RPSBLAST alignment of GI: 254781111 and protein with PDBid: 2j1p

>2j1p_A Geranylgeranyl pyrophosphate synthetase; transferase, isoprene biosynthesis, multifunctional enzyme, carotenoid biosynthesis; HET: GRG; 1.8A {Sinapis alba} PDB: 2j1o_A Length = 293
 Score =  115 bits (289), Expect = 8e-27
 Identities = 78/234 (33%), Positives = 120/234 (51%), Gaps = 14/234 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S +   +  ++  LD  +         +   ++  A+RY+LL GGK++R  L      L 
Sbjct: 15  SYIIRKADSVNKALDSAV-------PLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELV 67

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+ LL+
Sbjct: 68  GGEESLAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLS 127

Query: 126 YAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFM 179
           +AFE   S+  +++      + +  L   IG +G++ GQ++DI  E      +    +  
Sbjct: 128 FAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKF 187

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I   KT AL+  +   G I+   S  E ERLR F   +G++FQ+ DD+LD  + 
Sbjct: 188 IHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKS 241