HHsearch alignment for GI: 254781112 and conserved domain: PRK04168

>PRK04168 hypothetical protein; Provisional.
Probab=95.63  E-value=0.043  Score=32.59  Aligned_cols=211  Identities=15%  Similarity=0.153  Sum_probs=100.1

Q ss_pred             HHHHCCCEEEEECCCC-CCEEEEEECCCCCEEEEEEEEHHHHHHH-CCCCCCCCCCCHHHHHHHHH--CCCCCCCHHCCC
Q ss_conf             7885895899962899-8724870469984889885216789976-29985556689889886431--032211000036
Q gi|254781112|r   36 RTEDQSALRVGTDGIY-PPHSFHAQDGRGELTGFDIDLIKEVAHR-LNLKVEFFETAVSGLITGLD--TNRYDVLVNVAI  111 (274)
Q Consensus        36 ~~~~~~~l~v~~~~~~-pP~~~~~~d~~g~~~G~~~dl~~~i~~~-lg~~~~~~~~~~~~~~~~l~--~g~~D~~~~~~~  111 (274)
T Consensus        28 ~~~~~~~l~Vf~AGSL~~pf~---------------ei~~~Fe~~~p~v~v~~e~~GS~~~ar~Ite~g~~aDVfaSAD~   92 (336)
T PRK04168         28 EAEPPGKLKIFHAGSLSVPFE---------------EYEKEFEAYYPNVDVQREAGGSVACVRKITELGKPADILASADY   92 (336)
T ss_pred             CCCCCEEEEEEECCCCHHHHH---------------HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEECCH
T ss_conf             778861599997552589999---------------99999998789965999847389999999957999888998985


Q ss_pred             CHHHHH----HHCCCCCCCCCCCCCCCCCCCC---CC--CCCCC-C--CCCCEEE------ECCCH--------------
Q ss_conf             756754----2002333222222222111222---21--11112-3--3432023------10101--------------
Q gi|254781112|r  112 TPERQK----KYDFSIPYIAHRVLLVVRSDQQ---DI--RSFKD-L--TDKTVAQ------ILGTD--------------  159 (274)
Q Consensus       112 t~eR~~----~~~fs~p~~~~~~~~~~~~~~~---~~--~~~~d-L--~g~~V~~------~~g~~--------------  159 (274)
T Consensus        93 ~~i~~ll~p~~adw~v~FA~N~lViayt~~Sk~a~ei~~~nWyeiL~~~~Vk~g~sdP~~DP~Gyrt~~~~~LAe~~Y~~  172 (336)
T PRK04168         93 TLIPKMMIPEYADWYVMFATNEIVLAYTDKSKYADEINSDNWYEILQRPGVKWGFSDPNDDPCGYRSLMVLQLAELYYND  172 (336)
T ss_pred             HHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             78788746443341012115538999768882110057331889857798579837998898608999999999986068


Q ss_pred             ---HHHHHHCC-------------------CCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH---CCCCCC---
Q ss_conf             ---22332013-------------------45421336855777755443210036655899999984---587667---
Q gi|254781112|r  160 ---LSRFAKEL-------------------KSHLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLER---RPHDGN---  211 (274)
Q Consensus       160 ---~~~~l~~~-------------------~~~~~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~---~~~~~~---  211 (274)
T Consensus       173 pgl~~~l~~~~~n~~~~~~~i~~p~~~~~n~~k~~~rp~e~~Ll~~lesG~~Dy~f~Y~S~A~q~~L~yv~LP~eINL~~  252 (336)
T PRK04168        173 PTIYDKLVLKNTNFYVNGTYIRSPKEILVNRPKIFVRPKEVELLGLLETGAMDYLFIYKSVAVQHNLKYIELPDEINLGD  252 (336)
T ss_pred             CCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCEECCCHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCCHHHCCCC
T ss_conf             41788886403553345422356043114554311055267777787558864698762448676997003833314678


Q ss_pred             ----------CEEECCC----CCCCCCEEEEEECC--CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
Q ss_conf             ----------3262367----76877079998189--9899999999999999798599999876788877
Q gi|254781112|r  212 ----------LFKIADR----MKDNSAVAFMMRKG--NNKLTRSINEILCAIHLDGTYKKIFDRYFDKNII  266 (274)
Q Consensus       212 ----------~~~~~~~----~~~~~~~~~~~~k~--~~~L~~~in~~l~~l~~~G~~~~I~~kw~g~d~~  266 (274)
T Consensus       253 ~~~ad~Y~~vsv~v~~~~~t~~g~PIvY~iTV~~~A~n~e~A~~FV~fll----s~~Gq~il~~-~G~~p~  318 (336)
T PRK04168        253 YSYADFYKKVSVTLTGKKPTITAKPIVYGITVPKNAPNREAAIEFLKYLL----DEGGPKIFEN-NGQPPI  318 (336)
T ss_pred             CCCCCCCCEEEEEECCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHH----CCHHHHHHHH-CCCCCC
T ss_conf             11002010589997178751214766898764689999899999999984----8025899997-599987