HHsearch alignment for GI: 254781112 and conserved domain: PRK09959

>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional.
Probab=100.00  E-value=5.7e-33  Score=223.59  Aligned_cols=223  Identities=16%  Similarity=0.207  Sum_probs=192.0

Q ss_pred             HHHHCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCC-CCHHHHHHHHHCCCCCCCHHCCCCHH
Q ss_conf             78858958999628998724870469984889885216789976299855566-89889886431032211000036756
Q gi|254781112|r   36 RTEDQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFE-TAVSGLITGLDTNRYDVLVNVAITPE  114 (274)
Q Consensus        36 ~~~~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~-~~~~~~~~~l~~g~~D~~~~~~~t~e  114 (274)
T Consensus       297 WL~~hP~irv~~~~~~aP~sf~--D~~G~~~Gi~aD~L~lIs~rtGL~Fe~v~~~~~~~~~~~l~~g~~D~l~~~~~s~~  374 (1197)
T PRK09959        297 WIKQHPDLKVLENPYSPPYSMT--DENGSVRGVMGDILNIITLQTGLNFSPITVSHNIHAGTQLNPGGWDILPGAIYSED  374 (1197)
T ss_pred             HHHHCCCEEEEECCCCCCEEEE--CCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCHHCCCCCCCCC
T ss_conf             9997897599717998994578--88997643279999999998796689983698799999987698122032357854


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHC--CCCCCEEECCHHHHHHHHHHHHHHCC
Q ss_conf             7542002333222222222111222211111233432023101012233201--34542133685577775544321003
Q gi|254781112|r  115 RQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLSRFAKE--LKSHLVFSHNFEQSLQLLLSKRTDAT  192 (274)
Q Consensus       115 R~~~~~fs~p~~~~~~~~~~~~~~~~~~~~~dL~g~~V~~~~g~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~grvD~~  192 (274)
T Consensus       375 r~~~l~fT~py~~~p~ViV~r~~~~~~~~l~--~gkrvai~~~~~~~~~l~~~yP~i~~v~v~s~~~al~~v~~G~aDa~  452 (1197)
T PRK09959        375 RENNVLFAEAFITTPYVFVMQKAPDSEQTLK--KGMKVAIPYYYELHSQLKEMYPEVEWIKVDNASAAFHKVKEGELDAL  452 (1197)
T ss_pred             CCCCCEECCCCCCCCEEEEEECCCCCCCCHH--CCCEEEECCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEE
T ss_conf             4346554132356875999963786301142--19889991785068999986898349980999999999977887667


Q ss_pred             CCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
Q ss_conf             665589999998458766732623677687707999818998999999999999997985999998767888
Q gi|254781112|r  193 MIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKN  264 (274)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~~G~~~~I~~kw~g~d  264 (274)
T Consensus       453 v~~l~~a~y~i~~~~~~~L~-~~~~~~~~~~~lafaV~~d~peL~sILnKaL~sIpp~-E~~~I~~rW~~~~  522 (1197)
T PRK09959        453 VATQLNSRYMIDHYYPNELY-HFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPS-EVLRLTEKWIKMP  522 (1197)
T ss_pred             EEHHHHHHHHHHHHCCCCCE-EEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHH-HHHHHHHHHCCCC
T ss_conf             42447789999874566504-8741587763269998799889999999999839999-9999998530467