HHsearch results for GI: 254781112 and protein with PDBid: 1i6a_A
>1i6a_A OXYR, hydrogen peroxide-inducible genes activator; OXYR regulatory domain, oxidized form, transcription; 2.30A {Escherichia coli} SCOP: c.94.1.1 PDB: 1i69_A
Probab=95.94 E-value=0.007 Score=36.16 Aligned_cols=197 Identities=15% Similarity=0.276 Sum_probs=108.0
Q ss_pred CCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHC-CCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHH
Q ss_conf 89589996289987248704699848898852167899762-99855566898898864310322110000367567542
Q gi|254781112|r 40 QSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRL-NLKVEFFETAVSGLITGLDTNRYDVLVNVAITPERQKK 118 (274)
Q Consensus 40 ~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~l-g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~t~eR~~~ 118 (274)
+|+|+||+.+....+ +..+++..+.++. ++++++...+...+++.+.+|++|++....... ...
T Consensus 4 ~G~lrIg~~~~~~~~-------------~lp~~l~~f~~~~P~v~i~i~~~~~~~l~~~l~~~~~d~~~~~~~~~--~~~ 68 (219)
T 1i6a_A 4 SGPLHIGLIPTVGPY-------------LLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDAVILALVKE--SEA 68 (219)
T ss_dssp CEEEEEEECTTTHHH-------------HHHHHHHHHHHHCTTEEEEEEECCHHHHHHHHHHTSCSEEEEECCGG--GTT
T ss_pred EEEEEEEEEHHHHHH-------------HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHHHCCCCCC--CCC
T ss_conf 189999837779999-------------99999999999888968999988848888887536401010235532--345
Q ss_pred HCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCEEEEC-CCHHH----HHHHCCCC---CCEEECCHHHHHHHHHH
Q ss_conf 0023332222222221112222----1111123343202310-10122----33201345---42133685577775544
Q gi|254781112|r 119 YDFSIPYIAHRVLLVVRSDQQD----IRSFKDLTDKTVAQIL-GTDLS----RFAKELKS---HLVFSHNFEQSLQLLLS 186 (274)
Q Consensus 119 ~~fs~p~~~~~~~~~~~~~~~~----~~~~~dL~g~~V~~~~-g~~~~----~~l~~~~~---~~~~~~~~~~~~~~l~~ 186 (274)
+ ...++......++++++++. .-+++|+.+..+.... +.... ....+.+. ....+++.+....++.+
T Consensus 69 ~-~~~~l~~~~~~~v~~~~hpla~~~~i~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~ 147 (219)
T 1i6a_A 69 F-IEVPLFDEPMLLAIYEDHPWANREAVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAA 147 (219)
T ss_dssp S-EEEEEEEEEEEEEEETTSGGGGCSCEEGGGGTTSEEECCTTTTCSSCTTSSCSSCTTSEEECTTTTSCHHHHHHHHHT
T ss_pred C-CCCCCCCCCEEEEEECCCHHHCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
T ss_conf 3-234344553699992597111699989899804768984587531567778999738998704774899999999980
Q ss_pred HHHHCCCCCHHHHHHHHHHCCCCCCCEEEC-CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH--CCHHHHHHH
Q ss_conf 321003665589999998458766732623-677687707999818998999999999999997--985999998
Q gi|254781112|r 187 KRTDATMIPDIPFFNFLERRPHDGNLFKIA-DRMKDNSAVAFMMRKGNNKLTRSINEILCAIHL--DGTYKKIFD 258 (274)
Q Consensus 187 grvD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~--~G~~~~I~~ 258 (274)
|..=++ .+...+. ..........+. ..+.....++++.+++.+ +...+...+..+++ ++.++++.+
T Consensus 148 g~gi~~-lp~~~~~----~~~~~~~l~~l~~~~~~~~~~~~lv~~~~~~-~~~~~~~~~~~lr~~~~~~~~~~~~ 216 (219)
T 1i6a_A 148 GSGITL-LPALAVP----PERKRDGVVYLPAIKPEPRRTIGLVYRPGSP-LRSRYEQLAEAIRARMDGHFDKVLK 216 (219)
T ss_dssp TSCBEE-EEGGGSC----SSSEETTEEEECEESSCCEEEEEEEECTTCT-THHHHHHHHHHHHHHHTTTTC----
T ss_pred CCEEEE-ECHHHHH----HHHHCCCEEEEECCCCCCEEEEEEEEECCCC-CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 998999-0389997----5510798899988899853599999979196-7899999999999999876878862