HHsearch alignment for GI: 254781112 and conserved domain: PRK10677
>PRK10677 modA molybdate transporter periplasmic protein; Provisional.
Probab=98.05 E-value=7.6e-05 Score=49.65 Aligned_cols=202 Identities=12% Similarity=0.133 Sum_probs=116.3
Q ss_pred HHHHHCCCEEEEECCCC-CCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC-CCCCHHCCCC
Q ss_conf 87885895899962899-872487046998488988521678997629985556689889886431032-2110000367
Q gi|254781112|r 35 FRTEDQSALRVGTDGIY-PPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNR-YDVLVNVAIT 112 (274)
Q Consensus 35 ~~~~~~~~l~v~~~~~~-pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~~~~~~~~~~l~~g~-~D~~~~~~~t 112 (274)
T Consensus 21 ~~~a~~~~l~V~aAAsL~~~~~---------------ei~~~Fek~~g~~v~~~fgsSg~L~~QI~~GAp~DvF~sAd~~ 85 (257)
T PRK10677 21 NALADEGKITVFAAASLTNAMQ---------------DIATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQK 85 (257)
T ss_pred CCCCCCCEEEEEEECCCHHHHH---------------HHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCEEEECCHH
T ss_conf 3325688599999257689999---------------9999998841984999966489999999828996589978757
Q ss_pred -HHHH---HHHCCC--CCCCCCCCCCCCCCCCC----CCCCCCC----CCCCCEEEE------CCCHHHHHHHCC-----
Q ss_conf -5675---420023--33222222222111222----2111112----334320231------010122332013-----
Q gi|254781112|r 113 -PERQ---KKYDFS--IPYIAHRVLLVVRSDQQ----DIRSFKD----LTDKTVAQI------LGTDLSRFAKEL----- 167 (274)
Q Consensus 113 -~eR~---~~~~fs--~p~~~~~~~~~~~~~~~----~~~~~~d----L~g~~V~~~------~g~~~~~~l~~~----- 167 (274)
T Consensus 86 ~~~~l~~~~~i~~~~~~~~a~n~lvli~pk~~~~~~~~i~~~~d~~~ll~~~riaia~P~~aP~G~ya~~~L~~~gl~~~ 165 (257)
T PRK10677 86 WMDYAVDKKAIDTATRQTLLGNSLVVVAPKASEQKDFTIDKKTDWTSLLNGGRLAVGDPDHVPAGIYAKEALQKLGAWDT 165 (257)
T ss_pred HHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHH
T ss_conf 78999867785677645621474999984687778644343323777425880898588888657999999997676655
Q ss_pred -CCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECC--CHHHHHHHHHHH
Q ss_conf -45421336855777755443210036655899999984587667326236776877079998189--989999999999
Q gi|254781112|r 168 -KSHLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKG--NNKLTRSINEIL 244 (274)
Q Consensus 168 -~~~~~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~L~~~in~~l 244 (274)
T Consensus 166 l~~klv~~~nV~~~l~~v~~G~adaG~Vy~Sda~~----~~~~~~~~~~p~~~~~pi~y~~ai~~~~~~~~a-----~~F 236 (257)
T PRK10677 166 LSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVA----SKGVKVVATFPEDSHKKVEYPMAIVEGHNNATV-----SAF 236 (257)
T ss_pred HCCCEEECCCHHHHHHHHHCCCCCEEEEECCHHHC----CCCCEEEEECCHHHCCCCEEEEEEECCCCCHHH-----HHH
T ss_conf 06541325769999999982998789997000222----688649998774538961455899759999999-----999
Q ss_pred HHHHHCCHHHHHHHHH
Q ss_conf 9999798599999876
Q gi|254781112|r 245 CAIHLDGTYKKIFDRY 260 (274)
Q Consensus 245 ~~l~~~G~~~~I~~kw 260 (274)
T Consensus 237 ~~fl~S~~a~~Il~~~ 252 (257)
T PRK10677 237 YDYLKGPQAAEIFKRY 252 (257)
T ss_pred HHHHCCHHHHHHHHHH
T ss_conf 9997799999999982