HHsearch alignment for GI: 254781112 and conserved domain: PRK12683
>PRK12683 transcriptional regulator CysB-like protein; Reviewed.
Probab=96.79 E-value=0.044 Score=32.57 Aligned_cols=174 Identities=11% Similarity=0.147 Sum_probs=101.7
Q ss_pred HCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHC-CCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHH
Q ss_conf 589589996289987248704699848898852167899762-9985556689889886431032211000036756754
Q gi|254781112|r 39 DQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRL-NLKVEFFETAVSGLITGLDTNRYDVLVNVAITPERQK 117 (274)
Q Consensus 39 ~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~l-g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~t~eR~~ 117 (274)
T Consensus 91 ~~G~l~Ig~~~~~~~~-------------~lp~~l~~f~~~~P~v~i~l~~~~~~~~~~~L~~g~~Dl~i~~~~-~~~~~ 156 (308)
T PRK12683 91 DSGRLTVATTHTQARY-------------ALPKVVRQFTEVFPKVHLALRQGSPQEIAEMLLNGEADIGIATEA-LDREP 156 (308)
T ss_pred CCCEEEECCCCHHHHH-------------CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEECCCC-CCCCC
T ss_conf 7762420013201120-------------168466899987899669996078699999997799778806667-78887
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCEEEE-CCCHH----HHHHHCCCC---CCEEECCHHHHHHHHH
Q ss_conf 20023332222222221112222----111112334320231-01012----233201345---4213368557777554
Q gi|254781112|r 118 KYDFSIPYIAHRVLLVVRSDQQD----IRSFKDLTDKTVAQI-LGTDL----SRFAKELKS---HLVFSHNFEQSLQLLL 185 (274)
Q Consensus 118 ~~~fs~p~~~~~~~~~~~~~~~~----~~~~~dL~g~~V~~~-~g~~~----~~~l~~~~~---~~~~~~~~~~~~~~l~ 185 (274)
T Consensus 157 ~l-~~~~l~~~~~~lv~~~~hpla~~~~v~l~dl~~~p~I~~~~~~~~r~~i~~~~~~~g~~p~~~~e~~~~~~i~~~V~ 235 (308)
T PRK12683 157 DL-VSFPYYSWHHVVVVPKGHPLTGRENLTLEALAEYPIITYDQGFTGRSHIDQAFAEAGAVPDIVLTALDADVIKTYVE 235 (308)
T ss_pred CC-EEEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
T ss_conf 71-68761245158984699953369999999985999896189982999999999977999857999998999999999
Q ss_pred HHHHHCCCCCHHHHHHHHHHCCCCCCCEEE-CCCCCCCCCEEEEEECCC
Q ss_conf 432100366558999999845876673262-367768770799981899
Q gi|254781112|r 186 SKRTDATMIPDIPFFNFLERRPHDGNLFKI-ADRMKDNSAVAFMMRKGN 233 (274)
Q Consensus 186 ~grvD~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~ 233 (274)
T Consensus 236 ~g~Gi~-ilp~~~~~~~----~~~~-lv~l~~~~~~~~~~~~i~~rk~~ 278 (308)
T PRK12683 236 LGMGVG-IVAAMAYDPQ----RDTG-LVALDTQHLFEANTTRVALRRGA 278 (308)
T ss_pred HCCCHH-HHHHHHHHHH----HCCC-EEEEECCCCCCCCEEEEEECCCC
T ss_conf 798470-7899998788----6099-79998978876617999990968