length = 293 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 76/231 (32%), Positives = 125/231 (54%), Gaps = 9/231 (3%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLF 65 S ++ ++ L D + + H ++ + L GGK+ R L++ + Sbjct: 2 SFFKQTCNEFESYLHDNQPEISGFHP--HFEKAFWEM--VLNGGKRFRPNLLLSVVCAEA 57 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 A V +IEC+H YSLIHDDLP+MDN +RR PT+H +YDEV+AI+ G+GL T Sbjct: 58 KEQAKNAFDVCLSIECLHTYSLIHDDLPAMDNAALRRNHPTLHCKYDEVSAILIGDGLNT 117 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKM 183 Y+F ++++ ++ ++L+ L N G+ GM+ GQ LD E ++ I Sbjct: 118 YSFYLLANA--HFAPSVVAELISCLAENGGIGGMVLGQALDCYFEHTTLPLDKLQFIHTH 175 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 KT L+ + + GAI+A+ S + ++ L FG LG+ FQ+ DD++D +D Sbjct: 176 KTAKLIAASLKMGAIIANLSLDMQKFLYDFGLVLGLYFQIRDDIIDSIQDE 226 >gi|260775534|ref|ZP_05884431.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260608715|gb|EEX34880.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 323 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPLLAVLSARALGYQGQAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S NI +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNIIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A + L+ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPSEVETALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|159905289|ref|YP_001548951.1| polyprenyl synthetase [Methanococcus maripaludis C6] gi|159886782|gb|ABX01719.1| Polyprenyl synthetase [Methanococcus maripaludis C6] Length = 317 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 19/229 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 +E +ID+ L + + + +L A ++ LL GGK++R +L L + Sbjct: 5 REILSKIDSELKKYVEK---------DTKLYGASKHLLLAGGKRVRPYLSIITYLLKKDD 55 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L ++E IH Y+L+HDD+ MDN RRG PTVH Y E AI+AG+ L AF Sbjct: 56 ITEILAPALSVELIHNYTLVHDDI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAF 113 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186 E +S+ + K + +++ + + GQ D++ E F + F + KTG Sbjct: 114 EALSNIEDSNKAHEVLKVL-----SKACVEVCEGQTDDMEFEERFPTLYEYFDMISKKTG 168 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 AL+ E GA+MA + E+E L + + +G+ FQ+ DD+LD D Sbjct: 169 ALIVAPVEIGAVMADCTPEEREALCNYAKRIGMTFQIQDDVLDLIGDQK 217 >gi|301644900|ref|ZP_07244870.1| polyprenyl synthetase [Escherichia coli MS 146-1] gi|301076794|gb|EFK91600.1| polyprenyl synthetase [Escherichia coli MS 146-1] Length = 320 Score = 191 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|208809557|ref|ZP_03251894.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4206] gi|208729358|gb|EDZ78959.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4206] Length = 324 Score = 191 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 28 SDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV 87 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 88 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 140 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + I+A + E++ L+ Sbjct: 141 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQD 199 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 200 YGRYLGTAFQLIDDLLDYNAD 220 >gi|90415578|ref|ZP_01223512.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207] gi|90332901|gb|EAS48071.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207] Length = 295 Score = 191 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 82/234 (35%), Positives = 130/234 (55%), Gaps = 10/234 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + S ++D L+ +L T + L +A+RY++ GGK++R L Sbjct: 2 SSIKDIISHYSAQVDAQLEAMLP-----AATGPAEPLFAAMRYSVFNGGKRLRPALCFAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A + +V AA+E IH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+AG+ Sbjct: 57 ADAVAGSDANTAKVAAALEMIHAYSLIHDDLPAMDDDDLRRGKPTCHIQFDEATAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 GL + AF+ + ++L I +L+ +L+ G GM+ GQ +D+ ++ + + Sbjct: 117 GLQSLAFQQLCEL-SELDPTIVVELVSTLSRLGGCSGMVAGQAIDLAATGSVLELDALKV 175 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ + GA+ ASQ + L+ F +G+ FQ+ DD+LD E Sbjct: 176 MHAHKTGALIEASVLMGALATGQASQEQLGALKDFARAIGLAFQIQDDILDVES 229 >gi|26249771|ref|NP_755811.1| octaprenyl diphosphate synthase [Escherichia coli CFT073] gi|26110199|gb|AAN82385.1|AE016767_145 Octaprenyl-diphosphate synthase [Escherichia coli CFT073] Length = 323 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|193065379|ref|ZP_03046450.1| octaprenyl-diphosphate synthase [Escherichia coli E22] gi|260846000|ref|YP_003223778.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str. 12009] gi|192927020|gb|EDV81643.1| octaprenyl-diphosphate synthase [Escherichia coli E22] gi|257761147|dbj|BAI32644.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str. 12009] gi|323162879|gb|EFZ48714.1| polyprenyl synthetase family protein [Escherichia coli E128010] Length = 323 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|116491232|ref|YP_810776.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1] gi|290890777|ref|ZP_06553844.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429] gi|116091957|gb|ABJ57111.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1] gi|290479549|gb|EFD88206.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429] Length = 275 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 79/226 (34%), Positives = 120/226 (53%), Gaps = 11/226 (4%) Query: 21 DDLLLQTASHMQTQHNDR---LLSAIRYALLG-GKKIRSFLVTEC-ASLFNVNHLTALRV 75 + L + + + DR + I YAL GK++R L A+ NV + + + Sbjct: 8 NRYLPEINNDLSNYFADRDDDIFRMITYALNSTGKRLRPLLTLATFAAAGNVINDSTIEA 67 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E +H YSL+HDDLP MD+ RR + + ++ A++ G+GLLT AF+ IS+ Sbjct: 68 ATAVEFVHAYSLVHDDLPEMDDDTKRRNQSSTWKKFGVGNAVLVGDGLLTEAFKKISNL- 126 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFAC 193 L ++IR +L+ +L G M+ GQ D QD+ + I MKTGALM +A Sbjct: 127 -SLPESIRLRLIYNLALAAGPDNMVRGQQYDLFSQDKVESIDDLEFIHLMKTGALMTYAA 185 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237 +G I+A S ++ L +G NLGI FQ+ DDL D ++D KK Sbjct: 186 TAGGILAGLSDDKLRALNIYGANLGIAFQIKDDLRDIKQDEEENKK 231 >gi|284040578|ref|YP_003390508.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74] gi|283819871|gb|ADB41709.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74] Length = 323 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 64/221 (28%), Positives = 112/221 (50%), Gaps = 12/221 (5%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78 +D L + S Q+ L + IRY + LGGK++R L A LF + A+R Sbjct: 7 IDALQQELQSIQYGQNPPELYNPIRYIMSLGGKRMRPLLTLMGAYLFTDDWRKAVRPALG 66 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E H ++L+HDD+ MD +RRG+PTVH +++ AI++G+ +L A++++ + + Sbjct: 67 VEVFHNFTLMHDDI--MDQAPLRRGQPTVHEKWNGNIAILSGDVMLVNAYQLMLNVEADK 124 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACES 195 ++ + + GQ +D+ E + E + + ++KT L+ ++ E Sbjct: 125 LAVALARFSRTAAE------VCEGQQMDMNFETRWDVSEAEYIDMIRLKTSVLLGYSLEL 178 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 G ++ A + L G N+G+ FQL DDLLD D K Sbjct: 179 GGLIGGADEETNLHLYEGGMNIGVGFQLKDDLLDVYGDPAK 219 >gi|84624779|ref|YP_452151.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188577762|ref|YP_001914691.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|84368719|dbj|BAE69877.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522214|gb|ACD60159.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 291 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 113/212 (53%), Gaps = 1/212 (0%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80 + L+ T RL +A+R+A+LGG K++R LV +LF A+E Sbjct: 14 ERNLEAGLPSATCAPHRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVE 73 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ + Sbjct: 74 LIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAAASASAEL 133 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 + L+ +D + + + +KTGAL+ + GA+ Sbjct: 134 RVGWMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQRMHALKTGALIRASVHMGALTG 193 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A+ +++RL F + LG+ FQ+ DD+LD E Sbjct: 194 GAATADQQRLDEFADALGLAFQVRDDILDVES 225 >gi|189499392|ref|YP_001958862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1] gi|189494833|gb|ACE03381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1] Length = 332 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59 MN + L++ ++ + + L RY L G GK+IR FL Sbjct: 1 MN--ISVTLEQVEQKYRQYHKRINDELGKCFTKDSPRSLYGPARYILDGTGKRIRPFLTL 58 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A++ A+E +H ++L+HDD+ MD +R G+PTVH+++D AI++ Sbjct: 59 LAAEAVCGSSENAIKTALAVEILHNFTLVHDDI--MDQADLRHGRPTVHVKWDSTAAILS 116 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQ 176 G+ ++ +A+E KT D L N + GQ +D++ E Sbjct: 117 GDMMIAFAYECALQTKTARHDE------LVHILNDANITICEGQAIDMELEQRQDATIAD 170 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTG L+ + E+G I+ A + E+L FG+ +G FQ+ DD LD + K Sbjct: 171 YLDMIAKKTGRLISASLEAGGIVGDADSEQIEKLMLFGDKIGRAFQVQDDYLDIMAENGK 230 >gi|251792484|ref|YP_003007210.1| geranyltranstransferase [Aggregatibacter aphrophilus NJ8700] gi|247533877|gb|ACS97123.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Aggregatibacter aphrophilus NJ8700] Length = 296 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 87/233 (37%), Positives = 126/233 (54%), Gaps = 11/233 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 LQ+ +RI++ L S L+ A++Y LLGGK+IR FLV Sbjct: 4 FSLDLQQVQQRINSFLASQFEHINS-----SPAPLVEAMKYGLLLGGKRIRPFLVYATGR 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + N AAIE IH YSLIHDDLP+MD+ +RRG T HI +DE TAI+AG+ L Sbjct: 59 ILGANLAHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHKTCHIAFDEATAILAGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 ++AFEI++ L + L+ +L+ G++GM GQ LD+ E I T++ I Sbjct: 119 QSFAFEILTDI-PDLSAQQKLALIKTLSAAAGVKGMCLGQSLDLISEQKAISLTELEHIH 177 Query: 182 KMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTGAL+ A + G I + A + ++L + +G+ FQ+ DD+LD E Sbjct: 178 LNKTGALLTAALKLGFICSPHFADEALLQQLERYATAIGLAFQVQDDILDIEG 230 >gi|134046661|ref|YP_001098146.1| dimethylallyltranstransferase [Methanococcus maripaludis C5] gi|132664286|gb|ABO35932.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Methanococcus maripaludis C5] Length = 317 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 19/229 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68 +E +ID+ L + + + +L A ++ LL GGK++R +L L + Sbjct: 5 REILSKIDSELKKYMEK---------DTKLYGASKHLLLAGGKRVRPYLSIITYLLKKDD 55 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L ++E IH Y+L+HDD+ MDN RRG PTVH Y E AI+AG+ L AF Sbjct: 56 ITEILAPALSVELIHNYTLVHDDI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAF 113 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186 E +S+ + K + +++ + + GQ D++ E F + F + KTG Sbjct: 114 EALSNIEDSKKAHEVLKVL-----SKACVEVCEGQTDDMEFEERFPTLDEYFDMISKKTG 168 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 AL+ E GA+MA+ + E++ L + + +G+ FQ+ DD+LD D Sbjct: 169 ALIVAPVEIGAVMANCTPEERKALCNYAKRIGMTFQIQDDVLDLIGDQK 217 >gi|300770896|ref|ZP_07080773.1| possible geranyltranstransferase [Sphingobacterium spiritivorum ATCC 33861] gi|300762169|gb|EFK58988.1| possible geranyltranstransferase [Sphingobacterium spiritivorum ATCC 33861] Length = 325 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 107/206 (51%), Gaps = 13/206 (6%) Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHD 90 Q + IRY L L GK++R L A LF + + AIE H +SLIHD Sbjct: 21 PQEPANMYDPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAALAIEYFHNFSLIHD 80 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 D+ MD +RRG+ TVH ++D+ AI++G+GLL A+E ++ + ++ + Sbjct: 81 DI--MDKAPLRRGQLTVHEKWDDSVAILSGDGLLVKAYEQVAKCPKENLLDLLT------ 132 Query: 151 THNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 T N + GQ LD+ E + E Q + ++KT L+ A GAI+ AS ++ Sbjct: 133 TFNKVATEVCEGQQLDMDFESLNQVTEAQYLHMIRLKTSVLLGGALRMGAIIGQASVEQQ 192 Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233 E + FG N+GI FQL DD+LD D Sbjct: 193 ELIYDFGVNVGIAFQLQDDILDVYGD 218 >gi|317009586|gb|ADU80166.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Helicobacter pylori India7] Length = 303 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 15/231 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV----- 67 +R ++ L+ L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSN 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+ Sbjct: 70 QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S+ + L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT Sbjct: 130 FELLSN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKT 187 Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + G +++ E + L+ FG G+ FQ+ DD++D +D Sbjct: 188 AKLISASLMMGLVVSGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEK 238 >gi|329574366|gb|EGG55938.1| geranyltranstransferase [Enterococcus faecalis TX1467] Length = 286 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 88/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G I+A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGILANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|170723659|ref|YP_001751347.1| polyprenyl synthetase [Pseudomonas putida W619] gi|169761662|gb|ACA74978.1| Polyprenyl synthetase [Pseudomonas putida W619] Length = 322 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 8/186 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS + +G + Q+ + Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A +A A+ ++E LR FG++LG+ FQL DDL Sbjct: 154 RDASTSEEVYMEVIRGKTAMLFEASTHSAAALAGATDEQREALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEED 233 LD + D Sbjct: 214 LDYKGD 219 >gi|91212610|ref|YP_542596.1| octaprenyl diphosphate synthase [Escherichia coli UTI89] gi|110643427|ref|YP_671157.1| octaprenyl diphosphate synthase [Escherichia coli 536] gi|117625480|ref|YP_858803.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1] gi|191174477|ref|ZP_03035977.1| octaprenyl-diphosphate synthase [Escherichia coli F11] gi|218560257|ref|YP_002393170.1| octaprenyl diphosphate synthase [Escherichia coli S88] gi|218691477|ref|YP_002399689.1| octaprenyl diphosphate synthase [Escherichia coli ED1a] gi|227887908|ref|ZP_04005713.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972] gi|300980004|ref|ZP_07174826.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|300990877|ref|ZP_07179365.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|301047968|ref|ZP_07195012.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|331659474|ref|ZP_08360416.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA206] gi|91074184|gb|ABE09065.1| octaprenyl diphosphate synthase [Escherichia coli UTI89] gi|110345019|gb|ABG71256.1| octaprenyl-diphosphate synthase [Escherichia coli 536] gi|115514604|gb|ABJ02679.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1] gi|190905232|gb|EDV64871.1| octaprenyl-diphosphate synthase [Escherichia coli F11] gi|218367026|emb|CAR04797.1| octaprenyl diphosphate synthase [Escherichia coli S88] gi|218429041|emb|CAR09987.2| octaprenyl diphosphate synthase [Escherichia coli ED1a] gi|227835304|gb|EEJ45770.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972] gi|294490790|gb|ADE89546.1| octaprenyl-diphosphate synthase [Escherichia coli IHE3034] gi|300300164|gb|EFJ56549.1| polyprenyl synthetase [Escherichia coli MS 185-1] gi|300307867|gb|EFJ62387.1| polyprenyl synthetase [Escherichia coli MS 200-1] gi|300407044|gb|EFJ90582.1| polyprenyl synthetase [Escherichia coli MS 45-1] gi|307555280|gb|ADN48055.1| octaprenyl-diphosphate synthase [Escherichia coli ABU 83972] gi|307625214|gb|ADN69518.1| octaprenyl diphosphate synthase [Escherichia coli UM146] gi|315288960|gb|EFU48358.1| polyprenyl synthetase [Escherichia coli MS 110-3] gi|315294881|gb|EFU54220.1| polyprenyl synthetase [Escherichia coli MS 153-1] gi|315297896|gb|EFU57166.1| polyprenyl synthetase [Escherichia coli MS 16-3] gi|323951294|gb|EGB47169.1| polyprenyl synthetase [Escherichia coli H252] gi|323957666|gb|EGB53380.1| polyprenyl synthetase [Escherichia coli H263] gi|324008745|gb|EGB77964.1| polyprenyl synthetase [Escherichia coli MS 57-2] gi|324012137|gb|EGB81356.1| polyprenyl synthetase [Escherichia coli MS 60-1] gi|331054056|gb|EGI26085.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA206] Length = 323 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|152991761|ref|YP_001357482.1| geranyltranstransferase [Sulfurovum sp. NBC37-1] gi|151423622|dbj|BAF71125.1| geranyltranstransferase [Sulfurovum sp. NBC37-1] Length = 284 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 74/229 (32%), Positives = 132/229 (57%), Gaps = 12/229 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTA 72 +R +T L + L + + + + L + ++ GGK+ R L+ + + +A Sbjct: 2 QRFETYLSENLPE-VTSFHPVYEEALGAMLQ---AGGKRFRPMLLLSIVDTYEPMLYDSA 57 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 L V A+E H YSLIHDDLP+MD+ +RRG T+H ++DEVTAI+AG+ L + AF +I+ Sbjct: 58 LPVALALEMFHTYSLIHDDLPAMDDADLRRGHQTLHKRFDEVTAILAGDALNSDAFYLIA 117 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 K L+++++ +L+ L + G +GM+ GQ +D E + +V ++ KT L+ Sbjct: 118 --KAPLREDVKIKLVELLARDGGSRGMVLGQAIDCYFENRPLTIDEVKVLHTNKTAKLIA 175 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 + + GA++ + + ++ L FG +LG++FQ+ DD++D EE+ K Sbjct: 176 VSLQMGAVIVRLAPDVQKALYDFGIDLGLLFQIQDDIIDETQTEEEAGK 224 >gi|15803727|ref|NP_289761.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 EDL933] gi|15833320|ref|NP_312093.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. Sakai] gi|168751593|ref|ZP_02776615.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4113] gi|168754169|ref|ZP_02779176.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4401] gi|168765367|ref|ZP_02790374.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4501] gi|168769043|ref|ZP_02794050.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4486] gi|168778214|ref|ZP_02803221.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4196] gi|168781331|ref|ZP_02806338.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4076] gi|168786073|ref|ZP_02811080.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC869] gi|168800901|ref|ZP_02825908.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC508] gi|195940043|ref|ZP_03085425.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. EC4024] gi|208813351|ref|ZP_03254680.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4045] gi|208818474|ref|ZP_03258794.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4042] gi|209396313|ref|YP_002272657.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4115] gi|217327318|ref|ZP_03443401.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. TW14588] gi|254795136|ref|YP_003079973.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. TW14359] gi|261228198|ref|ZP_05942479.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. FRIK2000] gi|261255054|ref|ZP_05947587.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. FRIK966] gi|12517802|gb|AAG58321.1|AE005547_7 octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. EDL933] gi|13363539|dbj|BAB37489.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. Sakai] gi|187766779|gb|EDU30623.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4196] gi|188014375|gb|EDU52497.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4113] gi|189001013|gb|EDU69999.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4076] gi|189358538|gb|EDU76957.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4401] gi|189361792|gb|EDU80211.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4486] gi|189364885|gb|EDU83301.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4501] gi|189374093|gb|EDU92509.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC869] gi|189376838|gb|EDU95254.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC508] gi|208734628|gb|EDZ83315.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4045] gi|208738597|gb|EDZ86279.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4042] gi|209157713|gb|ACI35146.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC4115] gi|209758168|gb|ACI77396.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209758170|gb|ACI77397.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209758172|gb|ACI77398.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209758176|gb|ACI77400.1| octaprenyl diphosphate synthase [Escherichia coli] gi|217319685|gb|EEC28110.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. TW14588] gi|254594536|gb|ACT73897.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. TW14359] gi|320189540|gb|EFW64199.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. EC1212] gi|320640258|gb|EFX09830.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. G5101] gi|320645555|gb|EFX14564.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str. 493-89] gi|320650865|gb|EFX19322.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str. H 2687] gi|320666771|gb|EFX33750.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str. LSU-61] gi|326337887|gb|EGD61721.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. 1125] gi|326347457|gb|EGD71182.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str. 1044] Length = 323 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|319406067|emb|CBI79697.1| octaprenyl-diphosphate synthase [Bartonella sp. AR 15-3] Length = 337 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 114/228 (50%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L S +E+ KR++ ++ + ++ M + ++ L+S+ GGK+IR + A + Sbjct: 19 LFSLTKEDMKRVNQLIISM-AKSNVTMIPEISNYLISS------GGKRIRPMITLATAHM 71 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F +++ A+E +H +L+HDD+ +D +RRGK T I + +I+ G+ LL Sbjct: 72 FEYQGDEHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTARILWGNQASILVGDFLL 129 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 AF+++ + + + +LS I +G + Q+ ++ + + I K K Sbjct: 130 GQAFKMMVDVGS-----LEALSVLSNAAAIIAEGEVM-QLSAAKNIETNVSDYLKIIKAK 183 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T AL A E G I+A E+ L +G +LG+ FQL DD+LD Sbjct: 184 TAALFSAAAEIGPIIAGYGHEERSALHQYGLSLGLAFQLIDDVLDYSS 231 >gi|302390068|ref|YP_003825889.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646] gi|302200696|gb|ADL08266.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646] Length = 326 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 8/211 (3%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82 L+ + + ++ + ++ GGK++R LV F+ + + A E I Sbjct: 21 LIENELMRVIEEGDESIRGILKDFFAGGKRLRPKLVLLSGLCFSPVNTKMIYSAVAAELI 80 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H SLIHDD+ +D RR +PT++ Y TA++AG+ + AFE++ Sbjct: 81 HTASLIHDDV--IDRSDYRRNRPTINYVYGNHTAVLAGDYIFAKAFEVLCRQNLNRCMGY 138 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202 + + + + Q + D +DE + F + KT +L+ C+SGA A Sbjct: 139 LVEAIQEMCTGEII------QARESPDLTVDEDRYFRTIEKKTASLIAACCKSGADCGKA 192 Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + E++ FG LG FQ+ DD+LD D Sbjct: 193 DEVQIEKMGLFGLYLGYAFQIVDDILDITGD 223 >gi|15889973|ref|NP_355654.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58] gi|15157936|gb|AAK88439.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58] Length = 304 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 111/235 (47%), Positives = 155/235 (65%), Gaps = 3/235 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 ++L+EN+ + + +L LL A + LL A+R+ L GGK++R FLV E Sbjct: 7 NFETRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESV 66 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +L + L VGAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVH ++DE TAI+AG+ Sbjct: 67 ALLGGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDS 126 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180 LLT AF+II+S L ++ L++SL G+ GM GGQ LD+ E DE + + Sbjct: 127 LLTLAFDIIASDDNPLAAERKAALVISLARAAGIGGMAGGQALDLAAEKKAPDEDGIITL 186 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q MKTGAL+ FACE+GAI+A ++Q E++RLR FGE +G+ FQLADDLLD D Sbjct: 187 QAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTADAA 241 >gi|152990006|ref|YP_001355728.1| geranyltranstransferase [Nitratiruptor sp. SB155-2] gi|151421867|dbj|BAF69371.1| geranyltranstransferase [Nitratiruptor sp. SB155-2] Length = 290 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 123/216 (56%), Gaps = 7/216 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRV 75 + +D L + H+Q+ H A+ Y L GGK+ R L+ N +AL V Sbjct: 5 QLFEDHLQKNLPHVQSFHPFY-TDALGYMLQAGGKRFRPLLLLSIVQAKNPLLIPSALDV 63 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 AIE H YSLIHDDLP MD+ +RRGK T+H +YDE+TA++ G+ L TYAF I+ K Sbjct: 64 AMAIEIFHTYSLIHDDLPVMDDADLRRGKETLHKKYDELTAVLVGDALNTYAFYCIA--K 121 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFAC 193 + L + R++L L N G++GM+ GQ+LD E + Q+ + KT L+ + Sbjct: 122 SALSSDTRAKLTEILAQNGGIEGMVHGQILDCYFENQKLSLEQLQQLHINKTAKLIAASL 181 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + GA++ E+ RL FG +LG++FQ+ DD++D Sbjct: 182 QMGAVIVDLPFIEQNRLYNFGIDLGLLFQIQDDIID 217 >gi|261856267|ref|YP_003263550.1| polyprenyl synthetase [Halothiobacillus neapolitanus c2] gi|261836736|gb|ACX96503.1| Polyprenyl synthetase [Halothiobacillus neapolitanus c2] Length = 309 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 82/237 (34%), Positives = 119/237 (50%), Gaps = 18/237 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL--- 64 Q T D L Q +M + RL AI +A++ GGK++R LV ASL Sbjct: 12 FQSWQSDFQTAFDIRLKQRLGNMLGESPQRLKDAIGHAVIDGGKRLRPILVVLGASLDST 71 Query: 65 -------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 + AIE IH YSLIHDDLPSMDN +RRGKPTVH +DE TAI Sbjct: 72 PGSLPDPNDPRLEQLWNAAVAIELIHGYSLIHDDLPSMDNDDLRRGKPTVHRVFDEATAI 131 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175 +AG+ L + AF +++ + +++++L + G M+ GQ LD+ Sbjct: 132 LAGDALQSLAFSLLADAP---QTDVKTRLNWVSLLSTGANRMVFGQQLDLNPPAQIPALA 188 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ + ++KTGAL+ A GA +S ++ L F LG+ FQ+ DD+LD Sbjct: 189 ELTRMHELKTGALLYAALMMGA--NQSSAEDRAALEAFIRPLGLAFQIQDDILDATG 243 >gi|297380126|gb|ADI35013.1| Geranyltranstransferase [Helicobacter pylori v225d] Length = 303 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 127/244 (52%), Gaps = 15/244 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 MN S +R ++ L+ L H+++ H + L GGK+ R L Sbjct: 1 MNNPNLSFYHNECERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLA 56 Query: 61 C-ASLFN-----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 +L ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE Sbjct: 57 VLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDET 116 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172 TA++ G+ L TY+FE++S+ + L+ +I +L+ L+ N G++GM+ GQ LD E + Sbjct: 117 TAVLIGDALNTYSFELLSN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPL 174 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCE 231 + Q+ + + KT L+ + G + + E + L+ FG +G+ FQ+ DD++D Sbjct: 175 NLEQLTFLHEHKTAKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVT 234 Query: 232 EDLP 235 +D Sbjct: 235 QDEE 238 >gi|189425336|ref|YP_001952513.1| polyprenyl synthetase [Geobacter lovleyi SZ] gi|189421595|gb|ACD95993.1| Polyprenyl synthetase [Geobacter lovleyi SZ] Length = 322 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 13/232 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 +Q + I L + Q +++ + Y L GGK+IR ++ A L Sbjct: 1 MQAALELIGEDLKQVEEQFRKDLESDVP-LIRKVGEYVLASGGKRIRPAMLLLAARLCEY 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+ + + +E IH +L+HDD+ +D+ +RRG + + + +++ G+ L + + Sbjct: 60 QGNQAIPLASVVEFIHTATLLHDDV--VDSATLRRGLASANTLWGNEASVLIGDFLFSKS 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F ++ + + + ++S + +G + Q+L + + E Q + + KT Sbjct: 118 FSLMVAAGS-----LDVLRVMSKATTVIAEGEVL-QLLYTGEVELTEQQYIEVVRAKTAV 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 L+ AC+ GAI+ S +++ L FG LGI FQL DD+LD EE+ K Sbjct: 172 LLSAACQCGAILGGVSPEQEQALADFGMELGIAFQLMDDILDYTASEEEFGK 223 >gi|153207271|ref|ZP_01946035.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212218206|ref|YP_002304993.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154] gi|120576759|gb|EAX33383.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012468|gb|ACJ19848.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154] Length = 332 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 117/234 (50%), Gaps = 20/234 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60 L +Q + + +D ++ + + +SH+ L+ I + ++ GGK++R +V Sbjct: 13 ESLRQPVQNDIEAVDALI---VKELSSHVP------LIETITHHIIQSGGKRLRPLVVLL 63 Query: 61 CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + IE IH +L+HDD+ +D RRG+ T + + +++ Sbjct: 64 TARACGYEQDVEHQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLV 121 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + AF+I++ + N+ +L+ T N +G + Q+++ D IDE + Sbjct: 122 GDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QLMNQNDPDIDEVTYYE 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KT L A E GAI+A ++ ++ + FG +LG+ +Q+ DDLLD +D Sbjct: 176 VIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKD 229 >gi|295100831|emb|CBK98376.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii L2-6] Length = 296 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 129/229 (56%), Gaps = 9/229 (3%) Query: 10 QENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65 E K+ D L + L Q + +D + A RY+LLGG K+IR+ LV + Sbjct: 4 AEYKKQYDEYLARAEKALNQACERYLPEGSD-VCRAARYSLLGGGKRIRAVLVLAVCDML 62 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + N A + AA+E +HCYSLIHDDLP MDN +RRGKP+ H + E TA++AG+ LLT Sbjct: 63 HGNAEAAEQFAAAVEMLHCYSLIHDDLPCMDNDDMRRGKPSCHKAFGESTAMLAGDVLLT 122 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKM 183 AFE ++ T ++ +L G +GM+ GQ LD++ E + E Q+ +I + Sbjct: 123 EAFEAVAGAPT--PASVCVHAAQALGAGAGSRGMVYGQELDLKYEALAAAEEQLRLIHRH 180 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KTGAL+ A + G A A + +++ L + +G++FQ+ DD+LD Sbjct: 181 KTGALINAAIQMGGAAAQADEVQRKALEAYAYGIGLVFQIVDDVLDVTG 229 >gi|58038726|ref|YP_190690.1| dimethylallyltransferase [Gluconobacter oxydans 621H] gi|58001140|gb|AAW60034.1| Dimethylallyltransferase [Gluconobacter oxydans 621H] Length = 301 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 101/239 (42%), Positives = 143/239 (59%), Gaps = 11/239 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 L L I++ +D LL M L+ A+RYA L GGK++R FL E A Sbjct: 9 SLKDALARACSEIESTIDTLLP-----MVPGDESVLIEAMRYAALGGGKRLRGFLAVEVA 63 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF + ALRV A++E +H YSL+HDDLPSMD+ +RRG+P+ H Q+DE AI+AG+ Sbjct: 64 TLFGADRKAALRVAASVELLHAYSLVHDDLPSMDDDDLRRGQPSTHKQFDEAIAILAGDA 123 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 L T AFEI+ P+T +R+ L L+L G GM+GGQ++DI+ E + QV + Sbjct: 124 LQTRAFEILVEPETSPNATVRANLALALAQASGSAGMVGGQVIDIRGEGRALPLDQVRRL 183 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 +KTGAL+ +A ESGAI+A + + +G +LG FQ+ADD+LD E+L K Sbjct: 184 HALKTGALIRYAAESGAILADVDDARRAAIVAYGRDLGTAFQVADDVLDSTATAEELGK 242 >gi|146313257|ref|YP_001178331.1| octaprenyl diphosphate synthase [Enterobacter sp. 638] gi|145320133|gb|ABP62280.1| Trans-hexaprenyltranstransferase [Enterobacter sp. 638] Length = 323 Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 27 SDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQGDAHVNIAALIEFIHTATLLHDDV 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 87 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + I+A ++ ++ L+ Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTEAQERGLQD 198 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219 >gi|241068508|ref|XP_002408454.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase, putative [Ixodes scapularis] gi|215492442|gb|EEC02083.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase, putative [Ixodes scapularis] Length = 345 Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 63/216 (29%), Positives = 114/216 (52%), Gaps = 14/216 (6%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 IL+DL++ ++ L+ + +Y L GGK+IR L A +F+ +++ Sbjct: 84 ILNDLIISCLK-----SDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGDNHIKLA 138 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 +A+E IH +L+HDD+ +D+ +RR KPT +I + T+I+ G+ L + +F+++ + + Sbjct: 139 SAVEFIHTATLLHDDV--VDDSTLRRFKPTANIIWGSKTSILVGDFLFSQSFKLMIASGS 196 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196 I++ +L+ I +G + + + I + I K KT L +CE G Sbjct: 197 -----IKAMNVLAKASAIISEGEVVQLVKLNERRIITIEEYQQIVKSKTAELFGASCEVG 251 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 AI+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 252 AIIAEQLDHVSKDMQDFGKLLGTIFQVIDDLLDYWG 287 >gi|313903572|ref|ZP_07836962.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965] gi|313466125|gb|EFR61649.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965] Length = 331 Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 17/231 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61 G + ++ + ++ + L H ++ Y GG K++R LV Sbjct: 14 GAVFEPIRNDLAAVEVAIRRALDGPDPH--------IVELATYLQRGGGKRLRPALVLLA 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A F + L V AA+E IH +L+HDD+ +D RRG PTV++++ TA++ G+ Sbjct: 66 ARNFQYDRERLLPVAAAVELIHMATLVHDDI--VDGATARRGLPTVNVRWGTGTAVLTGD 123 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L AF ++++ R +++ G + Q + D E + Sbjct: 124 FLFARAFSLLAADGDN-----RVVQVMAEAVYEMSTGEIEQQ-AQLFDPSTGEEGYYRRI 177 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT + C G +M A++ + E LR +G +G+ FQ+ DD+LD Sbjct: 178 YKKTAHFISHCCLMGGLMGGATEQQAEALRRYGYGIGMGFQVIDDILDLTG 228 >gi|123440796|ref|YP_001004787.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087757|emb|CAL10543.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 323 Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALGYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMSDATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A+++ A++ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLSDATEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|306816471|ref|ZP_07450603.1| octaprenyl diphosphate synthase [Escherichia coli NC101] gi|222034904|emb|CAP77647.1| Octaprenyl-diphosphate synthase [Escherichia coli LF82] gi|305850036|gb|EFM50495.1| octaprenyl diphosphate synthase [Escherichia coli NC101] gi|312947744|gb|ADR28571.1| octaprenyl diphosphate synthase [Escherichia coli O83:H1 str. NRG 857C] Length = 323 Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNVHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|16131077|ref|NP_417654.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. MG1655] gi|24114476|ref|NP_708986.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301] gi|30064525|ref|NP_838696.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T] gi|74313724|ref|YP_312143.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046] gi|82545575|ref|YP_409522.1| octaprenyl diphosphate synthase [Shigella boydii Sb227] gi|89109950|ref|AP_003730.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. W3110] gi|110807053|ref|YP_690573.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401] gi|157155105|ref|YP_001464663.1| octaprenyl diphosphate synthase [Escherichia coli E24377A] gi|170018563|ref|YP_001723517.1| octaprenyl diphosphate synthase [Escherichia coli ATCC 8739] gi|170082722|ref|YP_001732042.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. DH10B] gi|170765991|ref|ZP_02900802.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627] gi|188492215|ref|ZP_02999485.1| polyprenyl synthetase [Escherichia coli 53638] gi|194434492|ref|ZP_03066752.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012] gi|194439175|ref|ZP_03071256.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1] gi|209920662|ref|YP_002294746.1| octaprenyl diphosphate synthase [Escherichia coli SE11] gi|218555757|ref|YP_002388670.1| octaprenyl diphosphate synthase [Escherichia coli IAI1] gi|218696892|ref|YP_002404559.1| octaprenyl diphosphate synthase [Escherichia coli 55989] gi|218701956|ref|YP_002409585.1| octaprenyl diphosphate synthase [Escherichia coli IAI39] gi|218706807|ref|YP_002414326.1| octaprenyl diphosphate synthase [Escherichia coli UMN026] gi|238902289|ref|YP_002928085.1| octaprenyl diphosphate synthase [Escherichia coli BW2952] gi|253771979|ref|YP_003034810.1| octaprenyl diphosphate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163129|ref|YP_003046237.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606] gi|256018894|ref|ZP_05432759.1| octaprenyl diphosphate synthase [Shigella sp. D9] gi|256024238|ref|ZP_05438103.1| octaprenyl diphosphate synthase [Escherichia sp. 4_1_40B] gi|260857314|ref|YP_003231205.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str. 11368] gi|260869938|ref|YP_003236340.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str. 11128] gi|291284561|ref|YP_003501379.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str. CB9615] gi|293406796|ref|ZP_06650722.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412] gi|298382537|ref|ZP_06992134.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302] gi|300817559|ref|ZP_07097775.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300823848|ref|ZP_07103972.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300897953|ref|ZP_07116330.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300904377|ref|ZP_07122226.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300918947|ref|ZP_07135503.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300926070|ref|ZP_07141891.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|300929881|ref|ZP_07145324.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|300938101|ref|ZP_07152876.1| polyprenyl synthetase [Escherichia coli MS 21-1] gi|300948840|ref|ZP_07162906.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300955774|ref|ZP_07168117.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|301022044|ref|ZP_07185986.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|301025932|ref|ZP_07189417.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|301301753|ref|ZP_07207887.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|301326382|ref|ZP_07219744.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|307139873|ref|ZP_07499229.1| octaprenyl diphosphate synthase [Escherichia coli H736] gi|307313108|ref|ZP_07592734.1| Trans-hexaprenyltranstransferase [Escherichia coli W] gi|309793766|ref|ZP_07688192.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|312968475|ref|ZP_07782684.1| polyprenyl synthetase family protein [Escherichia coli 2362-75] gi|312972539|ref|ZP_07786713.1| polyprenyl synthetase family protein [Escherichia coli 1827-70] gi|331643885|ref|ZP_08345016.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H736] gi|331648987|ref|ZP_08350075.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M605] gi|331654791|ref|ZP_08355791.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M718] gi|331670014|ref|ZP_08370859.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA271] gi|331679266|ref|ZP_08379938.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H591] gi|332279982|ref|ZP_08392395.1| octaprenyl diphosphate synthase [Shigella sp. D9] gi|83286883|sp|P0AD57|ISPB_ECOLI RecName: Full=Octaprenyl-diphosphate synthase; AltName: Full=All-trans-octaprenyl-diphosphate synthase; AltName: Full=Octaprenyl pyrophosphate synthase; Short=OPP synthase gi|83286884|sp|P0AD58|ISPB_SHIFL RecName: Full=Octaprenyl-diphosphate synthase; AltName: Full=All-trans-octaprenyl-diphosphate synthase; AltName: Full=Octaprenyl pyrophosphate synthase; Short=OPP synthase gi|606125|gb|AAA57988.1| ORF_o323 [Escherichia coli str. K-12 substr. MG1655] gi|1789578|gb|AAC76219.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. MG1655] gi|24053659|gb|AAN44693.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301] gi|30042784|gb|AAP18507.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T] gi|73857201|gb|AAZ89908.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046] gi|81246986|gb|ABB67694.1| octaprenyl diphosphate synthase [Shigella boydii Sb227] gi|85675981|dbj|BAE77231.1| octaprenyl diphosphate synthase [Escherichia coli str. K12 substr. W3110] gi|110616601|gb|ABF05268.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401] gi|157077135|gb|ABV16843.1| octaprenyl-diphosphate synthase [Escherichia coli E24377A] gi|169753491|gb|ACA76190.1| Polyprenyl synthetase [Escherichia coli ATCC 8739] gi|169890557|gb|ACB04264.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr. DH10B] gi|170125137|gb|EDS94068.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627] gi|188487414|gb|EDU62517.1| polyprenyl synthetase [Escherichia coli 53638] gi|194417271|gb|EDX33380.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012] gi|194421871|gb|EDX37877.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1] gi|209758174|gb|ACI77399.1| octaprenyl diphosphate synthase [Escherichia coli] gi|209913921|dbj|BAG78995.1| octaprenyl-diphosphate synthase [Escherichia coli SE11] gi|218353624|emb|CAU99827.1| octaprenyl diphosphate synthase [Escherichia coli 55989] gi|218362525|emb|CAR00149.1| octaprenyl diphosphate synthase [Escherichia coli IAI1] gi|218371942|emb|CAR19798.1| octaprenyl diphosphate synthase [Escherichia coli IAI39] gi|218433904|emb|CAR14821.1| octaprenyl diphosphate synthase [Escherichia coli UMN026] gi|238861931|gb|ACR63929.1| octaprenyl diphosphate synthase [Escherichia coli BW2952] gi|242378730|emb|CAQ33520.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)] gi|253323023|gb|ACT27625.1| Trans-hexaprenyltranstransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975030|gb|ACT40701.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606] gi|253979186|gb|ACT44856.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)] gi|257755963|dbj|BAI27465.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str. 11368] gi|257766294|dbj|BAI37789.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str. 11128] gi|260447786|gb|ACX38208.1| Polyprenyl synthetase [Escherichia coli DH1] gi|281180229|dbj|BAI56559.1| octaprenyl-diphosphate synthase [Escherichia coli SE15] gi|281602570|gb|ADA75554.1| Octaprenyl-diphosphate synthase [Shigella flexneri 2002017] gi|284923209|emb|CBG36303.1| octaprenyl-diphosphate synthase [Escherichia coli 042] gi|290764434|gb|ADD58395.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str. CB9615] gi|291426802|gb|EFE99834.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412] gi|298277677|gb|EFI19193.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302] gi|299879904|gb|EFI88115.1| polyprenyl synthetase [Escherichia coli MS 196-1] gi|300317358|gb|EFJ67142.1| polyprenyl synthetase [Escherichia coli MS 175-1] gi|300358334|gb|EFJ74204.1| polyprenyl synthetase [Escherichia coli MS 198-1] gi|300397718|gb|EFJ81256.1| polyprenyl synthetase [Escherichia coli MS 69-1] gi|300403684|gb|EFJ87222.1| polyprenyl synthetase [Escherichia coli MS 84-1] gi|300413928|gb|EFJ97238.1| polyprenyl synthetase [Escherichia coli MS 115-1] gi|300417874|gb|EFK01185.1| polyprenyl synthetase [Escherichia coli MS 182-1] gi|300451683|gb|EFK15303.1| polyprenyl synthetase [Escherichia coli MS 116-1] gi|300456907|gb|EFK20400.1| polyprenyl synthetase [Escherichia coli MS 21-1] gi|300462199|gb|EFK25692.1| polyprenyl synthetase [Escherichia coli MS 187-1] gi|300523616|gb|EFK44685.1| polyprenyl synthetase [Escherichia coli MS 119-7] gi|300529857|gb|EFK50919.1| polyprenyl synthetase [Escherichia coli MS 107-1] gi|300842734|gb|EFK70494.1| polyprenyl synthetase [Escherichia coli MS 124-1] gi|300846914|gb|EFK74674.1| polyprenyl synthetase [Escherichia coli MS 78-1] gi|306907019|gb|EFN37527.1| Trans-hexaprenyltranstransferase [Escherichia coli W] gi|308122723|gb|EFO59985.1| polyprenyl synthetase [Escherichia coli MS 145-7] gi|309703613|emb|CBJ02953.1| octaprenyl-diphosphate synthase [Escherichia coli ETEC H10407] gi|310334916|gb|EFQ01121.1| polyprenyl synthetase family protein [Escherichia coli 1827-70] gi|312286693|gb|EFR14604.1| polyprenyl synthetase family protein [Escherichia coli 2362-75] gi|313648570|gb|EFS13012.1| polyprenyl synthetase family protein [Shigella flexneri 2a str. 2457T] gi|315062493|gb|ADT76820.1| octaprenyl diphosphate synthase [Escherichia coli W] gi|315137773|dbj|BAJ44932.1| conserved hypothetical protein [Escherichia coli DH1] gi|315257114|gb|EFU37082.1| polyprenyl synthetase [Escherichia coli MS 85-1] gi|315617270|gb|EFU97879.1| polyprenyl synthetase family protein [Escherichia coli 3431] gi|320174552|gb|EFW49688.1| Octaprenyl-diphosphate synthase [Shigella dysenteriae CDC 74-1112] gi|320181462|gb|EFW56380.1| Octaprenyl-diphosphate synthase [Shigella boydii ATCC 9905] gi|320186674|gb|EFW61398.1| Octaprenyl-diphosphate synthase [Shigella flexneri CDC 796-83] gi|320194672|gb|EFW69302.1| Octaprenyl-diphosphate synthase [Escherichia coli WV_060327] gi|320202101|gb|EFW76676.1| Octaprenyl-diphosphate synthase [Escherichia coli EC4100B] gi|320656246|gb|EFX24158.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661936|gb|EFX29344.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str. USDA 5905] gi|323154401|gb|EFZ40602.1| polyprenyl synthetase family protein [Escherichia coli EPECa14] gi|323165148|gb|EFZ50938.1| polyprenyl synthetase family protein [Shigella sonnei 53G] gi|323173553|gb|EFZ59182.1| polyprenyl synthetase family protein [Escherichia coli LT-68] gi|323178637|gb|EFZ64213.1| polyprenyl synthetase family protein [Escherichia coli 1180] gi|323183141|gb|EFZ68539.1| polyprenyl synthetase family protein [Escherichia coli 1357] gi|323189192|gb|EFZ74476.1| polyprenyl synthetase family protein [Escherichia coli RN587/1] gi|323376919|gb|ADX49187.1| Polyprenyl synthetase [Escherichia coli KO11] gi|323936119|gb|EGB32413.1| polyprenyl synthetase [Escherichia coli E1520] gi|323941713|gb|EGB37892.1| polyprenyl synthetase [Escherichia coli E482] gi|323946959|gb|EGB42975.1| polyprenyl synthetase [Escherichia coli H120] gi|323970250|gb|EGB65521.1| polyprenyl synthetase [Escherichia coli TA007] gi|323979096|gb|EGB74174.1| polyprenyl synthetase [Escherichia coli TW10509] gi|324018330|gb|EGB87549.1| polyprenyl synthetase [Escherichia coli MS 117-3] gi|324119552|gb|EGC13434.1| polyprenyl synthetase [Escherichia coli E1167] gi|330909241|gb|EGH37755.1| octaprenyl-diphosphate synthase [Escherichia coli AA86] gi|331037356|gb|EGI09580.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H736] gi|331042734|gb|EGI14876.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M605] gi|331048173|gb|EGI20250.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli M718] gi|331062927|gb|EGI34841.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA271] gi|331073331|gb|EGI44654.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli H591] gi|332086238|gb|EGI91396.1| polyprenyl synthetase family protein [Shigella boydii 5216-82] gi|332086522|gb|EGI91669.1| polyprenyl synthetase family protein [Shigella dysenteriae 155-74] gi|332090693|gb|EGI95787.1| polyprenyl synthetase family protein [Shigella boydii 3594-74] gi|332102334|gb|EGJ05680.1| octaprenyl diphosphate synthase [Shigella sp. D9] gi|332345144|gb|AEE58478.1| polyprenyl synthetase [Escherichia coli UMNK88] gi|332752346|gb|EGJ82736.1| polyprenyl synthetase family protein [Shigella flexneri 4343-70] gi|332752872|gb|EGJ83257.1| polyprenyl synthetase family protein [Shigella flexneri K-671] gi|332754473|gb|EGJ84839.1| polyprenyl synthetase family protein [Shigella flexneri 2747-71] gi|332765183|gb|EGJ95410.1| octaprenyl-diphosphate synthase [Shigella flexneri 2930-71] gi|332998829|gb|EGK18425.1| polyprenyl synthetase family protein [Shigella flexneri VA-6] gi|332999266|gb|EGK18852.1| polyprenyl synthetase family protein [Shigella flexneri K-272] gi|333000017|gb|EGK19600.1| polyprenyl synthetase family protein [Shigella flexneri K-218] gi|333014533|gb|EGK33880.1| polyprenyl synthetase family protein [Shigella flexneri K-304] gi|333014990|gb|EGK34334.1| polyprenyl synthetase family protein [Shigella flexneri K-227] Length = 323 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|217974480|ref|YP_002359231.1| polyprenyl synthetase [Shewanella baltica OS223] gi|217499615|gb|ACK47808.1| Polyprenyl synthetase [Shewanella baltica OS223] Length = 331 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 51 GGKRLRPLLSVLAARAVSYEGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ D+++ +L+ T N+ +G + Q+++ Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMMTEL-----DSMKVLRVLADTTNVLAEGEVL-QLMNCN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A A+ ++ L +G+ LG FQL DDLL Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAGVLAGATLEQETALGNYGKYLGTAFQLTDDLL 222 Query: 229 DCEED 233 D D Sbjct: 223 DYTAD 227 >gi|108563335|ref|YP_627651.1| geranyltranstransferase [Helicobacter pylori HPAG1] gi|107837108|gb|ABF84977.1| geranyltranstransferase [Helicobacter pylori HPAG1] Length = 303 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71 + L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SNA--LLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + E + L+ FG G+ FQ+ DD++D +D Sbjct: 192 SASLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238 >gi|77166478|ref|YP_345003.1| trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707] gi|76884792|gb|ABA59473.1| Trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707] Length = 345 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 19/226 (8%) Query: 22 DLLLQTASHMQTQHNDRLLSAI-------RYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 DL+ + RL S + Y + GGK++R +V A F + Sbjct: 31 DLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQGSYHI 90 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + A IE IH +L+HDD+ +D+ +RRG+ T + + +++ G+ L + AFE++ Sbjct: 91 DIAAIIEFIHTATLLHDDV--VDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVG 148 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 D++R +L+ T N +G + Q+L+ + E I + KT L A Sbjct: 149 -----VDSMRVMEILARTTNTIAEGEVM-QLLNCHEPDTTEECYLEIIRSKTAKLFEAAT 202 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + GA++ H E++ + +G +LG FQL DD+LD EDL K Sbjct: 203 QLGAVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGK 248 >gi|283788174|ref|YP_003368039.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168] gi|282951628|emb|CBG91328.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168] Length = 323 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 27 SDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 87 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + I+A S +++ L+ Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCSDAQEKGLQD 198 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219 >gi|242310626|ref|ZP_04809781.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT 98-5489] gi|239523024|gb|EEQ62890.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT 98-5489] Length = 288 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 5/227 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV- 67 +++N + I + L+ A + + H + GGK+ R L+ + Sbjct: 1 MRKNLQSIFGEFETYLISQAPKVPSFHPYFEKALWEMVENGGKRFRPKLLLSIVDAYKPK 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A A+E +H YSLIHDDLP+MDN +RRG T+H +YDE AI+ G+ L T++ Sbjct: 61 SIQKAFSSALALEILHTYSLIHDDLPAMDNADLRRGAQTLHCKYDECGAILIGDALNTHS 120 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F I++ K LK I+++L+ L++N G+ GM+ GQ LD E + + I KT Sbjct: 121 FYCIATSK--LKPKIKNKLIKILSYNGGIYGMVLGQALDCYFEKQTLPLKDLRTIHLNKT 178 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ + + G I+A + + L G +LG+ FQ+ DD++D + Sbjct: 179 AKLIAASLQMGGIIAKCDKTTCKTLYKIGLDLGLFFQIRDDIIDATQ 225 >gi|187730997|ref|YP_001881898.1| octaprenyl diphosphate synthase [Shigella boydii CDC 3083-94] gi|187427989|gb|ACD07263.1| octaprenyl-diphosphate synthase [Shigella boydii CDC 3083-94] Length = 323 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|332291452|ref|YP_004430061.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5] gi|332169538|gb|AEE18793.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 324 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 12/215 (5%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 + H + L I Y L LGGK++R L LF +H AL AIE Sbjct: 11 FIDYLNKHTLEKEPKNLYDPINYILGLGGKRLRPVLTLMACELFEKDHAIALDAALAIEI 70 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +L A+++ + + Sbjct: 71 FHNFSLVHDDI--MDDAPLRRGKETVHEKWDINTGILSGDAMLIRAYQLFENYEGDTFKE 128 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAI 198 L+ + + GQ D+ E D+ + + + KT L+ A + GAI Sbjct: 129 ------LAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYMKMIEYKTAVLVGAALKMGAI 182 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +A AS+ +E + +G +LG+ FQL DD LD D Sbjct: 183 VAGASKTCQEAIYNYGRDLGLAFQLQDDYLDAFGD 217 >gi|157162671|ref|YP_001459989.1| octaprenyl diphosphate synthase [Escherichia coli HS] gi|157068351|gb|ABV07606.1| octaprenyl-diphosphate synthase [Escherichia coli HS] Length = 323 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVISEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|157825829|ref|YP_001493549.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford] gi|157799787|gb|ABV75041.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford] Length = 327 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 66/225 (29%), Positives = 119/225 (52%), Gaps = 14/225 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLF 65 K+Q++ K T L+DL++ ++ L+ + +Y L GGK+IR L A +F Sbjct: 6 KIQQDLKDEVTKLNDLIISCLK-----SDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + Sbjct: 61 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 118 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 +F+++ + + I++ +L+ I G + + + I + + I K KT Sbjct: 119 QSFKLMVASGS-----IKAMNVLAKASAIISVGEVIQLVKLNERRIITIEEYYQIVKSKT 173 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 L +CE GAI+A + + +R FG LG IFQ+ DDLLD Sbjct: 174 AELFGASCEVGAIIAEQVDHISKDIRYFGTLLGTIFQVIDDLLDY 218 >gi|323961158|gb|EGB56772.1| polyprenyl synthetase [Escherichia coli H489] Length = 323 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|226198039|ref|ZP_03793611.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9] gi|225929915|gb|EEH25930.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9] Length = 344 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 121/230 (52%), Gaps = 14/230 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68 + ++ + LD +L + L +A+RYA+ GG K++R L L + + Sbjct: 56 KTAIRQTEATLDRILPCADGRLTA-----LHAAMRYAVFGGGKRLRPLLCHAAGELVDAS 110 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 +V A IE IH +SLI DDLP+MDN +R G+ T+H QYD TA++A +GL++ AF Sbjct: 111 REALAQVSAVIEMIHVFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAF 170 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTG 186 +S L ++R LM L +IG G+ GGQ +D+ +D T++ + +MKTG Sbjct: 171 LALSEAPLPL--DVRVALMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMHRMKTG 228 Query: 187 ALMCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLADDLLDCEE 232 AL+ A G + E + +GE LG+ +Q+ DD+LD Sbjct: 229 ALIRAAVRMGVLCGTVPGAELGAAWRAVSEYGERLGLAYQVVDDILDSTA 278 >gi|170683435|ref|YP_001745459.1| octaprenyl diphosphate synthase [Escherichia coli SMS-3-5] gi|170521153|gb|ACB19331.1| octaprenyl-diphosphate synthase [Escherichia coli SMS-3-5] Length = 323 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|331664800|ref|ZP_08365705.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA143] gi|331058048|gb|EGI30030.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphatesynthetase) (OPP synthetase) [Escherichia coli TA143] Length = 323 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|271499159|ref|YP_003332184.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586] gi|270342714|gb|ACZ75479.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586] Length = 323 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALNYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLAS-----LRVMSVMSDAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI++ AS ++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEDSYMRVIYSKTARLFEAAAQSSAILSDASSEQELALQEYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|82778501|ref|YP_404850.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197] gi|309785515|ref|ZP_07680146.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617] gi|81242649|gb|ABB63359.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197] gi|308926635|gb|EFP72111.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617] Length = 323 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S NI +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNIIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|89099139|ref|ZP_01172018.1| HepT [Bacillus sp. NRRL B-14911] gi|89086269|gb|EAR65391.1| HepT [Bacillus sp. NRRL B-14911] Length = 320 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 56/232 (24%), Positives = 109/232 (46%), Gaps = 11/232 (4%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 KL+ +D+ ++ + +Q + +++ GGK+IR V A + Sbjct: 2 KLKMMYSFLDSDINIIEQSLEETVQAESPLLRNASMHLLQAGGKRIRPVFVLLSAKFGSY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + +V A+E IH SL+HDD+ +D+ +RRGKPT+ ++D TA+ G+ + + Sbjct: 62 DISEIKKVAVALELIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRTAMYTGDYIFAKS 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E+++ + I ++ ++ + Q+ D + + K KT Sbjct: 120 LEVMTEIERPEAHEILAKTIVEVCVGEI------EQIKDKYRFDQNLRDYLLRIKRKTAL 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 L+ +C+ GA+ A ++ ++L FG +G+ FQ+ DD+LD +L K Sbjct: 174 LIAASCQLGAVAAGVDESIHKKLYKFGYYVGMSFQITDDILDFTGTEKELGK 225 >gi|270295967|ref|ZP_06202167.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273371|gb|EFA19233.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 324 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 19/229 (8%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69 E +RI++ + +L T+ L + + Y L +GGK+IR L+ +L+ + Sbjct: 6 ELLERINSHIAEL-------QFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDI 58 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 IE H Y+L+HDDL MD RRGK TVH +D+ AI++G+ +L A++ Sbjct: 59 TRIFNPATGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQ 116 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTG 186 ++ + + ++ + GQ LD++ E + + + ++KT Sbjct: 117 FMAQCPVEHLKEV------MDIFSLTALEICEGQQLDMEFEHRKDVKAEEYLEMIRLKTS 170 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + + GA++ AS + E+L FG NLG+ FQL DD LD D Sbjct: 171 VLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDIYGDAA 219 >gi|261345175|ref|ZP_05972819.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541] gi|282566867|gb|EFB72402.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541] Length = 323 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + +V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAILAGRSLGYSGHKHTQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+A+A+ +++ L+ +G +G FQL DDLL Sbjct: 155 DPNITEENYMQVIYSKTARLFEAASHASAILANATPAQEKALQDYGRYIGTAFQLVDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|289209165|ref|YP_003461231.1| trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix] gi|288944796|gb|ADC72495.1| Trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix] Length = 322 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 18/231 (7%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 ++ + +D + D L + + + S GGK++R L T A V Sbjct: 11 ADDMQAVDQCIRDRLSSPVVLINQLGHYIIHS-------GGKRLRPLLATLSARACAVEG 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + + A +E IH +L+HDD+ +D +RRG T + + A++ G+ L + AFE Sbjct: 64 DEPVVLAAVVEFIHTATLLHDDV--VDASEMRRGNETANHIFGNEAAVLVGDFLYSRAFE 121 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++ + +R +L+ N+ +G + Q+++ D +DE + + + KT L Sbjct: 122 MMVEVGS-----MRVMEILAHATNVIAEGEVM-QLMNCHDADVDEARYMNVIQSKTAKLF 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 AC+ GAI+ + E+E L +G +LG FQL DD+LD D K+ Sbjct: 176 EAACQLGAILGERPRAEEESLAHYGMHLGTAFQLIDDVLDYSSDDAVTGKR 226 >gi|83590100|ref|YP_430109.1| trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC 39073] gi|83573014|gb|ABC19566.1| Trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC 39073] Length = 322 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 14/225 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 QE + + +LL Q + + L A R+ + GGK++R A Sbjct: 8 QEVQADLQQVEAELLRQVDAP-----DPVLSQAARHLVQAGGKRLRPAFAILAARCCGAP 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L + A+E IH +L+HDD+ +D IRRG+PTV ++ + ++ G+ L + Sbjct: 63 LERILPLAVALEMIHMATLVHDDV--IDASPIRRGRPTVWARWGQELSLHTGDYLFARSL 120 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 ++++ D+ R +L+ +QG + QM D I KT L Sbjct: 121 ILVATY-----DDPRIPSVLASVSVKMVQGEI-QQMAAAFDLDITLRDYLDRIYRKTALL 174 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + +CE GAI A A LR +G NLG+ FQ+ DD+LD D Sbjct: 175 IAASCELGAIAAGADTATIRHLRYYGRNLGLAFQITDDVLDMVAD 219 >gi|332160062|ref|YP_004296639.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607378|emb|CBY28876.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp. palearctica Y11] gi|325664292|gb|ADZ40936.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862049|emb|CBX72215.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica W22703] Length = 323 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALGYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMSDATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A+++ A++ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLSDATEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|183219510|ref|YP_001837506.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909652|ref|YP_001961207.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774328|gb|ABZ92629.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777932|gb|ABZ96230.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 307 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 83/251 (33%), Positives = 129/251 (51%), Gaps = 24/251 (9%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV- 58 M S L ++ + D+ + + S R+ A Y+L GGK++R V Sbjct: 1 MPNSFESILLKSKQVFDSFFESYTAKLFSP-----KTRITEACLYSLHAGGKRVRPIFVI 55 Query: 59 --------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110 + F+ H + A+ECIH YSLIHDDLP+MDN RRGKPT H Q Sbjct: 56 NSFFEPNDLFSSEPFD-THQSVFLAALAVECIHTYSLIHDDLPAMDNDDTRRGKPTCHKQ 114 Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170 +DE TAI+AG+ L + +F+++S + +R + L G+ GM+ GQM DI++E Sbjct: 115 FDEATAILAGDTLNSLSFQLLSMMDANDPNLLR-DSIQILHQGAGMTGMILGQMEDIEEE 173 Query: 171 -----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLA 224 E+++ I + KTGAL+ + G + A E+E L + + +G++FQ+ Sbjct: 174 KNPSSNARESKLESIHEKKTGALITSSFLLGNRL-RADWKEREFVLTRYAKEIGLLFQIT 232 Query: 225 DDLLDCEEDLP 235 DD+LD E +L Sbjct: 233 DDILDVEGNLA 243 >gi|317011137|gb|ADU84884.1| geranyltranstransferase [Helicobacter pylori SouthAfrica7] Length = 303 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL------T 71 + L H+++ H + L GGK+ R L Sbjct: 14 ERFESFLKNHHPHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALAGKKDYLNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SNA--LLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + E L+ FG +G+ FQ+ DD++D +D Sbjct: 192 SASLMMGLVASGNKDEELFRWLQDFGLKMGLCFQVLDDIIDVTQDEK 238 >gi|219852944|ref|YP_002467376.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c] gi|219547203|gb|ACL17653.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c] Length = 320 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 17/231 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L L++ ++D ++D + L GGK++R ++ A Sbjct: 2 ELIEYLEKVGNQVDRLIDRYFGDPVGELNKASAHLL-------TAGGKRLRPAVMMLAAD 54 Query: 64 LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + A+E H ++LIHDD+ MD +RRG PTV+ ++DE TAI+AG+ Sbjct: 55 AVRKGSSDDLMPAAIALELTHSFTLIHDDI--MDGDEVRRGVPTVNKKWDEPTAILAGDV 112 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFM 179 L AF I +R+ ML + + + GQ LD+ E D E + Sbjct: 113 LYARAFAFICQALAMDAAKLRAVSML----AVTCEEICAGQHLDMAFEDRDDVSEEEYLE 168 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + KTGAL + G ++A SQ + + L +G N+G+ FQ+ DDL+D Sbjct: 169 MVGKKTGALYAASTAMGGVLAGGSQPQVDALYRYGMNIGVAFQIQDDLIDL 219 >gi|183601043|ref|ZP_02962536.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827] gi|188019381|gb|EDU57421.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827] Length = 305 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 86/231 (37%), Positives = 130/231 (56%), Gaps = 10/231 (4%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVN 68 Q+ +R++ L + L + L +A+++ ALLGGK++R FL S+ V+ Sbjct: 14 QQAYERVNQYLLNALDAL-----PFSDLPLAAAMKHGALLGGKRLRPFLTYTVGSMLGVD 68 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+ L T AF Sbjct: 69 SVNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAILAGDALQTLAF 128 Query: 129 EIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 +++SS + + D R ++ L + GL GM GGQ LD++ E +D + I + KT Sbjct: 129 QLLSSAEMPDVTDKDRIAMLSELAYASGLAGMCGGQALDLEAEGKRVDLAALERIHQHKT 188 Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 GAL+ A GA A L + E++G+ FQ+ DD+LD D Sbjct: 189 GALIRAAIRMGAYAAGIKGHKALPALDKYAESIGLAFQVQDDILDVIGDSE 239 >gi|253702068|ref|YP_003023257.1| trans-hexaprenyltranstransferase [Geobacter sp. M21] gi|251776918|gb|ACT19499.1| Trans-hexaprenyltranstransferase [Geobacter sp. M21] Length = 322 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 10/225 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + I L ++ LQ +Q+ + Y L GGK+IR LV + L Sbjct: 1 MDAALALIGEDLKNVELQFKKDLQSDVP-LIRKVGEYVLSSGGKRIRPALVLLASRLCGY 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + ++ + + +E IH +L+HDD+ +DN +RRG + + + +++ G+ L + + Sbjct: 60 DGNRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASANTLWGNEASVLVGDFLFSKS 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F ++ + ++R +L+ I +G + Q++ D I + + + KT Sbjct: 118 FSLMVTDG-----DLRILKVLADATTIIAEGEVL-QLVCTCDLDITVERYIEVVRSKTAI 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ ACE GAI+ A ++ L +G +LGI FQL DD LD Sbjct: 172 LLSAACEVGAILGEADPEHRQALADYGMDLGIAFQLMDDTLDYTA 216 >gi|167754003|ref|ZP_02426130.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216] gi|167658628|gb|EDS02758.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216] Length = 337 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 18/242 (7%) Query: 2 NGGLPSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 N PS +N+ +I ++ L Q + RL + I Y+L + GK++R L+ Sbjct: 6 NDSYPSDFSMQNNDQILEAIEHYLGQIGY---PEEPGRLYAPISYSLTMSGKRLRPMLLM 62 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +F+ A+ AA+E H ++L+HDD+ MDN +RRG P+V ++ + AI++ Sbjct: 63 LTCGIFSDQPQAAMPAAAAVEVFHNFTLLHDDI--MDNAAMRRGNPSVFAKWGQNVAILS 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176 G+ +L A+ ++S Q+ I ++ N + GQ D+ E + + Sbjct: 121 GDAMLISAYRLLSEYPPQVLPQILARF------NTMAIEVCEGQQYDMDFETRESVSVEE 174 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--L 234 + ++KT AL+ A GAI+ A + + +RL F LG+ FQL DDLLD D L Sbjct: 175 YLHMIELKTSALLSGATVIGAIIGGAGEEDCQRLYRFATELGLAFQLQDDLLDSYGDERL 234 Query: 235 PK 236 K Sbjct: 235 GK 236 >gi|317180223|dbj|BAJ58009.1| geranyltranstransferase [Helicobacter pylori F32] Length = 303 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 74/231 (32%), Positives = 122/231 (52%), Gaps = 15/231 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67 +R ++ L+ L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLNHYHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+ Sbjct: 70 QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S+ L+ I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT Sbjct: 130 FELLSNA--LLESRIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKT 187 Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQDFGLKMGLCFQVLDDIIDVTQDEE 238 >gi|258514531|ref|YP_003190753.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM 771] gi|257778236|gb|ACV62130.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM 771] Length = 323 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 11/231 (4%) Query: 9 LQENSKRIDTILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65 +++ K + I DDL +++ + Q D LL+ LL GGK++R + Sbjct: 1 MRQLLKLFNEIKDDLKIVEQELYQVVQTPDALLTETSVHLLNAGGKRLRPAFCLLGGKFY 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 N + L + A+E IH SL+HDD+ +D RRG PTV ++ ++ G+ L Sbjct: 61 NYDIKKLLPLAVALELIHMASLVHDDV--VDASMTRRGMPTVKAKWGNRISVHVGDYLFA 118 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 + +ISS K L + S + ++ Q+ + F K KT Sbjct: 119 KSLILISSYKEPLITRVLSDTSVKMSEGEI------QQISTSFNVNQYLKDYFYRIKRKT 172 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ +C+ GA+ A + L +G +G+ FQ+ DD+LD + K Sbjct: 173 ALLISASCQLGAVACGAPKEIYLPLNRYGHYIGMAFQITDDILDMVANKNK 223 >gi|217033116|ref|ZP_03438579.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128] gi|298736116|ref|YP_003728641.1| geranyltranstransferase IspA [Helicobacter pylori B8] gi|216945159|gb|EEC23852.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128] gi|298355305|emb|CBI66177.1| geranyltranstransferase (IspA) [Helicobacter pylori B8] Length = 303 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV-----NHLT 71 + L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SNA--LLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + ++ + L+ FG G+ FQ+ DD++D +D Sbjct: 192 SASLMMGLVASGIKNEELLKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238 >gi|261838303|gb|ACX98069.1| geranyltranstransferase [Helicobacter pylori 51] Length = 303 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 74/231 (32%), Positives = 122/231 (52%), Gaps = 15/231 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67 +R ++ L+ L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLNHHHL----HLESFHPYFEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+ Sbjct: 70 QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S+ + L+ I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT Sbjct: 130 FELLSN--SLLESPIIVELIKILSVNGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKT 187 Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + G + + E + L+ FG G+ FQ+ DD++D +D Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238 >gi|213021975|ref|ZP_03336422.1| octaprenyl diphosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 226 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 27 SDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 87 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + I+A + +++ L+ Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQD 198 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD + Sbjct: 199 YGRYLGTAFQLIDDLLDYSAE 219 >gi|144898411|emb|CAM75275.1| Polyprenyl synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 346 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 115/231 (49%), Gaps = 17/231 (7%) Query: 3 GGLPSKLQENSKRID-TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61 L S ++++ ++++ TI+D + + Q +++A GGK++R L Sbjct: 26 DTLVSLVKDDLEKVNRTIIDRMHSPV--ELIPQLAGHIIAA------GGKRLRPVLTLAS 77 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A L + +++ A +E IH +L+HDD+ +D +RRG+ + + + +++ G+ Sbjct: 78 AKLAGHSGERHVKLAACVEFIHTATLLHDDV--VDESELRRGQASANALFGNKPSVLVGD 135 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L + +FE++ + + +LS ++ +G + Q++ D E + Sbjct: 136 FLFSRSFELMVEDGS-----LPVLAILSRASSVIAEGEVL-QLITANDTDTSEDSYLEVI 189 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KT AL AC GAI+A + E++ L +G NLGI FQL DD+LD Sbjct: 190 RSKTAALFAAACRIGAIVADRPKAEEDALDSYGLNLGIAFQLIDDVLDYSA 240 >gi|88801902|ref|ZP_01117430.1| putative isoprenoid biosynthesis related protein [Polaribacter irgensii 23-P] gi|88782560|gb|EAR13737.1| putative isoprenoid biosynthesis related protein [Polaribacter irgensii 23-P] Length = 340 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 13/220 (5%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 + L S L I Y L LGGK+IR L + +F+ + AL A+ Sbjct: 25 KEFLTYLESKNWIHEPKNLYEPIDYILKLGGKRIRPVLTLMVSDIFSGDFKKALPAALAV 84 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E H ++L+HDD+ MD +RRGKPTVH ++D I++G+ +L A++ + + + Sbjct: 85 EVFHNFTLVHDDI--MDAAPLRRGKPTVHEKWDTNRGILSGDAMLILAYQYFENYDSIVF 142 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESG 196 L+ + + GQ LD+ E + + + ++KT L+ A + G Sbjct: 143 LK------LAKLFSKTALEVCDGQQLDVDFETRSNVTIPEYINMIRLKTSVLVAAALKMG 196 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 AI+A S + + FG NLG+ FQL DD LD D PK Sbjct: 197 AIVAETSDENAQLIYDFGLNLGLAFQLQDDYLDTFGD-PK 235 >gi|188527752|ref|YP_001910439.1| geranyltranstransferase [Helicobacter pylori Shi470] gi|188143992|gb|ACD48409.1| geranyltranstransferase [Helicobacter pylori Shi470] gi|308063758|gb|ADO05645.1| geranyltranstransferase [Helicobacter pylori Sat464] Length = 303 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71 + L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSSQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ + L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 192 SASLMMGFVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238 >gi|109897645|ref|YP_660900.1| polyprenyl synthetase [Pseudoalteromonas atlantica T6c] gi|109699926|gb|ABG39846.1| farnesyl-diphosphate synthase [Pseudoalteromonas atlantica T6c] Length = 296 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 88/236 (37%), Positives = 129/236 (54%), Gaps = 9/236 (3%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + KR+ +D LL + H L +A++YALL GGK++R FLV + Sbjct: 3 FETQQKRVHQHVDALLQAQIGKLG-DHAPTLKNAMQYALLMGGKRMRPFLVYAVGEALGI 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+ECIH YSL+HDDLP+MD+ +RRG PT HIQ+DE AI+AG+ L T A Sbjct: 62 EQSDLDAPALALECIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTLA 121 Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184 FEII + P + + R +L+ L G GM GGQ +D ++ I +TQ+ ++ K Sbjct: 122 FEIIVNYPLSDFANAQRIELVRILGQASGYDGMCGGQGIDLASTNKLITQTQLELLHSKK 181 Query: 185 TGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 TGAL+ A + +++ S K L+ + +G+ FQ+ DD+LD D L K Sbjct: 182 TGALITAAVKMASVLCPSVSDESKSLLQQYASTIGLAFQVQDDILDVVGDSQTLGK 237 >gi|329848574|ref|ZP_08263602.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] gi|328843637|gb|EGF93206.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum C19] Length = 339 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 109/211 (51%), Gaps = 14/211 (6%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 +Q+ + D L++A GGK++R L A L V + ++ AA+E IH Sbjct: 40 MQSEVAVIPALADHLIAA------GGKRLRPLLCVAAARLCEVRNDNHHKLSAAVEFIHT 93 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D+ +RRGK H+ + ++++ G+ L AFE++ + +R+ Sbjct: 94 ATLLHDDV--VDSSSLRRGKVAAHLIWGAPSSVLVGDFLFARAFELMVETGS-----LRA 146 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204 +LS + QG + Q++ D + + I KT AL A ESGA+ A AS+ Sbjct: 147 LDILSKASAVITQGEVL-QLMKAFDLNLSQADYIEIISSKTAALFSAASESGAVAAGASE 205 Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++ L +G NLG+ FQ+ DD+LD + D Sbjct: 206 DKITALYSYGLNLGLAFQIQDDVLDYQGDAA 236 >gi|315181275|gb|ADT88189.1| octaprenyl-diphosphate synthase [Vibrio furnissii NCTC 11218] Length = 396 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 9/189 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE H +L+HDD+ +D +RRGK T + Sbjct: 116 GGKRLRPLLAVLSAKALGYQGQGHTLAAAFIEFTHTATLLHDDV--VDESDMRRGKATAN 173 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F+++ + ++ ++S N+ +G + Q+++ Sbjct: 174 AAFGNAASVLVGDYIYTRSFQMMVELGS-----MKILQLMSEAVNVIAEGEV-QQLMNCN 227 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+A AS + L+ +G+ LG FQL DD++ Sbjct: 228 DPDTTEASYMQVIYSKTARLFEAATQIGAILADASPEIETALQNYGKYLGTAFQLIDDVM 287 Query: 229 DCEEDLPKK 237 D D K+ Sbjct: 288 DYTAD-GKE 295 >gi|194335564|ref|YP_002017358.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|194308041|gb|ACF42741.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 337 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 14/240 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59 M+ L +L EN R+ L + + + L + RY L G GK+IR FL Sbjct: 6 MHEALTQELVENKYRL--YLSRINSALGNCFVRESPITLYAPARYILEGKGKRIRPFLTL 63 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + + AL V A+E +H ++LIHDD+ MD +R G+PTVH +++ AI+ Sbjct: 64 LASEAVCGSSEHALNVALAVEILHNFTLIHDDI--MDQAELRHGRPTVHRRWNTNAAILT 121 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQ 176 G+ ++ YA+E+ +++ L N + GQ LDI+ E Sbjct: 122 GDMMIAYAYELALEAQSERHGE------LVHILNDANITICEGQALDIELEEKNDATIAD 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTG L+ A E+G + A+ + L FGE +G FQ+ DD LD + K Sbjct: 176 YLDMIAKKTGRLISAALEAGGVAGDATDEQLRSLVLFGEKIGQAFQIQDDYLDIMAEDGK 235 >gi|319892507|ref|YP_004149382.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317162203|gb|ADV05746.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Staphylococcus pseudintermedius HKU10-03] Length = 293 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 91/240 (37%), Positives = 134/240 (55%), Gaps = 15/240 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L L++ + ++ ++D +Q L ++RY+L GGK+IR L+ Sbjct: 1 MNQSLNELLEQFNGHLNHAIED----------SQLGTSLEQSMRYSLEAGGKRIRPLLML 50 Query: 60 ECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 + + + + V A+E IH YSLIHDDLP+MD+ +RRGKPT H Y E AI+ Sbjct: 51 ATIKMLDHQKLESGMHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTVYGEWLAIL 110 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 AG+ LLT AFE I+ T + I+ L+ ++ G QGM+GGQ LD+Q E I + Sbjct: 111 AGDALLTKAFEKIA-LTTHIDAQIKVALIEKISQASGHQGMVGGQTLDMQSENQQISLEK 169 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I KTGAL+ FA E+ I+ Q ++L F ++LG+IFQ+ DDLLD + K Sbjct: 170 LESIHIHKTGALIQFAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKDDLLDVYGNEAK 229 >gi|304316531|ref|YP_003851676.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778033|gb|ADL68592.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 319 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 15/226 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 + ++++ K+ID L + + ++ D + L GGK++R LV A L Sbjct: 6 AFVKDDMKKIDDFLLSNIKTNSPTIKKAVEDLV-------LSGGKRVRPLLVIAIARLGE 58 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N + + A+IE +H +L+HDD+ +D+ +RRG+ +V +Y + TA+ G+ L + Sbjct: 59 YNEDKIIPIAASIEIMHMATLVHDDI--IDDSKMRRGRESVQSKYGKETAVFTGDFLFSQ 116 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF +I+ ++ + ++ + ++ Q + + I + KT Sbjct: 117 AFNVIADIISKENLKLIARGVKAICEGEI------EQFDNRYNLDISVLRYLKRIYRKTA 170 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L +CESGA A S+ +R FG N+G+ FQ+ADD+LD E Sbjct: 171 LLFAISCESGATQAGLSKELTRAMRRFGLNVGMAFQIADDILDYEG 216 >gi|238761751|ref|ZP_04622725.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638] gi|238699865|gb|EEP92608.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638] Length = 323 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALGYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMSAATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S AI++ A+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAILSDATPEQELTLQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|118586761|ref|ZP_01544198.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus oeni ATCC BAA-1163] gi|118432849|gb|EAV39578.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus oeni ATCC BAA-1163] Length = 278 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 79/226 (34%), Positives = 120/226 (53%), Gaps = 11/226 (4%) Query: 21 DDLLLQTASHMQTQHNDR---LLSAIRYALLG-GKKIRSFLVTEC-ASLFNVNHLTALRV 75 + L + + + DR + I YAL GK++R L A+ NV + + + Sbjct: 11 NRYLPEINNDLSNYFADRDDDIFRMITYALNSTGKRLRPLLTLATFAAAGNVINDSTIEA 70 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E +H YSL+HDDLP MD+ RR + + ++ A++ G+GLLT AF+ IS+ Sbjct: 71 ATAVEFVHAYSLVHDDLPEMDDDTKRRNQSSTWKKFGVGNAVLVGDGLLTEAFKKISNL- 129 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFAC 193 L ++IR +L+ +L G M+ GQ D QD+ + I MKTGALM +A Sbjct: 130 -SLPESIRLRLIYNLALAAGPDNMVRGQQYDLFSQDKVESIDDLEFIHLMKTGALMTYAA 188 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237 +G I+A S ++ L +G NLGI FQ+ DDL D ++D KK Sbjct: 189 TAGGILAGLSDDKLRALNIYGANLGIAFQIKDDLRDIKQDEEENKK 234 >gi|325300424|ref|YP_004260341.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170] gi|324319977|gb|ADY37868.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170] Length = 327 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 14/228 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q+N+K + + L + + L + Y L +GGK+IR L+ +LF + Sbjct: 3 QQNAKALQELFQTYLENLSY---AREPMGLYKPVEYVLGIGGKRIRPTLMLLAYNLFKED 59 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L A+E H ++L+HDDL MD RRGKPTVH Q+DE AI++G+ ++ ++ Sbjct: 60 VHAVLSQAMALETYHNFTLLHDDL--MDKADRRRGKPTVHKQWDENAAILSGDAMVMLSY 117 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKT 185 + + + + + ++ + L + GQ D++ E + + + ++KT Sbjct: 118 QFM----MKDCPAMYVRPVMEVFSQTAL-EICEGQQWDMEFERRQDVTAGEYMEMIRLKT 172 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ A + GAI+ AS+ + ++L G +G+ FQL DD LD D Sbjct: 173 SVLLAGALKIGAILGGASEADAQKLYDLGIRIGLAFQLQDDYLDVYGD 220 >gi|330962412|gb|EGH62672.1| CrtE [Pseudomonas syringae pv. maculicola str. ES4326] Length = 304 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 127/239 (53%), Gaps = 9/239 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 ++ GL L +RI+ L+DLL + D + A+R L GK++R L+ Sbjct: 12 LDSGLTEHLASVRERIEKRLNDLLPAGGNE-----RDLVAIAMREGTLAPGKRVRPMLLM 66 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + AL +G A+E IH SL+ DD+P MD+ +RRG PTVH+++ + AI+A Sbjct: 67 LAADGLGHDSSAALELGCAVEMIHAASLVLDDMPCMDDARLRRGLPTVHLKFGQDVAILA 126 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQV 177 LL+ AF +++ +++ +R+QL+ L + +G+QG++ GQ D+ D D Q+ Sbjct: 127 AVALLSRAFGVVAGI-SEVPPAVRTQLVGVLANAVGMQGLVRGQFQDLHDGLHSRDAEQI 185 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++KTG L + ++++ A + + L+ F LG FQL DDL D D K Sbjct: 186 ATTNRLKTGVLFSAIMDMASLVSGADEGTRAGLQDFATELGQAFQLYDDLQDKSADNAK 244 >gi|157964658|ref|YP_001499482.1| octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5] gi|157844434|gb|ABV84935.1| Octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5] Length = 363 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 62/220 (28%), Positives = 117/220 (53%), Gaps = 11/220 (5%) Query: 15 RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70 +I L D + + + + + + ++ L+ + +Y L GGK+IR L A +F+ Sbjct: 42 KIQQDLKDAVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 101 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + +F++ Sbjct: 102 NHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 159 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 + + + I++ +L+ I +G + + + I + I K KT L Sbjct: 160 MVASGS-----IKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFG 214 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ACE GAI+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 215 AACEVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDY 254 >gi|197287216|ref|YP_002153088.1| octaprenyl diphosphate synthase [Proteus mirabilis HI4320] gi|227357090|ref|ZP_03841460.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906] gi|194684703|emb|CAR46670.1| octaprenyl-diphosphate synthase [Proteus mirabilis HI4320] gi|227162782|gb|EEI47745.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906] Length = 323 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLTGRALDYQGDKHISVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSSATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+ A+ +++ + +G LG FQL DDLL Sbjct: 155 DPDITEDDYMQVIYSKTARLFEAASHASAILCGATPEQEKAFQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|254481105|ref|ZP_05094351.1| polyprenyl synthetase superfamily protein [marine gamma proteobacterium HTCC2148] gi|214038900|gb|EEB79561.1| polyprenyl synthetase superfamily protein [marine gamma proteobacterium HTCC2148] Length = 303 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 84/241 (34%), Positives = 133/241 (55%), Gaps = 7/241 (2%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALL-GGKKIRSFL 57 M +++ R + L +L ASH + +H L +A Y+L GGK++R + Sbjct: 1 MKADFDGEMESCRLRCNQRLAELPFDIASHSEAAAEHISELQNAYLYSLASGGKRVRPAI 60 Query: 58 VTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 + A H + + A+E +H YSLIHDDLP+MD+ +RRGKP++H Y+E TA Sbjct: 61 LYFAAQCVGGGHCESLDQASCALELVHTYSLIHDDLPAMDDDDMRRGKPSLHKAYEESTA 120 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDE 174 I+ G+GL AFE++ L + +++ L GL+GM+GGQ +DIQ I Sbjct: 121 ILVGDGLQARAFELLIDAPN-LTAEQKIRMVKVLAEAAGLKGMVGGQYIDIQVTGADITL 179 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 ++ + MKTGAL+ + G I A+A++ + L +G ++G+ FQ+ADD+LD E D Sbjct: 180 DELQAMHSMKTGALIRASLALGGIAANATEEQLAALDEYGTHIGLAFQVADDILDVEGDA 239 Query: 235 P 235 Sbjct: 240 E 240 >gi|34496302|ref|NP_900517.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC 12472] gi|34102155|gb|AAQ58522.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC 12472] Length = 309 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 9/196 (4%) Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + Y + GGK++R L + A IE IH +L+HDD+ +D Sbjct: 19 IRQVAEYIISAGGKRLRPILTLLSGRALGYRGEHLFELAAMIEFIHTATLLHDDV--VDE 76 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG+ T + + +++ G+ L T AF+++ + + N+ +++ NI + Sbjct: 77 SDLRRGRKTANALFGNAASVLVGDFLYTRAFQMMVTTR-----NMTILEVMAEATNIIAE 131 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 G + Q+L+I + + E + + + KT L A GA++A AS + + +G L Sbjct: 132 GEVL-QLLNIGNTDVSEDEYLKVIQYKTAKLFEAAARVGALIADASAEQVRAMADYGMYL 190 Query: 218 GIIFQLADDLLDCEED 233 G FQ+ DD+LD D Sbjct: 191 GTAFQIIDDVLDYSGD 206 >gi|315634196|ref|ZP_07889485.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393] gi|315477446|gb|EFU68189.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393] Length = 296 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 84/233 (36%), Positives = 127/233 (54%), Gaps = 7/233 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66 + E+ + + ++ L + +H+ + L A++Y LLGGK+IR FLV + Sbjct: 3 QFSEDLQHVQQRINHFLAEQFAHLDSA-PAPLADAMKYGLLLGGKRIRPFLVYATGRMLG 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + AAIE IH YSLIHDDLP+MD+ +RRG T HI +DE TAI+AG+ L + Sbjct: 62 ADLAQLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHKTCHIAFDEATAILAGDALQAF 121 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184 AFEI++ T L + L+ +L+ G++GM GQ LD+ E I ++ I K Sbjct: 122 AFEILTDIPT-LSAEQKLALIKTLSAASGVKGMCLGQSLDLISEHKVISLQELEHIHLNK 180 Query: 185 TGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 TGAL+ A G I + A + ++L + +G+ FQ+ DD+LD E D Sbjct: 181 TGALLTAALMMGFICSPHFAEKALAQQLERYATAIGLAFQVQDDILDIEGDSE 233 >gi|156120113|gb|ABG57080.2| Hep2 [Heliophilum fasciatum] Length = 320 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 15/236 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M+ L ++Q + R++ L + M T H ++ GGK++R V Sbjct: 1 MSFQLFREIQADLARVEKELSNY-------MDTDHPTLTAASGHLLYAGGKRLRPAFVLL 53 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 N + L + +E IH +L+HDD+ +D RRG PTV ++ ++ AG Sbjct: 54 AGRFHNYSFERLLPLAVTMEMIHMATLVHDDV--IDESETRRGTPTVRARWGNRVSMHAG 111 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + L + +I+ + + ++ + + QM D + Sbjct: 112 DHLFARSLLLIAEMNNPIIARVLAETSVEMCEGEI------QQMATAFDVEQNFRDYLYR 165 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 K KT L+ +C+ GA+ A L+ +G +LG+ FQ+ DD+LD E D K Sbjct: 166 IKRKTALLLSASCQLGAVAVDAPPYMIRALKWYGYHLGMAFQVTDDILDLEADEAK 221 >gi|39996419|ref|NP_952370.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA] gi|39983299|gb|AAR34693.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA] gi|298505429|gb|ADI84152.1| octaprenyl diphosphate synthase [Geobacter sulfurreducens KN400] Length = 322 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 12/198 (6%) Query: 44 RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 Y L GGK+IR L+ A L + + + IE IH +L+HDD+ +DN +RR Sbjct: 35 EYVLASGGKRIRPMLLLLSAKLCGYQGDRHVPLASVIEFIHTATLLHDDV--VDNATLRR 92 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G + + + +++ G+ L + +F ++ ++R ++S I +G + Sbjct: 93 GNASANEVWGNEASVLVGDFLFSKSFSLMVEAG-----DLRILKVISGATTIIAEGEVL- 146 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q+L D + + + + K KT L+ ACE+GAI+ +S ++E LR FG +LGI FQ Sbjct: 147 QLLCTSDLEMTQERYIEVVKSKTAVLLSAACEAGAILGTSSAEQQEALRDFGMDLGIAFQ 206 Query: 223 LADDLLDC---EEDLPKK 237 L DD LD EE K+ Sbjct: 207 LMDDTLDYTASEEQFGKE 224 >gi|208434832|ref|YP_002266498.1| geranyltrans transferase [Helicobacter pylori G27] gi|208432761|gb|ACI27632.1| geranyltrans transferase [Helicobacter pylori G27] Length = 303 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71 + L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLKNHHLHLESFHPYLQKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SNA--LLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + E + L+ FG G+ FQ+ DD++D +D Sbjct: 192 SASLMMGLVASGIKNEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238 >gi|323464391|gb|ADX76544.1| geranyltranstransferase [Staphylococcus pseudintermedius ED99] Length = 296 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 90/240 (37%), Positives = 133/240 (55%), Gaps = 15/240 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN L L++ + ++ ++D +Q L ++RY+L GGK+IR L+ Sbjct: 4 MNQNLNELLEQFNGHLNHAIED----------SQLGTSLEQSMRYSLEAGGKRIRPLLML 53 Query: 60 ECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 + + + + V A+E IH YSLIHDDLP+MD+ +RRGKPT H Y E AI+ Sbjct: 54 ATIKMLDHQKLESGMHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTVYGEWLAIL 113 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 AG+ LLT AFE I+ + I+ L+ ++ G QGM+GGQ LD+Q E I + Sbjct: 114 AGDALLTKAFEKIA-LTPHIDAQIKVALIEKISQASGHQGMVGGQTLDMQSENQQISLEK 172 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + I KTGAL+ FA E+ I+ Q ++L F ++LG+IFQ+ DDLLD + K Sbjct: 173 LESIHIHKTGALIQFAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKDDLLDVYGNEAK 232 >gi|292486819|ref|YP_003529689.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430] gi|292900783|ref|YP_003540152.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946] gi|291200631|emb|CBJ47763.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946] gi|291552236|emb|CBA19273.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430] gi|312170887|emb|CBX79146.1| octaprenyl diphosphate synthase [Erwinia amylovora ATCC BAA-2158] Length = 324 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 64/227 (28%), Positives = 114/227 (50%), Gaps = 13/227 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFN- 66 N ++I+ + + + + Q N L++ + Y ++ GGK+IR + A N Sbjct: 2 NLEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAIND 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T Sbjct: 62 YAGKQHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF++++S + ++ ++S N+ +G + Q+++ D I E + KT Sbjct: 120 AFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QLMNCNDPDITEESYMRVIYSKTA 173 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A +S AI+A AS E++ L+ +G +G FQL DDLLD D Sbjct: 174 RLFEAAAQSSAILAGASATEEQALQDYGRYIGTAFQLIDDLLDYSAD 220 >gi|194333227|ref|YP_002015087.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271] gi|194311045|gb|ACF45440.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271] Length = 337 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 19/239 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60 + +K +E KRI+ L A + L + RY L G GK+IR FL Sbjct: 12 QDQVETKYKEYHKRINDAL-------AGCFTKSTPETLYAPARYILEGKGKRIRPFLTLL 64 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + AL +E +H ++L+HDD+ MD +R G+PTVH+++DE AI++G Sbjct: 65 AAESVCNSSDDALNAALGVEILHNFTLMHDDI--MDQADLRHGRPTVHLKWDENAAILSG 122 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QV 177 + ++ +A+E + KT L N + GQ LD++ E E Sbjct: 123 DMMIAFAYECALNTKTDRHAE------LVHILNDANITICEGQALDMELEQRAEATIADY 176 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTG L+ A E+G ++ +A + + L FGE +G FQ+ DD LD D K Sbjct: 177 LDMISKKTGRLISAALEAGGVVGNADALQLQALVTFGEKIGRAFQVQDDYLDIMADDGK 235 >gi|310766238|gb|ADP11188.1| Octaprenyl diphosphate synthase [Erwinia sp. Ejp617] Length = 324 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 13/227 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFN- 66 N ++I+ + + + + Q N L++ + Y ++ GGK+IR + A N Sbjct: 2 NLEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAIND 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T Sbjct: 62 YAGKQHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF++++S + ++ ++S N+ +G + Q+++ D I E + KT Sbjct: 120 AFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QLMNCNDPDITEESYMRVIYSKTA 173 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A +S AI+A AS+ E++ L+ +G +G FQL DDLLD D Sbjct: 174 RLFEAAAQSSAILAGASEAEEQALQDYGRYIGTAFQLIDDLLDYSAD 220 >gi|259907026|ref|YP_002647382.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96] gi|224962648|emb|CAX54103.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96] gi|283476821|emb|CAY72659.1| octaprenyl diphosphate synthase [Erwinia pyrifoliae DSM 12163] Length = 324 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 13/227 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFN- 66 N ++I+ + + + + Q N L++ + Y ++ GGK+IR + A N Sbjct: 2 NLEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAIND 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T Sbjct: 62 YAGKQHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF++++S + ++ ++S N+ +G + Q+++ D I E + KT Sbjct: 120 AFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QLMNCNDPDITEESYMRVIYSKTA 173 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A +S AI+A AS+ E++ L+ +G +G FQL DDLLD D Sbjct: 174 RLFEAAAQSSAILAGASEAEEQALQDYGRYIGTAFQLIDDLLDYSAD 220 >gi|207721484|ref|YP_002251924.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum MolK2] gi|206586644|emb|CAQ17230.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum MolK2] Length = 352 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + E+ +D ++ L + + Q + ++SA GGK++R ++ A+ Sbjct: 36 LLAPVAEDMHAVDAVIRRRLGSEVA-LINQIGEYIISA------GGKRLRPVILLLMANA 88 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 89 LGYRGNHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTANAVFGNAASVLVGDFLY 146 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + AF+++ D++R +L+ N+ +G + Q+L++ D + E + + + K Sbjct: 147 SRAFQMMVQA-----DSMRVMQILADATNVISEGEVL-QLLNMHDPDVTEERYLQVIRYK 200 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T L A + GA+++ A + +G +G FQ+ DDLLD Sbjct: 201 TAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 248 >gi|325917351|ref|ZP_08179568.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325536438|gb|EGD08217.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937] Length = 287 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 114/209 (54%), Gaps = 1/209 (0%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L+ A T RL +A+R+A+LGG K++R LV +LF ++E IH Sbjct: 13 LEAALPGATLAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFRAAEDLLDTPAVSVELIH 72 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE+++S + + Sbjct: 73 AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLASAPVSAELRVG 132 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ G +D + + + +KTGAL+ A GA+ A+ Sbjct: 133 WLQHLASAAGAGGMCGGQALDIDATGQVQSLHALQRMHALKTGALIRAAVRMGALSGRAA 192 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232 +++R+ F + LG+ FQ+ DD+LD E Sbjct: 193 PADQQRVDDFADALGLAFQVRDDILDVES 221 >gi|195953616|ref|YP_002121906.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1] gi|195933228|gb|ACG57928.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 258 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 70/222 (31%), Positives = 116/222 (52%), Gaps = 15/222 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67 + +I+ L +LL L A+ Y + GK+IR L ++ Sbjct: 3 FDDLRPKIEKRLRELLTPFE-------PKVLYDAMAYYVFQEGKRIRPVLCVIGGYACDL 55 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A+ +G A+E IH YSLIHDD+P +DN RRGKPT H + + A++AG+GLL+ A Sbjct: 56 DEEDAITLGCAVEFIHNYSLIHDDMPELDNDDERRGKPTCHKIFGQDIALLAGDGLLSLA 115 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F+I+S+ ++++ ++ N G++GM+ GQ+ DI+ E + +KT A Sbjct: 116 FDILSNESLYKNPKNLAKVVNYVSKNAGIEGMVAGQVYDIKG----EKDFLKVASLKTAA 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L+ + +I+ + E+L G N+G++FQL DD D Sbjct: 172 LIKTSLVIPSILKGVDFSLYEKL---GHNIGVLFQLTDDYYD 210 >gi|148643503|ref|YP_001274016.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA [Methanobrevibacter smithii ATCC 35061] gi|148552520|gb|ABQ87648.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA [Methanobrevibacter smithii ATCC 35061] Length = 330 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 7/204 (3%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L A Y GGK +R L + + +L+ AAIE IH +SLIH Sbjct: 27 PNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIH--DDI 84 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRGKP VH +DE AI+AG+ L + AFEII + + + L+ T Sbjct: 85 MDDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNTPTQLSQTLA-TVAD 143 Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + GQ D+ E + E + + KTGAL+ A ++GAIM A+Q + + Sbjct: 144 ACVKICEGQASDMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMY 203 Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235 +G +G+ FQ+ DD LD D Sbjct: 204 DYGRLIGLAFQIQDDYLDLASDEE 227 >gi|297518736|ref|ZP_06937122.1| octaprenyl diphosphate synthase [Escherichia coli OP50] Length = 286 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 6 GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 63 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 64 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 117 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + I+A + E++ L+ +G LG FQL DDLL Sbjct: 118 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 177 Query: 229 DCEED 233 D D Sbjct: 178 DYNAD 182 >gi|254460310|ref|ZP_05073726.1| geranyltranstransferase [Rhodobacterales bacterium HTCC2083] gi|206676899|gb|EDZ41386.1| geranyltranstransferase [Rhodobacteraceae bacterium HTCC2083] Length = 284 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 130/209 (62%), Gaps = 7/209 (3%) Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 + + + ++ A+RYA GGK++R+FLV E A + V+ ++ AIE +H YSL+HD Sbjct: 16 LSSFADVPIVQAMRYATTGGKRLRAFLVRESARVCGVDVARSIAPACAIEALHAYSLVHD 75 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150 DLP MD+ +RRG+PTVH+++D+ TA++ G+ L T AFE++S P +RS L L+L Sbjct: 76 DLPCMDDDDLRRGQPTVHVKWDDATAVLCGDALQTLAFELVSEPSCHEDPLVRSTLALTL 135 Query: 151 THNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 G GM+ GQ LDI+ E + Q+ +Q KTGAL+ ++ +GA++A A N Sbjct: 136 ARASGAAGMVYGQALDIEAESAANPLTIEQITELQNGKTGALITWSATAGAVLAKADTN- 194 Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ +G+ LG+ FQ+ADD+LD D Sbjct: 195 --ALKTYGDALGLAFQIADDILDVTSDAE 221 >gi|165918704|ref|ZP_02218790.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334] gi|165917639|gb|EDR36243.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334] Length = 332 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 117/234 (50%), Gaps = 20/234 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60 L +Q + + +D ++ + + +SH+ L+ I + ++ GGK++R +V Sbjct: 13 ESLRQPVQNDIEAVDALI---VKELSSHVP------LIETITHHIIQSGGKRLRPLVVLL 63 Query: 61 CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + IE IH +L+HDD+ +D RRG+ T + + +++ Sbjct: 64 TARACGYEQDVEHQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLV 121 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + AF+I++ + N+ +L+ T N +G + Q+++ D IDE + Sbjct: 122 GDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QLMNQNDPDIDEVTYYE 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KT L A E GAI+A ++ ++ + FG +LG+ +Q+ DDLLD +D Sbjct: 176 VIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKD 229 >gi|254779530|ref|YP_003057636.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Helicobacter pylori B38] gi|254001442|emb|CAX29437.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Helicobacter pylori B38] Length = 303 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 15/231 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67 +R ++ L+ L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+ Sbjct: 70 QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S+ + L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT Sbjct: 130 FELLSN--SLLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKT 187 Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 188 AKLISTSLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEK 238 >gi|229546828|ref|ZP_04435553.1| geranyltranstransferase [Enterococcus faecalis TX1322] gi|256852634|ref|ZP_05558005.1| geranyltranstransferase [Enterococcus faecalis T8] gi|257077869|ref|ZP_05572230.1| polyprenyl synthetase [Enterococcus faecalis JH1] gi|294780571|ref|ZP_06745934.1| geranyltranstransferase [Enterococcus faecalis PC1.1] gi|307268062|ref|ZP_07549450.1| geranyltranstransferase [Enterococcus faecalis TX4248] gi|307289416|ref|ZP_07569370.1| geranyltranstransferase [Enterococcus faecalis TX0109] gi|307290056|ref|ZP_07569980.1| geranyltranstransferase [Enterococcus faecalis TX0411] gi|229307993|gb|EEN73980.1| geranyltranstransferase [Enterococcus faecalis TX1322] gi|256711979|gb|EEU27016.1| geranyltranstransferase [Enterococcus faecalis T8] gi|256985899|gb|EEU73201.1| polyprenyl synthetase [Enterococcus faecalis JH1] gi|294452398|gb|EFG20837.1| geranyltranstransferase [Enterococcus faecalis PC1.1] gi|306498898|gb|EFM68392.1| geranyltranstransferase [Enterococcus faecalis TX0411] gi|306499671|gb|EFM69034.1| geranyltranstransferase [Enterococcus faecalis TX0109] gi|306515703|gb|EFM84230.1| geranyltranstransferase [Enterococcus faecalis TX4248] gi|315029671|gb|EFT41603.1| geranyltranstransferase [Enterococcus faecalis TX4000] gi|315031732|gb|EFT43664.1| geranyltranstransferase [Enterococcus faecalis TX0017] gi|315147933|gb|EFT91949.1| geranyltranstransferase [Enterococcus faecalis TX4244] gi|315165153|gb|EFU09170.1| geranyltranstransferase [Enterococcus faecalis TX1302] gi|323480221|gb|ADX79660.1| Farnesyl-diphosphate synthase [Enterococcus faecalis 62] gi|327534568|gb|AEA93402.1| geranyltranstransferase [Enterococcus faecalis OG1RF] Length = 293 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 88/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G I+A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGILANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|227890284|ref|ZP_04008089.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200] gi|227849098|gb|EEJ59184.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200] Length = 288 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 119/233 (51%), Gaps = 17/233 (7%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECASLF 65 KL++ ++ +D+ L + H+ T+ ++ S + Y+++ GGK++R L Sbjct: 2 KLKDFQEKYTPQIDNFLKE---HLVTEIDNLTFSKIMSYSVMAGGKRLRPLLFLATLETL 58 Query: 66 NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+GLL Sbjct: 59 NHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLL 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFM 179 + I+ I + +G GM+GGQ LDI D + + Sbjct: 119 PLGIQWITEGSNSAALAIVI------SQAVGPNGMVGGQYLDIDTTNNDSAKENAKMIDQ 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ +KTG L+ + + AI A A+ +E RL F + G +Q+ DDL+D E Sbjct: 173 MEWLKTGCLIEASVKMAAIYAGATDSEFNRLDNFSKRFGRSYQIYDDLVDVVE 225 >gi|325128970|gb|EGC51821.1| geranyltranstransferase [Neisseria meningitidis N1568] Length = 249 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 112/217 (51%), Gaps = 3/217 (1%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +LLL+ + + L A+RYA L GGK++R LV + L H + AAIE Sbjct: 19 ELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIE 78 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH YSL+HDD+P+MDN +RRGKPT HI+Y E A++ G+ L T AF+++S P Sbjct: 79 MIHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLSRPTELPAA 138 Query: 141 NIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199 + +L+ L + + + + + +KTGAL+ A GA+ Sbjct: 139 RQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMS 198 Query: 200 A-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + S++ L + LG+ FQ+ DD+LDC+ D Sbjct: 199 CPNLSEDSLAVLDAYAAKLGLAFQVIDDVLDCDADTA 235 >gi|308062245|gb|ADO04133.1| geranyltranstransferase [Helicobacter pylori Cuz20] Length = 303 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 127/244 (52%), Gaps = 15/244 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 MN S +R ++ L+ L H+++ H + L GGK+ R L Sbjct: 1 MNNPNLSFYHNECERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLA 56 Query: 61 C-ASLFN-----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 +L ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE Sbjct: 57 VLCALVGQKDYSNRQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDET 116 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172 TA++ G+ L TY+FE++S+ + L+ +I +L+ L+ N G++GM+ GQ LD E + Sbjct: 117 TAVLIGDALNTYSFELLSN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPL 174 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCE 231 + Q+ + + KT L+ + G + + E + L+ FG +G+ FQ+ DD++D Sbjct: 175 NLEQLTFLHEHKTAKLISASLMMGLVASGIKDEELFKWLQDFGLKMGLCFQVLDDIIDVT 234 Query: 232 EDLP 235 +D Sbjct: 235 QDEE 238 >gi|110635757|ref|YP_675965.1| farnesyl-diphosphate synthase [Mesorhizobium sp. BNC1] gi|110286741|gb|ABG64800.1| farnesyl-diphosphate synthase [Chelativorans sp. BNC1] Length = 305 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 112/231 (48%), Positives = 155/231 (67%), Gaps = 3/231 (1%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 S L N++ ++ +L LL + + LL+A+R+ L GGK++R FLV E A+ Sbjct: 9 FESLLALNAQSVEDLLRHLLDERVREGEILRPSHLLAAMRHGVLNGGKRLRPFLVLESAA 68 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF + +LRV AA+EC+HCYSLIHDDLP+MD+ +RRG+PTVH +DE TAI+AG+ L Sbjct: 69 LFEAQGMASLRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHRAFDEATAILAGDSL 128 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181 LTYAF+II+ +T L+ IR+ L++ L G+ GM GGQ LD+ E + DE + +Q Sbjct: 129 LTYAFDIIADAETDLRPEIRADLVVKLATAAGMGGMAGGQALDLLAEKVPPDEVGIVQLQ 188 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 MKTGAL FACE+GAI+A AS ++ER+ FG +G+ FQLADDLLD Sbjct: 189 AMKTGALFRFACEAGAIVADASSADRERMSSFGAAIGLAFQLADDLLDLTA 239 >gi|270339768|ref|ZP_06005968.2| polyprenyl synthetase [Prevotella bergensis DSM 17361] gi|270333767|gb|EFA44553.1| polyprenyl synthetase [Prevotella bergensis DSM 17361] Length = 325 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 19/230 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 E ++I++ ++ L + L ++Y L +GGK+IR L+ +L+ + Sbjct: 6 DEILQKINSFIEQL-------PYDRTPAALYEPVKYVLSMGGKRIRPTLMLLGYNLYKDD 58 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + L +E H Y+L+HDDL MDN +RRG TVH +++ A+++G+ +L A+ Sbjct: 59 PESILMQAVGLETYHNYTLLHDDL--MDNADLRRGHETVHKKWNANQAVLSGDSMLVLAY 116 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKT 185 + + + + + GQ DI E + E + + ++KT Sbjct: 117 QRMMDCPVDKLEKVLGLF------TETALEIGEGQQYDIDFEMRNDVSEDEYIEMIRLKT 170 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ A + GAI+A AS ++ ++L FGE +G+ FQL DD LD D Sbjct: 171 SVLLACALKIGAILAGASPSDADKLYKFGEKMGLAFQLQDDYLDVYGDEK 220 >gi|32471772|ref|NP_864766.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula baltica SH 1] gi|32397143|emb|CAD72450.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula baltica SH 1] Length = 317 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 82/242 (33%), Positives = 117/242 (48%), Gaps = 18/242 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 N L + ++ L Q A + +RL +AIRYA L GK++R L Sbjct: 17 NESLKDYMDARRPAVEAAL-----QAACEDRPGVPERLAAAIRYAVLAPGKRLRPMLTIM 71 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + +A+ A+E IH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+AG Sbjct: 72 AAEACGGDAESAMPSAVAVEMIHAYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAG 131 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---- 176 + L + AF + + + + L+ +L G G++GGQ D+ E Sbjct: 132 DALQSMAFAHLHHSTSDATKS--AALIGTLATAAGPAGLVGGQADDLDAEKYTVEDFGGA 189 Query: 177 ------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + I KTGAL GAI A A N L + + G+ FQ+ DDLLDC Sbjct: 190 DAALKHLEAIHHRKTGALFTACAAMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDC 249 Query: 231 EE 232 Sbjct: 250 TS 251 >gi|256957073|ref|ZP_05561244.1| polyprenyl synthetase [Enterococcus faecalis DS5] gi|256947569|gb|EEU64201.1| polyprenyl synthetase [Enterococcus faecalis DS5] gi|315034211|gb|EFT46143.1| geranyltranstransferase [Enterococcus faecalis TX0027] Length = 293 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 88/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKTAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G I+A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGILANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|15645545|ref|NP_207721.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695] gi|2314066|gb|AAD07974.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695] Length = 303 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71 + L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SNA--LLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 192 SASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238 >gi|320540162|ref|ZP_08039817.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str. Tucson] gi|320029828|gb|EFW11852.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str. Tucson] Length = 333 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 65/214 (30%), Positives = 115/214 (53%), Gaps = 11/214 (5%) Query: 22 DLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAA 78 D++ A+ ++ H+D L++ + Y ++ GGK+IR + A N + V A Sbjct: 23 DMMAVNAAILEQLHSDVTLINQLCYYIISGGGKRIRPMIAVLAARALNYEGNKHVTVAAL 82 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T AF++++S K+ Sbjct: 83 IEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLKS-- 138 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 +R ++S N+ +G + Q++++ D I E + KT L A +S AI Sbjct: 139 ---LRVLALMSEAVNVIAEGEVL-QLMNVHDPDITEESYMQVIYSKTARLFEAAAQSSAI 194 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ A+Q E++ L+ +G LG FQL DDLLD Sbjct: 195 LSGANQAEEKALQDYGRYLGTAFQLIDDLLDYSA 228 >gi|114566224|ref|YP_753378.1| trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337159|gb|ABI68007.1| Trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 322 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 23/225 (10%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 QE SK++D+ + +LL ++A H+ GGK++R A + + Sbjct: 19 QELSKKLDSRI-ELLNESAVHLIK--------------AGGKRLRPAFALLSAHFYMDDL 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + + +E IH SL+HDD+ +DN RRG TV + +I AG+ + A Sbjct: 64 TEVIPLAVGLELIHMASLVHDDV--IDNSQTRRGTETVKSAWGNRVSIYAGDFIFARALS 121 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 +I++ + ++ ++ + + + QM+ + + + KT L+ Sbjct: 122 LIATYERSNVVDVLAEASMKICEGEII------QMMSCYNVKLGLKNYLRRIERKTALLI 175 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 +C+ GA++A+A + E LR +G LG+ FQ+ DD+LD D Sbjct: 176 SVSCQLGAMIANAPEQEVRALRNYGYYLGMAFQVTDDILDIIADE 220 >gi|326574817|gb|EGE24747.1| geranyltranstransferase [Moraxella catarrhalis 101P30B1] Length = 326 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 80/254 (31%), Positives = 124/254 (48%), Gaps = 24/254 (9%) Query: 7 SKLQENSKRIDTILD---DLLLQTASHMQTQH--NDRLLSAIRYALL-GGKKIRSFLVTE 60 + +N+K +D + + L + + TQ + L +A RYA+ GGK +R L Sbjct: 15 TAFIQNAKHLDQVRQWQTEHLPKLLDLILTQASLPEPLNAACRYAMSNGGKHVRPLLALS 74 Query: 61 CASLF--NVNHLTAL-----------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 + +H R A+E IH YSLIHDDLP MD+ +RRG+PT Sbjct: 75 TFLMLIQTGDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTC 134 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 HI Y E A++AG+ L + AFE++ + + L+ + + M+ GQMLDI Sbjct: 135 HIVYGEDIALLAGDALQSIAFEVLFECYDKNSADDAIAYKLAKLLSCRARRMVSGQMLDI 194 Query: 168 QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 + E + + ++ I + KTGAL+ A GAI A + L+ + +G+ FQ+ D Sbjct: 195 KGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYLKHYARAIGLAFQVQD 254 Query: 226 DLLDCEED---LPK 236 D+LD D L K Sbjct: 255 DVLDITADTITLGK 268 >gi|150026434|ref|YP_001297260.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86] gi|149772975|emb|CAL44459.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86] Length = 324 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 15/222 (6%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 ++ D + T+ L + I Y L LGGK++R L +F+V+ +L Sbjct: 6 HYQELISDYFSELHL---TKEPKNLYNPIDYILSLGGKRMRPILTLMATEVFDVDCKKSL 62 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 AIE H +SL+HDD+ MD+ +RRG TVH +++ T I++G+ +L A++ Sbjct: 63 AAATAIEIFHNFSLVHDDI--MDDAPLRRGNETVHEKWNINTGILSGDAMLILAYQHFEE 120 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190 + ++ + L+ + + GQ D+ E D+ + + + KT L+ Sbjct: 121 YEPKIFRD------LAKLFSKTALEVCEGQQYDVDFETRDDVIIAEYLKMIEYKTAVLVG 174 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A + GAI+A S + FG NLGI FQL DD LD Sbjct: 175 AAMKMGAIVAQTSTENANLIYDFGLNLGIAFQLQDDYLDAFG 216 >gi|317121083|ref|YP_004101086.1| polyprenyl synthetase [Thermaerobacter marianensis DSM 12885] gi|315591063|gb|ADU50359.1| Polyprenyl synthetase [Thermaerobacter marianensis DSM 12885] Length = 331 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 17/231 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61 G + ++++ ++ + L H ++ Y GG K++R L+ Sbjct: 14 GAVFEPIRDDLAGVEVAIRRALDGPDPH--------IVELATYLQRGGGKRLRPALLLLT 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A F+ + L V AA+E IH +L+HDD+ +D RRG PTV++++ TA++ G+ Sbjct: 66 ARNFHYDRERLLPVAAAVELIHMATLVHDDI--VDGATSRRGLPTVNVRWGTGTAVLTGD 123 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L AF ++++ R +++ G + Q + D E + Sbjct: 124 FLFARAFSLLAADGDN-----RVVRVMAEAVYEMSTGEIEQQ-AQLFDPAAGEEGYYRRI 177 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT + C G +M A + + E LR +G +G+ FQ+ DD+LD Sbjct: 178 YKKTAHFISHCCLMGGLMGGAPERQVEALRRYGYGIGMGFQVIDDILDLTG 228 >gi|309783042|ref|ZP_07677761.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA] gi|308918150|gb|EFP63828.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA] Length = 325 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 110/228 (48%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + E+ + +D ++ L + Q + ++SA GGK++R ++ A+ Sbjct: 9 LLAPVAEDMRAVDAVIRRRLGSEVV-LINQIGEYIISA------GGKRLRPVILLLVANA 61 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 62 LGYKGEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTANAVFGNAASVLVGDFLY 119 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + AF+++ + +R +L+ NI +G + Q+L++ D + E + + + K Sbjct: 120 SRAFQMMVQANS-----MRIMQILADATNIISEGEVL-QLLNMHDPDVTEERYLQVIRYK 173 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T L A + GA+++ A +E +G +G FQ+ DDLLD Sbjct: 174 TAKLFEAAAQIGAVLSGADAATEEAAAEYGRRIGTAFQIVDDLLDYTS 221 >gi|307822417|ref|ZP_07652649.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96] gi|307736983|gb|EFO07828.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96] Length = 298 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 125/241 (51%), Gaps = 12/241 (4%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M+ L L R++ LD L ++ +L A+RY+ L GGK++R L Sbjct: 1 MSNALKDYLDFCQNRVERALDARLPS-----ESILPQKLHRAMRYSTLDGGKRMRPMLTY 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + A+E IH YSLIHDDLP+MD+ +RRGK T H+ +DE TAI+ Sbjct: 56 CTGKTLGIAPEALDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKATCHVAFDEATAILT 115 Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L AFEI++ P R +++++LT G QGM+GGQ +D++ + + Sbjct: 116 GDALQALAFEILANDPSITATAEGRLKMIIALTKASGSQGMVGGQAIDLESVGTKLTLPE 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + + KTGAL+ + A +A A + ++L + + +G+ FQ+ DD+LD E D Sbjct: 176 LENMHIHKTGALIRASVNM-ATLAKADIDPDVAKKLDNYAKCIGLSFQVKDDILDEESDT 234 Query: 235 P 235 Sbjct: 235 A 235 >gi|323495811|ref|ZP_08100879.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326] gi|323319027|gb|EGA71970.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326] Length = 323 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A ++ + L+ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPEDVERALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|210135119|ref|YP_002301558.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12] gi|210133087|gb|ACJ08078.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12] Length = 303 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 122/231 (52%), Gaps = 15/231 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV----- 67 +R ++ L+ L H+++ H + L GGK+ R L SL Sbjct: 14 ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSN 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+ Sbjct: 70 QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S+ L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT Sbjct: 130 FELLSNA--LLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKT 187 Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + G + + E + L+ FG G+ FQ+ DD++D +D Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238 >gi|238797569|ref|ZP_04641066.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969] gi|238718566|gb|EEQ10385.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969] Length = 323 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALHYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLES-----LRVLTLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A++A+AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLANASEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|330719242|ref|ZP_08313842.1| geranyltranstransferase [Leuconostoc fallax KCTC 3537] Length = 292 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 127/237 (53%), Gaps = 18/237 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L + + ++D L+ L Q ++ L + ++YA+L GGK++R L Sbjct: 3 ELEKFINKWRPKVDQQLEQDLNQA------TLDEDLNAMMKYAVLNGGKRLRPLLTLAVV 56 Query: 63 SLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 F L+ +A+E IH YSL+HDDLP+MDN +RRGKP+VH + E I+ G+ Sbjct: 57 QSFGRTITADILKAASAVEWIHSYSLVHDDLPAMDNDTMRRGKPSVHALFGEANGILVGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ----- 176 LLT AF I+S ++ R L+ +L+ G GM+ GQ+ D+++ + Sbjct: 117 ALLTGAFAILSDSRSNEDVQTRLDLIQALSALAGGYGMVYGQVNDMRNHNNTDDNNADIG 176 Query: 177 ----VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 + + + KT AL+ +A E+GA++A ++ + LR FG++ G+ +Q+ DD+ D Sbjct: 177 VDWLLSAVHRPKTAALLTYASEAGAMLAQQ-RSVQTHLRQFGDSFGVAYQIQDDIDD 232 >gi|215488503|ref|YP_002330934.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str. E2348/69] gi|215266575|emb|CAS11014.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str. E2348/69] Length = 323 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAIGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|325955638|ref|YP_004239298.1| polyprenyl synthetase [Weeksella virosa DSM 16922] gi|323438256|gb|ADX68720.1| Polyprenyl synthetase [Weeksella virosa DSM 16922] Length = 323 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 72/237 (30%), Positives = 116/237 (48%), Gaps = 24/237 (10%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 ++E + ID ++ ++ + L I Y L +GGK+IR +V +FN Sbjct: 4 IEELHQIIDQAIE-------KNLDIKSPRELYEPIEYILGIGGKRIRPLIVLMGNQMFNG 56 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A++ A+E H ++L+HDD+ MD+ +RRGK VHI+Y +AI++G+ +L A Sbjct: 57 LIEDAVKPAIAMEYFHNFTLMHDDI--MDSAPLRRGKEAVHIKYGINSAILSGDTMLIRA 114 Query: 128 FEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183 +E++ + K+ IR N + GQ D+ E I + + K Sbjct: 115 YELLEDLPNDVFKEAIRL-------FNKTAIELCEGQQYDVNYETQKEISFEDYYKMIKG 167 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237 KT L+ + GA++A A + E +RL G NLGI +QL DD LD + KK Sbjct: 168 KTAVLVGACLKLGALIAGAPKEEADRLYEIGLNLGIAYQLKDDYLDVFGTSVKIGKK 224 >gi|317152625|ref|YP_004120673.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316942876|gb|ADU61927.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 297 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 81/225 (36%), Positives = 127/225 (56%), Gaps = 12/225 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + +L E + ++ L+ L D LL A+ Y+LL GGK++R L A+ Sbjct: 3 IKGRLAERALGVEKYLEGCLRNRGI------PDSLLQAMEYSLLAGGKRLRPVLTLAWAT 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + + A++ECIH YSLIHDDLP+MD+ +RRG+P+ H +YDE TAI+AG+GL Sbjct: 57 MLGGDAERVMPFAASLECIHTYSLIHDDLPAMDDDDLRRGRPSNHKRYDEATAILAGDGL 116 Query: 124 LTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178 LT +F +++ L + + L G GM+GGQ +D++ E ++ Sbjct: 117 LTESFVLMTEASLIRGLPAERVLRAVSVLAVAAGSGGMVGGQAVDMEFTGRAEVALDELR 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + MKTGAL+ ACE GA++A AS+ + E R +G +G+ FQ+ Sbjct: 177 AMHAMKTGALITAACECGAVLAGASERDVENAREYGRAVGVAFQI 221 >gi|311068789|ref|YP_003973712.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus 1942] gi|310869306|gb|ADP32781.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus 1942] Length = 320 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 13/225 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 ++ +D + + +++ + L A + L GGK+IR V N + Sbjct: 10 LNDDIDIIEKELEQTVRSDYP-LLSEAGLHLLQAGGKRIRPVFVLLSGMFGNYDINKIKY 68 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V +E IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+ +L + E+++ Sbjct: 69 VAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRI 126 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 I SQ ++ + Q+ D + + K KT L+ +C+ Sbjct: 127 NEPKAHRILSQTIVEVCLGEI------EQIKDKYNMEQNLRTYLRRIKRKTAILIAVSCQ 180 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 GAI + A + + L FG +G+ +Q+ DD+LD EE+L K Sbjct: 181 LGAIASGADEKVHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 225 >gi|325846498|ref|ZP_08169413.1| putative geranyltranstransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481256|gb|EGC84297.1| putative geranyltranstransferase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 279 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 7/223 (3%) Query: 12 NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN- 68 N K D IL D ++ A + ++ L A+ YA GK+IR + E + + Sbjct: 5 NKKEFDRILNTDKKIIDQAMKEKFVGDNPLNEALVYASDSGKRIRPIVFLETCRMLLGDK 64 Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + ++E +H YSL+HDD+P MDN RRGK TVH ++ E AI+ G+ LL++A Sbjct: 65 LDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAILVGDSLLSFA 124 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTG 186 FE I ++D + L G GM+ GQ+ DI+ ++ + + + + K KT Sbjct: 125 FENI--LNLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSYILDVYKNKTS 182 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L A + + E+L + LG+ FQL DD+LD Sbjct: 183 RLFMAALMMAGLYCQLDDEKLEKLENYAYYLGMAFQLQDDILD 225 >gi|329770468|ref|ZP_08261847.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325] gi|328836323|gb|EGF85989.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325] Length = 286 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 72/239 (30%), Positives = 123/239 (51%), Gaps = 13/239 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59 MN + EN ++ + + + + L +I Y+L+ GKKIR Sbjct: 1 MNS-FEQFINENRNSLNIYAKEYIENL------EIPELLKESIIYSLVNDGKKIRPLSFL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +N+++ V AIE +H YSL+HDDLP MDN R GKPT H Y + A++ Sbjct: 54 YLLKFYNIDYKEYFDVALAIELVHTYSLVHDDLPEMDNDDYRWGKPTNHRVYGQDIAVLT 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 G+ +LT AFE++S K+ + D ++ L+ + G GM+ GQ+ D ++ +D + Sbjct: 114 GDSMLTLAFEVLS--KSNINDTLKVNLIQQFANYSGAMGMIAGQVYDVKQKNYQVDANYL 171 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++ +KTG L+ + +A +++ + +R FG+ LGI +Q+ DD+LD + K Sbjct: 172 KLMHSLKTGRLIELPLDFACKIAR-KESDLDYIRSFGKELGIAYQIKDDILDYYGEFEK 229 >gi|304396333|ref|ZP_07378214.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB] gi|308189085|ref|YP_003933216.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1] gi|304355842|gb|EFM20208.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB] gi|308059595|gb|ADO11767.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1] Length = 323 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLSARAMGYKGDLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + +R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSMGS-----LRILALMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A ++ AI+A A+ E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAASQASAILAEATPEEEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|262275074|ref|ZP_06052885.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] gi|262221637|gb|EEY72951.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Grimontia hollisae CIP 101886] Length = 323 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPMLAVLSGRALGYQGEGHITAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ ++ +R ++S N+ +G + Q+++ Sbjct: 101 AMFGNAASVLVGDYIYTRSFQMMTELRS-----LRILDLMSKATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+A AS+ + ++ +G LG FQL DD++ Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILADASEEIETAMQDYGRYLGTAFQLIDDVM 214 Query: 229 DCEE 232 D Sbjct: 215 DYTS 218 >gi|207091726|ref|ZP_03239513.1| geranyltranstransferase [Helicobacter pylori HPKX_438_AG0C1] gi|207108226|ref|ZP_03242388.1| geranyltranstransferase [Helicobacter pylori HPKX_438_CA4C1] Length = 303 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 116/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71 + L H++ H + L GGK+ R L +L Sbjct: 14 ERFESFLKNHHLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SNA--LLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + E + L+ FG G+ FQ+ DD++D +D Sbjct: 192 SASLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238 >gi|261250197|ref|ZP_05942773.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] gi|260939313|gb|EEX95299.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio orientalis CIP 102891] Length = 345 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 65 GGKRIRPLLAVLSARALGYQGEAHTTSAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 122 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 123 AAFGNAASVLVGDFIYTRSFQMMTELGS-----LKILKLMSDAVNVIAEGEV-QQLMNCN 176 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + KT L A + GAI+ A ++ + L+ +G+ LG FQL DD++ Sbjct: 177 NPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPEDVELALQNYGKYLGTAFQLIDDVM 236 Query: 229 DCEED 233 D D Sbjct: 237 DYTSD 241 >gi|56461237|ref|YP_156518.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] gi|56180247|gb|AAV82969.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] Length = 295 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 85/233 (36%), Positives = 130/233 (55%), Gaps = 11/233 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 + S +++D+ L L Q N RL A+++ L+GGK+IR +L+ A Sbjct: 3 INSLTAATREQVDSFLKQALAQL------TLNPRLNQAMQHGVLMGGKRIRPYLLVTVAD 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + N AL+ AA+E IH YSLIHDDLP+MD+ +RRG+PT HI YDE TAI+AG+ L Sbjct: 57 ICGANKNDALQAAAAVELIHAYSLIHDDLPAMDDDDLRRGQPTCHIAYDEATAILAGDAL 116 Query: 124 LTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180 T AFE+++ + + L + QL+ L G +GM GQ +D+Q + + E + + Sbjct: 117 QTLAFEVLTENRMEQLPSERQLQLVQVLAKASGARGMCAGQAIDLQATAKIVTEDALEQM 176 Query: 181 QKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEE 232 KTGAL+ A G + + + + +E+ F LG+ FQ+ DD+LD Sbjct: 177 HLSKTGALITAAATMGVLCGNDNAQQWREKFEQFAHYLGLAFQVQDDILDVTG 229 >gi|20429105|emb|CAD24417.1| decaprenyl diphosphate synthase [Paracoccus zeaxanthinifaciens] Length = 333 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 9/233 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 + + L ++ + ++ + M ++H R+ + + GGK++R L Sbjct: 3 VQEDVRKPLDRLAEALAPEMEAVNALIRERMASRHAPRIPEVTAHLIEAGGKRLRPMLTL 62 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A L + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ Sbjct: 63 AAAKLLGYGGPYHVHLAATVEFIHTATLLHDDV--VDESRQRRGRPTANLLWDNKSSVLV 120 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L +F+++ P + +R+ +LS +G + Q+ QD +E Sbjct: 121 GDYLFARSFQLMVEPGS-----MRTLEILSNAAATIAEGEVL-QLTAAQDLATNEDIYLQ 174 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + KT AL A E G ++A + L +G+ LGI FQ+ DDLLD Sbjct: 175 VVRGKTAALFSAATEVGGVIAGVPDAQVRALFDYGDALGIAFQIVDDLLDYGG 227 >gi|332877798|ref|ZP_08445537.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684263|gb|EGJ57121.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 327 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 108/227 (47%), Gaps = 14/227 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 +LD + + A + L + IRY L +GGK+IR L+ +L+ Sbjct: 6 ELLDYINGEIAGMSFERQPAELYAPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEVIGSQA 65 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE H Y+L+HDDL MD +RRG TVH ++D+ AI++G+ +L A+ + Sbjct: 66 MAIEIYHNYTLLHDDL--MDRADMRRGMATVHKKWDDNAAILSGDSMLVMAYRYMQQ--- 120 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFAC 193 +M T G GQ DI+ E + E + + ++KT L+ A Sbjct: 121 GCPVEQLGNVMGLFTETALEIGE--GQQYDIEFETRADVSEEEYIEMIRLKTSVLLACAL 178 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GA + A + + E L FGENLG+ FQL DD LD D KK Sbjct: 179 KIGAWLGDAPRQDAELLYRFGENLGLAFQLQDDYLDVYGDPAVFGKK 225 >gi|292659743|pdb|3LLW|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter Pylori 26695 gi|292659744|pdb|3LLW|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter Pylori 26695 gi|292659745|pdb|3LLW|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter Pylori 26695 gi|292659746|pdb|3LLW|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter Pylori 26695 Length = 311 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71 + L H+++ H + L GGK+ R L +L Sbjct: 16 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 75 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 76 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 135 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 136 SNA--LLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 193 Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 194 SASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 240 >gi|257081234|ref|ZP_05575595.1| polyprenyl synthetase [Enterococcus faecalis E1Sol] gi|256989264|gb|EEU76566.1| polyprenyl synthetase [Enterococcus faecalis E1Sol] Length = 293 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVDFITEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|258405879|ref|YP_003198621.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692] gi|257798106|gb|ACV69043.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692] Length = 292 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 84/234 (35%), Positives = 128/234 (54%), Gaps = 12/234 (5%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64 +L+ + +++ L+ L + L ++RY+LL GGK++R L A L Sbjct: 3 KQRLELYRREVESFLEQCLDAR------RMPATLYESMRYSLLAGGKRVRPVLCLVWAEL 56 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + L + +ECIH YSL+HDDLP+MD+ +RRGKP+ H Q+ E AI+AG+GLL Sbjct: 57 LGGDRQAVLPFASGLECIHTYSLVHDDLPAMDDDDLRRGKPSNHKQFGEAMAILAGDGLL 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQ 181 T+AFE++ L + + G GM+GGQ+ DIQ + + + Sbjct: 117 THAFELM--LHADLPAERLVRAAGLVAGAAGASGMIGGQVTDIQLTGSGATNVEDLRAMH 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 MKTGAL+ AC SGA++A A + + +R +G LG+ FQ+ADD+LD D Sbjct: 175 GMKTGALLQVACTSGAVLAGAIEEDIQRAATYGGALGLAFQVADDILDVVGDEA 228 >gi|83311261|ref|YP_421525.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] gi|82946102|dbj|BAE50966.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum AMB-1] Length = 339 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 15/230 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L + ++++ ++++ + D + M Q +++A GGK++R L A Sbjct: 19 DALVALVKDDLQKVNHAIVDRMHSPV-EMIPQLAGHIIAA------GGKRLRPVLTLASA 71 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L +++ A +E IH +L+HDD+ +D +RRG+ + + + +++ G+ Sbjct: 72 KLAGHTGERHIKLAACVEFIHTATLLHDDV--VDESELRRGQASANALFGNKPSVLVGDF 129 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L + +FE++ + + +LS ++ +G + Q++ D E + + Sbjct: 130 LFSRSFELMVEDGS-----LSVLAILSRASSVIAEGEVL-QLITANDTETSEDSYLEVIR 183 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT AL AC GA++A + E+E L +G NLGI FQL DD+LD Sbjct: 184 SKTAALFAAACRIGAVVADRPKVEEEALESYGLNLGIAFQLIDDVLDYSA 233 >gi|319789063|ref|YP_004150696.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] gi|317113565|gb|ADU96055.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1] Length = 324 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 11/225 (4%) Query: 14 KRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 K + + ++LL + + + + +L A Y L GGK++R L L Sbjct: 5 KPFEVVREELLSVEEFSRELLSSKVSLVLRAGGYILDSGGKRVRPGLTVIAGKLVEAPLD 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + V +E +H +L+HDD+ +D +RRG+P+V+ + A++ G+ + A + Sbjct: 65 RLIPVATVMEYMHTATLLHDDI--VDGAKLRRGRPSVNAVFGNDVAVLVGDYMFAKAIYV 122 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 ++ ++ + + L Q+ I D + E + F I KT +L+ Sbjct: 123 LAVYGGPEVLKTAAKTVQDMAEGELL------QLEKIGDINLTEEEYFDIIYRKTASLLS 176 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 CE GAI+ AS+ E++ L+ +G +G FQL DD D D Sbjct: 177 TCCECGAIVGGASEKERKALKDYGTYIGYAFQLVDDAFDYISDEK 221 >gi|222444999|ref|ZP_03607514.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii DSM 2375] gi|222434564|gb|EEE41729.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii DSM 2375] Length = 335 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 7/204 (3%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L A Y GGK +R L + + +L+ AAIE IH +SLIH Sbjct: 32 PNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIH--DDI 89 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRGKP VH +DE AI+AG+ L + AFEII + + + L+ T Sbjct: 90 MDDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNTPTQLSQTLA-TVAD 148 Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + GQ D+ E + E + + KTGAL+ A ++GAIM A+Q + + Sbjct: 149 ACVKICEGQASDMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMY 208 Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235 +G +G+ FQ+ DD LD D Sbjct: 209 DYGRLIGLAFQIQDDYLDLASDEE 232 >gi|29375563|ref|NP_814717.1| geranyltranstransferase [Enterococcus faecalis V583] gi|227555091|ref|ZP_03985138.1| geranyltranstransferase [Enterococcus faecalis HH22] gi|257418572|ref|ZP_05595566.1| polyprenyl synthetase [Enterococcus faecalis T11] gi|29343024|gb|AAO80787.1| geranyltranstransferase [Enterococcus faecalis V583] gi|227175759|gb|EEI56731.1| geranyltranstransferase [Enterococcus faecalis HH22] gi|257160400|gb|EEU90360.1| polyprenyl synthetase [Enterococcus faecalis T11] gi|315168053|gb|EFU12070.1| geranyltranstransferase [Enterococcus faecalis TX1341] Length = 293 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|310943001|pdb|3P8L|A Chain A, Crystal Structure Of Polyprenyl Synthase From Enterococcus Faecalis V583 gi|310943002|pdb|3P8L|B Chain B, Crystal Structure Of Polyprenyl Synthase From Enterococcus Faecalis V583 Length = 302 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 88/241 (36%), Positives = 136/241 (56%), Gaps = 15/241 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L + Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV Sbjct: 9 SLTNFSQQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTV 62 Query: 63 SLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + F T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+ Sbjct: 63 AAFQKEMETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGD 122 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179 GLLT AF+++S + L + + L G QGM+ GQM DI+ E + ++ Sbjct: 123 GLLTGAFQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVSGQMGDIEGEKVSLTLEELAA 180 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + + KTGAL+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD E DL K Sbjct: 181 VHEKKTGALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGK 240 Query: 237 K 237 K Sbjct: 241 K 241 >gi|114564252|ref|YP_751766.1| trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB 400] gi|114335545|gb|ABI72927.1| Trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB 400] Length = 323 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLSVLAARTVDYQGEHHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ +N++ +L+ T N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTEL-----ENMKVLQVLAHTTNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + ++A+ S +++ L +G+ LG FQL DDLL Sbjct: 155 DPDTTEANYMRVIYCKTAKLFEAATQLAGVLANVSPEQEQALADYGKYLGTAFQLTDDLL 214 Query: 229 DCEE---DLPK 236 D +L K Sbjct: 215 DYTANADELGK 225 >gi|317182228|dbj|BAJ60012.1| geranyltranstransferase [Helicobacter pylori F57] Length = 303 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71 + L H ++ H + L GGK+ R L +L Sbjct: 14 ERFESFLNHHHLHFESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALGIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ + L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 192 SASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238 >gi|302383899|ref|YP_003819722.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302194527|gb|ADL02099.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 301 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 90/233 (38%), Positives = 134/233 (57%), Gaps = 6/233 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62 + ++ E + + LD+LL + RL A+RYA LG GK++R + E + Sbjct: 11 SVADRVAEVADMVTVALDELLPRADGP-----EVRLTEAMRYAALGPGKRLRPYFAMEAS 65 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF++ LR A+EC+H YSL+HDDLP MD+ +RRG+PT+H YDE TA++AG+ Sbjct: 66 RLFDIEERPVLRAACALECVHAYSLVHDDLPCMDDDDMRRGRPTLHRAYDEATAVLAGDA 125 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L T AF+I+ T NIR L L+ G +GM GGQM+D+ D V +Q+ Sbjct: 126 LQTAAFDILLHEDTHEDANIRCALAARLSLASGARGMAGGQMVDLLGVRDDLEGVARMQR 185 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +KTGAL +A E I+A A++ + L F ++G+ +Q+ DDLLD + D Sbjct: 186 LKTGALFTYAFEIPLIVARANERHCQALTDFAHDIGLAYQIVDDLLDFDGDEA 238 >gi|325281282|ref|YP_004253824.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712] gi|324313091|gb|ADY33644.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712] Length = 325 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 62/229 (27%), Positives = 114/229 (49%), Gaps = 15/229 (6%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74 I+ + + + + + L I+Y + GGK++R L +L+ + AL+ Sbjct: 5 IEQLREVIKAELDKQEYVEEPYSLFEPIKYIMEDGGKRLRPVLTLMAYNLYRDDIGKALK 64 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 IE H Y+L+HDD+ MD+ +RRG+ TVH +++ AI++G+ A++ I + Sbjct: 65 SAIGIEIFHNYTLLHDDV--MDDAELRRGRQTVHKKWNSNVAILSGDAAAITAYKYIETC 122 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCF 191 ++ + ++ + + + + GQ D++ E D E + + +KT L+ Sbjct: 123 -----EDPYLRRVIDGFNQVAMD-VCKGQQYDMEFETRDDVTEEEYIQMIYLKTSVLIAG 176 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + GA++A A ++E + L FG LG++FQL DD LD D KK Sbjct: 177 SMRHGALIAGAPEHEYKELYDFGGYLGLVFQLQDDYLDVYGDVEEFGKK 225 >gi|270157822|ref|ZP_06186479.1| geranyltranstransferase [Legionella longbeachae D-4968] gi|289163911|ref|YP_003454049.1| geranyltranstransferase [Legionella longbeachae NSW150] gi|269989847|gb|EEZ96101.1| geranyltranstransferase [Legionella longbeachae D-4968] gi|288857084|emb|CBJ10899.1| geranyltranstransferase [Legionella longbeachae NSW150] Length = 293 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 5/197 (2%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + SAI Y+L GGK+IR LV SL +V+ + AA+E HCYSLIHDDLP+MDN Sbjct: 27 IRSAIDYSLFPGGKRIRPILVYLTGSLLDVDLNILDAIAAAVELTHCYSLIHDDLPAMDN 86 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNIGL 156 +RRG+P+ H +DE TAI+AG+G+ A +++ + L R + L G+ Sbjct: 87 DDLRRGRPSCHKAFDEATAILAGDGMQALAIDVLLTYLPHLVQPDRIISITRELVQATGI 146 Query: 157 QGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213 GM+ GQ LD+ + ID+ ++ I +KTG L+ E + + + LR + Sbjct: 147 SGMVSGQSLDLSELAKSSIDDERLKEIHHLKTGRLILACIEMVLRIQSTPEAYQSALRTY 206 Query: 214 GENLGIIFQLADDLLDC 230 ++G++FQ+ DD LD Sbjct: 207 ANHIGLVFQMQDDYLDY 223 >gi|312963291|ref|ZP_07777774.1| geranyltranstransferase [Pseudomonas fluorescens WH6] gi|311282371|gb|EFQ60969.1| geranyltranstransferase [Pseudomonas fluorescens WH6] Length = 295 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 78/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + + + R++ L+ L + + M+ RL A+RY+++ GGK++R L Sbjct: 2 IDAYQASSQARVNAALEPLFVAPSPQMK-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGL 116 Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180 + AF + P + + IR +++ +L G GM+GGQ +D+ +D+ + + Sbjct: 117 QSLAFSALLDPGLSSVNAEIRLRMVTALALAAGPAGMVGGQAIDMGSVSLKLDQQALEHM 176 Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + KTGAL+ A + GA+ + A + L+ + +G+ FQ+ DD+LD E D L K Sbjct: 177 HRHKTGALIEAAVQLGALASGRAEAAQLAALQTYARAIGLAFQVQDDILDVESDTATLGK 236 Query: 237 K 237 + Sbjct: 237 R 237 >gi|213417843|ref|ZP_03350948.1| geranyltranstransferase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 268 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 123/207 (59%), Gaps = 8/207 (3%) Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP+MD+ Sbjct: 1 MVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDD 60 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156 +RRG PT HI++ E AI+AG+ L T AF IIS P ++ D R ++ L + G+ Sbjct: 61 DDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANASGI 120 Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213 GM GGQ LD+ E I + I + KTGAL+ A GA+ A +N L + Sbjct: 121 AGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRY 180 Query: 214 GENLGIIFQLADDLLDCEED---LPKK 237 E++G+ FQ+ DD+LD D L K+ Sbjct: 181 AESIGLAFQVQDDILDVVGDTATLGKR 207 >gi|300721522|ref|YP_003710797.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC 19061] gi|297628014|emb|CBJ88563.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC 19061] Length = 323 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + ++V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAGKALQCGDEKHIKVAALIEFIHTATLLHDDV--VDESDMRRGKETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 Y +++ G+ + T +F++++ D++R ++S N+ +G + Q+++ Sbjct: 101 AIYGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSDATNVIAEGEVM-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A S AI+A+A+ ++ LR +G LG FQL DDLL Sbjct: 155 DPDISEDDYMRVIYSKTARLFEVAAHSAAILANATPEQEIALRDYGCYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDSD 219 >gi|262164113|ref|ZP_06031852.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] gi|262027641|gb|EEY46307.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus VM223] Length = 323 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAVLSAKALGYQGSNHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|150401609|ref|YP_001325375.1| polyprenyl synthetase [Methanococcus aeolicus Nankai-3] gi|150014312|gb|ABR56763.1| Polyprenyl synthetase [Methanococcus aeolicus Nankai-3] Length = 320 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 12/216 (5%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 L ++ + Q +L A ++ L GGK+IR +L L + L ++E Sbjct: 10 LKIEEELNRQVNKEGKLYEASKHLLFAGGKRIRPYLSVLTYLLKKDDIDEVLTPAVSVEL 69 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH YSLIHDD+ MDN RRGKPTVHI Y E AI+AG+ L T AF IS + K + Sbjct: 70 IHGYSLIHDDI--MDNDSERRGKPTVHIVYGEPIAILAGDLLNTLAFNAISQMENLEKAH 127 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGA 197 +++ + + GQ D++ E + F + KTGAL+ E GA Sbjct: 128 EILKIV-----SKASVKVCEGQATDMEFEEREVIPTIDEYFDMISKKTGALIVAPIEIGA 182 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +MA ++ E++ + + + +G+ FQ+ DD+LD D Sbjct: 183 VMADFTEEERKAICEYAKRIGMTFQIQDDVLDLIGD 218 >gi|23099243|ref|NP_692709.1| heptaprenyl diphosphate synthase component II [Oceanobacillus iheyensis HTE831] gi|22777472|dbj|BAC13744.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Oceanobacillus iheyensis HTE831] Length = 323 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 18/231 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 L+++ + I++ L D + ++ + L + GGK+IR V + L N + Sbjct: 10 LKKDMESIESALQDSIQANHPVLRDASTELLHA-------GGKRIRPVFVLLSSQLGNYD 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 +V +E IH +L+HDD+ +D +RRGKPT Y A+ G+ +L A Sbjct: 63 LSKIKKVAVTLELIHMATLVHDDV--IDEAELRRGKPTTASIYGNRVAMYTGDYILARAL 120 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E I+ + R +LS T G + Q+ + + K KT L Sbjct: 121 EEITEI-----PDPRVHQLLSKTLVEVSIGEIE-QIEYKFNWEQNFRDYLRRIKRKTALL 174 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + +C+ GAI+ + + +L +G +G+ +Q+ DD+LD +L K Sbjct: 175 IASSCKLGAIVGGLNDYQTNKLYQYGYYIGMSYQIIDDILDFTSTSKELGK 225 >gi|288960115|ref|YP_003450455.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510] gi|288912423|dbj|BAI73911.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510] Length = 342 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 15/230 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L + + E+ ++ I+ D + Q+ M Q L++A GGK++R L A Sbjct: 22 DDLTALVAEDLSAVNQIILDRM-QSQVEMIPQLAGYLIAA------GGKRLRPVLTLAAA 74 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +L + A +E IH +L+HDD+ +D +RRG + + + +++ G+ Sbjct: 75 NLCGYQGEHHRLLAAVVEFIHSATLLHDDV--VDESDLRRGMASANAVFGNKASVLVGDF 132 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L + AFE++ ++ + +LS I +G + Q+ D E + K Sbjct: 133 LFSRAFEMMVEVQS-----LDVLRILSGASAIIAEGEVL-QLRTTNDTETSEQAYLEVIK 186 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L AC GA++A+ Q E+ L +G NLGI FQL DD+LD Sbjct: 187 GKTAELFAAACRVGAVVANRPQAEELALYDYGMNLGIAFQLVDDVLDYSA 236 >gi|110833312|ref|YP_692171.1| transferase [Alcanivorax borkumensis SK2] gi|110646423|emb|CAL15899.1| transferases [Alcanivorax borkumensis SK2] Length = 307 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 13/216 (6%) Query: 26 QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84 Q SH + + Y + GGK++R + CA + V A IE +H Sbjct: 3 QFISHHLDSNVPLIREVGDYIIQSGGKRLRPLIAVLCARASGYQGSRHVDVAAIIEFLHT 62 Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144 +L+HDD+ +D +RRG+PTV+ + +++ G+ L++ A +++ + + + R Sbjct: 63 ATLLHDDV--VDESNLRRGRPTVNAVWGNAASVLVGDFLISRALQLMVALR-----HPRL 115 Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS- 203 + S + N +G + Q+++++D E + KT + A E+GA++ Sbjct: 116 LDIFSQSTNTISEGEVL-QLINVRDPNTSEDNYMRVIHHKTAKMFESAAETGAVLGANDV 174 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 + + +G +LGI FQL DD+LD + D L K Sbjct: 175 SDHVDAFATYGRHLGIAFQLIDDVLDYQGDASELGK 210 >gi|288869706|ref|ZP_05975848.2| short chain isoprenyl diphosphate synthase [Methanobrevibacter smithii DSM 2374] gi|288861214|gb|EFC93512.1| short chain isoprenyl diphosphate synthase [Methanobrevibacter smithii DSM 2374] Length = 335 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 7/204 (3%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 + L A Y GGK +R L + + +L+ AAIE IH +SLIH Sbjct: 32 PNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIH--DDI 89 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MD+ +RRGKP VH +DE AI+AG+ L + AFEII + + + L+ T Sbjct: 90 MDDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNTPAQLSQTLA-TVAD 148 Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 + GQ D+ E + E + + KTGAL+ A ++GAIM A+Q + + Sbjct: 149 ACVKICEGQASDMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMY 208 Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235 +G +G+ FQ+ DD LD D Sbjct: 209 DYGRLIGLAFQIQDDYLDLASDEE 232 >gi|148284169|ref|YP_001248259.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Boryong] gi|146739608|emb|CAM79381.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Boryong] Length = 338 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 8/227 (3%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65 S + + S +D + ++ + + + + Y GGK+IR L + LF Sbjct: 11 SFIDKLSNFLDKDMSEVNNVILNCISSSQEQLIYEVGTYFFNAGGKRIRPMLTIIISKLF 70 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 N + L+ + AA+E IH +L+HDD+ +D +RR PTVH+++D T+I+ G+ L + Sbjct: 71 NYHGLSHYYLAAAVELIHSATLLHDDV--VDESKMRRSHPTVHLKWDTKTSILIGDFLFS 128 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 +F+++ ++IR+ SL+ N + G + + I E + F + + KT Sbjct: 129 QSFKLMIK-----SNSIRALKSFSLSFNTIITGEVKQLTQLHNQKIITEDEYFRVIQAKT 183 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L +CE AI+++ S ++ FG LG+IFQ+ DD+LD Sbjct: 184 AELFGTSCEIAAIISNQSAPTCLLVKTFGIKLGLIFQIVDDILDYFG 230 >gi|315149503|gb|EFT93519.1| geranyltranstransferase [Enterococcus faecalis TX0012] Length = 293 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|319944647|ref|ZP_08018914.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599] gi|319742086|gb|EFV94506.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599] Length = 329 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 22/234 (9%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + E+ +D ++ + L + ++T A GGK++R L+T A Sbjct: 10 ISEDLAEVDRVIKERLDSPVALIRTI-------ATYIISAGGKRLRPVLLTLFARALGYG 62 Query: 69 HLTALRV-------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 R A +E IH +L+HDD+ +D +RRG PT + Q+ +++ G+ Sbjct: 63 QTEQQRAQGHHWLMAAVVEFIHTATLLHDDI--VDESTLRRGAPTANAQFGNAASVLVGD 120 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L + +F+++ + + L+ N+ +G + Q+L+ D +DE + Sbjct: 121 FLYSRSFQMMVE-----VEQLHILKTLADATNVIAEGEVL-QLLNCNDPDVDEAAYLQVI 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KT L + GA++A A+ ++ +G +LG FQ+ DD+LD + Sbjct: 175 RFKTAKLFEASARIGAVLAGATPELEDAAAAYGRHLGTAFQIIDDVLDYSGESE 228 >gi|167645671|ref|YP_001683334.1| polyprenyl synthetase [Caulobacter sp. K31] gi|167348101|gb|ABZ70836.1| Polyprenyl synthetase [Caulobacter sp. K31] Length = 303 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 78/233 (33%), Positives = 119/233 (51%), Gaps = 9/233 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61 +++ +D L DL S DRL+ A+RY L GK+ R + Sbjct: 11 AAFLQRVEALRAGVDRRLADLAPAVGSA-----PDRLVEAVRYCLLAPGKRFRPMVTLLA 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+ +AL A E IH SLI DDLP+MD+ +RRG PT+H +DE TAI+AG Sbjct: 66 AAECGAPEGSALDAACAFEMIHAASLILDDLPAMDDAGLRRGLPTIHRAFDEATAILAGV 125 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179 GLL A+ +I+ L ++R++L H +G G++ GQ D +D+ D + Sbjct: 126 GLLNQAYAVIA-ADQGLPGSLRAELTARAAHAVGFSGLIAGQARDLFDRDQIRDPAALER 184 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTG L+ A + GA++A A + E F ++G+ FQ+ DDL+D + Sbjct: 185 LNHEKTGVLIIAAAQGGALVAGAPEATVEAFGTFARHIGLAFQIRDDLIDAQG 237 >gi|254435950|ref|ZP_05049457.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] gi|207089061|gb|EDZ66333.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27] Length = 322 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 19/226 (8%) Query: 22 DLLLQTASHMQTQHNDRLLSAI-------RYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 DL+ + RL S + Y + GGK++R +V A F + Sbjct: 8 DLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQGSYHI 67 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + A IE IH +L+HDD+ +D+ +RRG+ T + + +++ G+ L + AFE++ Sbjct: 68 DIAAIIEFIHTATLLHDDV--VDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVG 125 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 D++R +L+ T N +G + Q+L+ + E I + KT L A Sbjct: 126 -----VDSMRVMEILARTTNTIAEGEVM-QLLNCHEPDTTEECYLEIIRSKTAKLFEAAT 179 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + GA++ H E++ + +G +LG FQL DD+LD EDL K Sbjct: 180 QLGAVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGK 225 >gi|256962594|ref|ZP_05566765.1| polyprenyl synthetase [Enterococcus faecalis HIP11704] gi|257086340|ref|ZP_05580701.1| polyprenyl synthetase [Enterococcus faecalis D6] gi|307271992|ref|ZP_07553259.1| geranyltranstransferase [Enterococcus faecalis TX0855] gi|256953090|gb|EEU69722.1| polyprenyl synthetase [Enterococcus faecalis HIP11704] gi|256994370|gb|EEU81672.1| polyprenyl synthetase [Enterococcus faecalis D6] gi|306511339|gb|EFM80342.1| geranyltranstransferase [Enterococcus faecalis TX0855] gi|315026958|gb|EFT38890.1| geranyltranstransferase [Enterococcus faecalis TX2137] Length = 293 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 88/235 (37%), Positives = 135/235 (57%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + M L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLL--MQKLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|70732635|ref|YP_262398.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5] gi|68346934|gb|AAY94540.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5] Length = 322 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS I +G + Q+ + Sbjct: 100 NAMWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMRILSQATRIIAEGEVL-QLSKV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A +A A++ + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALAGATEEQAEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|315574274|gb|EFU86465.1| geranyltranstransferase [Enterococcus faecalis TX0309B] gi|315581571|gb|EFU93762.1| geranyltranstransferase [Enterococcus faecalis TX0309A] Length = 293 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|313497049|gb|ADR58415.1| IspB [Pseudomonas putida BIRD-1] Length = 322 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 8/186 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS + +G + Q+ + Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A +A A+ ++E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEED 233 LD + D Sbjct: 214 LDYKGD 219 >gi|297537721|ref|YP_003673490.1| trans-hexaprenyltranstransferase [Methylotenera sp. 301] gi|297257068|gb|ADI28913.1| Trans-hexaprenyltranstransferase [Methylotenera sp. 301] Length = 332 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 9/193 (4%) Query: 41 SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99 Y + GGK++R LV LF ++ A +E IH +L+HDD+ +D Sbjct: 44 QVAHYIVNSGGKRLRPILVLLSGGLFGEVKPEHHQLAAVVEFIHTATLLHDDV--VDESS 101 Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159 RRG+ T + + +++ G+ + + AF+++ + + N+R +LS N+ +G Sbjct: 102 KRRGQNTANAIFGNAASVLVGDFVYSRAFQMMVAVQ-----NMRVMEVLSNATNVIAEGE 156 Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219 + Q+L+I + + + + KT L A GAI+++AS +++E L +G ++G Sbjct: 157 VL-QLLNIHNADVTDGAYLQVIHYKTAKLFEAATRLGAIISNASPSDEEALSQYGMHIGT 215 Query: 220 IFQLADDLLDCEE 232 FQL DD+LD Sbjct: 216 AFQLIDDVLDLSG 228 >gi|296116237|ref|ZP_06834855.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295977343|gb|EFG84103.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 295 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 94/238 (39%), Positives = 146/238 (61%), Gaps = 11/238 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 L + L ++ ++ +D LL RL+ A+RYA L GGK++R +LV E AS Sbjct: 4 LRASLAARAEAVEHTIDRLLAPVNG-----GEARLIDAMRYATLGGGKRLRGYLVAEVAS 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +F V A R A++E +H YSL+HDDLP+MD+ +RRG+P+ H ++DE TAI+AG+ L Sbjct: 59 MFKVEEAGAYRAAASVEMLHAYSLVHDDLPAMDDDDLRRGQPSTHRKFDEATAILAGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 T AF I++ P T +R L+ +L G GM+GGQM+D++ E + +V + Sbjct: 119 QTMAFGILADPATHRDAGVRIDLVTTLAAASGAAGMVGGQMIDMEGEGRSLSLEEVARLH 178 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 +KTG L+ ++ E+GAI+ A+ + +ER+ +G +LG FQ+ADD+LD E+L K Sbjct: 179 ALKTGCLIRYSAEAGAILGQAAPDLRERIAAYGRDLGAAFQVADDVLDATASAEELGK 236 >gi|94497294|ref|ZP_01303865.1| Polyprenyl synthetase [Sphingomonas sp. SKA58] gi|94423157|gb|EAT08187.1| Polyprenyl synthetase [Sphingomonas sp. SKA58] Length = 302 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 144/235 (61%), Gaps = 8/235 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62 + ++ ++ + ID D LL + RL A+R+A + GGK++R LV Sbjct: 10 DMLARARDVAAHIDMGFDRLLA-----VPDDARARLYDAMRHAAIGGGKRLRPLLVQAAC 64 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF+++ +ALRVG AIECIH YSLIHDDLP+MD+ +RRGKPTVH +DE TAI+AG+ Sbjct: 65 DLFHISRESALRVGLAIECIHVYSLIHDDLPAMDDDDMRRGKPTVHKAFDEATAILAGDC 124 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180 L AFE+++ +T +R +L+ +L G GM GGQM+D++ E D V + Sbjct: 125 LHDLAFEVLADAETHPDPFVRIELVKALATCSGPAGMAGGQMMDLEAERTRFDLATVTRL 184 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q +KTGAL+CF E+ AIMA Q + L + ++G+ FQ+ADDLLD E D+ Sbjct: 185 QNLKTGALICFCVEAAAIMARLPQEARTGLHGYARDIGLAFQIADDLLDVEGDVA 239 >gi|238752774|ref|ZP_04614243.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380] gi|238709032|gb|EEQ01281.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380] Length = 306 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 13/245 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59 + +L + +R++ + D + N L+ A+RY A+LGGK++R +LV Sbjct: 6 LTVDFNQQLAAHQQRVNQAILDFIAPL-----PFGNSDLVKAMRYGAVLGGKRLRPYLVY 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +F ++ AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+A Sbjct: 61 ATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILA 120 Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G+ L T AF I+S + D R ++ L H G+ GM GGQ LD++ E I T Sbjct: 121 GDALQTLAFSILSEAAMPDVADKDRLSMIAELAHASGVAGMCGGQALDLEAEARQISLTD 180 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDCEED-- 233 + I + KTGAL+ A GA+ A A+ E L + +G+ FQ+ DD+LD D Sbjct: 181 LEQIHRHKTGALIRAAVRLGALAAGAAGREALPLLDRYANAIGLAFQVQDDILDVIGDTA 240 Query: 234 -LPKK 237 + K+ Sbjct: 241 TIGKR 245 >gi|227517904|ref|ZP_03947953.1| geranyltranstransferase [Enterococcus faecalis TX0104] gi|229548922|ref|ZP_04437647.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200] gi|255971435|ref|ZP_05422021.1| polyprenyl synthetase [Enterococcus faecalis T1] gi|255974048|ref|ZP_05424634.1| polyprenyl synthetase [Enterococcus faecalis T2] gi|256617904|ref|ZP_05474750.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200] gi|256761737|ref|ZP_05502317.1| polyprenyl synthetase [Enterococcus faecalis T3] gi|256960163|ref|ZP_05564334.1| polyprenyl synthetase [Enterococcus faecalis Merz96] gi|257089390|ref|ZP_05583751.1| polyprenyl synthetase [Enterococcus faecalis CH188] gi|257415599|ref|ZP_05592593.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG] gi|257421230|ref|ZP_05598220.1| geranyltranstransferase [Enterococcus faecalis X98] gi|293382531|ref|ZP_06628465.1| geranyltranstransferase [Enterococcus faecalis R712] gi|293387869|ref|ZP_06632408.1| geranyltranstransferase [Enterococcus faecalis S613] gi|307275463|ref|ZP_07556605.1| geranyltranstransferase [Enterococcus faecalis TX2134] gi|307278969|ref|ZP_07560028.1| geranyltranstransferase [Enterococcus faecalis TX0860] gi|312900452|ref|ZP_07759759.1| geranyltranstransferase [Enterococcus faecalis TX0470] gi|312904544|ref|ZP_07763702.1| geranyltranstransferase [Enterococcus faecalis TX0635] gi|312906866|ref|ZP_07765863.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512] gi|312952746|ref|ZP_07771608.1| geranyltranstransferase [Enterococcus faecalis TX0102] gi|312978879|ref|ZP_07790605.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516] gi|227074658|gb|EEI12621.1| geranyltranstransferase [Enterococcus faecalis TX0104] gi|229305943|gb|EEN71939.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200] gi|255962453|gb|EET94929.1| polyprenyl synthetase [Enterococcus faecalis T1] gi|255966920|gb|EET97542.1| polyprenyl synthetase [Enterococcus faecalis T2] gi|256597431|gb|EEU16607.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200] gi|256682988|gb|EEU22683.1| polyprenyl synthetase [Enterococcus faecalis T3] gi|256950659|gb|EEU67291.1| polyprenyl synthetase [Enterococcus faecalis Merz96] gi|256998202|gb|EEU84722.1| polyprenyl synthetase [Enterococcus faecalis CH188] gi|257157427|gb|EEU87387.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG] gi|257163054|gb|EEU93014.1| geranyltranstransferase [Enterococcus faecalis X98] gi|291080079|gb|EFE17443.1| geranyltranstransferase [Enterococcus faecalis R712] gi|291082716|gb|EFE19679.1| geranyltranstransferase [Enterococcus faecalis S613] gi|295113841|emb|CBL32478.1| farnesyl-diphosphate synthase [Enterococcus sp. 7L76] gi|306504356|gb|EFM73567.1| geranyltranstransferase [Enterococcus faecalis TX0860] gi|306507851|gb|EFM76979.1| geranyltranstransferase [Enterococcus faecalis TX2134] gi|310627120|gb|EFQ10403.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512] gi|310629262|gb|EFQ12545.1| geranyltranstransferase [Enterococcus faecalis TX0102] gi|310632057|gb|EFQ15340.1| geranyltranstransferase [Enterococcus faecalis TX0635] gi|311288316|gb|EFQ66872.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516] gi|311292428|gb|EFQ70984.1| geranyltranstransferase [Enterococcus faecalis TX0470] gi|315153058|gb|EFT97074.1| geranyltranstransferase [Enterococcus faecalis TX0031] gi|315156830|gb|EFU00847.1| geranyltranstransferase [Enterococcus faecalis TX0043] gi|315157617|gb|EFU01634.1| geranyltranstransferase [Enterococcus faecalis TX0312] gi|315171919|gb|EFU15936.1| geranyltranstransferase [Enterococcus faecalis TX1342] gi|315577402|gb|EFU89593.1| geranyltranstransferase [Enterococcus faecalis TX0630] Length = 293 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|167573592|ref|ZP_02366466.1| geranyltranstransferase [Burkholderia oklahomensis C6786] Length = 294 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 75/235 (31%), Positives = 117/235 (49%), Gaps = 10/235 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 ++ +R++T L L +T +L A+RYA L GGK++R L Sbjct: 3 FDQWMRSVLERVETALGHYLP-----AETVAPAQLHEAMRYAALGGGKRVRPLLCHAAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L Sbjct: 58 LTGASEAALNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVEYDEATALLVGDAL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 + AF ++ D + + L G GM GGQ +D+ + + + Sbjct: 118 QSQAFVALTDAAALPLDRQPAL-VRELALASGSIGMAGGQAIDLASVGHALSRDALETMH 176 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ + GA+ S++ L + +G+ FQ+ DD+LD D Sbjct: 177 RMKTGALLRASVRMGALAGETPSEDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231 >gi|15602211|ref|NP_245283.1| IspB [Pasteurella multocida subsp. multocida str. Pm70] gi|12720590|gb|AAK02430.1| IspB [Pasteurella multocida subsp. multocida str. Pm70] Length = 330 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + IE IH +L+HDD+ +D +RRG PT + Sbjct: 50 GGKRIRPMIAILAARALGFHGEQPITCATFIEFIHTATLLHDDV--VDESALRRGNPTAN 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ D++R ++S N+ +G + Q++++ Sbjct: 108 AEFGNAASVLVGDFIYTRAFQLMTQL-----DSLRILKVMSDATNVIAEGEV-QQLMNVN 161 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A AI+AHA++ ++ LR +G LG FQL DD+L Sbjct: 162 DPNTTEENYMQVIYGKTARLFEAATHCAAILAHATEAQENALREYGCYLGTAFQLVDDIL 221 Query: 229 DCEED 233 D D Sbjct: 222 DYSAD 226 >gi|193214123|ref|YP_001995322.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110] gi|193087600|gb|ACF12875.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110] Length = 335 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 19/230 (8%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH 69 E RI+ L LL + L Y L G GK++R LV A Sbjct: 19 EFHTRINEELQQCLL-------GKEPKSLYEPATYILTGKGKRVRPVLVLLGAESICGTS 71 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 AL + ++E +H ++LIHDD+ MDN +R G+ TVH++++E AI++G+ +L +A+E Sbjct: 72 DHALNLALSVEVLHNFTLIHDDI--MDNAALRHGRETVHLKWNENAAILSGDMMLAFAYE 129 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTG 186 + + R +L + + + GQ D+ E + ++ + KTG Sbjct: 130 LALKTNSS-----RLTKILDVITQSTIV-ICEGQTYDMDFEKRTDVTMSEYLDMISKKTG 183 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ + E G + A A+ + L +GE +G FQ+ DDLLD D K Sbjct: 184 RLIAASLELGGLAAEATDEQLAILTEYGELIGQAFQVQDDLLDIMADDKK 233 >gi|29653729|ref|NP_819421.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493] gi|161831382|ref|YP_001596323.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331] gi|29540992|gb|AAO89935.1| farnesyl pyrophosphate synthetase [Coxiella burnetii RSA 493] gi|161763249|gb|ABX78891.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331] Length = 332 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 117/234 (50%), Gaps = 20/234 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60 L +Q + + +D ++ + + +SH+ L+ I + ++ GGK++R +V Sbjct: 13 ESLRQPVQNDIEAVDALI---VKELSSHVP------LIETITHHIIQSGGKRLRPLVVLL 63 Query: 61 CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + IE IH +L+HDD+ +D RRG+ T + + +++ Sbjct: 64 TARACGYEQDVEHQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLV 121 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + AF+I++ + N+ +L+ T N +G + Q+++ D IDE + Sbjct: 122 GDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QLMNQNDPDIDEVTYYE 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KT L A E GAI+A ++ ++ + FG +LG+ +Q+ DDLLD +D Sbjct: 176 VIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGFHLGMAYQIIDDLLDYSKD 229 >gi|296272236|ref|YP_003654867.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299] gi|296096411|gb|ADG92361.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299] Length = 286 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 67/185 (36%), Positives = 111/185 (60%), Gaps = 5/185 (2%) Query: 48 LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK+ R L+ + N +AL V +E +H YSL+HDDLP+MD+ +RRG T Sbjct: 36 AGGKRFRPMLLLSVVNSKNSLLIKSALPVALGLEMLHTYSLVHDDLPAMDDATLRRGFET 95 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H +YDEVTAI+ G+ L T AF I++ L +++ + + L+ + G+ GM+ GQ +D Sbjct: 96 LHKKYDEVTAILVGDALNTEAFNKIANA--PLSSDVKIECIKVLSSDGGIDGMIIGQAID 153 Query: 167 IQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 E ++ +Q+ + KT L+ + + GAI+A+ +E+L FG ++G++FQ+ Sbjct: 154 CFFENQKLELSQLEFLHIHKTAKLIAGSLKMGAIIANYDLAIQEKLYNFGIDIGLLFQIQ 213 Query: 225 DDLLD 229 DD+LD Sbjct: 214 DDILD 218 >gi|124265703|ref|YP_001019707.1| dimethylallyltransferase [Methylibium petroleiphilum PM1] gi|124258478|gb|ABM93472.1| Dimethylallyltransferase [Methylibium petroleiphilum PM1] Length = 330 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV A + A +E IH +L+HDD+ +D +RRG+ T Sbjct: 50 AGGKRLRPMLVLLFAQALGFRGPERFELAATVEFIHTATLLHDDV--VDESALRRGRDTA 107 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ +++ G+ L + AF+++ S + +R +L+ N+ +G + Q++++ Sbjct: 108 NARFGNAASVLVGDFLYSRAFQMMVS-----VNRMRVLEVLADATNVIAEGEVL-QLMNM 161 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D + + + KT L + GA++A AS + +G LG FQL DDL Sbjct: 162 HDPDLSIDDYLRVIRFKTAKLFEASARLGAMLADASPGVETACADYGRALGTAFQLVDDL 221 Query: 228 LDCEE 232 LD E Sbjct: 222 LDYEG 226 >gi|260576245|ref|ZP_05844237.1| Polyprenyl synthetase [Rhodobacter sp. SW2] gi|259021513|gb|EEW24817.1| Polyprenyl synthetase [Rhodobacter sp. SW2] Length = 333 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 14/230 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L + L + ++ ++ + + + Q L+ A GGK++R L A Sbjct: 12 DRLAAFLAADMLAVNVLIRERMASEHAPRIPQVTAHLVEA------GGKRLRPLLTLAAA 65 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 66 RLCGYGGPFHVHLAATVEFIHTATLLHDDV--VDESSRRRGRPTANLLWDNKSSVLVGDY 123 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L +F+++ P N+R +L+ +G + Q+ QD E + + Sbjct: 124 LFARSFQLMVEPG-----NLRVLDILANASASIAEGEVL-QLTAAQDLATTEAIYLQVVR 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT AL A E G ++A A ++ + L +G+ LG+ FQ+ DDLLD Sbjct: 178 GKTAALFSAATEVGGVIAGAPADQVKALFTYGDALGVAFQIVDDLLDYGG 227 >gi|308183081|ref|YP_003927208.1| geranyltranstransferase [Helicobacter pylori PeCan4] gi|308065266|gb|ADO07158.1| geranyltranstransferase [Helicobacter pylori PeCan4] Length = 303 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 127/244 (52%), Gaps = 15/244 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 MN S +R ++ L+ L H+++ H + L GGK+ R L Sbjct: 1 MNNPNLSFYHNECERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLA 56 Query: 61 C-ASLFN-----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114 +L ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE Sbjct: 57 VLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDET 116 Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172 TA++ G+ L TY+FE++S+ + L+ +I +L+ L+ N G++GM+ GQ LD E + Sbjct: 117 TAVLIGDALNTYSFELLSN--SLLESHIIVELVKILSANGGIKGMVLGQALDCYFENTPL 174 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + Q+ + + KT L+ + G + + + + L+ FG +G+ FQ+ DD++D Sbjct: 175 NLEQLTFLHEHKTAKLISASLMMGLVASGIKDEGLFKWLQDFGLKMGLCFQVLDDIIDVT 234 Query: 232 EDLP 235 +D Sbjct: 235 QDEE 238 >gi|284006654|emb|CBA71916.1| octaprenyl-diphosphate synthase [Arsenophonus nasoniae] Length = 323 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGKKIR + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKKIRPMIAILVGRALGYEGKKHINVAALIEFIHTATLLHDDV--VDESTLRRGKKTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ D++ ++S N+ +G + Q+++ Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTEL-----DSMPILKLMSDATNVIAEGEVS-QLINCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E+ I KT L A + AI++ A++ +++ LR +G LG FQL DDLL Sbjct: 155 NPDITESTYMQIIYSKTARLFEAATHASAIVSGANETQQQALRDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|238793005|ref|ZP_04636634.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909] gi|238727605|gb|EEQ19130.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909] Length = 323 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALHYEGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLES-----LRVLTLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S A++A A++ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLADATETQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSSD 219 >gi|323493611|ref|ZP_08098732.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546] gi|323312134|gb|EGA65277.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546] Length = 323 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPLLAVLSARALGYQGEAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----LKILKLMSDAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A + L+ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFEAATQIGAILNEAPAEVELALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|171059952|ref|YP_001792301.1| polyprenyl synthetase [Leptothrix cholodnii SP-6] gi|170777397|gb|ACB35536.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6] Length = 313 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 17/225 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 + ++D ++ L + + Y + GGK+IR LV A + Sbjct: 1 MAAEMAQVDAVIHRRLASEVALINQIS--------HYIVSAGGKRIRPLLVLLFARALDF 52 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + A Sbjct: 53 DGPERFEMAATVEFIHTATLLHDDV--VDESDLRRGRKTANAIFGNAASVLVGDFLYSRA 110 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F+++ S + +R +L+ N+ +G + Q+L++ D I + + KT Sbjct: 111 FQMMVS-----VNRLRVLDVLADATNVIAEGEVL-QLLNMHDPDISIEAYLRVIRYKTAK 164 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L + +GA++A S ++ +G LG FQL DDLLD E Sbjct: 165 LFEASARTGAVLAGVSAPLEDSCASYGRCLGTAFQLIDDLLDYEG 209 >gi|317455530|pdb|3Q1O|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter Pylori Complexed With Magnesium And Isoprenyl Diphosphate gi|317455531|pdb|3Q1O|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter Pylori Complexed With Magnesium And Isoprenyl Diphosphate gi|317455532|pdb|3Q1O|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter Pylori Complexed With Magnesium And Isoprenyl Diphosphate gi|317455533|pdb|3Q1O|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter Pylori Complexed With Magnesium And Isoprenyl Diphosphate Length = 310 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71 + L H+++ H + L GGK+ R L +L Sbjct: 23 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 82 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 83 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 142 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 143 SNA--LLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 200 Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + E + L+ FG +G+ FQ+ DD++D +D Sbjct: 201 SASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 247 >gi|315173304|gb|EFU17321.1| geranyltranstransferase [Enterococcus faecalis TX1346] Length = 293 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|291612793|ref|YP_003522950.1| trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1] gi|291582905|gb|ADE10563.1| Trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1] Length = 320 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 16/225 (7%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAI-------RYAL-LGGKKIRSFLVTECASLFNVNHLT 71 L LL + + RL S + Y + GGK++R LV A F Sbjct: 4 LKRLLASDMAAVDAVIRARLHSEVALVNQVGEYIINSGGKRLRPALVLLSAQAFGYGGKH 63 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F+++ Sbjct: 64 HHDLAAVVEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDFLYSRSFQMM 121 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 +R L+ N+ +G + Q+L+ D +D + KT L Sbjct: 122 VDVG-----EMRVMQTLADATNVIAEGEVL-QLLNCHDASVDIPNYMRVIHCKTAKLFEA 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A GAI+ AS ++E +G +LG FQL DD+LD D + Sbjct: 176 AMRLGAILGKASTADEEAAAKYGMHLGTAFQLIDDVLDYSADEAQ 220 >gi|222871917|gb|EEF09048.1| predicted protein [Populus trichocarpa] Length = 254 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 7/212 (3%) Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 + L A+RYA+L GGK++R LV A + A+R G A+E IH YSL+H Sbjct: 6 VGVDAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVDGLQPAAVRAGCAVELIHAYSLVH 65 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQL 146 DD+P MDN +RRGKPTVH+Q+ E +A++AG+ L AFE++ + D ++++L Sbjct: 66 DDMPCMDNDVLRRGKPTVHVQFGEASALLAGDALQALAFELLVPEPDQTGSMPDALQARL 125 Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIM-AHAS 203 L G QGM GGQ +D+ + E Q+ + ++KTGAL+ + GA Sbjct: 126 CRLLGRAAGAQGMAGGQAIDLASVGLQLSEAQLREMHRLKTGALLHASVLMGAACKEGVD 185 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + L +G+ LG+ FQ+ DD+LD D Sbjct: 186 AQAWQALSDYGQALGVAFQVVDDILDVVADSA 217 >gi|209693963|ref|YP_002261891.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238] gi|208007914|emb|CAQ78045.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238] Length = 323 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T +F++++S + I+ ++S + N+ +G + Q+++ Sbjct: 101 AEFGNAASVLVGDFIYTRSFQMMTSLGS-----IKILSLMSESVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ +ASQ + L+ +G+ LG FQL DD++ Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILNNASQEIETALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|222109984|ref|YP_002552248.1| polyprenyl synthetase [Acidovorax ebreus TPSY] gi|221729428|gb|ACM32248.1| Polyprenyl synthetase [Acidovorax ebreus TPSY] Length = 327 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 104/232 (44%), Gaps = 17/232 (7%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 + + ++ + +D ++ L + RY + GGK++R L+ Sbjct: 8 TAATLALIADDMQEVDKVIASRLQSAV--------PLVGEVARYIISAGGKRLRPALLLL 59 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + + A +E IH +L+HDD+ +D +RRG+PT + + +++ G Sbjct: 60 MSGALGYTGSQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANENFGNPASVLVG 117 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + L T AF+++ + +R +L+ N+ +G + Q+++ D + E+ + Sbjct: 118 DFLYTRAFQMMVETSS-----LRVMEILAEATNVIAEGEV-QQLMNTHDASLSESGYLNV 171 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KT L + A++A + + +G+ LG FQ+ DD+LD + Sbjct: 172 IRSKTAKLFEASARLAAVLAASPPEIEHACASYGQALGTAFQVIDDVLDYDG 223 >gi|323700415|ref|ZP_08112327.1| Polyprenyl synthetase [Desulfovibrio sp. ND132] gi|323460347|gb|EGB16212.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132] Length = 297 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 81/225 (36%), Positives = 125/225 (55%), Gaps = 12/225 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + ++ L L RLL+++ Y+LL GGK++R LV Sbjct: 3 FKEDLGRRAALVEAYLVGCLRDRNI------PARLLASMEYSLLAGGKRLRPVLVLAWNG 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + A+ A++ECIH YSLIHDDLP+MD+ +RRG+P+ H Q+DE TAI+AG+GL Sbjct: 57 LLGGDADKAMPFAASMECIHTYSLIHDDLPAMDDDDLRRGRPSNHKQFDEATAILAGDGL 116 Query: 124 LTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVF 178 LT AF +++ L + + L G GM+GGQ +D++ + ++ Sbjct: 117 LTEAFVLMTETCLVKGLPAERVLRAIAVLARAAGSGGMVGGQAVDMELTGRTGVPLDELK 176 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223 + MKTGAL+ ACE GAI+A A++++ + R FG +G+ FQ+ Sbjct: 177 KMHAMKTGALLTAACECGAILAGAAESDVDNARRFGRKIGVAFQI 221 >gi|121998628|ref|YP_001003415.1| trans-hexaprenyltranstransferase [Halorhodospira halophila SL1] gi|121590033|gb|ABM62613.1| Trans-hexaprenyltranstransferase [Halorhodospira halophila SL1] Length = 323 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 16/234 (6%) Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59 MN + ++ ++ ++++ L + + S GGK++R +V Sbjct: 1 MNLDAIRELAADDMAEVNRLIEERLSSDVVLINQLAYHIVHS-------GGKRLRPMVVL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A +++ A IE IH +L+HDD+ +D +RRGK T H + +++ Sbjct: 54 LAARACGYQGKDHVQLAAIIEFIHTATLLHDDV--VDGSDMRRGKQTAHTIWGNEASVLV 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L T AFE++ D++ +L+ N +G + Q++++ + + E Sbjct: 112 GDFLYTRAFEMMVEL-----DSMAVLRILARATNTIARGEVM-QLMNVHEPDLTEADYRQ 165 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT L C++GA++A E L +G +LG +QL DD LD D Sbjct: 166 VIYRKTATLFEAGCQNGAVLAGLDDAGCEALAAYGRHLGTAYQLVDDALDYSGD 219 >gi|88704338|ref|ZP_01102052.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71] gi|88701389|gb|EAQ98494.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71] Length = 320 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 10/226 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 +QE + LD + +++ + + + +Y + GGK++R LV ++ Sbjct: 1 MQEVRAVVSKELDAVNAVIIEQLRSDV-EMVENVGQYIVDAGGKRLRPVLVLLSSAALGS 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +R A +E IH +L+HDD+ +D +RRG+PT + + ++++ G+ L T A Sbjct: 60 ISELQIRFAAVVEFIHTATLLHDDV--VDVSELRRGRPTANSAFGNASSVLVGDFLYTRA 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F+++ + M++ T N G + Q++ D E Q + + KT A Sbjct: 118 FQLMVTLGNHD-----VLKMMADTTNTIAAGEVL-QLIRAGDSSTSEDQYYDVIDRKTAA 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L C+ A++A A L +G N+GI FQ+ DDLLD + D Sbjct: 172 LFAAGCQGAALLAGADSGNVRDLNIYGRNVGIAFQIVDDLLDYQGD 217 >gi|193070326|ref|ZP_03051269.1| octaprenyl-diphosphate synthase [Escherichia coli E110019] gi|192956385|gb|EDV86845.1| octaprenyl-diphosphate synthase [Escherichia coli E110019] Length = 323 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+ + E++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILVGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 >gi|146278504|ref|YP_001168663.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145556745|gb|ABP71358.1| Polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 333 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 14/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + L + ++ ++ + + + + L+ A GGK++R L A L Sbjct: 14 LAAWLAGDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 67 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + A +E IH +L+HDD+ +D + RRGKPT ++ +D ++++ G+ L Sbjct: 68 CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 125 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 +F+++ + +R +L+ +G + Q+ QD E + + K Sbjct: 126 ARSFQLMVETGS-----LRVMDILANASATISEGEVL-QLTAAQDLRTTEDIYLQVVRGK 179 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T AL A E G ++A + + L +G+ LGI FQ+ DDLLD Sbjct: 180 TAALFAAATEVGGVVAGVPEAQVAALHAYGDALGIAFQIVDDLLDYGG 227 >gi|270265042|ref|ZP_06193305.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13] gi|270040976|gb|EFA14077.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13] Length = 310 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 30 GGKRIRPMIAVLAARALHYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q++++ Sbjct: 88 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNVN 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI++ AS+ E++ L+ +G LG FQL DDLL Sbjct: 142 DPDITEESYMRVIYSKTARLFEAAAQSSAILSEASEAEEKALQDYGRYLGTAFQLIDDLL 201 Query: 229 DCEED 233 D D Sbjct: 202 DYSAD 206 >gi|159045835|ref|YP_001534629.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12] gi|157913595|gb|ABV95028.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12] Length = 291 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 92/238 (38%), Positives = 133/238 (55%), Gaps = 14/238 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 G + + + RI LDDL+ Q + + YA GGK++R LV E A Sbjct: 2 SGFAAAQADGATRIAACLDDLI-------GAQPESVIRDGMAYATRGGKRLRGVLVLETA 54 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L V A+ AAIEC+H YSL+HDDLP+MD+ +RRG+PTVH+++DE +AI+ G+ Sbjct: 55 WLHGVAPERAVYAAAAIECLHAYSLVHDDLPAMDDDDLRRGQPTVHVKWDEASAILVGDA 114 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178 L T AFE +S P+ + L+ SL G GM+ GQ LDI E + ++ Sbjct: 115 LQTLAFEALSDPRMTDDPAVALALVRSLAQASGAAGMVLGQALDIAAETAAAPLSLDEIT 174 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +Q KTGAL+ ++ E+GA++A A LR + E +G+ FQ+ADD+LD D K Sbjct: 175 RLQAGKTGALIRWSAEAGALLARADP---APLRRYAEAIGLAFQIADDILDVTGDAEK 229 >gi|212213122|ref|YP_002304058.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212] gi|212011532|gb|ACJ18913.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212] Length = 332 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 117/234 (50%), Gaps = 20/234 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60 L +Q + + +D ++ + + +SH+ L+ I + ++ GGK++R +V Sbjct: 13 ESLRQLVQNDIEAVDALI---VKELSSHVP------LIETITHHIIQSGGKRLRPLVVLL 63 Query: 61 CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + IE IH +L+HDD+ +D RRG+ T + + +++ Sbjct: 64 TARACGYEQDVEHQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLV 121 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + AF+I++ + N+ +L+ T N +G + Q+++ D IDE + Sbjct: 122 GDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QLMNQNDPDIDEVTYYE 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KT L A E GAI+A ++ ++ + FG +LG+ +Q+ DDLLD +D Sbjct: 176 VIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKD 229 >gi|154706037|ref|YP_001425022.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway 5J108-111] gi|154355323|gb|ABS76785.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway 5J108-111] Length = 332 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 116/234 (49%), Gaps = 20/234 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60 L +Q + +D ++ + + +SH+ L+ I + ++ GGK++R +V Sbjct: 13 ESLRQPVQNDIAAVDALI---VKELSSHVP------LIETITHHIIQSGGKRLRPLVVLL 63 Query: 61 CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + IE IH +L+HDD+ +D RRG+ T + + +++ Sbjct: 64 TARACGYEQDVEHQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLV 121 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + AF+I++ + N+ +L+ T N +G + Q+++ D IDE + Sbjct: 122 GDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QLMNQNDPDIDEVTYYE 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + + KT L A E GAI+A ++ ++ + FG +LG+ +Q+ DDLLD +D Sbjct: 176 VIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKD 229 >gi|320108147|ref|YP_004183737.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4] gi|319926668|gb|ADV83743.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4] Length = 309 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 84/244 (34%), Positives = 127/244 (52%), Gaps = 21/244 (8%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L+ + D L+ LL + + ++RY++ GGK++R L E + Sbjct: 12 LKSGAAATDAALERLLPGSEIA-----PHSIHRSMRYSVFAGGKRLRPILCMEAGRMVAG 66 Query: 68 NHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + +G+A+E +H YSLIHDDLPS D+ +RRGKPT HI + E AI+ G+ L T+ Sbjct: 67 KLPAGIADLGSALEMLHTYSLIHDDLPSFDDDDLRRGKPTSHIVFGEAIAILTGDALQTF 126 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGL---------QGMLGGQMLDIQDEFI--DET 175 A+E +S + ++ +++ G+ GM+GGQ+LDI+ E Sbjct: 127 AYETLSRLSCPAEATVQIIREIAIATGTGVGPTDGTGLPYGMIGGQVLDIEGEGTKPTAE 186 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232 QV I + KTGAL+ + +G I A AS E LR FG+ G+ FQ+ DD+LD E Sbjct: 187 QVDRIHRAKTGALITTSIVTGGIFAGASAETVEHLRLFGQRAGLAFQIVDDVLDMTQSSE 246 Query: 233 DLPK 236 DL K Sbjct: 247 DLGK 250 >gi|91776484|ref|YP_546240.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT] gi|91710471|gb|ABE50399.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT] Length = 296 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 9/236 (3%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62 S + +R++ LD+LL + RL A+RYA+LGG K++R+ L Sbjct: 3 DFQSWARHTQQRMEHTLDNLLPASYIA-----PTRLHEAMRYAVLGGGKRVRALLAHAAG 57 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L AA+E IH YSL+HDD+P MD+ +RRGKP+ H QYD+ TA++ G+ Sbjct: 58 ELCGAAPEKVDIAAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDA 117 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180 L T AF+ +++P + +++ L G +GM GGQ LD + ++++++ + Sbjct: 118 LQTLAFQSLATPGLCTDPGRQLEMVSLLAIASGSRGMAGGQAIDLDSVGKALEQSELEYM 177 Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL+ A GA A Q + + + +G+ FQ+ DD+LD E D Sbjct: 178 HIHKTGALIRAAALLGAHCANDLDQERLHAIDHYAQAIGLAFQVVDDILDAEADSE 233 >gi|327541916|gb|EGF28424.1| Polyprenyl synthetase [Rhodopirellula baltica WH47] Length = 315 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 83/250 (33%), Positives = 121/250 (48%), Gaps = 21/250 (8%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60 N L + ++ L + A + +RL +A+RYA L GK++R L Sbjct: 15 NESLKDYMDARRPAVEVAL-----EAACEDRPGVPERLAAAVRYAVLAPGKRLRPMLTIM 69 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + +A+ A+E IH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+AG Sbjct: 70 AAEACGGDAESAMPSAVAVEMIHAYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAG 129 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---- 176 + L + AF + + + + L+ +L G G++GGQ D+ E Sbjct: 130 DALQSMAFAHLHHSTSDATKS--AALIGTLATAAGPAGLVGGQADDLDAEKYTVEDFGGA 187 Query: 177 ------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + I KTGAL GAI A A N L + + G+ FQ+ DDLLDC Sbjct: 188 DAALKHLEAIHHRKTGALFTACAAMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDC 247 Query: 231 E---EDLPKK 237 E L K+ Sbjct: 248 TSTDEQLGKR 257 >gi|229543999|ref|ZP_04433058.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans 36D1] gi|229325138|gb|EEN90814.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans 36D1] Length = 320 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L S L+ + + I+ L + + A+ +Q Q ++ LL A GGK+IR V A Sbjct: 6 LYSFLKTDIELIEQELANAVASNAALIQ-QASESLLKA------GGKRIRPVFVLLGAKF 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + V A+E IH SL+HDD+ +D+ +RRGKPTV ++D A+ G+ +L Sbjct: 59 GDYEIERVKNVAVALELIHMASLVHDDV--IDDAELRRGKPTVKAKWDNRIAMYTGDYIL 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 A E I+ +++ + +L+ T G + Q+ D + K K Sbjct: 117 ATALEYITK-----VEDLSAHQILADTLVEVCVGEIE-QIKDKYRFHQNLRCYLRRIKRK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T L+ +C+ GAI + A +N +L FG N+G+ +Q+ DD+LD Sbjct: 171 TALLIAASCQLGAIASGADENIHRQLYRFGYNVGMSYQIIDDILDFTG 218 >gi|223043259|ref|ZP_03613306.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit 2) (spore germination protein c3) [Staphylococcus capitis SK14] gi|314933652|ref|ZP_07841017.1| heptaprenyl diphosphate synthase, component II [Staphylococcus caprae C87] gi|222443470|gb|EEE49568.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit 2) (spore germination protein c3) [Staphylococcus capitis SK14] gi|313653802|gb|EFS17559.1| heptaprenyl diphosphate synthase, component II [Staphylococcus caprae C87] Length = 319 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 23/228 (10%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLT 71 K+++ L+ + T ++ L S GGK++R V + Sbjct: 11 KKVEERLERAIQSTDQTLEEASFHLLSS-------GGKRVRPVFVILSSQFGTSEGTSED 63 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 RV A+E IH +L+HDD+ +D RRG+PT+ ++D+ TAI+ GN LL + + Sbjct: 64 TYRVAVALELIHMATLVHDDV--IDKSDKRRGRPTISKKWDQTTAILTGNFLLALGLQHL 121 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGAL 188 S K + R ++S + + + G++ QD+F E T KT L Sbjct: 122 SEIK-----DARVHSIISNS----IVDVCRGELFQFQDQFNSEQNITNYLRRINRKTALL 172 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + A E GAI + AS+ +L+ G +G+ FQ+ DD+LD K Sbjct: 173 IQLATEVGAITSGASKETIRKLKLIGHYIGMSFQIIDDVLDFTSSEKK 220 >gi|254521204|ref|ZP_05133259.1| geranyltranstransferase [Stenotrophomonas sp. SKA14] gi|219718795|gb|EED37320.1| geranyltranstransferase [Stenotrophomonas sp. SKA14] Length = 292 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 83/230 (36%), Positives = 120/230 (52%), Gaps = 10/230 (4%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64 + RI++ LD L A + RL A+RY++LGG K++R LV L Sbjct: 4 ETLFARWRDRIESELDAALPSPA-----EAPQRLHQAMRYSVLGGGKRMRPLLVYASGHL 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F A+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+AG+ L Sbjct: 59 FGAQLEHLDAAAMAVELIHAYSLVHDDLPAMDDDDLRRGKPTTHIAFDEATAILAGDALQ 118 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQK 182 AF +++ L +R + +L H G GM GGQ +D + + + Sbjct: 119 ARAFGLLADA--PLPATLRVACLQTLAHASGAAGMCGGQALDIDATGQQQTLAALTRMHA 176 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTGAL+ A GA+ A + + +L F + LG+ FQ+ DD+LD E Sbjct: 177 LKTGALIRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEA 226 >gi|332662624|ref|YP_004445412.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100] gi|332331438|gb|AEE48539.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100] Length = 323 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 11/224 (4%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 ID + L + + Y + LGGK++R L LF ++ AL Sbjct: 2 IDAYFQTFEDYRQQNSFDGQPTALYAPVNYIMELGGKRLRPILALMGYELFKADYRPALP 61 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + AIE H +SL+HDD+ MD +RRG+ TVH +++ AI++G+ +L YA++ + Sbjct: 62 LAYAIEIFHNFSLVHDDV--MDAAPLRRGQATVHTKWNLNAAILSGDVMLIYAYDYLLRL 119 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCF 191 + ++ + + GQ LDI E + + + ++KT L+ Sbjct: 120 DAPNRIAEIVKVFNRVAREV-----CEGQQLDIDFETRSDVSIPEYLRMIELKTSVLIAG 174 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 A E + A AS ++ + L FG N+GI FQL DD+LD D Sbjct: 175 ALEMAGLAAGASMDDVQHLYEFGRNVGIAFQLQDDILDTFGDAA 218 >gi|251791050|ref|YP_003005771.1| octaprenyl diphosphate synthase [Dickeya zeae Ech1591] gi|247539671|gb|ACT08292.1| Trans-hexaprenyltranstransferase [Dickeya zeae Ech1591] Length = 323 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALSYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLAS-----LRVMSVMSDAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A ++ AI++ AS ++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEDSYMRVIYSKTARLFEAAAQASAILSDASSEQELALQEYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|241912483|gb|ACS71955.1| putative geranylgeranyl pyrophosphate synthase [Azospirillum brasilense] Length = 338 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 21/238 (8%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL------------LGGKKIRSFLV 58 E +R T LDDL A + + N+ ++ + ++ GGK++R L Sbjct: 8 EPKRRKSTPLDDLTALVADDL-SAVNEIIVQRMHSSVDMIPQLAGYLIAAGGKRLRPVLT 66 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 A L + A +E IH +L+HDD+ +D +RRG + + + +++ Sbjct: 67 LAAAELCGYKGEDHKMLAAVVEFIHTATLLHDDV--VDESDLRRGLASANAVFGNKASVL 124 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 G+ L + +FE++ + + +LS + +G + Q+ D E Sbjct: 125 VGDFLFSRSFELMVEVGS-----LDVLRILSKASAVIAEGEVL-QLRTTNDTETSEQAYL 178 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + K KT L AC GA++A Q E+ L +G NLGI FQL DD+LD K Sbjct: 179 EVIKAKTAELFAAACRVGAVVAARPQAEELALYDYGMNLGIAFQLVDDVLDYSAKQAK 236 >gi|237809244|ref|YP_002893684.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187] gi|237501505|gb|ACQ94098.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187] Length = 296 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 88/232 (37%), Positives = 128/232 (55%), Gaps = 6/232 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 LQ S+ +DDLLLQ + RL +A+R+ L LGGK++R FLV S+ ++ Sbjct: 3 LQTFSQHYRQRIDDLLLQKIETLPDLSP-RLKAAMRHGLVLGGKRVRPFLVYATGSMLDI 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AAIECIH YSLIHDDLP+MD+ +RRG PTVH +DE TA++AG+ L T A Sbjct: 62 DEALLDGPAAAIECIHAYSLIHDDLPAMDDDDLRRGHPTVHKAFDEATAVLAGDALQTLA 121 Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMK 184 F I++ P + +++ +L G GM GGQ LD+ E + + +I + K Sbjct: 122 FSILADHPFPDALRTQQVKMLSTLAQASGYAGMCGGQALDLAAEGQHVGLEALELIHRHK 181 Query: 185 TGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 TGAL+ A GA+ + L+ + +G+ FQ+ DD+LD D Sbjct: 182 TGALIECAVMLGALCQQDVAAETVSALKKYAAAIGLAFQVQDDILDVVSDTE 233 >gi|78189407|ref|YP_379745.1| isoprenyl synthetase [Chlorobium chlorochromatii CaD3] gi|78171606|gb|ABB28702.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Chlorobium chlorochromatii CaD3] Length = 331 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 12/210 (5%) Query: 31 MQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 Q L + RY L G GK+IR FL + AL V A+E +H ++LIH Sbjct: 28 FSKQTPQTLYAPARYILEGKGKRIRPFLTLLACEAICGSPDDALDVALAVEILHNFTLIH 87 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ MD +R G+PTVH ++ AI+ G+ ++ YA+E+ K Q L Sbjct: 88 DDI--MDQAELRHGRPTVHKTWNVSAAILTGDMMIAYAYELALQSKGSR------QTELV 139 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNE 206 N + GQ LD++ E + + + KTG L+ A E+G + +A+ + Sbjct: 140 HILNDANITICEGQALDMELEEMPDASMSDYLDMIAKKTGRLISAALEAGGVAGNATDEQ 199 Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L FGE +G FQ+ DD LD + K Sbjct: 200 LRSLVLFGEKIGQAFQIQDDYLDIMAEAGK 229 >gi|145588381|ref|YP_001154978.1| farnesyltranstransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046787|gb|ABP33414.1| Farnesyltranstransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 334 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 10/187 (5%) Query: 48 LGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105 GGK++R L+ A L + A +E IH +L+HDD+ +D +RRG+ Sbjct: 49 AGGKRVRPALLMLVAKALANGKESAHTLEMAAVVEFIHTATLLHDDV--VDESTLRRGRE 106 Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165 T + + +++ G+ L + AF+++ +P +++R +LS N +G + Q+L Sbjct: 107 TANAAFGNAASVLVGDFLYSRAFQMMVAP-----NDLRVMQILSDATNTIAEGEVL-QLL 160 Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225 ++ D +DE + + KT L + E GAI+A A+ +++E+ FG ++G FQL D Sbjct: 161 NMNDPEVDEASYLQVIRYKTAKLFEASTELGAILASATDSQREQAAAFGRHIGTAFQLMD 220 Query: 226 DLLDCEE 232 DLLD Sbjct: 221 DLLDYTA 227 >gi|27262424|gb|AAN87493.1| Farnesyl pyrophosphate synthetase [Heliobacillus mobilis] gi|111075007|gb|ABH04860.1| polyprenyl diphosphate synthase [Heliobacillus mobilis] gi|155241755|gb|ABT18037.1| heptaprenyl diphosphate synthase [Heliobacillus mobilis] Length = 320 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 15/235 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M L +Q + +++ L + + + L + GGK++R V Sbjct: 1 MQSRLFQDIQNDLAKVEAELAKYADTSLPTLTAASSHLLHA-------GGKRLRPAFVLL 53 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 N + L + A+E IH SL+HDD+ +D RRG PTV ++ +I G Sbjct: 54 AGRFHNYSLERLLPLAVAMEMIHMASLVHDDV--VDESKTRRGIPTVKARWGNRISIHTG 111 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + L + +I+ + +++ + + QM D Sbjct: 112 DHLFARSLLLIAELNDDKISEVLAKVSVEMCKGEI------QQMSGTFDVNQTFRDYLFH 165 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 K KT L+ +C+ GA+ A + L+ +G +LG+ FQ+ DD+LD D Sbjct: 166 IKRKTALLISASCQLGAMAVKADPSIVRALKMYGHHLGMAFQVTDDILDLTADEA 220 >gi|146329727|ref|YP_001209836.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A] gi|146233197|gb|ABQ14175.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A] Length = 348 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 12/225 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSA---IRYAL-LGGKKIRSFLVTECASLFNVNHLT 71 I ++ + + QT MQ + + A +RYAL GK+ R L A + + Sbjct: 32 IQRLIANEMEQTERVMQREIYTEVALAQSVMRYALQAKGKRFRPMLHLLSAGVCDYRGDF 91 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 A A IE IH +L+HDD+ +D+ IRRG+ + HI + +I+ G+ L T AF+++ Sbjct: 92 APTAAAFIEFIHNATLLHDDV--VDSSDIRRGQASAHIIFSNAASILVGDFLYTRAFQLM 149 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 S N ++ N+ G + Q+ ++ + IDET + + ++KT L Sbjct: 150 VSSG-----NAAVLKTMADATNLIAAGEVM-QLANMHNPDIDETCYYRVIELKTAVLFSA 203 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 AC+ A +A S+ + L +G+ LG+ FQ+ DD+LD D K Sbjct: 204 ACKIAAQLAGVSEEKIAALADYGKKLGMAFQMIDDMLDYMGDESK 248 >gi|118576797|ref|YP_876540.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase [Cenarchaeum symbiosum A] gi|118195318|gb|ABK78236.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase [Cenarchaeum symbiosum A] Length = 321 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 3/199 (1%) Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94 RL +A + + GGK+ R +++ + A+ AIE IH ++L+HDD+ Sbjct: 21 PSRLYAAAAHLIEHGGKRFRPYMLIKSCQALGGKKSDAMPAATAIEMIHNFTLLHDDI-- 78 Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154 MDN IR G PTVH ++ AI+AG+ L + A+++IS P+ K R L+ Sbjct: 79 MDNDSIRHGVPTVHKKFGVPVAILAGDVLFSKAYQVISGPRVPEKRAARLTSRLAAACVD 138 Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +G L + + ++ M+ KT +L AC GAI + A + + R FG Sbjct: 139 VCEGQLYDMDMAEGAKLPTRSEYIMMIGKKTASLFGAACAMGAICSGADEKDARRFAAFG 198 Query: 215 ENLGIIFQLADDLLDCEED 233 LG+ FQ+ DDL+ D Sbjct: 199 TGLGVAFQITDDLIGITGD 217 >gi|26987423|ref|NP_742848.1| polyprenyl synthetase [Pseudomonas putida KT2440] gi|24982082|gb|AAN66312.1|AE016259_10 octylprenyl diphosphate synthase [Pseudomonas putida KT2440] Length = 322 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 8/186 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS + +G + Q+ + Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A +A A+ ++E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEED 233 LD + D Sbjct: 214 LDYKGD 219 >gi|322434675|ref|YP_004216887.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9] gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9] Length = 320 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 125/263 (47%), Gaps = 40/263 (15%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 + L+ + D L+ LL + A+R++ GGK++R L E A Sbjct: 6 DVKHLLKAGATLTDAALERLLP-----APDTLPHSIHRAMRHSTFAGGKRLRPILALEAA 60 Query: 63 SLFNVNHLTALRVGAAIE-----------CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111 + + LT A+E IH YSLIHDDLP++DN +RRG+PT H+ + Sbjct: 61 RMVSGGTLTP-----ALETAAAELGAALEMIHTYSLIHDDLPALDNDDLRRGQPTCHVVF 115 Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-----------QGML 160 E TAI+AG+ L T AF+ I++ + +S G+ GM+ Sbjct: 116 GEATAILAGDALQTLAFQTIANLHAPAATVVSILREVSAAVATGVGSVGDLHTSLPPGMI 175 Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQ-----NEKERLRCF 213 GGQ++DI+ E + V I + KTGAL+ + +G ++ Q + RLR F Sbjct: 176 GGQVMDIESEGVKPTAELVEAIHRAKTGALITVSVVAGGLLGLGDQPSTTHDTIARLRTF 235 Query: 214 GENLGIIFQLADDLLDCEEDLPK 236 G+ G+ FQ+ DD+LD +D + Sbjct: 236 GQKAGLAFQIVDDVLDMTQDSAQ 258 >gi|238650786|ref|YP_002916641.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic] gi|238624884|gb|ACR47590.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic] Length = 371 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 61/220 (27%), Positives = 116/220 (52%), Gaps = 11/220 (5%) Query: 15 RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70 +I L D + + + + + + ++ L+ + +Y L GGK+IR L A +F+ Sbjct: 50 KIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 109 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + +F++ Sbjct: 110 NHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 167 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 + + + I++ +L+ I +G + + + I + I K KT L Sbjct: 168 MVASGS-----IKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFG 222 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 AC GAI+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 223 TACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDY 262 >gi|15892647|ref|NP_360361.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7] gi|15619817|gb|AAL03262.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7] Length = 371 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 61/220 (27%), Positives = 115/220 (52%), Gaps = 11/220 (5%) Query: 15 RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70 +I L D + + + + + + ++ L+ + +Y L GGK+IR L A +F+ Sbjct: 50 KIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 109 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + +F++ Sbjct: 110 NHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 167 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 + + + I++ +L+ I G + + + I + I K KT L Sbjct: 168 MVASGS-----IKAMNVLAKASAIISAGEVVQLVKLNERRIITIDEYQQIVKSKTAELFG 222 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 AC GAI+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 223 TACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDY 262 >gi|37678653|ref|NP_933262.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] gi|37197393|dbj|BAC93233.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016] Length = 306 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 26 GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 83 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S NI +G + Q+++ Sbjct: 84 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNIIAEGEVL-QLMNCN 137 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A + L+ +G+ LG FQL DD++ Sbjct: 138 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 197 Query: 229 DCEED 233 D D Sbjct: 198 DYTSD 202 >gi|23014219|ref|ZP_00054047.1| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum magnetotacticum MS-1] Length = 339 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 57/230 (24%), Positives = 112/230 (48%), Gaps = 15/230 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L + ++++ ++++ + D + + Q +++A GGK++R L A Sbjct: 19 DALVALVKDDLEKVNRAIVDRMHSPV-ELIPQLAGHIIAA------GGKRLRPVLTLASA 71 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L +++ A +E IH +L+HDD+ +D +RRG+ + + + +++ G+ Sbjct: 72 KLAGHTGERHIKLAACVEFIHTATLLHDDV--VDESELRRGQASANALFGNKPSVLVGDF 129 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L + +FE++ + + +LS ++ +G + Q++ D E + + Sbjct: 130 LFSRSFELMVEDGS-----LSVLAILSHASSVIAEGEVL-QLITANDTETSEDSYLEVIR 183 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT AL AC GA++A + E+E L +G NLGI FQL DD+LD Sbjct: 184 SKTAALFAAACRIGAVVADRPKVEEEALESYGLNLGIAFQLIDDVLDYSA 233 >gi|34581601|ref|ZP_00143081.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246] gi|28262986|gb|EAA26490.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246] Length = 327 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 61/220 (27%), Positives = 116/220 (52%), Gaps = 11/220 (5%) Query: 15 RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70 +I L D + + + + + + ++ L+ + +Y L GGK+IR L A +F+ Sbjct: 6 KIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 65 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + +F++ Sbjct: 66 NHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 123 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 + + + I++ +L+ I +G + + + I + I K KT L Sbjct: 124 MVASGS-----IKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFG 178 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 AC GAI+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 179 TACAVGAIIAGQVDHISKDMQDFGKLLGTIFQVIDDLLDY 218 >gi|167031734|ref|YP_001666965.1| polyprenyl synthetase [Pseudomonas putida GB-1] gi|166858222|gb|ABY96629.1| Polyprenyl synthetase [Pseudomonas putida GB-1] Length = 322 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 8/186 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS + +G + Q+ + Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A +A A+ ++E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEEVYMEVIRGKTAMLFEASTHSAAALAEATDEQREALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEED 233 LD + D Sbjct: 214 LDYKGD 219 >gi|229552482|ref|ZP_04441207.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1] gi|258539852|ref|YP_003174351.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705] gi|229314219|gb|EEN80192.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1] gi|257151528|emb|CAR90500.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705] Length = 283 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 17/234 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L + I+ LD+ L T N L +A+ Y++ GGK++R L+ ++++ Sbjct: 5 LTDWQTAINHALDEQLA-------TVANPHLRAAMAYSVDAGGKRLRPLLLLSIVAMYDG 57 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 AL A+E +H YSLIHDDLP+MDN +RRG+PT H Q+ E AI+AG+ LLT A Sbjct: 58 VVAEALPAATALEFVHTYSLIHDDLPAMDNDDLRRGQPTNHKQFGEALAILAGDALLTDA 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185 F I+S + + + L G GM+ GQ+LD+ E D + + + KT Sbjct: 118 FAILSQHYPEKGAAL----VQILAEAAGSSGMVAGQVLDMDGEQTQYDLATLKQMHQAKT 173 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 GAL+ G++ + ++ L F G+ FQ+ DD+ D +L K Sbjct: 174 GALIQAGVAMGSLFVAIPEADQVALADFAAAFGLGFQIKDDINDVTKTTAELGK 227 >gi|237809123|ref|YP_002893563.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187] gi|237501384|gb|ACQ93977.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187] Length = 323 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 10/205 (4%) Query: 30 HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87 + + Q + L++ + Y ++ GGK+IR L A + + IE IH +L Sbjct: 22 YQRLQSDVALVNQLAYYIISGGGKRIRPLLAVLSARAIGYQGDAHISLATIIEFIHTATL 81 Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147 +HDD+ +D +RRG+ T + + +++ G+ L T AF+++ N+R + Sbjct: 82 LHDDV--VDESVLRRGRDTANQLFGNAASVLVGDFLHTRAFQMMVELG-----NMRIMQL 134 Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 LS N+ +G + Q+++ D E + KT L A AI+A+ + + Sbjct: 135 LSEATNLIAEGEVM-QLMNCNDPSTTEDNYLQVIYCKTAKLFEAATHCAAILANQPAHIE 193 Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232 + LR +G+ LG FQL DD++D Sbjct: 194 QALRDYGKYLGTAFQLIDDVMDYSS 218 >gi|325913420|ref|ZP_08175786.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B] gi|325477189|gb|EGC80335.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B] Length = 288 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 72/236 (30%), Positives = 114/236 (48%), Gaps = 22/236 (9%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69 RI++ L + L T ++ + + Y+ L GGK++R L + + Sbjct: 10 YLPRINSFLKEQLECTI------NDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +++ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + Sbjct: 64 EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184 I+ +L+ +T IG GM GGQ +DI +ET + ++ +K Sbjct: 124 WIAEASNS------YELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLK 177 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237 TG L+ + + A A++S + L F E G +Q+ DD++D + KK Sbjct: 178 TGCLIVASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233 >gi|229586816|ref|YP_002845317.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5] gi|228021866|gb|ACP53574.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5] Length = 371 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 63/225 (28%), Positives = 119/225 (52%), Gaps = 14/225 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLF 65 ++Q++ K T L++L++ ++ L+ + +Y L GGK+IR L A +F Sbjct: 50 EIQQDLKDEVTKLNNLIISCLK-----SDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 104 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + Sbjct: 105 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 162 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 +F+++ + + I++ +L+ I +G + + + I + I K KT Sbjct: 163 QSFKLMVASGS-----IKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKT 217 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 L AC GAI+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 218 AELFGTACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDY 262 >gi|222480459|ref|YP_002566696.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239] gi|222453361|gb|ACM57626.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 348 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 36/253 (14%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL- 64 ++E + ++ +D+ + QH +RL A RY L GGK++R + T A Sbjct: 12 EAIRERRELVNAAIDE-------ELPVQHPERLYEATRYILEAGGKRLRPTVTTLAAEAV 64 Query: 65 ---------------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109 + N + +R AIE I ++LIHDD+ MD +RRG P VH Sbjct: 65 TGTDPLSADFREFAALDGNTVDVMRAAVAIEVIQSFTLIHDDI--MDEDDLRRGVPAVHE 122 Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169 QYD TAI+AG+ L + AFE ++ + + + + ML+ T + GQ LD+ Sbjct: 123 QYDISTAILAGDTLYSKAFEFMTETGSDPANGLEAMRMLATT----CTEICEGQSLDVSF 178 Query: 170 EFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 E D+ + + ++KT L + + A++ A + L +G + G FQ+ DD Sbjct: 179 ESRDDILPEEYLEMVELKTAVLYGASAATPAVLLGADDEVVDALYQYGIDSGRAFQIQDD 238 Query: 227 LLDCE---EDLPK 236 +LD E+L K Sbjct: 239 VLDLTVASEELGK 251 >gi|303247299|ref|ZP_07333573.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ] gi|302491458|gb|EFL51346.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ] Length = 299 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 127/235 (54%), Gaps = 6/235 (2%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + +L + ++ + + A + + LLSA+ Y+L+ GGK++R L A Sbjct: 3 VKERLAAQAAEVEVYIRERF--GARMRERGVPEGLLSAMEYSLMAGGKRLRPCLCLSFAE 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF + + A E IH YSLIHDDLP+MD+ +RRG+P+ H + E AI+AG+ L Sbjct: 61 LFGAPRASVMPFAAGFELIHTYSLIHDDLPAMDDDDLRRGRPSNHKVFGEAGAILAGDAL 120 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMI 180 LT AF +S + + + G GM+GGQMLD++ + + ++ + Sbjct: 121 LTEAFGCMSRSWPAVAAELVLPALAEAGRAAGAAGMVGGQMLDMEFTARQGVTLAELAHM 180 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q +KTGAL+ +C GAI+A A+++ R R +GE +G FQ+ DD+LD D Sbjct: 181 QALKTGALITASCVCGAILAGAAEDGISRAREYGEAVGAAFQIVDDILDEVGDAA 235 >gi|197119777|ref|YP_002140204.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem] gi|197089137|gb|ACH40408.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem] Length = 322 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 10/225 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + I L ++ LQ +Q+ + Y L GGK+IR LV A L Sbjct: 1 MDAALALIGEDLKNVELQFKKDLQSDVP-LIRKVGEYVLSSGGKRIRPGLVLLAARLCGY 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + ++ + + +E IH +L+HDD+ +DN +RRG + + + +++ G+ L + + Sbjct: 60 DGNRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASANTLWGNEASVLVGDFLFSKS 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F ++ + ++R +L+ I +G + Q++ D I + + + KT Sbjct: 118 FSLMVTDG-----DLRILKVLADATTIIAEGEVL-QLVCTSDLDITVERYIEVVRSKTAI 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ ACE GAI+ A ++ L +G +LGI FQL DD LD Sbjct: 172 LLSAACEVGAILGEADPVHRQALADYGMDLGIAFQLMDDTLDYTA 216 >gi|58337602|ref|YP_194187.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus acidophilus NCFM] gi|227904242|ref|ZP_04022047.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796] gi|58254919|gb|AAV43156.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus acidophilus NCFM] gi|227867890|gb|EEJ75311.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796] Length = 289 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 76/222 (34%), Positives = 120/222 (54%), Gaps = 17/222 (7%) Query: 19 ILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRV 75 ++D+ L A H+ ++ +D ++ + Y+++ GGK++R L + + +R+ Sbjct: 14 VIDNYL---AKHLASEIDDQKISQIMSYSVMAGGKRLRPLLFLATLNALGKKIEESEIRL 70 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 71 ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGVQWIAEGS 130 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMC 190 S+L++ +T IG GM+GGQ LDI DE + ++ +KTG L+ Sbjct: 131 NS------SELVIMITKAIGANGMVGGQYLDIDSTNNASVADDEKFINKMEWLKTGCLIQ 184 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E A+ A AS E+ +L F + G +Q+ DDL+D E Sbjct: 185 ASVEMAAVYAKASDIEQVKLVDFAKTFGRSYQIYDDLVDVVE 226 >gi|15604342|ref|NP_220858.1| octaprenyl-diphosphate synthase (ispB) [Rickettsia prowazekii str. Madrid E] gi|3861034|emb|CAA14934.1| OCTAPRENYL-DIPHOSPHATE SYNTHASE (ispB) [Rickettsia prowazekii] gi|292572096|gb|ADE30011.1| Octaprenyl-diphosphate synthase [Rickettsia prowazekii Rp22] Length = 327 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 16/226 (7%) Query: 8 KLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 K+Q+N K T L+DL+ L++ + + + L+ A GGK+IR L A + Sbjct: 6 KIQQNLKDEVTQLNDLIISCLKSDAELIEKVGKYLVEA------GGKRIRPLLTIITAKM 59 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F+ +++ +A+E IH +L+HDD+ +DN +RR KPT ++ + T+I+ G+ L Sbjct: 60 FDYKGNNHIKLASAVEFIHAATLLHDDV--VDNSTLRRFKPTANVIWGSKTSILVGDFLF 117 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + +F+++ + I++ +L+ I +G + + + I + I K K Sbjct: 118 SQSFKLMVASGC-----IKAMNVLAKASVIISEGEVVQLVKLNERRIITIDEYQQIVKSK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 T L ACE GAI+A + ++ FG LG IFQ+ DDLLD Sbjct: 173 TAELFGAACEVGAIIAEQVDRVSKDVQNFGRLLGTIFQVIDDLLDY 218 >gi|54307607|ref|YP_128627.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum SS9] gi|46912030|emb|CAG18825.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum SS9] Length = 323 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 9/189 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + A +E IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPMLVVLAARALGYQGDKHITAAAFVEFIHTATLLHDDV--VDESDMRRGKDTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+ +S + L+ +G LG FQL DD+L Sbjct: 155 DPNTTEDNYMQVIYSKTARLFEAATQISAIITESSTEVEVALQDYGRYLGTAFQLIDDVL 214 Query: 229 DCEEDLPKK 237 D D K+ Sbjct: 215 DYVAD-GKE 222 >gi|148545964|ref|YP_001266066.1| polyprenyl synthetase [Pseudomonas putida F1] gi|148510022|gb|ABQ76882.1| Polyprenyl synthetase [Pseudomonas putida F1] Length = 322 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 8/186 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS + +G + Q+ + Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A +A A+ ++E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEED 233 LD + D Sbjct: 214 LDYKGD 219 >gi|238756420|ref|ZP_04617729.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473] gi|238705350|gb|EEP97758.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473] Length = 323 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + +++ A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALDYQGNKHIKIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTSLES-----LRVLQLMSEATNVIAEGEVM-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S +I+A AS ++ + +G LG FQL DDLL Sbjct: 155 NPDITEDSYMRVIYSKTARLFEAASQSSSILADASPEQEMAFQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|76818772|ref|YP_335377.1| geranyltranstransferase [Burkholderia pseudomallei 1710b] gi|126458601|ref|YP_001075667.1| geranyltranstransferase [Burkholderia pseudomallei 1106a] gi|167725531|ref|ZP_02408767.1| polyprenyl synthetase [Burkholderia pseudomallei DM98] gi|167828246|ref|ZP_02459717.1| polyprenyl synthetase [Burkholderia pseudomallei 9] gi|167849704|ref|ZP_02475212.1| polyprenyl synthetase [Burkholderia pseudomallei B7210] gi|242313506|ref|ZP_04812523.1| geranyltranstransferase [Burkholderia pseudomallei 1106b] gi|254264895|ref|ZP_04955760.1| geranyltranstransferase [Burkholderia pseudomallei 1710a] gi|76583245|gb|ABA52719.1| geranyltranstransferase [Burkholderia pseudomallei 1710b] gi|126232369|gb|ABN95782.1| geranyltranstransferase [Burkholderia pseudomallei 1106a] gi|242136745|gb|EES23148.1| geranyltranstransferase [Burkholderia pseudomallei 1106b] gi|254215897|gb|EET05282.1| geranyltranstransferase [Burkholderia pseudomallei 1710a] Length = 322 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 121/230 (52%), Gaps = 14/230 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68 + ++ + LD +L + L +A+RYA+ GG K++R L L + + Sbjct: 34 KTAIRQTEATLDRILPCADGRLTA-----LHAAMRYAVFGGGKRLRPLLCHAAGELVDAS 88 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 +V A IE IH +SLI DDLP+MDN +R G+ T+H QYD TA++A +GL++ AF Sbjct: 89 REALAQVSAVIEMIHVFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAF 148 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTG 186 +S L ++R LM L +IG G+ GGQ +D+ +D T++ + +MKTG Sbjct: 149 LALSEAPLPL--DVRVALMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMHRMKTG 206 Query: 187 ALMCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLADDLLDCEE 232 AL+ A G + E + +GE LG+ +Q+ DD+LD Sbjct: 207 ALIRAAVRMGVLCGTVPGAELGAAWRAVSEYGERLGLAYQVVDDILDSTA 256 >gi|326793607|ref|YP_004311427.1| trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1] gi|326544371|gb|ADZ89591.1| Trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1] Length = 329 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 115/236 (48%), Gaps = 22/236 (9%) Query: 15 RIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNH- 69 +I ++ D Q ++ +Q L+ I Y ++ GGK++R +V A Sbjct: 5 KIHDVVADEFSQVNDYILSQLKSEIPLIEQIGYYIISNGGKRMRPLMVLLAARAAQPAQG 64 Query: 70 ------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +++ + IE IH +L+HDD+ +D +RRGK T + ++ +++ G+ L Sbjct: 65 LSETQLSHTVKMASIIEFIHTATLLHDDV--VDESDMRRGKKTANEEWGNAPSVLVGDFL 122 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + AF+I+ + + + +LS T NI +G + Q+++ D E + + Sbjct: 123 YSRAFQIMVNVGS-----VPCMEILSNTTNIISEGEV-QQLINCGDPDTSEESYLKVIQY 176 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 KT L A GA++A AS+ ++ L+ +G +G FQL DD++D E++ K Sbjct: 177 KTAKLFEGAALCGAVVAGASEEHQKALQAYGMYVGTAFQLVDDVMDYVSTAEEMGK 232 >gi|261493062|ref|ZP_05989602.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496350|ref|ZP_05992745.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307994|gb|EEY09302.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311282|gb|EEY12445.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 335 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 12/225 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLL---SAIRYALLGG-KKIRSFLVTECASLFNV 67 + ++I + ++ + + + Q N +L Y + GG K+IR + A Sbjct: 10 SLEQIQALANEDMQAVNAEILAQLNSEVLLINQLGHYIIAGGGKRIRPLIAVLAARALGY 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + A IE +H +L+HDD+ +D +RRG+PT + + +++ G+ + T + Sbjct: 70 RGKKHITAAAFIEFVHTATLLHDDV--VDESDMRRGRPTANAHFGNAASVLVGDFIYTRS 127 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++ D++R ++S N +G + Q++++ D E + KT Sbjct: 128 FQMMTDL-----DSLRVLKVMSAATNALAEGEV-QQLMNVNDPNTTEANYMRVIYNKTAR 181 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L A + AI+A AS+ + L+ +G LG FQL DD+LD Sbjct: 182 LFEAATQCVAIVADASEEIETALKNYGCYLGTAFQLIDDILDYSA 226 >gi|329113331|ref|ZP_08242112.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001] gi|326697156|gb|EGE48816.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001] Length = 356 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDN 97 A GGK++R L A + N+ + + A +E IH +L+HDD+ +D+ Sbjct: 64 AAHLVAAGGKRLRPLLTLAAARMCGYNNQDGRMRHVEIAACVEFIHTATLLHDDV--VDD 121 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG + + + +++ G+ L +F+I+++ ++ +LS + Sbjct: 122 SQLRRGLASANAIFGNKASVLVGDFLFARSFQILTA-----DASLGVMAILSAASATLAE 176 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 G + QM D Q + KT AL ACESGA++ A+ ++E LR +G NL Sbjct: 177 GEVM-QMTTQNDLSTSVDQYLQVIYGKTAALFAAACESGAVIGEATPEQREALRMYGANL 235 Query: 218 GIIFQLADDLLDCEED---LPKK 237 G+ FQL DD LD D L K+ Sbjct: 236 GMAFQLVDDALDYAADQATLGKE 258 >gi|206578772|ref|YP_002236401.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342] gi|288933385|ref|YP_003437444.1| dimethylallyltranstransferase [Klebsiella variicola At-22] gi|290511564|ref|ZP_06550933.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55] gi|206567830|gb|ACI09606.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342] gi|288888114|gb|ADC56432.1| Dimethylallyltranstransferase [Klebsiella variicola At-22] gi|289776557|gb|EFD84556.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55] Length = 323 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 27 SDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++ + ++ ++S Sbjct: 87 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTQLGS-----LKILEVMSEAV 139 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + ++A S E+ L+ Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAASQCAGMLADCSAEEERALQD 198 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 199 YGRYLGTAFQLIDDLLDYSSD 219 >gi|242240764|ref|YP_002988945.1| octaprenyl diphosphate synthase [Dickeya dadantii Ech703] gi|242132821|gb|ACS87123.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech703] Length = 323 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLSS-----LRVLAVMSDAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI+A A + LR +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSAILADADTTCENALRDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYNAD 219 >gi|329997657|ref|ZP_08302894.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3] gi|328538933|gb|EGF64988.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3] Length = 323 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 27 SDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++ + ++ ++S Sbjct: 87 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTQLGS-----LKILEVMSEAV 139 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + ++A + E+ L+ Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAASQCAGLLADCTAEEERALQD 198 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 199 YGRYLGTAFQLIDDLLDYSSD 219 >gi|294664721|ref|ZP_06730051.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605499|gb|EFF48820.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 291 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 9/233 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 M+ L + ++R L+ T RL +A+R+A+LGG K++R LV Sbjct: 1 MSSALFDRWIARTER--------SLEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVY 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +LF A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+A Sbjct: 53 ASGALFGAAEDQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILA 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L T AFE++++ + + L+ +D + + Sbjct: 113 GDALQTRAFELLATAPASAELRVGWMQSLANAAGAAGMCGGQALDIDATGQLQSLQHLQR 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + +KTGAL+ A GA+ A+ +++RL F + LG+ FQ+ DD+LD E Sbjct: 173 MHALKTGALIRAAVRMGALTGGAAAADQQRLDEFADALGLAFQVRDDILDVES 225 >gi|224080676|ref|XP_002306207.1| predicted protein [Populus trichocarpa] gi|222849171|gb|EEE86718.1| predicted protein [Populus trichocarpa] Length = 258 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 7/199 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75 T++ ++ + + Q+ D++ A+RY++L G K+ + LF N L A Sbjct: 60 TLIGEINQELDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRLAAFPT 119 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133 A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG+ L F I S Sbjct: 120 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGFSHIVSQT 179 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 P + + +++ + +G +GM GQ LD++ V +Q+ K G + + Sbjct: 180 PSDLVPEPRLLRVIAEIARAVGSRGMAAGQFLDLEG---GPNAVEFVQEKKYGEMGECSA 236 Query: 194 ESGAIMAHASQNEKERLRC 212 G ++A A+ +E R Sbjct: 237 VCGGLLAGATDDEIRRYEE 255 >gi|291459864|ref|ZP_06599254.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417654|gb|EFE91373.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str. F0262] Length = 317 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 21/220 (9%) Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCYSLIH 89 + A+ Y+LL GGK++R L+ E LF+ A +E IH +SL H Sbjct: 33 EVTEAMNYSLLSGGKRLRPILILESYELFSPKEERDRLLRPLLYAFMAGMEMIHSFSLCH 92 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--------PKTQLKDN 141 DDLP MD RRG+ + +Y E +AG+GL YAF+++S P + Sbjct: 93 DDLPCMDGDRYRRGRKSTWYRYGEAMGTLAGDGLSLYAFQLVSKTAAEGFLKPGFSRYAS 152 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIM 199 ++ + L+ + G+ GMLGGQ D++ + + E ++ +I + KT AL+ A GA++ Sbjct: 153 DVNEAVRLLSSSAGIHGMLGGQAADVRKTGQEMGEEELLLIYERKTAALISGALSIGALL 212 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236 A AS LR + LG+ FQ+ DD+LD E +L K Sbjct: 213 AGASAESIALLREISKALGLAFQIRDDILDESGAEAELGK 252 >gi|17547542|ref|NP_520944.1| octaprenyl-diphosphate synthase [Ralstonia solanacearum GMI1000] gi|17429846|emb|CAD16530.1| probable octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum GMI1000] Length = 322 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + E+ +D ++ L + + Q + ++SA GGK++R ++ A+ Sbjct: 6 LLAPVAEDMHAVDAVIRRRLGSEVA-LINQIGEYIISA------GGKRLRPVILLLMANA 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 59 LGYRGQHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTANAVFGNAASVLVGDFLY 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + AF+++ D++R +L+ N+ +G + Q+L++ D + E + + + K Sbjct: 117 SRAFQMMVQA-----DSMRVMQILADATNVISEGEVL-QLLNMHDPDVTEERYLQVIRYK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T L A + GA+++ A + +G +G FQ+ DDLLD Sbjct: 171 TAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 218 >gi|262172465|ref|ZP_06040143.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] gi|261893541|gb|EEY39527.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio mimicus MB-451] Length = 323 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|261839715|gb|ACX99480.1| geranyltranstransferase (ispA) [Helicobacter pylori 52] Length = 303 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 73/231 (31%), Positives = 122/231 (52%), Gaps = 15/231 (6%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV----- 67 +R ++ L+ L H+++ H + L GGK+ R L +L Sbjct: 14 ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSN 69 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+ Sbjct: 70 QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S+ + L+ +I +L+ L+ N G++GM+ GQ LD E + Q+ + + KT Sbjct: 130 FELLSN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLSLEQLTFLHEHKT 187 Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ + G + + + + L+ FG G+ FQ+ DD++D +D Sbjct: 188 AKLISASLMMGLVASGIKDEGLFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238 >gi|269123398|ref|YP_003305975.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112] gi|268314724|gb|ACZ01098.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112] Length = 282 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 15/236 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 + LQ K ID + +L + S + + Y LLGGK+IR ++ A+ Sbjct: 1 MEIYLQNIRKDIDKSIRKVLKKHKSI------KEIDDMLEYGVLLGGKRIRPSIMYILAN 54 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 ++ + +IE IH YSLIHDDLP MDN RRG TVH +Y E A++ G+ L Sbjct: 55 VYKKDKKCIENEAVSIELIHAYSLIHDDLPCMDNDNYRRGNLTVHKKYGEANAVLVGDAL 114 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 LT AF +++ + K +I + ++ G +GM+ GQ LD+ +E I+ ++ I Sbjct: 115 LTLAFSVLAESEYSNKYSIVAL-----SYYSGHKGMILGQYLDLLNENKADINFDELMEI 169 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KT L+ + E AI + + LR + LG+ +Q+ DD+L+ E K Sbjct: 170 HLNKTAMLLMASVEIAAISLSINTEARNALRKYILYLGLAYQIQDDILEMESSFEK 225 >gi|78223658|ref|YP_385405.1| polyprenyl synthetase [Geobacter metallireducens GS-15] gi|78194913|gb|ABB32680.1| Polyprenyl synthetase [Geobacter metallireducens GS-15] Length = 322 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 9/190 (4%) Query: 44 RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 Y L GGK+IR L+ A L + + + IE IH +L+HDD+ +DN +RR Sbjct: 35 EYVLASGGKRIRPTLLLLAAKLCGYTGDRHVPLASVIEFIHTATLLHDDV--VDNATLRR 92 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G + + + +++ G+ L + +F ++ ++R ++S I +G + Sbjct: 93 GNASANEVWGNEASVLVGDFLFSKSFSLMVQAG-----DLRVLKVISDATTIIAEGEVL- 146 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q+L D + + + K KT L+ ACE+GAI+ A+ ++ LR FG +LGI FQ Sbjct: 147 QLLCTSDLDMTLERYIEVVKSKTAVLLSAACEAGAILGKATPEQELALRDFGMDLGIAFQ 206 Query: 223 LADDLLDCEE 232 L DD LD Sbjct: 207 LMDDTLDYTA 216 >gi|300702983|ref|YP_003744585.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957] gi|299070646|emb|CBJ41941.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957] Length = 322 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + E+ +D ++ L + + Q + ++SA GGK++R ++ A+ Sbjct: 6 LLAPVAEDMHAVDAVIRRRLGSEVA-LINQIGEYIISA------GGKRLRPVILLLMANA 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 59 LGYRGNHHHELAAVVEFIHTATLLHDDV--VDESELRRGRQTANAVFGNAASVLVGDFLY 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + AF+++ D++R +L+ N+ +G + Q+L++ D + E + + + K Sbjct: 117 SRAFQMMVQA-----DSMRVMQILADATNVISEGEVL-QLLNMHDPDVTEERYLQVIRYK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T L A + GA+++ A + +G +G FQ+ DDLLD Sbjct: 171 TAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 218 >gi|153825628|ref|ZP_01978295.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2] gi|149740658|gb|EDM54765.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2] Length = 304 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 24 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 81 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 82 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 135 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 136 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 195 Query: 229 DCEED 233 D D Sbjct: 196 DYTSD 200 >gi|153802102|ref|ZP_01956688.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3] gi|124122346|gb|EAY41089.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3] Length = 348 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 68 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 125 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 126 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 179 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 180 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 239 Query: 229 DCEED 233 D D Sbjct: 240 DYTSD 244 >gi|315162955|gb|EFU06972.1| geranyltranstransferase [Enterococcus faecalis TX0645] Length = 293 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIYAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTLFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|152972111|ref|YP_001337257.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896694|ref|YP_002921439.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae NTUH-K2044] gi|262042746|ref|ZP_06015900.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150956960|gb|ABR78990.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549021|dbj|BAH65372.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039971|gb|EEW41088.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 323 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 27 SDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++ + ++ ++S Sbjct: 87 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTQLGS-----LKILEVMSEAV 139 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + ++A + E+ L+ Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAASQCAGLLADCTAEEERALQD 198 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 199 YGRYLGTAFQLIDDLLDYSSD 219 >gi|254363100|ref|ZP_04979154.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213] gi|153094987|gb|EDN75550.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213] Length = 315 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 9/190 (4%) Query: 44 RYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 Y + GG K+IR + A + A IE +H +L+HDD+ +D +RR Sbjct: 25 HYIIAGGGKRIRPLIAVLAARALGYRGKKHITAAAFIEFVHTATLLHDDV--VDESDMRR 82 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G+PT + + +++ G+ + T +F++++ D++R ++S N +G + Sbjct: 83 GRPTANAHFGNAASVLVGDFIYTRSFQMMTDL-----DSLRVLKVMSAATNALAEGEV-Q 136 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q++++ D E + KT L A + AI A AS+ + L+ +G LG FQ Sbjct: 137 QLMNVNDPNTTEANYMRVIYNKTARLFEAATQCVAIAADASEEIETALKNYGCYLGTAFQ 196 Query: 223 LADDLLDCEE 232 L DD+LD Sbjct: 197 LIDDILDYSA 206 >gi|104780055|ref|YP_606553.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48] gi|95109042|emb|CAK13738.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48] Length = 322 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS + +G + Q+ + Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A +A AS ++E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEEIYMDVIRGKTAMLFEASTHSAAALAGASDEQREALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD + D Sbjct: 214 LDYKGDSE 221 >gi|59710884|ref|YP_203660.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114] gi|59478985|gb|AAW84772.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114] Length = 323 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T +F++++S + I+ ++S N+ +G + Q+++ Sbjct: 101 AEFGNAASVLVGDFIYTRSFQMMTSLGS-----IKILSLMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A Q + L+ +G+ LG FQL DD++ Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILNDAPQEIETALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|332528440|ref|ZP_08404432.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624] gi|332042119|gb|EGI78453.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624] Length = 316 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 106/221 (47%), Gaps = 17/221 (7%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72 + +D ++ + L + RY + GGK++R L+ + + Sbjct: 2 REVDRVISERLDSGV--------PLVGQVARYIIGAGGKRLRPALLLLVSGALDYRGPHR 53 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + A +E IH +L+HDD+ +D+ +RRG PT + + +++ G+ L + AF+++ Sbjct: 54 HSLAAVVEFIHTATLLHDDV--VDDSKLRRGNPTANETFGNAASVLVGDFLYSRAFQMMV 111 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 ++ +R +L+ N+ +G + Q++++ + ++E + + KT L + Sbjct: 112 EAQS-----MRVMEVLAEATNVIAEGEV-QQLMNMHNADLNEAGYVHVIRSKTAKLFEAS 165 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAI+A A + + +G+ LG FQ+ DD+LD D Sbjct: 166 ARCGAILAGADKTLEAACADYGQALGTAFQVIDDVLDYAGD 206 >gi|296104900|ref|YP_003615046.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059359|gb|ADF64097.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 323 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 QGKAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + I+A + +++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGILAGCTAAQEKGLQDYGRYLGTAFQLIDDLLDYSAD 219 >gi|51594815|ref|YP_069006.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP 32953] gi|153949434|ref|YP_001402567.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP 31758] gi|170025973|ref|YP_001722478.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis YPIII] gi|186893824|ref|YP_001870936.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis PB1/+] gi|51588097|emb|CAH19703.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP 32953] gi|152960929|gb|ABS48390.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP 31758] gi|169752507|gb|ACA70025.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII] gi|186696850|gb|ACC87479.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+] Length = 323 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLVARALNYQGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLQS-----MRVLTLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S AI++ AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEESYMQVIYSKTARLFEAAAQSAAILSDASEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + Sbjct: 215 DYSAE 219 >gi|229512636|ref|ZP_04402105.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] gi|229350313|gb|EEO15264.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TMA 21] Length = 323 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|207744381|ref|YP_002260773.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum IPO1609] gi|206595786|emb|CAQ62713.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase) protein [Ralstonia solanacearum IPO1609] Length = 338 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + E+ +D ++ L + + Q + ++SA GGK++R ++ A+ Sbjct: 36 LLAPVAEDMHAVDAVIRRRLGSEVA-LINQIGEYIISA------GGKRLRPVILLLMANA 88 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 89 LGYRGNHHYELAAVVEFIHTAALLHDDV--VDESELRRGRQTANAVFGNAASVLVGDFLY 146 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + AF+++ D++R +L+ N+ +G + Q+L++ D + E + + + K Sbjct: 147 SRAFQMMVQA-----DSMRVMQILADATNVISEGEVL-QLLNMHDPDVTEERYLQVIRYK 200 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T L A + GA+++ A + +G +G FQ+ DDLLD Sbjct: 201 TAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 248 >gi|171463010|ref|YP_001797123.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192548|gb|ACB43509.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 334 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 17/221 (7%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLT 71 K +D ++ L + + Q + ++ A GGK++R L+ A Sbjct: 22 KALDEVIRQRLASKVA-LIDQISTYIIQA------GGKRVRPALLMLVAKALANGKQTPH 74 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 L + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF+++ Sbjct: 75 ILEMSAVVEFIHTATLLHDDV--VDESTLRRGRKTANAAFGNAASVLVGDFLYSRAFQMM 132 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 P +++R +LS N +G + Q+L++ D +DE + + KT L Sbjct: 133 VDP-----NDLRVMQILSDATNTIAEGEVL-QLLNMNDPEVDEESYLQVIRYKTAKLFEA 186 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E GAI+A+A+ ++E+ FG ++G FQL DDLLD Sbjct: 187 STELGAILANATNAQREQAAAFGRHIGTAFQLMDDLLDYTA 227 >gi|258623396|ref|ZP_05718400.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573] gi|258584362|gb|EEW09107.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573] Length = 348 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 68 GGKRLRPLLAVLSAKALGYHGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 125 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 126 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 179 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 180 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 239 Query: 229 DCEED 233 D D Sbjct: 240 DYTSD 244 >gi|294634497|ref|ZP_06713032.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685] gi|291092011|gb|EFE24572.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685] Length = 323 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALHYQGDRHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLQS-----LRILELMSAATNVIAEGEVM-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A + AI+A A +++ L+ +G LG FQL DDLL Sbjct: 155 DPDISEENYMQVIYSKTARLFEAAAQCSAILAGADTHQELALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + D Sbjct: 215 DYDAD 219 >gi|154686522|ref|YP_001421683.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus amyloliquefaciens FZB42] gi|154352373|gb|ABS74452.1| HepT [Bacillus amyloliquefaciens FZB42] Length = 349 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 13/225 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 ++ +D + + +++ + L A + L GGK+IR V + + Sbjct: 39 LNDDIDVIERELEQTVRSDYP-LLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKY 97 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 V +E IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+ +L + E+++ Sbjct: 98 VAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRL 155 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 D ++ +LS T G + Q+ D + + K KT L+ +C+ Sbjct: 156 -----DEPKAHRILSKTIVEVCLGEIE-QIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQ 209 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 GAI + A + + L FG +G+ +Q+ DD+LD EE+L K Sbjct: 210 LGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 254 >gi|311277840|ref|YP_003940071.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] gi|308747035|gb|ADO46787.1| Polyprenyl synthetase [Enterobacter cloacae SCF1] Length = 323 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 12/226 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 N ++I+ + + + + Q N +L++ + Y ++ GGK+IR + A Sbjct: 2 NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T A Sbjct: 62 QGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++S + ++ ++S N+ +G + Q++++ D I E + KT Sbjct: 120 FQMMTSLGS-----LKILEVMSEAVNVIAEGEVL-QLMNVNDPDITEESYMRVIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + ++A S +++ L+ +G LG FQL DDLLD D Sbjct: 174 LFEAAAQCSGLLAGCSDAQEKGLQDYGRYLGTAFQLIDDLLDYSSD 219 >gi|197333941|ref|YP_002155036.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11] gi|197315431|gb|ACH64878.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11] Length = 323 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T +F++++S + I+ ++S N+ +G + Q+++ Sbjct: 101 AEFGNAASVLVGDFIYTRSFQMMTSLGS-----IKILSLMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A Q + L+ +G+ LG FQL DD++ Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILNDAPQEIETALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|303233683|ref|ZP_07320337.1| polyprenyl synthetase [Finegoldia magna BVS033A4] gi|302495117|gb|EFL54869.1| polyprenyl synthetase [Finegoldia magna BVS033A4] Length = 269 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 78/232 (33%), Positives = 120/232 (51%), Gaps = 17/232 (7%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67 +E K I+ L +L + ND++ A++Y L+ G K++R L +FN Sbjct: 4 KEIVKLINNSLKEL---------SFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNE 54 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + +IE IH YSL+HDDL MD+ RRGK TVH +Y E A++ G+ LL Y+ Sbjct: 55 SISEPMNYALSIELIHNYSLVHDDLECMDDDDYRRGKLTVHKKYGEDIAVLVGDALLNYS 114 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 FE++S +K+ + + + G GM+ GQ+LDI E I E + I KT Sbjct: 115 FEVLSES---IKNEVDAMCANYIVKKSGCFGMIRGQLLDIDSE-ISEDNIIEIYDKKTCN 170 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237 L+ + S I++ +L + NLG+ FQ+ DDL+D E D+ KK Sbjct: 171 LLKASTVSAGILSKVDDETLLKLENYAFNLGMAFQIIDDLMDYENDIKIEKK 222 >gi|294501072|ref|YP_003564772.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium QM B1551] gi|294351009|gb|ADE71338.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium QM B1551] Length = 321 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 14/222 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77 T+++ L QT +T D +++ GGK+IR V A + N V Sbjct: 15 TLIEKELEQTVHTDETLITD---ASLHLLQAGGKRIRPVFVLLAAKFGHYNIDQIKHVAV 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SL+HDD+ +D+ RRGKPT+ ++D A+ G+ + A E++S K Sbjct: 72 ALELIHMASLVHDDV--IDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEVMSEVK-- 127 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + +LS T G + Q+ D + + K KT L+ +C+ GA Sbjct: 128 ---DVEAHKILSNTMVELTLGEIE-QIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLGA 183 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 I A A ++ +RL FG +G+ FQ+ DD+LD EE L K Sbjct: 184 IAAGAPEDIHKRLFWFGYYVGMSFQITDDILDFISSEEQLGK 225 >gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii] gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii] Length = 261 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 10/205 (4%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 + A+RYA+ GG++ L A+ A+E I + DDLPS+D+ Sbjct: 1 MHEAMRYAVGGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDS 60 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +R GKPTVH + TA+ AG LL FE ++ + + ++++ ++ IG G Sbjct: 61 ELRHGKPTVHRAFGIPTALFAGTALLALGFEHLA---ARYSGDTAARMVAEVSRAIGSTG 117 Query: 159 MLGGQMLD----IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +L GQ +D D ++ + + KT AL+ + +GAI AS+ E E LR +G Sbjct: 118 LLAGQAVDLGIENPDRAVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYG 177 Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236 G+++Q+ DD+ D E+L K Sbjct: 178 RVTGLLYQIVDDVADATKTMEELGK 202 >gi|34557991|ref|NP_907806.1| geranylgeranyl pyrophosphate synthase [Wolinella succinogenes DSM 1740] gi|34483709|emb|CAE10706.1| GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Wolinella succinogenes] Length = 286 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 126/234 (53%), Gaps = 12/234 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-ECASLFNV 67 L+ + + L++ +N+ L +R GGK+ R L+ ++L + Sbjct: 3 LESVMEGFERFLEE-EAPLFEGFHPHYNEYLWEMVR---NGGKRFRPRLLLGVVSALAPL 58 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +A A+E +H YSLIHDDLP+MDN RRG PT+H++YDE +A++AG+ L T+A Sbjct: 59 LVKSAYAPALALEILHTYSLIHDDLPAMDNAATRRGHPTLHVKYDEASAVLAGDALNTHA 118 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 F +++ L + + L+ L G GM+ GQ LD E ++ ++ I KT Sbjct: 119 FYLLAQA--PLGSDTKVALVRELASAGGAGGMVLGQALDCYFEHQKLEIEKLRFIHLHKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 G L+ + + GAI+A S+ E+ RL G LG++FQ+ DD++D EE+ K Sbjct: 177 GRLIAASLKMGAIIAALSKEEQARLEEIGLKLGLLFQVQDDIIDATWSEEEAGK 230 >gi|146281341|ref|YP_001171494.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501] gi|145569546|gb|ABP78652.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501] gi|327479520|gb|AEA82830.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri DSM 4166] Length = 322 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV S + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLSGSALGHQGEQLRLLAAIIEFLHTSTLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L +FE++ D++ ++S + +G + Q+ + Sbjct: 100 NALWGNAPSVLVGDFLYARSFEMMVEL-----DSMPVMRIISQATRVIAEGEVL-QLSKV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A +A AS+ ++E LR FG++LGI FQL DDL Sbjct: 154 RDASTTEEIYMEVIRGKTAMLFEASTHSAATLAGASEQQREALRTFGDHLGIAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD + D Sbjct: 214 LDYQGDAE 221 >gi|295706420|ref|YP_003599495.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium DSM 319] gi|294804079|gb|ADF41145.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium DSM 319] Length = 321 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 14/222 (6%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77 T+++ L QT +T D +++ GGK+IR V A + N V Sbjct: 15 TLIEKELEQTVHTDETLITD---ASLHLLQAGGKRIRPVFVLLAAKFGHYNIDQIKHVAV 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E IH SL+HDD+ +D+ RRGKPT+ ++D A+ G+ + A E++S K Sbjct: 72 ALELIHMASLVHDDV--IDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEVMSEVK-- 127 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 ++ + +LS T G + Q+ D + + K KT L+ +C+ GA Sbjct: 128 ---DVEAHKILSNTMVELTLGEIE-QIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLGA 183 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 I A A ++ +RL FG +G+ FQ+ DD+LD EE L K Sbjct: 184 IAAGAPEDIHKRLFWFGYYVGMSFQITDDILDFISSEEQLGK 225 >gi|300859805|ref|ZP_07105893.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11] gi|300850623|gb|EFK78372.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11] gi|315144365|gb|EFT88381.1| geranyltranstransferase [Enterococcus faecalis TX2141] Length = 293 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTLFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|28897101|ref|NP_796706.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD 2210633] gi|28805310|dbj|BAC58590.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD 2210633] Length = 333 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 53 GGKRLRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 111 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILQLMSNAVNVIAEGEV-QQLMNCN 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A ++ + L+ +G+ LG FQL DD++ Sbjct: 165 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVM 224 Query: 229 DCEED 233 D D Sbjct: 225 DYTSD 229 >gi|258542159|ref|YP_003187592.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256633237|dbj|BAH99212.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01] gi|256636296|dbj|BAI02265.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-03] gi|256639349|dbj|BAI05311.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-07] gi|256642405|dbj|BAI08360.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-22] gi|256645460|dbj|BAI11408.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-26] gi|256648513|dbj|BAI14454.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-32] gi|256651566|dbj|BAI17500.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654557|dbj|BAI20484.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO 3283-12] Length = 356 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%) Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDN 97 A GGK++R L A + N+ + + A +E IH +L+HDD+ +D+ Sbjct: 64 AAHLVAAGGKRLRPLLTLAAARMCGYNNQDGRMRHVEIAACVEFIHTATLLHDDV--VDD 121 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRG + + + +++ G+ L +F+I+++ ++ +LS + Sbjct: 122 SQLRRGLASANAIFGNKASVLVGDFLFARSFQILTA-----DASLGVMAILSAASATLAE 176 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 G + QM D Q + KT AL ACESGA++ A+ ++E LR +G NL Sbjct: 177 GEVM-QMTTQNDLSTSVEQYLQVIYGKTAALFAAACESGAVIGEATPEQREALRMYGANL 235 Query: 218 GIIFQLADDLLDCEED---LPKK 237 G+ FQL DD LD D L K+ Sbjct: 236 GMAFQLVDDALDYAADQATLGKE 258 >gi|322831197|ref|YP_004211224.1| Polyprenyl synthetase [Rahnella sp. Y9602] gi|321166398|gb|ADW72097.1| Polyprenyl synthetase [Rahnella sp. Y9602] Length = 323 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 113/221 (51%), Gaps = 11/221 (4%) Query: 16 IDTILDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA 72 ID DD+ AS ++ +++ L++ + Y ++ GGK+IR + A + Sbjct: 7 IDLTQDDMAAVNASILEQLNSEVSLINQLGYYIISGGGKRIRPMIAVLAAKALSYQGDKH 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 ++V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T AF++++ Sbjct: 67 IKVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMT 124 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192 ++ + +++ N+ +G + Q+++ D I E + KT L A Sbjct: 125 DLES-----LPVLALMAKAVNVIAEGEV-QQLINCNDPDITEASYMQVIYSKTARLFEAA 178 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++ A++A + + L+ +G LG FQL DDLLD + D Sbjct: 179 SQASAMLAGGNNEQITALQDYGRYLGTAFQLIDDLLDYDAD 219 >gi|189345859|ref|YP_001942388.1| Polyprenyl synthetase [Chlorobium limicola DSM 245] gi|189340006|gb|ACD89409.1| Polyprenyl synthetase [Chlorobium limicola DSM 245] Length = 332 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 16/241 (6%) Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58 M L +L +E +R ++D L A + L + RY + G GK+IR FL Sbjct: 1 MTITLTQELVEEKYRRYHKRINDAL---AGCFSADKPETLYAPARYIIEGKGKRIRPFLT 57 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 + + AL A+E +H ++L+HDD+ MD +R G+P VH Q++ AI+ Sbjct: 58 LLASESVCGSSENALNAALAVEILHNFTLMHDDI--MDAADLRHGRPAVHKQWNTNVAIL 115 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDET 175 +G+ ++ YA+E+ KT+ L N + GQ LD++ E + Sbjct: 116 SGDMMIAYAYELALQSKTERHRE------LIHILNHANITICEGQALDMELELKKNATIS 169 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KTG L+ A E+G + + +Q + L FGE +G FQ+ DD LD + Sbjct: 170 DYLDMIAKKTGRLISAALEAGGVAGNGTQEQLNALVTFGEKIGRAFQIQDDFLDIMAEDG 229 Query: 236 K 236 K Sbjct: 230 K 230 >gi|156973119|ref|YP_001444026.1| octaprenyl-diphosphate synthase [Vibrio harveyi ATCC BAA-1116] gi|156524713|gb|ABU69799.1| hypothetical protein VIBHAR_00798 [Vibrio harveyi ATCC BAA-1116] Length = 323 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A +N + L+ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPENVEVALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|103486007|ref|YP_615568.1| trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256] gi|98976084|gb|ABF52235.1| Trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256] Length = 337 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 8/235 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 + G +P L + ++++ MQ++ A GGK++R L Sbjct: 8 LRGTVPPSLDPMMTLVAADMNEVNAVILDRMQSEVPLIPELAGHLIAGGGKRMRPMLTLA 67 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 C L + ++ AA+E IH +L+HDD+ +D +RRG+ T ++ + +++ G Sbjct: 68 CGRLLDYPGRRHCKLAAAVEFIHTATLLHDDV--VDKSDLRRGRKTANVIWGNSASVLVG 125 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + L + AFE++ + ++ +LS + +G + Q+ + E Q I Sbjct: 126 DFLFSRAFEVMVEDGS-----LKVLKILSRASAVIAEGEVN-QLSAQRRIETSEDQYLAI 179 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT L AC+ A++A + + L +G NLGI FQL DD +D D Sbjct: 180 INAKTAELFAAACKIAAVVAERDEATEAALDAYGRNLGIAFQLVDDAIDYVSDAE 234 >gi|222085054|ref|YP_002543583.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter K84] gi|221722502|gb|ACM25658.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter K84] Length = 455 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 117/232 (50%), Gaps = 22/232 (9%) Query: 10 QENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 + + +R++ ++ L + S +Q + + L+S+ GGK++R L A+L+N Sbjct: 142 KADMERVNQLI---LSKAGSDVQMIPEVAEHLISS------GGKRLRPMLTIASAALYNY 192 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +++ ++E +H +L+HDD+ +D +RRGK T + + +++ G+ LL A Sbjct: 193 QGDNHIKLATSVEFLHTATLLHDDV--VDESDLRRGKSTARMIWGNQASVLVGDFLLGQA 250 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F ++ + + + +LS + +G + Q+ ++ E + + KT A Sbjct: 251 FRMMVEVGS-----LEALDVLSSAACVIAEGEVL-QLSVSKNMETTEDDYLSVIRAKTAA 304 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 L A E G I+A+A + E+ L+ +G NLG+ FQL DD LD DL K Sbjct: 305 LFSAAAEVGPIVANAGKAERNALKSYGTNLGLAFQLVDDALDYGGKAADLGK 356 >gi|212696081|ref|ZP_03304209.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM 7454] gi|212676710|gb|EEB36317.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM 7454] Length = 279 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 7/223 (3%) Query: 12 NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN- 68 N K D IL D ++ A + ++ L A+ YA GK+IR + E + + Sbjct: 5 NKKEFDRILNTDKKIIDQAMKEKFVDDNPLNEALIYASDSGKRIRPIVFLETCRMLLGDK 64 Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + ++E +H YSL+HDD+P MDN RRGK TVH ++ E AI+ G+ LL++A Sbjct: 65 LDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAILVGDSLLSFA 124 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTG 186 FE I ++D + L G GM+ GQ+ DI+ ++ + + + + K KT Sbjct: 125 FENI--LNLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSYILDVYKNKTS 182 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L A + + +L + LG+ FQL DD+LD Sbjct: 183 RLFMAALMMAGLYCQLDDEKLTKLENYAYYLGMAFQLQDDILD 225 >gi|170725365|ref|YP_001759391.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908] gi|169810712|gb|ACA85296.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908] Length = 323 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + N L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPLLSILAARAVDYNGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ + + +L+ N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELGS-----MEVLEVLADATNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A + + + L +G+ LG FQL DDLL Sbjct: 155 DPNTTEESYMRVIYCKTAKLFEAATRLAGVLADSPKEIQVALADYGKYLGTAFQLTDDLL 214 Query: 229 DCEEDLP 235 D D Sbjct: 215 DYTADTE 221 >gi|240850066|ref|YP_002971459.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup] gi|240267189|gb|ACS50777.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup] Length = 358 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 57/223 (25%), Positives = 109/223 (48%), Gaps = 15/223 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 Q++ +R++ + + ++ M + ++ L+S+ GGK++R + A +F Sbjct: 45 QKDMERVNQFILSM-AKSEVEMIPEISNHLISS------GGKRLRPMITLASAHMFGYQS 97 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +++ A+E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF+ Sbjct: 98 DGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTARMIWGNQASVLVGDFLLGQAFK 155 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++ + I + +L+ I +G + Q+ ++ + I KT AL Sbjct: 156 MMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSAAKNIKTSPSDYLKIINAKTAALF 209 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A E G I+A E+ LR +G +LG+ FQL DD LD Sbjct: 210 SAAAEVGPIVAGYGHKERSSLREYGTSLGLAFQLIDDALDYSG 252 >gi|15676185|ref|NP_273317.1| geranyltranstransferase [Neisseria meningitidis MC58] gi|7225485|gb|AAF40715.1| geranyltranstransferase [Neisseria meningitidis MC58] Length = 259 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 112/197 (56%), Gaps = 5/197 (2%) Query: 43 IRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101 +RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN +R Sbjct: 1 MRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLR 60 Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 RGKPT HI+Y E TA++ G+ L T AF+++S P T+L + ++ L G +GM G Sbjct: 61 RGKPTCHIKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAG 119 Query: 162 GQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLG 218 GQ +D+ + + + + +KTGAL+ A GA S E L + LG Sbjct: 120 GQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLG 179 Query: 219 IIFQLADDLLDCEEDLP 235 + FQ+ DD+LDCE D Sbjct: 180 LAFQVIDDVLDCEADTA 196 >gi|188532487|ref|YP_001906284.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99] gi|188027529|emb|CAO95376.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99] Length = 324 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 115/227 (50%), Gaps = 13/227 (5%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFN- 66 N ++I+ + + + + Q N L++ + Y ++ GGK+IR + A N Sbjct: 2 NLEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAIND 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T Sbjct: 62 YAGKQHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF++++S + ++ ++S N+ +G + Q+++ D I E + KT Sbjct: 120 AFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QLMNCNDPDITEESYMRVIYSKTA 173 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A +S AI+A A+ ++++ L+ +G +G FQL DDLLD D Sbjct: 174 RLFEAAAQSSAILAGATASQEQALQDYGRYIGTAFQLIDDLLDYSAD 220 >gi|85058340|ref|YP_454042.1| octaprenyl diphosphate synthase [Sodalis glossinidius str. 'morsitans'] gi|84778860|dbj|BAE73637.1| octaprenyl-diphosphate synthase [Sodalis glossinidius str. 'morsitans'] Length = 323 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 18/235 (7%) Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58 MN ++L ++ ++T + + L + + Y + GG K+IR + Sbjct: 1 MNIEQITELTAQDMAEVNTAIREQLNSEVALINQLG--------HYIISGGGKRIRPMIA 52 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 A + + V A IE IH +L+HDD+ +D +RRGK T + + +++ Sbjct: 53 VLAARALHYQGKQHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178 G+ + T AF+++++ ++ +R ++S NI +G + Q+++ D I Sbjct: 111 VGDFIYTRAFQMMTALES-----LRVLELMSEAVNIIAEGEVL-QLMNCNDPDITIDNYM 164 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT L A +S AI+A A ++ LR +G LG FQL DDLLD D Sbjct: 165 RVIYSKTARLFEAASQSSAILAGADACQEAALRDYGRYLGTAFQLIDDLLDYGAD 219 >gi|317495197|ref|ZP_07953567.1| polyprenyl synthetase [Gemella moribillum M424] gi|316914619|gb|EFV36095.1| polyprenyl synthetase [Gemella moribillum M424] Length = 286 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 8/221 (3%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76 IL+D + +T + L +I Y+L+ GKKIR + + V Sbjct: 13 DILNDFAKKYIE--KTDMPELLKKSISYSLVNDGKKIRPLSFLYLLKYYGEDFAEYFDVA 70 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 AIE +H YSL+HDDLP MDN R GK T H + + A++ G+ +LT AFE++S+ + Sbjct: 71 LAIELVHTYSLVHDDLPEMDNDDYRWGKLTNHKVFGQDVAVLTGDAMLTLAFEVLSN--S 128 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACE 194 +K +++ +L+ + G GM+ GQ+ D ++ ++ + + +KTG L+ + Sbjct: 129 NIKPDLKVKLISQFANYSGAMGMIAGQIYDIKQKEYEVNADYLRRMHSLKTGKLIELPLD 188 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +A E + FG+ LGI +Q+ DD+LD D Sbjct: 189 FACQIAG-KVEELSDINSFGKELGIAYQIKDDILDYYGDFE 228 >gi|126726042|ref|ZP_01741884.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium HTCC2150] gi|126705246|gb|EBA04337.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium HTCC2150] Length = 332 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 13/224 (5%) Query: 14 KRIDTILDDLLLQTA----SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 R+ L D + Q + M ++H R+ + + GGK+IR + A + + Sbjct: 12 DRLAKALADEMAQVNDMIRARMASEHAPRIPEVTAHLVEAGGKRIRPMMTLAAAKMCGYD 71 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + A +E IH +L+HDD+ +D RRG+ T ++ +D ++I+ G+ L AF Sbjct: 72 GPYHINLAATVEFIHTATLLHDDV--VDESSQRRGRATANLLWDNKSSILVGDYLFARAF 129 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 +++ ++ + +LS +G + QM QD DE + + KT AL Sbjct: 130 QLMVEAES-----LTVLDILSNASATIAEGEVL-QMTAAQDLETDEATYLKVVRGKTAAL 183 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A E G ++A+A + L FG+ LGI FQ+ DDLLD + Sbjct: 184 FSAATEVGGVIANAPAEHTKALFDFGDALGISFQIVDDLLDYDG 227 >gi|254225991|ref|ZP_04919591.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51] gi|254291338|ref|ZP_04962132.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226] gi|125621447|gb|EAZ49781.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51] gi|150422794|gb|EDN14747.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226] Length = 348 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 68 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 125 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 126 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 179 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 180 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 239 Query: 229 DCEED 233 D D Sbjct: 240 DYTSD 244 >gi|300115547|ref|YP_003762122.1| trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113] gi|299541484|gb|ADJ29801.1| Trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113] Length = 322 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 14/232 (6%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLL--SAIRYAL-LGGKKIRSFLVTECASLFNV 67 + D + DD+ A Q H+D +L Y + GGK++R +V A F+ Sbjct: 2 DIQSAYDLVADDMRSVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFDY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + A IE IH +L+HDD+ +D+ +RRG+ T + + +++ G+ L + A Sbjct: 62 QGSYHIDIAAIIEFIHTATLLHDDV--VDSSELRRGRKTANNIWGSEASVLVGDFLYSRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 FE++ D++R +L+ T N +G + Q+L+ + E I + KT Sbjct: 120 FEMMVG-----VDSMRVMEILARTTNTIAEGEVM-QLLNCHEPDTTEECYLEIIRSKTAK 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 L A + GA++ H S E++ + +G +LG FQL DD+LD EDL K Sbjct: 174 LFEAATQLGAVLCHRSSAEEKLMATYGMHLGTAFQLTDDVLDYSAFSEDLGK 225 >gi|114705301|ref|ZP_01438209.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506] gi|114540086|gb|EAU43206.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506] Length = 315 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 76/228 (33%), Positives = 119/228 (52%), Gaps = 10/228 (4%) Query: 6 PSKLQEN---SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61 P++L+E KRI+ L ++L + ++L AI + L GK++R L Sbjct: 3 PTRLEETTRLQKRIEQRLGEVLPACL-----EGQEQLRDAIATSVLAPGKRLRPLLAVLT 57 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A N + A+ G AIE IH SL+ DDLP MD+ +RRG+P H+ Y E TA++A Sbjct: 58 AIDLNGDVEAAIEGGCAIELIHTASLVLDDLPCMDDATLRRGQPPTHVAYGEDTALLAVI 117 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 +++ AFE++++ + L R++ + +L +G G++ GQ D++ Sbjct: 118 AMISRAFELLAAAPS-LNPEQRTRSVAALGKAVGTSGLVAGQFADLKGGSGSTDAAARTN 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KTGAL A E G I + A + + L F LG+ FQL DDLLD Sbjct: 177 ALKTGALFLAAVEIGMIGSGAPRETRRELEAFARELGLAFQLLDDLLD 224 >gi|261342632|ref|ZP_05970490.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC 35316] gi|288315280|gb|EFC54218.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC 35316] Length = 323 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 101/201 (50%), Gaps = 10/201 (4%) Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92 + +L++ + Y ++ GGK+IR + A + + A IE IH +L+HDD+ Sbjct: 27 SDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 86 Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152 +D +RRGK T + + +++ G+ + T AF++++S + ++ ++S Sbjct: 87 --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139 Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212 N+ +G + Q++++ D I E + KT L A + I+ + +++ L+ Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEESYMRVIYSKTARLFEAAAQCSGILGGCTDVQEKGLQD 198 Query: 213 FGENLGIIFQLADDLLDCEED 233 +G LG FQL DDLLD D Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219 >gi|309805530|ref|ZP_07699575.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c] gi|308165181|gb|EFO67419.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c] Length = 288 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 22/236 (9%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69 +I++ L + L T ++ + + Y+ L GGK++R L + + Sbjct: 10 YLPQINSFLKEQLECTI------NDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +++ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + Sbjct: 64 EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184 I+ +L+ +T IG GM GGQ +DI +ET + ++ +K Sbjct: 124 WIAEASNS------YELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLK 177 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237 TG L+ + + A A++S + L F E G +Q+ DD++D + KK Sbjct: 178 TGCLIVASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233 >gi|149909332|ref|ZP_01897988.1| geranyltranstransferase [Moritella sp. PE36] gi|149807649|gb|EDM67597.1| geranyltranstransferase [Moritella sp. PE36] Length = 296 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 88/233 (37%), Positives = 128/233 (54%), Gaps = 6/233 (2%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 +L + R ++D L Q + + T H+ +L +A+ Y LL GGK+IR +V + Sbjct: 2 QLSNSITRYQGRINDYLQQQINLLPT-HDTQLAAAMEYGLLQGGKRIRPVIVYAVGEMLG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 VN AAIE IH YSLIHDDLP+MD+ +RRG+PT HI++D TAI+AG+ L + Sbjct: 61 VNLRDLDGPAAAIESIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDHATAILAGDALQPF 120 Query: 127 AFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM 183 AFE++ + R ++ SLT G GM GGQ +D+ D+ I TQ+ I Sbjct: 121 AFEMLLDCALAPEAEKNRFAMLKSLTQASGYSGMCGGQAMDLAATDKQISLTQLEAIHNN 180 Query: 184 KTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL+ A + G + + H S L + +G+ FQ+ DD+LD D Sbjct: 181 KTGALINCAAKLGCLASPHCSIELLAALDKWSNAIGLAFQVQDDILDIISDTE 233 >gi|15640461|ref|NP_230088.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590773|ref|ZP_01678102.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80] gi|121727265|ref|ZP_01680424.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52] gi|147674613|ref|YP_001218702.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395] gi|153819559|ref|ZP_01972226.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457] gi|153822596|ref|ZP_01975263.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33] gi|153830825|ref|ZP_01983492.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39] gi|227080645|ref|YP_002809196.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2] gi|254850665|ref|ZP_05240015.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10] gi|298501034|ref|ZP_07010835.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757] gi|9654858|gb|AAF93607.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547375|gb|EAX57489.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80] gi|121630384|gb|EAX62779.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52] gi|126509895|gb|EAZ72489.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457] gi|126519900|gb|EAZ77123.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33] gi|146316496|gb|ABQ21035.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395] gi|148873684|gb|EDL71819.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39] gi|227008533|gb|ACP04745.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2] gi|227012288|gb|ACP08498.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395] gi|254846370|gb|EET24784.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10] gi|297540282|gb|EFH76342.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757] Length = 348 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 68 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 125 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 126 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 179 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 180 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 239 Query: 229 DCEED 233 D D Sbjct: 240 DYTSD 244 >gi|299065629|emb|CBJ36801.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CMR15] Length = 322 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + E+ +D ++ L + + Q + ++SA GGK++R ++ A+ Sbjct: 6 LLAPVAEDMHAVDAVIRRRLGSEVA-LINQIGEYIISA------GGKRLRPVILLLMANA 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 59 LGYRGQHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTANAAFGNAASVLVGDFLY 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + AF+++ D++R +L+ N+ +G + Q+L++ D + E + + + K Sbjct: 117 SRAFQMMVQA-----DSMRVMQILADATNVISEGEVL-QLLNMHDPDVTEERYLQVIRYK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T L A + GA+++ A + +G +G FQ+ DDLLD Sbjct: 171 TAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 218 >gi|229525127|ref|ZP_04414532.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|229338708|gb|EEO03725.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae bv. albensis VL426] gi|327483290|gb|AEA77697.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4] Length = 323 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|323704336|ref|ZP_08115915.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536402|gb|EGB26174.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 319 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 15/226 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 ++E+ K+ID + + + ++ +D + L GGK+IR LV A + Sbjct: 6 EFVKEDMKKIDEFILANVKTNSPTIKKAIDDLV-------LSGGKRIRPLLVIAIARMGE 58 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + + A+IE +H +LIHDD+ +D+ +RRG+ +V +Y + TA+ G+ L + Sbjct: 59 YSEEKIIPIAASIEIMHMATLIHDDI--IDDSKMRRGQKSVQSKYGKETAVFTGDFLFSQ 116 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF +I+ ++ + ++ + ++ Q + + + + KT Sbjct: 117 AFNLIADIISKENLKLIAKGVKAICEGEI------EQFDNRYNLDLSIKKYLKRIYRKTA 170 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L +CESGA A + +R FG +G FQ+ DD+LD E Sbjct: 171 LLFAISCESGASQAGLPKEMIRAMRHFGLEIGTAFQIVDDILDYEG 216 >gi|51473666|ref|YP_067423.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington] gi|51459978|gb|AAU03941.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington] Length = 327 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 118/226 (52%), Gaps = 16/226 (7%) Query: 8 KLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 K+Q++ K T L+DL+ L++ + + + LL A GGK+IR L A + Sbjct: 6 KIQQDLKEEVTQLNDLIISCLKSDTELIEKVGKYLLEA------GGKRIRPLLTIITAKM 59 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F+ +++ +A+E IH +L+HDD+ +D+ +RR KPTV++ + T+I+ G+ L Sbjct: 60 FDYKGDNHIKLASAVEFIHAATLLHDDV--VDDSTLRRFKPTVNVIWGSKTSILVGDFLF 117 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + +F+++ + I++ +L+ I +G + + + I + I K K Sbjct: 118 SQSFKLMIASGC-----IKAMNVLARASVIISEGEVVQLVKLNERRIITIDEYQQIVKSK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 T L ACE GAI+A E ++ FG LG IFQ+ DDLLD Sbjct: 173 TAELFGAACEVGAIIAEQVDRVSEDVQDFGMLLGTIFQVIDDLLDY 218 >gi|126445573|ref|YP_001062715.1| polyprenyl synthetase [Burkholderia pseudomallei 668] gi|126225064|gb|ABN88569.1| geranyltranstransferase [Burkholderia pseudomallei 668] Length = 322 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 121/230 (52%), Gaps = 14/230 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68 + ++ + LD +L + L +A+RYA+ GG K++R L L + + Sbjct: 34 KTAIRQTEATLDRILPCADGRLTA-----LHAAMRYAVFGGGKRLRPLLCHAAGELVDAS 88 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 +V A IE IH +SLI DDLP+MDN +R G+ T+H QYD TA++A +GL++ AF Sbjct: 89 REALAQVSAVIEMIHVFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAF 148 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTG 186 +S L ++R LM L +IG G+ GGQ +D+ +D T++ + +MKTG Sbjct: 149 LALSEAPLPL--DVRVALMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMHRMKTG 206 Query: 187 ALMCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLADDLLDCEE 232 AL+ A G + E + +GE LG+ +Q+ DD+LD Sbjct: 207 ALIRAAVRMGVLCGTVPGVELGAAWRAVSEYGERLGLAYQVVDDILDSTA 256 >gi|22124585|ref|NP_668008.1| octaprenyl diphosphate synthase [Yersinia pestis KIM 10] gi|45440424|ref|NP_991963.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Microtus str. 91001] gi|108806061|ref|YP_649977.1| octaprenyl diphosphate synthase [Yersinia pestis Antiqua] gi|108813417|ref|YP_649184.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516] gi|145600809|ref|YP_001164885.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides F] gi|153997290|ref|ZP_02022390.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125] gi|162421069|ref|YP_001608269.1| octaprenyl diphosphate synthase [Yersinia pestis Angola] gi|165928166|ref|ZP_02223998.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165937469|ref|ZP_02226032.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. IP275] gi|166011293|ref|ZP_02232191.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166214028|ref|ZP_02240063.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401227|ref|ZP_02306727.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420704|ref|ZP_02312457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423704|ref|ZP_02315457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470490|ref|ZP_02335194.1| octaprenyl-diphosphate synthase [Yersinia pestis FV-1] gi|218930527|ref|YP_002348402.1| octaprenyl diphosphate synthase [Yersinia pestis CO92] gi|229839166|ref|ZP_04459325.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896655|ref|ZP_04511822.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A] gi|229899730|ref|ZP_04514871.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229903892|ref|ZP_04519005.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516] gi|270489119|ref|ZP_06206193.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294505357|ref|YP_003569419.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003] gi|21957387|gb|AAM84259.1|AE013669_9 octaprenyl diphosphate synthase [Yersinia pestis KIM 10] gi|45435281|gb|AAS60840.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Microtus str. 91001] gi|108777065|gb|ABG19584.1| octaprenyl-diphosphate synthase [Yersinia pestis Nepal516] gi|108777974|gb|ABG12032.1| octaprenyl-diphosphate synthase [Yersinia pestis Antiqua] gi|115349138|emb|CAL22101.1| octaprenyl-diphosphate synthase [Yersinia pestis CO92] gi|145212505|gb|ABP41912.1| octaprenyl-diphosphate synthase [Yersinia pestis Pestoides F] gi|149288927|gb|EDM39007.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125] gi|162353884|gb|ABX87832.1| octaprenyl-diphosphate synthase [Yersinia pestis Angola] gi|165914574|gb|EDR33188.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. IP275] gi|165919853|gb|EDR37154.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989677|gb|EDR41978.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166204823|gb|EDR49303.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|166961510|gb|EDR57531.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049252|gb|EDR60660.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057874|gb|EDR67620.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679662|gb|EEO75765.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516] gi|229687222|gb|EEO79297.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229695532|gb|EEO85579.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700433|gb|EEO88465.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A] gi|262363422|gb|ACY60143.1| octaprenyl-diphosphate synthase [Yersinia pestis D106004] gi|262367203|gb|ACY63760.1| octaprenyl-diphosphate synthase [Yersinia pestis D182038] gi|270337623|gb|EFA48400.1| polyprenyl synthetase [Yersinia pestis KIM D27] gi|294355816|gb|ADE66157.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003] gi|320013717|gb|ADV97288.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 323 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMISVLVARALNYQGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ ++ +R ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLQS-----MRVLTLMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S AI++ AS+ ++ L+ +G LG FQL DDLL Sbjct: 155 NPDITEESYMQVIYSKTARLFEAAAQSAAILSDASEEQELALQNYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D + Sbjct: 215 DYSAE 219 >gi|187930136|ref|YP_001900623.1| Polyprenyl synthetase [Ralstonia pickettii 12J] gi|187727026|gb|ACD28191.1| Polyprenyl synthetase [Ralstonia pickettii 12J] Length = 325 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 110/228 (48%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + E+ + +D ++ L + Q + ++SA GGK++R ++ A+ Sbjct: 9 LLAPVAEDMRAVDAVIRRRLGSEVV-LINQIGEYIVSA------GGKRLRPVILLLVANA 61 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 62 LGYKGEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTANAVFGNAASVLVGDFLY 119 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + AF+++ + +R +L+ NI +G + Q+L++ D + E + + + K Sbjct: 120 SRAFQMMVQANS-----MRIMQILADATNIISEGEVL-QLLNMHDPDVTEERYLQVIRYK 173 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T L A + GA+++ A +E +G +G FQ+ DDLLD Sbjct: 174 TAKLFEAAAQIGAVLSDADAATEEAAAEYGRRIGTAFQIVDDLLDYTS 221 >gi|260878015|ref|ZP_05890370.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034] gi|260896382|ref|ZP_05904878.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466] gi|308085175|gb|EFO34870.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466] gi|308090006|gb|EFO39701.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034] gi|328471899|gb|EGF42776.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 10329] Length = 323 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILQLMSNAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A ++ + L+ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|254419553|ref|ZP_05033277.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3] gi|196185730|gb|EDX80706.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3] Length = 301 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 94/230 (40%), Positives = 133/230 (57%), Gaps = 6/230 (2%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62 + ++ E + + LD LL + RL A+RYA LG GK++R F E A Sbjct: 10 AVIDRVAEVADLVTVALDQLLPRADGP-----EARLTEAMRYAALGPGKRLRPFFALEAA 64 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LFN++ + LR A+EC+H YSL+HDDLP MD+ +RRG+PTVH YDE TA++AG+ Sbjct: 65 RLFNIDERSVLRAACALECVHAYSLVHDDLPCMDDDDMRRGRPTVHRAYDEATAVLAGDA 124 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L T AF+II T +R +L L+ G +GM GGQM+D+ D V +Q+ Sbjct: 125 LQTAAFDIILHEDTHEDAVVRCELAARLSMASGARGMAGGQMIDLLGVRDDLGGVARMQR 184 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTGAL +A E I+A AS + L F ++G+ +Q+ DDLLD E Sbjct: 185 LKTGALFAYAFEIPLIIAEASAQHQHALISFAHDVGLAYQIVDDLLDAEG 234 >gi|229507073|ref|ZP_04396579.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|229508772|ref|ZP_04398264.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229519759|ref|ZP_04409202.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229519996|ref|ZP_04409425.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] gi|229530278|ref|ZP_04419666.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] gi|229606271|ref|YP_002876919.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|255743817|ref|ZP_05417774.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262167602|ref|ZP_06035306.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] gi|229332051|gb|EEN97539.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae 12129(1)] gi|229342945|gb|EEO07934.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80] gi|229344448|gb|EEO09423.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC9] gi|229354175|gb|EEO19106.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae B33] gi|229355818|gb|EEO20738.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae BX 330286] gi|229368926|gb|ACQ59349.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae MJ-1236] gi|255738566|gb|EET93954.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholera CIRS 101] gi|262023938|gb|EEY42635.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio cholerae RC27] Length = 323 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|259501558|ref|ZP_05744460.1| geranyltranstransferase [Lactobacillus iners DSM 13335] gi|302191468|ref|ZP_07267722.1| geranyltranstransferase [Lactobacillus iners AB-1] gi|309804209|ref|ZP_07698286.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d] gi|309806895|ref|ZP_07700881.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b] gi|309808828|ref|ZP_07702713.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a] gi|312874432|ref|ZP_07734462.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d] gi|325911777|ref|ZP_08174181.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D] gi|329919888|ref|ZP_08276826.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G] gi|259167076|gb|EEW51571.1| geranyltranstransferase [Lactobacillus iners DSM 13335] gi|308163612|gb|EFO65882.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d] gi|308166713|gb|EFO68906.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b] gi|308167954|gb|EFO70087.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a] gi|311090044|gb|EFQ48458.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d] gi|325476283|gb|EGC79445.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D] gi|328936978|gb|EGG33408.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G] Length = 288 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 22/236 (9%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69 +I++ L + L T ++ + + Y+ L GGK++R L + + Sbjct: 10 YLPQINSFLKEQLECTI------NDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +++ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + Sbjct: 64 EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184 I+ +L+ +T IG GM GGQ +DI +ET + ++ +K Sbjct: 124 WIAEASNS------YELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLK 177 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237 TG L+ + + A A++S + L F E G +Q+ DD++D + KK Sbjct: 178 TGCLIVASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233 >gi|288926232|ref|ZP_06420158.1| polyprenyl synthetase [Prevotella buccae D17] gi|288337011|gb|EFC75371.1| polyprenyl synthetase [Prevotella buccae D17] Length = 323 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 69/228 (30%), Positives = 117/228 (51%), Gaps = 20/228 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 E + I+ LD L + L + I+Y L +GGK+IR L+ +LF + Sbjct: 5 DELLQLINRYLDSL-------PYDRKPASLYAPIKYVLSMGGKRIRPTLMLLAYNLFKDD 57 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L A+E H Y+L+HDDL MDN +RRG+PTVH +++ A+++G+ +L A+ Sbjct: 58 PEKILSSACALETYHNYTLLHDDL--MDNADVRRGQPTVHKKWNANLAVLSGDSMLVLAY 115 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKT 185 + ++ + L + +R + GQ +D++ E + E + + ++KT Sbjct: 116 QRMTECDSHLAEVLRL-------FTETALEIGEGQQMDMEFETRNDVREEEYIEMIRLKT 168 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ A + GA++A A ++ + L FGE +G+ FQL DD LD D Sbjct: 169 SVLLACAMKIGALLADAPADDADNLYRFGEKIGLAFQLQDDYLDVYGD 216 >gi|126741029|ref|ZP_01756712.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6] gi|126717955|gb|EBA14674.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6] Length = 293 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 92/237 (38%), Positives = 132/237 (55%), Gaps = 19/237 (8%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 G S L+ + I L++ L D L A+RYAL GGK +R FLV E A Sbjct: 10 GFASALKASQSMISAHLENRLA---------GEDNLHQAMRYALKGGKMLRGFLVLESAR 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L V+ AL AIEC+H YSL HDDLP MD+ +RRG+PT+H ++DE A++AG+ L Sbjct: 61 LHGVSQKVALDAALAIECLHAYSLAHDDLPCMDDDDLRRGQPTLHRKWDEAMAVLAGDSL 120 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFM 179 +AFE++S+P + + + G GM+ GQMLDI E + Q+ + Sbjct: 121 QCFAFELLSNPDMGPNALSLIRDL---AKSAGKDGMVSGQMLDIAAETAETPLTLEQISL 177 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +Q KTG L+ ++ +GA++A A LR + LG+ FQ+ADD+LD E D+ K Sbjct: 178 LQARKTGCLIEWSASAGAVLAGADST---PLRQYATALGLAFQIADDILDVEGDVQK 231 >gi|297580574|ref|ZP_06942500.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385] gi|297534990|gb|EFH73825.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385] Length = 348 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 68 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 125 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 126 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 179 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 180 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 239 Query: 229 DCEED 233 D D Sbjct: 240 DYTSD 244 >gi|157368719|ref|YP_001476708.1| octaprenyl diphosphate synthase [Serratia proteamaculans 568] gi|157320483|gb|ABV39580.1| Polyprenyl synthetase [Serratia proteamaculans 568] Length = 323 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLAARALHYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S ++ +R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A +S AI++ AS E++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSAILSDASVAEEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|109900040|ref|YP_663295.1| trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c] gi|109702321|gb|ABG42241.1| Trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c] Length = 323 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A N+ + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLTVLAARALNIQTEQHHTLAAIIEFIHTATLLHDDV--VDESTMRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ + D++R +LS N+ +G + Q+++ Sbjct: 101 EVFGNQASVLVGDFLYTRSFQMMVTL-----DSMRVMQILSDATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ S+ + ++ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMEVIYSKTARLFEAATLLAGVLTKQSEAIENAMQDYGKYLGTAFQLVDDIM 214 Query: 229 DCEEDLP 235 D D Sbjct: 215 DYASDSE 221 >gi|138895788|ref|YP_001126241.1| heptaprenyl diphosphate synthase subunit II [Geobacillus thermodenitrificans NG80-2] gi|196248670|ref|ZP_03147370.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. G11MC16] gi|134267301|gb|ABO67496.1| Component II of heptaprenyl diphosphate synthase [Geobacillus thermodenitrificans NG80-2] gi|196211546|gb|EDY06305.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. G11MC16] Length = 320 Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 8/225 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 KL+ + L + + +Q+++ +A+ GGK+IR V A + Sbjct: 2 KLKAMYSFLSKDLAAVEQELERTVQSEYGPLGEAALHLLQAGGKRIRPVFVLLAARFGHY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + V A+E IH SL+HDD+ +D+ +RRG+PT+ ++ A+ G+ L + Sbjct: 62 DLERIKHVAVALELIHMASLVHDDV--IDDADLRRGRPTIKAKWSNRFAMYTGDYLFARS 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E ++ D+ R+ +L+ T +G + Q+ D + KT Sbjct: 120 LERMAEL-----DDPRAHQVLAKTIVEVCRGEIE-QIKDKYWFEQPLRTYLRRIRRKTAL 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ +C+ GA+ A A ++ +RL FG +G+ FQ+ DD+LD Sbjct: 174 LIAASCQLGALAAGAPESVAKRLYWFGHYVGMSFQITDDILDFTG 218 >gi|83942134|ref|ZP_00954596.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36] gi|83847954|gb|EAP85829.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36] Length = 312 Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 89/218 (40%), Positives = 130/218 (59%), Gaps = 9/218 (4%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 DL + H + + A+RYA+ GGK +R+FLV E A L V A AIE Sbjct: 37 DLAIGQILHGLDGLDGTVAEAMRYAVTGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEA 96 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H YSL+HDD+P MD+ +RRG+PTVH+++DE TA++AG+ L T AFE++++ T D Sbjct: 97 LHAYSLVHDDMPCMDDDALRRGQPTVHVKWDEATAVLAGDALQTLAFELVAA--TGCGDA 154 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGA 197 R L+ L G++GM+GGQ +DI E + Q+ +Q KTGAL+ +A +G Sbjct: 155 ERVALVTGLARAAGVRGMVGGQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGP 214 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MA ++ LR + NLG+ FQ+ADD+LD E D Sbjct: 215 VMAG---DDAAALRSYARNLGLAFQIADDILDVEGDAA 249 >gi|217033990|ref|ZP_03439413.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10] gi|216943623|gb|EEC23071.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10] Length = 303 Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 123/227 (54%), Gaps = 11/227 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASLFNVNHLT---- 71 + L H+++ H + L GGK+ R FL CA + ++ Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALMGKKDYSNQQTE 73 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 ++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++ Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189 S+ + L+ +I +L+ L+ N G++GM+ GQ LD E ++ Q+ + + KT L+ Sbjct: 134 SN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191 Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + G + + + + L+ FG +G+ FQ+ DD++D +D Sbjct: 192 SASLMMGLVASGIKDEGLFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238 >gi|153874225|ref|ZP_02002523.1| Polyprenyl synthetase [Beggiatoa sp. PS] gi|152069311|gb|EDN67477.1| Polyprenyl synthetase [Beggiatoa sp. PS] Length = 337 Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 19/230 (8%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIR-------YAL-LGGKKIRSFLVTECASLFNVNH 69 ++ L+ Q + RL S + Y + GGK++R L+ A F Sbjct: 5 AAINTLINQDMRAVNVLIQKRLYSEVALVNQIGDYIVNSGGKRLRPMLLLLSARAFAYQG 64 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF+ Sbjct: 65 THHIDLAAIVEFIHTATLLHDDV--VDASLLRRGQETANNIWGNEASVLVGDFLYSRAFQ 122 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++ +N+R +LS N+ +G + Q+L+ + E + KT L Sbjct: 123 MMVDI-----NNMRVMKILSEATNVMAEGEVL-QLLNCYEPDTTEMDYLRVICAKTAKLF 176 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A + GA+++ ++ + +G +LGI FQL DD LD E+L K Sbjct: 177 EAAAQLGAVISEQPSEYEKAMAMYGMHLGIAFQLIDDALDYNATMENLGK 226 >gi|312871899|ref|ZP_07731983.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a] gi|312872399|ref|ZP_07732468.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1] gi|311091981|gb|EFQ50356.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1] gi|311092621|gb|EFQ50981.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a] Length = 288 Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 22/236 (9%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69 +I++ L + L T ++ + + Y+ L GGK++R L + + Sbjct: 10 YLPQINSFLKEQLECTI------NDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +++ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + Sbjct: 64 EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184 I+ +L+ +T IG GM GGQ +DI +ET + ++ +K Sbjct: 124 WIAEASNS------YELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLK 177 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237 TG L+ + + A A++S + L F E G +Q+ DD++D + KK Sbjct: 178 TGCLIVASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233 >gi|52080783|ref|YP_079574.1| heptaprenyl diphosphate synthase component II [Bacillus licheniformis ATCC 14580] gi|52786153|ref|YP_091982.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus licheniformis ATCC 14580] gi|319645260|ref|ZP_07999493.1| HepT protein [Bacillus sp. BT1B_CT2] gi|52003994|gb|AAU23936.1| heptaprenyl diphosphate synthase component II [Bacillus licheniformis ATCC 14580] gi|52348655|gb|AAU41289.1| HepT [Bacillus licheniformis ATCC 14580] gi|317393069|gb|EFV73863.1| HepT protein [Bacillus sp. BT1B_CT2] Length = 320 Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 14/222 (6%) Query: 21 DDLLLQTASHMQTQHND--RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 DD+ L +T H+D L A + L GGK+IR V + V Sbjct: 12 DDIELIEKELEKTVHSDYPLLSEASLHLLQAGGKRIRPVFVLLSGMFGEYDISKIKNVAV 71 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 ++E IH SL+HDD+ +D+ +RRG+PT+ ++D A+ G+ L + E ++ Sbjct: 72 SLELIHMASLVHDDV--IDDAELRRGQPTIKAKWDNRIAMYTGDYLFARSLEAMTKI--- 126 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 + ++ +LS G + Q+ D + + + KT L+ +C+ GA Sbjct: 127 --NEPKAHEILSKAIVEVCLGEIE-QIKDKYNMEQNLRTYLRRIRRKTALLIASSCQLGA 183 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 I A A +N + L FG +G+ +Q+ DD+LD +L K Sbjct: 184 IAAGAGENIHKTLYWFGYYVGMSYQIIDDILDFTSSEKELGK 225 >gi|269964673|ref|ZP_06178911.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B] gi|269830572|gb|EEZ84793.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B] Length = 323 Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSNAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A ++ + ++ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|260773626|ref|ZP_05882542.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio metschnikovii CIP 69.14] gi|260612765|gb|EEX37968.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio metschnikovii CIP 69.14] Length = 323 Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 9/189 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSAKALGYQGEGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S + NI +G + Q+++ Sbjct: 101 ATFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSHSVNIIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GA++ AS + ++ +G+ LG FQL DD++ Sbjct: 155 DPETTEESYMQVIYSKTARLFEAATQIGAMLCDASPEVERAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEEDLPKK 237 D D K+ Sbjct: 215 DYTAD-GKE 222 >gi|291615993|ref|YP_003518735.1| IspB [Pantoea ananatis LMG 20103] gi|291151023|gb|ADD75607.1| IspB [Pantoea ananatis LMG 20103] gi|327396245|dbj|BAK13667.1| octaprenyl-diphosphate synthase IspB [Pantoea ananatis AJ13355] Length = 323 Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLSARAMGYQGDLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + +R ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSMGS-----LRILALMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A ++ AI+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|322378507|ref|ZP_08052957.1| geranyltranstransferase [Helicobacter suis HS1] gi|321149068|gb|EFX43518.1| geranyltranstransferase [Helicobacter suis HS1] Length = 296 Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 75/226 (33%), Positives = 115/226 (50%), Gaps = 14/226 (6%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALRVGAAI 79 L +++ H + L GGK+ R L+ S F +H A + A+ Sbjct: 19 YLKHAKPKLKSFHPTFEQAFWEMLLNGGKRFRPKLLLAVLSSFMRSHLMIKNAFPIALAL 78 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H YSLIHDDLP MDN +RR PT+H+ Y A + G+GL TYAFE++SS + L Sbjct: 79 EVLHTYSLIHDDLPCMDNAPLRRYHPTLHVSYGVTVATLVGDGLNTYAFELLSSAR--LP 136 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGA 197 + ++ L+ +L H G+ GM+ GQ +D E Q+ ++ +KT L+ + + GA Sbjct: 137 NALKVSLISTLAHCGGVFGMVLGQAIDCYFEHKPLLREQLEILHTLKTAKLIAASLKMGA 196 Query: 198 IMAHA----SQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++A N L FG LG+ FQ+ DD++D E+ K Sbjct: 197 LIAKKYARTPTNLPTTLFNFGLKLGLFFQVRDDIIDRTKSPEESGK 242 >gi|325680723|ref|ZP_08160261.1| polyprenyl synthetase [Ruminococcus albus 8] gi|324107503|gb|EGC01781.1| polyprenyl synthetase [Ruminococcus albus 8] Length = 297 Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 77/245 (31%), Positives = 124/245 (50%), Gaps = 15/245 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M ++ + ++D L + + + +L A+ Y+L GGK++R L+ Sbjct: 1 MTENNKLLMKAYADKVDEQLLKF-----TENKPELQGVVLEAMEYSLTAGGKRLRPMLML 55 Query: 60 ECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 E + + L++ ++E IH YSLIHDDLP MD+ RRGKP+ H + E A++ Sbjct: 56 EFYRMCGGEDLDKMLKLACSVELIHTYSLIHDDLPCMDDDDYRRGKPSCHKAFPENIALL 115 Query: 119 AGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDE 174 AG+ L T AFE+IS + + + L+ L+ IG GM+GGQ++D ++E I Sbjct: 116 AGDALNTLAFEVISECAMEGTISADKAVMLISVLSKAIGTDGMIGGQVIDLQTENEEISI 175 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232 + +Q KTGAL+ AC G I A + + + +G FQ+ DD+LD Sbjct: 176 ETLNTLQSCKTGALIEAACVMGVIAAG-RLDLIPAAADYAQAMGRAFQIVDDILDVTGTF 234 Query: 233 -DLPK 236 +L K Sbjct: 235 EELGK 239 >gi|294625513|ref|ZP_06704141.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600182|gb|EFF44291.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 291 Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 9/233 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59 M+ L + ++R L+ T RL +A+R+A+LGG K++R LV Sbjct: 1 MSSALFDRWIARTER--------SLEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVY 52 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 +LF A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+A Sbjct: 53 ASGALFGAAEDQLDTPAMAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILA 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L T AFE++++ + + L+ +D + + Sbjct: 113 GDALQTRAFELLATAPASAELRVGWMQSLANAAGAAGMCGGQALDIDATGQLQSLQHLQR 172 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + +KTGAL+ A GA+ A+ +++RL F + LG+ FQ+ DD+LD E Sbjct: 173 MHALKTGALIRAAVRMGALTGGAAAADQQRLDEFADALGLAFQVRDDILDVES 225 >gi|326423749|ref|NP_759657.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] gi|319999111|gb|AAO09184.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6] Length = 333 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 53 GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 110 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S NI +G + Q+++ Sbjct: 111 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNIIAEGEVL-QLMNCN 164 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A + L+ +G+ LG FQL DD++ Sbjct: 165 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 224 Query: 229 DCEED 233 D D Sbjct: 225 DYTSD 229 >gi|119502847|ref|ZP_01624932.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080] gi|119461193|gb|EAW42283.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080] Length = 280 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 122/201 (60%), Gaps = 5/201 (2%) Query: 36 NDRLLSAIRYALLG-GKKIRSFLVTECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + RL +A++Y L GKK+R+ LV L A AIE +H YSL+HDDLP Sbjct: 15 DPRLAAALQYVLENSGKKLRARLVMASYHMLCEGADDAAASAATAIEWLHTYSLVHDDLP 74 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153 +MD+ +RRGKPTVH YDE TAI+ G+GL AF +IS + +L R +L+ + + Sbjct: 75 AMDDDALRRGKPTVHTVYDEATAILIGDGLQAAAFSLISEDE-RLASGTRLKLITLIANA 133 Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211 +G GM+GGQ LD+ Q + Q+ +I + KTGAL A SGA+ A+A++ + +RL Sbjct: 134 VGFNGMVGGQALDMAAQGKASTFEQLRLIHEQKTGALFRAAVLSGAVCANATEQDIQRLD 193 Query: 212 CFGENLGIIFQLADDLLDCEE 232 F +G+ FQ+ADD+LD E Sbjct: 194 QFASTIGLAFQVADDILDVTE 214 >gi|32265833|ref|NP_859865.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449] gi|32261882|gb|AAP76931.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449] Length = 288 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 122/224 (54%), Gaps = 14/224 (6%) Query: 16 IDTILDDL---LLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASLFNVN- 68 I IL+D L+ A + + H + ++ GGK+ R LV + Sbjct: 3 ISQILNDFESFLISQAPQIPSFHPHYEQAVWEMMK---NGGKRFRPALVFCVVNALAPQL 59 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 A +IECIH YSLIHDDLP MDN +RRG T+H +YDE A++ G+GL TYAF Sbjct: 60 IKNAFLPALSIECIHTYSLIHDDLPCMDNAPLRRGHATLHTKYDETLALLVGDGLNTYAF 119 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTG 186 ++S + L +R +L+ SL N G+ GM+ GQMLD +D+ + ++ +I KT Sbjct: 120 ALLSQAR--LDAQVRLELIHSLALNAGIGGMVLGQMLDCAFEDKKLSLQELQIIHTNKTA 177 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 L+ + + GAI+++A + + FG LGI FQL DDL+D Sbjct: 178 KLIATSLQFGAIISNAKAHFASSIYEFGLKLGIYFQLRDDLIDA 221 >gi|332977217|gb|EGK14013.1| heptaprenyl diphosphate synthase [Desmospora sp. 8437] Length = 323 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 8/227 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 KL + + L ++ + ++T H D SA GGK++R V Sbjct: 2 KLADIYNSLKQDLREVERELEKSIRTDHRDLNRSAAHLLEAGGKRMRPVFVLLSGKFGEY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + +V +E IH +L+HDD+ +D+ RRG+PTV ++D A+ G+ +L + Sbjct: 62 DVDKLKQVAVPLELIHMATLVHDDV--IDDASTRRGRPTVKAKWDNRVAMYTGDYILGRS 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 I+S ++ + +LS +G + Q+ D + K KT Sbjct: 120 LAIVSQI-----EDPKIHRVLSPAIYQMCRGEIE-QIRDFFATDPSLIRYLHRIKRKTAL 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 LM +CE GA+++ A+ E RLR FG +G+ FQ+ DD+LD D Sbjct: 174 LMSVSCELGALVSGAAPAEVRRLRLFGYFVGMAFQITDDILDLTGDE 220 >gi|258627044|ref|ZP_05721842.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603] gi|258580718|gb|EEW05669.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603] Length = 348 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 68 GGKRLRPLLAVLSAKALGYHGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 125 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 126 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 179 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 180 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 239 Query: 229 DCEED 233 D D Sbjct: 240 DYTSD 244 >gi|119356223|ref|YP_910867.1| polyprenyl synthetase [Chlorobium phaeobacteroides DSM 266] gi|119353572|gb|ABL64443.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Chlorobium phaeobacteroides DSM 266] Length = 332 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 72/241 (29%), Positives = 117/241 (48%), Gaps = 16/241 (6%) Query: 1 MNGGLPSKLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58 MN + +L E R+ ++++ L AS + L + +Y L G GK+IR FL Sbjct: 1 MNMSITQELVEKKYRLYHNLINEAL---ASCFSAEAPVTLYAPAKYILDGKGKRIRPFLT 57 Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118 + + AL+V A+E +H ++L+HDD+ MD +R G+PTVH Q++ AI+ Sbjct: 58 LLASEAVCGSSEHALKVALAVEILHNFTLMHDDI--MDQAELRHGRPTVHKQWNANVAIL 115 Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDET 175 +G+ ++ YA+E+ + Q+ L N + GQ LDI+ E Sbjct: 116 SGDMMIAYAYELALQSPSSR------QIELVHILNDANITICEGQALDIELEEKKHATIA 169 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + K+G L+ A E+G + +A+ + L FGE +G FQ+ DD LD D Sbjct: 170 DYLDMIAKKSGRLISAALEAGGVAGNATDEQLNNLVTFGEKIGRAFQIQDDFLDIMADDG 229 Query: 236 K 236 K Sbjct: 230 K 230 >gi|296283988|ref|ZP_06861986.1| geranyltranstransferase [Citromicrobium bathyomarinum JL354] Length = 308 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 87/237 (36%), Positives = 131/237 (55%), Gaps = 8/237 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61 L L +D D LL + L+ A+R+A + GGK++R L+ Sbjct: 15 ARLKMALATIRTDVDDAFDALLP-----VPGDTRAPLVEAMRHAAIGGGKRVRPLLLVAT 69 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A++ V+ A+ G A+E IH YSLIHDDLP MD+ +RRGKPTVH +DE TA++AG+ Sbjct: 70 ATMLGVSREAAVLAGTAVESIHVYSLIHDDLPCMDDDDMRRGKPTVHKAFDEATAVLAGD 129 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179 L AF+I++ I+++L+ L G+ GM GGQ +D+ D + Sbjct: 130 ALHALAFDILTDSSVSSDPFIQAELVRCLAQASGMSGMAGGQAMDMAADSATYDLPTITR 189 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +Q++KTGAL+ + E GAI+A + + L + ++G+ FQ+ADDLLD E D K Sbjct: 190 LQQLKTGALLTASVEMGAILARVPHDARGHLIAYARDIGLAFQIADDLLDHEGDEDK 246 >gi|212550849|ref|YP_002309166.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549087|dbj|BAG83755.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 321 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 14/211 (6%) Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91 + L + Y L + GK+IR LF N A+ V A E H ++L+HDD Sbjct: 20 PKQPKELYEPMIYLLSMKGKRIRPIFTLMACRLFQENIKCAIDVALAWEIFHNFTLMHDD 79 Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151 + +DN ++RRG+ TVH ++++ A++AG+ +L A++ I+ Q +D +L Sbjct: 80 I--IDNAFLRRGQSTVHTKWNKTIALLAGDSMLILAYKYIAKSPLQYRD------ILLHL 131 Query: 152 HNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208 + + GQ D+ E + + + + ++KT L+ SGAI+ AS + + Sbjct: 132 FSSIAAKVCEGQAYDMLLENRLDVRKKEYLELVRLKTATLLSACLYSGAIVGGASGQDAK 191 Query: 209 RLRCFGENLGIIFQLADDLLDCEED--LPKK 237 L+ FG NLGI FQ+ DD+LD + K+ Sbjct: 192 FLQDFGINLGIAFQIQDDMLDVYGNSSFGKE 222 >gi|167044388|gb|ABZ09065.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote HF4000_APKG6D3] Length = 283 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 15/225 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L K K+I+ +LD S ++ ++YAL GGK+IR ++ + Sbjct: 11 LLEKYSAYIKKINNVLD-------SELELYTESEFKEPLKYALGGGKRIRPIILLLASEC 63 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 L AIE +H S+IHDD+ +DN +RR K HI+Y T+++ G+ +L Sbjct: 64 VGEIDDNTLAAACAIEFLHTESVIHDDI--IDNETLRRQKDPFHIKYGYNTSVLTGDFVL 121 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 I S +N R L+ T + +G + L+ E + + + K Sbjct: 122 GLILNIASRI-----NNPRVTKNLATTAMMMSEGEVIESRLE-ASEDVTFDDYLKVIEYK 175 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T A GAI++ ++ E E L +G+N+GI +Q+ DDLLD Sbjct: 176 TATAFETASRLGAIISGGTEEEIESLADYGKNIGIAYQIRDDLLD 220 >gi|153217175|ref|ZP_01950939.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587] gi|124113799|gb|EAY32619.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587] Length = 282 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 2 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 59 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 60 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 113 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 114 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 173 Query: 229 DCEED 233 D D Sbjct: 174 DYTSD 178 >gi|312962998|ref|ZP_07777484.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6] gi|311282767|gb|EFQ61362.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6] Length = 322 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRETA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS I +G + Q+ + Sbjct: 100 NAMWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMKILSQATRIIAEGEVL-QLSKV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A + AS + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCGASAEQAEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|317046711|ref|YP_004114359.1| polyprenyl synthetase [Pantoea sp. At-9b] gi|316948328|gb|ADU67803.1| Polyprenyl synthetase [Pantoea sp. At-9b] Length = 323 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPMIAVLSARALNYQGSQHITNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q++++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSMGS-----LKILALMSEAVNVIAEGEVL-QLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A ++ AI+A A+ +++ L+ +G +G FQL DDLL Sbjct: 155 DPDITEENYMRVIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYIGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|119945899|ref|YP_943579.1| geranyltranstransferase [Psychromonas ingrahamii 37] gi|119864503|gb|ABM03980.1| farnesyl-diphosphate synthase [Psychromonas ingrahamii 37] Length = 296 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 82/233 (35%), Positives = 129/233 (55%), Gaps = 9/233 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63 L L + +R+D L+ + T + L A+ Y ALLGGK++R FLV Sbjct: 4 LAETLNQYQQRVDKNLNKYINITHPI-----SPLLNEAMGYGALLGGKRVRPFLVYAVGD 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + + + AA+ECIH YSLIHDDLP+MD+ +RRG+ T H ++DE TAI+AG+ L Sbjct: 59 MLGCSLQSLDPLAAAVECIHAYSLIHDDLPAMDDDDLRRGQMTCHKKFDEATAILAGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181 T AF+IIS P + + +++ L G GM GQ LD +++ ++ + I Sbjct: 119 QTLAFDIISMPNKAITAQAQLKMVNFLAKAAGDHGMCAGQALDLVAENQSVNLVTLQKIH 178 Query: 182 KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KTGAL+ A + A+ + ++ + L F + +G+ FQ+ DD+LD D Sbjct: 179 QAKTGALIKVAIQLAAMTKSDLHEDHFQLLNTFADAIGLAFQVQDDILDIIGD 231 >gi|304394308|ref|ZP_07376231.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130] gi|303293748|gb|EFL88125.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130] Length = 300 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 98/237 (41%), Positives = 151/237 (63%), Gaps = 5/237 (2%) Query: 3 GGLPSKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60 L ++ + + ++ LD +L +A+ + Q +RL++A+R+ L GGK++R FLV E Sbjct: 2 ADLKLQMAKIADAVNGWLDVELNADSAAEGERQRPERLVAAMRHGVLNGGKRVRPFLVVE 61 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A+LF V+ AL A+EC+H +SL+HDDLP+MD+ +RRG+PTVH +DE AI+AG Sbjct: 62 SAALFGVSLDDALPTACALECLHSFSLVHDDLPAMDDDDLRRGQPTVHKAFDEALAILAG 121 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178 + L T AF+I++S ++ +R +L L G GM+GGQ+LDI+ E + ++ Sbjct: 122 DALSTLAFDILAS-RSSADAAVRCELTTMLARASGWGGMIGGQVLDIEAEDGAPTDAEIR 180 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q MKTGAL+ FACE+GA++ A + LR +GE +G+ FQLADD+LD D Sbjct: 181 TLQAMKTGALIRFACEAGAVLGGADDAARAALRSYGETVGLAFQLADDILDVTADTA 237 >gi|258544867|ref|ZP_05705101.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC 15826] gi|258519890|gb|EEV88749.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC 15826] Length = 326 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 26 QTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 + + Q L ++YA+ GGK+ R L L + A+ A IE IH Sbjct: 22 EALMRAEMQSEVPLAELVMQYAIGDGGKRFRPLLTLLSCGLCDYRGEHAITAAAFIEFIH 81 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 +L+HDD+ +D +RRGKP+ +I + +++ G+ L T AF+++ Sbjct: 82 NATLLHDDV--VDESALRRGKPSANIAFGNAASVLVGDFLYTRAFQLMVRTGNSA----- 134 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 M++ N+ G + Q+ ++ D +DE + + + ++KT L AC++ ++A Sbjct: 135 VIAMMADAVNLIAAGEVM-QLGNMHDPDVDEPRYYRVIELKTAVLFAAACKTAGLLAGLP 193 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + E+L +G LG+ FQ+ DDLLD D Sbjct: 194 EARSEQLAVYGRKLGMAFQIMDDLLDYTGDEA 225 >gi|167630030|ref|YP_001680529.1| heptaprenyl diphosphate synthase component ii, putative [Heliobacterium modesticaldum Ice1] gi|167592770|gb|ABZ84518.1| heptaprenyl diphosphate synthase component ii, putative [Heliobacterium modesticaldum Ice1] Length = 320 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 15/235 (6%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M L ++Q + +++ L + + + + L + GGK++R V Sbjct: 1 MQFQLFHEIQADLAKVEAELQKYVDTSLPTLTAASSHLLHA-------GGKRLRPAFVLL 53 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 N L + A+E IH +L+HDD+ +D RRG PTV ++ ++ G Sbjct: 54 AGKFHNYALERLLPLAVALELIHMATLVHDDV--VDESKTRRGIPTVRARWGNRISLHTG 111 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + L + +IS + +++ + + QM D Sbjct: 112 DHLFARSLLLISELNDPAMTAVLAKISVEMCEGEI------QQMEATYDVHQTFRDYLYR 165 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 K KT L+ +C+ GA+ A + L+ +G +LG+ FQ+ DD+LD D Sbjct: 166 IKRKTALLIAASCQLGAMAVKADPSAVRALKMYGHHLGMAFQITDDILDMTADEK 220 >gi|323489688|ref|ZP_08094915.1| heptaprenyl diphosphate synthase component II [Planococcus donghaensis MPA1U2] gi|323396819|gb|EGA89638.1| heptaprenyl diphosphate synthase component II [Planococcus donghaensis MPA1U2] Length = 324 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 18/235 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L S L+ + I+ L+ + + S + + LL A GGK+IR V Sbjct: 9 LYSDLKPELEMIEKELEQAV-DSKSLLLNDASLHLLQA------GGKRIRPVFVLLAGKF 61 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 N N +V +E IH SL+HDD+ +D+ IRRG+PTV Q++ A+ G+ +L Sbjct: 62 GNYNVDVMKQVAVPLELIHMASLVHDDV--IDDSEIRRGQPTVKAQWNNSVAMYTGDFIL 119 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 A E I+ ++ I S+ ++ + + Q+ D + F K K Sbjct: 120 ARALEHITEIESPRVHEILSKTLIEVCRGEII------QIQDKYRLDQNLRDYFRRIKRK 173 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 T L+ +CE GA+++ + LR FG +G+ FQ+ DD+LD E+L K Sbjct: 174 TALLISSSCELGALVSGTDEKTAAHLRRFGYFIGMSFQIIDDILDFTSTDEELGK 228 >gi|257083890|ref|ZP_05578251.1| geranyltranstransferase [Enterococcus faecalis Fly1] gi|256991920|gb|EEU79222.1| geranyltranstransferase [Enterococcus faecalis Fly1] Length = 293 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 86/235 (36%), Positives = 133/235 (56%), Gaps = 15/235 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 Q++ ++ ++ + + N+RL A+ Y++ GGK++R LV + F Sbjct: 6 QQHLPLVEKVMVAFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 T +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 F+++S + L + + L G QGM+ GQM DI+ E + ++ + + KT Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237 GAL+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD E DL KK Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232 >gi|78357244|ref|YP_388693.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219649|gb|ABB38998.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 304 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 129/236 (54%), Gaps = 10/236 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + +L + ++ L L LL A+ Y+LL GGK++R L A Sbjct: 11 AMKQRLAAEALEVEAYLGGCLKGRGIPCD------LLKAMDYSLLAGGKRLRPVLCLTTA 64 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 LF + L AAIE IH YSL+HDDLP+MD+ +RRG P+ H ++ E TAI+AG+G Sbjct: 65 GLFGLARDAVLPFAAAIELIHTYSLVHDDLPAMDDDDLRRGMPSNHKKFGEATAILAGDG 124 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--- 179 LLT AF +++S ++ + + + G GM+GGQMLD++ + + M Sbjct: 125 LLTEAFCLMASAGAAVEASRVLSALSVVAAAAGAGGMVGGQMLDMEYTGRADVSLDMLRG 184 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + MKTGAL+ +C +GA++A A + ER+ +GE +G FQ+ DD+LD D Sbjct: 185 MHAMKTGALIRCSCLAGALLAGAPHEDAERISHYGEAIGAAFQIVDDILDETGDEA 240 >gi|83746515|ref|ZP_00943566.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Ralstonia solanacearum UW551] gi|207743826|ref|YP_002260218.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum IPO1609] gi|83726846|gb|EAP73973.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Ralstonia solanacearum UW551] gi|206595226|emb|CAQ62153.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum IPO1609] Length = 299 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 123/236 (52%), Gaps = 9/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 + R ++ L+ L ++ RL +A+RYA LG GK++R LV Sbjct: 2 SDFAQWMASIVARTESALERALP-----GESVAPQRLHAAMRYATLGAGKRVRPLLVHAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +L + RV A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+ Sbjct: 57 GALGEASPEALDRVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF +++ + R+ L+ L G GM GGQ +D+Q + + + Sbjct: 117 ALQTQAFVVLAELGA-VSPVTRAALVGELARASGSLGMAGGQAIDLQSVGVALSQDALET 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +MKTGAL+ + GA+ A + E++ + +G+ FQ+ DD+LD D Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVGLAFQVVDDILDVTADTA 231 >gi|262403940|ref|ZP_06080497.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] gi|262349902|gb|EEY99038.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. RC586] Length = 323 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----LKILKLMSDAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ AS + ++ +G+ LG FQL DD++ Sbjct: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASSEVELAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|262392448|ref|YP_003284302.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] gi|262336042|gb|ACY49837.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e/geranylgeranyl pyrophosphate synthetase [Vibrio sp. Ex25] Length = 323 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSNAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A ++ + ++ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|241663625|ref|YP_002981985.1| polyprenyl synthetase [Ralstonia pickettii 12D] gi|240865652|gb|ACS63313.1| Polyprenyl synthetase [Ralstonia pickettii 12D] Length = 303 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 79/236 (33%), Positives = 122/236 (51%), Gaps = 9/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 + R ++ LD L +T RL +A+RYA LG GK++R L Sbjct: 2 SDFAQWMASVVARTESALDRALPP-----ETVAPQRLHAAMRYATLGAGKRVRPLLAHAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +L + + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+ Sbjct: 57 GALGDASPAALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF +++ + R+QL+ L G GM GGQ +D+Q + + + Sbjct: 117 ALQTQAFILLAELGA-VSAPTRAQLVGELARASGSLGMAGGQAIDLQSVGVALSQDALEA 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +MKTGAL+ + GA+ A + E + + +G+ FQ+ DD+LD D Sbjct: 176 MHRMKTGALLRASLRMGALCAGLNAAALEHVDTYAGAVGLAFQVVDDILDVTADTA 231 >gi|254230032|ref|ZP_04923431.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] gi|151937420|gb|EDN56279.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25] Length = 287 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 7 GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 64 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 65 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSNAVNVIAEGEV-QQLMNCN 118 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A ++ + ++ +G+ LG FQL DD++ Sbjct: 119 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVM 178 Query: 229 DCEED 233 D D Sbjct: 179 DYTSD 183 >gi|124494325|gb|ABN13218.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494345|gb|ABN13237.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii str. W23] gi|124494365|gb|ABN13256.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494405|gb|ABN13294.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] Length = 348 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++ + L A + L GGK+IR V + + V +E Sbjct: 43 DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 102 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+ +L + E+++ Sbjct: 103 MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAH 160 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 I SQ ++ + Q+ D + + K KT L+ +C+ GAI + Sbjct: 161 RILSQTIVEVCLGEI------EQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 214 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A + + L FG +G+ +Q+ DD+LD EE+L K Sbjct: 215 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 253 >gi|323701812|ref|ZP_08113482.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] gi|323533116|gb|EGB22985.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574] Length = 320 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 109/236 (46%), Gaps = 18/236 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 S ++E+ +++ + ++ Q+ + T+ + +LL+A GGK++R Sbjct: 3 DFFSLIREDLGMVESEIRKVV-QSRDSLLTKTSLQLLNA------GGKRLRPAFALLAGR 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L++ + + + A+E IH +L+HDD+ +D+ RRG PTV + ++ G+ L Sbjct: 56 LYDADVEKLIPLAVALELIHMATLVHDDV--VDDSMTRRGTPTVKANWGNKISMHTGDYL 113 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + +IS+ K L + ++ + + Q+ F + Sbjct: 114 FAKSLVLISTYKEPLIAELLAKTSVKMCEGEIH------QISTAYSANQSWRDYFYRIER 167 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 KT L+ +C+ GA+ A A + +RL FG LG+ FQ+ DD+LD D L K Sbjct: 168 KTALLIAASCQLGAVAAGAPAKDHKRLGKFGHQLGMAFQITDDILDMVADQRELGK 223 >gi|16079331|ref|NP_390155.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|399776|sp|P31114|HEPS2_BACSU RecName: Full=Heptaprenyl diphosphate synthase component 2; Short=HEPPP synthase subunit 2; AltName: Full=Spore germination protein C3 gi|143803|gb|AAA20856.1| GerC3 [Bacillus subtilis] gi|2634692|emb|CAB14190.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|124494285|gb|ABN13180.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|124494305|gb|ABN13199.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494385|gb|ABN13275.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494445|gb|ABN13332.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. SMY] Length = 348 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++ + L A + L GGK+IR V + + V +E Sbjct: 43 DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 102 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+ +L + E+++ Sbjct: 103 MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAH 160 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 I SQ ++ + Q+ D + + K KT L+ +C+ GAI + Sbjct: 161 RILSQTIVEVCLGEI------EQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 214 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A + + L FG +G+ +Q+ DD+LD EE+L K Sbjct: 215 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 253 >gi|220936362|ref|YP_002515261.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] gi|219997672|gb|ACL74274.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 322 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLVLLSARACGAGDRRHIDLAAIIEFIHTATLLHDDV--VDASELRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ + +R +L+ T N +G + Q+L+ Sbjct: 101 ALFGNEASVLVGDFLYSRSFEMMVEIGS-----MRVMEILAHTTNTIAEGEVL-QLLNCH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + + KT L A GA++ ++ ++ + +G +LG FQL DD+L Sbjct: 155 DADTPEERYMEVIQSKTAKLFEAAARIGAVLGGQPESVEQAMAAYGMHLGTAFQLIDDVL 214 Query: 229 DC---EEDLPK 236 D E++ K Sbjct: 215 DYGASAEEMGK 225 >gi|320157514|ref|YP_004189893.1| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferas e [Vibrio vulnificus MO6-24/O] gi|319932826|gb|ADV87690.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O] Length = 323 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S NI +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNIIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A + L+ +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|315452919|ref|YP_004073189.1| geranyltranstransferase [Helicobacter felis ATCC 49179] gi|315131971|emb|CBY82599.1| geranyltranstransferase [Helicobacter felis ATCC 49179] Length = 296 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 9/222 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA---LR 74 ++ L + + T H + GGK+ R L F T Sbjct: 16 EAFEEYLHKAKPRLDTFHPFFEKAFWEMLENGGKRFRPKLFLAVLCAFEEKIETIHACFP 75 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A+E +H YSLIHDDLP MDN RR PT+H YDE TA + G+GL TYAFE++++ Sbjct: 76 IALALEVLHTYSLIHDDLPCMDNADTRRYHPTLHKSYDETTATLVGDGLNTYAFELLAT- 134 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 L D ++ L+ +L G+ GM+ GQ LD E ++ Q+ + +KT L+ + Sbjct: 135 -NSLPDRLKISLITTLAQCGGIGGMVLGQALDCHFEHQTLNLQQLETLHTLKTAKLIAAS 193 Query: 193 CESGAIMAHAS--QNEKERLRCFGENLGIIFQLADDLLDCEE 232 + GA++ S + L FG LG+ FQ+ DD++D + Sbjct: 194 LKMGALIVCDSLETDISHSLFTFGLKLGLFFQVRDDIIDRTQ 235 >gi|78187619|ref|YP_375662.1| geranyltranstransferase [Chlorobium luteolum DSM 273] gi|78167521|gb|ABB24619.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase [Chlorobium luteolum DSM 273] Length = 330 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 19/236 (8%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63 + K + KRI+ L + L + RY L G GK+IR FL + Sbjct: 8 VEQKYRAYHKRINDAL-------GACFSATTPATLYAPARYILEGKGKRIRPFLTLLASE 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + N AL+V A+E +H ++L+HDD+ MD +R +PTVH +++ AI++G+ + Sbjct: 61 AVSGNSENALKVALAVEVLHNFTLMHDDI--MDEAELRHNRPTVHREWNANVAILSGDMM 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMI 180 + YA+E+ ++ L N + GQ LD++ E + Sbjct: 119 IAYAYELALEAESHR------HCELIHILNHANITICEGQALDMELEEKQDATIADYLDM 172 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 KTG L+ A E+G + A A++ + + L FGE +G FQ+ DD LD + K Sbjct: 173 ISKKTGRLISAALEAGGVSADATREQLQSLVLFGEKIGRAFQIQDDYLDIMAEDGK 228 >gi|78048472|ref|YP_364647.1| geranyltranstransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036902|emb|CAJ24595.1| Geranyltranstransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 291 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 1/209 (0%) Query: 25 LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83 L+ T RL +A+R+A+LGG K++R LV +LF A+E IH Sbjct: 17 LEAGLPRATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIH 76 Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143 YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE++++ + + Sbjct: 77 AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLATASASAELRVS 136 Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203 L+ +D + + + +KTGAL+ A GA+ A+ Sbjct: 137 WIQSLATAAGAAGMCGGQALDIDATGQLQSLQDLQRMHALKTGALIRAAVRMGALTGGAA 196 Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232 +++RL F + LG+ FQ+ DD+LD E Sbjct: 197 AADQQRLDEFADALGLAFQVRDDILDVES 225 >gi|90020654|ref|YP_526481.1| phage tail region protein [Saccharophagus degradans 2-40] gi|89950254|gb|ABD80269.1| Trans-hexaprenyltranstransferase [Saccharophagus degradans 2-40] Length = 320 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 12/197 (6%) Query: 44 RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 Y + GGK++R LV A N L + A IE IH +L+HDD+ +D +RR Sbjct: 35 HYIVDAGGKRLRPLLVLLTARALGYNGNQHLSLSAIIEFIHTATLLHDDV--VDVSALRR 92 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G+PT + + +++ G+ L + AF+++ + L+ T N+ +G + Sbjct: 93 GRPTANANWGNAPSVLVGDFLYSRAFQMMVEIG-----EMGIMKELANTTNVISEGEV-Q 146 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q+++ ++ + E + KT AL ACE+ AI+A A + +R +G +LG+ FQ Sbjct: 147 QLVNARNPEVTEQNYMTVIHKKTAALFEAACETAAILAGADAATCKAVRSYGYHLGVAFQ 206 Query: 223 LADDLLDCEED---LPK 236 L DD+LD + D L K Sbjct: 207 LVDDVLDYQGDAEELGK 223 >gi|71278535|ref|YP_271161.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H] gi|71144275|gb|AAZ24748.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H] Length = 327 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A F L + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRMRPMLTVLAARAFAYQGDKHLEIAAIIEFIHTATLLHDDV--VDESNMRRGRETAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ ++R +LS NI +G + Q+++ Sbjct: 105 ALFGNSASVLVGDFLYTRSFQMMTKLG-----DMRIMDILSEATNIVAEGEVL-QLMNCN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++A ++ + +G+ LG FQL DD++ Sbjct: 159 DASTTEESYMQVIYCKTAKLFEAATRLAAVIAKQDAKIEQAMADYGKYLGTAFQLVDDIM 218 Query: 229 DCEEDLP 235 D D Sbjct: 219 DYTADAK 225 >gi|212636824|ref|YP_002313349.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3] gi|212558308|gb|ACJ30762.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3] Length = 323 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + N + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLSILAARAIDYNGESHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ K+ + +L+ N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELKS-----LEVLEILADATNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A +S+ + L +G+ LG FQL DDLL Sbjct: 155 DPDTTEDSYMRVIYCKTAKLFEAATRLAGLLAESSEEVQTALAEYGKFLGTAFQLTDDLL 214 Query: 229 DC---EEDLPK 236 D E+L K Sbjct: 215 DYTAETEELGK 225 >gi|56459585|ref|YP_154866.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] gi|56178595|gb|AAV81317.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR] Length = 324 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L ++ IE IH +L+HDD+ +D +RRG+ T + Sbjct: 44 GGKRLRPLLAILACRALGYEGNDHRKLATIIEFIHTATLLHDDV--VDESELRRGRKTAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AF+++ D++R +L+ NI +G + Q+++ Sbjct: 102 AVFGNEASVLVGDFLYTRAFQLMVDL-----DSLRILRILADATNIISEGEVL-QLMNCN 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E F + KT L A E ++ + ++L +G LG FQL DDL+ Sbjct: 156 DPDTSEASYFNVIYGKTAKLFEAATELAGVLTAQDEKVTQQLADYGRYLGTAFQLVDDLM 215 Query: 229 DCEEDLP 235 D D Sbjct: 216 DYTADSE 222 >gi|291557469|emb|CBL34586.1| farnesyl-diphosphate synthase [Eubacterium siraeum V10Sc8a] Length = 302 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 10/239 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60 +GG + +E + L + + L A Y+L GGK+IR L E Sbjct: 12 DGGFDAVFREYRAIFEKQLRTVCDSFCDNGAKYRA--LYDAASYSLEAGGKRIRPVLAFE 69 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + + A+ A+E IH +SLIHDDLP MD+ +RRG+P+ H + E A++AG Sbjct: 70 MCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDDDDMRRGRPSCHKAHGEAVALLAG 129 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + L YA + I + L ++ ++ L GM+ GQ +D +F + + Sbjct: 130 DALSAYAGKYICD--SDLPAEKKTAMIKELYDR--TLGMIEGQTIDTDGKFDTLDGLLSM 185 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 +MKT L+ A G I A A + + R + ++G+ FQ+ DD+LD E+L K Sbjct: 186 YEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILDVTSTVEELGK 244 >gi|124494465|gb|ABN13351.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494485|gb|ABN13370.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494505|gb|ABN13389.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] gi|124494525|gb|ABN13408.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] Length = 348 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++ + L A + L GGK+IR V + + V +E Sbjct: 43 DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 102 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+ +L + E+++ Sbjct: 103 MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAH 160 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 I SQ ++ + Q+ D + + K KT L+ +C+ GAI + Sbjct: 161 RILSQTIVEVCLGEI------EQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 214 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A + + L FG +G+ +Q+ DD+LD EE+L K Sbjct: 215 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 253 >gi|312874544|ref|ZP_07734569.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b] gi|315653403|ref|ZP_07906325.1| geranyltranstransferase [Lactobacillus iners ATCC 55195] gi|311089935|gb|EFQ48354.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b] gi|315489328|gb|EFU78968.1| geranyltranstransferase [Lactobacillus iners ATCC 55195] Length = 288 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 22/236 (9%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69 +I++ L + L T ++ + + Y+ L GGK++R L + + Sbjct: 10 YLPQINSFLKEQLECTI------NDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +++ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + Sbjct: 64 EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184 I+ +L+ +T IG GM GGQ +DI +ET + ++ +K Sbjct: 124 WIAEASNS------YELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLK 177 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237 TG L+ + + A A+++ + L F E G +Q+ DD++D + KK Sbjct: 178 TGCLIVASVQMAAKYANSNDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233 >gi|163867858|ref|YP_001609062.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476] gi|161017509|emb|CAK01067.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476] Length = 338 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 15/223 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 Q++ +R++ + + ++ M + ++ L+S+ GGK++R + A +F Sbjct: 25 QKDMERVNQFILSM-AKSEIEMIPEISNHLISS------GGKRLRPMITLASAHMFGYQS 77 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +++ A+E +H +L+HDD+ +D +RRGK T + + +I+ G+ LL AF+ Sbjct: 78 DGHIKLATAVEFMHTATLLHDDV--IDESDLRRGKSTARMIWGNQASILVGDFLLGQAFK 135 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++ + I + +L+ I +G + Q+ ++ + I KT AL Sbjct: 136 MMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSAAKNIKTSSSDYLKIINAKTAALF 189 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A E G I+A E+ LR +G +LG+ FQL DD LD Sbjct: 190 SAAAEVGPIVAGYGHKERSALREYGTSLGLAFQLIDDALDYSG 232 >gi|255318787|ref|ZP_05360013.1| geranyltranstransferase [Acinetobacter radioresistens SK82] gi|262378949|ref|ZP_06072106.1| geranyltranstransferase [Acinetobacter radioresistens SH164] gi|255304043|gb|EET83234.1| geranyltranstransferase [Acinetobacter radioresistens SK82] gi|262300234|gb|EEY88146.1| geranyltranstransferase [Acinetobacter radioresistens SH164] Length = 302 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 80/234 (34%), Positives = 126/234 (53%), Gaps = 13/234 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66 L++ +RI L L + + L SA+ +A+ LGGK++R L A+L N Sbjct: 12 LKQAQERIQQDLLSALEAFSL------PEPLKSAVYHAVMLGGKRVRPALCYATAALQPN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N R AIE IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L + Sbjct: 66 SNFAAVRRAAVAIEMIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182 AFE++ S + ++L M+ GQ++D+Q E +D++Q+ I + Sbjct: 126 AFEVLGSRLFDQGVAVDQAVVLRQMQILATASSKMVCGQVMDLQAEGKQVDQSQLENIHR 185 Query: 183 MKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KTGAL+ A A+ + + + +LR +G+ +G+ FQ+ DD+LD + Sbjct: 186 NKTGALIQAAIMMAAVTIFNGTDQAIPQLRQYGQAIGLAFQVQDDILDIVSETE 239 >gi|331000286|ref|ZP_08323970.1| octaprenyl pyrophosphate synthetase [Parasutterella excrementihominis YIT 11859] gi|329572452|gb|EGG54105.1| octaprenyl pyrophosphate synthetase [Parasutterella excrementihominis YIT 11859] Length = 326 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 60/227 (26%), Positives = 117/227 (51%), Gaps = 17/227 (7%) Query: 7 SKLQENSKRID-TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 + + E+ +D ++DDL Q+ + + +D +++A GGK++R ++ A Sbjct: 13 APISEDLLAVDREVIDDL--QSDIPLIKKISDYIVTA------GGKRMRPIVLMLIARAL 64 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + + IE +H SL+HDD+ +D +RRGKPT ++ AI+ G+ + + Sbjct: 65 GYQGKEHIFLATMIEYVHTASLLHDDV--VDESDLRRGKPTAGFKWGNAPAILTGDFMYS 122 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 AF+++ + N+R +++ N +G + Q+L+I D +DE + F + + KT Sbjct: 123 RAFQLMVRTQ-----NLRICEIVAGAVNRVSEGEVI-QLLNIHDTTLDEARYFDVIERKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G L A +++A AS+ ++++ + LG FQ+ DD+LD Sbjct: 177 GVLFEAAARMASVVAGASKEVEDKMAEYALCLGRAFQIIDDVLDYTG 223 >gi|323466278|gb|ADX69965.1| Geranyltranstransferase [Lactobacillus helveticus H10] Length = 289 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 17/226 (7%) Query: 19 ILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRV 75 ++DD L A H+ ++ N ++ + Y+++ GGK++R L + +R+ Sbjct: 14 VIDDYL---AKHLASEVDNQKISQIMAYSVMAGGKRLRPLLFLATLNTLGRKIDEPEIRI 70 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 71 ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEGS 130 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMC 190 +QL+ +T +G GM+GGQ LDI D + ++ +KTG L+ Sbjct: 131 QS------AQLVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKFINQMEWLKTGCLIQ 184 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + E A+ A AS E+ +L F + G +Q+ DDL+D E K Sbjct: 185 ASVEMAAVYAKASDIEQVKLIDFAKAFGRSYQIYDDLVDVVETSEK 230 >gi|295425229|ref|ZP_06817932.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664] gi|295065005|gb|EFG55910.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664] Length = 289 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 17/234 (7%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASL 64 + + K+ ++++ L H+ + +D ++ + Y+++ GGK++R L + Sbjct: 2 TAFKYFQKQWTPVINEYL---NKHLANEVDDQKISQIMAYSVMAGGKRLRPLLFLATLNT 58 Query: 65 FNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +R+ IE IH YSLIHDDLP+MDN RRGK T H ++ E +I+AG+ L Sbjct: 59 LGKEITEDEIRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAESILAGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVF 178 L + I+ ++L+ +T +G GM+GGQ LDI D + Sbjct: 119 LPMGIQWIAEGSKS------AELVQIITQAVGPNGMVGGQYLDIDSTNNQSVAGDAKFIN 172 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 ++ +KTG L+ + + A++ ASQ E+ +L F + G +Q+ DDL+D E Sbjct: 173 RMEWLKTGCLIEASVKMAAVLVGASQIEEVKLVDFAKVFGRSYQIYDDLVDVVE 226 >gi|294013329|ref|YP_003546789.1| geranyltranstransferase [Sphingobium japonicum UT26S] gi|292676659|dbj|BAI98177.1| geranyltranstransferase [Sphingobium japonicum UT26S] Length = 305 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 133/213 (62%), Gaps = 3/213 (1%) Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82 L + RL A+R+A + GGK++R LV + LFN++ +ALRVG A+ECI Sbjct: 28 LFDRLLAVPDDPRRRLYEAMRHAAMDGGKRLRPLLVQAASDLFNISRESALRVGVAVECI 87 Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142 H YSL+HDDLP+MD+ +RRGKPTVH +DE TAI+AG+ L AFEI++ +T + Sbjct: 88 HVYSLVHDDLPAMDDDDMRRGKPTVHRAFDEATAILAGDCLHDLAFEILADEETHPDPFV 147 Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA 200 R +L+ +L G GM GGQM+D++ E D V +Q++KTGAL+ ++ AIMA Sbjct: 148 RIELVKALAVASGTSGMAGGQMMDLEAEKASFDLPTVTRLQQLKTGALIAVCVDAAAIMA 207 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + RL + ++G+ FQ+ADDLLD E D Sbjct: 208 LIPPEGRMRLHGYARDIGLAFQIADDLLDVEGD 240 >gi|241763806|ref|ZP_04761852.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN] gi|241366938|gb|EER61343.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN] Length = 309 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L+ + A +E IH +L+HDD+ +D +RRG+ T Sbjct: 29 AGGKRLRPALLLLICGALGYRGNHRFSLAAVVELIHTATLLHDDV--VDASTLRRGRATA 86 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L T +F+++ N+R +LS N+ +G + Q++++ Sbjct: 87 NQTFGNPASVLVGDFLHTRSFQMMVEAG-----NMRIMEVLSEATNVIAEGEVL-QLMNM 140 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D +DE + + KT L + GAI+A + +E +G+ LG FQ+ DD+ Sbjct: 141 HDASLDEAGYLQVIRSKTAKLFEASARLGAILAESPPQIEEACATYGQALGTAFQIIDDV 200 Query: 228 LDCEE 232 LD + Sbjct: 201 LDYDG 205 >gi|113460390|ref|YP_718452.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT] gi|112822433|gb|ABI24522.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT] Length = 326 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + A +E IH +L+HDD+ +D +RRG PT + Sbjct: 46 GGKRIRPMIALLAARALNYQGDEPITCAAFVEFIHTATLLHDDV--VDESDMRRGNPTAN 103 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ + +R ++S NI +G + Q++++ Sbjct: 104 AEFGNAASVLVGDFIYTRAFQLMTKLNS-----LRILQIMSDATNIIAEGEV-QQLMNVN 157 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI A ++ ++ L+ +G LG FQL DD+L Sbjct: 158 DPETSEDNYMKVIYSKTARLFEVATQCAAITAQSNAEQEIALQHYGRYLGTAFQLVDDVL 217 Query: 229 DCEE 232 D Sbjct: 218 DYSA 221 >gi|83953189|ref|ZP_00961911.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. NAS-14.1] gi|83842157|gb|EAP81325.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. NAS-14.1] Length = 301 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 89/218 (40%), Positives = 130/218 (59%), Gaps = 9/218 (4%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 DL + H + + A+RYA+ GGK +R+FLV E A L V A AIE Sbjct: 26 DLAIGQILHGLGGLDGTVAEAMRYAVTGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEA 85 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H YSL+HDD+P MD+ +RRG+PTVH+++DE TA++AG+ L T AFE++++ T D Sbjct: 86 LHAYSLVHDDMPCMDDDALRRGQPTVHVKWDEATAVLAGDALQTLAFELVAA--TGCGDA 143 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGA 197 R L+ L G++GM+GGQ +DI E + Q+ +Q KTGAL+ +A +G Sbjct: 144 ERVALVTGLARAAGVRGMVGGQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGP 203 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +MA ++ LR + NLG+ FQ+ADD+LD E D Sbjct: 204 VMAG---DDAAALRSYARNLGLAFQIADDILDVEGDAA 238 >gi|315606371|ref|ZP_07881386.1| geranyltranstransferase [Prevotella buccae ATCC 33574] gi|315251777|gb|EFU31751.1| geranyltranstransferase [Prevotella buccae ATCC 33574] Length = 323 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 69/228 (30%), Positives = 117/228 (51%), Gaps = 20/228 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 E + I+ LD L + L + I+Y L +GGK+IR L+ +LF + Sbjct: 5 DELLQLINRYLDSL-------PYDRKPASLYAPIKYVLSMGGKRIRPTLMLLAYNLFKDD 57 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L A+E H Y+L+HDDL MDN +RRG+PTVH +++ A+++G+ +L A+ Sbjct: 58 PEKILSSACALETYHNYTLLHDDL--MDNADVRRGQPTVHKKWNANLAVLSGDSMLVLAY 115 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKT 185 + ++ + L + +R + GQ +D++ E + E + + ++KT Sbjct: 116 QRMTECDSHLAEVLRL-------FTETALEIGEGQQMDMEFETRNDVREEEYIEMIRLKT 168 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L+ A + GA++A A ++ + L FGE +G+ FQL DD LD D Sbjct: 169 SVLLACAMKIGALLADAPADDADNLYRFGEKIGLAFQLQDDYLDVYGD 216 >gi|309809474|ref|ZP_07703332.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D] gi|308170146|gb|EFO72181.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D] Length = 288 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 22/236 (9%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69 +I++ L + L T ++ + + Y+ L GGK++R L + + Sbjct: 10 YLPQINSFLKEQLECTI------NDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +++ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + Sbjct: 64 EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184 I+ +L+ +T IG GM GGQ +DI +ET + ++ +K Sbjct: 124 WIAEASNS------YELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLK 177 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237 TG L+ + + A A +S + L F E G +Q+ DD++D + KK Sbjct: 178 TGCLIVASVQMAAEYASSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233 >gi|92112606|ref|YP_572534.1| trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM 3043] gi|91795696|gb|ABE57835.1| Trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM 3043] Length = 337 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 9/191 (4%) Query: 44 RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 RY + GGK++R LV A N + + IE +H +L+HDD+ +D ++RR Sbjct: 52 RYIIESGGKRLRPLLVLLAARSLNYPGDRHVTLATLIEFMHTSTLLHDDV--VDESHLRR 109 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK T + + +++ G+ L + +F+++ + +R +LS + +G + Sbjct: 110 GKATANDAWGNAPSVLVGDFLYSRSFQMMVEVGS-----MRVMEILSGATCVIAEGEVL- 163 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q+ +I + IDE F + KT L A SGA++A A+ ++E L+ +G LG+ FQ Sbjct: 164 QLTNIGNPDIDEAAYFDTIQGKTAMLFEAASHSGAVLAEATPAQEEALKLYGRYLGLAFQ 223 Query: 223 LADDLLDCEED 233 L DDLLD + D Sbjct: 224 LVDDLLDYQGD 234 >gi|300690860|ref|YP_003751855.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum PSI07] gi|299077920|emb|CBJ50559.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum PSI07] Length = 299 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 9/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 + R ++ L+ L + RL +A+RYA LG GK++R LV Sbjct: 2 SDFAQWMASVVARTESALERALP-----GEPVAPQRLHAAMRYASLGAGKRVRPLLVHAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +L + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++AG+ Sbjct: 57 GALGEASPDALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF +++ + R+ L+ L G GM GGQ +D+Q + + + Sbjct: 117 ALQTQAFIMLAELGA-VSPATRAVLVGELARASGSLGMAGGQAIDLQSVGVALSQEALET 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +MKTGAL+ + GA+ A + E++ + +G+ FQ+ DD+LD D Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVGLAFQVVDDILDVTADTA 231 >gi|308051079|ref|YP_003914645.1| trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799] gi|307633269|gb|ADN77571.1| Trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799] Length = 322 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + +++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPLLAVLAARAVDYQGDDHVKLAAIIEFIHTATLLHDDV--VDESTMRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ K R L+ N+ +G + Q+++ Sbjct: 101 ALFGNQASVLVGDFLYTRSFQMMTELKRP-----RVLEDLADATNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++A + L +G LG FQL DD+L Sbjct: 155 DPNTTEESYMQVIYCKTARLFEAATHLAAVIADQPTEVCDALSDYGRYLGTAFQLVDDVL 214 Query: 229 DCEEDLP 235 D D Sbjct: 215 DYTADAE 221 >gi|319407551|emb|CBI81201.1| octaprenyl-diphosphate synthase [Bartonella sp. 1-1C] Length = 337 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L S +E+ + ++ ++ + + + N + S GGK+IR + A + Sbjct: 19 LFSLTKEDMECVNQLIISMAQSNVAIIPEISNYLISS-------GGKRIRPMITLATAHM 71 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F +++ A+E +H +L+HDD+ +D +RRGK T I + +I+ G+ LL Sbjct: 72 FGYQGDKHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTARIIWGNQASILVGDFLL 129 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 AF+++ + + + +LS I +G + Q+ ++ + + I K Sbjct: 130 GQAFKMMVDVGS-----LDALSVLSNAAAIIAEGEIM-QLSAAKNIETNVSDYLKIINAK 183 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T AL A E G I+A E+ L +G +LG+ FQL DD+LD Sbjct: 184 TAALFSAAAEVGPIIAGYGPEERSALHQYGLSLGLAFQLIDDVLDYSS 231 >gi|156937956|ref|YP_001435752.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I] gi|156566940|gb|ABU82345.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I] Length = 327 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 106/237 (44%), Gaps = 19/237 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61 L L E +D + ++L L A R+ GGK++R LV Sbjct: 2 ETLTRYLSEFRPLVDKKIMEVLE--------GSPKELYEAARHLPSKGGKRLRPALVLLV 53 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 AL AA+E +H ++L+HDD+ MD +RRG PTVH+ Y E AI+AG+ Sbjct: 54 NKALGGEVEGALPAAAAVELLHNFTLVHDDI--MDRDELRRGVPTVHVLYGESMAILAGD 111 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178 L A+E + +L+ + + GQ +D++ E + E + Sbjct: 112 LLYAKAYEALLQSPQPPDLVKEMTEVLTWS----AVTVAEGQAMDMEFEKRWDVTEEEYL 167 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + + KTGAL + GA+ A+ + K+ ++ FG LG FQ+ DD+L D Sbjct: 168 EMIEKKTGALFGASAALGALTAN-KREVKDLMKEFGLILGKAFQIKDDVLSLLGDEK 223 >gi|308174066|ref|YP_003920771.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens DSM 7] gi|307606930|emb|CBI43301.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens DSM 7] gi|328912396|gb|AEB63992.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens LL3] Length = 320 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 12/219 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++ + L A + L GGK+IR V + + V +E Sbjct: 15 DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 74 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+ +L + E+++ D Sbjct: 75 MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRL-----D 127 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 ++ +LS T G + Q+ D + + K KT L+ +C+ GAI + Sbjct: 128 EPKAHRILSKTIVEVCLGEIE-QIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 186 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A + + L FG +G+ +Q+ DD+LD EE+L K Sbjct: 187 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 225 >gi|56420745|ref|YP_148063.1| heptaprenyl diphosphate synthase component II [Geobacillus kaustophilus HTA426] gi|56380587|dbj|BAD76495.1| heptaprenyl diphosphate synthasecomponent II (spore germination protein C3) [Geobacillus kaustophilus HTA426] Length = 320 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 8/225 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 KL+ ++ L + + +++++ +A+ GGK+IR V A + Sbjct: 2 KLKAMYSFLNDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + V A+E IH SL+HDD+ +D+ +RRG+PT+ ++ A+ G+ L + Sbjct: 62 DFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIKARWSNRFAMYTGDYLFARS 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E ++ + + ++ ++ + H Q+ D + KT Sbjct: 120 LERMAELDSPRAHQVLAKTIVEVCHGEI------EQIKDKYRFDQPLRTYLRRIRRKTAL 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ +C+ GA+ A A + +L FG +G+ FQ+ DD+LD Sbjct: 174 LIAASCQLGALAAGAPEAVANQLYWFGHCVGMSFQITDDILDFTG 218 >gi|118497514|ref|YP_898564.1| octaprenyl diphosphate synthase [Francisella tularensis subsp. novicida U112] gi|195536208|ref|ZP_03079215.1| polyprenyl synthetase family protein [Francisella tularensis subsp. novicida FTE] gi|118423420|gb|ABK89810.1| octaprenyl diphosphate synthase [Francisella novicida U112] gi|194372685|gb|EDX27396.1| polyprenyl synthetase family protein [Francisella tularensis subsp. novicida FTE] Length = 325 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 64/236 (27%), Positives = 115/236 (48%), Gaps = 18/236 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66 + K I ++ + + + + L++ I + ++ GGK++R LV A N Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L + Sbjct: 62 YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ S DN++ +L+ N +G + Q+L+ ++ + E + + KT Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173 Query: 187 ALMCFACESGAIMAHASQNEK---ERLRCFGENLGIIFQLADDLLDCEED---LPK 236 L ACE +++ QN + +R +G LG FQ+ADD+LD D L K Sbjct: 174 KLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGK 229 >gi|170717395|ref|YP_001783470.1| polyprenyl synthetase [Haemophilus somnus 2336] gi|168825524|gb|ACA30895.1| Polyprenyl synthetase [Haemophilus somnus 2336] Length = 330 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 113/235 (48%), Gaps = 20/235 (8%) Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFL 57 MN + S ++ + +++ + L Q S + L++ + Y ++ GGK+IR + Sbjct: 8 MNIHAIQSLIKTDMDKVNATI---LAQLNSDVA------LINQLGYYIVQSGGKRIRPMI 58 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 A N + A +E IH +L+HDD+ +D +RRG PT + ++ ++ Sbjct: 59 ALLAARALNYQGDEPITCAAFVEFIHTATLLHDDV--VDESDMRRGNPTANAEFGNAASV 116 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 + G+ + T AF++++ + +R ++S NI +G + Q++++ D E Sbjct: 117 LVGDFIYTRAFQLMTKLNS-----LRILQIMSDATNIIAEGEV-QQLMNVNDPETSEDNY 170 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KT L A + AI A ++ ++ L+ +G LG FQL DD+LD Sbjct: 171 MKVIYSKTARLFEVATQCAAITAQSNAEQEIALQHYGRYLGTAFQLVDDVLDYSA 225 >gi|332308087|ref|YP_004435938.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175416|gb|AEE24670.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 323 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A N+ + A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLTVLAARALNIQTEQHHTLAAIIEFIHTATLLHDDV--VDESTMRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ + D++R +LS N+ +G + Q+++ Sbjct: 101 EVFGNQASVLVGDFLYTRSFQMMVTL-----DSMRVMQILSDATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A A++ S+ + ++ +G+ LG FQL DD++ Sbjct: 155 DPNTTEESYMEVIYSKTARLFEAATLLAAVLTKQSEAIENAMQDYGKYLGTAFQLVDDIM 214 Query: 229 DCEEDLP 235 D D Sbjct: 215 DYASDSE 221 >gi|49475216|ref|YP_033257.1| octaprenyl-diphosphate synthase [Bartonella henselae str. Houston-1] gi|49238021|emb|CAF27227.1| Octaprenyl-diphosphate synthase [Bartonella henselae str. Houston-1] Length = 356 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A +F + +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 75 GGKRLRPMLTLASARMFGYQNDGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTAR 132 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +I+ G+ LL AF+++ + I + +L+ I +G + Q+ + Sbjct: 133 MIWGNQASILVGDFLLGQAFKMMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSATK 186 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + I KT AL A E G I+A E+ LR +G LG+ FQL DD L Sbjct: 187 NIETSISDYLKIINAKTAALFSAAAEVGPIIAGYGHEERLALREYGTFLGLAFQLIDDAL 246 Query: 229 DCEE 232 D Sbjct: 247 DYGG 250 >gi|71891880|ref|YP_277610.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795986|gb|AAZ40737.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 323 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 111/225 (49%), Gaps = 10/225 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 + + S+ + ++D+ + + + ++ + ++Y + GGK+IR + A Sbjct: 3 IDQISELTEQDMEDVNSEIRTRLASEI-TLINKLVQYIVDSGGKRIRPMITLLTARALCY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + IE IH +L+HDD+ +D ++RRG+ T +I + +++ G+ + T A Sbjct: 62 KKTQHVTIATLIEFIHTATLLHDDV--VDKSHMRRGRKTTNIIFGNAASVLVGDFIYTRA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F++++ ++ +R +++ NI G + Q+ D I I KT Sbjct: 120 FQMMTELES-----LRILSLMADAVNIIAAGEIL-QLTHCNDPTITIDSYMKIIYSKTAR 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L A +S AI+A A+ +++ LR +G +GI FQL DD+LD Sbjct: 174 LFEVASQSSAILADANTCQEKALRNYGRYMGIAFQLVDDVLDYSA 218 >gi|330831008|ref|YP_004393960.1| trans-hexaprenyltranstransferase [Aeromonas veronii B565] gi|328806144|gb|AEB51343.1| Trans-hexaprenyltranstransferase [Aeromonas veronii B565] Length = 323 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 11/192 (5%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L A L++ A IE IH +L+HDD+ +D +RRG+ T Sbjct: 42 AGGKRMRPMLTVMAARALGYEGEDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +F++++ N+R +LS N +G + Q+++ Sbjct: 100 NAMFGNAASVLVGDYLYSRSFQMMAELS-----NLRVMEILSDATNTIAEGEVL-QLMNC 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E + KT L A A++ H + ++ + +G+ LG FQ+ DD+ Sbjct: 154 NDPDTTEESYMTVIYCKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDV 213 Query: 228 LDC---EEDLPK 236 +D E++ K Sbjct: 214 MDYCSQSEEMGK 225 >gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii] gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii] Length = 261 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 10/205 (4%) Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98 + A+RYA+ GG++ L A+ A+E I + DDLPS+D+ Sbjct: 1 MHDAMRYAVGGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDS 60 Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158 +R GKPTVH + TA+ AG LL FE ++ + + ++++ + IG G Sbjct: 61 ELRHGKPTVHRAFGIPTALFAGTALLALGFEHLA---ARYSGDTAARMVAEVGRAIGSTG 117 Query: 159 MLGGQMLD----IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214 +L GQ +D D ++ + + KT AL+ + +GAI AS+ E E LR +G Sbjct: 118 LLAGQAVDLGIENPDRGVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYG 177 Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236 G+++Q+ DD+ D E+L K Sbjct: 178 RVTGLLYQIVDDVADATKTMEELGK 202 >gi|217970068|ref|YP_002355302.1| trans-hexaprenyltranstransferase [Thauera sp. MZ1T] gi|217507395|gb|ACK54406.1| Trans-hexaprenyltranstransferase [Thauera sp. MZ1T] Length = 322 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 17/232 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + + + + +DT++ + L H R+ Y + GGK++R LV A Sbjct: 6 LFAPIAADMQAVDTVIRNRL-----HSDVALIRRIAE---YIVGSGGKRLRPALVLYAAG 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + + A +E IH SL+HDD+ +D +RRGK T + + +A++ G+ L Sbjct: 58 ALDYRGVHHHELAAVVEFIHTASLLHDDV--VDESDLRRGKRTANAAFGNASAVLVGDFL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + AF+++ D +R +L+ NI +G + Q+L+ + + + + Sbjct: 116 YSRAFQMMVG-----VDEMRVMRVLADATNIIAEGEVL-QLLNCHNADVVIEDYLRVIRY 169 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT L A G I+A A ++RL FG +LG FQL DD+LD D Sbjct: 170 KTAKLFEAAARLGGIVAGADDALEQRLAAFGMHLGTAFQLIDDVLDYSADEA 221 >gi|312883913|ref|ZP_07743630.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368371|gb|EFP95906.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC BAA-2122] Length = 323 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 9/189 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRVRPLLAIISAKALGYKGQGHTLSAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 SAFGNAASVLVGDYIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + E + KT L A + GA+++ A + L+ +G LG FQL DD++ Sbjct: 155 DPNVSEESYMQVIYSKTARLFEVATQVGAVLSEAPSEIEIALKNYGRYLGTAFQLIDDVM 214 Query: 229 DCEEDLPKK 237 D K+ Sbjct: 215 DYTS-TGKE 222 >gi|256545252|ref|ZP_05472617.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170] gi|256399079|gb|EEU12691.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170] Length = 277 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 74/224 (33%), Positives = 114/224 (50%), Gaps = 8/224 (3%) Query: 12 NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---N 66 N ++ D IL D ++ A + ++ L ++ YA GK+IR + E + Sbjct: 2 NKEKFDKILIADKNIIDMAMIKKFDEDNPLSESLIYASDSGKRIRPVVFLETIKMLLGEG 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + A+E +H YSL+HDD+P MDN RRGK TVH +Y E AI+ G+ LL+Y Sbjct: 62 SVDEKLIDLSLALEMVHAYSLVHDDMPCMDNDDYRRGKLTVHKKYGEDLAILVGDSLLSY 121 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKMKT 185 AFEII + D + L G GM+ GQ+ DI+ + + + + K KT Sbjct: 122 AFEIILDL--SIYDQRFLEAGKYLAKACGKDGMIKGQVFDIKSKKDENIEYILDVYKNKT 179 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 L A A+ A+ +++ E+L + LG+ FQL DD+LD Sbjct: 180 ARLFMAAIMMAALYANVEKDKLEKLENYAYYLGLAFQLQDDILD 223 >gi|221310190|ref|ZP_03592037.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. 168] gi|221314513|ref|ZP_03596318.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319435|ref|ZP_03600729.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. JH642] gi|221323711|ref|ZP_03605005.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. subtilis str. SMY] gi|321311744|ref|YP_004204031.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis BSn5] gi|291484698|dbj|BAI85773.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. natto BEST195] gi|320018018|gb|ADV93004.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis BSn5] Length = 320 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++ + L A + L GGK+IR V + + V +E Sbjct: 15 DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 74 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+ +L + E+++ Sbjct: 75 MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAH 132 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 I SQ ++ + Q+ D + + K KT L+ +C+ GAI + Sbjct: 133 RILSQTIVEVCLGEI------EQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 186 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A + + L FG +G+ +Q+ DD+LD EE+L K Sbjct: 187 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 225 >gi|325957123|ref|YP_004292535.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC] gi|325333688|gb|ADZ07596.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC] gi|327183847|gb|AEA32294.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1118] Length = 289 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 15/221 (6%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVG 76 ++DD L + + + ++ + Y+++ GGK++R L + +R+ Sbjct: 14 VIDDYLAKHLA--DEVDSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRIA 71 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 72 CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGSN 131 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCF 191 ++L+ +T +G GM+GGQ LDI D + ++ +KTG L+ Sbjct: 132 S------AELVKIITQAVGPNGMVGGQYLDIDSTNNESVAGDADFINKMEWLKTGCLIQA 185 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E A+ A A+ E+ +L + + G +Q+ DDL+D E Sbjct: 186 SVEMAAVYAKATDIEQVKLIDYAKAFGRSYQIYDDLVDVVE 226 >gi|226951627|ref|ZP_03822091.1| geranyltranstransferase (farnesyldiphosphate synthase) [Acinetobacter sp. ATCC 27244] gi|226837608|gb|EEH69991.1| geranyltranstransferase (farnesyldiphosphate synthase) [Acinetobacter sp. ATCC 27244] Length = 303 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 89/233 (38%), Positives = 129/233 (55%), Gaps = 16/233 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66 L++ +RI DLL A+ + L +A+ +A+ LGGK++R L ASL N Sbjct: 12 LKQAQQRIQQ---DLLTALAAF---SIPEPLKAAVHHAVMLGGKRVRPALCYATASLKPN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L + Sbjct: 66 HNFAAVRRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVVFGEDTALLAGDILQSM 125 Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 AFEI+ S + I SQ++L M+ GQ+LD+Q E +D+T++ I Sbjct: 126 AFEILGSRLFDEQGQGIDSQIVLKQMQILATASSKMVAGQVLDLQAEGKQVDQTELENIH 185 Query: 182 KMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA + A +LR FG+ +G+ FQ+ DD+LD Sbjct: 186 RNKTGALIQAAIMMGAVTVFAGTDPA-IPKLRQFGQTIGLAFQVQDDILDITA 237 >gi|332983459|ref|YP_004464900.1| polyprenyl synthetase [Mahella australiensis 50-1 BON] gi|332701137|gb|AEE98078.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON] Length = 323 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 8/203 (3%) Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89 H + + R+ + + GGK+IR LV F + A E IH SL+H Sbjct: 25 HAIGESDYRIRNMLSGLFNGGKRIRPRLVLLSGMCFGELDEKMIHAAVAAELIHTASLVH 84 Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149 DD+ +D RR PT++ A++AG+ L AFEI+S + + + Sbjct: 85 DDI--IDMSDYRRNNPTINSISGNHVAVLAGDFLFAKAFEILSEHELINSMLYFVNAIQN 142 Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209 + + Q D + E KT +L+C C +GA A A +E Sbjct: 143 MCSGEIV------QSYRRFDIRVTEQDYMDYIDKKTASLICACCMAGAQSAGAGSHEINL 196 Query: 210 LRCFGENLGIIFQLADDLLDCEE 232 + FG +G FQ+ DD+LD Sbjct: 197 MGSFGYKIGRAFQITDDILDVTG 219 >gi|13473247|ref|NP_104814.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Mesorhizobium loti MAFF303099] gi|14023995|dbj|BAB50600.1| geranyltranstransferase; farnesyl-diphosphate synthase [Mesorhizobium loti MAFF303099] Length = 305 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 112/236 (47%), Positives = 155/236 (65%), Gaps = 3/236 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 L + ++ +L LL + DRL++A+R+ L GGK++R FLV E A Sbjct: 8 AFEMALIRRAAAVEVLLRRLLDDRPLSGEIARPDRLMAAMRHGVLNGGKRLRPFLVMESA 67 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF+ + ALRV AA+EC+HCYSLIHDDLP+MD+ +RRG+PTVH +DE TAI+AG+ Sbjct: 68 ALFSADGEAALRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHKAFDEATAILAGDA 127 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180 LLT AF+I++S T L + R+ L+L+L G GM+GGQ LD++ E DE + + Sbjct: 128 LLTLAFDIVASEATVLPADRRAALVLALARAAGAGGMVGGQKLDLEAEQTPPDEAGIITL 187 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 Q MKTGAL+ FACE+GAI+A A ++ERL FG +G+ FQLADDLLD D + Sbjct: 188 QAMKTGALIRFACEAGAIIAGAPAEDRERLAEFGSAIGLAFQLADDLLDLTADAGQ 243 >gi|254475094|ref|ZP_05088480.1| polyprenyl synthetase [Ruegeria sp. R11] gi|214029337|gb|EEB70172.1| polyprenyl synthetase [Ruegeria sp. R11] Length = 294 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 95/238 (39%), Positives = 140/238 (58%), Gaps = 12/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALLGGKKIRSFLVTECA 62 + + S+ L + + +HM+ + ND L +A+RYA+ GGK +R FLV E A Sbjct: 1 MAAAADAQSRPFAQALKEAQSRITAHMEARLGGNDPLHAAMRYAITGGKMLRGFLVLESA 60 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L V+ AL AIECIH YSL+HDDLP MD+ +RRG+PTVH ++DE A++AG+ Sbjct: 61 RLHGVDDDAALEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDEAMAVLAGDS 120 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178 L T+AFE+++ PK + + + + G GM+ GQMLDI E +D Q+ Sbjct: 121 LQTFAFELLADPKIGPHALVLIRGL---AQSSGKDGMVSGQMLDIAAETATTPLDLDQIT 177 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +Q KTG L+ ++ +GA+MA A + LR + + LG+ FQ+ADD+LD E D K Sbjct: 178 RLQNRKTGCLISWSATAGAVMAGADE---APLRRYADALGLAFQIADDILDVEGDAAK 232 >gi|154251236|ref|YP_001412060.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1] gi|154155186|gb|ABS62403.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1] Length = 302 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 96/236 (40%), Positives = 144/236 (61%), Gaps = 8/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61 + L + +++ +LD LL + R+ A+RYA L GGK+ R FLV + Sbjct: 9 AQFEAGLATVAAKVEEMLDRLLPRVEGP-----EARIAEAMRYAALGGGKRFRPFLVAQS 63 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A+LF V ALR AA EC+H YSL+HDDLP MD+ +R G P VH Q+DE TA++AG+ Sbjct: 64 AALFGVASEAALRAAAAAECVHIYSLVHDDLPCMDDDDLRHGLPAVHRQFDEATAVLAGD 123 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFM 179 LLT AFEI++ P+T + +R +L+ L G GM+GGQ++D+ E + + Sbjct: 124 ALLTLAFEILADPETHERARVRIELVRRLAIASGAHGMVGGQIIDLTSEGRELDMGGITR 183 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 +Q++KTGAL+ F+CE+GAI+ AS + L + ++G+ +Q+ADD+LD E D Sbjct: 184 LQQLKTGALISFSCEAGAILGRASPDALHALHAYAHDMGLAYQIADDILDAEGDAA 239 >gi|332994564|gb|AEF04619.1| Geranylgeranyl pyrophosphate synthase [Alteromonas sp. SN2] Length = 324 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLTVLSARAMGIENADHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ S K +R +LS N +G + Q+++ Sbjct: 101 AVFGNQASVLVGDFLYTRSFQMMVSLK-----RMRVMDILSEATNQIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + F + KT L A + A++ +N + ++ +G++LG FQLADD+L Sbjct: 155 DASTTEARYFDVIYGKTARLFEAATQLAAVLTDQPENVEHAMQEYGKHLGTAFQLADDIL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYMAD 219 >gi|56551460|ref|YP_162299.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543034|gb|AAV89188.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 337 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 15/225 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + + + ++ ++ D + Q+ + + L+S+ GGK++R L+ C+ L Sbjct: 23 VASDMQAVNQVILDRM-QSEVPLIPELAGHLISS------GGKRMRPMLMLACSRLIGEP 75 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 ++ AAIE IH +L+HDD+ +D+ +RRGK T + + ++ G+ LL+ AF Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAF 133 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E++ + +R+ +LS I QG + + Q E DE + I KT L Sbjct: 134 EMMVESGS-----LRALEILSNAAAIITQGEVDQLVSQYQVE-TDEARYLSIIGAKTAVL 187 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +C A+MA S+++++ L +G+ LGI FQL DD +D D Sbjct: 188 FAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSD 232 >gi|296332988|ref|ZP_06875445.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674908|ref|YP_003866580.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii str. W23] gi|296149839|gb|EFG90731.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413152|gb|ADM38271.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis subsp. spizizenii str. W23] Length = 320 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++ + L A + L GGK+IR V + + V +E Sbjct: 15 DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 74 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+ +L + E+++ Sbjct: 75 MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAH 132 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 I SQ ++ + Q+ D + + K KT L+ +C+ GAI + Sbjct: 133 RILSQTIVEVCLGEI------EQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 186 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A + + L FG +G+ +Q+ DD+LD EE+L K Sbjct: 187 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 225 >gi|157828600|ref|YP_001494842.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933313|ref|YP_001650102.1| decaprenyl diphosphate synthase [Rickettsia rickettsii str. Iowa] gi|157801081|gb|ABV76334.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908400|gb|ABY72696.1| farnesyl pyrophosphate synthetase [Rickettsia rickettsii str. Iowa] Length = 355 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 11/220 (5%) Query: 15 RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70 +I L D + + + + + + ++ L+ + +Y L GGK+IR L A +F+ Sbjct: 34 KIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 93 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + +F++ Sbjct: 94 NHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 151 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 + + + I++ +L+ I +G + + + I + I K KT L Sbjct: 152 MVASGS-----IKAMHVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFG 206 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 AC G I+A + + ++ FG+ LG IFQ+ DDLLD Sbjct: 207 TACAVGTIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDY 246 >gi|300690362|ref|YP_003751357.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07] gi|299077422|emb|CBJ50048.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07] Length = 322 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + + E+ +D ++ L + + Q + ++SA GGK++R ++ A+ Sbjct: 6 LLAPVAEDMHAVDAVIRRRLGSEVA-LINQIGEYIISA------GGKRLRPVILLLMANA 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 59 LGYRGKHHHELAAVVEFIHTATLLHDDV--VDESELRRGRRTANAVFGNAASVLVGDFLY 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + AF+++ D++R +L+ N+ +G + Q+L++ D + E + + + K Sbjct: 117 SRAFQMMVQA-----DSMRVMQILADATNVISEGEVL-QLLNMHDPDVTEERYLQVIRYK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T L A + GA+++ A + +G +G FQ+ DDLLD Sbjct: 171 TAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 218 >gi|296132634|ref|YP_003639881.1| Trans-hexaprenyltranstransferase [Thermincola sp. JR] gi|296031212|gb|ADG81980.1| Trans-hexaprenyltranstransferase [Thermincola potens JR] Length = 323 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 17/236 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L +++ + ++ L + + ++ + LL+A GGK++R Sbjct: 5 ELFGEIRHDLVLVEKELKKIANLPEEKLLSETSGHLLNA------GGKRLRPAFALLAGK 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F + L + A+E IH +L+HDD+ +D RRG PTV ++ ++ G+ + Sbjct: 59 TFQYDLEKLLPLAVALELIHMATLVHDDV--VDASVTRRGIPTVKAKWGNQVSVYTGDFI 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + I+ I + + + ++ + Q+ D K Sbjct: 117 FGQSLIQIARCNNTKIAEILADVSVKMSEGEIV------QLRTTFDPKQSLRDYLFRIKR 170 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 KT L+ +CE GA+ A A +N LR +G LG+ FQ+ DD+LD E++L K Sbjct: 171 KTALLISASCELGALAAGAPENFIRALRWYGYYLGMAFQITDDILDLIAEEKELGK 226 >gi|163858538|ref|YP_001632836.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM 12804] gi|163262266|emb|CAP44569.1| putative octaprenyl-diphosphate synthase [Bordetella petrii] Length = 345 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 116/240 (48%), Gaps = 13/240 (5%) Query: 1 MNGGLPS---KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56 M L + +L + + + + + + + ++ D ++ + + + GGK++R Sbjct: 15 MTHQLAAVSLQLADIQRLVASDMGQVDALIRGRLHSRV-DLIVEVVEHLIAAGGKRLRPM 73 Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 LV + ++ IE IH +L+HDD+ +D +RRG+ T + + + A Sbjct: 74 LVILAGRACGGHGQGLHKLATIIEFIHTSTLLHDDV--VDESSMRRGRSTANAIWGSLPA 131 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176 ++ G+ L + +F+++ + ++ ++ T N +G + Q+L + + +DE Sbjct: 132 VLVGDFLYSRSFQLMVELGS-----MQIMQIIGKTTNQLAEGEIL-QLLHVHNPDVDEAA 185 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + K KT L + +GAI+A A + + R+ FGE+LG FQ+ DD+LD D + Sbjct: 186 YMQVIKHKTAVLFAASTTAGAILAGADRELQRRMEVFGEHLGYAFQITDDVLDYTADAEQ 245 >gi|91762255|ref|ZP_01264220.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002] gi|91718057|gb|EAS84707.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002] Length = 290 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 89/227 (39%), Positives = 135/227 (59%), Gaps = 6/227 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 +Q RI D L ++ Q L++A+ Y L GGKKIRS ++ + ++F + Sbjct: 1 MQNKLARIAK---DTNLFLKQFIKGQKRTELIAAMEYGLFPGGKKIRSKILIDIGAIFKI 57 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N+ T + +GAA+ECIH YSLIHDDLP MD+ IRRGK + HI++ E TA++AGN LLT A Sbjct: 58 NYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIRRGKISTHIKFGESTAVLAGNSLLTMA 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 FEI+ S +L + I+ L+ L+ G G+ GGQ LD+ E + ++++ ++ KT Sbjct: 118 FEILVSSSLKLNEKIKVDLIKKLSETSGHLGIAGGQYLDLSFEKKKVSKSKIIDMEIKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G L F C I+ S + + G N+G++FQ+ADDL+D + Sbjct: 178 GKLFSFCCTVPVIIKRKSNTQIKFFENIGSNIGLLFQIADDLIDFKG 224 >gi|328676037|gb|AEB28712.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida 3523] Length = 325 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 18/236 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66 + K I ++ + + + + L++ I + ++ GGK++R LV A N Sbjct: 2 QQLKDIQALIKEDIQNNNQFIIDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L + Sbjct: 62 YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ S DN++ +L+ N +G + Q+L+ ++ + E + KT Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEDYIKVIYCKTA 173 Query: 187 ALMCFACESGAIMA---HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 L ACE +++ + ++ +R +G LG FQ+ADD+LD D L K Sbjct: 174 KLFEAACELAGVISLDKQSYAKYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGK 229 >gi|254439584|ref|ZP_05053078.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] gi|198255030|gb|EDY79344.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307] Length = 332 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 16/231 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 L + L + ++ ++ D M ++H R+ + + GGK++R L Sbjct: 12 DRLAAALSDEMDAVNVLITD-------RMASKHAPRIPEVTAHLVGAGGKRLRPMLTLAA 64 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A + + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 65 AKMCGYSGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNTSSVLVGD 122 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L +F+++ + +R +L+ +G + Q+ D E I Sbjct: 123 YLFARSFQLMVETGS-----LRVLDILANASATIAEGEVL-QLTAASDLATTEAIYLQIV 176 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KT AL A E G ++A E L +G+ LGI FQ+ DDLLD Sbjct: 177 RGKTAALFSAAMEVGGVIAGQDAALVEALYDYGDALGIGFQIVDDLLDYAG 227 >gi|269960912|ref|ZP_06175282.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3] gi|269834352|gb|EEZ88441.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3] Length = 323 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + GAI+ A + + + +G+ LG FQL DD++ Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEEVEVAFQNYGKYLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|315038641|ref|YP_004032209.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112] gi|312276774|gb|ADQ59414.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112] Length = 289 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 15/221 (6%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVG 76 ++DD L + + + ++ + Y+++ GGK++R L + +R+ Sbjct: 14 VIDDYLARHLA--DEVDSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRIA 71 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 72 CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGSN 131 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCF 191 ++L+ +T +G GM+GGQ LDI D + ++ +KTG L+ Sbjct: 132 S------AELVKIITQAVGPNGMVGGQYLDIDSTNNESVAGDADFINKMEWLKTGCLIQA 185 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E A+ A A+ E+ +L + + G +Q+ DDL+D E Sbjct: 186 SVEMAAVYAKATDIEQVKLIDYAKAFGRSYQIYDDLVDVVE 226 >gi|332526525|ref|ZP_08402637.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2] gi|332110793|gb|EGJ10970.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2] Length = 313 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 15/224 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + +++D +L L + + Q ++SA GGK++R L+ + Sbjct: 1 MDAAMRQVDAVLRARLSSKVA-LIDQIASYIISA------GGKRMRPRLLLLFSEALGFR 53 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L + +F Sbjct: 54 GPERYELAAVVELIHTSTLLHDDV--VDESSLRRGRATANSMFGNAAAVLVGDFLYSRSF 111 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 +++ S K+ +R +L+ N+ +G + Q++++ D + + + + KT L Sbjct: 112 QMMVSVKS-----MRVLEVLAEATNVIAEGEVL-QLMNMHDADLAVDEYLRVIRFKTAKL 165 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + GA++A AS +E +G +LG FQL DDLLD E Sbjct: 166 FEASARLGAVLAGASAEVEEACADYGRSLGTAFQLVDDLLDYEG 209 >gi|256822892|ref|YP_003146855.1| polyprenyl synthetase [Kangiella koreensis DSM 16069] gi|256796431|gb|ACV27087.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069] Length = 323 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 9/193 (4%) Query: 44 RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 Y + GGK++R L+ A N + A IE IH +L+HDD+ +D +RR Sbjct: 38 HYIVAAGGKRLRPMLLLLAAKSLNYQGKFHPNLAAVIELIHTATLLHDDV--VDESDLRR 95 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G+ T + + +++ G+ L + +F+++ +R +LS T N G + Sbjct: 96 GRQTANAMFGNQASVLVGDYLYSRSFQMMVEVG-----EMRVMEVLSETTNEVAAGEVL- 149 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q++++ D +DE + + + KT L A + AI+A AS++ +E LR +G LG FQ Sbjct: 150 QLMNVNDPDVDEASYYQVIERKTAILFAAATQLAAILAGASKDVEEGLREYGLQLGNAFQ 209 Query: 223 LADDLLDCEEDLP 235 L DD LD D Sbjct: 210 LVDDALDYAADTE 222 >gi|242373821|ref|ZP_04819395.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1] gi|242348375|gb|EES39977.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1] Length = 288 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 131/224 (58%), Gaps = 5/224 (2%) Query: 17 DTILDDLLLQTASHMQTQH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74 + +++ + + +Q N L ++ Y+L GGK+IR L+ ++ ++ ++ Sbjct: 2 NNLIEQINTKLNQSIQNSSLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLKGDYDKGVQ 61 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E IH YSLIHDDLP+MD+ RRGK T H Y E AI+AG+ LLT AFE++S+ Sbjct: 62 SALALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSND 121 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192 + ++D ++ +L+ L+ G GM+GGQ LD+Q E +D T + I K KTGAL+ FA Sbjct: 122 EL-IEDKVKVKLVQRLSKASGHLGMVGGQTLDMQSENKTVDLTTLEAIHKAKTGALLTFA 180 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +A Q + L F ++LG++FQ+ DDLLD D K Sbjct: 181 VMAAVDIAQVDQETSDHLEKFSQHLGLMFQIKDDLLDVYGDEEK 224 >gi|104774286|ref|YP_619266.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514371|ref|YP_813277.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423367|emb|CAI98223.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093686|gb|ABJ58839.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126073|gb|ADY85403.1| Geranylgeranyl diphosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 287 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 13/231 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 + +E + I++D L + + + R + Y+++ GGK++R L Sbjct: 2 TTFKEFQAKYTPIINDFLEGQLA--KESDDPRFAEIMAYSVMAGGKRLRPLLFLATLDAL 59 Query: 66 NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 V ++ IE IH YSLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L Sbjct: 60 GVEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQ 119 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQ 181 + I+ + K L+ +T +G +GM+ GQ LDI +E E + ++ Sbjct: 120 PLGIQWIAQAEHNWK------LVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDHME 173 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTG L+ + + +A + ++ F ++ G +QL DDL+D E Sbjct: 174 WLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVE 224 >gi|241761105|ref|ZP_04759194.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374724|gb|EER64185.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 337 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 15/225 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + + + ++ ++ D + Q+ + + L+S+ GGK++R L+ C+ L Sbjct: 23 VASDMQAVNQVILDRM-QSEVPLIPELAGHLISS------GGKRMRPMLMLACSRLIGEP 75 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 ++ AAIE IH +L+HDD+ +D+ +RRGK T + + ++ G+ LL+ AF Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAF 133 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E++ + +R+ +LS I QG + + Q E DE + I KT L Sbjct: 134 EMMVESGS-----LRALEILSNAAAIITQGEVDQLVSQYQVE-TDEARYLSIIGAKTAVL 187 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +C A+MA S+++++ L +G+ LGI FQL DD +D D Sbjct: 188 FAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSD 232 >gi|110633068|ref|YP_673276.1| polyprenyl synthetase [Mesorhizobium sp. BNC1] gi|110284052|gb|ABG62111.1| Polyprenyl synthetase [Chelativorans sp. BNC1] Length = 338 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F + +++ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMITLAAAQMFGYSGEGHVKLATSVEFMHTATLLHDDV--VDESDMRRGKKTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF ++ + + + +LS +I +G + Q+ + Sbjct: 115 TIWGNQASVLVGDYLLGQAFRMMVDVGS-----LEALDVLSSAASIIAEGEVM-QLGVSK 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A AS+N++ LR FG NLG+ FQL DD L Sbjct: 169 NLETTEDEYLSVIKAKTAALFSAAAEVGPIIAEASRNDRAALRSFGINLGLAFQLVDDAL 228 Query: 229 DCEE---DLPK 236 D DL K Sbjct: 229 DYGGSSRDLGK 239 >gi|328552808|gb|AEB23300.1| heptaprenyl diphosphate synthase component II [Bacillus amyloliquefaciens TA208] Length = 320 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 12/219 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++ + L A + L GGK+IR V + + V +E Sbjct: 15 DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 74 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+ +L + E+++ D Sbjct: 75 MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLADSLEMMTRL-----D 127 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 ++ +LS T G + Q+ D + + K KT L+ +C+ GAI + Sbjct: 128 EPKAHRILSKTIVEVCLGEIE-QIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 186 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A + + L FG +G+ +Q+ DD+LD EE+L K Sbjct: 187 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 225 >gi|121610836|ref|YP_998643.1| dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2] gi|121555476|gb|ABM59625.1| Dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2] Length = 342 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 15/229 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 + + ++ + +D ++ LL + + + GGK++R L+ Sbjct: 28 ALVADDMREVDKVIGQRLLSNVPLVDWVARHIIAA-------GGKRLRPALLLMVCGALG 80 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 L + A +E IH +L+HDD+ +D +RRG+PT + + ++ G+ L T Sbjct: 81 YGGAHRLSLAAVVELIHTATLLHDDV--VDASTLRRGRPTANEIFGAPACVLVGDFLHTR 138 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 +F+ + N+R +L+ N+ +G + Q++++ D +DE + + KT Sbjct: 139 SFQTMVETG-----NMRVMEILAEATNVIAEGEVL-QLMNMHDATLDEAGYLRVIRSKTA 192 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L + GA++A +S + ++ +G+ LG FQ+ DD+LD + D Sbjct: 193 KLFEASARLGAVLARSSPDIEQACATYGQALGTAFQIIDDVLDYDGDSA 241 >gi|332289056|ref|YP_004419908.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179] gi|330431952|gb|AEC17011.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179] Length = 323 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 8/188 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A+ N + IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRIRPLIAVLVANALNYQGDRHITCATFIEFIHTATLLHDDV--VDESTLRRGKDTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++ + + ++S N+ G + Q+++ Sbjct: 101 AIFGNAASVLVGDFIYTRAFQLMARLGS-----LPVMQVMSDAVNVIAAGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A E A+++ A++ + + ++ +G LG FQL DD+L Sbjct: 155 DPDTTEQSYMQVIYSKTARLFEVAAECSALLSEATEQQVQAMKLYGRYLGTAFQLIDDVL 214 Query: 229 DCEEDLPK 236 D D+ K Sbjct: 215 DYCADVDK 222 >gi|294139556|ref|YP_003555534.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12] gi|293326025|dbj|BAJ00756.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12] Length = 323 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPLLTILAARAIDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ + ++ ML+ N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELGS-----MKVLEMLADATNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A + + L +G+ LG FQL DDLL Sbjct: 155 DPDTSEENYMRVIYCKTAKLFEAATRLAGVLADSPIEIQTALADYGKYLGTAFQLTDDLL 214 Query: 229 DC---EEDLPK 236 D E+L K Sbjct: 215 DYTANTEELGK 225 >gi|242278215|ref|YP_002990344.1| polyprenyl synthetase [Desulfovibrio salexigens DSM 2638] gi|242121109|gb|ACS78805.1| Polyprenyl synthetase [Desulfovibrio salexigens DSM 2638] Length = 296 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 127/226 (56%), Gaps = 15/226 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + KL ++ ++ L + L + LL ++ Y+L+ GGK++R LV A Sbjct: 3 VKEKLAVHAADVEKYLGECLK------GMGIPENLLESMEYSLMAGGKRLRPVLVLVWAQ 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + V + A++E IH YSLIHDDLP+MD+ +RRGKP+ H ++DE TAI+AG+GL Sbjct: 57 MLGVKKEAVMPFAASLEMIHTYSLIHDDLPAMDDDDLRRGKPSNHKKFDEATAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMI 180 LT AF ++ + + + + G GM+GGQ++D+ D ++ ++ Sbjct: 117 LTEAFGFMAKADA--PAEYVVEAISLMAKSAGSPGMVGGQVVDMSYTGRDGVTLDELKVM 174 Query: 181 QKMKTGALMCFACESGAIM---AHASQNEKERLRCFGENLGIIFQL 223 MKTGAL+ AC+SGAI+ A AS+++ R +G +G+ FQ+ Sbjct: 175 HSMKTGALILSACKSGAILAKGAGASEDDVRRAEEYGRLIGVAFQI 220 >gi|2829443|sp|P55785|HEPS2_BACST RecName: Full=Heptaprenyl diphosphate synthase component 2; Short=HEPPP synthase subunit 2 gi|1731683|dbj|BAA08725.1| component II of heptaprenyl diphosphate synthase [Geobacillus stearothermophilus] Length = 320 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 8/225 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 KL+ + L + + +Q+++ +A+ GGK+IR V A Sbjct: 2 KLKAMYSFLSDDLAAVEEELERAVQSEYGPLGEAALHLLQAGGKRIRPVFVLLAARFGQY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + V A+E IH SL+HDD+ +D+ +RRG+PT+ ++ A+ G+ L + Sbjct: 62 DLERMKHVAVALELIHMASLVHDDV--IDDADLRRGRPTIKAKWSNRFAMYTGDYLFARS 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E ++ + ++ ++ + Q+ D + KT Sbjct: 120 LERMAELGNPRAHQVLAKTIVEVCRGEI------EQIKDKYRFDQPLRTYLRRIRRKTAL 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ +C+ GA+ A A + +RL FG +G+ FQ+ DD+LD Sbjct: 174 LIAASCQLGALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTG 218 >gi|73542643|ref|YP_297163.1| trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134] gi|72120056|gb|AAZ62319.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134] Length = 325 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 110/229 (48%), Gaps = 15/229 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L + + + + +D ++ L ++ Q + ++SA GGK++R ++ A Sbjct: 8 ALLAPVAADMRAVDAVIRQRLSSEVPLIE-QIGEYIISA------GGKRLRPVILLMSAR 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F + + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 61 AFGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRETANAVFGNAASVLVGDFL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + AF+++ + +R +LS N+ +G + Q+L++ D + + + + Sbjct: 119 YSRAFQMMVDAGS-----MRIMEILSNATNVIAEGEVL-QLLNMHDPDVTIERYLQVIRY 172 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L + + GA++A A +E +G +G FQL DD+LD Sbjct: 173 KTAKLFEASAQLGAVLAGADAAMEEAAAEYGRRIGTAFQLIDDMLDYTA 221 >gi|207723747|ref|YP_002254145.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum MolK2] gi|206588951|emb|CAQ35913.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum MolK2] Length = 299 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 77/236 (32%), Positives = 122/236 (51%), Gaps = 9/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 + R ++ L+ L ++ RL +A+RYA LG GK++R LV Sbjct: 2 SDFAQWMASIVARTESALERALP-----GESVAPQRLHAAMRYATLGAGKRVRPLLVHAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +L + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+ Sbjct: 57 GALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF +++ + R+ L+ L G GM GGQ +D+Q + + + Sbjct: 117 ALQTQAFVVLAELGA-VSPVTRAALVGELARASGSLGMAGGQAIDLQSVGVALSQDALET 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +MKTGAL+ + GA+ A + E++ + +G+ FQ+ DD+LD D Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDTYAGAVGLAFQVVDDILDVTADTA 231 >gi|332678210|gb|AEE87339.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Francisella cf. novicida Fx1] Length = 325 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 18/236 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66 + K I ++ + + + + L++ I + ++ GGK++R LV A N Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L + Sbjct: 62 YSGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ S DN++ +L+ N +G + Q+L+ ++ + E + + KT Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173 Query: 187 ALMCFACESGAIMAHASQNEK---ERLRCFGENLGIIFQLADDLLDCEED---LPK 236 L ACE +++ QN + +R +G LG FQ+ADD+LD D L K Sbjct: 174 KLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGK 229 >gi|260752929|ref|YP_003225822.1| trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552292|gb|ACV75238.1| Trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 337 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 15/225 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + + + ++ ++ D + Q+ + + L+S+ GGK++R L+ C+ L Sbjct: 23 VASDMQAVNQVILDRM-QSEVPLIPELAGHLISS------GGKRMRPMLMLACSRLIGEP 75 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 ++ AAIE IH +L+HDD+ +D+ +RRGK T + + ++ G+ LL+ AF Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAF 133 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E++ + +R+ +LS I QG + + Q E DE + I KT L Sbjct: 134 EMMVESGS-----LRALEILSNAAAIITQGEVDQLVSQYQVE-TDEARYLSIIGAKTAVL 187 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 +C A+MA S+++++ L +G+ LGI FQL DD +D D Sbjct: 188 FAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSD 232 >gi|237752529|ref|ZP_04583009.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis ATCC BAA-430] gi|229376018|gb|EEO26109.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis ATCC BAA-430] Length = 287 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 5/213 (2%) Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIEC 81 L +++ + H + + L GGK+ R L+ + + V + A A+E Sbjct: 14 YLKESSPKIPNFHPNYENALWEIVLNGGKRFRPKLLLSIVASYKVENVKLAFAPALALEI 73 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 +H YSLIHDDLP+MDN RRG T+H +YDE AI+AG+GL T AF +I++ K + K Sbjct: 74 LHTYSLIHDDLPAMDNAPFRRGCVTLHKKYDEALAILAGDGLNTQAFYLIATSKLKPKIK 133 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIM 199 I+ LS N G+ GM+ GQ LD E + Q+ +I KT L+ + E GA++ Sbjct: 134 IKLIESLSY--NGGIYGMVLGQALDCHFEGEKLPLEQLRVIHLNKTAKLIAASFEMGAMI 191 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A + + L G +LG+ FQ+ DD++D + Sbjct: 192 AECDKKTRRSLYQLGLDLGLFFQIRDDVIDSTQ 224 >gi|227893300|ref|ZP_04011105.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047] gi|227864880|gb|EEJ72301.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047] Length = 289 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 15/221 (6%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVG 76 ++DD L + + + ++ + Y+++ GGK++R L ++ +R+ Sbjct: 14 VIDDYLAKHLA--DEVEDPKISQIMAYSVMAGGKRLRPLLFLATLNVLGKKIEEPEIRIA 71 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 72 CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSN 131 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCF 191 ++L +T +G GM+GGQ LDI D + ++ +KTG L+ Sbjct: 132 S------AKLAAMITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTGCLIQA 185 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E A+ A A+ E+ +L F + G +Q+ DDL+D E Sbjct: 186 SVEMAAVYARATDIEQVKLVDFAKAFGRSYQIYDDLVDVVE 226 >gi|260893125|ref|YP_003239222.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4] gi|260865266|gb|ACX52372.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4] Length = 320 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 17/227 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L+E+ R++ + ++ L A + L GGK++R L CA Sbjct: 8 LREDLARVEEEIRRVVA--------GAPPPLREAALHLLAAGGKRLRPALALLCAHFGRY 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + L + AA+E IH +L+HDD+ +D +RRG PTVH ++ TAI G+ L A Sbjct: 60 SLERVLPLAAAVELIHMATLVHDDV--IDGAEMRRGIPTVHARWGPETAIKVGDVLFAQA 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E++SS + + LS+ Q + + F + KT Sbjct: 118 IELVSSYEDSAVARKLAATCLSMCTGE------FAQERESYSPQQSVWRYFRRIRRKTAL 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 + ACE GA + A + LR +G LG+ FQ+ DD+LD + Sbjct: 172 FIGAACELGARVCEAPLVVCQALRQYGLALGMAFQVVDDVLDLVAEE 218 >gi|297537809|ref|YP_003673578.1| polyprenyl synthetase [Methylotenera sp. 301] gi|297257156|gb|ADI29001.1| Polyprenyl synthetase [Methylotenera sp. 301] Length = 304 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 78/233 (33%), Positives = 125/233 (53%), Gaps = 10/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 + RI+ +L++ L T RL SA+RY AL GGK++R+ L + Sbjct: 14 DFSAWAAAKQARIEDVLNNALPSTN-----VAPQRLHSAMRYSALEGGKRVRALLCYAAS 68 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 L + A A+E IH YSL+HDD+P MD+ +RRGKP+ H QYD+ TA++ G+ Sbjct: 69 ELCKTDAKVADAAACAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDA 128 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180 L + AFE++S + N + ++ L G GM GGQ +D+ + + +T + + Sbjct: 129 LQSLAFEVLSQANLCTQTNHQVSMLNILAKASGSTGMAGGQAIDLASVGKMLSQTDLEQM 188 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 ++KTGAL+ A G I + + + + +N+G+ FQ+ DD+LD E D Sbjct: 189 HQLKTGALIQAAVLLGGI--NGEIEKTAAISTYAKNIGLAFQVIDDILDVEAD 239 >gi|254374334|ref|ZP_04989816.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548] gi|151572054|gb|EDN37708.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548] Length = 325 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 18/236 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66 + K I ++ + + + + L++ I + ++ GGK++R LV A N Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L + Sbjct: 62 YSGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ S DN++ +L+ N +G + Q+L+ ++ + E + + KT Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173 Query: 187 ALMCFACESGAIMAHASQNEK---ERLRCFGENLGIIFQLADDLLDCEED---LPK 236 L ACE +++ QN + +R +G LG FQ+ADD+LD D L K Sbjct: 174 KLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGK 229 >gi|144900826|emb|CAM77690.1| geranyltranstransferase [Magnetospirillum gryphiswaldense MSR-1] Length = 296 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 141/214 (65%), Gaps = 6/214 (2%) Query: 30 HMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88 + R+ A+RY AL GGK++R FL + ASLFNV+ ALRVG A+E +HCYSLI Sbjct: 25 PVPDGPERRVHDAMRYSALDGGKRLRPFLTVQAASLFNVSPAAALRVGCALEMVHCYSLI 84 Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148 HDDLP MD+ +RRG+PT H Q+DE TA++AG+ L + AFE++++ T +R +L+ Sbjct: 85 HDDLPCMDDDDLRRGRPTCHRQFDEATALLAGDALQSRAFEVLAAESTHPDPAVRCELVW 144 Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206 L H G GM+GGQM+D+Q +D + +Q+MKTG L+ FACE+GAI+ A + Sbjct: 145 QLAHAAGGMGMVGGQMVDLQAAQLTMDMADITRLQQMKTGRLIGFACEAGAILGKAPSSL 204 Query: 207 KERLRCFGENLGIIFQLADDLLDCEED---LPKK 237 + L+ + +LG+ FQ+ADDLLD + D + KK Sbjct: 205 RLALKNYAHDLGLAFQIADDLLDVQGDEMQVGKK 238 >gi|300811648|ref|ZP_07092124.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497349|gb|EFK32395.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 287 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 13/231 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 + +E + I++D L + + + R + Y+++ GGK++R L Sbjct: 2 TTFKEFQAKYTPIINDFLEGQLA--KESDDPRFAEIMAYSVMAGGKRLRPLLFLATLDAL 59 Query: 66 NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 V ++ IE IH YSLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L Sbjct: 60 GVEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQ 119 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQ 181 + I+ + K L+ +T +G +GM+ GQ LDI +E E + ++ Sbjct: 120 PLGIQWIAQAEHNWK------LVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDHME 173 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTG L+ + + +A + ++ F ++ G +QL DDL+D E Sbjct: 174 WLKTGCLILASVQMATALAACPNQQAQKYLAFAKHFGRSYQLYDDLVDIVE 224 >gi|262375796|ref|ZP_06069028.1| geranyltranstransferase [Acinetobacter lwoffii SH145] gi|262309399|gb|EEY90530.1| geranyltranstransferase [Acinetobacter lwoffii SH145] Length = 302 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 80/205 (39%), Positives = 115/205 (56%), Gaps = 7/205 (3%) Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLP 93 + L SA+ +A+ LGGK++R L A+L N N R AIE IHCYSL HDDLP Sbjct: 33 PEPLRSAVHHAVMLGGKRVRPALCYATAALKPNQNSAAVRRAAVAIEFIHCYSLAHDDLP 92 Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH- 152 MDN +RRG+PT H+ Y E TA++AG+ L + AFEI+ S + + ++L Sbjct: 93 CMDNDLLRRGQPTCHVAYGEDTALLAGDILQSMAFEILGSRLFDQGPAVEASIVLKQMQI 152 Query: 153 -NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKE 208 M+ GQ+LD+Q E ID+ + I + KTGAL+ A A+ + + Sbjct: 153 LATASSKMVNGQVLDLQSEGKKIDQQALETIHRNKTGALISAAIMMAAVTIFDGTDLAIP 212 Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233 +LR FG+ +G+ FQ+ DD+LD D Sbjct: 213 KLREFGQAIGLAFQVQDDILDIISD 237 >gi|5712726|gb|AAD47627.1| octylprenyl diphosphate synthase-like protein [Pseudomonas sp. BG33R] Length = 322 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRETA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ + + +FE++ + + +LS I +G + Q+ + Sbjct: 100 NAMWGNAPSVLVGDFMYSRSFEMMVELGS-----MPVMKILSQATRIIAEGEVL-QLSKV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT + S A + A+ + E LR FG+NLG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMFFEASTHSAAALCGATAEQAEALRTFGDNLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD + D Sbjct: 214 LDYKGDAE 221 >gi|261417952|ref|YP_003251634.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC61] gi|319767236|ref|YP_004132737.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC52] gi|261374409|gb|ACX77152.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC61] gi|317112102|gb|ADU94594.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y412MC52] Length = 320 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 8/225 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 KL+ + L + + +++++ +A+ GGK+IR V A + Sbjct: 2 KLKAMYSFLSDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + V A+E IH SL+HDD+ +D+ +RRG+PT+ ++ A+ G+ L + Sbjct: 62 DFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIKARWSNRFAMYTGDYLFARS 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E ++ + + ++ ++ + H Q+ D + KT Sbjct: 120 LERMAELDSPRAHQVLAKTIVEVCHGEI------EQIKDKYRFDQPLRTYLRRIRRKTAL 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ +C+ GA+ A A + RL FG +G+ FQ+ DD+LD Sbjct: 174 LIAASCQLGALAAGAPEAVANRLYWFGHYVGMSFQITDDILDFTG 218 >gi|325685896|gb|EGD27962.1| farnesyltranstransferase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 296 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 13/231 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 + +E + I++D L + + + R + Y+++ GGK++R L Sbjct: 11 TTFKEFQAKYTPIINDFLEGQLA--KESDDSRFAEIMAYSVMAGGKRLRPLLFLATLDAL 68 Query: 66 NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 V ++ IE IH YSLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L Sbjct: 69 GVEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQ 128 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQ 181 + I+ + K L+ +T +G +GM+ GQ LDI +E E + ++ Sbjct: 129 PLGIQWIAQAEHNWK------LIEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDHME 182 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTG L+ + + +A + ++ F ++ G +QL DDL+D E Sbjct: 183 WLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVE 233 >gi|90411954|ref|ZP_01219962.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum 3TCK] gi|90327212|gb|EAS43584.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum 3TCK] Length = 323 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 9/189 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + A +E IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPMLVVLAARALGYQGDKHITAAAFVEFIHTATLLHDDV--VDESDMRRGKETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S ++ ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDVMSEATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+ +S + L+ +G LG FQL DD+L Sbjct: 155 DPNTTEDNYMQVIYSKTARLFEAATQISAIITESSTEVEVALQDYGRYLGTAFQLIDDVL 214 Query: 229 DCEEDLPKK 237 D D K+ Sbjct: 215 DYVAD-GKE 222 >gi|314933695|ref|ZP_07841060.1| geranyltranstransferase [Staphylococcus caprae C87] gi|313653845|gb|EFS17602.1| geranyltranstransferase [Staphylococcus caprae C87] Length = 288 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 86/223 (38%), Positives = 129/223 (57%), Gaps = 5/223 (2%) Query: 18 TILDDLLLQTASHMQTQH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 +++++ + H N L ++ Y+L GGK+IR L+ ++ N ++ L+ Sbjct: 3 NLIEEVNTNLKQAIPESHLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLNEDYHKGLQS 62 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E IH YSLIHDDLP+MD+ RRGK T H Y E AI+AG+ LLT AFE++S+ Sbjct: 63 ALALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDD 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFAC 193 ++DN++ +++ L+ G GM+GGQ LD+Q E +D + I K KTGAL+ FA Sbjct: 123 L-IEDNVKVKVLQRLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIHKAKTGALLTFAV 181 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +A Q L F E+LG++FQ+ DDLLD D K Sbjct: 182 MAAVDIAQVDQKTSHNLNEFSEHLGLMFQIKDDLLDVYGDEKK 224 >gi|300703492|ref|YP_003745094.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum CFBP2957] gi|299071155|emb|CBJ42469.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum CFBP2957] Length = 299 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 77/236 (32%), Positives = 122/236 (51%), Gaps = 9/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 + R ++ L+ L ++ RL +A+RYA LG GK++R LV Sbjct: 2 SDFAQWMASVVARTESALERALP-----GESVAPQRLHAAMRYATLGAGKRVRPLLVHAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +L + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+ Sbjct: 57 GALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF +++ + R+ L+ L G GM GGQ +D+Q + + + Sbjct: 117 ALQTQAFVVLAELGA-VSSVTRAALVGELARASGSLGMAGGQAIDLQSVGVALSQDALET 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +MKTGAL+ + GA+ A + E++ + +G+ FQ+ DD+LD D Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNATALEQVDAYAGAVGLAFQVVDDILDVTADTA 231 >gi|291279049|ref|YP_003495884.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1] gi|290753751|dbj|BAI80128.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1] Length = 327 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 17/229 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 L+++ K ++ D+LL S +Q + Y GGK++R + + L Sbjct: 13 LKDDIKSVE---DELLKNLDSEVQMVN-----EVASYVFKSGGKRLRPVFLILSSKLSGY 64 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ + +E IH +L+HDD+ +D RRGK + + ++ G+ L + A Sbjct: 65 EGNRSIVISGVVEYIHTATLLHDDV--IDGAMYRRGKKAANRVFGNDITVLCGDFLYSRA 122 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F + + Q++L+ +G + Q++ + + I KT Sbjct: 123 FVNLVKDG-----DPEVQMILANAAKTMSEGEVF-QLVKTANFDLTMEDYLKIIFSKTAI 176 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L CE GA+++ + ++++E LR +G +G+ FQ++DD+LD D K Sbjct: 177 LFSSCCEIGAVLSKSDKDKRENLREYGRLIGLAFQMSDDILDYLGDENK 225 >gi|73662585|ref|YP_301366.1| heptaprenyl diphosphate syntase component II [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495100|dbj|BAE18421.1| putative heptaprenyl diphosphate syntase component II [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 317 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 19/225 (8%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT 71 K+I+ L+ + + +D++L A + L GGK++R V + + Sbjct: 11 KKIEKRLEQSI---------KSHDKVLEAASHHLFSSGGKRVRPAFVILSSQFGKEMNED 61 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 RV +E IH +L+HDD+ +D RRG T+ ++D+ TAI+ GN LL E I Sbjct: 62 VYRVAVTLELIHMATLVHDDV--IDKSDKRRGSLTISKKWDQNTAILTGNFLLARGLEHI 119 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 S+ + R ++S G L Q D + T KT L+ Sbjct: 120 SNIEAN-----RVHAVISRAIVEVCMGELY-QFQDQFNGHQTITNYLRRINRKTALLIQL 173 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + E GAI + A L+ G +G+ FQ+ DD+LD K Sbjct: 174 STEVGAITSGADAKTVHNLKMIGHYIGMSFQIVDDILDFTSTEKK 218 >gi|304570553|ref|YP_266034.2| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062] Length = 290 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 88/227 (38%), Positives = 135/227 (59%), Gaps = 6/227 (2%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 +Q RI D L ++ Q L++A+ Y L GGKKIRS ++ + ++F + Sbjct: 1 MQNKLARIAK---DTNLFLKQFIKGQKRTELIAAMEYGLFPGGKKIRSKILIDIGAIFKI 57 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N+ T + +GAA+ECIH YSLIHDDLP MD+ IRRGK + HI++ E TA++AGN LLT A Sbjct: 58 NYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIRRGKISTHIKFGESTAVLAGNSLLTMA 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185 FEI+ S ++ + I+ L+ L+ G G+ GGQ LD+ E + ++++ ++ KT Sbjct: 118 FEILVSSSLKINEKIKVDLVKKLSETSGHLGIAGGQYLDLSFEKKKVSKSKIIDMEIKKT 177 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G L F C I+ S + + G N+G++FQ+ADDL+D + Sbjct: 178 GKLFSFCCAVPVIIKRKSNTQIKFFENIGSNIGLLFQIADDLIDFKG 224 >gi|303258213|ref|ZP_07344220.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47] gi|302858966|gb|EFL82050.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47] Length = 326 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 60/227 (26%), Positives = 117/227 (51%), Gaps = 17/227 (7%) Query: 7 SKLQENSKRID-TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 + + E+ +D ++DDL Q+ + + +D +++A GGK++R ++ A Sbjct: 13 APISEDLLAVDREVIDDL--QSDIPLIKKISDYIVTA------GGKRMRPIVLMLIARAL 64 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + + IE +H SL+HDD+ +D +RRGKPT ++ AI+ G+ + + Sbjct: 65 GYQGKEHIFLATMIEYVHTASLLHDDV--VDESDLRRGKPTAGFKWGNAAAILTGDFMYS 122 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 AF+++ + N+R +++ N +G + Q+L+I D +DE + F + + KT Sbjct: 123 RAFQLMVRTQ-----NLRICEIVAGAVNRVSEGEVI-QLLNIHDTTLDEARYFDVIERKT 176 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G L A +++A AS+ ++++ + LG FQ+ DD+LD Sbjct: 177 GVLFEAAARMASVVAGASKEVEDKMAEYALCLGRAFQIIDDVLDYTG 223 >gi|260548951|ref|ZP_05823173.1| polyprenyl synthetase [Acinetobacter sp. RUH2624] gi|260557259|ref|ZP_05829475.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606] gi|260408119|gb|EEX01590.1| polyprenyl synthetase [Acinetobacter sp. RUH2624] gi|260409365|gb|EEX02667.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606] Length = 303 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66 L++ +RI DLL A+ + L SA+ +A+ LGGK++R L ASL N Sbjct: 12 LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L + Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125 Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 AFE++ S + + ++L M+ GQ+LD+Q E I + ++ I Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185 Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA+ + + +LR +G+ +G+ FQ+ DD+LD Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITS 237 >gi|121602666|ref|YP_988702.1| polyprenyl synthetase [Bartonella bacilliformis KC583] gi|120614843|gb|ABM45444.1| polyprenyl synthetase [Bartonella bacilliformis KC583] Length = 338 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMITLAAAHMFGYQGDEHIKLATAVEFMHTATLLHDDV--VDESNLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+I+ ++ + + +LS + +G + Q+ Sbjct: 115 MIWGNQASVLVGDFLLGQAFKIMVDARS-----MEALAILSNAAAVIAEGEVM-QLAAAN 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + D + I KT AL A E G I+A E+ LR +G +LG+ FQL DD L Sbjct: 169 NIENDISNYLKIINAKTAALFSAAAEVGPIIAGYGCEERSALRKYGTSLGLAFQLIDDAL 228 Query: 229 DCEED---LPK 236 D D L K Sbjct: 229 DYSGDAQHLGK 239 >gi|319778972|ref|YP_004129885.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9] gi|317108996|gb|ADU91742.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9] Length = 321 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 110/236 (46%), Gaps = 18/236 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 + + E+ +D ++ L ++T + ++SA GGK+IR ++ + Sbjct: 5 AIFQPISEDMSAVDKVIRSRLNSEVVLIRTIG-EYIISA------GGKRIRPAMLLMMSK 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + A IE IH +L+HDD+ +D +RRG T + + +++ G+ L Sbjct: 58 ALGYEGSLHHLMAAVIEFIHTSTLLHDDV--VDESDMRRGSATANAVFGNAASVLVGDYL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + +FE++ D++R ++S + +G + Q+L++ D +D + + K Sbjct: 116 YSRSFEMMVEA-----DSMRIMQIMSEATTVIAEGEVL-QLLNVHDPNVDFDRYMDVIKS 169 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KT L A A++A A +++ +G ++G FQ+ DD+LD DL K Sbjct: 170 KTAKLFEAATRVAAVLAGADDAVEQKAALYGTHVGTAFQVIDDVLDYSGSAEDLGK 225 >gi|238854801|ref|ZP_04645131.1| geranyltranstransferase [Lactobacillus jensenii 269-3] gi|260664032|ref|ZP_05864885.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii SJ-7A-US] gi|282933879|ref|ZP_06339227.1| geranyltranstransferase [Lactobacillus jensenii 208-1] gi|238832591|gb|EEQ24898.1| geranyltranstransferase [Lactobacillus jensenii 269-3] gi|260561918|gb|EEX27887.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii SJ-7A-US] gi|281301968|gb|EFA94222.1| geranyltranstransferase [Lactobacillus jensenii 208-1] Length = 288 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 76/232 (32%), Positives = 119/232 (51%), Gaps = 18/232 (7%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDR-LLSAIRYALL-GGKKIRSFLVTECASL 64 ++ K+ I+D L Q H+ ++ D+ + Y+++ GGK++R L Sbjct: 2 TEFTNFYKKYQPIIDHYLEQ---HLASEIEDKKFSQIMAYSVMAGGKRLRPLLFLATLIS 58 Query: 65 FNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + +RV IE IH YSLIHDDLP+MDN RRG T H ++ E AI+AG+ L Sbjct: 59 LGKEINEKEIRVACGIELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAILAGDAL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ--VF 178 L E I+S K ++++ + + IG GM GGQ LDI +E + E + Sbjct: 119 LPMGLEWIASAKN-------AEMVAVMANAIGPNGMAGGQYLDIDSTNNEAVKEDNNFIN 171 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++ +KTG L+ + E I A+A+ ++ L F N G +Q+ DDL+D Sbjct: 172 RMEWLKTGCLIKASVELATIYANANDLLRKNLVDFSANFGRAYQIYDDLVDV 223 >gi|194016766|ref|ZP_03055379.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus ATCC 7061] gi|194011372|gb|EDW20941.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus ATCC 7061] Length = 320 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 13/233 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 KL+ ++ +D + + +++ + L A + L GGK+IR V + Sbjct: 2 KLKAMISFLNHDIDIIEKELEQTVRSDYA-LLSEAGLHLLQAGGKRIRPVFVLLSGMFGD 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + V A+E IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+ + Sbjct: 61 YDINKIKYVAVALELIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMFAR 118 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 + E ++ + I S++++ L Q+ D + + K KT Sbjct: 119 SLEYMTKINHPMAHEILSKMVVELCLGEI------EQVKDKYNMDQNLRTYLRRIKRKTA 172 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 L+ +C+ GAI A + + L FG +G+ +Q+ DD+LD EE+L K Sbjct: 173 LLIAGSCQLGAIAAGTDEKTHKALYWFGYYVGMSYQIIDDVLDFTSTEEELGK 225 >gi|187931635|ref|YP_001891619.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712544|gb|ACD30841.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] Length = 325 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 18/236 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66 + K I ++ + + + + L++ I + ++ GGK++R LV A N Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L + Sbjct: 62 YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ S DN++ +L+ N +G + Q+L+ ++ + E + + KT Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173 Query: 187 ALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEED---LPK 236 L ACE +++ Q+ + R++ +G LG FQ+ADD+LD D L K Sbjct: 174 KLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGK 229 >gi|218960663|ref|YP_001740438.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase) (Farnesyltranstransferase) [Candidatus Cloacamonas acidaminovorans] gi|167729320|emb|CAO80231.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase) (Farnesyltranstransferase) [Candidatus Cloacamonas acidaminovorans] Length = 296 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 84/238 (35%), Positives = 133/238 (55%), Gaps = 13/238 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L ++E + ++ ILD L + ++ L A+RY++ GGK++R +L Sbjct: 7 LKKDMKEKQELVNIILDRFLPRKD-----EYPKDLHKAMRYSVFAGGKRLRPYLTMTAFE 61 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +FN N V A IE IH YSLIHDDLP +DN RRGK + H + E A++AG+ L Sbjct: 62 MFNSNIELITPVAAGIEMIHTYSLIHDDLPDIDNDDFRRGKKSCHTIFGEGVALLAGDAL 121 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 L AFE+I+ +L +R Q + L +G++G++ GQM+DI+ E +D+ + I Sbjct: 122 LLSAFELIT--LAELDAKLRVQFVHELAKEVGIKGLIAGQMVDIESEGKKVDKKTLHYIH 179 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + KT L+ + GA+ A + E + L +G+ +G++FQ+ DDLLD E +L K Sbjct: 180 ENKTARLINLSLRFGALAGEAKEEELKILDEYGKLIGLVFQIVDDLLDIEGTQEELGK 237 >gi|117617957|ref|YP_855472.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559364|gb|ABK36312.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 323 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 8/183 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L A L++ A IE IH +L+HDD+ +D +RRG+ T Sbjct: 42 AGGKRMRPMLTVMAARALGYEGEDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +F+++S N+R +LS N +G + Q+++ Sbjct: 100 NALFGNAASVLVGDYLYSRSFQMMSELS-----NLRVMEILSDATNTIAEGEVL-QLMNC 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E + KT L A A++ H + ++ + +G+ LG FQ+ DD+ Sbjct: 154 NDPDTTEESYMTVIYCKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDV 213 Query: 228 LDC 230 +D Sbjct: 214 MDY 216 >gi|260654971|ref|ZP_05860459.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1] gi|260630286|gb|EEX48480.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1] Length = 280 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 100/207 (48%), Gaps = 6/207 (2%) Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90 RL A+ Y+L GGK+IR L E A L V + A+E +H SLIHD Sbjct: 9 PDNVPPRLWEAMCYSLEAGGKRIRPVLCQEGARLAGVKAEDTFPMALALEMVHTASLIHD 68 Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP--KTQLKDNIRSQLML 148 DLP MDN +RRGKPT H + E A++AG+ LL + F+ +++ + M Sbjct: 69 DLPCMDNDSLRRGKPTNHSVFGESLALLAGDALLCFGFQTALEGLKARKIETKRVVRAME 128 Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQN 205 +G QGM GGQ LD + D V + KT AL+ + G + Sbjct: 129 LFASALGPQGMCGGQTLDTDLQSRASCDLPFVQSMASGKTMALIRCSVLCGLCLGERGDA 188 Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232 ERL +G LG+ FQ+ADDLLD Sbjct: 189 LTERLDEYGRRLGLAFQIADDLLDATA 215 >gi|256851326|ref|ZP_05556715.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii 27-2-CHN] gi|260660750|ref|ZP_05861665.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii 115-3-CHN] gi|282933229|ref|ZP_06338616.1| geranyltranstransferase [Lactobacillus jensenii 208-1] gi|297206196|ref|ZP_06923591.1| geranyltranstransferase [Lactobacillus jensenii JV-V16] gi|256616388|gb|EEU21576.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii 27-2-CHN] gi|260548472|gb|EEX24447.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii 115-3-CHN] gi|281302733|gb|EFA94948.1| geranyltranstransferase [Lactobacillus jensenii 208-1] gi|297149322|gb|EFH29620.1| geranyltranstransferase [Lactobacillus jensenii JV-V16] Length = 288 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 72/236 (30%), Positives = 111/236 (47%), Gaps = 20/236 (8%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 + Q+ ID L+ L + + + Y+++ GGK++R L Sbjct: 3 DFTNFYQKYQPIIDHYLEQHLSSEI------EDKKFSQIMAYSVMAGGKRLRPLLFLATL 56 Query: 63 SLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +RV IE IH YSLIHDDLP+MDN RRG T H ++ E AI+AG+ Sbjct: 57 ISLGKEITEKEIRVACGIELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ----- 176 LL E I+S + ++++ + + IG GM GGQ LDI D + Sbjct: 117 ALLPMGLEWIASAEN-------AEMVAVMANAIGPNGMAGGQYLDIDSTNNDAVKEDNNF 169 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + ++ +KTG L+ + E I A A +++L F N G +Q+ DDL+D + Sbjct: 170 INRMEWLKTGCLIKASVEIATIYAKADDLSRKKLVDFSANFGRAYQIYDDLVDVVQ 225 >gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya] Length = 214 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%) Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E +H SLIHDDLP MDN +RRGKPT H + E A++AG+ LL+++FE ++ + Sbjct: 1 EMMHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLAVATVGVD 60 Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESG 196 + + + L +IG +G++ GQ++DI E + + + I KT AL+ A G Sbjct: 61 PSRIVRAIKELAKSIGTEGLVAGQVVDICSEGMTDVGLEHLEFIHVHKTAALLEAAVVLG 120 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 AI+ + E E+LR F +G++FQ+ DD+LD ++L K Sbjct: 121 AILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGK 163 >gi|146329907|ref|YP_001209557.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A] gi|146233377|gb|ABQ14355.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A] Length = 280 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 78/228 (34%), Positives = 118/228 (51%), Gaps = 18/228 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67 L R++ L+ L S L A+RY+ L GK++R+ L+ A F++ Sbjct: 3 LNNYRDRVEHALERALPHDES--------LLTKAMRYSTLNAGKRLRAALIYAVAEDFSL 54 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A+ECIH YSLIHDDLP+MDN +RRGK + H +DE TAI+AG+ L T A Sbjct: 55 PLSLVDNAACALECIHAYSLIHDDLPAMDNDDLRRGKASCHKAFDEATAILAGDALNTLA 114 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185 F +++ + IR + M+ GQ LD+ ID ++ +I + KT Sbjct: 115 FALLARDEKNGLAQIRCLSAAAGA-------MVCGQSLDMIYTGTAIDVQKLQIIHQKKT 167 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 GAL+ A GA+ + + + +L GE++GI +Q+ DD+LD D Sbjct: 168 GALLTAALHLGALPSPDYAHYQTQLTAIGEHIGIAYQIIDDMLDATSD 215 >gi|116627949|ref|YP_820568.1| geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus LMD-9] gi|116101226|gb|ABJ66372.1| farnesyl-diphosphate synthase [Streptococcus thermophilus LMD-9] gi|312278537|gb|ADQ63194.1| Geranyltranstransferase, farnesyl diphosphate synthase [Streptococcus thermophilus ND03] Length = 290 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 82/228 (35%), Positives = 127/228 (55%), Gaps = 10/228 (4%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-H 69 K+ID + D + + + L+SAI Y++ GGK+IR + + F + Sbjct: 3 KLKKIDAAIRDFYQKKTPPVSSD----LISAILYSVDSGGKRIRPLIFLDLLEGFGLELT 58 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + + A++E IH SLIHDDLP+MD+ RRG+ T H ++DE TAI+AG+ L F Sbjct: 59 PSHFDIAASLEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFA 118 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGA 187 +++ T+L IR QL+ +L+H G GM+GGQMLD++ E + D +Q+ I + KTG Sbjct: 119 LVAQ--TELSAEIRVQLIHALSHASGTFGMVGGQMLDMKGEGLELDLSQLAKIHENKTGK 176 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L+ F + I+A E L+ G +G+ FQ+ DD+LD D Sbjct: 177 LLTFPFVAAGIVAQQEDRVMENLQEAGRLIGLAFQVRDDILDVTADFE 224 >gi|317050825|ref|YP_004111941.1| polyprenyl synthetase [Desulfurispirillum indicum S5] gi|316945909|gb|ADU65385.1| Polyprenyl synthetase [Desulfurispirillum indicum S5] Length = 326 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 20/241 (8%) Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59 MN + + L+ I+ + L +Q S GGK+IR LV Sbjct: 1 MNIADVYALLKPQVAEIEQEIQSNLTSRVRRVQEVGEYIFQS-------GGKRIRPLLVL 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 + L + A+++G IE IH +L+HDD+ +D +RRG+ + + ++ I+ Sbjct: 54 LTSKLCGGDERRAIKIGGIIEYIHTATLLHDDV--IDEACVRRGRDSANFKFGNEMVILV 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ L + AF+++ + + R Q LS + +G + Q++ D + F Sbjct: 112 GDYLYSKAFQVLVADG-----DPRVQKTLSDVTTLMSEGEVF-QLVKSFDFSVTLEDYFQ 165 Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 I + KT L+ + G A S+ + L FG N+G+ FQL DD+LD D L Sbjct: 166 IIEHKTAILIAACAKCGGYTAPDLSEEMADALWDFGYNIGMAFQLIDDILDYMGDASTLG 225 Query: 236 K 236 K Sbjct: 226 K 226 >gi|229592556|ref|YP_002874675.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25] gi|229364422|emb|CAY52224.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25] Length = 322 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRETA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS I +G + Q+ + Sbjct: 100 NAMWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMKILSQATRIIAEGEVL-QLSKV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A + A+ + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCGATVEQAEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|254369351|ref|ZP_04985363.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp. holarctica FSC022] gi|157122301|gb|EDO66441.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp. holarctica FSC022] Length = 325 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 18/236 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66 + K I ++ + + + + L++ I + ++ GGK++R LV A N Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALN 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L + Sbjct: 62 YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ S DN++ +L+ N +G + Q+L+ ++ + E + + KT Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173 Query: 187 ALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEED---LPK 236 L ACE +++ Q+ + R++ +G LG FQ+ADD+LD D L K Sbjct: 174 KLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGK 229 >gi|302877611|ref|YP_003846175.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] gi|302580400|gb|ADL54411.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2] Length = 320 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A FN + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 41 GGKRLRPALVVLSAHAFNYTGEHHHELAAVVEFIHTATLLHDDV--VDESGLRRGRETAN 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ + +R L+ N+ +G + Q+L+ Sbjct: 99 ALFGNAASVLVGDFLYSRAFQMMVEVGS-----MRVMQTLADATNVIAEGEVL-QLLNCN 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D +D + KT L A GAI+A S ++ +G +LG FQL DD+L Sbjct: 153 DADVDAENYMRVIHYKTAKLFEAAMRLGAILAKTSSEDEAAAATYGMHLGTAFQLIDDVL 212 Query: 229 DCEEDLP 235 D D Sbjct: 213 DYSADEA 219 >gi|169794893|ref|YP_001712686.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii AYE] gi|213157703|ref|YP_002320501.1| polyprenyl synthetase [Acinetobacter baumannii AB0057] gi|215482441|ref|YP_002324625.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB307-0294] gi|301347512|ref|ZP_07228253.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB056] gi|301512686|ref|ZP_07237923.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB058] gi|301597254|ref|ZP_07242262.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB059] gi|332855972|ref|ZP_08436103.1| polyprenyl synthetase [Acinetobacter baumannii 6013150] gi|332870742|ref|ZP_08439424.1| polyprenyl synthetase [Acinetobacter baumannii 6013113] gi|169147820|emb|CAM85683.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii AYE] gi|193078216|gb|ABO13173.2| geranyltranstransferase [Acinetobacter baumannii ATCC 17978] gi|213056863|gb|ACJ41765.1| polyprenyl synthetase [Acinetobacter baumannii AB0057] gi|213985840|gb|ACJ56139.1| Geranyltranstransferase(Farnesyl-diphosphate synthase) [Acinetobacter baumannii AB307-0294] gi|332727208|gb|EGJ58659.1| polyprenyl synthetase [Acinetobacter baumannii 6013150] gi|332732037|gb|EGJ63312.1| polyprenyl synthetase [Acinetobacter baumannii 6013113] Length = 303 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66 L++ +RI DLL A+ + L SA+ +A+ LGGK++R L ASL N Sbjct: 12 LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L + Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125 Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 AFE++ S + + ++L M+ GQ+LD+Q E I + ++ I Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185 Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA+ + + +LR +G+ +G+ FQ+ DD+LD Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITS 237 >gi|121534144|ref|ZP_01665969.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1] gi|121307247|gb|EAX48164.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1] Length = 322 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 15/228 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 + + ++ + ++ L +++ + TQ LL A GGK++R L CA Sbjct: 6 MFALVEADLLAVEQALSEIIHSPVDQL-TQVGRHLLQA------GGKRLRPALYLLCAKS 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 V + L + AIE IH +L+HDD+ +DN RRG PT + ++ ++++G+ L Sbjct: 59 RQVETASLLPIAVAIEMIHMATLVHDDV--IDNAATRRGLPTANSRWGNHVSVLSGDFLF 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 AF ++ T I + ++ S+ L Q+ D E + K Sbjct: 117 AKAFSTVAKHATPAMLRILTDVVCSMCEGEIL------QIRDTFSAEQSEEDYLVRIAKK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 T + +CE G + A + +E LR +G +G+ FQ+ DD+LD Sbjct: 171 TADFIAASCELGGLSAGLAPDEVAALRRYGHAVGMAFQITDDILDITA 218 >gi|254488785|ref|ZP_05101990.1| geranyltranstransferase [Roseobacter sp. GAI101] gi|214045654|gb|EEB86292.1| geranyltranstransferase [Roseobacter sp. GAI101] Length = 301 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 92/240 (38%), Positives = 137/240 (57%), Gaps = 12/240 (5%) Query: 3 GGLPSKLQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59 +P + + + + L DL H + ++ A+RYA+ GGK +R+FLV Sbjct: 4 FDIPMQAELTRRPFEEALGKAADLATGQVLHGLGGVDGQIAEAMRYAVTGGKGLRAFLVI 63 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E A L V A AIE +H YSL+HDD+P MDN +RRG+PTVH+++DEVTA++A Sbjct: 64 ESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDNDDLRRGQPTVHVKWDEVTAVLA 123 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175 G+ L AFE+ + T D R L+ L H G++GM+GGQ LDI E + Sbjct: 124 GDALQALAFELAAQ--TGCSDAGRVALVAGLAHASGVRGMVGGQALDIAAESASVPLTLD 181 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q+ +Q KTGAL+ +A +G +MA +++ L+ + +LG+ FQ+ADD+LD E D Sbjct: 182 QITTLQAGKTGALIEWAATAGPVMA---RDDPRPLQRYARDLGLAFQIADDILDIEGDAE 238 >gi|256843404|ref|ZP_05548892.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus 125-2-CHN] gi|293380304|ref|ZP_06626378.1| polyprenyl synthetase [Lactobacillus crispatus 214-1] gi|256614824|gb|EEU20025.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus 125-2-CHN] gi|290923119|gb|EFE00048.1| polyprenyl synthetase [Lactobacillus crispatus 214-1] Length = 289 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 74/222 (33%), Positives = 116/222 (52%), Gaps = 17/222 (7%) Query: 19 ILDDLLLQTASHMQTQHND-RLLSAIRYALLGG-KKIRSFLVTECASLFNVN-HLTALRV 75 ++DD L A H+ ++ D ++ + Y+++GG K++R L + +R+ Sbjct: 14 VIDDYL---AKHLASEVEDQKISQIMAYSVMGGGKRLRPLLFLATLNALGRKIEEPEIRI 70 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 71 ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGS 130 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMC 190 ++L+ +T +G GM+GGQ LDI D + ++ +KTG L+ Sbjct: 131 KS------AKLVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTGCLIQ 184 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E A+ A AS E+ +L F + G +Q+ DDL+D E Sbjct: 185 ASVEMAAVYAGASDIEQVKLVDFAKIFGRSYQIYDDLVDVVE 226 >gi|66043965|ref|YP_233806.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae B728a] gi|289674837|ref|ZP_06495727.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae FF5] gi|63254672|gb|AAY35768.1| Trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae B728a] gi|330941237|gb|EGH44102.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. pisi str. 1704B] gi|330954228|gb|EGH54488.1| trans-hexaprenyltranstransferase [Pseudomonas syringae Cit 7] gi|330977523|gb|EGH77469.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 322 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS I +G + Q+ I Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMKILSKATRIIAEGEVL-QLSKI 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A + +A Q + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPQEQSEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|295398947|ref|ZP_06808929.1| heptaprenyl diphosphate synthase component II [Geobacillus thermoglucosidasius C56-YS93] gi|312110446|ref|YP_003988762.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y4.1MC1] gi|294978413|gb|EFG54009.1| heptaprenyl diphosphate synthase component II [Geobacillus thermoglucosidasius C56-YS93] gi|311215547|gb|ADP74151.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. Y4.1MC1] Length = 321 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 8/225 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 KL+ ++ L + + +++ + +A+ GGK+IR V A Sbjct: 2 KLKAMYSFLNADLRAVEKELEETVRSDYAQLSEAALHLLQAGGKRIRPVFVLLAAKFGTY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + V A+E IH SL+HDD+ +D+ +RRG+ T+ ++ A+ AG+ + + Sbjct: 62 DIERVKHVAVALELIHMASLVHDDV--IDDAELRRGRQTIKAKWSNRFAMYAGDYMFARS 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E+++ + L I + ++ + Q+ D + K KT Sbjct: 120 LELMTRLENPLAHRILANTIVEVCRGEI------EQIKDKYRFDQNLRCYLRRIKRKTAL 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ +C+ GAI A+A++ +RL FG +G+ FQ+ DD+LD Sbjct: 174 LIAASCQLGAIAANAAKRTADRLYLFGYYVGMSFQITDDILDFTG 218 >gi|190570943|ref|YP_001975301.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019458|ref|ZP_03335264.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357215|emb|CAQ54632.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994880|gb|EEB55522.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 328 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 12/232 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTE 60 L + L ++SK D + DLL + +++ +L + I L+ GGKKIR L+ Sbjct: 2 LNTDLTKSSKLDDIVSSDLLAMNDFIFKNVNDEGTKLATDITSHLINSGGKKIRPKLIFI 61 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 + N + + + + A++E IH +L+HDD+ +D R G T + + ++I+ G Sbjct: 62 MCKMLNYSGESRVNIAASVEFIHNATLLHDDV--LDESKARHGVATANKIWGNKSSILVG 119 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + LLT AF + N+ +LS N+ ++G + QM D F I Sbjct: 120 DLLLTLAFRWLIECG-----NLSVLSILSKASNLLVKGEIK-QMTTRFDPNTIRKNYFNI 173 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT +L E+ ++++ A+ +E ERLR FG N G+ FQ+ DD+LD Sbjct: 174 IGEKTASLFSACSEAASVVSGATSDETERLRNFGFNFGMAFQIIDDVLDYTA 225 >gi|56708131|ref|YP_170027.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670602|ref|YP_667159.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis FSC198] gi|134301942|ref|YP_001121911.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|208779313|ref|ZP_03246659.1| polyprenyl synthetase family protein [Francisella novicida FTG] gi|224457222|ref|ZP_03665695.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254370617|ref|ZP_04986622.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874931|ref|ZP_05247641.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|56604623|emb|CAG45677.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320935|emb|CAL09060.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp. tularensis FSC198] gi|134049719|gb|ABO46790.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151568860|gb|EDN34514.1| hypothetical protein FTBG_00405 [Francisella tularensis subsp. tularensis FSC033] gi|208745113|gb|EDZ91411.1| polyprenyl synthetase family protein [Francisella novicida FTG] gi|254840930|gb|EET19366.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159332|gb|ADA78723.1| polyprenyl synthetase family protein [Francisella tularensis subsp. tularensis NE061598] Length = 325 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 18/236 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66 + K I ++ + + + + L++ I + ++ GGK++R LV A N Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L + Sbjct: 62 YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ S DN++ +L+ N +G + Q+L+ ++ + E + + KT Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173 Query: 187 ALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEED---LPK 236 L ACE +++ Q+ + R++ +G LG FQ+ADD+LD D L K Sbjct: 174 KLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGK 229 >gi|146278824|ref|YP_001168983.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145557065|gb|ABP71678.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025] Length = 289 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 91/237 (38%), Positives = 135/237 (56%), Gaps = 15/237 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L + + R+ LD L + ++ A+RYA+ GGK++R FLV E A Sbjct: 2 SFSKALTDAAARVQARLDAALAD-------REELPVVHAMRYAVQGGKRLRGFLVLESAR 54 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L + A+ A+IE +H YSL+HDD+P MD+ +RRG PTVH ++DE TA++AG+ L Sbjct: 55 LHGIVPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDAL 114 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFM 179 T AFE+++ P +R +L+ +L G +GM+ GQ LDI E + Q+ Sbjct: 115 QTLAFELLADPALG-PAEVRIRLVETLAKASGAEGMVLGQALDIAAETAAVPLTLEQITH 173 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 +Q KTGAL+C++ E+GAI+ A LR + LG+ FQ+ADD+LD E D K Sbjct: 174 LQAGKTGALICWSAEAGAILGQADTG---PLRRYATALGLAFQIADDILDVEGDADK 227 >gi|157374092|ref|YP_001472692.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3] gi|157316466|gb|ABV35564.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3] Length = 323 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPLLSILAARAIDYKGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ N+ +L+ N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELG-----NMEVLEVLADATNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A + + L +G+ LG FQL DDLL Sbjct: 155 DPDTTEESYMRVIYCKTAKLFEAATRLAGVLAQSPIEAQNALADYGKFLGTAFQLTDDLL 214 Query: 229 DCEEDLP 235 D D Sbjct: 215 DYTADTE 221 >gi|330886861|gb|EGH20296.1| geranyltranstransferase [Pseudomonas syringae pv. mori str. 301020] Length = 296 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 14/242 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + S ++ R++ L+ L + + +RL A+RY+++ GGK++R L Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116 Query: 124 LTYAFEIISSPKTQLKD-NIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 + AF + +P +D R Q++ + G G L +D+ + Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNPLAAAAGPAGYGGAGQAIDLGSVGLKLDQAALEY 176 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 + + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L Sbjct: 177 MHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|296535664|ref|ZP_06897840.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957] gi|296264015|gb|EFH10464.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957] Length = 347 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 8/231 (3%) Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65 L + L+ + + MQ+ A GGK++R LV A L Sbjct: 23 EDALTALVSLVQEDLEACNREIIARMQSPVQLIPQLAAHLIAAGGKRLRPLLVLAAARLC 82 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + + A +E IH +L+HDD+ +D +RRG+ + + + +++ G+ L Sbjct: 83 GYRGQRHVGLAACVEFIHTATLLHDDV--VDESDLRRGQASANAIFGNKASVLVGDFLFA 140 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 AF+++++ + + +L +G + Q++ D E Q + + KT Sbjct: 141 RAFQLMTADGS-----LEVLDILCGASATIAEGEVL-QLVIQNDTSSTEAQYLEVIEGKT 194 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 AL A GA++A + E + L +G N GI FQL DD LD + + Sbjct: 195 AALFAAATRVGAVVAERPKAEADALEAYGRNFGIAFQLVDDALDYSAEQER 245 >gi|163802656|ref|ZP_02196547.1| malate dehydrogenase [Vibrio sp. AND4] gi|159173544|gb|EDP58364.1| malate dehydrogenase [Vibrio sp. AND4] Length = 323 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKRLRPLLAILSARALGYHGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++ + I+ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----IKILKLMSDAVNVIAEGEV-QQLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + KT L A + GAI+ A +N + L+ +G+ LG FQL DD++ Sbjct: 155 NPDTTEENYMQVIYSKTARLFESATQIGAILNDAPENVEVALQNYGKFLGTAFQLIDDVM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|313124102|ref|YP_004034361.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280665|gb|ADQ61384.1| Farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 287 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 13/231 (5%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65 + +E + I++D L + + + R + Y+++ GGK++R L Sbjct: 2 TTFKEFQAKYTPIINDFLEGQLA--KESDDSRFAEIMAYSVMAGGKRLRPLLFLATLDAL 59 Query: 66 NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 V ++ IE IH YSLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L Sbjct: 60 GVEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQ 119 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQ 181 + I+ + K L+ +T +G +GM+ GQ LDI +E E + ++ Sbjct: 120 PLGIQWIAQAEHNWK------LVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDHME 173 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +KTG L+ + + +A + ++ F ++ G +QL DDL+D E Sbjct: 174 WLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVE 224 >gi|297529620|ref|YP_003670895.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. C56-T3] gi|297252872|gb|ADI26318.1| heptaprenyl diphosphate synthase component II [Geobacillus sp. C56-T3] Length = 320 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 8/225 (3%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 KL+ + L + + +++++ +A+ GGK+IR V A + Sbjct: 2 KLKAMYSFLSDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + V A+E IH SL+HDD+ +D+ +RRG+PT+ ++ A+ G+ L + Sbjct: 62 DFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIKARWSNRFAMYTGDYLFARS 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E ++ + + ++ ++ + H Q+ D + KT Sbjct: 120 LERMAELDSPRAHQVLAKTIVEVCHGEI------EQIKDKYRFDQPLRTYLRRIRRKTAL 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ +C+ GA+ A A + +L FG +G+ FQ+ DD+LD Sbjct: 174 LIAASCQLGALAAGAPEAVANQLYWFGHCVGMSFQITDDILDFTG 218 >gi|226946118|ref|YP_002801191.1| trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ] gi|226721045|gb|ACO80216.1| Trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ] Length = 322 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + + AAIE +H +L+HDD+ +D+ +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGNALGKCDERMRLLAAAIEFLHTSTLLHDDV--VDDSELRRGRSTS 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L FE++ + + ++S + +G + Q+ + Sbjct: 100 NALWGNAPSVLVGDFLYARCFEMLVELAS-----MPVMRIMSQATRVIAEGEVL-QLSKV 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L A A +A A+ + E LRCFG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEAASHGAASLAGATSEQAEALRCFGDSLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|288818510|ref|YP_003432858.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus TK-6] gi|288787910|dbj|BAI69657.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus TK-6] gi|308752100|gb|ADO45583.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6] Length = 264 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 15/224 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67 L+ +I++ L +LL + L A+ Y + GK+IR + ++ Sbjct: 2 LELWKSQIESRLRELLKPFEPRI-------LYDAMSYYVFQEGKRIRPLFLCAVSNALGG 54 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N A+ VG AIE IH YSL+HDDLP++DN RRGKP+ H+ + E AI+AG+ LL A Sbjct: 55 NLQDAITVGCAIEFIHNYSLVHDDLPALDNDDFRRGKPSCHVLFGEDMAILAGDALLNLA 114 Query: 128 FEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 FE +S+ + L + ++ ++ + G QGM+GGQ++D++ + I KT Sbjct: 115 FETLSNRENFISLSEKDLIYIIRLVSESSGFQGMVGGQVMDVKKLGDPWS----ISLKKT 170 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 ++ G I++ E L G +G++FQL DD D Sbjct: 171 ASMFSAVFACGGIISK-KYERVEYLSKAGTQVGLLFQLIDDYKD 213 >gi|222099500|ref|YP_002534068.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359] gi|221571890|gb|ACM22702.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359] Length = 272 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 64/218 (29%), Positives = 96/218 (44%), Gaps = 10/218 (4%) Query: 21 DDLLLQTASHMQTQHNDRLLS-AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78 + + + + H + L A++Y++ GGK+IR LV V + V A Sbjct: 3 KETIERRIEELVKPHFNLLTESAMQYSVTAGGKRIRPLLVLTVGEDIGVEEERLVDVAVA 62 Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138 +E H SL+HDDLP +DN RRGKP+ H Y E A++AG+GL AF I+ + Sbjct: 63 VELFHTASLVHDDLPPIDNADFRRGKPSCHRAYGEGIALLAGDGLFFLAFSQIAKVREPK 122 Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198 S+ L + Q ++ I V + KTGAL F + + Sbjct: 123 LFEEFSETAYKLLLGEAMDVEFERQ-----EKEISVEMVEKMYSFKTGALFAFCFSAPFL 177 Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + ++L GE G+ FQ+ DDL D L K Sbjct: 178 LKGLDHTFVKKL---GEKFGVAFQIYDDLKDVLGSLEK 212 >gi|300024374|ref|YP_003756985.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299526195|gb|ADJ24664.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 342 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 15/232 (6%) Query: 9 LQENSKRIDTIL----DDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTEC 61 L+E ++++ +L DDL + +D ++ + + L+ GGK++R L Sbjct: 14 LRETGQKLEPLLALVADDLEAINRIILDKAVSDVEMIPELAHHLIDSGGKRLRPMLALAS 73 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 A L +R +A+E +H +L+HDD+ +D RRG+ T + + +++ G+ Sbjct: 74 AKLCGYGGNGHIRTASAVEFMHTATLLHDDV--VDESATRRGRKTARMIWGNQASVLVGD 131 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 LL AF++ + + ++S +G + Q+ ++ E I Sbjct: 132 FLLGQAFKMFVDVGS-----LPVLRIMSNAAATIAEGEVM-QLAAAKNTSTTEDDYLAII 185 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT AL A ESGA + E+ LR +G+NLG+ FQL DD LD D Sbjct: 186 NAKTAALFSAAAESGAALTQRPPEEQSALRSYGKNLGLAFQLVDDALDYAGD 237 >gi|167622844|ref|YP_001673138.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] gi|167352866|gb|ABZ75479.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4] Length = 323 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLSILAARAIDYKGDSHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRKTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ K + +L+ N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELKC-----LDVLEILADATNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A + + L +G+ LG FQL DDLL Sbjct: 155 DPDTTEDSYMRVIYCKTAKLFEAATRLAGLLADSPIEVQTALAEYGKYLGTAFQLTDDLL 214 Query: 229 DCEEDLP 235 D D Sbjct: 215 DYTADTE 221 >gi|294339015|emb|CAZ87362.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Thiomonas sp. 3As] Length = 336 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 20/238 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61 + + + E+ +R+D + L + + T Y + GG K++R L+ Sbjct: 18 HSVFAPITEDMERVDRAIHTHLASEVALINTIGG--------YIVAGGGKRLRPALLLLV 69 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ Sbjct: 70 SQALGFRGPQQHIMAAVVELIHTATLLHDDV--VDESSMRRGRETSNALFGNSASVLVGD 127 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L + AF+++ S + +R +L+ N+ +G + Q+L++ D +DE + + Sbjct: 128 FLYSRAFQMMVSVGS-----MRILDILADATNVIAEGEVL-QLLNMHDPEVDEQRYLQVI 181 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + KT L A GA++A A N +E + G + G FQL DDLLD +L K Sbjct: 182 RFKTAKLFEAAARIGAVLADADANTQEEMALAGRSFGTAFQLIDDLLDYSGNSAELGK 239 >gi|184159332|ref|YP_001847671.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii ACICU] gi|332874228|ref|ZP_08442150.1| polyprenyl synthetase [Acinetobacter baumannii 6014059] gi|183210926|gb|ACC58324.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii ACICU] gi|322509243|gb|ADX04697.1| Geranyltranstransferase [Acinetobacter baumannii 1656-2] gi|323519272|gb|ADX93653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii TCDC-AB0715] gi|332737587|gb|EGJ68492.1| polyprenyl synthetase [Acinetobacter baumannii 6014059] Length = 303 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66 L++ +RI DLL A+ + L SA+ +A+ LGGK++R L ASL N Sbjct: 12 LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L + Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125 Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 AFE++ S + + ++L M+ GQ+LD+Q E I + ++ I Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185 Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA+ + + +LR +G+ +G+ FQ+ DD+LD Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITS 237 >gi|52425655|ref|YP_088792.1| IspA protein [Mannheimia succiniciproducens MBEL55E] gi|52307707|gb|AAU38207.1| IspA protein [Mannheimia succiniciproducens MBEL55E] Length = 358 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 57/223 (25%), Positives = 110/223 (49%), Gaps = 12/223 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNVNH 69 K I ++ D + + + Q N L++ + Y ++ GGK+IR + A N Sbjct: 39 KTIQALVSDDMQKVNEEILAQLNSDVPLINQLGYYIIHSGGKRIRPMIANLAAKALNYQD 98 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 + A IE +H +L+HDD+ +D +RRG PT + ++ +++ G+ + T +F+ Sbjct: 99 NKHITCAAFIEFLHTATLLHDDV--VDESDMRRGNPTANAEFGNAASVLVGDYMHTRSFQ 156 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 +++ + +R ++S N+ +G + Q+++++D E + KT L Sbjct: 157 MMTELGS-----LRILQVMSAATNVIAEGEV-QQLMNVRDPDTTEQNYMKVIYSKTARLF 210 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + ++ AI+A A +E L+ +G LG FQL DD+LD Sbjct: 211 EVSTQTVAILADAGAAIEEGLQNYGRYLGTAFQLVDDILDYSA 253 >gi|71906297|ref|YP_283884.1| polyprenyl synthetase [Dechloromonas aromatica RCB] gi|71845918|gb|AAZ45414.1| Polyprenyl synthetase [Dechloromonas aromatica RCB] Length = 341 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 18/226 (7%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73 K +D ++ D L ++ + S GGK++R LV A + Sbjct: 34 KAVDAVIRDRLYSDVVLVRQVAEYIISS-------GGKRMRPALVLLAAGALDYQGTRHQ 86 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF+++ + Sbjct: 87 EMAAVVEFIHTATLLHDDV--VDESALRRGRDTANAMFGNAASVLVGDFLYSRAFQMMVA 144 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 DN+R +LS N+ +G + Q+++ D +DE + + KT L A Sbjct: 145 -----VDNMRVMQVLSDATNVIAEGEVL-QLMNCHDADVDEARYMQVIHYKTAKLFEAAA 198 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 + GAI+ A+ ++ L +G +LG FQL DD+LD E D K Sbjct: 199 QLGAILGQATPEVEKALTAYGMHLGTAFQLIDDVLDYSGQEADTGK 244 >gi|91794278|ref|YP_563929.1| trans-hexaprenyltranstransferase [Shewanella denitrificans OS217] gi|91716280|gb|ABE56206.1| Trans-hexaprenyltranstransferase [Shewanella denitrificans OS217] Length = 323 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L L++ A +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLTVLACRAMGYEGDKHLKLAAIVEFIHTASLLHDDV--VDESLLRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ D++ +L+ T N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTEL-----DSLHVLKVLANTTNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A AS E+ L +G+ LG FQL DDLL Sbjct: 155 DPNTTEANYMRVIYCKTAKLFEAATLLAGVLAGASVAEQIALGEYGKFLGTAFQLTDDLL 214 Query: 229 DCEE---DLPK 236 D +L K Sbjct: 215 DYTASSDELGK 225 >gi|319404558|emb|CBI78164.1| octaprenyl-diphosphate synthase [Bartonella rochalimae ATCC BAA-1498] Length = 337 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A +F +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 56 GGKRIRPMITLATAHMFGYQGDKHIKLATAVEFMHTATLLHDDV--VDESALRRGKSTAR 113 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + +I+ G+ LL AF+++ + + + +LS I +G + Q+ + Sbjct: 114 IIWGNQASILVGDFLLGQAFKMMVDVGS-----LDALSVLSNAAAIIAEGEVM-QLSAAK 167 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + + I KT AL A E G I+A E+ L +G +LG+ FQL DD+L Sbjct: 168 NIETNVSDYLKIINAKTAALFSAAAEVGPIIAGYGPEERSALHQYGLSLGLAFQLIDDVL 227 Query: 229 DCEE 232 D Sbjct: 228 DYSS 231 >gi|254448914|ref|ZP_05062369.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015] gi|198261451|gb|EDY85741.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015] Length = 322 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L++ A IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPQLAVLAARAAGYQGEDHLQIAAIIEFIHTATLLHDDV--VDASELRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + A++ G+ L + +FE++ D++R +LS N+ +G + Q+L+I Sbjct: 101 AVFGNEAAVLVGDFLYSRSFEMMVEL-----DSMRIMSILSRATNVIAEGEVM-QLLNIH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + + KT L A GA+++ Q +++ L +G +LG FQL DD+L Sbjct: 155 DADTTEARYLEVIHSKTAKLFEAATRIGAVLSGLPQEKEQALADYGMHLGTAFQLIDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|21227869|ref|NP_633791.1| dimethylallyltransferase [Methanosarcina mazei Go1] gi|20906283|gb|AAM31463.1| Dimethylallyltransferase [Methanosarcina mazei Go1] Length = 324 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 17/236 (7%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 M L +++ S +D +D+LL + L A RY + GGK++R ++ Sbjct: 2 MLMTLVDEIKNRSSHVDAAIDELL-------PVTRPEELYKASRYLVDAGGKRLRPAVLI 54 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A N + L A+E +H ++LIH MD IRRG P VH+++ E AI+A Sbjct: 55 LAAEAVGSNLRSVLPAAVAVELVHNFTLIH--DDIMDRDDIRRGMPAVHVKWGEAGAILA 112 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176 G+ L + AFEI+S + + ++ +LS T + GQ LD+ E + E++ Sbjct: 113 GDTLYSKAFEILSKVENEPVRVLKCMDVLSKT----CTEICEGQWLDMDFETRKKVTESE 168 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + + KT L A + GA++ AS E L +G +GI FQ+ DD+LD Sbjct: 169 YLEMVEKKTSVLYAAAAKIGALLGGASDEVAEALSEYGRLIGIGFQMYDDVLDMTA 224 >gi|89256379|ref|YP_513741.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica LVS] gi|115314825|ref|YP_763548.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica OSU18] gi|254367716|ref|ZP_04983737.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica 257] gi|89144210|emb|CAJ79480.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica LVS] gi|115129724|gb|ABI82911.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica OSU18] gi|134253527|gb|EBA52621.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. holarctica 257] Length = 325 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 18/236 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66 + K I ++ + + + + L++ I + ++ GGK++R LV A N Sbjct: 2 QQLKDIQALVKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALN 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L + Sbjct: 62 YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ S DN++ +L+ N +G + Q+L+ ++ + E + + KT Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173 Query: 187 ALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEED---LPK 236 L ACE +++ Q+ + R++ +G LG FQ+ADD+LD D L K Sbjct: 174 KLFEAACELAGLISIDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGK 229 >gi|119509566|ref|ZP_01628713.1| Polyprenyl synthetase [Nodularia spumigena CCY9414] gi|119465755|gb|EAW46645.1| Polyprenyl synthetase [Nodularia spumigena CCY9414] Length = 323 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 13/221 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71 ++ L LL + + + L A + GGK+IR +V + + Sbjct: 11 VEADL-RLLAENLKQLVGNRHPILFMAAEHLFGAGGKRIRPAIVLLISRATMLEEDITLR 69 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 R+ E IH SL+HDD+ +D +RRG PTVH + A++AG+ L + + Sbjct: 70 HRRLAEITEMIHTASLVHDDV--VDESQMRRGVPTVHSLFGNRIAVLAGDFLFAQSSWYL 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 ++ + S++++ L Q ++ D I KT +L+ Sbjct: 128 ANLDNLEVVKLLSEVIMDLATGEI------QQGINCFDNGISIETYLKKSYYKTASLIAN 181 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + ++ A+++ AS E L +G +LG+ FQ+ DD+LD Sbjct: 182 SSKAAALLSDASPETAENLYDYGRHLGLAFQIVDDILDFTS 222 >gi|222150203|ref|YP_002551160.1| geranyltranstransferase [Agrobacterium vitis S4] gi|221737185|gb|ACM38148.1| geranyltranstransferase [Agrobacterium vitis S4] Length = 283 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 117/220 (53%), Positives = 155/220 (70%), Gaps = 3/220 (1%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA 77 +L +LL + +LL+A+R+A+L GGK++R FLV E A LF+ ALRVGA Sbjct: 1 MLTELLQPEPLSDEIARPGQLLAAMRHAVLNGGKRLRPFLVVESARLFHGQDDAALRVGA 60 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+EC+HCYSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ LLT+AFEII+SP+T Sbjct: 61 ALECLHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDSLLTFAFEIIASPQTT 120 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACES 195 L D ++ L+L+L GL GM GGQ LD+ E DE + +Q MKTGAL+ FACE+ Sbjct: 121 LPDAAKTALVLALARAAGLGGMAGGQALDLAAEKHAPDEVGIVTLQAMKTGALLRFACEA 180 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 G ++A AS ++ERLR FGE +G FQLADDLLD D Sbjct: 181 GPVIAGASNEDRERLRQFGELIGRAFQLADDLLDLTADAA 220 >gi|228476852|ref|ZP_04061497.1| geranyltranstransferase [Streptococcus salivarius SK126] gi|228251426|gb|EEK10571.1| geranyltranstransferase [Streptococcus salivarius SK126] Length = 290 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 82/225 (36%), Positives = 127/225 (56%), Gaps = 10/225 (4%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTA 72 +ID + D + + + L++AI Y++ GGK+IR + + F + + Sbjct: 6 KIDAAIRDYYQKRNIPVSSD----LITAILYSVDSGGKRIRPLIFLDLLEGFGLELTPSH 61 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 V A++E IH SLIHDDLP+MD+ RRG+ T H ++DE TAI+AG+ L F++++ Sbjct: 62 FDVAASLEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFDLLA 121 Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190 T L IR QL+ L+H+ G GM+GGQMLD++ E +D +Q+ I + KTG L+ Sbjct: 122 Q--TDLSAEIRVQLIQVLSHSSGTFGMVGGQMLDMKGEGQELDLSQLAKIHEHKTGKLLT 179 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 F + I+A Q E L+ G +G+ FQ+ DD+LD D Sbjct: 180 FPFVAAGIVAQKDQQVLENLQEAGHLIGLAFQVRDDILDVTADFE 224 >gi|157960679|ref|YP_001500713.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345] gi|157845679|gb|ABV86178.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345] Length = 323 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + L++ A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLSILAARAIDYKGDSHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRKTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ ++ + +L+ N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELRS-----LDVLEILADATNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A + + L +G+ LG FQL DDLL Sbjct: 155 DPDTTEDSYMRVIYCKTAKLFEAATRLAGLLADSPIEVQTALADYGKYLGTAFQLTDDLL 214 Query: 229 DCEEDLP 235 D D Sbjct: 215 DYTADTE 221 >gi|219669380|ref|YP_002459815.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] gi|219539640|gb|ACL21379.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2] Length = 322 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 18/235 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L +++ + +R++ L + +T + Q +LL A GGK++R Sbjct: 6 LFNQINSDLQRVEKELHAYI-KTDFPILDQSAVQLLEA------GGKRLRPAFTLLAGKF 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + L V A+E IH +L+HDD+ +D RRG+PTV ++ V +I G+ LL Sbjct: 59 YGYPIDRLLPVAMALELIHMATLVHDDV--VDASMTRRGRPTVKAKWGNVVSIATGDYLL 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 A E+++ I +++ + ++ Q+ D + Q + K K Sbjct: 117 AKALELLAQINHPEVSKILAEVSVEMSQGEI------QQIKASNDVNQNLKQYYYRIKRK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 T L+ +C+ GA+++ A + E L +G LG+ FQ+ DD+LD +L K Sbjct: 171 TAMLISASCKLGALISAAPRREVWALGAYGHALGMAFQIVDDVLDVTAEASELGK 225 >gi|88859033|ref|ZP_01133674.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas tunicata D2] gi|88819259|gb|EAR29073.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas tunicata D2] Length = 323 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + A +E IH +L+HDD+ +D +RRG T + Sbjct: 43 GGKRVRPMLSILSAKALGYEGDAHITLAAIVEFIHTATLLHDDV--VDESDLRRGNATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF+++ + +R +L+ N+ +G + Q+++ Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLMVGL-----EEMRVMKILADATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + A++ +E+L+ +G +LG FQL DD+L Sbjct: 155 DPDTTEQSYMQVIYSKTAKLFEAATQLAAVITRKDAATEEQLKLYGMHLGTAFQLVDDVL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|145300249|ref|YP_001143090.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853021|gb|ABO91342.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp. salmonicida A449] Length = 323 Score = 184 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 8/183 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L A L++ A IE IH +L+HDD+ +D +RRG+ T Sbjct: 42 AGGKRMRPMLTVMAARALGYEGQDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +F+++S N+R +LS N +G + Q+++ Sbjct: 100 NALFGNAASVLVGDYLYSRSFQMMSELS-----NLRVMEILSDATNTIAEGEVL-QLMNC 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 D E + KT L A A++ H + ++ + +G+ LG FQ+ DD+ Sbjct: 154 NDPDTTEQSYMTVIYCKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDV 213 Query: 228 LDC 230 +D Sbjct: 214 MDY 216 >gi|239502342|ref|ZP_04661652.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii AB900] Length = 303 Score = 184 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66 L++ +RI DLL A+ + L SA+ +A+ LGGK++R L ASL N Sbjct: 12 LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L + Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125 Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 AFE++ S + + ++L M+ GQ+LD+Q E I + ++ I Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185 Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA+ + + +LR +G+ +G+ FQ+ DD+LD Sbjct: 186 RNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITS 237 >gi|124494424|gb|ABN13312.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis] Length = 348 Score = 184 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 12/219 (5%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 D++ + L A + L GGK+IR V + + V +E Sbjct: 43 DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 102 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+ +L + E+++ Sbjct: 103 MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAH 160 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 I SQ ++ + +G + G+ Q+ K KT L+ +C+ GAI + Sbjct: 161 RILSQTIVEVC--LGEIEQIKGKYNMEQN----LRTYLRRIKRKTALLIAVSCQLGAIAS 214 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 A + + L FG +G+ +Q+ DD+LD EE+L K Sbjct: 215 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 253 >gi|156502468|ref|YP_001428533.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|290953802|ref|ZP_06558423.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312813|ref|ZP_06803545.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica URFT1] gi|156253071|gb|ABU61577.1| polyprenyl synthetase family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 325 Score = 184 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 18/236 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66 + K I ++ + + + + L++ I + ++ GGK++R LV A N Sbjct: 2 QQLKDIQALVKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALN 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L + Sbjct: 62 YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ S DN++ +L+ N +G + Q+L+ ++ + E + + KT Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173 Query: 187 ALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEED---LPK 236 L ACE +++ Q+ + R++ +G LG FQ+ DD+LD D L K Sbjct: 174 KLFEAACELAGLISIDKQDYTKYQGRIKNYGVYLGNAFQITDDVLDYVSDAESLGK 229 >gi|329297304|ref|ZP_08254640.1| polyprenyl synthetase [Plautia stali symbiont] Length = 323 Score = 184 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK IR + A N + A IE IH +L+HDD+ +D +RRGK T + Sbjct: 43 GGKHIRPMIAVLSARALNYQGSLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++S + ++ ++S N+ +G + Q+++ Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSMGS-----LKILALMSEAVNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E + KT L A ++ AI+A A+ +++ L+ +G LG FQL DDLL Sbjct: 155 DPDITEESYMRVIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYLGTAFQLIDDLL 214 Query: 229 DCEED 233 D D Sbjct: 215 DYSAD 219 >gi|227878890|ref|ZP_03996795.1| geranyltranstransferase [Lactobacillus crispatus JV-V01] gi|256849774|ref|ZP_05555205.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus MV-1A-US] gi|262046527|ref|ZP_06019488.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus MV-3A-US] gi|227861524|gb|EEJ69138.1| geranyltranstransferase [Lactobacillus crispatus JV-V01] gi|256713263|gb|EEU28253.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus MV-1A-US] gi|260572976|gb|EEX29535.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus MV-3A-US] Length = 289 Score = 184 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 116/222 (52%), Gaps = 17/222 (7%) Query: 19 ILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRV 75 I+DD L A H+ ++ D ++ + Y+++ GGK++R L + +R+ Sbjct: 14 IIDDYL---AKHLASEVKDQKISQIMAYSVMAGGKRLRPLLFLATLNTLGKKIEEPEVRI 70 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 71 ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGS 130 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMC 190 +QL+ +T +G GM+GGQ LDI D + ++ +KTG L+ Sbjct: 131 NS------AQLVELITKAVGPNGMVGGQYLDIDSTNNASVSGDAKFINKMEWLKTGCLIQ 184 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E AI A AS EK +L F + G +Q+ DDL+D E Sbjct: 185 ASVEMAAIFAKASDIEKVKLIDFAKVFGRSYQIYDDLVDVVE 226 >gi|157165525|ref|YP_001467681.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP synthase) [Campylobacter concisus 13826] gi|112800771|gb|EAT98115.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Campylobacter concisus 13826] Length = 299 Score = 184 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 22/208 (10%) Query: 48 LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK R+ L+ + + A+RV +E +H YSLIHDDLPSMDN +RRG PT Sbjct: 35 AGGKHFRALLLLGVVENVDKSLTQKAMRVALGLEMMHTYSLIHDDLPSMDNASLRRGTPT 94 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H+ YDE TAI+AG+ L T+AF IS L + R + + L+ N G+ GM+ GQ LD Sbjct: 95 LHVTYDETTAILAGDALNTHAFYEISRA--DLPADTRIKCVEILSQNAGVSGMVLGQALD 152 Query: 167 IQDEF-------------------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207 E + ++ + KT L+ + + GA++ + + E Sbjct: 153 CFFENTNKEDIKRAKAKFGLSGKMLSLDELVFLHIHKTAKLIAASLKMGAVIVNLDEKEC 212 Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLP 235 +++ G LG+ FQ+ DD++D D Sbjct: 213 DKIYDIGLKLGLAFQIQDDIIDLTSDEA 240 >gi|91776572|ref|YP_546328.1| trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT] gi|91710559|gb|ABE50487.1| Trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT] Length = 322 Score = 184 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 108/229 (47%), Gaps = 15/229 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 + S + E+ +++D ++ L + + Q D ++++ GGK++R LV A Sbjct: 6 IQSCIAEDMQKVDAVIRKAL-HSDVVLINQVADYIINS------GGKRLRPTLVLLSAGA 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 F + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + Sbjct: 59 FGRIEAKHHELAAIIELIHTSTLLHDDV--VDESSLRRGKATANTLFGNAASVLVGDFIY 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 + F+++ ++ +R +LS N +G + Q+L++ D I + + K Sbjct: 117 SRTFQMMVGIQS-----MRVMEVLSDATNTIAEGEVL-QLLNVHDADITDEAYLRVIHYK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 T L A GAI+ ++ + +G LG FQL DD+LD D Sbjct: 171 TAKLFEAATRLGAIICGTDAQDEAAMAEYGMRLGTAFQLVDDVLDLSGD 219 >gi|157692773|ref|YP_001487235.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus SAFR-032] gi|157681531|gb|ABV62675.1| possible heptaprenyl diphosphate synthase component II [Bacillus pumilus SAFR-032] Length = 320 Score = 184 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 13/233 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 KL+ ++ +D + + +++ + L A + L GGK+IR V + Sbjct: 2 KLKAMISFLNHDIDIIEKELEQTVRSDYA-LLSEAGLHLLQAGGKRIRPVFVLLSGMFGD 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + V A+E IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+ + Sbjct: 61 YDINKIKYVAVALELIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMFAR 118 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 + E ++ + I S++++ L Q+ D + + K KT Sbjct: 119 SLEYMTKINHPMAHEILSKMVVELCLGEI------EQVKDKYNMDQNLRTYLRRIKRKTA 172 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 L+ +C+ GAI A + + L FG +G+ +Q+ DD+LD EE+L K Sbjct: 173 LLIAGSCQLGAIAAGTDEKTHKALYWFGYYVGMSYQIIDDVLDFTSTEEELGK 225 >gi|119944297|ref|YP_941977.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37] gi|119862901|gb|ABM02378.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37] Length = 331 Score = 184 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ ++ A IE IH +L+HDD+ +D+ +RRGK T + Sbjct: 51 GGKRIRPLITVLAAKALGIHDQNTTKLAAIIEFIHTATLLHDDV--VDDSDLRRGKKTAN 108 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ + N++ +LS NI +G + Q+++ Sbjct: 109 AVFGSAASVLVGDFLYTRSFQMMTQLR-----NLKVMDILSSATNIIAEGEVL-QLMNCN 162 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + I KT L A + A++ S+ + L +G+ LG FQL DD++ Sbjct: 163 DPDTTEKKYMDIIYFKTAKLFEAATQLVAVLGEQSEEIETALLNYGKYLGTAFQLTDDVM 222 Query: 229 DCEED 233 D D Sbjct: 223 DYNSD 227 >gi|154151748|ref|YP_001405366.1| farnesyltranstransferase [Candidatus Methanoregula boonei 6A8] gi|154000300|gb|ABS56723.1| Farnesyltranstransferase [Methanoregula boonei 6A8] Length = 325 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 17/232 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L + L+ +++ID +++ + L + GGK++R +V A Sbjct: 6 SDLSAYLKSVAQQIDGMIEKNFTHAGGELDRASAHLLSA-------GGKRLRPAVVMLSA 58 Query: 63 SLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + A+E H ++LIHDD+ MD +RRG PTVH ++D T I+AG+ Sbjct: 59 DAIRHGSSKDVMPAALALEVTHTFTLIHDDI--MDGDSLRRGVPTVHTKWDMPTGILAGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178 L AFE I K +++ +L+ + GQ D+ E + E + Sbjct: 117 VLYARAFEFICQSKADEGPKVQAVALLARACA----DICEGQHQDMSFEHRADVTEEEYM 172 Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + KTG L A G +A + + L FG N GI FQ+ DDL+D Sbjct: 173 AMVAKKTGVLYAAAAAIGGTLAGGNPEQIRALYQFGLNTGIAFQIQDDLIDL 224 >gi|187929506|ref|YP_001899993.1| Polyprenyl synthetase [Ralstonia pickettii 12J] gi|309781717|ref|ZP_07676450.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA] gi|187726396|gb|ACD27561.1| Polyprenyl synthetase [Ralstonia pickettii 12J] gi|308919358|gb|EFP65022.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA] Length = 303 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 80/236 (33%), Positives = 123/236 (52%), Gaps = 9/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 + R + L+ L +T RL +A+RYA LG GK++R L Sbjct: 2 SDFAQWMASVVARTEVALERALP-----AETVSPQRLHAAMRYATLGAGKRVRPLLAHAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +L + + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+ Sbjct: 57 GALGDASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179 L T AF +++ ++ R+ LM L G QGM GGQ +D+Q I + ++ Sbjct: 117 ALQTQAFIVLAEQGA-VRPATRAVLMGELARASGSQGMAGGQAIDLQSVGIALSQDELEA 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +MKTGAL+ + GA+ A + E + + +G+ FQ+ DD+LD D Sbjct: 176 MHRMKTGALLRASLRMGALCAEVNAAALEHVDAYAGAVGLAFQVVDDILDVTADTA 231 >gi|21674031|ref|NP_662096.1| polyprenyl synthetase [Chlorobium tepidum TLS] gi|21647180|gb|AAM72438.1| polyprenyl synthetase [Chlorobium tepidum TLS] Length = 324 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 21/237 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59 + + +L++ +R T+L N + RY L GK+IR LV Sbjct: 6 VTFSVTEELKQFQERYKTVLHS------------SNSLVDKVTRYVLRQQGKQIRPTLVI 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + H R +E +H +LIHDD+ +D +RRG P+++ + +++ Sbjct: 54 LAAKVCGGVHDVTYRGAIMVELLHSATLIHDDV--VDGAEMRRGIPSINALWKNKISVLI 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ LL+ K ++ S+ + ++ L Q+ + I E Sbjct: 112 GDYLLSKGLLYSLENKDYRSLHLVSEAVRRMSEGEIL------QIQKTRSLDITEEDYLS 165 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTG+L+ +C GA + S++E L+ +GE LG+ FQ+ DDLLD D K Sbjct: 166 VIADKTGSLIATSCAIGAASSTDSEDEIASLKSYGEFLGLAFQIRDDLLDYTGDSKK 222 >gi|50085991|ref|YP_047501.1| geranyltranstransferase [Acinetobacter sp. ADP1] gi|49531967|emb|CAG69679.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter sp. ADP1] Length = 302 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 88/239 (36%), Positives = 129/239 (53%), Gaps = 18/239 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66 LQ +RI L L + L SA+ + + LGGK++R L AS+ N Sbjct: 12 LQAAQERIQQDLTTALDAFDL------PEPLKSAVYHTVMLGGKRVRPALCYAVASMEKN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N+ A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L + Sbjct: 66 PNYAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182 AFE++ S ++++ + ++L M+ GQ+LD+Q E ID+ Q+ I + Sbjct: 126 AFEVLGSRLFDQQNSVDASIVLRQMQILATASSKMVCGQVLDLQAEGKEIDQEQLENIHR 185 Query: 183 MKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 KTGAL+ A GA + + Q LR FG+ +G+ FQ+ DD+LD E L K Sbjct: 186 NKTGALIQAALMMGAVTLFSGMDQA-IPHLRQFGQRIGLAFQVQDDILDIISSTETLGK 243 >gi|169632576|ref|YP_001706312.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii SDF] gi|169151368|emb|CAP00088.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) [Acinetobacter baumannii] Length = 303 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66 L++ +RI DLL A+ + L SA+ +A+ LGGK++R L ASL N Sbjct: 12 LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L + Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125 Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 AFE++ S + + ++L M+ GQ+LD+Q E I + ++ I Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185 Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA+ + + +LR +G+ +G+ FQ+ DD+LD Sbjct: 186 RNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITS 237 >gi|163761016|ref|ZP_02168094.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica DFL-43] gi|162281797|gb|EDQ32090.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica DFL-43] Length = 338 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A++F + +++ ++E +H +L+HDD+ +D +RRG+ T Sbjct: 57 GGKRLRPMLTLASATMFGYSGDFHIKLATSVEFMHTATLLHDDV--VDESDLRRGRSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+++ + + + +LS + +G + Q+ + Sbjct: 115 MIWGNQASVLVGDFLLGQAFKMMVEVGS-----LEALDVLSTAAAVIAEGEVL-QLSVAK 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + KT AL ACE G I+A S+ E+ LR +G NLG+ FQL DD+L Sbjct: 169 NMETTEDDYLSVIRAKTAALFSAACEVGPIIAETSKAERSALRSYGINLGLAFQLIDDVL 228 Query: 229 DCEE---DLPK 236 D DL K Sbjct: 229 DYGGSANDLGK 239 >gi|254262303|emb|CAZ90627.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter pulveris] Length = 312 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 12/227 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66 +LQ K I+ LD LL Q T+ ND + A+R A L GK+IR L+ A Sbjct: 14 ELQSMRKTIENRLDSLLPQ------TEENDLVTQAMRDATLAPGKRIRPLLMLLAARDLG 67 Query: 67 --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 H L + A+E IH SL DD+P MDN +RRG+PT+H ++ E AI+A LL Sbjct: 68 CAPAHPGLLDLACAVEMIHAASLTLDDIPCMDNAAMRRGRPTIHRKFGENVAILAAVALL 127 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182 + AF ++SS + L D R+Q + L+ +G QG++ GQ D+++ E + Sbjct: 128 SKAFGVVSSAE-GLSDAGRAQAVSELSAAVGTQGLVKGQYQDLREGCEPRSTEAIHTTND 186 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 +KTG L + + AI A+AS + RLR F + G FQL DDL+D Sbjct: 187 LKTGVLFSASLQLAAIAANASVAARNRLRSFALDFGQAFQLLDDLID 233 >gi|213971072|ref|ZP_03399192.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato T1] gi|301384205|ref|ZP_07232623.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato Max13] gi|302060871|ref|ZP_07252412.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato K40] gi|302132864|ref|ZP_07258854.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924180|gb|EEB57755.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato T1] gi|331018359|gb|EGH98415.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 322 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDIRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS I +G + Q+ I Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMKILSKATRIIAEGEVL-QLSKI 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A + AS+ + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|302188811|ref|ZP_07265484.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. syringae 642] Length = 322 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS I +G + Q+ I Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MDVMKILSKATRIIAEGEVL-QLSKI 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A + +AS+ + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNASEAQSEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|297584422|ref|YP_003700202.1| heptaprenyl diphosphate synthase component II [Bacillus selenitireducens MLS10] gi|297142879|gb|ADH99636.1| heptaprenyl diphosphate synthase component II [Bacillus selenitireducens MLS10] Length = 323 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 11/232 (4%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 KL E + + + + ++ +H + ++ GGK+IR V A + Sbjct: 2 KLSEIYLYLKQDISKIEKELEMSIEARHPVLVKASSHLLKAGGKRIRPVFVLLSAQFGDY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 V +E IH SL+HDD+ +D+ +RRGK T+ ++D A+ G+ + A Sbjct: 62 KLDKVKHVAVPLEMIHMGSLVHDDV--IDDAELRRGKKTIKAEWDNRVAMYTGDYMFAKA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 EI S N++ +LS G + Q+ + + K KT Sbjct: 120 IEIASKSG-----NMKLHEILSDAMVEMSIGEVE-QIKEQFNPDQHLRIYLRRIKRKTAL 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 L+ +CE GA++A A + + +L+ +G G+ FQ+ DD+LD +L K Sbjct: 174 LISVSCELGALIAGADETTQMKLKRYGYFTGMAFQITDDILDFVGTEKELGK 225 >gi|120602763|ref|YP_967163.1| polyprenyl synthetase [Desulfovibrio vulgaris DP4] gi|120562992|gb|ABM28736.1| farnesyl-diphosphate synthase [Desulfovibrio vulgaris DP4] gi|311233551|gb|ADP86405.1| Farnesyltranstransferase [Desulfovibrio vulgaris RCH1] Length = 299 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 85/239 (35%), Positives = 135/239 (56%), Gaps = 10/239 (4%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 L ++L+ + R++ L L RL SA+ Y+LL GGK++R L Sbjct: 4 TADLKARLRMQAARVEGYLATCLA------GRGIPPRLQSAMEYSLLAGGKRLRPVLCLS 57 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + ++ ++ + AAIE IH YSLIHDDLP+MD+ +RRG+P+ H Q+DE TAI+AG Sbjct: 58 TAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPAMDDDDLRRGRPSNHRQFDEATAILAG 117 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177 +GLLT AF++++S + + ++ G GM+GGQ LD+ + ID + Sbjct: 118 DGLLTDAFDLMASVGGGIPAGHVLAALREVSSAAGSSGMVGGQALDMDYTGRDDIDLAAL 177 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + MKTGAL+ +C +GA++ A + E++ +G +G FQ+ DD+LD D + Sbjct: 178 RTMHAMKTGALIRCSCVAGALLGGAPASAVEQVAGYGAAIGAAFQIVDDILDETGDEAQ 236 >gi|294651287|ref|ZP_06728611.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194] gi|292822816|gb|EFF81695.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194] Length = 303 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 16/233 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66 L++ +RI DLL A+ + L +A+ +A+ LGGK++R L ASL N Sbjct: 12 LKQAQQRIQQ---DLLTALAAF---SIPEPLKAAVHHAVMLGGKRVRPALCYATASLKPN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L + Sbjct: 66 HNFAAVRRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVVFGEDTALLAGDILQSM 125 Query: 127 AFEIISS-PKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 AFEI++S + + ++L M+ GQ+LD+Q E +D+T++ I Sbjct: 126 AFEILASRLFDEQGQGTDAAIVLKQVQILATASSKMVAGQVLDLQAEGKQVDQTELENIH 185 Query: 182 KMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA + A +LR FG+ +G+ FQ+ DD+LD Sbjct: 186 RNKTGALIQAAIMMGAVTVFAGTDPA-IPKLRQFGQTIGLAFQVQDDILDITA 237 >gi|157150564|ref|YP_001449997.1| geranyltranstransferase [Streptococcus gordonii str. Challis substr. CH1] gi|157075358|gb|ABV10041.1| geranyltranstransferase [Streptococcus gordonii str. Challis substr. CH1] Length = 291 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 80/234 (34%), Positives = 127/234 (54%), Gaps = 15/234 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 +E ++ID + D Q A +D L+ +I Y++ GGK+IR L+ E F++ Sbjct: 4 EEKIRQIDQTIIDYYSQQA------VSDSLVESILYSVQAGGKRIRPLLLLELVEAFDLP 57 Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 58 LQPAHFQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDSLFLDP 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 +I+ +L + L++ L+ G GM+GGQ LD++ E +D ++ I KT Sbjct: 118 CGLIAVA--ELPSQAKVNLIMELSQAAGTFGMVGGQALDMEGEGCQLDLKELKAIHAHKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 G L+ F + ++A + + +LR GE +G+ FQ+ DD+LD E+L K Sbjct: 176 GKLLAFPFVAAGLLAQVDEGVQAKLRRIGELIGLAFQVRDDILDVTASFEELGK 229 >gi|330508369|ref|YP_004384797.1| bifunctional short chain isoprenyl diphosphate synthase [Methanosaeta concilii GP-6] gi|328929177|gb|AEB68979.1| bifunctional short chain isoprenyl diphosphate synthase [Methanosaeta concilii GP-6] Length = 319 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 17/230 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 + +L+ + + ++ LL H L A R+ + GGK++R ++ A Sbjct: 1 MEEELERRAALVTATIEKLL-------PVMHPRGLYEASRHLVDSGGKRLRPSMLLLAAE 53 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L +IE +H ++LIHDD+ MDN +RRG+P VH + + AI+AG+ L Sbjct: 54 AAGGEALALAPAAVSIELVHNFTLIHDDI--MDNADVRRGRPAVHKIWGQSGAILAGDTL 111 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMI 180 + AF+++ + + + MLS T + GQ LD++ E + E + + Sbjct: 112 YSKAFQVLGMTAASPERILGAMNMLSRTCTA----ICEGQWLDMEFESKDRVTENEYMEM 167 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 + KTG L + G ++A AS L FG G+ FQL DD++D Sbjct: 168 IEKKTGVLYGASAGMGGLLAGASPEVVRALDEFGRLTGMGFQLQDDVIDL 217 >gi|237801840|ref|ZP_04590301.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024698|gb|EGI04754.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 319 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDIRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS I +G + Q+ I Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMKILSKATRIIAEGEVL-QLSKI 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A + AS+ + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|239995268|ref|ZP_04715792.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii ATCC 27126] Length = 324 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 96/187 (51%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A +++ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLTVLSARAMGIDNNDHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ S K +R +LS N +G + Q+++ Sbjct: 101 AIFGNQASVLVGDFLYTRSFQMMVSLK-----RMRVMEILSEATNQIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + F + KT L A + A++ +++ + ++ +G++LG FQLADD+L Sbjct: 155 DPSTTEARYFDVIYGKTARLFEAATQLAAVLTDQNEHIEHAMQEYGKHLGTAFQLADDIL 214 Query: 229 DCEEDLP 235 D D Sbjct: 215 DYMADSE 221 >gi|28868024|ref|NP_790643.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato str. DC3000] gi|28851260|gb|AAO54338.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato str. DC3000] gi|330878952|gb|EGH13101.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966393|gb|EGH66653.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 322 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDIRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS I +G + Q+ I Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMKILSKATRIIAEGEVL-QLSKI 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A + AS+ + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|311087355|gb|ADP67435.1| geranyltranstransferase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 282 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 79/228 (34%), Positives = 130/228 (57%), Gaps = 6/228 (2%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R ++ L T + + Q + LL A++Y++ G K++RS L+ +F VN T Sbjct: 8 ERYKHRINQKLFYTLNQLPFQKSS-LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + AIE IH YSLIHDDLP MDN RRGK + H++Y E T+++AG+ L + AF I+S Sbjct: 67 DVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAFNILS 126 Query: 133 SPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189 + N+ R +++ L+++IG GM GQ LD++ E ++ +++ +I KT LM Sbjct: 127 NSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM 186 Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + + S++ L F ++G+ FQ+ DD+LD ++D K Sbjct: 187 RSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVK 234 >gi|311086191|gb|ADP66273.1| geranyltranstransferase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311087854|gb|ADP67933.1| geranyltranstransferase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 301 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 79/228 (34%), Positives = 130/228 (57%), Gaps = 6/228 (2%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R ++ L T + + Q + LL A++Y++ G K++RS L+ +F VN T Sbjct: 8 ERYKHRINQKLFYTLNQLPFQKSS-LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + AIE IH YSLIHDDLP MDN RRGK + H++Y E T+++AG+ L + AF I+S Sbjct: 67 DVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAFNILS 126 Query: 133 SPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189 + N+ R +++ L+++IG GM GQ LD++ E ++ +++ +I KT LM Sbjct: 127 NSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM 186 Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + + S++ L F ++G+ FQ+ DD+LD ++D K Sbjct: 187 RSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVK 234 >gi|219682370|ref|YP_002468754.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219622103|gb|ACL30259.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086767|gb|ADP66848.1| geranyltranstransferase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 282 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 79/228 (34%), Positives = 130/228 (57%), Gaps = 6/228 (2%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R ++ L T + + Q + LL A++Y++ G K++RS L+ +F VN T Sbjct: 8 ERYKHRINQKLFYTLNQLPFQKSS-LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + AIE IH YSLIHDDLP MDN RRGK + H++Y E T+++AG+ L + AF I+S Sbjct: 67 DVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAFNILS 126 Query: 133 SPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189 + N+ R +++ L+++IG GM GQ LD++ E ++ +++ +I KT LM Sbjct: 127 NSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM 186 Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + + S++ L F ++G+ FQ+ DD+LD ++D K Sbjct: 187 RSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVK 234 >gi|15617063|ref|NP_240276.1| geranyltranstransferase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681815|ref|YP_002468201.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471517|ref|ZP_05635516.1| geranyltranstransferase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11386920|sp|P57537|ISPA_BUCAI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Geranyltranstransferase gi|25403631|pir||B84984 geranyltranstransferase (EC 2.5.1.10) [imported] - Buchnera sp. (strain APS) gi|10039128|dbj|BAB13162.1| geranyltranstransferase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624658|gb|ACL30813.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 282 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 79/228 (34%), Positives = 130/228 (57%), Gaps = 6/228 (2%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72 +R ++ L T + + Q + LL A++Y++ G K++RS L+ +F VN T Sbjct: 8 ERYKHRINQKLFYTLNQLPFQKSS-LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTL 66 Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132 + AIE IH YSLIHDDLP MDN RRGK + H++Y E T+++AG+ L + AF I+S Sbjct: 67 DVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAFNILS 126 Query: 133 SPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189 + N+ R +++ L+++IG GM GQ LD++ E ++ +++ +I KT LM Sbjct: 127 NSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM 186 Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 A + + S++ L F ++G+ FQ+ DD+LD ++D K Sbjct: 187 RSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVK 234 >gi|299538563|ref|ZP_07051846.1| heptaprenyl diphosphate synthase component II [Lysinibacillus fusiformis ZC1] gi|298726150|gb|EFI66742.1| heptaprenyl diphosphate synthase component II [Lysinibacillus fusiformis ZC1] Length = 324 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 18/235 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L S L+ + + I+ L+ + ++S++ + LL A GGK+IR V A Sbjct: 9 LYSDLKSDIEIIEQELEKAV-DSSSYLINDASLHLLQA------GGKRIRPIFVLLGAKF 61 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + + V +E IH SL+HDD+ +D+ +RRG+PTV Q++ A+ G+ + Sbjct: 62 GDYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVKSQWNNRVAMYTGDFIF 119 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 A E I+ + L I ++ M+ + + + Q+ D F K K Sbjct: 120 ARALEYITKLEDPLVHQILARTMVEICNGEVI------QIEDKFRLDQGLKDYFRRIKRK 173 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 T L+ +CE GA+ A L+ FG +G+ FQ+ DD+LD +L K Sbjct: 174 TALLISSSCELGAVAAGVDTKTVRHLKRFGYFVGMSFQIIDDVLDIMATDKELGK 228 >gi|149927152|ref|ZP_01915409.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Limnobacter sp. MED105] gi|149824091|gb|EDM83312.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Limnobacter sp. MED105] Length = 330 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 21/236 (8%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 S + + +++D ++ L S + Q +D +++A GGK++R LV A Sbjct: 13 SPIAADMQQLDQVIRTSLHSEVS-LINQISDYIINA------GGKRLRPALVILTARALG 65 Query: 67 VNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + A +E IH +L+HDD+ +D +RRG+ T + +Y A++ G+ L Sbjct: 66 ATQQQMQQTIELAAIVEFIHTATLLHDDV--VDESDMRRGRLTANAEYGNSAAVLVGDFL 123 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + +F+++ + +LS N +G + Q+L+ +D + E + + Sbjct: 124 YSRSFQMMVKIGL-----MDVMDVLSEATNTIAEGEVL-QLLNCKDPDVTEARYMQVIDF 177 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 KT L +C I+ S+ L FG +G FQL DD+LD + L K Sbjct: 178 KTAKLFEASCRLAGIVTGQSKEAITNLGRFGAEVGSAFQLIDDVLDYAGESAALGK 233 >gi|118595179|ref|ZP_01552526.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Methylophilales bacterium HTCC2181] gi|118440957|gb|EAV47584.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Methylophilales bacterium HTCC2181] Length = 296 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 78/236 (33%), Positives = 135/236 (57%), Gaps = 14/236 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66 + + K+I+ L + + L + YA+L GGK++RS L+ ++ + Sbjct: 9 WISHHQKKINLELSHFFKEIDQSL-------LKNVCEYAVLNGGKRLRSLLIYAISNYSD 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A+E IH YSL+HDDLPSMD+ +RRGKP+ HI+YDE AI+ G+ L + Sbjct: 62 GYDTHFNCLALAVEMIHAYSLVHDDLPSMDDDELRRGKPSCHIKYDEAQAILGGDALQSL 121 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMK 184 AFE++SS K ++D ++ +++ L+ +IGL GM GQ +D ++ ++ + +Q +K Sbjct: 122 AFELLSSDKFNVQDKVKIKVLNMLSQSIGLHGMALGQSIDIDSANKELNLKSLDHLQALK 181 Query: 185 TGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 TGAL+ +C +++ +Q ++ + G+ +G I+Q+ DD+LD E D L K Sbjct: 182 TGALIEASCVMSYVISDKYNQKHEKDIASIGKLIGSIYQITDDILDFESDTNTLGK 237 >gi|212638936|ref|YP_002315456.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus WK1] gi|212560416|gb|ACJ33471.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus WK1] Length = 320 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 15/229 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 + S L + +I+ L L +Q + + + + LL A GGK+IR V Sbjct: 5 AMYSFLNGDLNKIEEQLK-LTVQASDPLVNEASLHLLEA------GGKRIRPVFVLLGGQ 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + RV A+E IH SL+HDD+ +D +RRGK T+ ++ + A+ G+ L Sbjct: 58 FGTYHFEKMKRVAVALELIHMASLVHDDV--IDGAMLRRGKETIQAKWGDRFAMYVGDYL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 A E + + I + ++ + Q+ D + + K Sbjct: 116 FARALEQMCEIDDPVAHRILANTIVEVCRGEI------EQISDKYRFDQNLRRYLQRIKR 169 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L+ +C+ GA++A A + ++L FG +G+ FQ+ DD+LD Sbjct: 170 KTALLIAASCQLGAVVAGAPETIHKKLYWFGYYVGMSFQITDDILDFIG 218 >gi|291531063|emb|CBK96648.1| farnesyl-diphosphate synthase [Eubacterium siraeum 70/3] Length = 302 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 70/238 (29%), Positives = 112/238 (47%), Gaps = 10/238 (4%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61 G + +E + L + + L A Y+L GGK+IR L E Sbjct: 13 GEFDAVFREYRAIFEKQLRTVCDSFCDNGAKYKA--LYDAASYSLEAGGKRIRPVLAFEM 70 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + A+ A+E IH +SLIHDDLP MD+ +RRG+P+ H + E A++AG+ Sbjct: 71 CRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDDDDMRRGRPSCHKAHGEAVALLAGD 130 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L YA + I + L ++ ++ L GM+ GQ +D +F + + Sbjct: 131 ALSAYAGKYICD--SNLSAEKKTAMIKELYDR--TLGMIEGQTIDTDGKFDTLDGLLSMY 186 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 +MKT L+ A G I A A + + R + ++G+ FQ+ DD+LD E+L K Sbjct: 187 EMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILDVTSTVEELGK 244 >gi|291277196|ref|YP_003516968.1| geranyltranstransferase [Helicobacter mustelae 12198] gi|290964390|emb|CBG40240.1| geranyltranstransferase [Helicobacter mustelae 12198] Length = 287 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 118/214 (55%), Gaps = 7/214 (3%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE--CASLFNVNHLTALRVGA 77 ++ L M+ H + GGK+ R L+ C+ F++ L Sbjct: 10 FEEFLQSYPIEMEGFHPVFAKAFWEMLKNGGKRFRPALLFAVVCSQNFSLAKNAFLP-AL 68 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+EC+H YSLIHDDLP MD+ +RRG PT+H YDEVTA + G+GL T++F +++ K Sbjct: 69 ALECLHTYSLIHDDLPCMDDASLRRGYPTLHRSYDEVTATLVGDGLNTFSFYLLT--KAH 126 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACES 195 L + R +L+ L+H G+ GM+ GQ +D +++ ++ +++ I KT L+ + Sbjct: 127 LDPSTRLRLIEMLSHYGGIGGMVIGQAMDCYFENQHLEIEKLYAIHLNKTAKLIATSLCM 186 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 G ++A+ E L FG +LGI FQ+ DD++D Sbjct: 187 GGVIANLPDGELRNLWDFGMDLGIFFQVRDDIID 220 >gi|312880186|ref|ZP_07739986.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260] gi|310783477|gb|EFQ23875.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260] Length = 303 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 118/244 (48%), Gaps = 8/244 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59 MN +L+ + ++D L + RL A+ Y+L GGK+IR L Sbjct: 1 MNPERQQRLKNFLEERRLWIEDALSSQCEVPWEEVPPRLQEAMVYSLQAGGKRIRPVLCL 60 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + A+ + A E IH SLIHDDLP MD+ +RRGKPT H + E A++A Sbjct: 61 AAAEQCGLAPRRAMPLALAHEWIHTASLIHDDLPCMDDDDLRRGKPTNHRVFGEALALLA 120 Query: 120 GNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDET 175 G+ LL +AFE + +L + + + +G +G+ GGQ D Q + D Sbjct: 121 GDALLAWAFEFALEGLCREELPAPQILKALQTFARAVGPRGICGGQVRDTDPQSQSEDPE 180 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233 V++I + KT L+ A GA++A A + +G +LG FQ+ DD+LD D Sbjct: 181 DVWLIARTKTSVLLESALVGGALLAGAEPSVVSAYGHYGTHLGTAFQIVDDVLDVLGDSA 240 Query: 234 -LPK 236 L K Sbjct: 241 TLGK 244 >gi|262282720|ref|ZP_06060488.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA] gi|262262011|gb|EEY80709.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA] Length = 291 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 129/234 (55%), Gaps = 15/234 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 +E ++ID + D + A +D L+ +I Y++ GGK+IR L+ E F + Sbjct: 4 EEKIRQIDQTIIDYYSKKA------VSDSLVESILYSVQAGGKRIRPLLLLELVEAFGLP 57 Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +A +V +A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 58 LQSAHFQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDSLFLDP 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +I+ +L ++ L++ L+ G GM+GGQ LD++ E +D ++ I KT Sbjct: 118 YGLIAVA--ELPSQVKVNLIMELSQAAGTFGMVGGQALDMEGEGCQLDLKELQAIHAHKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 G L+ F + ++ + + +LR GE +G+ FQ+ DD+LD E+L K Sbjct: 176 GKLLAFPFVAAGLLVQVEEGVQAKLRKIGELIGLAFQVRDDILDVTASFEELGK 229 >gi|310815063|ref|YP_003963027.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25] gi|308753798|gb|ADO41727.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25] Length = 325 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 14/218 (6%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74 +++ L + A+ Q + L+ A GGK++R L A L + + Sbjct: 17 KVNETLHSYMQSDAAPRIRQVSAHLIDA------GGKRLRPMLTVAAARLCGYDGPHHIH 70 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 + A +E IH +L+HDD+ +D+ RRG+PT ++ +D +++++ G+ L + AF++++ Sbjct: 71 LAATVEFIHTATLLHDDV--VDDSKQRRGRPTANLLWDNMSSVLVGDYLFSRAFQLMTIT 128 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 + + L+ +G + Q+ +D I + KT AL A Sbjct: 129 GS-----MPILAALADASATIAEGEVL-QLSTARDLSATPETYIRIARGKTAALFSAATR 182 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 GA++A + + +G+ LGI FQ+ADDLLD Sbjct: 183 VGAMLAEPGDAIVQAMHDYGDALGIAFQIADDLLDYTG 220 >gi|254449834|ref|ZP_05063271.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus 238] gi|198264240|gb|EDY88510.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus 238] Length = 332 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 14/230 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L + L + ++ ++ D + + + L+ A GGK++R L A Sbjct: 12 DRLAAALTDEMDAVNVLIRDRMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAA 65 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ Sbjct: 66 KMCGYGGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNTSSVLVGDY 123 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L +F+++ + +R +L+ +G + Q+ D E I + Sbjct: 124 LFARSFQLMVETGS-----LRVLDILANASATIAEGEVL-QLTAASDLATSEAVYLQIVR 177 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT AL A E G ++A + + L +G+ LGI FQ+ DDLLD Sbjct: 178 GKTAALFSAALEVGGVIAQQDEALVKALYDYGDALGIGFQIVDDLLDYSG 227 >gi|239831276|ref|ZP_04679605.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] gi|239823543|gb|EEQ95111.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301] Length = 356 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ A+E +H +L+HDD+ +D +RRGK T Sbjct: 75 GGKRLRPMMTLAAARMFGYEGDGHVRLATAVEFMHTATLLHDDV--VDESDLRRGKSTAR 132 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+++ + + + +L+ + ++ +G + Q+ + Sbjct: 133 MIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASVIAEGEVM-QLAAAK 186 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++ LR +G NLG+ FQL DD L Sbjct: 187 NMETTEDEYLAVIKAKTAALFSAAGEVGPIIAGARPADRVALRDYGLNLGLAFQLVDDAL 246 Query: 229 DC---EEDLPK 236 D DL K Sbjct: 247 DYGGSAADLGK 257 >gi|254372879|ref|ZP_04988368.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp. novicida GA99-3549] gi|151570606|gb|EDN36260.1| octaprenyl-diphosphate synthase [Francisella novicida GA99-3549] Length = 325 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 18/236 (7%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66 + K I ++ + + + + L++ I + ++ GGK++R LV A N Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L + Sbjct: 62 YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ S DN++ +L+ N +G + Q+L+ ++ + E + + KT Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173 Query: 187 ALMCFACESGAIMA---HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 L ACE +++ + R++ +G LG FQ+ADD+LD D L K Sbjct: 174 KLFEAACELAGVISLDKQGYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGK 229 >gi|89894978|ref|YP_518465.1| hypothetical protein DSY2232 [Desulfitobacterium hafniense Y51] gi|89334426|dbj|BAE84021.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 322 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 18/235 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L +++ + +R++ L + +T + Q +LL A GGK++R Sbjct: 6 LFNQINSDLQRVEKELHAYI-KTDFPILDQSAVQLLEA------GGKRLRPAFTLLAGKF 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + L V A+E IH +L+HDD+ +D RRG+PTV ++ V +I G+ LL Sbjct: 59 YGYPIDRLLPVAMALELIHMATLVHDDV--VDASMTRRGRPTVKAKWGNVVSIATGDYLL 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 A E+++ I +++ + ++ Q+ D + Q + K K Sbjct: 117 AKALELLAQINHPEVSKILAEVSVEMSQGEI------QQIKASNDVNQNLKQYYYRIKRK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 T L+ +C+ GA+++ A + E L +G LG+ FQ+ DD+LD +L K Sbjct: 171 TAMLISASCKLGALVSAAPRREVWALGAYGHALGMAFQIVDDVLDVTAEASELGK 225 >gi|167043297|gb|ABZ08002.1| putative polyprenyl synthetase [uncultured marine crenarchaeote HF4000_ANIW141M18] Length = 283 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 15/225 (6%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L K K+I+ +LD S ++ ++YAL GGK+IR ++ + Sbjct: 11 LLEKYSAYIKKINNVLD-------SELELYTESEFKEPLKYALDGGKRIRPIILLLSSEC 63 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 L AIE +H S+IHDD+ +DN +RR K HI+Y +++ G+ +L Sbjct: 64 VGEIDDNTLAAACAIEFLHTESVIHDDI--IDNETLRRQKDPFHIKYGYNISVLTGDFVL 121 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 I S +N R L+ T + +G + L+ E + + + K Sbjct: 122 GLILNIASRI-----NNPRVTKNLATTAMMMSEGEVIESRLE-ASEDVTFDDYLKVIEYK 175 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T A GAI++ ++ E E L +G+N+GI +Q+ DDLLD Sbjct: 176 TATAFETASRLGAIISEGTEEEIESLADYGKNIGIAYQIRDDLLD 220 >gi|223043139|ref|ZP_03613186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Staphylococcus capitis SK14] gi|222443350|gb|EEE49448.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Staphylococcus capitis SK14] Length = 288 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 84/223 (37%), Positives = 128/223 (57%), Gaps = 5/223 (2%) Query: 18 TILDDLLLQTASHMQTQH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75 +++++ + H N L ++ Y+L GGK+IR L+ ++ N ++ + Sbjct: 3 NLIEEVNTNLKQAIPESHLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLNEDYHKGFQS 62 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A+E IH YSLIHDDLP+MD+ RRGK T H Y E AI+AG+ LLT AFE++S+ Sbjct: 63 ALALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDD 122 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFAC 193 ++DN++ +++ L+ G GM+GGQ LD+Q E +D + I K KTGAL+ FA Sbjct: 123 L-IEDNVKVKVLQRLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIHKAKTGALLTFAV 181 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +A Q L F ++LG++FQ+ DDLLD D K Sbjct: 182 MAAVDIAQVDQKTSHNLNEFSKHLGLMFQIKDDLLDVYGDEKK 224 >gi|145589885|ref|YP_001156482.1| polyprenyl synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048291|gb|ABP34918.1| farnesyl-diphosphate synthase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 304 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 91/242 (37%), Positives = 129/242 (53%), Gaps = 18/242 (7%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61 + +S+R ++ LD LL + RL A+RYA GG K+IR LV Sbjct: 5 FQFQDWVIAHSQRAESALDRLLDSEKTI-----PHRLHEAMRYAAQGGGKRIRPLLVYAA 59 Query: 62 ASLFNVNHLTA--------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113 L N + A AIECIH YSL+HDDLP MD+ +RRG+PTVH +DE Sbjct: 60 GQLGNSINEQADQEKNAALDAAAVAIECIHAYSLVHDDLPCMDDDDLRRGRPTVHKAFDE 119 Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EF 171 TA++ G+ L T AFEI+++ K NIR ++ +L G +GM GGQ +D++ + Sbjct: 120 ATALLVGDALQTRAFEILANAK--CDANIRLAMISALAAASGSRGMAGGQAIDLESVGKK 177 Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 +D + + MKTGAL+ A G I A S + +L + E LG+ FQ+ DD+LD Sbjct: 178 LDLDGLKQMHAMKTGALLSCATALGGIAAGLSPAQMTQLLVYSEALGLAFQVVDDVLDAT 237 Query: 232 ED 233 D Sbjct: 238 AD 239 >gi|17546941|ref|NP_520343.1| geranyltranstransferase [Ralstonia solanacearum GMI1000] gi|17429241|emb|CAD15929.1| probable geranyltranstransferase (farnesyl-diphosphate synthase) protein [Ralstonia solanacearum GMI1000] Length = 299 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 76/236 (32%), Positives = 120/236 (50%), Gaps = 9/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 + R ++ L+ L ++ RL +A+RYA LG GK++R L Sbjct: 2 SDFAHWMASVVARTESALERALP-----GESVAPQRLHAAMRYATLGAGKRVRPLLAHAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +L + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+ Sbjct: 57 GALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF ++ + R+ L+ L G GM GGQ +D+Q + + + Sbjct: 117 ALQTQAFIALAELGA-VSPATRAGLVGELARASGSLGMAGGQAIDLQSVGVALSQDALET 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +MKTGAL+ + GA+ A + E++ + +G+ FQ+ DD+LD D Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVGLAFQVVDDILDVTADTA 231 >gi|258406530|ref|YP_003199272.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692] gi|257798757|gb|ACV69694.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692] Length = 322 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 16/222 (7%) Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 ++D + + + ++ + L GGK++R L A F + Sbjct: 14 AIEDHIQSVLGEL----DPLIVPVASHVLGAGGKRLRPILCVLTAEAFGYRDKEVYPLAT 69 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 A+E +H +LIHDD+ +D +RRG+P+ H+ + ++AG+ LL A + I+ Sbjct: 70 ALELLHSATLIHDDI--LDGAALRRGQPSAHLAFGVQETVLAGDALLAMANKCIAGYGQP 127 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 I S+ +++ + + ++ +++ + E F I KT L+ +CE GA Sbjct: 128 ELMRIASEAIMATANGEIM------EIAQLREPRLSEEDYFQIITGKTAVLIQASCECGA 181 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 ++A A +++ + G NLGI FQL DD LD ED K Sbjct: 182 VLAGAKGPQRQAAQDLGRNLGIAFQLVDDALDYTSAVEDSGK 223 >gi|148269899|ref|YP_001244359.1| polyprenyl synthetase [Thermotoga petrophila RKU-1] gi|281412220|ref|YP_003346299.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10] gi|61657360|emb|CAI44277.1| geranyltranstransferase [Thermotoga naphthophila RKU-10] gi|147735443|gb|ABQ46783.1| farnesyl-diphosphate synthase [Thermotoga petrophila RKU-1] gi|281373323|gb|ADA66885.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10] Length = 272 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 16/226 (7%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70 ++++ + ++L + A+ Y A +GGK+IR LV V Sbjct: 2 KKEKVEERIREILRPGWDLLTE-------EAMLYSATVGGKRIRPLLVLTLGEDLGVEEE 54 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 L V A+E H SLIHDDLP +DN RRGKP+ H Y E A++AG+GL AF Sbjct: 55 KLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKPSCHRTYGEDIALLAGDGLFFLAFSQ 114 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 IS S+ L + + ++ I + V + KTGAL Sbjct: 115 ISKIGNSKIFEEFSETAYKLLLGEAMDVEFERRKME-----ISQEMVERMYAFKTGALFA 169 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 F + I+ + + +++ GE G+ FQ+ DDL D K Sbjct: 170 FCFSAPFIL---KEKDHTKMKLLGEKFGVAFQIYDDLKDILGSFEK 212 >gi|148265763|ref|YP_001232469.1| polyprenyl synthetase [Geobacter uraniireducens Rf4] gi|146399263|gb|ABQ27896.1| Polyprenyl synthetase [Geobacter uraniireducens Rf4] Length = 322 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 13/232 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 ++ I L ++ LQ +Q+ + Y L GGK+IR L+ A L Sbjct: 1 MEAALALIGEDLKNVELQFKKDLQSDVP-LIRKVGEYVLSSGGKRIRPALLLLSAKLCGY 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + + + IE IH +L+HDD+ +DN +RRG + + + +++ G+ L + + Sbjct: 60 HGDRHVPLASVIEFIHTATLLHDDV--VDNANLRRGLASANTLWGNEASVLVGDFLFSKS 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F ++ + ++ +LS I +G + Q++ D + + + K KT Sbjct: 118 FSLMVADG-----DLNVLKVLSGATTIIAEGEVL-QLVCTSDLDVTTERYIEVVKSKTAI 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 L+ AC+SGAI+ AS + L+ FG LGI FQL DD LD EE K Sbjct: 172 LLSAACQSGAILGKASSEREVALQNFGMELGIAFQLVDDTLDYVASEEQFGK 223 >gi|126179759|ref|YP_001047724.1| geranyltranstransferase [Methanoculleus marisnigri JR1] gi|125862553|gb|ABN57742.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase [Methanoculleus marisnigri JR1] Length = 321 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 109/230 (47%), Gaps = 17/230 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L L+ N++RID +L H D ++ L GGK++R +V A Sbjct: 4 LEDYLEMNAERIDKVLHRYF-------GDVHGDLFRASAHLLLAGGKRLRPAVVILAADA 56 Query: 65 F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + ++E H ++LIHDD+ MD RRG PTVH +DE TAI+AG+ L Sbjct: 57 VRKGSSDDLIPAALSLELTHNFTLIHDDI--MDGDAARRGVPTVHTIWDEPTAILAGDVL 114 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMI 180 AFE I + IR+ ML+ T + GQ +D+ E + E + + Sbjct: 115 YAKAFEFICFSEAADAAKIRAVKMLART----CTDICEGQSMDMAFEKRHDVSEVEYLEM 170 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 KTG L + G I+A AS + + L +G N GI FQ+ DDL+D Sbjct: 171 VSKKTGVLYGASAAIGGILAGASPVQADALYQYGVNSGIAFQIQDDLIDL 220 >gi|253578524|ref|ZP_04855796.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850842|gb|EES78800.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 295 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 127/243 (52%), Gaps = 14/243 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 MN +L + ++ + ++ L A T + A+ Y+ L GGK++R L+ Sbjct: 1 MN--FQDELAKRTEETEKVIRSFLPAEAGFAGT-----MAQAMNYSMLAGGKRLRPMLIR 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E LF+ A +E IH +SLIHDDLP++D+ RRG+ T H Y E +++ Sbjct: 54 ETYRLFDGKEEVVKPFMAGMEMIHTHSLIHDDLPALDDDDYRRGRLTTHKVYGEAMGVLS 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEF--IDETQ 176 G LL YA+E + K+ R L ++ G+ GMLGGQ +D++++ +++ Sbjct: 114 GVALLNYAYETMFQAFALTKEQDRVIHALRVVSQKTGIHGMLGGQSVDVENDGKPLEKEM 173 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233 + I + KT AL+ + +GAI+A A++ E + N+G+ FQ+ DD+LD E+ Sbjct: 174 LDYIYRNKTSALIEASMMTGAILAGANEQEVSAVEKAAGNIGLAFQIQDDILDVTSTAEE 233 Query: 234 LPK 236 L K Sbjct: 234 LGK 236 >gi|295693200|ref|YP_003601810.1| geranyltranstransferase [Lactobacillus crispatus ST1] gi|295031306|emb|CBL50785.1| Geranyltranstransferase [Lactobacillus crispatus ST1] Length = 289 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 74/222 (33%), Positives = 116/222 (52%), Gaps = 17/222 (7%) Query: 19 ILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRV 75 ++DD L A H+ ++ D ++ + Y+++ GGK++R L + +R+ Sbjct: 14 VIDDYL---AKHLASEVEDQKISQIMAYSVMAGGKRLRPLLFLATLNALGRKIEEPEIRI 70 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 71 ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGS 130 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMC 190 ++L+ +T +G GM+GGQ LDI D + ++ +KTG L+ Sbjct: 131 KS------AKLVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTGCLIQ 184 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E A+ A AS E+ +L F + G +Q+ DDL+D E Sbjct: 185 ASVEMAAVYAGASDIEQVKLVDFAKIFGRSYQIYDDLVDVVE 226 >gi|121998764|ref|YP_001003551.1| polyprenyl synthetase [Halorhodospira halophila SL1] gi|121590169|gb|ABM62749.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1] Length = 307 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 124/244 (50%), Gaps = 14/244 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61 L + L +R + L+ L +H + A+RYA+LGG K++R LV Sbjct: 11 EALEAALPPLRERAERALEAALPAADAH-----PTGIHEAMRYAVLGGGKRMRPILVYAT 65 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + A+E IH YSL+HDDLP+MD+ +RRG+PT H YDE TAI+ G+ Sbjct: 66 GQALDHTGRALDAPACAVEMIHAYSLVHDDLPAMDDDDLRRGQPTCHRAYDEPTAILVGD 125 Query: 122 GLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177 L AFE+++ + + R+ ++ +L G GM+GGQ +D +D ++ Sbjct: 126 ALQARAFELLADGEREGAPAPAARAGMVHALARAAGSGGMVGGQAIDLAAVGRQLDAAEL 185 Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED--- 233 + KTGAL+ + + GA+ + + L + + +G+ FQ+ DD+LD E D Sbjct: 186 EDMHIHKTGALIRASVQLGALASGPTCAATLNALDRYAKCVGLAFQIHDDVLDVEGDADA 245 Query: 234 LPKK 237 L K+ Sbjct: 246 LGKE 249 >gi|188581709|ref|YP_001925154.1| polyprenyl synthetase [Methylobacterium populi BJ001] gi|179345207|gb|ACB80619.1| Polyprenyl synthetase [Methylobacterium populi BJ001] Length = 320 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 101/238 (42%), Positives = 143/238 (60%), Gaps = 7/238 (2%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60 G +L + ++T L DLL T + RL+ A+R+A+LGG K++R FL E Sbjct: 17 TGDFTHRLAGVADTVETFLVDLLGPTLQTGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A + AL GA +E +HCYSL+HDDLP+MD+ +RRGKPTVH YDE TAI+ G Sbjct: 77 TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDE 174 + L T AFE+ + P+ Q IR++L+L L GL GM+GGQ+LD+ E +D Sbjct: 137 DALQTLAFEVTADPRWQPDPMIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPADMDI 196 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +Q MKTGA++ F+ E+GA++ A E+ L +G+ LG FQ+ADD+LD E Sbjct: 197 DDTLRMQAMKTGAILAFSVEAGALVGGAGAEERAALLRYGKALGQAFQVADDILDREA 254 >gi|117926629|ref|YP_867246.1| trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1] gi|117610385|gb|ABK45840.1| Trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1] Length = 331 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 16/235 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L S ++++ +R + ++ + L + TQ D LL++ GGK++R L A Sbjct: 10 ARLRSLVEQDLQRTNEVILEQLNSPV-ELITQVGDHLLNS------GGKRLRPILTLVTA 62 Query: 63 SLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 LF + A +E IH +L+HDD+ +D RRG+ T + + I+ G+ Sbjct: 63 KLFGYQKADVHALLAAVVEFIHTATLLHDDV--VDKSNTRRGQATANSVWGNKAPILVGD 120 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L + +F+I+ ++R ++S I +G + Q++ D DE + + Sbjct: 121 FLFSRSFQIMVEHG-----DLRVLRIVSDCCAIISEGEVM-QLVASNDLATDEERYLDVI 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KT +L A + GA++A S +R+ +G LG +Q+ DDLLD + K Sbjct: 175 RHKTASLFASASQLGAVVADQSDEIAQRMYDYGMMLGTAYQVVDDLLDYSAETEK 229 >gi|319899203|ref|YP_004159296.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73] gi|319403167|emb|CBI76726.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73] Length = 338 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A +F +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRIRPMITLAAAHMFGYQGDKHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+++ + + + +L+ I +G + Q+ + Sbjct: 115 MIWGNQASVLVGDFLLGQAFKMMVDVGS-----LEALSVLANAAAIIAEGEVM-QLSAAK 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + + + I KT AL A E G I+A E+ L +G +LG+ FQL DD+L Sbjct: 169 NIETNVSNYLKIINAKTAALFSAAAEVGPIIAGYGHEERSALHQYGLSLGVAFQLIDDVL 228 Query: 229 DCEE 232 D Sbjct: 229 DYSS 232 >gi|170288584|ref|YP_001738822.1| polyprenyl synthetase [Thermotoga sp. RQ2] gi|61657510|emb|CAI44421.1| geranyltranstransferase [Thermotoga sp. RQ2] gi|170176087|gb|ACB09139.1| Polyprenyl synthetase [Thermotoga sp. RQ2] Length = 272 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 97/226 (42%), Gaps = 16/226 (7%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70 ++++ + ++L + A+ Y A +GGK+IR LV V Sbjct: 2 KKEKVEERIREILRPGWDLLTE-------EAMLYSATVGGKRIRPLLVLTLGEDLGVEEE 54 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 L V A+E H SLIHDDLP +DN RRGKP+ H Y E A++AG+GL AF Sbjct: 55 KLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKPSCHRTYGEDIALLAGDGLFFLAFSQ 114 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 IS S+ L + + ++ I + V + KTGAL Sbjct: 115 ISKIGNSKIFEEFSETAYKLLLGEAMDVEFERRKME-----ISQEMVERMYAFKTGALFA 169 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 F + I+ + +++ GE G+ FQ+ DDL D K Sbjct: 170 FCFSAPFILKG---KDHTKMKLLGEKFGVAFQIYDDLKDILGSFEK 212 >gi|163737897|ref|ZP_02145313.1| branched-chain amino acid aminotransferase [Phaeobacter gallaeciensis BS107] gi|163743327|ref|ZP_02150707.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis 2.10] gi|161383321|gb|EDQ07710.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis 2.10] gi|161388513|gb|EDQ12866.1| branched-chain amino acid aminotransferase [Phaeobacter gallaeciensis BS107] Length = 299 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 93/229 (40%), Positives = 133/229 (58%), Gaps = 12/229 (5%) Query: 14 KRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71 + L D + +HM + +D L +A+RYA+ GGK +R FLV E A L V Sbjct: 15 RPFAQALKDAQTRITTHMDARLGGDDALHAAMRYAVTGGKMLRGFLVLESARLHGVAEAA 74 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 AL AIECIH YSL+HDDLP MD+ +RRG+PTVH ++DE A++AG+ L T+AFE++ Sbjct: 75 ALEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEAMAVLAGDSLQTFAFELL 134 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGA 187 + P+ + + G GM+ GQMLDI E +D Q+ +Q KTG Sbjct: 135 ADPRIGPHALTLIRGL---AQASGKDGMVSGQMLDIAAETATRPLDLEQITHLQNRKTGC 191 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ ++ +GA+MA A + LR + + LG+ FQ+ADD+LD E D K Sbjct: 192 LISWSATAGAVMAGADE---APLRRYADALGLAFQIADDILDVEGDAAK 237 >gi|152995175|ref|YP_001340010.1| polyprenyl synthetase [Marinomonas sp. MWYL1] gi|150836099|gb|ABR70075.1| Polyprenyl synthetase [Marinomonas sp. MWYL1] Length = 293 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 93/235 (39%), Positives = 134/235 (57%), Gaps = 10/235 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 L + S+ +DD L + L +A+ Y+L GGK++R L ASLF Sbjct: 3 LNDFSQYARRRVDDYLTLNLGQYEP--ATHLQNAMAYSLFNGGKRVRPMLTYAAASLFGE 60 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AAIE IH YSLIHDDLP+MD+ +RRGKPT HIQYDE TAI+AG+ L T+A Sbjct: 61 ANNLTDASAAAIESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQYDEATAILAGDALQTFA 120 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 FE++S+PK Q ++ QL+ L H G GM+ GQM+D+ + I+ ++ + + KT Sbjct: 121 FELLSNPKHQ-STKVQLQLIQELVHASGRHGMVTGQMIDLANVGNSINIDELEQMHQHKT 179 Query: 186 GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 GAL+ + GAI A S+ + L + +G+ FQ+ DD++D D L K Sbjct: 180 GALIRASIRMGAISTGAKSEADFAALDAYAAAIGLAFQVQDDIIDITSDTTTLGK 234 >gi|319651348|ref|ZP_08005477.1| HepT protein [Bacillus sp. 2_A_57_CT2] gi|317396879|gb|EFV77588.1| HepT protein [Bacillus sp. 2_A_57_CT2] Length = 320 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 16/223 (7%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76 T++++ L +T + L A + L GGK+IR V A + V Sbjct: 15 TVIENELEETIK----AESPLLHQASLHLLQAGGKRIRPVFVLLAAKFGEYDIDKIKNVA 70 Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 ++E IH SL+HDD+ +D+ +RRG+PT+ ++D A+ G+ + A E+I++ K Sbjct: 71 VSLELIHMASLVHDDV--IDDAELRRGQPTIKAKWDNKIAMYTGDYIFARALELITNIK- 127 Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196 N + +LS T G + Q+ D + + F K KT L+ +C+ G Sbjct: 128 ----NPHAHKILSHTLVELCIGEIE-QIKDKYNYDQNIRTYFRRIKRKTAMLIAVSCQLG 182 Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 I A+ ++ ++L FG +G+ +Q+ DD+LD +L K Sbjct: 183 GIAANVEEDIHKKLFKFGYFVGMSYQIIDDVLDFVGTEKELGK 225 >gi|121534498|ref|ZP_01666321.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1] gi|121306991|gb|EAX47910.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1] Length = 221 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 9/211 (4%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 L + Q+ + +D L L+ + A +++T + A+RY+L GGK++R L+ A Sbjct: 4 LKAYCQQKAALVDEALARLVPRQAGYLET-----VYEAMRYSLFAGGKRLRPILLMAAAD 58 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L V +E IH YSLIHDDLP+MDN RRGKPT H + E AI+AG+GL Sbjct: 59 AVGGRGSQYLHVACGLEMIHTYSLIHDDLPAMDNDDFRRGKPTSHRVFGEGMAILAGDGL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 LT AFE++ S + ++ + +++ + G GM+GGQ +D+ E +D + + Sbjct: 119 LTAAFEVMLS-QPGVEPGVLLKVVREIAQAAGPAGMVGGQAVDLAAEGKVLDADALKFMH 177 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRC 212 + KTGAL A +GA++A S ++ E L Sbjct: 178 QAKTGALFRAALRAGALLAGGSNSQIEALTA 208 >gi|85858101|ref|YP_460303.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / decaprenyl diphosphate synthase [Syntrophus aciditrophicus SB] gi|85721192|gb|ABC76135.1| farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / decaprenyl diphosphate synthase [Syntrophus aciditrophicus SB] Length = 324 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 13/233 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66 ++Q+ R L + + H++++ + + + L GGK+ R L+ A LF Sbjct: 2 QIQDVFSRYGAELKRVEEEMEFHLRSEVA-IIPEIVTHLLGSGGKRFRPLLLLISADLFG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + A +E IH SL HDD+ +D RRGK + + + ++ G+ L + Sbjct: 61 YQGRRCHTLSAVLEFIHTASLFHDDV--IDKAESRRGKVSANNIWGNAAVVLVGDFLYSK 118 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 A+++++ + + ++S T N+ +G + Q++ + + E I + KT Sbjct: 119 AYQLMAEDGS-----MEIMHLISTTSNVMSEGEVF-QLIKCGEVNLTEEDYLKIIEKKTA 172 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 L+ AC G + A ++ E L+ FG LG FQ+ DD LD EED K Sbjct: 173 ILISAACALGGYLGGAEVHQIEALKQFGLRLGSAFQMTDDTLDYVAREEDFGK 225 >gi|268680553|ref|YP_003304984.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268618584|gb|ACZ12949.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 286 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 73/223 (32%), Positives = 117/223 (52%), Gaps = 5/223 (2%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-L 70 +SK I + L + +++ H + +GGK+ R L+ Sbjct: 2 SSKAIVEKFEAFLKRELPVVESFHPHFNQAFGEMLDVGGKRFRPLLLLSVVEASAPLLFE 61 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 AL V +E +H YSLIHDDLP MDN +RRG PT+H+ YDE TA++ G+ L T+AF Sbjct: 62 NALHVSLGLEMMHTYSLIHDDLPCMDNAALRRGHPTLHVTYDETTAVLIGDALNTHAFYR 121 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGAL 188 I++ L I+ +L+ L + G+ GM+ GQ LD +D+ +D Q+ + KT L Sbjct: 122 IANA--PLSAEIKVRLVSILAGDAGIYGMVLGQALDCFFEDKRLDVEQLSFLHVHKTAKL 179 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 + + GA++ + +E + FG LG++FQ+ DD++D Sbjct: 180 IAASLLMGAVICELDKATQETVYAFGLRLGLLFQIQDDIIDAT 222 >gi|62260098|gb|AAX77879.1| unknown protein [synthetic construct] Length = 360 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 114/232 (49%), Gaps = 15/232 (6%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66 + K I ++ + + + + L++ I + ++ GGK++R LV A N Sbjct: 28 QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 87 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L + Sbjct: 88 YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 145 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ S DN++ +L+ N +G + Q+L+ ++ + E + + KT Sbjct: 146 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 199 Query: 187 ALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLP 235 L ACE +++ Q+ + R++ +G LG FQ+ADD+LD D Sbjct: 200 KLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAE 251 >gi|152978590|ref|YP_001344219.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z] gi|150840313|gb|ABR74284.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z] Length = 330 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N A IE IH SL+HDD+ +D +RRG+ T + Sbjct: 50 GGKRIRPMIALLAARALNYEGEKMPVCAAFIEFIHTASLLHDDV--VDESDMRRGRATAN 107 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++ + ++ ++S N+ +G + Q++++ Sbjct: 108 AAFGNAASVLVGDFIYTRAFQLMAKLNS-----LKMLTIMSDATNVLAEGEV-QQLMNVN 161 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L + ++ AIMA+A + + L+ +G LG FQL DD+L Sbjct: 162 DPETTEENYMKVIYRKTARLFEVSTQAAAIMANADEKIESALQQYGRYLGTAFQLVDDVL 221 Query: 229 DCEE 232 D Sbjct: 222 DYSA 225 >gi|93007052|ref|YP_581489.1| polyprenyl synthetase [Psychrobacter cryohalolentis K5] gi|92394730|gb|ABE76005.1| farnesyl-diphosphate synthase [Psychrobacter cryohalolentis K5] Length = 360 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 74/224 (33%), Positives = 112/224 (50%), Gaps = 25/224 (11%) Query: 33 TQHNDRLLSAIRYALLG-GKKIRSFLVTEC------------------ASLF--NVNHLT 71 + LL A RY + G GK +R LV ASL + ++ Sbjct: 67 AELPSPLLDACRYVMTGTGKLVRPLLVASAFSSTYSHNDTIADKDNALASLLENDSDYDM 126 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 R A+E +H YSL+HDDLP MD+ +RRG+PT HI ++E TA++AG+ L T AFE++ Sbjct: 127 CRRAALAVELLHTYSLVHDDLPCMDDDELRRGQPTAHIVFEESTALLAGDVLQTLAFEVL 186 Query: 132 -SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGA 187 + T + L + M+ GQMLD+ E I + + I + KTGA Sbjct: 187 TADLPTFAPFDSAIASQLFAIFAPRARRMVSGQMLDLNAEATTGISQNDLEAIHRDKTGA 246 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ A G I A A+ ++ L+ +++G+ FQ+ DD+LD Sbjct: 247 LIEAAMLMGGICAGATAPQRMALQECAQHIGLAFQVQDDILDVT 290 >gi|46908163|ref|YP_014552.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes serotype 4b str. F2365] gi|254931899|ref|ZP_05265258.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262] gi|46881433|gb|AAT04729.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes serotype 4b str. F2365] gi|293583451|gb|EFF95483.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262] gi|328472773|gb|EGF43622.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes 220] Length = 321 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 18/236 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + +Q++ ++ L L A+ + LL A GGK+IR V A L Sbjct: 6 LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 59 Query: 65 F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 N + AIE IH S++HDD+ +DN +RRG+ T+ ++ A+ G+ L Sbjct: 60 APNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETIKSKWGNHIAMYTGDFL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + E ++ K ++ + MLS G + Q+ D + K Sbjct: 118 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 171 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KT L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K Sbjct: 172 KTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227 >gi|15642935|ref|NP_227976.1| geranyltranstransferase [Thermotoga maritima MSB8] gi|4980655|gb|AAD35254.1|AE001701_7 geranyltranstransferase [Thermotoga maritima MSB8] Length = 272 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 97/226 (42%), Gaps = 16/226 (7%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70 ++++ + ++L + A+ Y A +GGK+IR LV V Sbjct: 2 KKEKVEERIREILRPGWDLLTE-------EAMLYSATVGGKRIRPLLVLTLGEDLGVEEE 54 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 L V A+E H SLIHDDLP +DN RRGKP+ H Y E A++AG+GL AF Sbjct: 55 KLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKPSCHRTYGEDIALLAGDGLFFLAFSQ 114 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 IS S+ L + + ++ + + V + KTGAL Sbjct: 115 ISKIGNSKIFEEFSETAYKLLLGEAMDVEFERRKME-----VSQEMVERMYAFKTGALFA 169 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 F + I+ + +++ GE G+ FQ+ DDL D K Sbjct: 170 FCFSAPFILKG---KDHTKMKLLGEKFGVAFQIYDDLKDILGSFEK 212 >gi|229845932|ref|ZP_04466044.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1] gi|229810936|gb|EEP46653.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1] Length = 323 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 95/184 (51%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ ++ ++ +++ N+ +G + Q++++ Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D ET + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 155 DPETSETNYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQNYGRYLGTAFQLVDDVL 214 Query: 229 DCEE 232 D Sbjct: 215 DYSA 218 >gi|308070091|ref|YP_003871696.1| geranyltranstransferase [Paenibacillus polymyxa E681] gi|305859370|gb|ADM71158.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Paenibacillus polymyxa E681] Length = 792 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 9/242 (3%) Query: 1 MNGGLPSKLQENSKRIDTI------LDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKI 53 M L + +E ++T+ +++ L T H ++L+ A Y+L G GK+I Sbjct: 488 MITQLKNDSREKEDFMNTVETVRDQINNQLKITKPHGIEAMKEQLIDAANYSLEGDGKRI 547 Query: 54 RSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112 R L + + ++ + + ++E +H SLI DDLPS DN RRG+ T+H ++ Sbjct: 548 RPILTWVMGVNEYGLDASAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRQTLHKVHN 607 Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172 TA + G L+ A SS +Q L+ M LD + + + Sbjct: 608 SATAELTGLYLIQKAIGEQSSL-SQFNAETVLALIQYSAQKAEDMCMGQAMDLDSKGKAL 666 Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 Q+ M+ KTG A++A A + E L+ F ++GI FQ+ DDLLD E Sbjct: 667 TLEQLNMMCFYKTGVAFEACLVMPAMLAQAEEPEIAALQKFAYHMGIAFQIKDDLLDVEG 726 Query: 233 DL 234 D+ Sbjct: 727 DM 728 >gi|119383153|ref|YP_914209.1| polyprenyl synthetase [Paracoccus denitrificans PD1222] gi|119372920|gb|ABL68513.1| farnesyl-diphosphate synthase [Paracoccus denitrificans PD1222] Length = 287 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 91/237 (38%), Positives = 133/237 (56%), Gaps = 18/237 (7%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 +L E ++ LD M L A+RYA +GGK+IR+FLV E A LF + Sbjct: 4 RLDEVKTQVQAALD-------GAMAGLPEGELTDAMRYACIGGKRIRAFLVMESARLFGL 56 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 +L V AA+E +H YSL+HDDLPSMD+ +RRG PTVH+++ E TAI+AG+ L + A Sbjct: 57 RDRESLPVAAAVEALHAYSLVHDDLPSMDDDDLRRGLPTVHVRWSEATAILAGDALQSLA 116 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKM 183 F +++ + IR L+ + +G +GM+ GQ LDI E +D + +Q+ Sbjct: 117 FGLLTDAQIG-APEIRLALVSGFSEAVGGRGMVWGQALDIAAETAVEPLDLMAIKRLQQA 175 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237 KTGAL+ F+ +GA+MA L + NLG+ FQ+ DD+LD D K+ Sbjct: 176 KTGALIQFSATAGAVMAGQDTG---PLAEYARNLGLAFQIHDDVLDVTGNEADTGKR 229 >gi|85712490|ref|ZP_01043538.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] gi|85693624|gb|EAQ31574.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145] Length = 323 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L L + IE IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLAVLSCRALGYEGRAHLSLATIIEFIHTATLLHDDV--VDESELRRGRKTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T AF+++ D++ +L+ N+ +G + Q+++ Sbjct: 101 AVFGNEASVLVGDFLYTRAFQMMVQL-----DSMTILSILADATNVIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + F + KT L A + ++ E+L +G LG FQL DDL+ Sbjct: 155 DPDTTEARYFDVIYGKTAKLFEAATQLAGVLTEQDSTVTEQLADYGRYLGTAFQLVDDLM 214 Query: 229 DCEED 233 D D Sbjct: 215 DYTSD 219 >gi|193212799|ref|YP_001998752.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] gi|193086276|gb|ACF11552.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327] Length = 324 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 21/237 (8%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59 + + +L+ +R T+L N + RY L GK+IR LV Sbjct: 6 VTSSVAEELKLFQERYKTVLHS------------SNTLVDKVTRYVLRQQGKQIRPTLVI 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A + R +E +H +LIHDD+ +D +RRG P+++ + +++ Sbjct: 54 LGAKVCGGVGDVTYRGAIMVELLHSATLIHDDV--VDGAEMRRGIPSINALWKNKISVLI 111 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179 G+ LL+ ++ S+ + ++ L Q+ + I E Sbjct: 112 GDYLLSKGLLYSLENSDYRSLHLVSEAVRRMSEGEIL------QIQKTRSLDITEEDYLS 165 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KTG+L+ +C GA A S+ E RL+ +GE LG+ FQ+ DDLLD D K Sbjct: 166 VIADKTGSLIATSCAIGAASATDSEEEIARLKHYGEFLGLAFQIRDDLLDYTGDSKK 222 >gi|332140074|ref|YP_004425812.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|332143128|ref|YP_004428866.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327550096|gb|AEA96814.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327553150|gb|AEA99868.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] Length = 324 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 96/187 (51%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A +++ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 43 GGKRLRPLLTVLSARAMGIDNNEHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++ S K +R +LS N +G + Q+++ Sbjct: 101 AIFGNQASVLVGDFLYTRSFQMMVSLK-----RMRVMEILSEATNQIAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + F + KT L A + A++ +++ + ++ +G++LG FQLADD+L Sbjct: 155 DAGTTEARYFDVIYGKTARLFEAATQLAAVLTEQNEHIERAMQEYGKHLGTAFQLADDIL 214 Query: 229 DCEEDLP 235 D D Sbjct: 215 DYMADSE 221 >gi|288931868|ref|YP_003435928.1| dimethylallyltranstransferase [Ferroglobus placidus DSM 10642] gi|288894116|gb|ADC65653.1| Dimethylallyltranstransferase [Ferroglobus placidus DSM 10642] Length = 318 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 18/233 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 ++E KR + + D++ + + ++L A R+ + GGK++R L Sbjct: 3 VEEIKKRAEIVNDEI----KKFLPVKEPEKLYKAARHLINAGGKRLRPVLSLIACEAIER 58 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 ++ L AIE +H ++LIHDD+ MD +RRG TVH Y TAI+AG+ L A Sbjct: 59 DYRKILPAAVAIEVVHNFTLIHDDI--MDEDELRRGVKTVHTIYGVPTAILAGDTLFAEA 116 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMK 184 F+I+S + + ++ + L + GQ +DI + EF+ E + + + K Sbjct: 117 FKIMSYCEVESENLVNGMRKL----AEVCVEICEGQQMDIEFEEREFVSEEEYLEMVRKK 172 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237 T L+ + AI+ + ++ L +G N GI FQ+ DD+LD L K+ Sbjct: 173 TSVLIALSSSIPAILFG-EKKYEKALWNYGINAGIAFQIKDDILDL---LGKE 221 >gi|78484685|ref|YP_390610.1| trans-hexaprenyltranstransferase [Thiomicrospira crunogena XCL-2] gi|78362971|gb|ABB40936.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2] Length = 321 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 12/191 (6%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A + L + A IE IH +L+HDD+ +D RRG T + Sbjct: 43 GGKRLRPLLVLLSAHACDYKGKDHLTLAAVIEFIHTSTLLHDDV--VDESETRRGNQTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + +FE++ P +R ++S T N+ +G + Q+L+ Sbjct: 101 EVWGNAASVLVGDFLYSRSFEMMVEPGI-----MRVMEVMSETTNVIAEGEVL-QLLNCH 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D + + KT L A G I+ + +G +LG FQL DD L Sbjct: 155 DADTTSQRYMEVIHRKTAKLFEAATLLGPIL-GKKPELESAFSSYGRHLGAAFQLIDDAL 213 Query: 229 DCEED---LPK 236 D D L K Sbjct: 214 DYTADADELGK 224 >gi|332312370|gb|EGJ25465.1| Trans-hexaprenyltranstransferase [Listeria monocytogenes str. Scott A] Length = 324 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 18/236 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + +Q++ ++ L L A+ + LL A GGK+IR V A L Sbjct: 9 LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 62 Query: 65 F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 N + AIE IH S++HDD+ +DN +RRG+ T+ ++ A+ G+ L Sbjct: 63 APNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETIKSKWGNHIAMYTGDFL 120 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + E ++ K ++ + MLS G + Q+ D + K Sbjct: 121 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 174 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KT L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K Sbjct: 175 KTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 230 >gi|289625167|ref|ZP_06458121.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651351|ref|ZP_06482694.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi str. 2250] gi|298485383|ref|ZP_07003473.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160081|gb|EFI01112.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330869163|gb|EGH03872.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330988777|gb|EGH86880.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 322 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS I +G + Q+ I Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMRILSKATRIIAEGEVL-QLSKI 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A + +A + + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|78485732|ref|YP_391657.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2] gi|78364018|gb|ABB41983.1| farnesyl-diphosphate synthase [Thiomicrospira crunogena XCL-2] Length = 291 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 87/231 (37%), Positives = 130/231 (56%), Gaps = 9/231 (3%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63 + + L R++ L LL Q QT + LL AI+YA L GK++R LV Sbjct: 1 MKTTLLRYQNRVNQKLKALLDQ-----QTSYPASLLEAIKYATLNNGKRLRPALVYAVGE 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 N++ A+E IH YSL+HDDLP+MD+ +RRG+PT HIQ+DE TAI+ G+ Sbjct: 56 SMNISLDKLDAAACAVELIHSYSLVHDDLPAMDDDDLRRGQPTCHIQFDEATAILVGDAQ 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181 T AFE +S L D+ + +L+ L+H G GM+GGQ++DIQ + +Q+ + Sbjct: 116 QTLAFEALSQ-DAFLADSDKVKLITLLSHASGGAGMIGGQIIDIQSNGHLPELSQLQKMH 174 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +MKTGAL+ + GA + ++ L G+ +G+ FQ+ DD+LD E Sbjct: 175 EMKTGALITASLLMGAAQSTHYPEKQPGLAKLGQKIGLAFQIHDDILDIEG 225 >gi|305662643|ref|YP_003858931.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230] gi|304377212|gb|ADM27051.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230] Length = 346 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 9/228 (3%) Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70 E + RI I+D+ ++ T + + + +A+ Y GGK++R +V A + + Sbjct: 20 EYASRISKIVDEFIMNTIRGIPSTLYE---AALHYLRAGGKRLRPLIVVLGARIVGGDED 76 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 A+ A++E +H ++L+HDD+ +D +RRG PTVH + AI+AG+ L Y++ Sbjct: 77 IAIPGAASVEVLHTFTLVHDDI--IDKDELRRGVPTVHKIWGSDMAIVAGDLLYAYSYRC 134 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGA 187 + + R + + + + + GQ LD+ + + + K KT A Sbjct: 135 LLRALERGVPVERVNKAIDILTDAAIT-VAEGQALDMLLPSMQNVSINDYIEMVKKKTAA 193 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 L + GA +A + L+ N GI FQ+ DD+L D Sbjct: 194 LFASSIAIGATLAGGDEKLTAILKESMINAGIAFQIRDDILGLIGDEK 241 >gi|257487512|ref|ZP_05641553.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 322 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS I +G + Q+ I Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMRILSKATRIIAEGEVL-QLSKI 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A + +A + + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|47094453|ref|ZP_00232133.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes str. 4b H7858] gi|226224534|ref|YP_002758641.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes Clip81459] gi|254825575|ref|ZP_05230576.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL J1-194] gi|254852833|ref|ZP_05242181.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL R2-503] gi|254993471|ref|ZP_05275661.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes FSL J2-064] gi|255521040|ref|ZP_05388277.1| heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes FSL J1-175] gi|300763760|ref|ZP_07073757.1| heptaprenyl diphosphate syntase component II [Listeria monocytogenes FSL N1-017] gi|47017168|gb|EAL08021.1| heptaprenyl diphosphate synthase, component II [Listeria monocytogenes str. 4b H7858] gi|225876996|emb|CAS05705.1| Putative heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606162|gb|EEW18770.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL R2-503] gi|293594818|gb|EFG02579.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL J1-194] gi|300515496|gb|EFK42546.1| heptaprenyl diphosphate syntase component II [Listeria monocytogenes FSL N1-017] Length = 321 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 18/236 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + +Q++ ++ L L A+ + LL A GGK+IR V A L Sbjct: 6 LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 59 Query: 65 F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 N + AIE IH S++HDD+ +DN +RRG+ T+ ++ A+ G+ L Sbjct: 60 APNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETIKSKWGNHIAMYTGDFL 117 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + E ++ K ++ + MLS G + Q+ D + K Sbjct: 118 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 171 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 KT L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K Sbjct: 172 KTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227 >gi|88799582|ref|ZP_01115158.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Reinekea sp. MED297] gi|88777667|gb|EAR08866.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase) [Reinekea sp. MED297] Length = 293 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 85/236 (36%), Positives = 128/236 (54%), Gaps = 12/236 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 L + L E +++ L Q S D L SAI Y+LL GGK++R LV + Sbjct: 3 LETFLTETKSSLESALTQSFQQGVS-------DELTSAIHYSLLNGGKRLRPSLVRAASD 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 L L A+E IH YSL+HDDLP+MD+ +RRGKPT H Q+ E TAI+AG+ L Sbjct: 56 LVRAPDGLWLIPAQALEMIHVYSLVHDDLPAMDDDDLRRGKPTCHRQFSEATAILAGDAL 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 + AF +I+ + IR ++ L + G +GM+GGQM+D+ E + ++ + Sbjct: 116 QSEAFALIAGAEALSPRQIR-DMVRLLAQSAGARGMVGGQMIDLASEQKTLTLNELSDLH 174 Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 ++KTGAL+ + + GA+ RL +G+ +G+ FQ+ADD+LD K Sbjct: 175 RLKTGALISASLQLGALCHDSVDVEILARLARYGDAIGLAFQIADDILDVTGTTEK 230 >gi|322418219|ref|YP_004197442.1| poluprenyl synthetase [Geobacter sp. M18] gi|320124606|gb|ADW12166.1| Polyprenyl synthetase [Geobacter sp. M18] Length = 322 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 10/225 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 + I L ++ LQ +Q+ + Y L GGK+IR LV A L Sbjct: 1 MDAALALIGEDLKNVELQFKKDLQSDVP-LIRKVGEYVLSSGGKRIRPALVLLAARLCGY 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + ++ + + +E IH +L+HDD+ +DN +RRG + + + +++ G+ L + + Sbjct: 60 DGSRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASANTLWGNEASVLVGDFLFSKS 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F ++ + ++ +L+ + +G + Q++ D I + + + KT Sbjct: 118 FSLMVTDG-----DLGILKVLADATTMIAEGEVL-QLVCTSDLDITVERYIEVVRSKTAI 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ ACE GAI+ A ++ + +G +LGI FQL DD LD Sbjct: 172 LLSAACEVGAILGGAEPGLRQAVADYGMDLGIAFQLMDDTLDYTA 216 >gi|288941872|ref|YP_003444112.1| trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180] gi|288897244|gb|ADC63080.1| Trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180] Length = 322 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 19/227 (8%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66 + E++K +D ++ L Q + L++ I + ++ GGK++R V A Sbjct: 10 VAEDTKAVDALILRRL---------QSDVVLINQIGHYIVNSGGKRLRPLSVLLAARACG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + A +E IH +L+HDD+ +D +RR + T ++ + +++ G+ L + Sbjct: 61 YTGERHIDLAAIVEFIHTSTLLHDDV--VDGSELRRNRETANVVWGNDASVLVGDFLYSR 118 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 +FE++ N+R +L+ N +G + Q+L+ +D DE + + KT Sbjct: 119 SFEMMVDVG-----NMRVMEVLAHATNRIAEGEVL-QLLNERDPDTDEARYMEVISRKTA 172 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L GA++A + +E +R +G LGI FQL DD LD D Sbjct: 173 TLFEAGTRLGAVIAESPPEIEEAIREYGLRLGIAFQLVDDALDYSVD 219 >gi|49083716|gb|AAT51120.1| PA4569 [synthetic construct] Length = 323 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 15/227 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + E+ +D I+ L ++ D ++SA GGK++R LV Sbjct: 10 VAEDFTAVDGIIRRQLTSRVPLVEKIG-DYIISA------GGKRLRPLLVLLAGKTLGYK 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + A IE +H +L+HDD+ +D +RRG+ T + + +++ G+ L +F Sbjct: 63 GDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSF 120 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E++ + + ++S + +G + Q+ ++D E + + KT L Sbjct: 121 EMMVELGS-----MPVMRIISQATRVIAEGEVL-QLSKVRDASTTEETYMEVIRGKTAML 174 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + S A + A + + E LR FG+ LGI FQL DDLLD D Sbjct: 175 FEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAA 221 >gi|327440778|dbj|BAK17143.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris StLB046] Length = 324 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 21/231 (9%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L + ++ + + I+ L+ L ++SH+ + LL A GGK+IR A Sbjct: 9 LYADIKSDIEVIENELEQAL-NSSSHLLNDASVHLLQA------GGKRIRPVFTLLSAKF 61 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + N + +E IH SL+HDD+ +DN +RRG+ TV Q++ A+ GN + Sbjct: 62 GDYNIDRMKNIAVPLELIHMGSLVHDDV--IDNSDMRRGRETVKAQWNNRVAMYTGNFIF 119 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQ 181 A + ++S + I ++ M+ ++ G+++ I+D+F F Sbjct: 120 ARALQYVTSIENPRAHQILAKTMVE---------LVNGEVIQIEDKFRLDQSLKDYFRRI 170 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 K KT L+ +CE GA+++ A + L+ +G +G+ FQ+ DD+LD Sbjct: 171 KRKTALLIESSCELGAVVSGADEKTARHLKRYGYFVGMSFQIVDDILDFTA 221 >gi|238898823|ref|YP_002924505.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466582|gb|ACQ68356.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 310 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 8/182 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T + Sbjct: 30 GGKRIRPMISILSARALNYKGDQHIIVAALIEFIHTATLLHDDV--VDKSDLRRGKKTAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T AF++++ + +R ++S N+ +G + Q++ Sbjct: 88 TVFGNSASVLVGDFIYTRAFQMMTDLGS-----MRILKVMSSATNVISEGEV-QQLMYCN 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + I E + KT L A +S AI+A AS ++ L+ +G LG +QL DDLL Sbjct: 142 NVNITEYDYMKVIYSKTARLFEAASQSAAILAKASPEQESALQSYGCYLGTTYQLIDDLL 201 Query: 229 DC 230 D Sbjct: 202 DY 203 >gi|253998223|ref|YP_003050286.1| trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4] gi|253984902|gb|ACT49759.1| Trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4] Length = 322 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 17/230 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63 + S + ++ + +D ++ L H +++ Y + GG K++R LV A Sbjct: 6 IKSCIAQDMQAVDAVIRKSL-----HSDVVLINQVAE---YIINGGGKRLRPALVLLSAG 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F + + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ + Sbjct: 58 AFGEVNARHHELAAVVEFIHTATLLHDDV--VDESAMRRGRATANTLFGNAASVLVGDFI 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + AF+++ +++R +L+ NI +G + Q+L++ D I + + Sbjct: 116 YSRAFQMMVG-----VESMRVMEVLAEATNIIAEGEVL-QLLNVHDADITDEAYLKVIHY 169 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 KT L A GAI+ AS+ +++ + +G LG FQL DD+LD D Sbjct: 170 KTAKLFEAATRLGAIICAASEQDEQAMAEYGMRLGTAFQLIDDVLDFSGD 219 >gi|260461502|ref|ZP_05809749.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] gi|259032572|gb|EEW33836.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] Length = 305 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 111/233 (47%), Positives = 151/233 (64%), Gaps = 3/233 (1%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62 L + ++ +L LL + RL++A+R+ L GGK++R FLV E A Sbjct: 8 AFEMALIRRAAAVEVLLRRLLDDRPLTGEIARPGRLMAAMRHGVLNGGKRLRPFLVMESA 67 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 +LF+ + ALRV AA+EC+HCYSLIHDDLP+MD+ +RRG+PTVH +DE TAI+AG+ Sbjct: 68 ALFSADGEAALRVAAALECVHCYSLIHDDLPAMDDDDMRRGQPTVHRAFDEATAILAGDA 127 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180 LLT AF+II+ T L R+ L+L+L G GM+GGQ LD++ E DE + + Sbjct: 128 LLTLAFDIIAGEATVLPAERRAALVLALARAAGAGGMVGGQTLDLEAERTPPDEAGIIRL 187 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 Q MKTGAL+ FACE+GAI+A A ++ERL FG +G+ FQLADDLLD D Sbjct: 188 QAMKTGALIRFACEAGAIIAGAPAEDRERLAEFGSAVGLAFQLADDLLDLTAD 240 >gi|262371871|ref|ZP_06065150.1| geranyltranstransferase [Acinetobacter junii SH205] gi|262311896|gb|EEY92981.1| geranyltranstransferase [Acinetobacter junii SH205] Length = 303 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66 L++ +RI DLL A+ + L +A+ +A+ LGGK++R L ASL N Sbjct: 12 LKQAQQRIQQ---DLLTALAAF---SLPEPLKAAVHHAVMLGGKRVRPALCYAAASLQAN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L + Sbjct: 66 QNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125 Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181 AFEI+ S + ++L M+ GQ+LD+Q E + + ++ I Sbjct: 126 AFEILGSRLFDDQAQGTDAAIVLKQMQILATASSKMVCGQVLDLQAEGKHVAQDELENIH 185 Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA+ + + +LR FG+++G+ FQ+ DD+LD Sbjct: 186 RNKTGALIQAAIMMGAVTIYSGTDQAIPKLRQFGQSIGLAFQVQDDILDITA 237 >gi|15599765|ref|NP_253259.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1] gi|107099768|ref|ZP_01363686.1| hypothetical protein PaerPA_01000786 [Pseudomonas aeruginosa PACS2] gi|116052711|ref|YP_793028.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|218893664|ref|YP_002442533.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58] gi|254238683|ref|ZP_04932006.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719] gi|254244534|ref|ZP_04937856.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192] gi|296391383|ref|ZP_06880858.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAb1] gi|313107214|ref|ZP_07793413.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016] gi|9950815|gb|AAG07957.1|AE004870_8 octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1] gi|115587932|gb|ABJ13947.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|126170614|gb|EAZ56125.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719] gi|126197912|gb|EAZ61975.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192] gi|218773892|emb|CAW29706.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58] gi|310879915|gb|EFQ38509.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016] Length = 322 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 15/227 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + E+ +D I+ L ++ D ++SA GGK++R LV Sbjct: 10 VAEDFTAVDGIIRRQLTSRVPLVEKIG-DYIISA------GGKRLRPLLVLLAGKTLGYK 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + A IE +H +L+HDD+ +D +RRG+ T + + +++ G+ L +F Sbjct: 63 GDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSF 120 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E++ + + ++S + +G + Q+ ++D E + + KT L Sbjct: 121 EMMVELGS-----MPVMRIISQATRVIAEGEVL-QLSKVRDASTTEETYMEVIRGKTAML 174 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + S A + A + + E LR FG+ LGI FQL DDLLD D Sbjct: 175 FEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAA 221 >gi|153007864|ref|YP_001369079.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] gi|151559752|gb|ABS13250.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188] Length = 356 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ A+E +H +L+HDD+ +D +RRGK T Sbjct: 75 GGKRLRPMMTLAAARMFGYEGDGHVRLATAVEFMHTATLLHDDV--VDESDLRRGKSTAR 132 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF+++ + + + +L+ + ++ +G + Q+ + Sbjct: 133 MIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASVIAEGEVM-QLAAAK 186 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 187 NMETTEDEYLAVIKAKTAALFSAAGEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 246 Query: 229 DC---EEDLPK 236 D DL K Sbjct: 247 DYGGSAADLGK 257 >gi|312864464|ref|ZP_07724695.1| geranyltranstransferase [Streptococcus downei F0415] gi|311099591|gb|EFQ57804.1| geranyltranstransferase [Streptococcus downei F0415] Length = 288 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 86/232 (37%), Positives = 126/232 (54%), Gaps = 15/232 (6%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 ++ID L + + Q+Q + RL+ AI Y++ GGK+IR L+ E F + Sbjct: 3 KLEKIDAALKEF------YEQSQVSPRLMEAILYSVHAGGKRIRPLLLLETLEGFGIELT 56 Query: 71 TA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 A +V AA+E IH SLIHDDLP+MD+ RRG+ T H Q+DE TAI+AG+ L + Sbjct: 57 KAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKQFDEATAILAGDSLFLDPYG 116 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGA 187 +I+ T L +I L+ L+ G GM+ GQMLDI+ E + QV+ I KTG Sbjct: 117 LIAQ--TDLHPSIALALIADLSQASGSFGMVAGQMLDIEGEEQTLTLDQVYTIHSHKTGK 174 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 L+ F ++ ++A +L G +G FQ+ DD+LD E+L K Sbjct: 175 LLAFPFKAAGLLAQQDSAILAQLEEVGLLVGTAFQVRDDILDVTASFEELGK 226 >gi|115526409|ref|YP_783320.1| farnesyltranstransferase [Rhodopseudomonas palustris BisA53] gi|115520356|gb|ABJ08340.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisA53] Length = 341 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 112/236 (47%), Gaps = 19/236 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 L + + KR++ + L +T S M + + L+S+ GGK++R L Sbjct: 21 DQLVELVAADMKRVNATI---LSRTGSEVTMIPEVANHLISS------GGKRLRPMLTLA 71 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A+L +++ AA+E +H +L+HDD+ +D +RRGK + + + +++ G Sbjct: 72 MANLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSARMLWGNEASVLVG 129 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + LL AF ++ + +R+ +LS +G + Q+ ++ E + + Sbjct: 130 DFLLGQAFRMMVEVGS-----LRALDILSAASATIAEGEVM-QLAAAKNTATTEDEYLAV 183 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KT L ACE G +A + E+ R FG N+GI FQL DD+LD K Sbjct: 184 IRGKTAELFAAACEVGPAIAERPKPEQSACRSFGMNIGIAFQLVDDVLDYGGKAAK 239 >gi|167856324|ref|ZP_02479054.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755] gi|167852554|gb|EDS23838.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755] Length = 327 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLIAVLAANTVGYKGQEHITCAAFVEFIHTATLLHDDV--VDESDMRRGRETAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++S ++ + ++S N+ +G + Q++++ Sbjct: 105 ARFGNAASVLVGDFIYTRAFQMMASLRS-----LDVLQVMSDATNVIAEGEV-QQLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI++ A Q +R +G LG FQL DD+L Sbjct: 159 DPETTEANYMQVIYSKTARLFEAASQCSAIVSGADQATVIAMRDYGRYLGTAFQLVDDIL 218 Query: 229 DCEE 232 D Sbjct: 219 DYSA 222 >gi|322385057|ref|ZP_08058707.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100] gi|321270967|gb|EFX53877.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100] Length = 291 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 6/213 (2%) Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIEC 81 L + + + L I Y++ GGK+IR L+ E F + A +V AA+E Sbjct: 12 LTIQEFYQSKEVSADLTETILYSVEAGGKRIRPLLLLELLEGFGLELTPAHFQVAAALEM 71 Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141 IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L + +++ +L Sbjct: 72 IHTGSLIHDDLPAMDNDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLVAM--VELPSQ 129 Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIM 199 ++ L+ L+ G GM+ GQ+LD+Q E + Q+ I KTG L+ + + I+ Sbjct: 130 VKVDLIAELSLAAGSFGMVAGQVLDMQGEGRKLTMDQLQTIHANKTGKLLAYPFVAAGII 189 Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A SQ+ +LR GE LG+ FQ+ DD+LD Sbjct: 190 AQTSQSVLGKLRQAGELLGLAFQVRDDILDVTA 222 >gi|163734437|ref|ZP_02141877.1| geranyltranstransferase [Roseobacter litoralis Och 149] gi|161392445|gb|EDQ16774.1| geranyltranstransferase [Roseobacter litoralis Och 149] Length = 289 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 84/236 (35%), Positives = 133/236 (56%), Gaps = 14/236 (5%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 +L+ + D +L + ++ A+ +A GGK++R FLV E A L Sbjct: 2 FSQRLEAAGAAVQAHFDKVLAEFE-------PLPIVEAMAHATSGGKRLRGFLVLETARL 54 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 ++ A+ AIE +H YSL+HDDLP MD+ +RRG+PTVH ++D+ TA++AG+ L Sbjct: 55 HDIAAGEAIWSATAIEALHAYSLVHDDLPCMDDDDMRRGQPTVHKKWDDATAVLAGDALQ 114 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180 T AFE+++ P +R+ L LSL G QGM+ GQ LDI E + ++ + Sbjct: 115 TLAFELVTHPGASPSAEVRADLALSLARASGAQGMVLGQALDIAAETAHTPLSLDEITRL 174 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 Q+ KTGAL+ ++ ++GA +A A L+ + + LG+ FQ+ADD+LD D + Sbjct: 175 QQGKTGALIGWSAQAGARLAQAD---TAALKRYAQALGLAFQIADDILDVTGDSAQ 227 >gi|296284709|ref|ZP_06862707.1| geranylgeranyl pyrophosphate synthase [Citromicrobium bathyomarinum JL354] Length = 340 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 8/187 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A L N ++ AA+E IH +L+HDD+ +D +RRGK + Sbjct: 59 GGKRLRPMLTLAGAELVGYNGTRHHKLAAAVEFIHTATLLHDDV--VDGSEMRRGKAAAN 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 I + ++ G+ L + AFE+++ + ++ +LS I +G + Q+ + Sbjct: 117 IIFGNPATVLVGDFLFSRAFELMTEDGS-----LKVLKILSSASAIIAEGEVA-QLTSQR 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 E + I KT AL A A++A S E++ L +G NLGI FQL DD L Sbjct: 171 KITTSEQRYLDIIGSKTAALFAAASRIAAVVAECSDAEEQALDDYGRNLGIAFQLVDDAL 230 Query: 229 DCEEDLP 235 D D Sbjct: 231 DYSSDAA 237 >gi|167627921|ref|YP_001678421.1| polyprenyl synthetase family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597922|gb|ABZ87920.1| polyprenyl synthetase family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 325 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 14/194 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + N L A IE IH +L+HDD+ +D+ ++RRGK T + Sbjct: 44 GGKRLRPLLVMLFSRALNYTGNDHLACAAIIEFIHTATLLHDDV--VDDSHLRRGKETAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ DN++ +L+ N +G + Q+L+ + Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVGL-----DNMQIMQILADATNKISEGEVL-QLLNAR 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ---NEKERLRCFGENLGIIFQLAD 225 + + E + KT L ACE +++ Q + ++ +G LG FQ+AD Sbjct: 156 NIELSEEDYTNVIYCKTAKLFEAACELAGVISLDKQSYSKLQNSIKNYGVYLGNAFQIAD 215 Query: 226 DLLDCEED---LPK 236 D+LD D L K Sbjct: 216 DVLDYVSDAESLGK 229 >gi|320326220|gb|EFW82274.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea str. B076] gi|320330645|gb|EFW86622.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330881372|gb|EGH15521.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330891602|gb|EGH24263.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. mori str. 301020] Length = 322 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS I +G + Q+ I Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMRILSKATRIIAEGEVL-QLSKI 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A + +A + + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|241668473|ref|ZP_04756051.1| polyprenyl synthetase family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877007|ref|ZP_05249717.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843028|gb|EET21442.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 325 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 14/194 (7%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV + N L A IE IH +L+HDD+ +D+ ++RRGK T + Sbjct: 44 GGKRLRPLLVMLFSRALNYTGNDHLACAAIIEFIHTATLLHDDV--VDDSHLRRGKETAN 101 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L + AF+++ DN++ +L+ N +G + Q+L+ + Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVGL-----DNMKIMQILADATNKISEGEVL-QLLNAR 155 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ---NEKERLRCFGENLGIIFQLAD 225 + + E + KT L ACE +++ Q + ++ +G LG FQ+AD Sbjct: 156 NIELSEEDYTNVIYCKTAKLFEAACELAGVISLDKQSYSKLQNSIKNYGVYLGNAFQIAD 215 Query: 226 DLLDCEED---LPK 236 D+LD D L K Sbjct: 216 DVLDYVSDAESLGK 229 >gi|205373837|ref|ZP_03226639.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus coahuilensis m4-4] Length = 320 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 18/222 (8%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 +++ + + + L A + L GGK+IR V N V ++E Sbjct: 15 NIIEEELQQAISSSSQTLNEASLHLLQAGGKRIRPVFVLLGGKFGEYNIDVVKNVAVSLE 74 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 IH SL+ DD+ +D+ IRRG PTV Q+D A+ G+ + + + + + Sbjct: 75 LIHMASLVLDDV--IDDAEIRRGIPTVKSQWDNKVAMYTGDYIFARSLDYMLNIPNPEAH 132 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGA 197 I S ++ + G++ I+D+++ K KT L+ +C+ GA Sbjct: 133 KILSDAIVE---------VCKGEIAQIKDKYLFEQSLRDYLRRIKRKTALLIAVSCQLGA 183 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 I++ A + ERL FG +G+ FQ+ DD+LD +L K Sbjct: 184 IVSGAPREVHERLYRFGYYVGMSFQIIDDILDFTATADELGK 225 >gi|222054630|ref|YP_002536992.1| Polyprenyl synthetase [Geobacter sp. FRC-32] gi|221563919|gb|ACM19891.1| Polyprenyl synthetase [Geobacter sp. FRC-32] Length = 322 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 13/232 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67 ++ I L ++ LQ + + + Y L GGK+IR L+ A L Sbjct: 1 MEAALALIGEDLTNVELQFKKDLHSDVP-LIRKVGEYVLASGGKRIRPALLLLSAKLCGY 59 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + + + IE IH +L+HDD+ +DN +RRG + + + +++ G+ L + + Sbjct: 60 TGNRNVALASVIEFIHTATLLHDDV--VDNANLRRGIASANTLWGNEASVLVGDFLFSKS 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 F ++ + +++ +LS I +G + Q++ D + + + K KT Sbjct: 118 FSLMVADG-----DLKILKVLSGATTIIAEGEVL-QLICTSDLDLTLERYIEVVKAKTAI 171 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 L+ AC+SGAI+ AS + L+ FG +LGI FQL DD LD EE K Sbjct: 172 LLSAACQSGAILGQASSQHETALQEFGMDLGIAFQLMDDTLDYVASEEQFGK 223 >gi|325123276|gb|ADY82799.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2] Length = 303 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66 L++ +RI DLL A+ + L SA+ +A+ LGGK++R L ASL N Sbjct: 12 LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQPN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L + Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125 Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 AFE++ S + + ++L M+ GQ+LD+Q E I + ++ I Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQMQILATASSKMVSGQVLDLQAEGKQITQDELENIH 185 Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA+ + + +LR +G+ +G+ FQ+ DD+LD Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITS 237 >gi|226312054|ref|YP_002771948.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis NBRC 100599] gi|226095002|dbj|BAH43444.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis NBRC 100599] Length = 321 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 15/225 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67 K++++ + I+ L+ + T + LS+ GGK+IR V N Sbjct: 9 KMKKDVQYIEDELE-------KAIDTPVRELYLSSTHLLKAGGKRIRPVFVLLGGKWGNY 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + V +E IH SL+HDD+ +D+ RRGK TV +++D A+ AG+ + A Sbjct: 62 DVKKLKHVAVPLELIHMASLVHDDV--IDDADKRRGKDTVRMKWDNKVAMYAGDYIFARA 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 I S I S ++ + Q+ D+ + + K KT Sbjct: 120 LAIASQLPIPQLHQILSNAIVEVCKGEI------QQVKDLNNWDQNFRTYLRRIKRKTAL 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ +C+ GA+ + AS + ++ +G N+G+ FQ+ DD+LD Sbjct: 174 LIAISCQLGAVASGASADMIRKMYWYGYNVGMAFQITDDILDFTG 218 >gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 358 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 78/249 (31%), Positives = 128/249 (51%), Gaps = 21/249 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 + + E + ++ LD A+ + L A+RYALL GGK++R L Sbjct: 56 FDFKAYMGERAVAVNGALD------AAVPAGEPPATLHEAMRYALLAGGKRVRPALCLAA 109 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + A+ AA+E +H SL+HDDLP MD+ +RRGKPT H+ + E A++AG+ Sbjct: 110 CVVSGGREAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVMFGEPIAVLAGD 169 Query: 122 GLLTYAFEIISSPKTQLKD-------NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174 LL AF+ ++S + D + + L IG +G++ GQ++D++ E Sbjct: 170 ALLALAFQHMASVDSYPPDVDPAKHTARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTE 229 Query: 175 ----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 ++ I KT AL+ + GAI+ S+ + ERLR + ++G++FQ+ DD+LD Sbjct: 230 PVPLDRLEYIHLHKTAALLEASVVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDV 289 Query: 231 E---EDLPK 236 E+L K Sbjct: 290 TKSSEELGK 298 >gi|262371901|ref|ZP_06065180.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii SH205] gi|262311926|gb|EEY93011.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii SH205] Length = 325 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 10/189 (5%) Query: 48 LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK++R + A VN A + A IE +H +L+HDD+ +D +RRG+PT Sbjct: 45 AGGKRMRPIMCLLAAKACGLVNMQQAQHLAAIIEMLHTATLVHDDV--VDESNLRRGRPT 102 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 + ++ TA++ G+ L+ +F+++ +NI S +G + Sbjct: 103 ANATWNNQTAVLVGDFLIARSFDLLVDL-----NNITLLKDFSTGTCEIAEGEVLQLQSQ 157 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 Q E E I KT L A E AI+A ++ +E LR F + G FQ+ DD Sbjct: 158 HQPE-TTEETYLRIIHGKTSRLFELATEGAAILAG-TEEYREPLRRFAGHFGNAFQIIDD 215 Query: 227 LLDCEEDLP 235 +LD D Sbjct: 216 ILDYTSDAE 224 >gi|325661672|ref|ZP_08150295.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471925|gb|EGC75140.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium 4_1_37FAA] Length = 296 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 12/237 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN + ++ ++ I+ IL L Q ++ A+ Y+L+ GGK++R L+ Sbjct: 1 MN--FRDEKRKKTEEIEQILKAYLPVQEGKQQV-----IMEAMEYSLMAGGKRLRPMLLW 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E +F T AAIE IH YSL+HDDLP+MD+ RRG+ T HI Y E I+A Sbjct: 54 ETFQMFGGAAKTVRPFMAAIEMIHTYSLVHDDLPAMDDDDYRRGRKTTHIVYGEDMGILA 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175 G+ LL YAFE + + + + + L G+ GM+GGQ++D+ + I E Sbjct: 114 GDALLNYAFETACTAFEEAPEEAIRIGKALQVLAKKAGIYGMIGGQVVDVSASGKNITED 173 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I ++KTGAL+ A GAI+A A + E + + +GI FQ+ DD+LD Sbjct: 174 ILSFIYELKTGALLESAMMIGAILAGAEEEEVAVIEQVAKKIGIAFQIQDDILDVTS 230 >gi|293610957|ref|ZP_06693256.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826609|gb|EFF84975.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 303 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66 L++ +RI DLL A+ + L SA+ +A+ LGGK++R L ASL N Sbjct: 12 LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQPN 65 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L + Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125 Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181 AFE++ S + + ++L M+ GQ+LD+Q E I + ++ I Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQMQILATASSKMVSGQVLDLQAEGKKITQDELENIH 185 Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + KTGAL+ A GA+ + + +LR +G+ +G+ FQ+ DD+LD Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITS 237 >gi|313200295|ref|YP_004038953.1| trans-hexaprenyltranstransferase [Methylovorus sp. MP688] gi|312439611|gb|ADQ83717.1| Trans-hexaprenyltranstransferase [Methylovorus sp. MP688] Length = 309 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 8/185 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R LV A F + + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 30 GGKRLRPALVLLSAGAFGEVNARHHELAAVVEFIHTATLLHDDV--VDESAMRRGRATAN 87 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + + AF+++ +++R +L+ NI +G + Q+L++ Sbjct: 88 TLFGNAASVLVGDFIYSRAFQMMVG-----VESMRVMEVLAEATNIIAEGEVL-QLLNVH 141 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I + + KT L A GAI+ AS+ +++ + +G LG FQL DD+L Sbjct: 142 DADITDEAYLKVIHYKTAKLFEAATRLGAIICSASEQDEQAMAEYGMRLGTAFQLIDDVL 201 Query: 229 DCEED 233 D D Sbjct: 202 DFSGD 206 >gi|319897631|ref|YP_004135828.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031] gi|317433137|emb|CBY81511.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031] Length = 329 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ ++ ++ +++ N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQNYGRYLGTAFQLVDDVL 220 Query: 229 DCEE 232 D Sbjct: 221 DYSA 224 >gi|315931387|gb|EFV10356.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 327] Length = 281 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%) Query: 48 LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 95 LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNTGLNGMVIGQAID 152 Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ Sbjct: 153 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212 Query: 225 DDLLDCE 231 DD++D Sbjct: 213 DDIIDVT 219 >gi|160947156|ref|ZP_02094323.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270] gi|158446290|gb|EDP23285.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270] Length = 282 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 120/224 (53%), Gaps = 7/224 (3%) Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79 D +++T + N+ Y+ +GGK+IR+ L+ E + A+ A+ Sbjct: 11 DKSIIETRLNKVYADNNEFEKMCAYSFSVGGKRIRAILLLEAFKICRDISDIAIDFSVAL 70 Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139 E IH YSL+HDDLP MD+ RRG +V+ +Y + A++ G+ LL A I+ QL+ Sbjct: 71 ELIHNYSLVHDDLPEMDDDKFRRGVLSVYGKYGQSNAVLVGDELLNNANLIMFKAIKQLE 130 Query: 140 DNIRSQLMLSLTH----NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195 + + +S + + G+ GM+ GQ LD+++ + + + I +KTG L A + Sbjct: 131 NIDEIKNAISASEIILNSSGINGMVYGQFLDLENNVENLSDIEKINSLKTGELFKAAILA 190 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237 GA + AS N+ L + +NLG++FQL DDL D +ED+ KK Sbjct: 191 GAKLGGASDNDLAHLEIYAKNLGLVFQLQDDLFDYDEDVELNKK 234 >gi|148993815|ref|ZP_01823217.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae SP9-BS68] gi|168489033|ref|ZP_02713232.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae SP195] gi|147927640|gb|EDK78665.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae SP9-BS68] gi|183572405|gb|EDT92933.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae SP195] gi|332073546|gb|EGI84025.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA17570] Length = 291 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 15/234 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 QE ++++L+D + Q L ++ Y++ GGK+IR FL+ E V Sbjct: 4 QEKLALVESVLEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57 Query: 69 HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +I+ L I+ L+ SL+ G GM+ GQ+LD++ E + ++ I KT Sbjct: 118 YALIAQA--DLPSQIKVDLIASLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 G L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD E++ K Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229 >gi|299066176|emb|CBJ37360.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia solanacearum CMR15] Length = 299 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 76/236 (32%), Positives = 119/236 (50%), Gaps = 9/236 (3%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61 + R ++ L+ L + RL +A+RYA LG GK++R L Sbjct: 2 SDFAHWMASVVARTESALERALP-----GELVAPQRLHAAMRYATLGAGKRVRPLLAHAA 56 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 +L + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+ Sbjct: 57 GALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L T AF ++ + R+ L+ L G GM GGQ +D+Q + + + Sbjct: 117 ALQTQAFIALAELGA-VSPATRAGLVGELARASGSLGMAGGQAIDLQSVGVALSQDALET 175 Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +MKTGAL+ + GA+ A + E++ + +G+ FQ+ DD+LD D Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVGLAFQVVDDILDVTADTA 231 >gi|283850298|ref|ZP_06367587.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B] gi|283574324|gb|EFC22295.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B] Length = 299 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 81/235 (34%), Positives = 123/235 (52%), Gaps = 6/235 (2%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + +L + ++ L + A + + LL+A+ Y+LL GGK++R L A Sbjct: 3 VKERLAAQAAEVEVYLKERF--GARMRERGVPESLLAAMEYSLLAGGKRLRPALCLSFAE 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF A+ A E IH YSLIHDDLP+MD+ +RRG+P+ H + E AI+AG+GL Sbjct: 61 LFGAARARAMPFAAGFEIIHTYSLIHDDLPAMDDDDLRRGRPSNHKVFGEAAAILAGDGL 120 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMI 180 LT AF + + ++ + G GM GGQ LD+ + + ++ + Sbjct: 121 LTEAFGCMGRAWPGIAADLVLPALAEAARAAGAAGMGGGQALDMDYTARQGVTLAELARM 180 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q +KTGAL+ +C GAI+A A + R R +GE +G FQ+ DD+LD D Sbjct: 181 QALKTGALITASCVCGAILAGAGEEGVARAREYGEAVGAAFQIVDDILDEIGDAA 235 >gi|260101429|ref|ZP_05751666.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM 20075] gi|260084769|gb|EEW68889.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM 20075] gi|328465627|gb|EGF36850.1| Geranyltranstransferase [Lactobacillus helveticus MTCC 5463] Length = 289 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 75/222 (33%), Positives = 116/222 (52%), Gaps = 17/222 (7%) Query: 19 ILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRV 75 ++DD L A H+ ++ N ++ + Y+++ GGK++R L + +R+ Sbjct: 14 VIDDYL---AKHLASEVDNQKISQIMAYSVMAGGKRLRPLLFLATLNTLGRKIDEPEIRI 70 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+ Sbjct: 71 VCGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEGS 130 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMC 190 +QL+ +T +G GM+GGQ LDI D + ++ +KTG L+ Sbjct: 131 QS------AQLVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKFINQMEWLKTGCLIQ 184 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + E A+ A AS E+ +L F + G +Q+ DDL+D E Sbjct: 185 ASVEMAAVYAKASDIEQVKLIDFAKAFGRSYQIYDDLVDVVE 226 >gi|119472626|ref|ZP_01614617.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7] gi|119444830|gb|EAW26131.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7] Length = 323 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 12/227 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFN 66 ++ I++ ++D+ H Q + L++ + Y + GGK++R L A Sbjct: 3 IKAIQALIESDMNDV--NQLIHAQMRSEVALVNQLGLYIVNSGGKRVRPMLAILAAKALG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + +E IH +L+HDD+ +D +RRG PT + ++ +++ G+ + T Sbjct: 61 YTGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTANAEFGNAASVLVGDFIYTR 118 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 +F+++ ++ +L+ NI +G + Q+++ D E + KT Sbjct: 119 SFQLMVGLG-----KMQIMQILADATNIIAEGEVL-QLMNCNDPDTTEASYMQVIYSKTA 172 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A AI+ + + L +G +LG FQL DD+LD D Sbjct: 173 KLFEAATGLAAIITNNDEATLNALNLYGMHLGTAFQLVDDVLDYNAD 219 >gi|307150008|ref|YP_003885392.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822] gi|306980236|gb|ADN12117.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822] Length = 323 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 13/221 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71 +D L LL + + + L +A + GGK+IR LV + ++ Sbjct: 11 VDKDL-RLLSENLKKLVGARHPILAAAAEHLFDAGGKRIRPALVLLVSRATMLDQDITPR 69 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 R+ E IH SL+HDD+ +D +RR PTV+ +D A++AG+ L + + Sbjct: 70 HRRLAEITEMIHTASLVHDDV--VDEAELRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYL 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 ++ + S+++ Q +++ D I KT +LM Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGEI------QQGINLFDTGITLEAYLEKSYYKTASLMAN 181 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + ++ A+++ + E L +G LG+ FQ+ DD+LD Sbjct: 182 SAKAAAVLSDVPREVTEHLYNYGRYLGLAFQIVDDILDFTS 222 >gi|148559082|ref|YP_001258425.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840] gi|148370339|gb|ABQ60318.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840] Length = 328 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 47 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 105 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 159 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 218 Query: 229 DCEE---DLPK 236 D DL K Sbjct: 219 DYGGSATDLGK 229 >gi|49473966|ref|YP_032008.1| octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse] gi|49239469|emb|CAF25820.1| Octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse] Length = 356 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 57/223 (25%), Positives = 112/223 (50%), Gaps = 15/223 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 +++ +R++ + + ++ M + ++ L+S+ GGK++R + A +F+ + Sbjct: 43 KDDMERVNKFILSM-AKSDIEMIPEISNHLISS------GGKRLRPMITLASAHMFDYQN 95 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +++ A+E +H +L+HDD+ +D +RRGK T + + +I+ G+ LL AF+ Sbjct: 96 DGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTARMIWGNQASILVGDFLLGQAFK 153 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 ++ + I + +L+ I +G + Q+ +++ + I KT AL Sbjct: 154 LMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSAVKNIETSTSDYLKIINAKTAALF 207 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A E G I+A E+ LR +G LG+ FQL DD+LD Sbjct: 208 SAAAEVGPIIAGYKYKERFALREYGTLLGLAFQLIDDVLDYGG 250 >gi|301064156|ref|ZP_07204603.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium NaphS2] gi|300441776|gb|EFK06094.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium NaphS2] Length = 325 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 25/238 (10%) Query: 1 MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFL 57 M G +P + + + +RI+ L+ + + YALLG GK++R + Sbjct: 1 MTGEIPTLALFEAHFERINRELNKVFDSRVPLAKEIGT--------YALLGEGKRLRPLI 52 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 L + E IH SL+HDD+ +DN IRR KP+ + + A+ Sbjct: 53 FVLSCQLCGYGGEDLYPLSTVFEYIHTSSLLHDDV--LDNAEIRRRKPSSNQIWGNQAAV 110 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDE 174 + G+ L + A I S + + SLT M GQ+L+ D Sbjct: 111 LEGDFLFSKALSIAVSANS-------VPFISSLTKA--TMRMSEGQILELVHTDDLETGR 161 Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KT L+ AC GAI++ +S + L FG ++GI FQL DDLLD Sbjct: 162 DTYMQIINAKTAVLISAACGCGAIVSGSSPEIEASLTRFGRSVGIAFQLVDDLLDYTS 219 >gi|299142039|ref|ZP_07035173.1| octylprenyl diphosphate synthase [Prevotella oris C735] gi|298576501|gb|EFI48373.1| octylprenyl diphosphate synthase [Prevotella oris C735] Length = 325 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 12/226 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65 L + I L+D + + H++ LLS + + GGK++R L+ A F Sbjct: 3 YLSLIKEPISAELEDFISLFNQSLS--HDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNF 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 +E +H SL+HDD+ +D RRG+ +V+ YD +++ G+ +L+ Sbjct: 61 GRVSSVTQHAAVGLELLHTASLVHDDV--VDESSERRGQASVNALYDNKVSVLVGDFILS 118 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 A +S +++ S+L +L+ L Q+ +IQ+E I ET + I K KT Sbjct: 119 TALLYVSKTHSEVIVRYLSELGRTLSDGEIL------QLTNIQNEAITETAYYEIIKRKT 172 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 AL GA A AS ++ E R FG+NLGIIFQ+ DD+ D Sbjct: 173 AALFEACAAIGAESAGASHDDVEAARKFGQNLGIIFQIRDDIFDYY 218 >gi|27228290|gb|AAN85596.1| Geranylgeranyl Pyrophosphate Synthase [Pantoea stewartii] Length = 303 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 78/232 (33%), Positives = 119/232 (51%), Gaps = 12/232 (5%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66 ++ ID+ LD LL D + +A+R L GK+IR L+ A Sbjct: 17 EQLLADIDSRLDQLLPVQGER------DCVGAAMREGTLAPGKRIRPMLLLLTARDLGCA 70 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 ++H L + A+E +H SLI DD+P MD+ +RRG+PT+H QY E AI+A LL+ Sbjct: 71 ISHGGLLDLACAVEMVHAASLILDDMPCMDDAQMRRGRPTIHTQYGEHVAILAAVALLSK 130 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184 AF +I+ + L +++ + L+ IG+QG++ GQ D D+ + + + K Sbjct: 131 AFGVIAEAE-GLTPIAKTRAVSELSTAIGMQGLVQGQFKDLSEGDKPRSADAILLTNQFK 189 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 T L C + + +I A+AS +E L F +LG FQL DDL D D K Sbjct: 190 TSTLFCASTQMASIAANASCEARENLHRFSLDLGQAFQLLDDLTDGMTDTGK 241 >gi|289547882|ref|YP_003472870.1| Geranyltranstransferase [Thermocrinis albus DSM 14484] gi|289181499|gb|ADC88743.1| Geranyltranstransferase [Thermocrinis albus DSM 14484] Length = 264 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 15/225 (6%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66 KL ++++ L +L + + L A+ Y L GGK+IR L+ Sbjct: 3 KLSLWKEKVEVKLRQILAPSEPLL-------LYEAMSYYPLQGGKRIRPLLLCGVCDALG 55 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 N A+ VG AIE IH YSLIHDDLP++DN RRG P+ HI + E A++AG+ LLT Sbjct: 56 GNVEDAVVVGCAIELIHNYSLIHDDLPALDNDPQRRGLPSCHIAFGEDIALLAGDALLTL 115 Query: 127 AFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 AF+++S Q++ + ++ ++ G +GM+GGQ++DI+ I K Sbjct: 116 AFQVLSDVSQFNQVEPSDLLLIIHEISRRAGSEGMVGGQVMDIRGIGDRRE----INLKK 171 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 T L S I+A ++ + L G G++FQ+ DD D Sbjct: 172 TAQLFAACFVSAGIIAK-KKSMLKDLEKVGIRTGLLFQMCDDWKD 215 >gi|242373777|ref|ZP_04819351.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis M23864:W1] gi|242348514|gb|EES40116.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis M23864:W1] Length = 332 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 25/229 (10%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH--L 70 K+++ L H + L A + L GGK++R V + + Sbjct: 24 KKVEDRL--------QHAIKSSDQTLEDAAFHLLSSGGKRVRPVFVILSSQFGDSKDTSE 75 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 RV A+E IH +L+HDD+ +D RRG+PT+ ++D+ TAI+ GN LL + Sbjct: 76 NTYRVAVALELIHMATLVHDDV--IDKSDKRRGRPTISKKWDQTTAILTGNFLLALGLQH 133 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGA 187 +S K NI S+ ++ + G++ QD+F + T KT Sbjct: 134 LSEIKDSRVHNIISKSIVD---------VCKGELFQFQDQFNSDQNITNYLRRINRKTAL 184 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ A E GA+ ++AS +L+ G +G+ FQ+ DD+LD K Sbjct: 185 LIQLATEVGALTSNASDEVVRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 233 >gi|296116309|ref|ZP_06834925.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295977128|gb|EFG83890.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 334 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 56/237 (23%), Positives = 98/237 (41%), Gaps = 12/237 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 M G L++ ++ + + M + A GGK++R L Sbjct: 1 MADGSEVALRDLAEYLADDMAACNRAIVERMDSPVALIPQLAAHLVAAGGKRLRPLLTLA 60 Query: 61 CASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116 A L + + A +E IH +L+HDD+ +D +RRG + + + + Sbjct: 61 SARLCGYEPDATHQRHVALAACVEFIHTATLLHDDV--VDESTLRRGLASANAIFGNKAS 118 Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176 ++ G+ L +F++++ + ++ +LS +G + QM D + Sbjct: 119 VLVGDFLFARSFQLMTDDGS-----LKVMNILSSASATIAEGEVL-QMSTQNDLSTSIEK 172 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT AL AC GA++A +E L +G NLG+ FQL DD LD D Sbjct: 173 YLEVIHGKTAALFAAACRVGAVVADQPLKVEEALDSYGTNLGMAFQLVDDALDYAAD 229 >gi|291570889|dbj|BAI93161.1| solanesyl diphosphate synthase [Arthrospira platensis NIES-39] Length = 323 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 13/221 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71 ++ L LL + + L +A + + GK++R +V + +H Sbjct: 11 VEADLK-LLTDNLKQLVGARHPILYAAAEHLFSVQGKRVRPAIVLLISRATMPDHEIIPK 69 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 R+ E IH SL+HDD+ +D +RRG PTVH ++ A++AG+ L + + Sbjct: 70 HRRLAEITEMIHTASLVHDDV--VDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWYL 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 ++ + SQ+++ L Q L+ D + KT +L+ Sbjct: 128 ANLDNLEVVKLLSQVIMDLAEGEI------QQGLNRFDTSLSIEAYLEKSYYKTASLIAN 181 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + ++ +++ S E L +G N+G+ FQ+ DD+LD Sbjct: 182 SSKAAGLLSGVSAELAEDLYKYGRNIGLAFQIVDDILDFTG 222 >gi|152985492|ref|YP_001350541.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7] gi|150960650|gb|ABR82675.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7] Length = 322 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 15/227 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + E+ +D I+ L ++ D ++SA GGK++R LV Sbjct: 10 VAEDFTAVDGIIRRQLTSRVPLVEKIG-DYIISA------GGKRLRPLLVLLAGKTLGYK 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + A IE +H +L+HDD+ +D +RRG+ T + + +++ G+ L +F Sbjct: 63 GDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSF 120 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 E++ + + ++S + +G + Q+ ++D E + + KT L Sbjct: 121 EMMVELGS-----MPVMRIISQATRVIAEGEVL-QLSKVRDASTTEETYMEVIRGKTAML 174 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + S A + A + + E LR FG+ LGI FQL DDLLD D Sbjct: 175 FEASTHSAAALCRAGEEQAEALRRFGDYLGIAFQLVDDLLDYRGDAA 221 >gi|71066490|ref|YP_265217.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4] gi|71039475|gb|AAZ19783.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4] Length = 335 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 25/224 (11%) Query: 33 TQHNDRLLSAIRYALLG-GKKIRSFLVTEC------------------ASLF--NVNHLT 71 + LL A RY + G GK +R LV A+L + ++ Sbjct: 42 AELPSPLLDACRYVMTGTGKLVRPLLVASAFASTYSHNDTIADKDNALATLLENDSDYDM 101 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 + R A+E +H YSL+HDDLP MD+ +RRG+PT HI + E TA++AG+ L T AFE++ Sbjct: 102 SRRAALAVELLHTYSLVHDDLPCMDDDELRRGQPTAHIVFAEATALLAGDVLQTLAFEVL 161 Query: 132 -SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGA 187 + T + L + M+ GQMLD+ E I ++ + I + KTGA Sbjct: 162 TAEMPTFAPFDSDIASQLFAIFAPRARRMVSGQMLDLNAEATTGISQSDLEAIHRDKTGA 221 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 L+ A G I A A+ ++ L+ +++G+ FQ+ DD+LD Sbjct: 222 LIEAAMLMGGICAGATATQRMALQECAQHIGLAFQVQDDILDVT 265 >gi|304314300|ref|YP_003849447.1| geranyl pyrophosphate synthase [Methanothermobacter marburgensis str. Marburg] gi|2497458|sp|Q53479|IDSA_METTM RecName: Full=Bifunctional short chain isoprenyl diphosphate synthase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase; AltName: Full=Geranyltranstransferase gi|11279236|pir||T45152 bifunctional short chain isoprenyl diphosphate synthase [imported] - Methanobacterium thermoautotrophicum gi|913252|gb|AAB32421.1| bifunctional short chain isoprenyl diphosphate synthase [Methanothermobacter thermautotrophicus] gi|302587759|gb|ADL58134.1| predicted geranyl pyrophosphate synthase [Methanothermobacter marburgensis str. Marburg] Length = 325 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 123/233 (52%), Gaps = 14/233 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65 +++ + ++ + D +++ S + D LL A + + GGKKIR L Sbjct: 2 TEVLDILRKYSEVADKRIMECISDI---TPDTLLKASEHLITAGGKKIRPSLALLSCEAV 58 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 N A V AAIE IH +SLIHDD+ MD+ +RRG+P+VH+ + E AI+AG+ L + Sbjct: 59 GGNPEDAAGVAAAIELIHTFSLIHDDI--MDDDEMRRGEPSVHVIWGEPMAILAGDVLFS 116 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182 AFE + D+ R + L++ + ++ + GQ LD+ E + E + + Sbjct: 117 KAFEAVIRNG----DSERVKDALAVVVDSCVK-ICEGQALDMGFEERLDVTEDEYMEMIY 171 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT AL+ A ++GAIM AS+ E E L +G+ +G+ FQ+ DD LD D Sbjct: 172 KKTAALIAAATKAGAIMGGASEREVEALEDYGKFIGLAFQIHDDYLDVVSDEE 224 >gi|306842306|ref|ZP_07474966.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO2] gi|306287563|gb|EFM59019.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO2] Length = 322 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 41 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 98 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 99 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 152 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 153 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 212 Query: 229 DCEE---DLPK 236 D DL K Sbjct: 213 DYSGSAADLGK 223 >gi|85714244|ref|ZP_01045232.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] gi|85698691|gb|EAQ36560.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A] Length = 336 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 8/188 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L + +++ A++E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAMANLAGYSGEGHVKLAASVEFMHTATLLHDDV--VDESELRRGKLSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +R+ +LS +G + Q+ + Sbjct: 113 MVWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSSAAATIAEGEVM-QLAAAK 166 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + + KT L ACE G ++ + E+ FG NLGI FQL DD+L Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPVLGGRPKAEETAAASFGMNLGIAFQLVDDVL 226 Query: 229 DCEEDLPK 236 D K Sbjct: 227 DYGGKSAK 234 >gi|56417209|ref|YP_154283.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St. Maries] gi|56388441|gb|AAV87028.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St. Maries] Length = 327 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 69/235 (29%), Positives = 109/235 (46%), Gaps = 14/235 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALL-GGKKIRSFL 57 M+ L + + L+DL + T ++D + I + +L GGK+IR L Sbjct: 1 MSDAFNRALIDLKSLV---LEDLQAMEQLIVDTSNSDISYIADIISHLMLSGGKRIRPIL 57 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 + + + +R+ AAIE IH +L+HDD+ +D +RRG T + + +I Sbjct: 58 LLAVCKMLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKTSNSLWGNKASI 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 + G+ LL AF+ I S N +LS + G + QM+ ++ I + Sbjct: 116 LVGDFLLAAAFQWIVSCG-----NFELLTVLSGASRTIVAGEI-QQMVYSKNLDITREKY 169 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KT AL CES +++ + +E LR FG N GI FQ+ DDLLD Sbjct: 170 IEIISAKTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVDDLLDYTA 224 >gi|281424797|ref|ZP_06255710.1| octylprenyl diphosphate synthase [Prevotella oris F0302] gi|281401167|gb|EFB31998.1| octylprenyl diphosphate synthase [Prevotella oris F0302] Length = 325 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 12/226 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65 L + I L+D + + H++ LLS + + GGK++R L+ A F Sbjct: 3 YLSLIKEPISAELEDFISLFNQSLS--HDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNF 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 +E +H SL+HDD+ +D RRG+ +V+ YD +++ G+ +L+ Sbjct: 61 GRVSSVTQHAAVGLELLHTASLVHDDV--VDESSERRGQASVNALYDNKVSVLVGDFILS 118 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 A +S +++ S+L +L+ L Q+ +IQ+E I ET + I K KT Sbjct: 119 TALLYVSKTHSEVIVRYLSELGRTLSDGEIL------QLTNIQNEAITETAYYEIIKRKT 172 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 AL GA A AS ++ E R FG+NLGIIFQ+ DD+ D Sbjct: 173 AALFEACAAIGAESAGASHDDVEAARKFGQNLGIIFQIRDDIFDYY 218 >gi|71735497|ref|YP_273004.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556050|gb|AAZ35261.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 322 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + +++ G+ L + +FE++ + + +LS I +G + Q+ I Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMRILSKATRIIAEGEVL-QLSKI 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A + +A + + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|62289388|ref|YP_221181.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str. 9-941] gi|189023639|ref|YP_001934407.1| polyprenyl synthetase [Brucella abortus S19] gi|254693184|ref|ZP_05155012.1| hypothetical protein Babob3T_00652 [Brucella abortus bv. 3 str. Tulya] gi|254696828|ref|ZP_05158656.1| hypothetical protein Babob28_03708 [Brucella abortus bv. 2 str. 86/8/59] gi|254707866|ref|ZP_05169694.1| hypothetical protein BpinM_13091 [Brucella pinnipedialis M163/99/10] gi|254709549|ref|ZP_05171360.1| hypothetical protein BpinB_04602 [Brucella pinnipedialis B2/94] gi|254713033|ref|ZP_05174844.1| hypothetical protein BcetM6_06634 [Brucella ceti M644/93/1] gi|254716613|ref|ZP_05178424.1| hypothetical protein BcetM_09363 [Brucella ceti M13/05/1] gi|256031043|ref|ZP_05444657.1| hypothetical protein BpinM2_10374 [Brucella pinnipedialis M292/94/1] gi|256060537|ref|ZP_05450705.1| hypothetical protein Bneo5_09318 [Brucella neotomae 5K33] gi|256254446|ref|ZP_05459982.1| hypothetical protein BcetB_09183 [Brucella ceti B1/94] gi|256256948|ref|ZP_05462484.1| hypothetical protein Babob9C_06236 [Brucella abortus bv. 9 str. C68] gi|260168175|ref|ZP_05754986.1| polyprenyl synthetase family protein [Brucella sp. F5/99] gi|306839902|ref|ZP_07472700.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. NF 2653] gi|306845036|ref|ZP_07477617.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO1] gi|62195520|gb|AAX73820.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str. 9-941] gi|189019211|gb|ACD71933.1| Polyprenyl synthetase [Brucella abortus S19] gi|306274668|gb|EFM56457.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. BO1] gi|306405088|gb|EFM61369.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella sp. NF 2653] gi|326408435|gb|ADZ65500.1| Polyprenyl synthetase [Brucella melitensis M28] gi|326538151|gb|ADZ86366.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 338 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 115 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 169 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 228 Query: 229 DC---EEDLPK 236 D DL K Sbjct: 229 DYGGSAADLGK 239 >gi|283957030|ref|ZP_06374502.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336] gi|283791531|gb|EFC30328.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336] Length = 281 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%) Query: 48 LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 95 LHKSYDEPTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152 Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ Sbjct: 153 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEENNQIYKLGLKLGLIFQIN 212 Query: 225 DDLLDCE 231 DD++D Sbjct: 213 DDIIDVT 219 >gi|148552951|ref|YP_001260533.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1] gi|148498141|gb|ABQ66395.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1] Length = 297 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 103/237 (43%), Positives = 143/237 (60%), Gaps = 9/237 (3%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59 M+ L S+L ++ ID D LL +RL +A+R+A + GGK++R L Sbjct: 1 MSALLASELARIAQEIDARFDTLLTP-----PDDSRERLYAAMRHAAIGGGKRLRPLLAC 55 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 A LF V+ ALR G AIE IH YSLIHDDLP+MD+ +RRG+PTVH YDE TAI+A Sbjct: 56 ASARLFAVDPECALRAGLAIEAIHVYSLIHDDLPAMDDDDLRRGRPTVHRAYDEATAILA 115 Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176 G+G AFEI +S T +RS+L+ +L G GM+GGQ +D+ E D Sbjct: 116 GDGFQALAFEIAASEATHPDPFVRSELVAALAAAAGPAGMVGGQAMDMAAEAGGEHDLDA 175 Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + +Q++KTGAL+ F+ E+GAI+ + +LR + +LG+ FQ+ADDLLD E D Sbjct: 176 ISRLQQLKTGALIGFSIEAGAILGRVPPEGRTKLRAYAHDLGLAFQIADDLLDAEGD 232 >gi|291287109|ref|YP_003503925.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM 12809] gi|290884269|gb|ADD67969.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM 12809] Length = 324 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 15/228 (6%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 ++ + ++ L D L + M + + + + GGK++R + A + + Sbjct: 10 VENEREAVEKNLIDNL-DSDVEMVNKVAEYIFES------GGKRLRPVFMILSALMCGYD 62 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 + + +E IH +L+HDD+ +D RRGK + + + ++ G+ L + AF Sbjct: 63 GERTINLAGVVEYIHTATLLHDDV--IDGAKYRRGKESANNVFGNDITVLCGDFLYSRAF 120 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188 + R+Q++L++ +G + Q++ D I I KT + Sbjct: 121 MNLVKDGDS-----RAQMLLAVAARTMSEGEVF-QLIKTADVKITMDDYLRIINSKTAVM 174 Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 CE GAI+ +++ L FG+ LGI FQ+ADD+LD D K Sbjct: 175 FATCCEIGAILGEMPVEKQKALADFGKTLGIAFQMADDILDYLGDPEK 222 >gi|145638300|ref|ZP_01793910.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittII] gi|145272629|gb|EDK12536.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittII] Length = 323 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ ++ ++ +++ N+ +G + Q++++ Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 155 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 214 Query: 229 DCEE 232 D Sbjct: 215 DYSA 218 >gi|291619711|ref|YP_003522453.1| CrtE [Pantoea ananatis LMG 20103] gi|291154741|gb|ADD79325.1| CrtE [Pantoea ananatis LMG 20103] Length = 311 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66 ++ ID LD LL D + +A+R AL GK+IR L+ A Sbjct: 26 EQLLADIDRRLDQLLPVEGER------DVVGAAMREGALAPGKRIRPMLLLLTARDLGCA 79 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V+H L + A+E +H SLI DD+P MD+ +RRG+PT+H Y E AI+A LL+ Sbjct: 80 VSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSK 139 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184 AF +I+ L +++ + L++ IG+QG++ GQ D D+ + M K Sbjct: 140 AFGVIADAD-GLTPLAKNRAVSELSNAIGMQGLVQGQFKDLSEGDKPRSAEAILMTNHFK 198 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 T L C + + +I+A+AS ++ L F +LG FQL DDL D D K Sbjct: 199 TSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAFQLLDDLTDGMTDTGK 250 >gi|254490429|ref|ZP_05103615.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010] gi|224464173|gb|EEF80436.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010] Length = 288 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 78/231 (33%), Positives = 123/231 (53%), Gaps = 10/231 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67 +Q++ +I+ LD L + + RL+ A+RYA L GGK++R+ LV Sbjct: 1 MQQHQAQIELALDKRLTAQ----KQPGSQRLVEAMRYATLGGGKRLRALLVYATGEAMGA 56 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 N + AA+E IH YSL+HDD+P MD+ +RRG+PT H +DE TA++ G+ L T A Sbjct: 57 NPVALDAAAAAVEMIHAYSLVHDDMPIMDDDDLRRGRPTCHKAFDEATALLVGDALQTMA 116 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185 FE + L + ++ L G GM GGQ +D++ + +D + + K+KT Sbjct: 117 FETLCD--NSLTAAQQVLMIKRLAQASGAFGMAGGQAVDLESVGKKLDLNALQSMHKLKT 174 Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 GAL+ + GA+ A +RL + + +G+ FQ+ DD+LD D Sbjct: 175 GALIRASVLLGALAASDYDDETLQRLERYADCIGLAFQVQDDVLDVIADTE 225 >gi|16272821|ref|NP_439042.1| octaprenyl-diphosphate synthase [Haemophilus influenzae Rd KW20] gi|260579972|ref|ZP_05847802.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae RdAW] gi|1170590|sp|P44916|ISPB_HAEIN RecName: Full=Octaprenyl-diphosphate synthase; AltName: Full=All-trans-octaprenyl-diphosphate synthase; AltName: Full=Octaprenyl pyrophosphate synthase; Short=OPP synthase gi|1573899|gb|AAC22540.1| octaprenyl-diphosphate synthase (ispB) [Haemophilus influenzae Rd KW20] gi|260093256|gb|EEW77189.1| heptaprenyl diphosphate synthase component II [Haemophilus influenzae RdAW] gi|309751451|gb|ADO81435.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2866] Length = 329 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ ++ ++ +++ N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220 Query: 229 DCEE 232 D Sbjct: 221 DYSA 224 >gi|329765834|ref|ZP_08257400.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137677|gb|EGG41947.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 283 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74 +I+ LD + + +RY+L GGK+IR +++ A L Sbjct: 21 KINQALDR-------ELSLYSESEFIEPLRYSLEGGKRIRPIILSLAAESVGKIDDNTLA 73 Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134 A+E +H S+IHDD+ +DN +RR + HI+Y T+++ G+ +L +I + Sbjct: 74 ASCAVEFLHMESIIHDDI--IDNETMRRQREPFHIKYGYNTSVLTGDFVLG----LILAI 127 Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194 ++L + ++ + + + M+ ++ E + + + KT A Sbjct: 128 SSRLDNARITKDLATTAMLMSEGEMIESRLE--SSEDVTFDDYLKVIEYKTATAFEVAAR 185 Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229 GAI+A S+ E E L +G+N+GI +Q+ DDLLD Sbjct: 186 IGAIIASGSEEEIEALTEYGKNIGIAYQIRDDLLD 220 >gi|331008742|gb|EGH88798.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 322 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 8/188 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R LV C + A IE +H +L+HDD+ M +RRG+ T Sbjct: 42 AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + + ++ G+ L + +FE++ + + +LS I +G + Q+ I Sbjct: 100 NALWGNAPRVLVGDFLYSRSFEMMVELGS-----MEVMRILSKATRIIAEGEVL-QLSKI 153 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 +D E + + KT L + S A + +A + + E LR FG++LG+ FQL DDL Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDL 213 Query: 228 LDCEEDLP 235 LD D Sbjct: 214 LDYRGDAE 221 >gi|254701208|ref|ZP_05163036.1| hypothetical protein Bsuib55_10162 [Brucella suis bv. 5 str. 513] Length = 338 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 115 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 169 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 228 Query: 229 DC---EEDLPK 236 D DL K Sbjct: 229 DYGGSAADLGK 239 >gi|328466279|gb|EGF37436.1| heptaprenyl diphosphate synthase component II [Listeria monocytogenes 1816] Length = 312 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 18/232 (7%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NV 67 +Q++ ++ L L A+ + LL A GGK+IR V A L N Sbjct: 1 MQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARLAPNA 54 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + AIE IH S++HDD+ +DN +RRG+ T+ ++ A+ G+ L + Sbjct: 55 DFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETIKSKWGNHIAMYTGDFLFAKS 112 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 E ++ K ++ + MLS G + Q+ D + K KT Sbjct: 113 LEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKRKTAL 166 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K Sbjct: 167 LIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 218 >gi|156741272|ref|YP_001431401.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] gi|156232600|gb|ABU57383.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941] Length = 338 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 10/233 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 + + ++ + D + H+ + D + + GK +R L Sbjct: 9 AIEAAMRAAFPQADERVARFYAMQEYHLGWRDEDLQPA----SFAPGKLLRPRLCLLSCR 64 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + AL + AAI+ +H +SLIHDD+ D RRG+PTV + I G+G+ Sbjct: 65 VVGGDPRDALPLAAAIQLLHDFSLIHDDIQ--DQSDTRRGRPTVWKLWGLAQGINTGDGM 122 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180 T A + +L L + GQ LD+ E IDE+ + Sbjct: 123 FTIAHLALHRLSLTGVPPATVLDVLRRFDETILT-ICEGQFLDLSYEGNLQIDESAYLAM 181 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 + KT AL+ + E GA++ A + + L FG LG+ FQ+ DD+L D Sbjct: 182 IERKTAALIAASAELGALVGGADEETIQALFDFGRALGLAFQIEDDVLGIWGD 234 >gi|90425826|ref|YP_534196.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB18] gi|90107840|gb|ABD89877.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB18] Length = 336 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 19/236 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60 L + + +R++ ++ L +T S M + + L+S+ GGK++R L Sbjct: 16 DQLVELVAADMERVNAVI---LSRTGSEVTMIPEVANHLISS------GGKRLRPNLTLA 66 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A L + +++ AA+E +H +L+HDD+ +D +RRGK + + + +++ G Sbjct: 67 MAQLTGYSGEGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSARMLWGNEASVLVG 124 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180 + LL AF ++ + +R+ +LS +G + Q+ ++ E + + Sbjct: 125 DFLLGQAFRMMVEVGS-----LRALDILSSAAATIAEGEVM-QLAAAKNTATTEDEYLAV 178 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + KT L ACE G +A + E+ R FG NLGI FQL DD+LD K Sbjct: 179 IRGKTAELFAAACEVGPAIAGRPKAEQSACRSFGMNLGIAFQLVDDVLDYGGKAAK 234 >gi|332200654|gb|EGJ14726.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA41317] Length = 291 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 15/234 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57 Query: 69 HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L + Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDS 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +I+ L I+ L+ +L+ G GM+ GQ+LD++ E + ++ I KT Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 G L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD E++ K Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229 >gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera] Length = 301 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 36/228 (15%) Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60 + + + + LD+ + + ++ A+RY+LL GGK+ Sbjct: 67 TFNFKDYMIQKASSVHKALDEAVY-------VKSPIKIHEAMRYSLLAGGKR-------- 111 Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120 A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG Sbjct: 112 ---------SNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 162 Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177 + LL +AFE +++ + + + + L +IG +G++ GQ++DI + Q+ Sbjct: 163 DSLLAFAFEHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQL 222 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEK--------ERLRCFGENL 217 I KT AL+ A GA++ S E E+ R F ENL Sbjct: 223 EFIHIHKTAALLEAAVVLGALLGGGSDEEATYPKLMGLEKSREFAENL 270 >gi|315127756|ref|YP_004069759.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas sp. SM9913] gi|315016270|gb|ADT69608.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas sp. SM9913] Length = 323 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 12/227 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFN 66 ++ I++ ++D+ H Q + + L++ + Y + GGK++R L A Sbjct: 3 IKAIQALIESDMNDV--NQLIHAQMRSDVALVNQLGLYIVNSGGKRVRPMLAILAAKALG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + IE IH +L+HDD+ +D +RRG PT + ++ +++ G+ + T Sbjct: 61 YQGKDHITLATIIEFIHTATLLHDDV--VDESNLRRGTPTANAEFGNAASVLVGDFIYTR 118 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 +F+++ ++ +L+ NI +G + Q+++ D E + KT Sbjct: 119 SFQLMVGLG-----KMQIMQVLADATNIIAEGEVL-QLMNCNDPDTTEASYMQVIYSKTA 172 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A AI+ + E L +G +LG FQL DD+LD D Sbjct: 173 KLFEAATGLAAIITDQDDSVLEALNLYGMHLGTAFQLVDDVLDYNAD 219 >gi|311030284|ref|ZP_07708374.1| heptaprenyl diphosphate synthase component II [Bacillus sp. m3-13] Length = 320 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 15/226 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 S L + + I+ L + +QT + + + LL A GGK+IR V A L Sbjct: 8 SFLNNDLQIIENEL-EATIQTERALLQEASLHLLQA------GGKRIRPVFVLLAAKLGA 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + V A+E +H SL+HDD+ +D+ +RRGK T+ ++D A+ G+ + Sbjct: 61 YDIHKVKNVAVALELMHMASLVHDDV--IDDAELRRGKSTIKAKWDNRIAMYTGDYIFAR 118 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 + E+++ ++I + +LS T +G + Q+ D + + K KT Sbjct: 119 SLEMMTK-----VEDIEAHRILSNTLVELCKGEIE-QIRDKYNYDQNLRTYLRRIKRKTA 172 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 L+ +C+ GAI + + + L FG +G+ FQ+ DD+LD Sbjct: 173 ILIAVSCQLGAITSGVPASVHQSLYWFGYYVGMSFQITDDILDFTS 218 >gi|219871055|ref|YP_002475430.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165] gi|219691259|gb|ACL32482.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165] Length = 327 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A+ + A +E IH +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLIAVLAANTVGYKGQEHITCAAFVEFIHTATLLHDDV--VDESDMRRGRETAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++S + + ++S N+ +G + Q++++ Sbjct: 105 ARFGNAASVLVGDFIYTRAFQMMASLCS-----LDVLQVMSDATNVIAEGEV-QQLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + KT L A + AI++ A Q +R +G LG FQL DD+L Sbjct: 159 NPETTEANYMQVIYSKTARLFEAASQCSAIVSGADQATVIAMRDYGRYLGTAFQLVDDIL 218 Query: 229 DCEE 232 D Sbjct: 219 DYSA 222 >gi|126695982|ref|YP_001090868.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9301] gi|126543025|gb|ABO17267.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9301] Length = 323 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 11/227 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + E + ++ LDDL+L+ + + H +A GGK++R +V + + Sbjct: 4 VTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPE 63 Query: 69 ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L Sbjct: 64 FCLTTKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 A +++ + S++++ L Q L+ D + KT Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEI------KQNLNRFDSAQSFPKYINKSYCKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +L+ +C++ +++ + L FG+N+G+ FQ+ DD+LD Sbjct: 176 ASLIANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILDFTG 222 >gi|90408282|ref|ZP_01216447.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3] gi|90310583|gb|EAS38703.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3] Length = 325 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A NV+ ++ A IE +H +L+HDD+ +D +RRGK T + Sbjct: 45 GGKRIRPLITILAAKALNVHSEKITKLAAIIEFVHTATLLHDDV--VDESDLRRGKKTAN 102 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F+++S + N++ +LS NI +G + Q+++ Sbjct: 103 ALFGNAASVLVGDFLYTRSFQMMSELQ-----NLKVMDVLSRATNIIAEGEVL-QLMNCN 156 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D I E I KT L A + ++A + + L +G+ LG FQL DD++ Sbjct: 157 DANISEKLYMDIIYYKTAKLFEAATQLVGVLAEQTPEIELALLNYGKYLGTAFQLTDDVM 216 Query: 229 DCEE 232 D Sbjct: 217 DYTS 220 >gi|225626910|ref|ZP_03784949.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella ceti str. Cudo] gi|225618567|gb|EEH15610.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella ceti str. Cudo] Length = 363 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 82 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 139 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 140 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 193 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 194 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 253 Query: 229 DC---EEDLPK 236 D DL K Sbjct: 254 DYGGSAADLGK 264 >gi|163792420|ref|ZP_02186397.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] gi|159182125|gb|EDP66634.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium BAL199] Length = 340 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 8/227 (3%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66 + + + +D + + HMQ+ A GGK++R L A L Sbjct: 17 ASVDALRRLVDANMLKVNRAILEHMQSPVALIPQLAGHIVASGGKRLRPMLTLATAGLCG 76 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + Sbjct: 77 YTGERHIGLAACVEFIHTATLLHDDV--VDESDLRRGQDTANAVWGNQASVLVGDFLFSR 134 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 AF+++ + ++ +LS I +G + Q++ D E + + KT Sbjct: 135 AFQLMVGDGS-----LKVLKILSDASAIIAEGEVH-QLITTNDIDTTEAAYLEVIRCKTA 188 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A + G ++A + E+ L FG +LG+ FQL DD+LD + Sbjct: 189 QLFAAAAQIGPVVAERPEAEEMALEGFGRDLGVAFQLVDDVLDYAAE 235 >gi|157415864|ref|YP_001483120.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116] gi|157386828|gb|ABV53143.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116] gi|307748501|gb|ADN91771.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni M1] Length = 281 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%) Query: 48 LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 95 LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152 Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ Sbjct: 153 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212 Query: 225 DDLLDCE 231 DD++D Sbjct: 213 DDIIDVT 219 >gi|222475573|ref|YP_002563990.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Florida] gi|255003563|ref|ZP_05278527.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Puerto Rico] gi|222419711|gb|ACM49734.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Florida] Length = 327 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 14/235 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA---IRYALLGGKKIRSFL 57 M+ L + + L+DL + T ++D A L GGK+IR L Sbjct: 1 MSDAFNRALIDLKSLV---LEDLQAMEQLIVDTSNSDISYIADIVSHLMLSGGKRIRPIL 57 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 + + + +R+ AAIE IH +L+HDD+ +D +RRG T + + +I Sbjct: 58 LLAVCKMLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKTSNSLWGNKASI 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 + G+ LL AF+ I S N +LS + G + QM+ ++ I + Sbjct: 116 LVGDFLLAAAFQWIVSCG-----NFELLTVLSGASRTIVAGEI-QQMVYSKNLDITREKY 169 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KT AL CES +++ + +E LR FG N GI FQ+ DDLLD Sbjct: 170 IEIISAKTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVDDLLDYTA 224 >gi|167043490|gb|ABZ08187.1| putative Polyprenyl synthetase [uncultured marine microorganism HF4000_APKG2H5] Length = 575 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 16/228 (7%) Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70 + KR++ I+ D L + +RL A+ + GG K++R+ + H Sbjct: 259 HRKRVEGIIMDSLGKM-------QQERLHGAMTHLFAGGGKRLRAIIPRLVGEAVGEAHD 311 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 +GA+IE IH ++L+HDD+ +D IRRG VH+ YD+ TAI AG+ +L FEI Sbjct: 312 GHYTLGASIEIIHNFTLVHDDI--IDQDPIRRGLDAVHVAYDDATAINAGDAMLAVGFEI 369 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGA 187 ++ D + L T ++ + GQ DI+ E + E + KT A Sbjct: 370 LAESPEIDADKLA---FLVSTIGEMVRKVAEGQQDDIEFEQRNTVTEEDYIAMITGKTSA 426 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + +GAI+A AS + + +G NLG+ FQL DDL+D D Sbjct: 427 MFETCATTGAILAGASDEIVDNMAIWGLNLGLCFQLMDDLIDITGDTE 474 >gi|194396799|ref|YP_002037809.1| geranyltranstransferase [Streptococcus pneumoniae G54] gi|194356466|gb|ACF54914.1| geranyltranstransferase [Streptococcus pneumoniae G54] Length = 291 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 15/234 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57 Query: 69 HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L + Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDS 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +I+ L I+ L+ +L+ G GM+ GQ+LD++ E + ++ I KT Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQXLSLEELQTIHANKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 G L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD E++ K Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229 >gi|147677304|ref|YP_001211519.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] gi|146273401|dbj|BAF59150.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum thermopropionicum SI] Length = 321 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 23/239 (9%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L +++ + + ++ L ++QT + + T+ + LL+A GGK++R L A Sbjct: 3 ELFDEIKGDLQVVEEEL-RAVVQTQNPLLTETSTHLLNA------GGKRLRPALCLFGAK 55 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 +N N L + A+E IH +L+HDD+ +D RRG PTV ++ + G L Sbjct: 56 FYNYNLEKVLPLAVALELIHMATLVHDDV--VDASMTRRGIPTVKAKWGNSISTHVGTYL 113 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMI 180 + ++S + +++ + M G++ I F + Sbjct: 114 FAKSLILLSKYEKT--------PIIARVLSSISVKMCEGEIQQISSSFNICQSIKEYLHR 165 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236 K+KT L+ + + GA A + LR +G N+G+ FQ+ DD+LD E L K Sbjct: 166 IKLKTALLIAASIQLGAAACGAPVSIHLPLRRYGHNIGMAFQITDDILDMVAEESQLGK 224 >gi|89093572|ref|ZP_01166520.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92] gi|89082262|gb|EAR61486.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92] Length = 322 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 104/197 (52%), Gaps = 12/197 (6%) Query: 44 RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 Y + GGK++R LV A+ + + A IE IH +L+HDD+ +DN +RR Sbjct: 37 HYIVESGGKRLRPLLVLLAANAAGYKGDKHVPLAAIIEFIHTATLLHDDV--VDNSDLRR 94 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 GK T + ++ +++ G+ L + AF+I+ + ++ ++S N+ +G + Sbjct: 95 GKDTANAKWGNAPSVLVGDFLYSRAFQIMVEIGS-----MQIMEVISNATNVIAEGEVL- 148 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q+L+ ++ E + KT L A E+GAI+A A+ E+E LR +G +LG FQ Sbjct: 149 QLLNTKNPDTTEEAYMQVILGKTAMLFEAATEAGAILADATAEEREGLRLYGLHLGTAFQ 208 Query: 223 LADDLLDC---EEDLPK 236 L DD++D E++ K Sbjct: 209 LIDDVMDYLSTAEEMGK 225 >gi|331084735|ref|ZP_08333823.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410829|gb|EGG90251.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 296 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 12/237 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59 MN + ++ ++ I+ IL L Q ++ A+ Y+L+ GGK++R L+ Sbjct: 1 MN--FRDEKRKKTEEIEQILKAYLPVQEGKQQV-----IMEAMEYSLMAGGKRLRPMLLW 53 Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119 E +F T AAIE IH YSL+HDDLP+MD+ RRG+ T HI Y E I+A Sbjct: 54 ETFQMFGSAAKTVRPFMAAIEMIHTYSLVHDDLPAMDDDDYRRGRKTTHIVYGEDMGILA 113 Query: 120 GNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175 G+ LL YAFE + + + + + L G+ GM+GGQ++D+ + I E Sbjct: 114 GDALLNYAFETACTAFEEAPEEATRIGKALQVLAKKAGIYGMIGGQVVDVSASGKNITED 173 Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + I ++KTGAL+ A GAI+A A + E + + +GI FQ+ DD+LD Sbjct: 174 ILSFIYELKTGALLESAMMIGAILAGAEEEEVAVIEQVAKKIGIAFQIQDDILDVTS 230 >gi|57238655|ref|YP_179786.1| geranyltranstransferase [Campylobacter jejuni RM1221] gi|57167459|gb|AAW36238.1| geranyltranstransferase [Campylobacter jejuni RM1221] gi|315059094|gb|ADT73423.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Campylobacter jejuni subsp. jejuni S3] Length = 281 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%) Query: 48 LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 95 LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152 Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ Sbjct: 153 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212 Query: 225 DDLLDCE 231 DD++D Sbjct: 213 DDIIDVT 219 >gi|84515724|ref|ZP_01003085.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53] gi|84510166|gb|EAQ06622.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53] Length = 332 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 14/217 (6%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75 ++ ++ D + + Q L+ A GGK++R L A + + + + Sbjct: 25 VNAMIRDRMASEHAPRIPQVTAHLVEA------GGKRLRPMLTLAAARMCGYDGPYHIHL 78 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L +F+++ Sbjct: 79 AATVEFIHTATLLHDDV--VDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETG 136 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195 + +R +L+ +G + Q+ D E + + KT AL A E Sbjct: 137 S-----LRVLDILANASATIAEGEVL-QLTAAADLATTEDIYIKVVRGKTAALFSAAMEV 190 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G +A K+ L +G+ LGI FQ+ DDLLD Sbjct: 191 GGEIAGQDPAIKQALFDYGDALGISFQIVDDLLDYGG 227 >gi|315121918|ref|YP_004062407.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495320|gb|ADR51919.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 322 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 9/197 (4%) Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97 + ++Y + GGK++R L A + + + AIE IH +L+HDD+ +D+ Sbjct: 30 IPDVVKYLIFSGGKRLRPMLTVATALMLEYRGNNHVLLACAIEFIHTATLLHDDV--VDD 87 Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157 +RRGK + + +++ G+ LL+ AF ++ K+Q + S + +L+ Sbjct: 88 SALRRGKAAARLVWGNQASVLVGDFLLSQAFSMVIETKSQEALKVLSLVACTLSEGE--- 144 Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217 Q+ ++ + E + K KT AL A E ++++ A + ++ L+ +G NL Sbjct: 145 ---LRQLSISKNLNVTEEDYLYVIKSKTAALFVAALEVSSLISGAQDSVRDALKSYGTNL 201 Query: 218 GIIFQLADDLLDCEEDL 234 GI FQL DD LD ++ Sbjct: 202 GIAFQLVDDALDYRGEV 218 >gi|282901404|ref|ZP_06309329.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505] gi|281193683|gb|EFA68655.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505] Length = 323 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 13/221 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL- 73 ++ L +L + + + L +A + GGK+IR +V + + +L Sbjct: 11 VEADL-RILADNLTQLVGNRHPILYAAAEHLFGAGGKRIRPAIVLLISRATTLEEDISLG 69 Query: 74 --RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 R+ E IH SL+HDD+ +D IRRG PTVH + A++AG+ L + + Sbjct: 70 HRRLAEITEMIHTASLVHDDV--VDESDIRRGVPTVHSLFGNRIAVLAGDFLFAQSSWYL 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 ++ + S++++ L Q L+ D + KT +L+ Sbjct: 128 ANLDNLEVVKLLSEVIMDLAAGEI------QQGLNRFDTNLSIETYLKKSYYKTASLIAN 181 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + ++ I+++ S L +G++LG+ FQ+ DD+LD Sbjct: 182 SAKAAGILSNVSSESANNLYNYGKDLGLAFQIVDDILDFTG 222 >gi|33519569|ref|NP_878401.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus] gi|33517232|emb|CAD83615.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus] Length = 324 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 12/220 (5%) Query: 15 RIDTILDDLLLQTASHMQTQHNDRLL---SAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70 +I+ ++ ++ + + ++ I+Y + GGKKIRS ++ A N Sbjct: 5 QINKLIKQDIININFEIHKRLKSNIILINKFIKYIINSGGKKIRSTMILLIAKSLTYNKT 64 Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130 + IE IH +L+HDD+ +D+ RRGK T +I + +I+ G+ + T AF++ Sbjct: 65 QHTILATLIEFIHTATLLHDDV--IDHSTTRRGKTTANIIFGNPASILIGDFIYTRAFQM 122 Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190 ++ ++ +R +++ NI +G + Q+ D I I KT L Sbjct: 123 MTELQS-----LRILSLMADAVNIIAEGEIL-QLTYCNDPTITMNNYMQIIYKKTARLFE 176 Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230 A +S AI+AHA+ +++ L +G+ +GI FQL DDLLD Sbjct: 177 VASQSSAILAHANIQQEQALSNYGKYIGIAFQLIDDLLDY 216 >gi|117509|sp|P21684|CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; AltName: Full=Farnesyltranstransferase gi|216682|dbj|BAA14124.1| crtE [Pantoea ananatis] gi|325559605|gb|ADZ30887.1| geranylgeranyl pyrophosphate synthase [MoClo level 2 destination vector pL2-1] gi|325559616|gb|ADZ30895.1| geranylgeranyl pyrophosphate synthase [MoClo end-linker vector pELR-1] Length = 302 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66 ++ ID LD LL D + +A+R AL GK+IR L+ A Sbjct: 17 EQLLADIDRRLDQLLPVEGER------DVVGAAMREGALAPGKRIRPMLLLLTARDLGCA 70 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V+H L + A+E +H SLI DD+P MD+ +RRG+PT+H Y E AI+A LL+ Sbjct: 71 VSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSK 130 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184 AF +I+ L +++ + L++ IG+QG++ GQ D D+ + M K Sbjct: 131 AFGVIADAD-GLTPLAKNRAVSELSNAIGMQGLVQGQFKDLSEGDKPRSAEAILMTNHFK 189 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 T L C + + +I+A+AS ++ L F +LG FQL DDL D D K Sbjct: 190 TSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAFQLLDDLTDGMTDTGK 241 >gi|91070262|gb|ABE11181.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone HF10-11H7] Length = 323 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 11/227 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + E + ++ LDDL+L+ + + H +A GGK++R +V + + Sbjct: 4 VTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPE 63 Query: 69 ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L Sbjct: 64 FCLTTKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 A +++ + S++++ L Q L+ D ++ KT Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEI------KQNLNRFDSAQSFSKYINKSYCKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +L+ +C++ +++ + L FG+N+G+ FQ+ DD+LD Sbjct: 176 ASLIANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILDFTG 222 >gi|23501305|ref|NP_697432.1| polyprenyl synthetase family protein [Brucella suis 1330] gi|161618375|ref|YP_001592262.1| hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365] gi|254703754|ref|ZP_05165582.1| hypothetical protein Bsuib36_07492 [Brucella suis bv. 3 str. 686] gi|260566991|ref|ZP_05837461.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261754401|ref|ZP_05998110.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] gi|23347194|gb|AAN29347.1| polyprenyl synthetase family protein [Brucella suis 1330] gi|161335186|gb|ABX61491.1| Hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365] gi|260156509|gb|EEW91589.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40] gi|261744154|gb|EEY32080.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686] Length = 340 Score = 181 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 59 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + +L+ + +I +G + Q+ + Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----FDALDVLATSASIIAEGEVM-QLAAAK 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230 Query: 229 DC---EEDLPK 236 D DL K Sbjct: 231 DYGGSAADLGK 241 >gi|149008192|ref|ZP_01831697.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74] gi|225858990|ref|YP_002740500.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae 70585] gi|307127203|ref|YP_003879234.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B] gi|147760373|gb|EDK67353.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74] gi|225720031|gb|ACO15885.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae 70585] gi|306484265|gb|ADM91134.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B] gi|332074540|gb|EGI85014.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA17545] Length = 291 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 15/234 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57 Query: 69 HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L + Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDS 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +I+ L I+ L+ +L+ G GM+ GQ+LD++ E + ++ I KT Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 G L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD E++ K Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229 >gi|292490245|ref|YP_003525684.1| trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4] gi|291578840|gb|ADE13297.1| Trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4] Length = 322 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 19/226 (8%) Query: 22 DLLLQTASHMQTQHNDRLLSAI-------RYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73 DL+ + RL S + Y + GGK++R +V A F+ + Sbjct: 8 DLIADDMQAVNGLIQKRLHSDVVLINQLGHYIINSGGKRLRPVVVLLSARAFDYQGSCHI 67 Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133 + IE IH +L+HDD+ +D+ +RRG+ T + + +++ G+ L + AFE++ Sbjct: 68 DIATIIEFIHTATLLHDDV--VDSSELRRGQKTANSIWGSEASVLVGDFLYSRAFEMMVD 125 Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193 +++R +L+ T N +G + Q+L+ D E + + + KT L A Sbjct: 126 -----VNSMRVMEILARTTNTIAEGEVM-QLLNCHDPDTTEERYLDVIRSKTAKLFEAAT 179 Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + GA+++ E+E + +G +LG FQL DD+LD DL K Sbjct: 180 QLGAVLSCRPAAEEEAMAAYGMHLGTAFQLTDDVLDYSASSDDLGK 225 >gi|306825094|ref|ZP_07458436.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432530|gb|EFM35504.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 291 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 12/227 (5%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 QE +++ L+D + Q L A+ Y++ GGK+IR FL+ E V Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLREAVLYSIHAGGKRIRPFLLLEVLESLQVV 57 Query: 69 HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L Sbjct: 58 IRPAYAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +I+ L + I+ L+++L+ G GM+ GQ+LD++ E + ++ I KT Sbjct: 118 YALIAQA--DLPNQIKVDLIVNLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 G L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD Sbjct: 176 GKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTA 222 >gi|82699315|ref|YP_413889.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225851937|ref|YP_002732170.1| hypothetical protein BMEA_A0432 [Brucella melitensis ATCC 23457] gi|254688701|ref|ZP_05151955.1| hypothetical protein Babob68_00654 [Brucella abortus bv. 6 str. 870] gi|254718581|ref|ZP_05180392.1| hypothetical protein Bru83_03399 [Brucella sp. 83/13] gi|254729734|ref|ZP_05188312.1| hypothetical protein Babob42_00662 [Brucella abortus bv. 4 str. 292] gi|256044121|ref|ZP_05447028.1| hypothetical protein Bmelb1R_06464 [Brucella melitensis bv. 1 str. Rev.1] gi|256112919|ref|ZP_05453832.1| hypothetical protein Bmelb3E_09565 [Brucella melitensis bv. 3 str. Ether] gi|256159107|ref|ZP_05456928.1| hypothetical protein BcetM4_09356 [Brucella ceti M490/95/1] gi|256368857|ref|YP_003106363.1| polyprenyl synthetase family protein [Brucella microti CCM 4915] gi|260545860|ref|ZP_05821601.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260563478|ref|ZP_05833964.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260754179|ref|ZP_05866527.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260757399|ref|ZP_05869747.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260761223|ref|ZP_05873566.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260883204|ref|ZP_05894818.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|261213426|ref|ZP_05927707.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|261218414|ref|ZP_05932695.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261221617|ref|ZP_05935898.1| polyprenyl synthetase [Brucella ceti B1/94] gi|261315356|ref|ZP_05954553.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261317077|ref|ZP_05956274.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261320737|ref|ZP_05959934.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261324532|ref|ZP_05963729.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261757634|ref|ZP_06001343.1| polyprenyl synthetase [Brucella sp. F5/99] gi|265983557|ref|ZP_06096292.1| polyprenyl synthetase [Brucella sp. 83/13] gi|265988115|ref|ZP_06100672.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|265990531|ref|ZP_06103088.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265994359|ref|ZP_06106916.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|265997580|ref|ZP_06110137.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|265999601|ref|ZP_05467084.2| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|297247801|ref|ZP_06931519.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196] gi|82615416|emb|CAJ10385.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308] gi|225640302|gb|ACO00216.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|255999015|gb|ACU47414.1| polyprenyl synthetase family protein [Brucella microti CCM 4915] gi|260097267|gb|EEW81142.1| polyprenyl synthetase [Brucella abortus NCTC 8038] gi|260153494|gb|EEW88586.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M] gi|260667717|gb|EEX54657.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292] gi|260671655|gb|EEX58476.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260674287|gb|EEX61108.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870] gi|260872732|gb|EEX79801.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68] gi|260915033|gb|EEX81894.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya] gi|260920201|gb|EEX86854.1| polyprenyl synthetase [Brucella ceti B1/94] gi|260923503|gb|EEX90071.1| polyprenyl synthetase [Brucella ceti M13/05/1] gi|261293427|gb|EEX96923.1| polyprenyl synthetase [Brucella ceti M644/93/1] gi|261296300|gb|EEX99796.1| polyprenyl synthetase [Brucella pinnipedialis B2/94] gi|261300512|gb|EEY04009.1| polyprenyl synthetase [Brucella neotomae 5K33] gi|261304382|gb|EEY07879.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10] gi|261737618|gb|EEY25614.1| polyprenyl synthetase [Brucella sp. F5/99] gi|262552048|gb|EEZ08038.1| polyprenyl synthetase [Brucella ceti M490/95/1] gi|262765472|gb|EEZ11261.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether] gi|263001315|gb|EEZ13890.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263094886|gb|EEZ18624.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9] gi|264660312|gb|EEZ30573.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1] gi|264662149|gb|EEZ32410.1| polyprenyl synthetase [Brucella sp. 83/13] gi|297174970|gb|EFH34317.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196] Length = 340 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 59 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230 Query: 229 DC---EEDLPK 236 D DL K Sbjct: 231 DYGGSAADLGK 241 >gi|91200422|emb|CAJ73469.1| similar to octaprenyl diphosphate synthase [Candidatus Kuenenia stuttgartiensis] Length = 323 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 8/219 (3%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75 I+ ++D++ + +Q Q+N + + GK++R L + + + Sbjct: 10 IEPLMDEVEARFYKELQPQNNSLADLVVHISKYKGKRLRPALTLLSGKCISDTAPQHIDL 69 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 +E +H +L+HDD+ +D +RR +++ ++ +I+ G+ L + F I+S+ Sbjct: 70 AVVVEMVHTATLVHDDI--IDEAAMRRHVESMNSKWGREISILFGDYLFSRGFTILSALD 127 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195 +Q+ + SQ + ++ + Q+ D + E I + KT +L +C Sbjct: 128 SQIATLLLSQTVNTMCEGELI------QLKRRYDVGLSEEDYIDIIEKKTASLCATSCRL 181 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 GA A A+ E + +G +G FQ+ DD LD D Sbjct: 182 GATFAGANHKLSEMMSNYGLKIGTAFQIIDDCLDFMGDE 220 >gi|123968209|ref|YP_001009067.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. AS9601] gi|123198319|gb|ABM69960.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. AS9601] Length = 323 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 11/227 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + E + ++ LDDL+L+ + + H +A GGK++R +V + + Sbjct: 4 VTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPE 63 Query: 69 ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L Sbjct: 64 FCLTTKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 A +++ + S++++ L Q L+ D ++ KT Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEI------KQNLNRFDSAQSFSKYINKSYCKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +L+ +C++ +++ + L FG+N+G+ FQ+ DD+LD Sbjct: 176 ASLIANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILDFTG 222 >gi|78779003|ref|YP_397115.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9312] gi|78712502|gb|ABB49679.1| Trans-hexaprenyltranstransferase [Prochlorococcus marinus str. MIT 9312] Length = 323 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 11/227 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + E + ++ LDDL+ + + + H +A GGK++R +V + + Sbjct: 4 VTELLQPVENDLDDLIFELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISSE 63 Query: 69 ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L Sbjct: 64 FCLTNKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 A +++ + S++++ L Q L+ D ++ KT Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEI------KQNLNRFDSAQSFSKYINKSYCKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +L+ +C++ +++ S + L FG+N+G+ FQ+ DD+LD Sbjct: 176 ASLIANSCKAAGVLSDLSDEKLNSLYDFGKNIGLAFQVVDDILDFTG 222 >gi|319408199|emb|CBI81852.1| octaprenyl-diphosphate synthase [Bartonella schoenbuchensis R1] Length = 338 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 15/223 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 ++N +R++ ++ ++ Q M + + L+S+ GGK++R + A +F Sbjct: 25 KDNMERVNQLIISMV-QADVEMIPEICNYLISS------GGKRLRPMITLAAADMFGYQG 77 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +++ AIE +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF+ Sbjct: 78 DGHIKLATAIEFMHTATLLHDDV--VDESNLRRGKSTARMIWGNKASVLVGDFLLGQAFK 135 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 +I + + + +L+ I +G + Q+ Q+ + I KT AL Sbjct: 136 MIVDVGS-----MEALTILANAAAIIAEGEVM-QLAAAQNIETTASDYLKIINAKTAALF 189 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 A E G I+A E+ LR +G +LG+ FQL DD LD Sbjct: 190 SAAAEVGPIIAGYGHEERLALREYGTSLGLAFQLVDDALDYSG 232 >gi|86149392|ref|ZP_01067623.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6] gi|86153173|ref|ZP_01071378.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596676|ref|ZP_01099913.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25] gi|148925783|ref|ZP_01809471.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486] gi|218563233|ref|YP_002345013.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840174|gb|EAQ57432.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85844058|gb|EAQ61268.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni HB93-13] gi|88191517|gb|EAQ95489.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25] gi|112360940|emb|CAL35741.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845793|gb|EDK22884.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486] gi|284926838|gb|ADC29190.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni IA3902] gi|315927606|gb|EFV06937.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929482|gb|EFV08678.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni 305] Length = 281 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%) Query: 48 LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 95 LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152 Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ Sbjct: 153 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212 Query: 225 DDLLDCE 231 DD++D Sbjct: 213 DDIIDVT 219 >gi|296134998|ref|YP_003642240.1| Polyprenyl synthetase [Thiomonas intermedia K12] gi|295795120|gb|ADG29910.1| Polyprenyl synthetase [Thiomonas intermedia K12] Length = 326 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 20/238 (8%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61 + + + E+ + +D + L + + T Y + GG K++R L+ Sbjct: 8 HSVFAPITEDMESVDRAIHTHLASEVALINTIGG--------YIVAGGGKRLRPALLLLV 59 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ Sbjct: 60 SQALGFRGPQQHIMAAVVELIHTATLLHDDV--VDESSMRRGRETSNALFGNSASVLVGD 117 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L + AF+++ S + +R +L+ N+ +G + Q+L++ D +DE + + Sbjct: 118 FLYSRAFQMMVSVGS-----MRILNILADATNVIAEGEVL-QLLNMHDPEVDEQRYLQVI 171 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 + KT L A GA++A A N +E + G + G FQL DDLLD +L K Sbjct: 172 RFKTAKLFEAAARIGAVLADADANTQEEMALAGRSFGTAFQLIDDLLDYSGNSAELGK 229 >gi|163842683|ref|YP_001627087.1| hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445] gi|163673406|gb|ABY37517.1| Hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445] Length = 340 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 59 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230 Query: 229 DC---EEDLPK 236 D DL K Sbjct: 231 DYGGSAADLGK 241 >gi|110597409|ref|ZP_01385696.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM 13031] gi|110340953|gb|EAT59424.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM 13031] Length = 324 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 10/229 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67 +++ + ++ + ++ Q + N + RY L GK+IR LV A L Sbjct: 3 IKDVTASVNDEI-EIFQQRYKTVLYAQNTLVDKVTRYVLKQQGKQIRPALVLLSAQLCGG 61 Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 + ++ R +E +H +LIHDD+ +D +RRG +++ + +++ G+ LL+ Sbjct: 62 VNESSYRAAIMVELLHSATLIHDDV--VDGAEMRRGLASINALWKNKISVLIGDYLLSRG 119 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187 K ++ S+ + ++ L Q+ + I E + KT + Sbjct: 120 LLYSLEHKDYGFLHMVSEAVRRMSEGEIL------QIQKTRSLDISEEDYLSVISDKTAS 173 Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L+ AC GA+ + ++ L+ +GE LG+ FQ+ DDLLD D K Sbjct: 174 LISSACAMGAMSSTTDESAIASLKSYGEYLGLAFQIRDDLLDYTGDSKK 222 >gi|261751747|ref|ZP_05995456.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] gi|261741500|gb|EEY29426.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513] Length = 340 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 59 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230 Query: 229 DC---EEDLPK 236 D DL K Sbjct: 231 DYGGSAADLGK 241 >gi|157413035|ref|YP_001483901.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9215] gi|157387610|gb|ABV50315.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds) [Prochlorococcus marinus str. MIT 9215] Length = 323 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 11/227 (4%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68 + E + ++ LDDL+L+ + + H +A GGK++R +V + + Sbjct: 4 VTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPE 63 Query: 69 ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 R+ E IH SL+HDD+ +D RRG TVH +++ A++AG+ L Sbjct: 64 FCLTSKHKRLAEITEMIHTASLVHDDV--VDEAATRRGVDTVHSRFNTRVAVLAGDFLFA 121 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 A +++ + S++++ L Q L+ D ++ KT Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEI------KQNLNRFDSAQSFSKYINKSYCKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +L+ +C++ +++ + L FG+N+G+ FQ+ DD+LD Sbjct: 176 ASLIANSCKAAGVLSGINDENLTSLYEFGKNIGLAFQVVDDILDFTG 222 >gi|75907691|ref|YP_321987.1| polyprenyl synthetase [Anabaena variabilis ATCC 29413] gi|75701416|gb|ABA21092.1| Polyprenyl synthetase [Anabaena variabilis ATCC 29413] Length = 323 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 13/221 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71 ++ L +L + + L +A + GGK+IR +V + + Sbjct: 11 VEADL-RILADNLKQLVGNRHPILFAAAEHLFGAGGKRIRPAIVLLISRATMLEQDITPR 69 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 R+ E IH SL+HDD+ +D +RRG PTVH + AI+AG+ L + + Sbjct: 70 HRRLAEITEMIHTASLVHDDV--VDESEVRRGVPTVHSLFGNRIAILAGDFLFAQSSWYL 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 ++ + S++++ L Q L+ D I KT +L+ Sbjct: 128 ANLDNLQVVKLLSEVIMDLATGEI------QQGLNRFDASISIENYIEKSYYKTASLIAN 181 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + ++ +++ S E L +G +LGI FQ+ DD+LD Sbjct: 182 SSKAAGLLSEVSPETAEHLYAYGRHLGIAFQIVDDILDFTS 222 >gi|15901068|ref|NP_345672.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4] gi|111657819|ref|ZP_01408536.1| hypothetical protein SpneT_02001001 [Streptococcus pneumoniae TIGR4] gi|148998635|ref|ZP_01826074.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70] gi|168577215|ref|ZP_02723024.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae MLV-016] gi|182684065|ref|YP_001835812.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14] gi|225860956|ref|YP_002742465.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae Taiwan19F-14] gi|298230892|ref|ZP_06964573.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254303|ref|ZP_06977889.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502796|ref|YP_003724736.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A] gi|303254296|ref|ZP_07340405.1| geranyltranstransferase [Streptococcus pneumoniae BS455] gi|303258839|ref|ZP_07344818.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293] gi|303261523|ref|ZP_07347470.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292] gi|303264193|ref|ZP_07350113.1| geranyltranstransferase [Streptococcus pneumoniae BS397] gi|303266176|ref|ZP_07352069.1| geranyltranstransferase [Streptococcus pneumoniae BS457] gi|303268097|ref|ZP_07353897.1| geranyltranstransferase [Streptococcus pneumoniae BS458] gi|307067855|ref|YP_003876821.1| geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae AP200] gi|14972686|gb|AAK75312.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4] gi|147755472|gb|EDK62520.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70] gi|182629399|gb|ACB90347.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14] gi|183577213|gb|EDT97741.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae MLV-016] gi|225727927|gb|ACO23778.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase) [Streptococcus pneumoniae Taiwan19F-14] gi|298238391|gb|ADI69522.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A] gi|301801934|emb|CBW34659.1| putative geranyltranstransferase [Streptococcus pneumoniae INV200] gi|302598790|gb|EFL65827.1| geranyltranstransferase [Streptococcus pneumoniae BS455] gi|302637103|gb|EFL67591.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292] gi|302639782|gb|EFL70238.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293] gi|302642314|gb|EFL72661.1| geranyltranstransferase [Streptococcus pneumoniae BS458] gi|302644346|gb|EFL74600.1| geranyltranstransferase [Streptococcus pneumoniae BS457] gi|302646005|gb|EFL76232.1| geranyltranstransferase [Streptococcus pneumoniae BS397] gi|306409392|gb|ADM84819.1| Geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae AP200] gi|327389445|gb|EGE87790.1| polyprenyl synthetase family protein [Streptococcus pneumoniae GA04375] Length = 291 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 15/234 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57 Query: 69 HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127 A V A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L + Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDS 117 Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185 + +I+ L I+ L+ +L+ G GM+ GQ+LD++ E + ++ I KT Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 G L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD E++ K Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229 >gi|254780755|ref|YP_003065168.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040432|gb|ACT57228.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 322 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 9/199 (4%) Query: 37 DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95 + + ++Y + GGK++R L A + + + AIE IH +L+HDD+ + Sbjct: 28 EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85 Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155 D+ +RRGK + + T+++ G+ LL+ AF ++ K+Q S + +L Sbjct: 86 DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE- 144 Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215 Q+ ++ + E + K KT L A E +++A + ++ L+ +G Sbjct: 145 -----LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199 Query: 216 NLGIIFQLADDLLDCEEDL 234 NLGI FQL DD+LD ++ Sbjct: 200 NLGIAFQLVDDVLDYRGEV 218 >gi|55377016|ref|YP_134866.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC 43049] gi|55229741|gb|AAV45160.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC 43049] Length = 346 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%) Query: 9 LQENSKRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63 + E ++++ + D + + Q D L A RY L GGK++R ++ A Sbjct: 1 MSERHQQVEDAIVARRDRVNDALPEDLPVQKPDHLYEASRYLLDAGGKRLRPTVLLLVAE 60 Query: 64 -LFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 L +V+ LTA + AIE I ++LIHDD+ MD+ +RRG P V Sbjct: 61 SLLDVDPLTADYRDFPTLEGGQADMMSAALAIEVIQTFTLIHDDI--MDDDALRRGVPAV 118 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 H +YD TAI+AG+ L + AFE + + + + L+ T + GQ LDI Sbjct: 119 HKEYDLSTAILAGDTLYSKAFEFLLETGAAHERTVDANKRLATT----CTRICEGQSLDI 174 Query: 168 QDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 + E D + + ++KT L A A + A + + L +G ++G FQ+ Sbjct: 175 EFEQRDVVTPEEYLEMVELKTAVLYGAAASIPATLLGADEQTVDALYNYGLDVGRAFQIQ 234 Query: 225 DDLLDCE---EDLPK 236 DDLLD E L K Sbjct: 235 DDLLDLTTPSEKLGK 249 >gi|17987815|ref|NP_540449.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] gi|17983542|gb|AAL52713.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella melitensis bv. 1 str. 16M] Length = 362 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 81 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 138 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 139 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 192 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 193 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 252 Query: 229 DC---EEDLPK 236 D DL K Sbjct: 253 DYGGSAADLGK 263 >gi|301169600|emb|CBW29201.1| octaprenyl diphosphate synthase [Haemophilus influenzae 10810] Length = 329 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ ++ ++ +++ N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220 Query: 229 DCEE 232 D Sbjct: 221 DYSA 224 >gi|294851781|ref|ZP_06792454.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026] gi|294820370|gb|EFG37369.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026] Length = 340 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 59 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230 Query: 229 DC---EEDLPK 236 D DL K Sbjct: 231 DYGGSAADLGK 241 >gi|209522097|ref|ZP_03270748.1| Polyprenyl synthetase [Burkholderia sp. H160] gi|209497469|gb|EDZ97673.1| Polyprenyl synthetase [Burkholderia sp. H160] Length = 330 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 109/230 (47%), Gaps = 15/230 (6%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62 L + + E+ ++++ ++ L + Q ++ ++SA GGK++R L+ A Sbjct: 12 ASLLAPISEDMQQVNRVIRQRLASDVM-LINQISEYIISA------GGKRLRPALLLLVA 64 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ Sbjct: 65 GALGDTTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182 L + +F+++ +R +L+ NI +G + Q+L++ D +DE + + + Sbjct: 123 LYSRSFQMMVGVG-----KMRVMEILAEATNIISEGEVL-QLLNMHDADVDEARYMQVIR 176 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L A + GA++A A + +G +G FQ+ DD LD Sbjct: 177 YKTAKLFEAAAQLGAVLAGADTKTEAAAAEYGRRIGTAFQIMDDWLDYTG 226 >gi|145629957|ref|ZP_01785739.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021] gi|145634043|ref|ZP_01789754.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA] gi|145636989|ref|ZP_01792653.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittHH] gi|145641936|ref|ZP_01797510.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae R3021] gi|148828062|ref|YP_001292815.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG] gi|229844760|ref|ZP_04464899.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1] gi|144984238|gb|EDJ91661.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021] gi|145268487|gb|EDK08480.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA] gi|145269847|gb|EDK09786.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae PittHH] gi|145273415|gb|EDK13287.1| DNA-binding response regulator in two-component regulatory system with ArcB or CpxA [Haemophilus influenzae 22.4-21] gi|148719304|gb|ABR00432.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG] gi|229812474|gb|EEP48164.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1] Length = 323 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ ++ ++ +++ N+ +G + Q++++ Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 155 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 214 Query: 229 DCEE 232 D Sbjct: 215 DYSA 218 >gi|327396572|dbj|BAK13993.1| geranylgeranyl pyrophosphate synthetase CrtE [Pantoea ananatis AJ13355] Length = 302 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66 ++ ID LD LL D + +A+R AL GK+IR L+ A Sbjct: 17 EQLLADIDRRLDQLLPVEGER------DVVGAAMREGALAPGKRIRPMLLLLTARDLGCA 70 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 V+H L + A+E +H SLI DD+P MD+ +RRG+PT+H Y E AI+A LL+ Sbjct: 71 VSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSK 130 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184 AF +I+ L +++ + L++ IG+QG++ GQ D D+ + M K Sbjct: 131 AFGVIADAD-GLTPLAKNRAVSELSNAIGMQGLVQGQFKDLSEGDKPRSAEAILMTNHFK 189 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 T L C + + +I+A+AS ++ L F +LG FQL DDL D D K Sbjct: 190 TSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAFQLLDDLTDGMTDTGK 241 >gi|293366563|ref|ZP_06613240.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|291319332|gb|EFE59701.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis M23864:W2(grey)] Length = 332 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 17/225 (7%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLT 71 K+++ L++ ++ + +Q L S GGK++R V N Sbjct: 24 KKVEKRLEEAIISSDQTLQEASFHLLSS-------GGKRVRPAFVILSGQFGSNNKPSED 76 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 RV A+E IH +L+HDD+ +D RRG+ T+ ++D+ TAI+ GN LL + + Sbjct: 77 TYRVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHL 134 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 S + S+ ++ + Q D + T KT L+ Sbjct: 135 SEISDTRVHSTISKSIVDVCRGE------LFQFQDQFNSNQTITNYLRRINRKTALLIQL 188 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + GAI ++AS + +L+ G +G+ FQ+ DD+LD K Sbjct: 189 STQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 233 >gi|57866983|ref|YP_188615.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A] gi|282876098|ref|ZP_06284965.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis SK135] gi|57637641|gb|AAW54429.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A] gi|281295123|gb|EFA87650.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis SK135] gi|329725457|gb|EGG61940.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis VCU144] gi|329735239|gb|EGG71531.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis VCU045] gi|329737300|gb|EGG73554.1| putative heptaprenyl diphosphate synthase component II [Staphylococcus epidermidis VCU028] Length = 319 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 17/225 (7%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLT 71 K+++ L++ ++ + +Q L S GGK++R V N Sbjct: 11 KKVEKRLEEAIISSDQTLQEASFHLLSS-------GGKRVRPAFVILSGQFGSNNKPSED 63 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 RV A+E IH +L+HDD+ +D RRG+ T+ ++D+ TAI+ GN LL + + Sbjct: 64 TYRVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHL 121 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 S + S+ ++ + Q D + T KT L+ Sbjct: 122 SEISDTRVHSTISKSIVDVCRGE------LFQFQDQFNSNQTITNYLRRINRKTALLIQL 175 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + GAI ++AS + +L+ G +G+ FQ+ DD+LD K Sbjct: 176 STQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 220 >gi|27468075|ref|NP_764712.1| heptaprenyl diphosphate syntase component II [Staphylococcus epidermidis ATCC 12228] gi|27315620|gb|AAO04754.1|AE016747_251 heptaprenyl diphosphate syntase component II [Staphylococcus epidermidis ATCC 12228] Length = 339 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 17/225 (7%) Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLT 71 K+++ L++ ++ + +Q L S GGK++R V N Sbjct: 31 KKVEKRLEEAIISSDQTLQEASFHLLSS-------GGKRVRPAFVILSGQFGSNNKPSED 83 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 RV A+E IH +L+HDD+ +D RRG+ T+ ++D+ TAI+ GN LL + + Sbjct: 84 TYRVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHL 141 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 S + S+ ++ + Q D + T KT L+ Sbjct: 142 SEISDTRVHSTISKSIVDVCRGE------LFQFQDQFNSNQTITNYLRRINRKTALLIQL 195 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + + GAI ++AS + +L+ G +G+ FQ+ DD+LD K Sbjct: 196 STQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 240 >gi|169827495|ref|YP_001697653.1| heptaprenyl diphosphate synthase component II [Lysinibacillus sphaericus C3-41] gi|168991983|gb|ACA39523.1| Heptaprenyl diphosphate synthase component II [Lysinibacillus sphaericus C3-41] Length = 324 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 18/235 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L S L+ + I+ L++ + ++S++ + LL A GGK+IR V A Sbjct: 9 LYSDLKSDIDIIERELENAV-DSSSYLINDASLHLLQA------GGKRIRPIFVLLGAKF 61 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + V +E IH SL+HDD+ +D+ +RRG+PTV Q++ A+ G+ + Sbjct: 62 GEYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVKAQWNNRVAMYTGDFIF 119 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 A E I+ + L I ++ M+ + + + Q+ D F K K Sbjct: 120 ARALEYITKLEDPLVHQILARTMVEICNGEVI------QIEDKFRLDQGLKDYFRRIKRK 173 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 T L+ +CE GA+ A L+ FG +G+ FQ+ DD+LD +L K Sbjct: 174 TALLISSSCELGAVAAGVDAKTVRHLKRFGYFVGMSFQIIDDVLDIMATDKELGK 228 >gi|316932581|ref|YP_004107563.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1] gi|315600295|gb|ADU42830.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1] Length = 336 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 8/188 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L +++ AA+E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAMANLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +R+ +LS +G + Q+ + Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSSASATIAEGEVM-QLAAAK 166 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + + KT L ACE G +A+ + E+ R FG N+GI FQL DD+L Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPAIANRPKPEQSACRSFGMNIGIAFQLIDDVL 226 Query: 229 DCEEDLPK 236 D K Sbjct: 227 DYGGKAAK 234 >gi|145632254|ref|ZP_01787989.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655] gi|144987161|gb|EDJ93691.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655] Length = 323 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 95/184 (51%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ ++ ++ +++ N+ +G + Q++++ Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D ET + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 155 DPETSETNYMRVIYSKTARLFEVAGQAAAIVAGGTEVQEKALQDYGRYLGTAFQLVDDVL 214 Query: 229 DCEE 232 D Sbjct: 215 DYSA 218 >gi|68249468|ref|YP_248580.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP] gi|329122893|ref|ZP_08251464.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116] gi|68057667|gb|AAX87920.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP] gi|327471824|gb|EGF17264.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116] Length = 329 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ ++ ++ +++ N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220 Query: 229 DCEE 232 D Sbjct: 221 DYSA 224 >gi|260460355|ref|ZP_05808607.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] gi|259034000|gb|EEW35259.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075] Length = 338 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A +F + +++ A+E +H +L+HDD+ +D +RRGK T Sbjct: 57 GGKRLRPMLTLAAAQMFGYSGEGHVKLATAVEFMHTATLLHDDV--VDESGMRRGKKTAR 114 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + + + +LS +I +G + Q+ + Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGS-----LEALDILSSAASIIAEGEVM-QLAAAK 168 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + F + K KT AL A E G ++A A++N++ LR +G NLG+ FQL DD L Sbjct: 169 NLETTEDEHFAVIKAKTAALFSAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDAL 228 Query: 229 DCEE---DLPK 236 D DL K Sbjct: 229 DYGGTSKDLGK 239 >gi|319775186|ref|YP_004137674.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047] gi|317449777|emb|CBY85984.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047] Length = 329 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A ++ +E IH SL+HDD+ +D +RRG+ T + Sbjct: 49 GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 ++ +++ G+ + T AF++++ ++ ++ +++ N+ +G + Q++++ Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 160 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+L Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220 Query: 229 DCEE 232 D Sbjct: 221 DYSA 224 >gi|302795999|ref|XP_002979762.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii] gi|300152522|gb|EFJ19164.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii] Length = 415 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 25/246 (10%) Query: 4 GLPSKLQENSKR----IDTILD------DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKK 52 G+ S +Q +R ++ I++ D L Q + N L+SA GGK+ Sbjct: 77 GVASYVQRRERREKLSLNEIIEPVSSDLDALNQNLQSIVGVQNPLLMSAAEQIFGAGGKR 136 Query: 53 IRSFLVTECASL------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 +R +V + N HL R+ E IH SLIHDD+ +D +RRGK T Sbjct: 137 MRPAIVFLVSRATMQLARLNTIHLQHRRLAEITEMIHTASLIHDDV--LDESDVRRGKET 194 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 VH Y A++AG+ + + +++ + SQ++ Q Sbjct: 195 VHQLYGTRIAVLAGDFMFAQSSWYLANLDNLEVIKLISQVIKDFASGEI------QQASS 248 Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226 + D I KT +L+ + S AI + A + +++ +G+ LG+ FQ+ DD Sbjct: 249 LFDSDITLDNYLDKSYYKTASLIAASTRSAAIFSGADPSVCDKMFDYGKYLGLAFQIVDD 308 Query: 227 LLDCEE 232 +LD + Sbjct: 309 ILDFTQ 314 >gi|121613596|ref|YP_001001287.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176] gi|167006181|ref|ZP_02271939.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176] gi|87249601|gb|EAQ72560.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176] Length = 281 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%) Query: 48 LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 95 LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152 Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ Sbjct: 153 CFFEDKKLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212 Query: 225 DDLLDCE 231 DD++D Sbjct: 213 DDIIDVT 219 >gi|312795723|ref|YP_004028645.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl pyrophosphate synthetase [Burkholderia rhizoxinica HKI 454] gi|312167498|emb|CBW74501.1| Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) [Burkholderia rhizoxinica HKI 454] Length = 298 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 79/236 (33%), Positives = 120/236 (50%), Gaps = 11/236 (4%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62 +++ R + L +L +L A+RYA+LGG K++R L Sbjct: 7 AFDEWVRDVLARTEVALSAVLPPAD-----VEPMQLHQAMRYAVLGGGKRVRPMLCHAAG 61 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 A+E IH YSL+HDDLPSMD+ +RRGKPTVH+QYDE T ++ G+ Sbjct: 62 QALGAPGQRLDAAACALELIHVYSLVHDDLPSMDDDDMRRGKPTVHVQYDEATGLLVGDA 121 Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180 L + AF ++S L+ + ++ LM L G GM GGQ +D+ + TQ+ + Sbjct: 122 LQSQAFIALASDA--LEAHRQAALMRELACASGSLGMAGGQAIDLASVGTRLSRTQLETM 179 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235 +MKTGAL+ A + GA+ + E L + + +G+ FQ+ DD+LD D Sbjct: 180 HRMKTGALLRAAVKMGALCGDGLSADIEAGLDAYAKAVGLAFQVVDDILDVTADSA 235 >gi|317504363|ref|ZP_07962347.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606] gi|315664485|gb|EFV04168.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606] Length = 325 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 12/226 (5%) Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA--IRYALLGGKKIRSFLVTECASLF 65 L + I LDD + + H++ LL+ + GGK++R L+ A F Sbjct: 3 YLSLIKQPISAELDDFISLFNQSLS--HDNGLLAQVLMHIRQRGGKRMRPILILLMAKNF 60 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 +E +H SL+HDD+ +D RRG+ +V+ YD +++ G+ +L+ Sbjct: 61 GCVSSVTQHAAVGLELLHTASLVHDDV--VDESSERRGQASVNALYDNKVSVLVGDFILS 118 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185 A +S +++ S+L +L+ L Q+ +IQ E I ET + I K KT Sbjct: 119 TALLYVSKTHSEVIVRRLSELGRTLSDGEIL------QLTNIQKEAISETAYYEIIKRKT 172 Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 AL GA A AS ++ E R FG+NLGIIFQ+ DD+ D Sbjct: 173 AALFESCAAIGAESAGASDDDVEAARLFGQNLGIIFQIRDDIFDYY 218 >gi|254995376|ref|ZP_05277566.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Mississippi] gi|255004689|ref|ZP_05279490.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str. Virginia] Length = 327 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 14/235 (5%) Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA---IRYALLGGKKIRSFL 57 M+ L + + L+DL + T ++D A L GGK+IR L Sbjct: 1 MSDAFNRALIDLKSLV---LEDLQAMEQLIVDTSNSDISYIADIVSHLMLSGGKRIRPIL 57 Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117 + + + +R+ AAIE IH +L+HDD+ +D +RRG T + + +I Sbjct: 58 LLAVCKMLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKTSNSLWGNKASI 115 Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177 + G+ LL AF+ I S N +LS + G + QM+ ++ I + Sbjct: 116 LVGDFLLAAAFQWIVSCG-----NFELLTVLSGASRTIVAGEI-QQMVYSKNLDITREKY 169 Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 I KT AL CES +++ + +E LR FG N GI FQ+ DDLLD Sbjct: 170 IEIISAKTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVDDLLDYTA 224 >gi|94312038|ref|YP_585248.1| polyprenyl synthetase [Cupriavidus metallidurans CH34] gi|93355890|gb|ABF09979.1| octaprenyl diphosphate synthase [Cupriavidus metallidurans CH34] Length = 325 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 109/229 (47%), Gaps = 15/229 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 L + + + + +D ++ L ++ Q + ++ A GGK++R ++ A Sbjct: 8 ALLAPVAADMRAVDAVIRRRLSSEVPLIE-QIGEYIIGA------GGKRLRPVILLLSAR 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 F+ + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L Sbjct: 61 AFDYEGHRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTANAVFGNAASVLVGDFL 118 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 + AF+++ + +R +LS N+ +G + Q+L++ D + + + + Sbjct: 119 YSRAFQMMVEAGS-----MRIMEILSNATNVIAEGEVL-QLLNMHDPEVTVERYLQVIRY 172 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L + + GA++A A +E +G +G FQL DD+LD Sbjct: 173 KTAKLFEASAQLGAVLAGADAEMEEAAAEYGRRIGTAFQLIDDMLDYTA 221 >gi|237814874|ref|ZP_04593872.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella abortus str. 2308 A] gi|237789711|gb|EEP63921.1| farnesyl pyrophosphate synthetase / geranyltranstransferase [Brucella abortus str. 2308 A] Length = 363 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R + A +F +R+ ++E +H +L+HDD+ +D +RRGK T Sbjct: 82 GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 139 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ LL AF+++ + + + +L+ + +I +G + Q+ + Sbjct: 140 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 193 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + K KT AL A E G I+A A ++++ LR +G NLG+ FQL DD L Sbjct: 194 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 253 Query: 229 DC---EEDLPK 236 D DL K Sbjct: 254 DYGGSAADLGK 264 >gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var. chinensis] Length = 207 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 7/167 (4%) Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136 A+E IH SLIHDDLP MDN RRGKPT H + E TA++AG+ LL++AFE I+ + Sbjct: 1 CAMEMIHTMSLIHDDLPRMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATS 60 Query: 137 QLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192 + + R+ ++S IG QG++GGQ++DI E +D + I KT L+ + Sbjct: 61 KTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECS 120 Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236 SG I+ A+++E R+R + +G++FQ+ DD+LD E+L K Sbjct: 121 VVSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDVTKSSEELGK 167 >gi|39934115|ref|NP_946391.1| farnesyltranstransferase [Rhodopseudomonas palustris CGA009] gi|192289642|ref|YP_001990247.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] gi|39647963|emb|CAE26483.1| octaprenyl-diphosphate synthase [Rhodopseudomonas palustris CGA009] gi|192283391|gb|ACE99771.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1] Length = 336 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 8/188 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A+L +++ AA+E +H +L+HDD+ +D +RRGK + Sbjct: 55 GGKRLRPMLTLAMANLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + + +++ G+ LL AF ++ + +R+ +LS +G + Q+ + Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSSASATIAEGEVM-QLAAAK 166 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 + E + + + KT L ACE G +A+ + E+ R FG N+GI FQL DD+L Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPAIANRPKPEQSACRSFGMNIGIAFQLIDDVL 226 Query: 229 DCEEDLPK 236 D K Sbjct: 227 DYGGKAAK 234 >gi|288563197|pdb|3LJI|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 gi|290560563|pdb|3LSN|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed With Magnesium Length = 304 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 76/242 (31%), Positives = 121/242 (50%), Gaps = 13/242 (5%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62 L + + R+D L + + RL A RY++ GGK++R L Sbjct: 2 SLTAYQASSQARVDAAXHTLFTAPSPELA-----RLYEAXRYSVXNGGKRVRPLLAYAAC 56 Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122 A A+E IH YSL+HDDLP+ D+ +RRG+PT H +DE AI+AG+G Sbjct: 57 EALGGKPEQANGAACAVELIHAYSLVHDDLPAXDDDDLRRGQPTTHKAFDEACAILAGDG 116 Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179 L + AF + P + IR + + +L G G +GGQ +D+ +D+ + Sbjct: 117 LQSLAFSALLDPALSDASAEIRLRXVTTLAQAAGPAGXVGGQAIDLGSVGLKLDQQALEY 176 Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235 + KTGAL+ + GA+ + A + E + L+ + + +G+ FQ+ DD+LD E D L Sbjct: 177 XHRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLG 236 Query: 236 KK 237 K+ Sbjct: 237 KR 238 >gi|163749221|ref|ZP_02156471.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99] gi|161331291|gb|EDQ02180.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99] Length = 323 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 11/191 (5%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK++R L A + + L++ A +E IH SL+HDD+ +D +RRG+ T + Sbjct: 43 GGKRMRPLLSILAARAIDYQGVAHLKLAAIVEFIHTASLLHDDV--VDESMLRRGRDTAN 100 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ L T +F++++ + ++ ML+ N+ +G + Q+++ Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELGS-----MKVLKMLADATNVLAEGEVL-QLMNCN 154 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A ++A + + L +G+ LG FQL DDLL Sbjct: 155 DPDTSEESYMRVIYCKTAKLFEAATRLAGVLADSPIEIQTALADYGKYLGTAFQLTDDLL 214 Query: 229 DC---EEDLPK 236 D E+L K Sbjct: 215 DYTANTEELGK 225 >gi|119356815|ref|YP_911459.1| trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM 266] gi|119354164|gb|ABL65035.1| Trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM 266] Length = 324 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 9/216 (4%) Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80 ++ + + N + RY L GK+IR LV A + + + R +E Sbjct: 15 EIFQERYKSVLHSKNTLVDKVTRYVLKQQGKQIRPALVLLSAKMCGGVNDSTYRSAIMVE 74 Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140 +H +LIHDD+ +D +RRG +++ + +++ G+ LL+ K Sbjct: 75 LLHSATLIHDDV--VDGAEMRRGLASINALWKNKISVLIGDYLLSKGLLYSLENKDYFSL 132 Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200 +I S+ + ++ L Q+ + I E + KT +L+ +C GA A Sbjct: 133 HIVSEAVRRMSEGEIL------QIQKTRSLDISEEDYLSVISDKTASLIASSCAMGAASA 186 Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 + +++ +GE LG+ FQ+ DDLLD D K Sbjct: 187 TEDEAAIAKMKNYGEYLGLAFQIRDDLLDYTGDSNK 222 >gi|42520637|ref|NP_966552.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410376|gb|AAS14486.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 328 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 10/218 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77 + ++D + + + + ++S GGKKIR LV + N + + V A Sbjct: 21 SAMNDFVFKNVNDEDAKLATDIIS--HLVRSGGKKIRPKLVFIICKMLNYSGENRINVAA 78 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 ++E IH +L+HDD+ +D R G T + + ++I+ G+ LLT AF + Sbjct: 79 SVEFIHNATLLHDDV--LDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLIECG-- 134 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 N+ +LS ++ ++G + QM D F I KT +L CE+ + Sbjct: 135 ---NLNILSILSKASHLLVKGEIK-QMTARFDPHTVRENYFDIIGEKTASLFSACCEAAS 190 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++ A+ +E ERL+ FG N G+ FQ+ DD+LD + Sbjct: 191 TVSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQG 228 >gi|86152300|ref|ZP_01070511.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94] gi|85840789|gb|EAQ58040.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94] Length = 281 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%) Query: 48 LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106 GGK R+ L+ L AL V A+E IH YSLIHDDLP+MDN RRG PT Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94 Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166 +H YDE TAI+ G+ L T AF ++S LKD I+ +L+ +L N GL GM+ GQ +D Sbjct: 95 LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152 Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224 +D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ Sbjct: 153 CFFEDKKLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212 Query: 225 DDLLDCE 231 DD++D Sbjct: 213 DDIIDVT 219 >gi|295696360|ref|YP_003589598.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912] gi|295411962|gb|ADG06454.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912] Length = 327 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62 L ++ +R++ +L++ + +Q A Y L GGK++R +V Sbjct: 5 ELYGAMRGELRRVEDLLEEEVASREPALQ--------EASLYLLRAGGKRLRPLVVLVSG 56 Query: 63 SLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 + +R AA+E IH +L+HDD+ +D RRG+PTV + + A+ G+ Sbjct: 57 RFGPRRDTEALVRAAAALEMIHMATLVHDDV--IDRSDTRRGRPTVKAAWGDQLALYTGD 114 Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181 L A E++S ++ R + + QG L QM D+ + + Sbjct: 115 FLFARALELLSEM-----EDRRLHEVTAWAIARMCQGELE-QMHDLYRIDQPLFRYYRRI 168 Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 + KT LM +C GA A A + L FG +LG+ FQ+ DD+LD D Sbjct: 169 RQKTALLMAVSCLVGARAAEADEETARALWRFGGHLGMAFQIVDDVLDLVGDEA 222 >gi|126653362|ref|ZP_01725466.1| HepT [Bacillus sp. B14905] gi|126589878|gb|EAZ84009.1| HepT [Bacillus sp. B14905] Length = 321 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 18/235 (7%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64 L S L+ + I+ L++ + ++S++ + LL A GGK+IR V A Sbjct: 6 LYSDLKSDIDIIERELENAV-DSSSYLINDASLHLLQA------GGKRIRPIFVLLGAKF 58 Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124 + V +E IH SL+HDD+ +D+ +RRG+PTV Q++ A+ G+ + Sbjct: 59 GEYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVKAQWNNRVAMYTGDFIF 116 Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184 A E I+ + L I ++ M+ + + + Q+ D F K K Sbjct: 117 ARALEYITKIEDPLVHQILARTMVEICNGEVI------QIEDKFRLDQGLKDYFRRIKRK 170 Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236 T L+ +CE GA+ A L+ FG +G+ FQ+ DD+LD +L K Sbjct: 171 TALLISSSCELGAVAAGVDAKTVRHLKRFGYFVGMSFQIIDDVLDIMATDKELGK 225 >gi|239907069|ref|YP_002953810.1| geranyltranstransferase [Desulfovibrio magneticus RS-1] gi|239796935|dbj|BAH75924.1| geranyltranstransferase [Desulfovibrio magneticus RS-1] Length = 299 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 124/235 (52%), Gaps = 6/235 (2%) Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63 + +L + ++ L + A + + LL+A+ Y+LL GGK++R L A Sbjct: 3 VKERLAVMAGEVEVYLRERF--GARMRERGVPENLLAAMEYSLLAGGKRLRPVLCLVFAE 60 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 LF+ + + A E IH YSLIHDDLP+MD+ +RRG+P+ H + E AI+AG+ L Sbjct: 61 LFDADRARVMPFAAGFEIIHTYSLIHDDLPAMDDDDLRRGRPSNHKVFGEAGAILAGDAL 120 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMI 180 LT AF + + + + G GM+GGQ+LD+ E + ++ + Sbjct: 121 LTEAFGCMGRVWPGVAAELVLPALAEAAKAAGAAGMVGGQVLDMDYTAREGVTLAELARM 180 Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 Q +KTGAL+ +C GAI+A A + R R +GE +G FQ+ DD+LD D Sbjct: 181 QALKTGALLTASCVCGAILAGAGEEGVARAREYGEAVGAAFQIVDDILDEIGDAA 235 >gi|58696807|ref|ZP_00372336.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Drosophila simulans] gi|225630516|ref|YP_002727307.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi] gi|58536990|gb|EAL60142.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Drosophila simulans] gi|225592497|gb|ACN95516.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi] Length = 325 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 10/218 (4%) Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77 + ++D + + + + ++S GGKKIR LV + N + + V A Sbjct: 18 SAMNDFVFKNVNDEDAKLATDIIS--HLVRSGGKKIRPKLVFIICKMLNYSGENRINVAA 75 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 ++E IH +L+HDD+ +D R G T + + ++I+ G+ LLT AF + Sbjct: 76 SVEFIHNATLLHDDV--LDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLIECG-- 131 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 N+ +LS ++ ++G + QM D F I KT +L CE+ + Sbjct: 132 ---NLNILSILSKASHLLVKGEIK-QMTARFDPHTVRENYFDIIGEKTASLFSACCEAAS 187 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 ++ A+ +E ERL+ FG N G+ FQ+ DD+LD + Sbjct: 188 TVSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQG 225 >gi|302038674|ref|YP_003798996.1| polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii] gi|300606738|emb|CBK43071.1| Polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii] Length = 334 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 15/223 (6%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69 +E + ++ + L + + + T L S GGK++R V A L Sbjct: 21 REELEGVEEQIRKNLDSSVALVNTVAAHILNS-------GGKRVRPLFVLLSAHLCGYAG 73 Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129 +G+ +E IH +L+HDD+ +D +RRG+ T + +I+ G+ L + A Sbjct: 74 QDHQALGSLVEFIHTATLLHDDV--VDEADLRRGRRTASKVWGNQISILVGDYLYSRAIC 131 Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189 I + Q + S+ + L Q+ + + E++ I + KT L+ Sbjct: 132 QIVDFRNQGINEALSEACRKMAEGEVL------QLYYNGNPLMPESEYLRIIEHKTAGLI 185 Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 +C+ GAI+ A++ +E L FG+ LGI FQLADD LD Sbjct: 186 AASCKIGAIVGGATEELQEALFRFGQRLGIAFQLADDTLDYTA 228 >gi|260220330|emb|CBA27759.1| hypothetical protein Csp_A03890 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 524 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 8/186 (4%) Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107 GGK++R L+ C + A +E IH +L+HDD+ +D+ +RRG PT Sbjct: 47 AGGKRLRPALLLLCCGALGYKGEQRFNMAAVVEFIHTATLLHDDV--VDDSDLRRGAPTA 104 Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167 + ++ +++ G+ L + AF+++ ++ +R +L+ NI +G + Q++++ Sbjct: 105 NARFGNPASVLVGDFLYSRAFQMMVDAQS-----MRIMQVLADATNIISEGEVM-QLMNM 158 Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227 + +DE + + KT L + GAI++ AS+ +E FG+ +G FQ+ DD+ Sbjct: 159 HNAALDEAGYLQVIRSKTAKLFEASARVGAILSQASETHEEACAEFGQAMGTAFQVIDDV 218 Query: 228 LDCEED 233 LD D Sbjct: 219 LDYAGD 224 >gi|257465194|ref|ZP_05629565.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202] gi|257450854|gb|EEV24897.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202] Length = 327 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 8/184 (4%) Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108 GGK+IR + A + A IE +H +L+HDD+ +D +RRG+ T + Sbjct: 47 GGKRIRPLITVLAARALGYQGAKQITTAAFIEFVHTATLLHDDV--VDESDMRRGRETAN 104 Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168 + +++ G+ + T +F++++S D++ ++S N +G + Q++++ Sbjct: 105 AAFGNAASVLVGDYIYTRSFQMMTS-----VDSLEVLKVMSAATNALAEGEV-QQLMNVN 158 Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228 D E + KT L A + AI+A+AS+ + L+ +G LG FQL DD+L Sbjct: 159 DPNTTEENYMRVIYNKTARLFEAATQCVAIVANASKEIEIALKNYGCYLGTAFQLVDDIL 218 Query: 229 DCEE 232 D Sbjct: 219 DYSA 222 >gi|217069938|gb|ACJ83329.1| unknown [Medicago truncatula] Length = 214 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 8/140 (5%) Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61 S + E + R++ LDD + + ++ A+RY+LL GGK++R L Sbjct: 79 FNFKSYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAA 131 Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121 L A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ Sbjct: 132 CELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 191 Query: 122 GLLTYAFEIISSPKTQLKDN 141 LL +AFE I+ + Sbjct: 192 ALLAFAFEHIAVSTVDVSPR 211 >gi|300727537|ref|ZP_07060928.1| polyprenyl synthetase [Prevotella bryantii B14] gi|299775240|gb|EFI71841.1| polyprenyl synthetase [Prevotella bryantii B14] Length = 325 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 12/214 (5%) Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGA 77 LDD + + H D LLS + + GK++R L+ A F +L Sbjct: 15 LDDFVALFNQSLS--HTDGLLSQVLDHIKQRAGKRMRPMLILLMAKNFGKVSDVSLNAAV 72 Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137 +E +H SL+HDD+ +D RRG+ +V+ Y+ A++ G+ LL+ A +S ++ Sbjct: 73 GLELLHTASLVHDDV--VDESDERRGQASVNASYNNKVAVLVGDYLLSTALLYVSYTHSE 130 Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197 + S+L +L++ L Q+ +IQ+ I E + + MKT AL GA Sbjct: 131 VIVRYLSELGRTLSNGEIL------QLSNIQNRTISEDAYYDVISMKTAALFEACAVIGA 184 Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231 A AS + R FG+ LG+IFQ+ DD+ D Sbjct: 185 ESAGASHEDTMAAREFGKKLGLIFQIRDDIFDYY 218 >gi|167465350|ref|ZP_02330439.1| heptaprenyl diphosphate synthase component II (spore germination protein C3) [Paenibacillus larvae subsp. larvae BRL-230010] Length = 253 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 15/229 (6%) Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63 + S+ +++ I+ L+ + ++ +++ Y GGK+IR V Sbjct: 5 DIYSRKKKDIAFIEKSLERSIDVDLPTLRD-------ASLLYLKAGGKRIRPVFVLLAGE 57 Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123 + + + +E IH SL+HDD+ +D+ RRGK TV ++D A+ G+ + Sbjct: 58 FGHYDLERMKHIAVPLELIHMASLVHDDV--IDDAETRRGKATVRSKWDNRIAMYTGDYV 115 Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183 A +++ K I S+ M+ ++ Q+ + K Sbjct: 116 YAKALTLVTELKNPAIHQIMSKAMIEMSIGE------MEQIRLFFEHGQTLRDYLRRIKR 169 Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 KT L+ +C+ GA+ A AS+N +RL FG +G+ FQ+ DD+LD Sbjct: 170 KTALLIAVSCQLGAMTAEASENYAKRLFHFGYYVGMAFQIRDDILDLVG 218 >gi|77361572|ref|YP_341147.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas haloplanktis TAC125] gi|76876483|emb|CAI87705.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase) [Pseudoalteromonas haloplanktis TAC125] Length = 323 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 12/227 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFN 66 ++ I+ ++D+ H Q + + L++ + Y + GGK++R L A Sbjct: 3 IKAIQALIENDMNDV--NQLIHAQMRSDVALVNQLGLYIVNSGGKRVRPMLAILAARALG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + +E IH +L+HDD+ +D +RRG PT + ++ +++ G+ + T Sbjct: 61 YQGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTANAEFGNAASVLVGDFIYTR 118 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 +F+++ ++ +L+ NI +G + Q+++ D E + KT Sbjct: 119 SFQLMVGLG-----KMQVMQVLADATNIIAEGEVL-QLMNCNDPDTTEASYMQVIYSKTA 172 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 L A AI+ +Q + L +G +LG FQL DD+LD D Sbjct: 173 KLFEAATGLAAIITEQNQATLDALNLYGMHLGTAFQLVDDVLDYNAD 219 >gi|256811061|ref|YP_003128430.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86] gi|256794261|gb|ACV24930.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86] Length = 317 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 19/230 (8%) Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68 + ++ID L + + +D+L +A ++ L GGK+IR +L L + Sbjct: 5 KNILQKIDEELKTYVDK---------DDKLYNASKHLLFAGGKRIRPYLAVVTYMLKKDD 55 Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128 L AA+E IH Y+LI MD+ RRGKPTVH+ + E AI+AG+ L AF Sbjct: 56 IEEVLPAAAAVELIHNYTLI--HDDIMDHDDERRGKPTVHVVFGEPMAILAGDLLYAKAF 113 Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186 E +S +KDN ++ +L + + + GQ +D++ E + + + + KTG Sbjct: 114 EAVSK----IKDNKKAHEVLKILSKACV-EVCEGQAMDMEFENYYPTMDEYLEMIRKKTG 168 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 AL+ + E GA+MA ++ E+ L+ + + +G+ FQ+ DD+LD D K Sbjct: 169 ALLEASVEIGAVMADCNEEERNALKEYAKRIGLTFQIQDDVLDLIGDEKK 218 >gi|304311022|ref|YP_003810620.1| Polyprenyl synthetase [gamma proteobacterium HdN1] gi|301796755|emb|CBL44967.1| Polyprenyl synthetase [gamma proteobacterium HdN1] Length = 322 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 15/218 (6%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75 +D I+ + + +QT D ++SA GGK++R LV + + Sbjct: 17 VDEIIRQQIQSKVALVQTIG-DYIISA------GGKRLRPLLVLLGGRAVGYHKEDLRIL 69 Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135 A IE +H +L+HDD+ +D +RRG+ T + Q+ +++ G+ L + +FE++ Sbjct: 70 AATIELLHTATLLHDDV--VDKSGLRRGRATANAQWGNAPSVLVGDYLYSRSFEMMVGLG 127 Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195 N+ +LS I +G Q+ ++D E I + KT L+ + S Sbjct: 128 -----NMPVMKILSQATRIMAEGEAL-QLSRVRDVSTSEETYMQIIRSKTSVLLEASSHS 181 Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233 A++A A+ E+ LR FGE+LGI FQL DD+LD D Sbjct: 182 AAVLASATDYERHALRGFGEHLGIAFQLIDDVLDFRGD 219 >gi|229495533|ref|ZP_04389266.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406] gi|229317516|gb|EEN83416.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406] Length = 334 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 16/233 (6%) Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65 + +Q+N I+T L L+ +H +TQ ++ L + + YA GG K++R LV A ++ Sbjct: 7 TTIQDNLSYIETELQTLV----AHCRTQISEPLYAPMAYAFEGGGKRVRPLLVLMVADMY 62 Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125 + ++ A+E H ++L+HDD+ MD+ +RR +P+V Q+ AI+ G+ +L+ Sbjct: 63 GKDRADFIKAALALEIYHNFTLLHDDV--MDHSEMRRNRPSVPAQFGIAQAILTGDAMLS 120 Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQK 182 A+++ L+ I N Q ++ GQ +D+ E + + + + Sbjct: 121 LAYKLTQEYPLALQPAI------MGVFNRMSQDIMVGQQMDMDFETRSDVTLAEYERMIR 174 Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235 KT L+ A E GA +A ++ L G N G+ FQL DD LD D Sbjct: 175 KKTAVLLSAALEIGAYIADTGMRDRSYLIRAGINAGMAFQLRDDYLDVYGDEA 227 >gi|332531718|ref|ZP_08407603.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332038694|gb|EGI75136.1| octaprenyl-diphosphate synthase / dimethylallyltransferase / geranyltranstransferase (farnesyldiphosphate synthase) / geranylgeranyl pyrophosphate synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 323 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 12/230 (5%) Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFN 66 ++ I++ ++D+ H Q + + L++ + Y + GGK++R L A Sbjct: 3 IKAIQALIESDMNDV--NQLIHAQMRSDVALVNQLGLYIVSSGGKRVRPMLAILAAKALG 60 Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126 + + +E IH +L+HDD+ +D +RRG PT + ++ +++ G+ + T Sbjct: 61 YQGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTANAEFGNAASVLVGDFIYTR 118 Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186 +F+++ ++ +L+ NI +G + Q+++ D E + KT Sbjct: 119 SFQLMVGLG-----KMQIMQVLADATNIIAEGEVL-QLMNCNDPDTTEASYMQVIYSKTA 172 Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236 L A AI+ Q + L +G +LG FQL DD+LD D + Sbjct: 173 KLFEAATGLAAIITEQDQATLDALNLYGMHLGTAFQLVDDVLDYNADAEQ 222 >gi|332799448|ref|YP_004460947.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1] gi|332697183|gb|AEE91640.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1] Length = 326 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 8/194 (4%) Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102 + GGK++R ++ A + + ++E IH ++IHDD+ +D+ IRR Sbjct: 41 MNMISSGGKRLRPAMLLAAARFGEYDFEIVRPLALSVELIHTATIIHDDI--VDDSPIRR 98 Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162 G ++ Q + A+ AG+ + FEI+++ +S + +G L Sbjct: 99 GVLSIQSQLGKDVAVYAGDYIFCKVFEILAASTYS-----NILEQVSKAMSQICEGELK- 152 Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222 Q D+ D + + KT L + + GA ++ A + L +G N+G+ FQ Sbjct: 153 QREDLFDTDLTFKDYLYRIQKKTAILFALSAQMGADVSKAPDKIIKALYSYGINIGMAFQ 212 Query: 223 LADDLLDCEEDLPK 236 + DDLLD D K Sbjct: 213 IIDDLLDFTGDYKK 226 >gi|270159180|ref|ZP_06187836.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968] gi|289165992|ref|YP_003456130.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] gi|269987519|gb|EEZ93774.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968] gi|288859165|emb|CBJ13094.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae NSW150] Length = 322 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 10/199 (5%) Query: 39 LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96 L+ + + ++ GGK++R LV ++ + + A +E H +L+HDD+ +D Sbjct: 31 LIDKMSHHMIESGGKRLRPLLVLLTSNACGYQGQDHIDLAAMVEFFHTATLLHDDV--ID 88 Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156 +RRG+ T + + +I+ G+ L T + E++ + ++ L ++ Sbjct: 89 ESTLRRGRQTANNIWGSKASILVGDYLFTQSIELMVDINNPEVLKLFARTALEIS----- 143 Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216 G + Q+ + + + + F + + KT L A G I++++S+ + L +G + Sbjct: 144 CGEVK-QLTNRHNPALTFEEYFDVIRAKTALLFAAAACIGPILSNSSKEMQNALYAYGLH 202 Query: 217 LGIIFQLADDLLDCEEDLP 235 LG FQL DD LD D Sbjct: 203 LGNAFQLIDDALDYCSDAK 221 >gi|186682243|ref|YP_001865439.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102] gi|186464695|gb|ACC80496.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102] Length = 323 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 13/221 (5%) Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71 ++ L LL + + L +A + GGK+IR +V + + Sbjct: 11 VEADL-RLLADNLKQLVGNRHPILFAAAEHLFGAGGKRIRPAIVLLISRATMLEQDITPR 69 Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131 R+ E IH SL+HDD+ +D +RRG PTVH + AI+AG+ L + + Sbjct: 70 HRRLAEITEMIHTASLVHDDV--VDESDVRRGVPTVHSLFGNRIAILAGDFLFAQSSWYL 127 Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191 ++ + S++++ L Q L+ D I KT +L+ Sbjct: 128 ANLDNLEVVKLLSEVIMDLATGEI------QQGLNRFDAGISIETYLQKSYYKTASLIAN 181 Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232 + ++ +++ S+ E L +G + GI FQ+ DD+LD Sbjct: 182 SSKAAGLLSEVSRETVEHLYSYGRHFGIAFQIVDDILDFTS 222 >gi|242242749|ref|ZP_04797194.1| trans-hexaprenyltranstransferase [Staph