PSIBLAST alignment of GI: 254781111 and protein with PDB id: 3p8r
>gi|310689999|pdb|3P8R|A Chain A, Crystal Structure Of Polyprenyl Synthase From Vibrio Cholerae Length = 302
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 85/238 (35%), Positives = 121/238 (50%), Gaps = 14/238 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 11 EALSSYQQRNNQQLDQWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVYIT 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+
Sbjct: 62 GQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGD 121
Query: 122 GLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
L T AF I++ R ++ +L G QGM GQ L ++ I ++
Sbjct: 122 ALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELE 181
Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 182 TIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 239