RPSBLAST alignment of GI: 254781111 and protein with PDBid: 1rtr

 Score = 92.0 bits (227), Expect = 9e-20
 Identities = 90/229 (39%), Positives = 126/229 (55%), Gaps = 10/229 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
            + +    ++  L   + ++        + +L  ++ Y+L  GGK+IR  L+       N
Sbjct: 5   PMNKLIDEVNNELSVAINKSVM------DTQLEESMLYSLNAGGKRIRPVLLLLTLDSLN 58

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             +   ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT 
Sbjct: 59  TEYELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTK 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
           AFE+ISS      +     L   L+   G  GM+GGQMLD+Q   + ID   + MI K K
Sbjct: 119 AFELISSDDRLTDEVKIKVLQR-LSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTK 177

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TGAL+ FA  S A +A+     KE L  +  +LG++FQ+ DDLLDC  D
Sbjct: 178 TGALLTFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGD 226