HHsearch results for GI: 254781112 and protein with PDBid: 1i6a_A

>1i6a_A OXYR, hydrogen peroxide-inducible genes activator; OXYR regulatory domain, oxidized form, transcription; 2.30A {Escherichia coli} SCOP: c.94.1.1 PDB: 1i69_A
Probab=95.94  E-value=0.007  Score=36.16  Aligned_cols=197  Identities=15%  Similarity=0.276  Sum_probs=108.0

Q ss_pred             CCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHC-CCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHH
Q ss_conf             89589996289987248704699848898852167899762-99855566898898864310322110000367567542
Q gi|254781112|r   40 QSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRL-NLKVEFFETAVSGLITGLDTNRYDVLVNVAITPERQKK  118 (274)
Q Consensus        40 ~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~l-g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~t~eR~~~  118 (274)
                      +|+|+||+.+....+             +..+++..+.++. ++++++...+...+++.+.+|++|++.......  ...
T Consensus         4 ~G~lrIg~~~~~~~~-------------~lp~~l~~f~~~~P~v~i~i~~~~~~~l~~~l~~~~~d~~~~~~~~~--~~~   68 (219)
T 1i6a_A            4 SGPLHIGLIPTVGPY-------------LLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDAVILALVKE--SEA   68 (219)
T ss_dssp             CEEEEEEECTTTHHH-------------HHHHHHHHHHHHCTTEEEEEEECCHHHHHHHHHHTSCSEEEEECCGG--GTT
T ss_pred             EEEEEEEEEHHHHHH-------------HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHHHCCCCCC--CCC
T ss_conf             189999837779999-------------99999999999888968999988848888887536401010235532--345


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCEEEEC-CCHHH----HHHHCCCC---CCEEECCHHHHHHHHHH
Q ss_conf             0023332222222221112222----1111123343202310-10122----33201345---42133685577775544
Q gi|254781112|r  119 YDFSIPYIAHRVLLVVRSDQQD----IRSFKDLTDKTVAQIL-GTDLS----RFAKELKS---HLVFSHNFEQSLQLLLS  186 (274)
Q Consensus       119 ~~fs~p~~~~~~~~~~~~~~~~----~~~~~dL~g~~V~~~~-g~~~~----~~l~~~~~---~~~~~~~~~~~~~~l~~  186 (274)
                      + ...++......++++++++.    .-+++|+.+..+.... +....    ....+.+.   ....+++.+....++.+
T Consensus        69 ~-~~~~l~~~~~~~v~~~~hpla~~~~i~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~  147 (219)
T 1i6a_A           69 F-IEVPLFDEPMLLAIYEDHPWANREAVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAA  147 (219)
T ss_dssp             S-EEEEEEEEEEEEEEETTSGGGGCSCEEGGGGTTSEEECCTTTTCSSCTTSSCSSCTTSEEECTTTTSCHHHHHHHHHT
T ss_pred             C-CCCCCCCCCEEEEEECCCHHHCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
T ss_conf             3-234344553699992597111699989899804768984587531567778999738998704774899999999980


Q ss_pred             HHHHCCCCCHHHHHHHHHHCCCCCCCEEEC-CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH--CCHHHHHHH
Q ss_conf             321003665589999998458766732623-677687707999818998999999999999997--985999998
Q gi|254781112|r  187 KRTDATMIPDIPFFNFLERRPHDGNLFKIA-DRMKDNSAVAFMMRKGNNKLTRSINEILCAIHL--DGTYKKIFD  258 (274)
Q Consensus       187 grvD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~--~G~~~~I~~  258 (274)
                      |..=++ .+...+.    ..........+. ..+.....++++.+++.+ +...+...+..+++  ++.++++.+
T Consensus       148 g~gi~~-lp~~~~~----~~~~~~~l~~l~~~~~~~~~~~~lv~~~~~~-~~~~~~~~~~~lr~~~~~~~~~~~~  216 (219)
T 1i6a_A          148 GSGITL-LPALAVP----PERKRDGVVYLPAIKPEPRRTIGLVYRPGSP-LRSRYEQLAEAIRARMDGHFDKVLK  216 (219)
T ss_dssp             TSCBEE-EEGGGSC----SSSEETTEEEECEESSCCEEEEEEEECTTCT-THHHHHHHHHHHHHHHTTTTC----
T ss_pred             CCEEEE-ECHHHHH----HHHHCCCEEEEECCCCCCEEEEEEEEECCCC-CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             998999-0389997----5510798899988899853599999979196-7899999999999999876878862