PSIBLAST alignment of GI: 254781111 and protein with PDB id: 1zw5
>gi|71042523|pdb|1ZW5|A Chain A, X-Ray Structure Of Farnesyl Diphosphate Synthase Protein Length = 355
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 72/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 3 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 62
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 63 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 122
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 123 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 182
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 183 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 242
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 243 IQDDYLDLFGDPSVTGK 259