RPSBLAST alignment for GI: 254781111 and conserved domain: COG0142

>gnl|CDD|30491 COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]. Length = 322
 Score =  171 bits (435), Expect = 1e-43
 Identities = 90/236 (38%), Positives = 129/236 (54%), Gaps = 23/236 (9%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L +   RI+ +L +LL            + LL A+RY LL GGK++R  LV   A 
Sbjct: 3   LLALLLKRLARIEELLSELL-------SGSDPELLLEAMRYLLLAGGKRLRPLLVLLAAE 55

Query: 64  LFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              ++  T    AL + AAIE IH  SLIHDDL  MD+  +RRGKPTVH ++ E TAI+A
Sbjct: 56  ALGIDLETGGNDALDLAAAIELIHTASLIHDDL--MDDDDLRRGKPTVHAKFGEATAILA 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LL  AFE++S   ++  + I++           + G+ GGQ LD+  E   +   + 
Sbjct: 114 GDALLAAAFELLSKLGSEALEAIKAL-------AEAINGLCGGQALDLAFENKPVTLEEY 166

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             + ++KT AL   A   GAI+A A +   E L  +G NLG+ FQ+ DD+LD   D
Sbjct: 167 LRVIELKTAALFAAAAVLGAILAGADEELLEALEDYGRNLGLAFQIQDDILDITGD 222