HHsearch alignment for GI: 254781112 and conserved domain: KOG1052
>KOG1052 consensus.
Probab=99.57 E-value=8.1e-14 Score=105.14 Aligned_cols=226 Identities=25% Similarity=0.358 Sum_probs=156.9
Q ss_pred CCCEEEEECCCCCCEEEEEEC-----CCCCEEEEEEEEHHHHHHHCCCCCCCCCC-----------CHHHHHHHHHCCCC
Q ss_conf 895899962899872487046-----99848898852167899762998555668-----------98898864310322
Q gi|254781112|r 40 QSALRVGTDGIYPPHSFHAQD-----GRGELTGFDIDLIKEVAHRLNLKVEFFET-----------AVSGLITGLDTNRY 103 (274)
Q Consensus 40 ~~~l~v~~~~~~pP~~~~~~d-----~~g~~~G~~~dl~~~i~~~lg~~~~~~~~-----------~~~~~~~~l~~g~~ 103 (274)
T Consensus 215 ~~~l~v~~~~~-~P~~~~~~~~~~~~~~~~~~G~~idll~~l~~~l~f~~~~~~~~~~~g~~~~~g~~~g~v~~l~~~~a 293 (656)
T KOG1052 215 GKPLRVGVVTE-PPFVDLVEDLAILNGNDRIEGFEIDLLQALAKRLNFSYEIIFVPDGSGSRDPNGNWDGLVGQLVDGEA 293 (656)
T ss_pred CCEEEEEEECC-CCCEEEECCCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCE
T ss_conf 95379987715-89525630433457776401260999999998769758999625788886888876789999971813
Q ss_pred CCCHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC-------------------------------------------
Q ss_conf 1100003675675420023332222222221112222-------------------------------------------
Q gi|254781112|r 104 DVLVNVAITPERQKKYDFSIPYIAHRVLLVVRSDQQD------------------------------------------- 140 (274)
Q Consensus 104 D~~~~~~~t~eR~~~~~fs~p~~~~~~~~~~~~~~~~------------------------------------------- 140 (274)
T Consensus 294 dvg~~~tit~~R~~~vdfT~p~~~~~~~i~~~~~~~~~~~~~fl~Pf~~~vW~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 373 (656)
T KOG1052 294 DVGADITITPERSKYVDFTIPYLQFGIVIIVRKPDSRSKLWNFLAPFSPEVWLLILASLLLVGLLLWILERLSPYELPPR 373 (656)
T ss_pred EEEECEEECCCHHHCEEECCEEEECCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 00103176002030053213287545799998267420177874667189999999999999999987753044113543
Q ss_pred --------------------------------------------------------------------CCCCCCCC---C
Q ss_conf --------------------------------------------------------------------11111233---4
Q gi|254781112|r 141 --------------------------------------------------------------------IRSFKDLT---D 149 (274)
Q Consensus 141 --------------------------------------------------------------------~~~~~dL~---g 149 (274)
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~p~~~~~Rll~~~w~~~~lil~ssYTa~L~a~Lt~~~~~~~i~~~~dL~~~~~ 453 (656)
T KOG1052 374 QIVTSLFSLLNCLWLTVGSLLQQGSDEIPRSLSTRLLLGAWWLFVLILISSYTANLTAFLTVPRLRSPIDSLDDLADQSN 453 (656)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHCC
T ss_conf 23121123667789988765512565466307799999999999999998755732301451567887357999987508
Q ss_pred CCEEEECCCHHHHHHHCC-------CC-CCEEECCHHHHHHHHHHHH---HHCCCCCHHHHHHHHHHCCCCCCCEEECCC
Q ss_conf 320231010122332013-------45-4213368557777554432---100366558999999845876673262367
Q gi|254781112|r 150 KTVAQILGTDLSRFAKEL-------KS-HLVFSHNFEQSLQLLLSKR---TDATMIPDIPFFNFLERRPHDGNLFKIADR 218 (274)
Q Consensus 150 ~~V~~~~g~~~~~~l~~~-------~~-~~~~~~~~~~~~~~l~~gr---vD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (274)
T Consensus 454 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~--~c~~~~v~~ 530 (656)
T KOG1052 454 IPYGTQRGSFTRIYLEESEDMWAFKVSQRSVPLASPEEGVERVRKGPSGGYA-FASDELYLAYLFLRDE--ICDLTEVGE 530 (656)
T ss_pred CCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEE-EEECHHHHHHHHHHCC--CCCEEEECC
T ss_conf 7710233605678776527765332146554568999999999669987679-9941377999986236--862488066
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 7687707999818998999999999999997985999998767888775689877
Q gi|254781112|r 219 MKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKNIISSVPGCS 273 (274)
Q Consensus 219 ~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~~G~~~~I~~kw~g~d~~~~~~~~~ 273 (274)
T Consensus 531 ~~~~~~~~-~~~~~Sp-l~~~is~~Il~l~e~g~l~~~~~kw~~~~~~--~~~~~ 581 (656)
T KOG1052 531 PFLYKGYG-AFPKGSP-LRSLISRAILKLQETGILQKLKRKWFSKKPC--LPKCS 581 (656)
T ss_pred CCCCCCEE-EECCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCC
T ss_conf 45657645-7618983-4788749999856517999999998525776--76555