HHsearch alignment for GI: 254781112 and conserved domain: PRK12684
>PRK12684 transcriptional regulator CysB-like protein; Reviewed.
Probab=96.84 E-value=0.021 Score=34.56 Aligned_cols=202 Identities=13% Similarity=0.121 Sum_probs=113.5
Q ss_pred HCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHC-CCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHH
Q ss_conf 589589996289987248704699848898852167899762-9985556689889886431032211000036756754
Q gi|254781112|r 39 DQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRL-NLKVEFFETAVSGLITGLDTNRYDVLVNVAITPERQK 117 (274)
Q Consensus 39 ~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~l-g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~t~eR~~ 117 (274)
T Consensus 91 ~~G~l~ig~~~s~~~-------------~~lp~~l~~f~~~~P~v~l~l~~~~~~~~~~~l~~g~~Dl~i~~~~~~~-~~ 156 (313)
T PRK12684 91 DQGNLTIATTHTQAR-------------YALPAAIAEFKKRYPKVRLSILQGSPTQIAEMVIHDQADLAIATEAIAD-YK 156 (313)
T ss_pred CCCEEECCHHHHHHH-------------HCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEEECCCCCCC-CC
T ss_conf 775141102455575-------------1594999999844898089997178899999997799665504357777-78
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCEEE-ECCCHH----HHHHHCCCC--C-CEEECCHHHHHHHHH
Q ss_conf 20023332222222221112222----11111233432023-101012----233201345--4-213368557777554
Q gi|254781112|r 118 KYDFSIPYIAHRVLLVVRSDQQD----IRSFKDLTDKTVAQ-ILGTDL----SRFAKELKS--H-LVFSHNFEQSLQLLL 185 (274)
Q Consensus 118 ~~~fs~p~~~~~~~~~~~~~~~~----~~~~~dL~g~~V~~-~~g~~~----~~~l~~~~~--~-~~~~~~~~~~~~~l~ 185 (274)
T Consensus 157 ~l-~~~~l~~~~~~~v~~~~hpla~~~~v~l~dL~~~p~I~~~~~~~~r~~i~~~~~~~g~~p~~~~e~~~~~~i~~~V~ 235 (313)
T PRK12684 157 EL-VSLPCYQWNHAVVVPPDHPLLERKPLTLEDLAQYPLITYDDAFAGRSKINKAFALRGLKPDIVLEAIDADVIKTYVE 235 (313)
T ss_pred CE-EEEEEEECCEEEEECCCCCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
T ss_conf 73-89980322168995389854469999999985999896289985899999999977998747999997999999999
Q ss_pred HHHHHCCCCCHHHHHHHHHHCCCCCCCEEE-CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
Q ss_conf 432100366558999999845876673262-367768770799981899899999999999999798599999876788
Q gi|254781112|r 186 SKRTDATMIPDIPFFNFLERRPHDGNLFKI-ADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDK 263 (274)
Q Consensus 186 ~grvD~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~~G~~~~I~~kw~g~ 263 (274)
T Consensus 236 ~GlGi-~ilP~~a~~----~~-~~~~L~~lp~~~~~~~~~~~v~~~k~~~-ls~~~r~FIe~l~e~-l~r~~~~~~~~~ 306 (313)
T PRK12684 236 LGLGV-GIVADMAFD----PE-RDRNLRAIPAGHLFGSNVTRVALKQGAY-LRGYVYTFIELFSPT-LNRKLVEQALKG 306 (313)
T ss_pred HCCCH-HHHHHHHHC----HH-HCCCEEEEECCCCCCCEEEEEEEECCCC-CCHHHHHHHHHHHHH-CCHHHHHHHHHC
T ss_conf 59857-255999846----76-3898799978467766059999979886-689999999998746-598999999837