RPSBLAST alignment of GI: 254781111 and protein with PDBid: 1v4e
>1v4e_A Octoprenyl-diphosphate synthase; trans-type prenyltransferase, thermophilic; 2.28A {Thermotoga maritima} SCOP: a.128.1.1 PDB: 1v4j_A 1wkz_A 1vg2_A 1wl3_A 1wl0_A 1wl2_A 1v4h_A 1v4i_A 1v4k_A 2azl_A 1wl1_A 1vg4_A 1vg3_A 1vg6_A 1vg7_A Length = 299
Score = 63.1 bits (152), Expect = 5e-11
Identities = 51/227 (22%), Positives = 89/227 (39%), Gaps = 27/227 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPEQIMK--------------DLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A+ AA+E +H SL+HDD+ +D RRGK T++ Y + A+ AG+ +L
Sbjct: 58 EIGEDAISSLAALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF + ++ ++ + + I + + I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAFLNVIGKMSEAE-------LIEQLSRYKPITKEEYLRIVEGKSG 168
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
AL A + A++ E L G +G I+Q+ DD++D
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAGM 212