HHsearch alignment for GI: 254781112 and conserved domain: PRK09508
>PRK09508 leuO leucine transcriptional activator; Reviewed.
Probab=91.59 E-value=1.1 Score=24.02 Aligned_cols=155 Identities=9% Similarity=0.105 Sum_probs=86.0
Q ss_pred EEHHHHHHHC-CCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC---CCCC
Q ss_conf 2167899762-99855566898898864310322110000367567542002333222222222111222211---1112
Q gi|254781112|r 71 DLIKEVAHRL-NLKVEFFETAVSGLITGLDTNRYDVLVNVAITPERQKKYDFSIPYIAHRVLLVVRSDQQDIR---SFKD 146 (274)
Q Consensus 71 dl~~~i~~~l-g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~t~eR~~~~~fs~p~~~~~~~~~~~~~~~~~~---~~~d 146 (274)
T Consensus 129 ~ll~~~~~~~P~v~l~~~~~~~~~~~~~L~~g~iDl~I~~~~~~--~~~~-~~~~L~~d~~v~v~~~~HP~~~~~lt~~~ 205 (314)
T PRK09508 129 QIYNRIEQIAPNIHLVFKSSLNQNIEHQLRYQETEFVISYEEFD--RPEF-TSVPLFKDELVLVASKNHPRIKGPILEEQ 205 (314)
T ss_pred HHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEECCCCC--CCCC-EEEEEEECCEEEEECCCCCCCCCCCCHHH
T ss_conf 99999998689977999857706499999769952999678779--9873-48999724649998299976789999999
Q ss_pred CCCCCEEEE--CCC--HHHHHHHCCCC--C-CEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCC
Q ss_conf 334320231--010--12233201345--4-2133685577775544321003665589999998458766732623677
Q gi|254781112|r 147 LTDKTVAQI--LGT--DLSRFAKELKS--H-LVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRM 219 (274)
Q Consensus 147 L~g~~V~~~--~g~--~~~~~l~~~~~--~-~~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (274)
T Consensus 206 ~~~~~hv~~s~~~~~~~~~~~l~~~~~~r~i~~~~~s~~~~~~lv~~td~i-a~lP~~~a~~~~~~~~l~---~~~lP~~ 281 (314)
T PRK09508 206 LYNEQHAVVSLDRFASFSQPWYDTVDKQASIAYQGMALSSVLNVVSQTHLV-AIAPRWLAEEFAESLELQ---ILPLPLK 281 (314)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCEE-EHHHHHHHHHHHHCCCCE---EECCCCC
T ss_conf 961998899639988589999995798631899958899999999839977-589999999864429957---9789989
Q ss_pred CCCCCEEEEEECC
Q ss_conf 6877079998189
Q gi|254781112|r 220 KDNSAVAFMMRKG 232 (274)
Q Consensus 220 ~~~~~~~~~~~k~ 232 (274)
T Consensus 282 ~~~~~~~l~WH~r 294 (314)
T PRK09508 282 NNSRTCYLSWHES 294 (314)
T ss_pred CCCEEEEEEECCC
T ss_conf 8873699997899