HHsearch results for GI: 254781112 and protein with PDBid: 1wdn_A
>1wdn_A GLNBP, glutamine binding protein; closed form, complex, peptide, complex (binding protein/peptide); 1.94A {Escherichia coli} SCOP: c.94.1.1 PDB: 1ggg_A
Probab=100.00 E-value=3.3e-41 Score=273.16 Aligned_cols=220 Identities=29% Similarity=0.456 Sum_probs=197.2
Q ss_pred CCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCH-HCCCCHHHHHH
Q ss_conf 89589996289987248704699848898852167899762998555668988988643103221100-00367567542
Q gi|254781112|r 40 QSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNRYDVLV-NVAITPERQKK 118 (274)
Q Consensus 40 ~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~~~~~~~~~~l~~g~~D~~~-~~~~t~eR~~~ 118 (274)
.++|+||++++||||+|.+ +|+++|+++|+++++++++|+++++++.+|++++..|++|++|+++ ++++|++|++.
T Consensus 2 ~k~l~v~~~~~~pP~~~~~---~g~~~G~~~dl~~~ia~~~g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~~t~~r~~~ 78 (226)
T 1wdn_A 2 DKKLVVATDTAFVPFEFKQ---GDLYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKA 78 (226)
T ss_dssp --CEEEEEESSBTTTBEEE---TTEEESHHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHTTSSSEEEEEEECCHHHHTT
T ss_pred CCEEEEEECCCCCCEEEEE---CCEEEEHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCHHHCCE
T ss_conf 9509999899978848811---9958887999999999996996699978999999998769986574421235413254
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCC--CCCCEEECCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 0023332222222221112222111112334320231010122332013--45421336855777755443210036655
Q gi|254781112|r 119 YDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLSRFAKEL--KSHLVFSHNFEQSLQLLLSKRTDATMIPD 196 (274)
Q Consensus 119 ~~fs~p~~~~~~~~~~~~~~~~~~~~~dL~g~~V~~~~g~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~grvD~~~~~~ 196 (274)
+.||.||+..+..++++++...+++++||+|++||+..|+.+..+++.. ..++..+.+..+++.++.+||+|+++.+.
T Consensus 79 ~~fs~p~~~~~~~~~~~~~~~~~~~~~dl~g~~v~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~vD~~i~~~ 158 (226)
T 1wdn_A 79 IDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDT 158 (226)
T ss_dssp SEECSCCEEEEEEEEEETTCCSCSSSTTTTTCEEEEETTSHHHHHHHHHCCCSEEEEESSHHHHHHHHHTTSCSEEEEEH
T ss_pred EEECCCEEEEEEEEEEECCCCCCCCHHHHCCCEEEEECCCCCCCHHHHHCCCCCEEEECCHHHHHHHHHCCCEEEEEECC
T ss_conf 88245569977799999999999997995899999987866420123430355236507789999887458468999161
Q ss_pred HHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
Q ss_conf 89999998458766732623677687707999818998999999999999997985999998767888
Q gi|254781112|r 197 IPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKN 264 (274)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~~G~~~~I~~kw~g~d 264 (274)
..+.+++++.+... ..+...+....++++++++++++|++.||++|++|++||++++|++||||.|
T Consensus 159 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~l~~~~n~~l~~l~~~G~~~~i~~kylg~d 224 (226)
T 1wdn_A 159 PNILYFIKTAGNGQ--FKAVGDSLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYKKWFGTE 224 (226)
T ss_dssp HHHHHHHHTTTTTT--EEEEEEEEEEEEEEEEECTTCHHHHHHHHHHHHHHHHTSHHHHHHHHHHSSC
T ss_pred HHHHHHHHHCCCCC--EEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
T ss_conf 88888876415674--0551556777618999979999999999999999997969999999875999