RPSBLAST alignment of GI: 254781111 and protein with PDBid: 1wmw

>1wmw_A Geranylgeranyl diphosphate synthetase; GGPP, prenyl diphosphate synthase, structural genomics; 1.55A {Thermus thermophilus HB8} Length = 330

 Score = 76.3 bits (186), Expect = 6e-15
 Identities = 43/222 (19%), Positives = 71/222 (31%), Gaps = 9/222 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
           + I   L + LL      +  H D L    ++     GGK +R  L    A         
Sbjct: 6   EAIRQALQERLLA-----RLDHPDPLYRDLLQDYPRRGGKMLRGLLTVYSALAHGAPLEA 60

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L    A+E    + L+HDD    D    RRG+P +H  +    A+ AG+ +    + ++
Sbjct: 61  GLEAATALELFQNWVLVHDD--IEDGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLL 118

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +    +        L           G     +  +   F    + +        A    
Sbjct: 119 AEGLARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTA 178

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                     A +         G  LG  FQ+ DD+L+ E  
Sbjct: 179 VAPLRLGALLAGKTPPAAYEEGGLRLGTAFQIVDDVLNLEGG 220