HHsearch alignment for GI: 254781112 and conserved domain: PRK11119

>PRK11119 proX glycine betaine transporter periplasmic subunit; Provisional.
Probab=94.50  E-value=0.096  Score=30.48  Aligned_cols=116  Identities=13%  Similarity=0.081  Sum_probs=65.5

Q ss_pred             CCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCC-CCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHH
Q ss_conf             8958999628998724870469984889885216789976299855-566898898864310322110000367567542
Q gi|254781112|r   40 QSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVE-FFETAVSGLITGLDTNRYDVLVNVAITPERQKK  118 (274)
Q Consensus        40 ~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~-~~~~~~~~~~~~l~~g~~D~~~~~~~t~eR~~~  118 (274)
T Consensus        29 g~tV~~a~~-~W~~---------~---~a~t~v~~~~Le~lGY~Ve~~~~~~~~~~~~ala~GdiD~~~~~-WlP~~~~~   94 (332)
T PRK11119         29 GITVQPAQS-TIAE---------E---TFQTLLVSRALEKLGYDVNKPKEVDYNVFYTSIASGDATFTAVN-WFPLHDDQ   94 (332)
T ss_pred             CCEEEEEEC-CCHH---------H---HHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCCCEEEECC-CCCCCHHH
T ss_conf             977876016-8408---------9---99999999999986998542014446889999855884486556-17651799


Q ss_pred             H---------CCCCCCCCC-CCCCCCCC---CCCCCCCCCCCCC-------------C--CEEEECCCHHH----HHHHC
Q ss_conf             0---------023332222-22222111---2222111112334-------------3--20231010122----33201
Q gi|254781112|r  119 Y---------DFSIPYIAH-RVLLVVRS---DQQDIRSFKDLTD-------------K--TVAQILGTDLS----RFAKE  166 (274)
Q Consensus       119 ~---------~fs~p~~~~-~~~~~~~~---~~~~~~~~~dL~g-------------~--~V~~~~g~~~~----~~l~~  166 (274)
T Consensus        95 ~~~~~~~~~~~~~g~~~~ga~~G~~V~~~~~d~~~I~si~dLkdp~~a~~Fd~~~~GKg~i~g~~pGwg~~~~~~~~i~~  174 (332)
T PRK11119         95 YEAAGGDKKFYREGVIVGGAAQGYLIDKKTADKYNITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEAVINHQLKA  174 (332)
T ss_pred             HHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf             99732776476424335665136895023321148578998628678986076778850288148872066899999986


Q ss_pred             CCC
Q ss_conf             345
Q gi|254781112|r  167 LKS  169 (274)
Q Consensus       167 ~~~  169 (274)
T Consensus       175 ygL  177 (332)
T PRK11119        175 YGL  177 (332)
T ss_pred             CCC
T ss_conf             799