RPSBLAST alignment of GI: 254781111 and protein with PDBid: 3dyh

>3dyh_A Farnesyl pyrophosphate synthase; protein-bisphosphonate complex, isoprene biosynthesis, transferase; HET: 721; 1.94A {Trypanosoma brucei} PDB: 2ewg_A* 2i19_A* 2p1c_A* 3dyf_A* 3dyg_A* 2ogd_A* 3efq_A* 3egt_A* Length = 390

 Score = 98.1 bits (243), Expect = 2e-21
 Identities = 42/233 (18%), Positives = 66/233 (28%), Gaps = 38/233 (16%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-----------------ALRVGAAI 79
             L   +    LGGK  R   V + A                          A   G  I
Sbjct: 56  RYLRKMMDTTCLGGKYNRGLTVIDVAESLLSLSPNNNGEEDDGARRKRVLHDACVCGWMI 115

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +  + L+ DD+  MDN   RRGKP  +   D        +GLL  ++  + +      
Sbjct: 116 EFLQAHYLVEDDI--MDNSVTRRGKPCWYRHPDVTVQCAINDGLLLKSWTHMMAMHFFAD 173

Query: 140 DNIRSQLM---------LSLTHNIGLQGMLGGQMLDIQDEF--------IDETQVFMIQK 182
                 L+          ++     +  M     LD                +    I K
Sbjct: 174 RPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQPTTTDFAEFTLSNYKRIVK 233

Query: 183 MKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233
            KT            ++   +               +G  FQ+ DD++DC   
Sbjct: 234 YKTAYYTYLLPLVMGLIVSEALPTVDMGVTEELAMLMGEYFQVQDDVMDCFTP 286