RPSBLAST alignment for GI: 254781111 and conserved domain: COG0142
>gnl|CDD|30491 COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]. Length = 322
Score = 171 bits (435), Expect = 1e-43
Identities = 90/236 (38%), Positives = 129/236 (54%), Gaps = 23/236 (9%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + L + RI+ +L +LL + LL A+RY LL GGK++R LV A
Sbjct: 3 LLALLLKRLARIEELLSELL-------SGSDPELLLEAMRYLLLAGGKRLRPLLVLLAAE 55
Query: 64 LFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
++ T AL + AAIE IH SLIHDDL MD+ +RRGKPTVH ++ E TAI+A
Sbjct: 56 ALGIDLETGGNDALDLAAAIELIHTASLIHDDL--MDDDDLRRGKPTVHAKFGEATAILA 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
G+ LL AFE++S ++ + I++ + G+ GGQ LD+ E + +
Sbjct: 114 GDALLAAAFELLSKLGSEALEAIKAL-------AEAINGLCGGQALDLAFENKPVTLEEY 166
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ ++KT AL A GAI+A A + E L +G NLG+ FQ+ DD+LD D
Sbjct: 167 LRVIELKTAALFAAAAVLGAILAGADEELLEALEDYGRNLGLAFQIQDDILDITGD 222