HHsearch alignment for GI: 254781112 and conserved domain: PRK12681

>PRK12681 cysB transcriptional regulator CysB; Reviewed.
Probab=96.16  E-value=0.067  Score=31.44  Aligned_cols=174  Identities=12%  Similarity=0.122  Sum_probs=103.7

Q ss_pred             HCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHC-CCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHH
Q ss_conf             589589996289987248704699848898852167899762-9985556689889886431032211000036756754
Q gi|254781112|r   39 DQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRL-NLKVEFFETAVSGLITGLDTNRYDVLVNVAITPERQK  117 (274)
Q Consensus        39 ~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~l-g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~t~eR~~  117 (274)
T Consensus        91 ~~G~L~Ia~~~t~a~~-------------~LP~~i~~F~~~~P~v~l~l~~~~~~~i~~~l~~g~~DlaI~~e-~~~~~~  156 (324)
T PRK12681         91 DKGSLYIATTHTQARY-------------ALPPVIKGFIKRYPRVSLHMHQGSPTQIAEAAAKGEADFAIATE-ALHLYD  156 (324)
T ss_pred             CCCEEEEEECHHHHHH-------------HHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCC-CCCCCC
T ss_conf             7634999853588887-------------72599999998789984465317879999999879987231246-666688


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCEEE-ECCCHH----HHHHHCCCC--C-CEEECCHHHHHHHHH
Q ss_conf             20023332222222221112222----11111233432023-101012----233201345--4-213368557777554
Q gi|254781112|r  118 KYDFSIPYIAHRVLLVVRSDQQD----IRSFKDLTDKTVAQ-ILGTDL----SRFAKELKS--H-LVFSHNFEQSLQLLL  185 (274)
Q Consensus       118 ~~~fs~p~~~~~~~~~~~~~~~~----~~~~~dL~g~~V~~-~~g~~~----~~~l~~~~~--~-~~~~~~~~~~~~~l~  185 (274)
T Consensus       157 d-l~~~P~~~~~~~vvvp~~HPLa~~~~itl~dL~~~plI~~~~g~~~R~~id~~f~~~g~~P~iv~e~~~~~~I~~~V~  235 (324)
T PRK12681        157 D-LIMLPCYHWNRSVVVPPDHPLAKKKKLTIEELAQYPLVTYVFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVR  235 (324)
T ss_pred             C-CEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHH
T ss_conf             7-468640003222457999965579999999986998596149982999999999988997607999898999999999


Q ss_pred             HHHHHCCCCCHHHHHHHHHHCCCCCCCEEE-CCCCCCCCCEEEEEECCC
Q ss_conf             432100366558999999845876673262-367768770799981899
Q gi|254781112|r  186 SKRTDATMIPDIPFFNFLERRPHDGNLFKI-ADRMKDNSAVAFMMRKGN  233 (274)
Q Consensus       186 ~grvD~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~  233 (274)
T Consensus       236 ~GlGV~-ilp~mA~-----~~~~d~~l~~~~~~~~f~~~~t~i~~r~g~  278 (324)
T PRK12681        236 LGLGVG-VIASMAV-----DPVADPDLVAIDASHLFAHSTTKIGFRRGT  278 (324)
T ss_pred             HCCEEE-ECHHHHC-----CCCCCCCEEEEECCCCCCCCEEEEEEECCC
T ss_conf             599139-7035551-----965578817843655677764799997997