PSIBLAST alignment of GI: 254781111 and protein with PDB id: 1rqj

gi|46015527|pdb|1RQJ|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Risedronate Length = 299
>gi|46015528|pdb|1RQJ|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase Bound To Isopentyl Pyrophosphate And Risedronate Length = 299
 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238