HHsearch alignment for GI: 254781112 and conserved domain: PRK09959
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional.
Probab=100.00 E-value=5.7e-33 Score=223.59 Aligned_cols=223 Identities=16% Similarity=0.207 Sum_probs=192.0
Q ss_pred HHHHCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCC-CCHHHHHHHHHCCCCCCCHHCCCCHH
Q ss_conf 78858958999628998724870469984889885216789976299855566-89889886431032211000036756
Q gi|254781112|r 36 RTEDQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFE-TAVSGLITGLDTNRYDVLVNVAITPE 114 (274)
Q Consensus 36 ~~~~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~-~~~~~~~~~l~~g~~D~~~~~~~t~e 114 (274)
T Consensus 297 WL~~hP~irv~~~~~~aP~sf~--D~~G~~~Gi~aD~L~lIs~rtGL~Fe~v~~~~~~~~~~~l~~g~~D~l~~~~~s~~ 374 (1197)
T PRK09959 297 WIKQHPDLKVLENPYSPPYSMT--DENGSVRGVMGDILNIITLQTGLNFSPITVSHNIHAGTQLNPGGWDILPGAIYSED 374 (1197)
T ss_pred HHHHCCCEEEEECCCCCCEEEE--CCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCHHCCCCCCCCC
T ss_conf 9997897599717998994578--88997643279999999998796689983698799999987698122032357854
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHC--CCCCCEEECCHHHHHHHHHHHHHHCC
Q ss_conf 7542002333222222222111222211111233432023101012233201--34542133685577775544321003
Q gi|254781112|r 115 RQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLSRFAKE--LKSHLVFSHNFEQSLQLLLSKRTDAT 192 (274)
Q Consensus 115 R~~~~~fs~p~~~~~~~~~~~~~~~~~~~~~dL~g~~V~~~~g~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~grvD~~ 192 (274)
T Consensus 375 r~~~l~fT~py~~~p~ViV~r~~~~~~~~l~--~gkrvai~~~~~~~~~l~~~yP~i~~v~v~s~~~al~~v~~G~aDa~ 452 (1197)
T PRK09959 375 RENNVLFAEAFITTPYVFVMQKAPDSEQTLK--KGMKVAIPYYYELHSQLKEMYPEVEWIKVDNASAAFHKVKEGELDAL 452 (1197)
T ss_pred CCCCCEECCCCCCCCEEEEEECCCCCCCCHH--CCCEEEECCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEE
T ss_conf 4346554132356875999963786301142--19889991785068999986898349980999999999977887667
Q ss_pred CCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
Q ss_conf 665589999998458766732623677687707999818998999999999999997985999998767888
Q gi|254781112|r 193 MIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKN 264 (274)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~~G~~~~I~~kw~g~d 264 (274)
T Consensus 453 v~~l~~a~y~i~~~~~~~L~-~~~~~~~~~~~lafaV~~d~peL~sILnKaL~sIpp~-E~~~I~~rW~~~~ 522 (1197)
T PRK09959 453 VATQLNSRYMIDHYYPNELY-HFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPS-EVLRLTEKWIKMP 522 (1197)
T ss_pred EEHHHHHHHHHHHHCCCCCE-EEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHH-HHHHHHHHHCCCC
T ss_conf 42447789999874566504-8741587763269998799889999999999839999-9999998530467